Query psy10285
Match_columns 673
No_of_seqs 489 out of 5131
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 22:32:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10285.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10285hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1y56_B Sarcosine oxidase; dehy 100.0 4E-40 1.4E-44 355.6 39.3 373 243-673 4-381 (382)
2 3nyc_A D-arginine dehydrogenas 100.0 5.3E-40 1.8E-44 353.9 38.7 364 243-662 8-380 (381)
3 2gf3_A MSOX, monomeric sarcosi 100.0 8.2E-39 2.8E-43 345.9 34.8 375 244-672 3-389 (389)
4 2gag_B Heterotetrameric sarcos 100.0 1.9E-37 6.4E-42 337.1 39.2 373 242-673 19-401 (405)
5 3axb_A Putative oxidoreductase 100.0 2.9E-37 9.9E-42 340.6 29.7 381 243-667 22-447 (448)
6 2oln_A NIKD protein; flavoprot 100.0 3.5E-36 1.2E-40 326.6 37.4 366 244-665 4-392 (397)
7 2uzz_A N-methyl-L-tryptophan o 100.0 2.6E-36 9E-41 324.3 33.0 358 244-662 2-372 (372)
8 1ryi_A Glycine oxidase; flavop 100.0 6.6E-36 2.3E-40 322.4 29.9 360 243-665 16-381 (382)
9 3ps9_A TRNA 5-methylaminomethy 100.0 1.5E-34 5.1E-39 334.8 33.5 364 243-672 271-673 (676)
10 3pvc_A TRNA 5-methylaminomethy 100.0 9.5E-35 3.2E-39 336.9 31.7 364 243-672 263-677 (689)
11 1pj5_A N,N-dimethylglycine oxi 100.0 2.3E-33 7.8E-38 332.0 37.9 367 243-665 3-397 (830)
12 3dje_A Fructosyl amine: oxygen 100.0 1.7E-33 5.9E-38 309.5 31.1 360 243-661 5-398 (438)
13 3dme_A Conserved exported prot 100.0 1.1E-32 3.6E-37 295.1 35.2 348 244-644 4-368 (369)
14 3g3e_A D-amino-acid oxidase; F 100.0 4.6E-31 1.6E-35 281.5 17.6 316 245-647 1-334 (351)
15 3c4n_A Uncharacterized protein 100.0 3.9E-29 1.3E-33 272.0 23.2 325 243-647 35-398 (405)
16 1c0p_A D-amino acid oxidase; a 100.0 8.2E-29 2.8E-33 265.3 22.3 319 243-645 5-356 (363)
17 2rgh_A Alpha-glycerophosphate 99.9 1.1E-23 3.9E-28 238.3 39.3 346 244-645 32-410 (571)
18 2qcu_A Aerobic glycerol-3-phos 99.9 4E-24 1.4E-28 238.7 33.3 345 244-646 3-372 (501)
19 3da1_A Glycerol-3-phosphate de 99.9 8.3E-23 2.8E-27 230.7 30.0 350 243-645 17-390 (561)
20 3cgv_A Geranylgeranyl reductas 99.4 1.1E-11 3.6E-16 133.4 22.2 204 401-644 96-312 (397)
21 2v3a_A Rubredoxin reductase; a 99.4 9.4E-12 3.2E-16 133.7 18.9 61 411-490 191-253 (384)
22 3lxd_A FAD-dependent pyridine 99.3 1E-10 3.4E-15 127.1 23.9 62 411-490 198-261 (415)
23 3gwf_A Cyclohexanone monooxyge 99.3 8.8E-12 3E-16 139.7 15.8 37 242-281 176-212 (540)
24 3urh_A Dihydrolipoyl dehydroge 99.3 2.3E-12 7.7E-17 143.3 10.8 36 98-136 23-58 (491)
25 4b1b_A TRXR, thioredoxin reduc 99.3 1.1E-12 3.7E-17 146.6 7.7 34 100-136 42-75 (542)
26 3o0h_A Glutathione reductase; 99.3 4.7E-12 1.6E-16 140.4 12.7 35 100-137 26-60 (484)
27 1mo9_A ORF3; nucleotide bindin 99.3 1.5E-11 5.2E-16 137.6 16.5 66 412-491 260-328 (523)
28 3uox_A Otemo; baeyer-villiger 99.3 1.7E-11 5.9E-16 137.5 16.9 37 242-281 183-219 (545)
29 4ap3_A Steroid monooxygenase; 99.3 1.4E-11 4.6E-16 138.5 15.8 37 242-281 189-225 (549)
30 3fg2_P Putative rubredoxin red 99.3 1.5E-10 5E-15 125.3 22.6 62 411-490 188-251 (404)
31 4gcm_A TRXR, thioredoxin reduc 99.3 2.3E-12 7.7E-17 134.3 7.5 40 100-142 6-45 (312)
32 1ges_A Glutathione reductase; 99.3 1E-11 3.5E-16 136.4 12.3 36 99-137 3-38 (450)
33 3nix_A Flavoprotein/dehydrogen 99.3 2.9E-11 9.8E-16 131.3 15.2 75 401-491 100-175 (421)
34 4dna_A Probable glutathione re 99.3 2.8E-11 9.7E-16 133.3 14.0 35 100-137 5-39 (463)
35 2r9z_A Glutathione amide reduc 99.3 3.9E-11 1.3E-15 132.2 15.0 36 99-137 3-38 (463)
36 3ab1_A Ferredoxin--NADP reduct 99.3 5E-11 1.7E-15 126.7 15.3 37 98-137 12-48 (360)
37 3cty_A Thioredoxin reductase; 99.2 2.9E-10 1E-14 118.5 20.7 39 96-137 12-50 (319)
38 1trb_A Thioredoxin reductase; 99.2 6.8E-11 2.3E-15 123.2 15.8 35 99-136 4-38 (320)
39 3dk9_A Grase, GR, glutathione 99.2 1.1E-10 3.8E-15 129.1 18.3 36 99-137 19-54 (478)
40 2yqu_A 2-oxoglutarate dehydrog 99.2 4.8E-11 1.6E-15 131.2 14.7 36 243-281 166-201 (455)
41 3lad_A Dihydrolipoamide dehydr 99.2 1.5E-11 5.1E-16 136.1 10.5 35 99-136 2-36 (476)
42 3itj_A Thioredoxin reductase 1 99.2 1.3E-10 4.5E-15 121.8 17.2 37 97-136 19-55 (338)
43 3ka7_A Oxidoreductase; structu 99.2 2.1E-10 7.1E-15 124.6 19.2 211 406-645 195-425 (425)
44 3ef6_A Toluene 1,2-dioxygenase 99.2 3E-10 1E-14 123.1 20.3 36 243-281 142-177 (410)
45 3oz2_A Digeranylgeranylglycero 99.2 1.8E-09 6.2E-14 115.4 26.0 201 403-644 98-312 (397)
46 2weu_A Tryptophan 5-halogenase 99.2 4.2E-11 1.4E-15 133.6 12.9 206 400-646 166-375 (511)
47 1zk7_A HGII, reductase, mercur 99.2 1.3E-10 4.5E-15 128.1 16.6 36 99-137 3-38 (467)
48 1fec_A Trypanothione reductase 99.2 4.8E-11 1.7E-15 132.4 13.1 36 243-281 186-224 (490)
49 2eq6_A Pyruvate dehydrogenase 99.2 5.9E-11 2E-15 130.8 13.5 35 100-137 6-40 (464)
50 1v59_A Dihydrolipoamide dehydr 99.2 7.4E-11 2.5E-15 130.6 14.0 36 243-281 182-217 (478)
51 2hqm_A GR, grase, glutathione 99.2 1.5E-10 5.3E-15 128.0 16.5 36 99-137 10-45 (479)
52 4dgk_A Phytoene dehydrogenase; 99.2 6.9E-10 2.4E-14 123.3 21.6 57 407-481 221-278 (501)
53 2qae_A Lipoamide, dihydrolipoy 99.2 1.3E-10 4.5E-15 128.2 15.5 34 100-136 2-35 (468)
54 4a5l_A Thioredoxin reductase; 99.2 1.9E-11 6.5E-16 127.0 8.3 35 100-137 4-38 (314)
55 3r9u_A Thioredoxin reductase; 99.2 4.2E-10 1.5E-14 116.6 18.4 36 243-281 146-181 (315)
56 3ic9_A Dihydrolipoamide dehydr 99.2 3.2E-11 1.1E-15 133.9 10.3 35 100-137 8-42 (492)
57 1onf_A GR, grase, glutathione 99.2 3.7E-10 1.3E-14 125.6 18.6 35 100-137 2-36 (500)
58 1xdi_A RV3303C-LPDA; reductase 99.2 9.3E-11 3.2E-15 130.4 13.7 38 100-137 2-39 (499)
59 2wpf_A Trypanothione reductase 99.2 1.3E-10 4.4E-15 129.1 14.7 34 97-133 4-38 (495)
60 1q1r_A Putidaredoxin reductase 99.2 1.2E-09 3.9E-14 119.2 22.1 36 243-281 148-183 (431)
61 3iwa_A FAD-dependent pyridine 99.2 2.4E-10 8.2E-15 126.2 15.9 61 411-490 206-268 (472)
62 3atr_A Conserved archaeal prot 99.2 2.7E-09 9.2E-14 117.1 24.1 203 402-644 95-317 (453)
63 1zmd_A Dihydrolipoyl dehydroge 99.2 3.3E-10 1.1E-14 125.1 17.0 36 98-136 4-39 (474)
64 2a8x_A Dihydrolipoyl dehydroge 99.2 2.6E-10 9E-15 125.6 15.9 35 100-137 3-37 (464)
65 3i6d_A Protoporphyrinogen oxid 99.2 1.4E-10 4.9E-15 127.5 13.3 208 408-645 236-466 (470)
66 3dgz_A Thioredoxin reductase 2 99.2 1E-09 3.5E-14 121.7 20.2 34 99-135 5-38 (488)
67 1lvl_A Dihydrolipoamide dehydr 99.2 9E-11 3.1E-15 129.1 11.4 36 99-137 4-39 (458)
68 1w4x_A Phenylacetone monooxyge 99.2 6.2E-10 2.1E-14 125.1 18.5 37 98-137 14-50 (542)
69 3oc4_A Oxidoreductase, pyridin 99.2 1.6E-09 5.5E-14 118.9 21.4 36 243-281 146-181 (452)
70 3qfa_A Thioredoxin reductase 1 99.1 6.2E-10 2.1E-14 124.3 18.2 36 98-136 30-65 (519)
71 1ebd_A E3BD, dihydrolipoamide 99.1 2.1E-10 7.3E-15 126.0 14.1 35 100-137 3-37 (455)
72 1qo8_A Flavocytochrome C3 fuma 99.1 2.2E-10 7.6E-15 129.4 14.4 192 243-482 120-313 (566)
73 3f8d_A Thioredoxin reductase ( 99.1 1.1E-09 3.8E-14 113.8 18.7 34 99-135 14-47 (323)
74 3i3l_A Alkylhalidase CMLS; fla 99.1 2.5E-10 8.4E-15 129.1 13.5 206 399-645 120-344 (591)
75 1fl2_A Alkyl hydroperoxide red 99.1 1.7E-09 5.8E-14 112.1 18.8 36 243-281 143-178 (310)
76 1dxl_A Dihydrolipoamide dehydr 99.1 4.2E-10 1.5E-14 124.1 15.0 34 100-136 6-39 (470)
77 2zbw_A Thioredoxin reductase; 99.1 1.3E-09 4.6E-14 114.2 17.9 36 99-137 4-39 (335)
78 2q0l_A TRXR, thioredoxin reduc 99.1 1.6E-09 5.6E-14 112.2 18.2 36 243-281 142-177 (311)
79 1y0p_A Fumarate reductase flav 99.1 5.1E-10 1.8E-14 126.6 15.4 187 243-482 125-318 (571)
80 3dgh_A TRXR-1, thioredoxin red 99.1 1.8E-09 6.3E-14 119.5 19.4 33 99-134 8-40 (483)
81 3lov_A Protoporphyrinogen oxid 99.1 2.8E-10 9.6E-15 125.6 12.7 207 408-647 237-465 (475)
82 3nrn_A Uncharacterized protein 99.1 3.7E-09 1.3E-13 114.7 21.3 55 406-481 188-243 (421)
83 2bc0_A NADH oxidase; flavoprot 99.1 4.3E-09 1.5E-13 116.7 22.1 36 243-281 193-228 (490)
84 1nhp_A NADH peroxidase; oxidor 99.1 4.5E-09 1.5E-13 115.1 21.6 36 243-281 148-183 (447)
85 3ntd_A FAD-dependent pyridine 99.1 7.2E-09 2.4E-13 117.0 23.7 35 244-281 151-185 (565)
86 2bs2_A Quinol-fumarate reducta 99.1 1.1E-09 3.6E-14 125.3 16.9 195 243-484 4-223 (660)
87 1ojt_A Surface protein; redox- 99.1 2.8E-10 9.5E-15 126.0 11.7 37 97-136 3-39 (482)
88 4at0_A 3-ketosteroid-delta4-5a 99.1 5.8E-10 2E-14 124.3 14.3 61 408-482 203-265 (510)
89 3ics_A Coenzyme A-disulfide re 99.1 4.9E-09 1.7E-13 119.0 21.2 37 100-137 36-72 (588)
90 2q7v_A Thioredoxin reductase; 99.1 5.4E-09 1.9E-13 109.1 19.9 36 98-136 6-41 (325)
91 2gqw_A Ferredoxin reductase; f 99.1 5.6E-10 1.9E-14 120.9 12.7 36 243-281 144-179 (408)
92 3cgb_A Pyridine nucleotide-dis 99.1 7E-09 2.4E-13 114.7 21.4 36 243-281 185-220 (480)
93 2cdu_A NADPH oxidase; flavoenz 99.1 1.4E-08 4.7E-13 111.4 23.6 36 243-281 148-183 (452)
94 3e1t_A Halogenase; flavoprotei 99.1 2.1E-09 7.3E-14 119.8 17.3 74 401-489 105-179 (512)
95 3s5w_A L-ornithine 5-monooxyge 99.1 2.1E-09 7E-14 118.3 16.9 36 99-137 29-69 (463)
96 2wdq_A Succinate dehydrogenase 99.1 2.1E-09 7.1E-14 121.7 17.1 195 243-484 6-209 (588)
97 2aqj_A Tryptophan halogenase, 99.0 9.2E-10 3.1E-14 123.6 13.6 75 398-489 156-230 (538)
98 2h88_A Succinate dehydrogenase 99.0 1.8E-09 6E-14 122.6 15.8 190 243-484 17-220 (621)
99 1hyu_A AHPF, alkyl hydroperoxi 99.0 1.7E-09 5.8E-14 120.8 15.2 36 243-281 354-389 (521)
100 3lzw_A Ferredoxin--NADP reduct 99.0 3E-09 1E-13 111.0 16.0 35 100-137 7-41 (332)
101 3l8k_A Dihydrolipoyl dehydroge 99.0 2E-09 6.7E-14 118.7 15.2 36 243-281 171-206 (466)
102 3k30_A Histamine dehydrogenase 99.0 2.9E-09 9.8E-14 123.1 17.0 37 98-137 389-425 (690)
103 1xhc_A NADH oxidase /nitrite r 99.0 2E-09 7E-14 114.7 14.2 35 244-281 143-177 (367)
104 1vdc_A NTR, NADPH dependent th 99.0 6.6E-09 2.3E-13 108.7 17.8 36 243-281 158-193 (333)
105 1d4d_A Flavocytochrome C fumar 99.0 2.6E-09 8.8E-14 120.7 15.6 188 243-482 125-318 (572)
106 3v76_A Flavoprotein; structura 99.0 1.2E-09 4.2E-14 118.3 12.0 68 404-491 129-207 (417)
107 3nks_A Protoporphyrinogen oxid 99.0 1E-09 3.5E-14 121.1 11.2 207 407-647 234-474 (477)
108 3kd9_A Coenzyme A disulfide re 99.0 1.5E-08 5E-13 111.1 19.4 36 243-281 147-182 (449)
109 1chu_A Protein (L-aspartate ox 99.0 2.7E-09 9.3E-14 119.5 13.0 186 243-483 7-210 (540)
110 2i0z_A NAD(FAD)-utilizing dehy 98.9 6.7E-09 2.3E-13 113.7 15.4 69 405-491 132-211 (447)
111 3ihg_A RDME; flavoenzyme, anth 98.9 2.7E-08 9.1E-13 111.6 20.5 76 402-491 115-192 (535)
112 2qa2_A CABE, polyketide oxygen 98.9 7.2E-08 2.5E-12 107.0 23.3 71 403-491 103-175 (499)
113 3fmw_A Oxygenase; mithramycin, 98.9 1.2E-08 4.3E-13 114.8 16.4 72 401-491 142-216 (570)
114 2qa1_A PGAE, polyketide oxygen 98.9 6.9E-08 2.4E-12 107.2 21.9 71 403-491 102-174 (500)
115 2gmh_A Electron transfer flavo 98.9 3.6E-08 1.2E-12 111.5 19.8 75 402-491 139-230 (584)
116 4fk1_A Putative thioredoxin re 98.9 4.6E-10 1.6E-14 116.3 3.9 37 98-137 4-40 (304)
117 3d1c_A Flavin-containing putat 98.9 2.2E-08 7.6E-13 106.2 17.1 34 100-136 4-38 (369)
118 1m6i_A Programmed cell death p 98.9 2.3E-09 7.8E-14 119.0 9.5 40 97-137 8-47 (493)
119 2x8g_A Thioredoxin glutathione 98.9 1.9E-08 6.4E-13 114.4 17.0 34 99-135 106-139 (598)
120 4eqs_A Coenzyme A disulfide re 98.9 4.9E-08 1.7E-12 106.5 19.5 35 244-281 147-181 (437)
121 3rp8_A Flavoprotein monooxygen 98.9 6.1E-08 2.1E-12 104.6 19.7 61 402-483 122-183 (407)
122 3gyx_A Adenylylsulfate reducta 98.9 1E-08 3.5E-13 117.0 13.4 191 243-483 21-235 (662)
123 2gqf_A Hypothetical protein HI 98.9 7E-09 2.4E-13 111.8 11.2 71 405-491 107-188 (401)
124 2e4g_A Tryptophan halogenase; 98.9 3.7E-08 1.3E-12 110.8 17.5 74 400-490 187-261 (550)
125 2e5v_A L-aspartate oxidase; ar 98.8 2.2E-08 7.7E-13 110.3 15.0 173 246-483 1-178 (472)
126 1kf6_A Fumarate reductase flav 98.8 2.3E-08 7.9E-13 113.3 15.1 190 244-484 5-200 (602)
127 3nlc_A Uncharacterized protein 98.8 5.2E-08 1.8E-12 108.7 17.0 73 401-491 214-290 (549)
128 2ivd_A PPO, PPOX, protoporphyr 98.8 2.8E-08 9.6E-13 109.5 14.4 79 567-645 386-471 (478)
129 3qj4_A Renalase; FAD/NAD(P)-bi 98.8 1.6E-07 5.5E-12 98.7 19.7 78 567-645 259-340 (342)
130 3fpz_A Thiazole biosynthetic e 98.8 9.5E-09 3.2E-13 107.6 9.8 154 99-281 64-217 (326)
131 1rp0_A ARA6, thiazole biosynth 98.8 1.4E-07 4.9E-12 96.6 17.6 36 243-281 38-74 (284)
132 3fbs_A Oxidoreductase; structu 98.7 1.7E-08 5.8E-13 103.5 8.8 35 100-137 2-36 (297)
133 2pyx_A Tryptophan halogenase; 98.7 6.9E-08 2.4E-12 107.9 14.2 74 400-490 168-242 (526)
134 4a9w_A Monooxygenase; baeyer-v 98.7 2.5E-08 8.7E-13 104.9 10.1 35 100-137 3-37 (357)
135 4gde_A UDP-galactopyranose mut 98.7 4.5E-08 1.5E-12 108.8 12.5 59 407-488 222-281 (513)
136 1ps9_A 2,4-dienoyl-COA reducta 98.7 4.2E-08 1.4E-12 113.0 12.0 36 99-137 372-407 (671)
137 1jnr_A Adenylylsulfate reducta 98.7 2E-07 6.9E-12 106.5 15.4 69 405-484 149-221 (643)
138 2a87_A TRXR, TR, thioredoxin r 98.6 1.4E-08 4.7E-13 106.6 5.1 38 97-137 11-48 (335)
139 2r0c_A REBC; flavin adenine di 98.6 6E-07 2E-11 100.8 18.7 68 403-491 134-205 (549)
140 3ces_A MNMG, tRNA uridine 5-ca 98.6 2.2E-07 7.5E-12 104.6 13.8 62 402-481 119-181 (651)
141 2ywl_A Thioredoxin reductase r 98.6 6E-07 2.1E-11 85.0 15.0 65 405-490 54-118 (180)
142 2xve_A Flavin-containing monoo 98.6 7.4E-08 2.5E-12 105.9 9.6 36 243-281 196-231 (464)
143 2zxi_A TRNA uridine 5-carboxym 98.6 2.5E-07 8.7E-12 103.7 14.0 61 403-481 119-180 (637)
144 3klj_A NAD(FAD)-dependent dehy 98.6 1.9E-07 6.7E-12 99.9 12.6 35 244-281 146-180 (385)
145 3qvp_A Glucose oxidase; oxidor 98.6 1.4E-07 4.9E-12 106.0 11.7 66 416-491 236-304 (583)
146 2dkh_A 3-hydroxybenzoate hydro 98.6 2.5E-06 8.6E-11 97.5 21.8 77 403-491 137-220 (639)
147 2x3n_A Probable FAD-dependent 98.6 2.9E-07 1E-11 98.9 12.8 70 402-491 102-175 (399)
148 2gag_B Heterotetrameric sarcos 98.6 9.5E-08 3.2E-12 102.7 8.8 100 98-212 19-121 (405)
149 4a9w_A Monooxygenase; baeyer-v 98.6 4.3E-07 1.5E-11 95.3 13.5 59 405-483 74-134 (357)
150 4g6h_A Rotenone-insensitive NA 98.5 2.3E-07 7.9E-12 102.9 11.6 35 100-137 42-76 (502)
151 3h8l_A NADH oxidase; membrane 98.5 6.7E-07 2.3E-11 96.5 14.8 58 408-488 219-277 (409)
152 2vdc_G Glutamate synthase [NAD 98.5 4E-07 1.4E-11 99.7 13.0 36 99-137 121-156 (456)
153 1y56_B Sarcosine oxidase; dehy 98.5 9.1E-08 3.1E-12 102.1 7.5 97 99-212 4-101 (382)
154 2gv8_A Monooxygenase; FMO, FAD 98.5 1.9E-07 6.5E-12 102.1 9.9 36 243-281 211-247 (447)
155 3cp8_A TRNA uridine 5-carboxym 98.5 3.8E-07 1.3E-11 102.6 12.3 64 402-483 112-176 (641)
156 1ryi_A Glycine oxidase; flavop 98.5 9.8E-08 3.4E-12 101.8 6.2 101 96-211 13-121 (382)
157 3f8d_A Thioredoxin reductase ( 98.5 7.8E-07 2.7E-11 92.0 12.8 58 404-480 67-124 (323)
158 1o94_A Tmadh, trimethylamine d 98.5 3.6E-07 1.2E-11 106.0 11.0 36 99-137 388-423 (729)
159 3jsk_A Cypbp37 protein; octame 98.5 2.2E-06 7.7E-11 89.3 15.4 36 243-281 78-115 (344)
160 2bcg_G Secretory pathway GDP d 98.4 1.9E-06 6.5E-11 94.3 15.4 59 407-484 242-303 (453)
161 3nyc_A D-arginine dehydrogenas 98.4 2.1E-07 7.3E-12 98.9 7.3 92 99-205 8-100 (381)
162 3fbs_A Oxidoreductase; structu 98.4 1.4E-06 4.6E-11 89.1 13.0 57 406-481 55-112 (297)
163 2vvm_A Monoamine oxidase N; FA 98.4 4.9E-07 1.7E-11 100.1 10.3 56 407-481 255-312 (495)
164 2cul_A Glucose-inhibited divis 98.4 2.5E-06 8.5E-11 84.5 14.0 62 405-484 66-128 (232)
165 2oln_A NIKD protein; flavoprot 98.4 2.3E-07 7.9E-12 99.6 6.8 92 99-205 3-96 (397)
166 1yvv_A Amine oxidase, flavin-c 98.4 1.5E-06 5E-11 90.8 12.7 35 244-281 2-36 (336)
167 3p1w_A Rabgdi protein; GDI RAB 98.4 1.4E-06 4.8E-11 95.2 12.8 57 407-480 256-313 (475)
168 1k0i_A P-hydroxybenzoate hydro 98.4 1.8E-06 6.2E-11 92.4 13.5 69 404-489 100-170 (394)
169 3alj_A 2-methyl-3-hydroxypyrid 98.4 4E-06 1.4E-10 89.3 16.1 65 402-489 102-167 (379)
170 3axb_A Putative oxidoreductase 98.4 3.7E-07 1.3E-11 99.7 7.1 96 99-211 22-120 (448)
171 2gjc_A Thiazole biosynthetic e 98.4 5.4E-06 1.8E-10 85.9 15.3 36 243-281 64-101 (326)
172 3fim_B ARYL-alcohol oxidase; A 98.4 5.8E-07 2E-11 100.8 8.5 62 416-490 217-286 (566)
173 1w4x_A Phenylacetone monooxyge 98.3 2.2E-06 7.5E-11 96.1 13.0 36 243-281 15-50 (542)
174 3k7m_X 6-hydroxy-L-nicotine ox 98.3 7.2E-07 2.5E-11 96.8 8.6 34 245-281 2-35 (431)
175 3dme_A Conserved exported prot 98.3 4.5E-07 1.6E-11 95.7 6.6 97 99-210 3-102 (369)
176 2jbv_A Choline oxidase; alcoho 98.3 3.5E-06 1.2E-10 94.4 14.2 66 412-490 213-283 (546)
177 2zbw_A Thioredoxin reductase; 98.3 4.6E-06 1.6E-10 87.0 13.9 57 405-480 63-120 (335)
178 3itj_A Thioredoxin reductase 1 98.3 3.2E-06 1.1E-10 88.1 12.4 36 242-280 20-55 (338)
179 3kkj_A Amine oxidase, flavin-c 98.3 3.6E-07 1.2E-11 91.1 4.9 35 100-137 2-36 (336)
180 2gf3_A MSOX, monomeric sarcosi 98.3 7.6E-07 2.6E-11 95.0 7.6 90 100-204 3-95 (389)
181 1y56_A Hypothetical protein PH 98.3 1.8E-06 6.1E-11 95.6 10.7 57 415-490 265-323 (493)
182 2vou_A 2,6-dihydroxypyridine h 98.3 3.4E-06 1.2E-10 90.5 12.6 36 243-281 4-39 (397)
183 2q0l_A TRXR, thioredoxin reduc 98.3 3.6E-06 1.2E-10 86.8 12.1 59 404-481 56-114 (311)
184 2xdo_A TETX2 protein; tetracyc 98.3 1.2E-05 4E-10 86.4 15.7 59 403-482 124-183 (398)
185 3d1c_A Flavin-containing putat 98.3 2.3E-06 7.7E-11 90.6 10.0 59 404-482 85-144 (369)
186 1cjc_A Protein (adrenodoxin re 98.2 1E-06 3.4E-11 96.6 7.2 35 100-137 6-42 (460)
187 3ab1_A Ferredoxin--NADP reduct 98.2 8.2E-06 2.8E-10 86.1 14.1 59 405-481 72-131 (360)
188 1pn0_A Phenol 2-monooxygenase; 98.2 3.8E-05 1.3E-09 88.0 20.5 36 243-281 7-47 (665)
189 2gag_A Heterotetrameric sarcos 98.2 1.5E-06 5.1E-11 103.8 9.1 36 99-137 127-162 (965)
190 3dje_A Fructosyl amine: oxygen 98.2 1.9E-06 6.3E-11 93.8 9.0 37 98-137 4-41 (438)
191 1gte_A Dihydropyrimidine dehyd 98.2 2.6E-06 8.9E-11 102.4 10.9 34 100-136 187-221 (1025)
192 3q9t_A Choline dehydrogenase a 98.2 2.6E-06 8.9E-11 95.7 9.9 60 418-489 217-279 (577)
193 3c96_A Flavin-containing monoo 98.2 3.4E-06 1.2E-10 90.9 10.5 63 403-483 103-171 (410)
194 3ps9_A TRNA 5-methylaminomethy 98.2 2.5E-06 8.4E-11 98.3 9.9 102 100-219 272-380 (676)
195 4fk1_A Putative thioredoxin re 98.2 8E-06 2.7E-10 84.1 12.6 36 243-281 5-40 (304)
196 3cty_A Thioredoxin reductase; 98.2 5.6E-06 1.9E-10 85.8 11.5 36 243-281 15-50 (319)
197 2uzz_A N-methyl-L-tryptophan o 98.2 1.6E-06 5.6E-11 91.8 7.6 93 100-206 2-97 (372)
198 2bry_A NEDD9 interacting prote 98.2 3.2E-06 1.1E-10 93.7 10.1 36 243-281 91-126 (497)
199 3lzw_A Ferredoxin--NADP reduct 98.2 5.9E-06 2E-10 85.7 10.7 57 405-480 65-122 (332)
200 3pvc_A TRNA 5-methylaminomethy 98.2 4.1E-06 1.4E-10 96.6 10.1 105 100-219 264-375 (689)
201 1s3e_A Amine oxidase [flavin-c 98.2 9.9E-06 3.4E-10 90.2 12.9 36 243-281 3-38 (520)
202 2q7v_A Thioredoxin reductase; 98.1 1.2E-05 4.1E-10 83.5 12.4 58 406-481 64-123 (325)
203 1lqt_A FPRA; NADP+ derivative, 98.1 1.2E-05 4.1E-10 88.0 12.5 38 100-137 3-44 (456)
204 3oz2_A Digeranylgeranylglycero 98.1 1.3E-06 4.3E-11 93.1 4.4 35 100-137 4-38 (397)
205 1d5t_A Guanine nucleotide diss 98.1 1.8E-05 6E-10 86.1 13.5 59 407-484 234-293 (433)
206 2yg5_A Putrescine oxidase; oxi 98.1 1.7E-05 5.8E-10 86.5 13.3 36 243-281 4-39 (453)
207 4a5l_A Thioredoxin reductase; 98.1 1.4E-05 4.7E-10 82.4 11.7 35 244-281 4-38 (314)
208 3lad_A Dihydrolipoamide dehydr 98.1 3.3E-05 1.1E-09 84.9 15.3 36 243-281 2-37 (476)
209 4b63_A L-ornithine N5 monooxyg 98.1 1.3E-05 4.3E-10 88.9 11.6 38 243-281 245-282 (501)
210 2gv8_A Monooxygenase; FMO, FAD 98.1 3.9E-05 1.3E-09 83.7 14.9 36 243-281 5-42 (447)
211 4gcm_A TRXR, thioredoxin reduc 98.1 3.6E-05 1.2E-09 79.4 13.9 36 243-281 5-40 (312)
212 4gut_A Lysine-specific histone 98.0 6.1E-06 2.1E-10 95.8 8.5 36 243-281 335-370 (776)
213 2b9w_A Putative aminooxidase; 98.0 1.4E-05 4.7E-10 86.4 10.8 36 243-281 5-41 (424)
214 1c0p_A D-amino acid oxidase; a 98.0 3.6E-06 1.2E-10 89.1 6.0 37 98-137 4-40 (363)
215 3qfa_A Thioredoxin reductase 1 98.0 4.5E-05 1.5E-09 84.9 14.9 36 243-281 31-66 (519)
216 1vdc_A NTR, NADPH dependent th 98.0 2E-05 6.8E-10 82.0 11.1 57 405-481 68-124 (333)
217 3g3e_A D-amino-acid oxidase; F 98.0 3.3E-06 1.1E-10 88.9 5.2 47 101-162 1-53 (351)
218 2jae_A L-amino acid oxidase; o 98.0 1.6E-05 5.4E-10 87.7 10.6 36 243-281 10-45 (489)
219 3sx6_A Sulfide-quinone reducta 98.0 1.2E-05 4.1E-10 87.5 9.3 34 101-137 5-41 (437)
220 1ju2_A HydroxynitrIle lyase; f 98.0 2.1E-05 7.3E-10 87.8 11.5 67 413-490 200-271 (536)
221 1trb_A Thioredoxin reductase; 98.0 3E-05 1E-09 80.1 11.8 36 243-281 4-39 (320)
222 1pj5_A N,N-dimethylglycine oxi 98.0 5.9E-06 2E-10 97.4 7.2 97 98-209 2-100 (830)
223 4hb9_A Similarities with proba 98.0 4.1E-05 1.4E-09 81.9 13.3 34 245-281 2-35 (412)
224 1fl2_A Alkyl hydroperoxide red 98.0 3.2E-05 1.1E-09 79.5 11.9 59 407-481 56-115 (310)
225 1v59_A Dihydrolipoamide dehydr 98.0 4.1E-05 1.4E-09 84.2 13.2 35 244-281 5-39 (478)
226 3t37_A Probable dehydrogenase; 98.0 4.5E-05 1.5E-09 84.9 13.6 56 420-490 224-281 (526)
227 2a87_A TRXR, TR, thioredoxin r 98.0 4.3E-05 1.5E-09 79.7 12.5 36 243-281 13-48 (335)
228 1gpe_A Protein (glucose oxidas 97.9 9.7E-05 3.3E-09 83.3 15.7 65 417-491 241-308 (587)
229 4gde_A UDP-galactopyranose mut 97.9 8.4E-06 2.9E-10 90.3 6.5 38 98-137 8-45 (513)
230 3dgz_A Thioredoxin reductase 2 97.9 6.1E-05 2.1E-09 83.1 13.2 36 243-281 5-40 (488)
231 4dsg_A UDP-galactopyranose mut 97.9 2.7E-05 9.1E-10 85.9 10.0 36 243-281 8-44 (484)
232 3urh_A Dihydrolipoyl dehydroge 97.9 0.00019 6.4E-09 79.2 16.8 36 243-281 24-59 (491)
233 2qcu_A Aerobic glycerol-3-phos 97.9 7.9E-06 2.7E-10 90.6 5.6 48 100-162 3-50 (501)
234 1xdi_A RV3303C-LPDA; reductase 97.9 9.1E-05 3.1E-09 81.9 13.7 35 244-281 2-39 (499)
235 1n4w_A CHOD, cholesterol oxida 97.9 4.3E-05 1.5E-09 84.7 10.7 65 413-489 227-297 (504)
236 2rgh_A Alpha-glycerophosphate 97.8 1.1E-05 3.6E-10 90.9 5.8 48 100-162 32-79 (571)
237 1coy_A Cholesterol oxidase; ox 97.8 4.5E-05 1.5E-09 84.6 10.7 66 412-489 231-302 (507)
238 4ap3_A Steroid monooxygenase; 97.8 9.2E-05 3.1E-09 82.8 13.2 61 405-482 97-160 (549)
239 2qae_A Lipoamide, dihydrolipoy 97.8 0.00014 4.9E-09 79.6 14.4 35 244-281 2-36 (468)
240 1dxl_A Dihydrolipoamide dehydr 97.8 0.00019 6.6E-09 78.6 15.3 36 243-281 5-40 (470)
241 3gwf_A Cyclohexanone monooxyge 97.8 0.00012 4.2E-09 81.6 13.8 62 404-482 84-148 (540)
242 2r9z_A Glutathione amide reduc 97.8 0.00013 4.5E-09 79.8 13.6 36 243-281 3-38 (463)
243 3r9u_A Thioredoxin reductase; 97.8 9E-05 3.1E-09 76.1 11.6 36 243-281 3-39 (315)
244 1ebd_A E3BD, dihydrolipoamide 97.8 0.00016 5.6E-09 78.8 14.2 35 244-281 3-37 (455)
245 3dgh_A TRXR-1, thioredoxin red 97.8 0.00021 7E-09 78.7 15.0 35 243-280 8-42 (483)
246 4b1b_A TRXR, thioredoxin reduc 97.8 0.00028 9.7E-09 78.5 16.1 35 244-281 42-76 (542)
247 2xve_A Flavin-containing monoo 97.8 0.00021 7.1E-09 78.3 14.7 65 404-483 98-168 (464)
248 1zmd_A Dihydrolipoyl dehydroge 97.8 0.00027 9.2E-09 77.5 15.4 36 243-281 5-40 (474)
249 3da1_A Glycerol-3-phosphate de 97.8 1.6E-05 5.5E-10 89.3 5.6 35 100-137 18-52 (561)
250 2iid_A L-amino-acid oxidase; f 97.8 0.00011 3.8E-09 81.1 12.4 36 243-281 32-67 (498)
251 1yvv_A Amine oxidase, flavin-c 97.8 2E-05 6.8E-10 82.0 6.0 35 100-137 2-36 (336)
252 2bcg_G Secretory pathway GDP d 97.8 1.7E-05 5.9E-10 86.6 5.7 38 97-137 8-45 (453)
253 2a8x_A Dihydrolipoyl dehydroge 97.8 0.00022 7.5E-09 78.0 14.3 35 244-281 3-37 (464)
254 3rp8_A Flavoprotein monooxygen 97.8 1.6E-05 5.4E-10 85.5 5.1 36 98-136 21-56 (407)
255 3h8l_A NADH oxidase; membrane 97.8 3E-05 1E-09 83.4 7.1 37 245-281 2-38 (409)
256 4at0_A 3-ketosteroid-delta4-5a 97.8 2.2E-05 7.5E-10 87.2 6.3 37 98-137 39-75 (510)
257 1kdg_A CDH, cellobiose dehydro 97.7 0.00011 3.7E-09 82.3 11.9 36 243-281 6-41 (546)
258 3k7m_X 6-hydroxy-L-nicotine ox 97.7 1.6E-05 5.3E-10 86.1 4.8 34 101-137 2-35 (431)
259 3uox_A Otemo; baeyer-villiger 97.7 0.00012 4E-09 81.9 11.9 63 405-484 85-150 (545)
260 4dna_A Probable glutathione re 97.7 0.0002 7E-09 78.3 13.6 35 244-281 5-39 (463)
261 3o0h_A Glutathione reductase; 97.7 0.0002 6.7E-09 78.9 13.5 36 243-281 25-60 (484)
262 3i6d_A Protoporphyrinogen oxid 97.7 2.7E-05 9.1E-10 85.1 6.4 35 100-137 5-45 (470)
263 3c4n_A Uncharacterized protein 97.7 1.9E-05 6.5E-10 84.9 5.0 38 99-137 35-72 (405)
264 1ojt_A Surface protein; redox- 97.7 0.00013 4.5E-09 80.3 11.9 36 243-281 5-40 (482)
265 2hqm_A GR, grase, glutathione 97.7 0.00014 4.9E-09 79.9 12.1 36 243-281 10-45 (479)
266 3cgv_A Geranylgeranyl reductas 97.7 1.8E-05 6.2E-10 84.4 4.7 35 100-137 4-38 (397)
267 3l8k_A Dihydrolipoyl dehydroge 97.7 0.0001 3.5E-09 80.8 10.7 35 244-281 4-38 (466)
268 2gqf_A Hypothetical protein HI 97.7 2.1E-05 7.1E-10 84.5 4.7 36 99-137 3-38 (401)
269 3dk9_A Grase, GR, glutathione 97.7 0.00019 6.6E-09 78.8 12.6 36 243-281 19-54 (478)
270 1ges_A Glutathione reductase; 97.7 0.00049 1.7E-08 75.0 15.6 36 243-281 3-38 (450)
271 3v76_A Flavoprotein; structura 97.7 2.3E-05 8E-10 84.6 4.9 37 98-137 25-61 (417)
272 3nix_A Flavoprotein/dehydrogen 97.7 2.4E-05 8.1E-10 84.3 4.5 35 100-137 5-39 (421)
273 3ka7_A Oxidoreductase; structu 97.7 2.9E-05 1E-09 83.7 5.2 34 101-137 1-34 (425)
274 2cul_A Glucose-inhibited divis 97.6 3.3E-05 1.1E-09 76.3 5.0 34 100-136 3-36 (232)
275 1hyu_A AHPF, alkyl hydroperoxi 97.6 0.00018 6E-09 80.1 11.5 60 406-481 266-326 (521)
276 1zk7_A HGII, reductase, mercur 97.6 0.00029 1E-08 77.1 13.0 36 243-281 3-38 (467)
277 2eq6_A Pyruvate dehydrogenase 97.6 0.00053 1.8E-08 75.0 14.6 35 244-281 6-40 (464)
278 1k0i_A P-hydroxybenzoate hydro 97.6 3.5E-05 1.2E-09 82.3 5.0 34 100-136 2-35 (394)
279 3kkj_A Amine oxidase, flavin-c 97.6 3.6E-05 1.2E-09 76.2 4.8 35 244-281 2-36 (336)
280 3lov_A Protoporphyrinogen oxid 97.6 6.2E-05 2.1E-09 82.6 7.0 35 100-137 4-40 (475)
281 3c96_A Flavin-containing monoo 97.6 3.5E-05 1.2E-09 82.9 4.8 34 100-136 4-38 (410)
282 3p1w_A Rabgdi protein; GDI RAB 97.6 3.6E-05 1.2E-09 83.9 4.9 39 96-137 16-54 (475)
283 3nrn_A Uncharacterized protein 97.6 4.6E-05 1.6E-09 82.2 5.7 34 101-137 1-34 (421)
284 1onf_A GR, grase, glutathione 97.6 0.00026 9E-09 78.2 11.9 35 244-281 2-36 (500)
285 2qa1_A PGAE, polyketide oxygen 97.6 4.3E-05 1.5E-09 84.6 5.4 39 96-137 7-45 (500)
286 2b9w_A Putative aminooxidase; 97.6 8.3E-05 2.8E-09 80.2 7.4 36 99-137 5-41 (424)
287 2i0z_A NAD(FAD)-utilizing dehy 97.6 4.1E-05 1.4E-09 83.5 4.9 36 99-137 25-60 (447)
288 3sx6_A Sulfide-quinone reducta 97.6 3.1E-05 1.1E-09 84.2 3.9 38 244-281 4-41 (437)
289 1qo8_A Flavocytochrome C3 fuma 97.6 5.5E-05 1.9E-09 85.1 6.0 37 98-137 119-155 (566)
290 3i3l_A Alkylhalidase CMLS; fla 97.6 4.4E-05 1.5E-09 86.1 5.1 36 99-137 22-57 (591)
291 3atr_A Conserved archaeal prot 97.6 2.6E-05 9E-10 85.2 3.2 36 99-137 5-40 (453)
292 1sez_A Protoporphyrinogen oxid 97.6 6.5E-05 2.2E-09 83.0 6.4 38 97-137 10-47 (504)
293 2xdo_A TETX2 protein; tetracyc 97.6 5.1E-05 1.7E-09 81.3 5.2 35 99-136 25-59 (398)
294 4dgk_A Phytoene dehydrogenase; 97.5 3.6E-05 1.2E-09 85.0 4.1 34 101-137 2-35 (501)
295 1b37_A Protein (polyamine oxid 97.5 0.00025 8.4E-09 77.8 10.7 36 243-281 3-39 (472)
296 3nks_A Protoporphyrinogen oxid 97.5 4.9E-05 1.7E-09 83.3 4.9 34 101-137 3-38 (477)
297 3hyw_A Sulfide-quinone reducta 97.5 1.9E-05 6.3E-10 85.8 1.2 36 245-281 3-38 (430)
298 2x3n_A Probable FAD-dependent 97.5 5.3E-05 1.8E-09 81.1 4.8 34 100-136 6-39 (399)
299 1s3e_A Amine oxidase [flavin-c 97.5 6E-05 2E-09 83.8 5.3 36 99-137 3-38 (520)
300 3pl8_A Pyranose 2-oxidase; sub 97.5 0.00063 2.1E-08 77.2 13.8 61 420-492 273-336 (623)
301 3fmw_A Oxygenase; mithramycin, 97.5 5.4E-05 1.8E-09 85.1 4.9 36 99-137 48-83 (570)
302 2yqu_A 2-oxoglutarate dehydrog 97.5 0.00072 2.5E-08 73.7 13.8 34 245-281 2-35 (455)
303 1fec_A Trypanothione reductase 97.5 0.00069 2.4E-08 74.6 13.7 33 243-278 2-35 (490)
304 1y0p_A Fumarate reductase flav 97.5 7.5E-05 2.6E-09 84.1 6.0 36 99-137 125-160 (571)
305 2vou_A 2,6-dihydroxypyridine h 97.5 6.7E-05 2.3E-09 80.3 5.2 34 100-136 5-38 (397)
306 3e1t_A Halogenase; flavoprotei 97.5 5.3E-05 1.8E-09 84.1 4.6 36 99-137 6-41 (512)
307 2ivd_A PPO, PPOX, protoporphyr 97.5 7.8E-05 2.7E-09 81.8 5.7 36 99-137 15-50 (478)
308 3qj4_A Renalase; FAD/NAD(P)-bi 97.5 5.5E-05 1.9E-09 79.1 4.2 33 101-136 2-37 (342)
309 3alj_A 2-methyl-3-hydroxypyrid 97.5 6.7E-05 2.3E-09 79.7 4.9 35 100-137 11-45 (379)
310 2wdq_A Succinate dehydrogenase 97.5 6.5E-05 2.2E-09 84.8 4.9 36 99-137 6-41 (588)
311 2qa2_A CABE, polyketide oxygen 97.5 6.8E-05 2.3E-09 82.9 4.9 38 97-137 9-46 (499)
312 1rp0_A ARA6, thiazole biosynth 97.5 7E-05 2.4E-09 76.4 4.7 35 100-136 39-73 (284)
313 1rsg_A FMS1 protein; FAD bindi 97.5 7E-05 2.4E-09 83.2 5.0 36 99-137 7-43 (516)
314 2wpf_A Trypanothione reductase 97.5 0.00041 1.4E-08 76.5 11.2 33 243-278 6-39 (495)
315 2jae_A L-amino acid oxidase; o 97.5 8.9E-05 3E-09 81.6 5.7 38 97-137 8-45 (489)
316 3hdq_A UDP-galactopyranose mut 97.5 8.3E-05 2.8E-09 79.4 5.2 37 98-137 27-63 (397)
317 3ihg_A RDME; flavoenzyme, anth 97.4 7.2E-05 2.5E-09 83.5 4.8 36 99-137 4-39 (535)
318 2e1m_A L-glutamate oxidase; L- 97.4 8.7E-05 3E-09 78.6 5.1 37 98-137 42-79 (376)
319 3s5w_A L-ornithine 5-monooxyge 97.4 0.00048 1.7E-08 75.1 11.3 36 243-281 29-69 (463)
320 3jsk_A Cypbp37 protein; octame 97.4 9.4E-05 3.2E-09 77.0 5.2 37 99-136 78-114 (344)
321 2yg5_A Putrescine oxidase; oxi 97.4 9.1E-05 3.1E-09 80.6 5.3 36 99-137 4-39 (453)
322 3ihm_A Styrene monooxygenase A 97.4 7.1E-05 2.4E-09 81.2 4.4 35 99-136 21-55 (430)
323 2h88_A Succinate dehydrogenase 97.4 7.8E-05 2.7E-09 84.4 4.8 36 99-137 17-52 (621)
324 3vrd_B FCCB subunit, flavocyto 97.4 0.0012 4.2E-08 70.4 14.0 57 415-490 210-267 (401)
325 2bs2_A Quinol-fumarate reducta 97.4 7.4E-05 2.5E-09 85.2 4.6 36 99-137 4-39 (660)
326 2aqj_A Tryptophan halogenase, 97.4 9.4E-05 3.2E-09 82.6 5.3 35 100-137 5-42 (538)
327 2ywl_A Thioredoxin reductase r 97.4 0.0001 3.5E-09 69.3 4.8 33 101-136 2-34 (180)
328 2weu_A Tryptophan 5-halogenase 97.4 6.7E-05 2.3E-09 83.2 4.0 34 101-137 3-39 (511)
329 3ces_A MNMG, tRNA uridine 5-ca 97.4 9.4E-05 3.2E-09 83.3 5.0 35 99-136 27-61 (651)
330 2x8g_A Thioredoxin glutathione 97.4 0.0011 3.7E-08 75.0 13.9 34 243-279 106-139 (598)
331 3ic9_A Dihydrolipoamide dehydr 97.4 0.0012 3.9E-08 72.9 13.6 35 244-281 8-42 (492)
332 1v0j_A UDP-galactopyranose mut 97.4 0.00012 4.3E-09 78.4 5.4 38 98-137 5-42 (399)
333 3nlc_A Uncharacterized protein 97.4 0.00011 3.6E-09 81.9 4.9 36 99-137 106-141 (549)
334 1nhp_A NADH peroxidase; oxidor 97.4 0.00018 6.2E-09 78.3 6.6 36 245-281 1-36 (447)
335 1d5t_A Guanine nucleotide diss 97.4 0.00015 5.1E-09 78.7 5.9 38 97-137 3-40 (433)
336 2r0c_A REBC; flavin adenine di 97.3 0.00012 4E-09 82.1 4.9 36 99-137 25-60 (549)
337 2dkh_A 3-hydroxybenzoate hydro 97.3 0.00013 4.5E-09 83.2 5.4 37 98-137 30-67 (639)
338 2zxi_A TRNA uridine 5-carboxym 97.3 0.00013 4.4E-09 81.9 5.0 35 99-136 26-60 (637)
339 4hb9_A Similarities with proba 97.3 0.00013 4.3E-09 78.0 4.8 33 101-136 2-34 (412)
340 2e4g_A Tryptophan halogenase; 97.3 0.00014 4.9E-09 81.4 5.4 34 100-136 25-61 (550)
341 3cp8_A TRNA uridine 5-carboxym 97.3 0.00013 4.3E-09 82.2 4.8 35 99-136 20-54 (641)
342 3h28_A Sulfide-quinone reducta 97.3 4.4E-05 1.5E-09 82.7 1.0 36 245-281 3-38 (430)
343 3iwa_A FAD-dependent pyridine 97.3 0.00048 1.6E-08 75.5 9.3 37 244-281 3-39 (472)
344 1i8t_A UDP-galactopyranose mut 97.3 0.00013 4.5E-09 77.3 4.6 34 101-137 2-35 (367)
345 2bry_A NEDD9 interacting prote 97.3 0.00017 5.7E-09 79.8 5.5 35 99-136 91-125 (497)
346 2vvm_A Monoamine oxidase N; FA 97.3 0.00017 5.6E-09 79.6 5.5 35 100-137 39-73 (495)
347 1lvl_A Dihydrolipoamide dehydr 97.3 0.001 3.5E-08 72.5 11.6 36 243-281 4-39 (458)
348 3klj_A NAD(FAD)-dependent dehy 97.3 0.00018 6.1E-09 76.8 5.0 36 243-281 8-43 (385)
349 1q1r_A Putidaredoxin reductase 97.2 0.00085 2.9E-08 72.6 10.3 35 244-281 4-40 (431)
350 1jnr_A Adenylylsulfate reducta 97.2 0.00012 4.2E-09 83.4 3.8 36 99-137 21-60 (643)
351 3pl8_A Pyranose 2-oxidase; sub 97.2 0.00017 5.9E-09 81.8 4.9 36 99-137 45-80 (623)
352 4dsg_A UDP-galactopyranose mut 97.2 0.00028 9.7E-09 77.6 6.4 36 99-137 8-44 (484)
353 1kf6_A Fumarate reductase flav 97.2 0.00019 6.3E-09 81.2 5.0 35 100-137 5-41 (602)
354 2gjc_A Thiazole biosynthetic e 97.2 0.00023 8E-09 73.6 5.2 38 99-137 64-101 (326)
355 2e5v_A L-aspartate oxidase; ar 97.2 0.00024 8.2E-09 77.9 5.5 31 102-135 1-31 (472)
356 2gmh_A Electron transfer flavo 97.2 0.00022 7.6E-09 80.4 5.3 39 99-137 34-75 (584)
357 2pyx_A Tryptophan halogenase; 97.2 0.00018 6E-09 80.2 4.3 34 100-136 7-52 (526)
358 3fg2_P Putative rubredoxin red 97.2 0.00032 1.1E-08 75.2 6.1 34 245-281 2-37 (404)
359 1pn0_A Phenol 2-monooxygenase; 97.2 0.0002 6.8E-09 82.0 4.7 36 99-137 7-47 (665)
360 2cdu_A NADPH oxidase; flavoenz 97.2 0.00041 1.4E-08 75.6 7.0 36 245-281 1-36 (452)
361 3oc4_A Oxidoreductase, pyridin 97.2 0.00059 2E-08 74.3 8.2 36 245-281 3-38 (452)
362 1chu_A Protein (L-aspartate ox 97.2 0.00023 7.7E-09 79.5 4.7 35 99-137 7-41 (540)
363 3cgb_A Pyridine nucleotide-dis 97.2 0.00039 1.3E-08 76.4 6.5 37 244-281 36-72 (480)
364 3g5s_A Methylenetetrahydrofola 97.2 0.00028 9.4E-09 74.2 4.8 33 101-136 2-34 (443)
365 3t37_A Probable dehydrogenase; 97.1 0.0002 6.8E-09 79.6 4.1 37 99-137 16-52 (526)
366 3gyx_A Adenylylsulfate reducta 97.1 0.0003 1E-08 80.2 5.4 39 99-137 21-62 (662)
367 2iid_A L-amino-acid oxidase; f 97.1 0.00031 1.1E-08 77.4 5.4 36 99-137 32-67 (498)
368 3lxd_A FAD-dependent pyridine 97.1 0.00045 1.5E-08 74.4 6.4 36 243-281 8-45 (415)
369 1kdg_A CDH, cellobiose dehydro 97.1 0.00028 9.7E-09 78.9 4.8 35 99-136 6-40 (546)
370 2bi7_A UDP-galactopyranose mut 97.1 0.00032 1.1E-08 74.7 4.9 35 100-137 3-37 (384)
371 3c4a_A Probable tryptophan hyd 97.1 0.00038 1.3E-08 73.9 5.1 34 102-136 2-35 (381)
372 3qvp_A Glucose oxidase; oxidor 97.0 0.00033 1.1E-08 78.6 4.3 37 98-136 17-53 (583)
373 3ics_A Coenzyme A-disulfide re 97.0 0.0032 1.1E-07 70.9 12.5 38 243-281 35-72 (588)
374 4g6h_A Rotenone-insensitive NA 97.0 0.00075 2.6E-08 74.5 7.1 36 243-281 41-76 (502)
375 2bc0_A NADH oxidase; flavoprot 97.0 0.00034 1.2E-08 77.1 4.0 36 243-281 34-72 (490)
376 3q9t_A Choline dehydrogenase a 97.0 0.00037 1.3E-08 78.2 4.3 36 99-137 5-41 (577)
377 3fpz_A Thiazole biosynthetic e 97.0 0.00059 2E-08 70.8 5.3 38 243-281 64-101 (326)
378 1d4d_A Flavocytochrome C fumar 96.9 0.00062 2.1E-08 76.5 5.4 36 99-137 125-160 (572)
379 3h28_A Sulfide-quinone reducta 96.9 0.00059 2E-08 73.8 4.9 36 101-137 3-38 (430)
380 4gut_A Lysine-specific histone 96.8 0.00068 2.3E-08 78.7 4.9 35 100-137 336-370 (776)
381 1b37_A Protein (polyamine oxid 96.8 0.00073 2.5E-08 74.0 4.6 36 99-137 3-39 (472)
382 1coy_A Cholesterol oxidase; ox 96.7 0.0012 4.1E-08 73.0 5.6 37 97-136 8-44 (507)
383 3fim_B ARYL-alcohol oxidase; A 96.7 0.00058 2E-08 76.4 3.0 36 100-137 2-37 (566)
384 1ju2_A HydroxynitrIle lyase; f 96.7 0.00073 2.5E-08 75.3 3.7 36 98-137 24-59 (536)
385 2e1m_A L-glutamate oxidase; L- 96.7 0.002 6.7E-08 68.2 6.7 36 243-281 43-79 (376)
386 1sez_A Protoporphyrinogen oxid 96.7 0.0016 5.4E-08 71.8 6.1 36 243-281 12-47 (504)
387 1n4w_A CHOD, cholesterol oxida 96.6 0.0012 4.1E-08 72.9 4.9 35 99-136 4-38 (504)
388 3hdq_A UDP-galactopyranose mut 96.6 0.0017 5.8E-08 69.2 5.4 36 243-281 28-63 (397)
389 2z3y_A Lysine-specific histone 96.5 0.0018 6.1E-08 74.1 5.5 37 98-137 105-141 (662)
390 1rsg_A FMS1 protein; FAD bindi 96.5 0.0019 6.4E-08 71.6 5.1 36 243-281 7-43 (516)
391 3ihm_A Styrene monooxygenase A 96.4 0.0018 6.1E-08 70.0 4.5 36 243-281 21-56 (430)
392 2xag_A Lysine-specific histone 96.4 0.0023 7.9E-08 74.8 5.7 36 99-137 277-312 (852)
393 1gpe_A Protein (glucose oxidas 96.4 0.0019 6.6E-08 72.6 4.8 36 99-137 23-59 (587)
394 1v0j_A UDP-galactopyranose mut 96.4 0.0019 6.6E-08 69.0 4.6 36 243-281 6-42 (399)
395 3vrd_B FCCB subunit, flavocyto 96.4 0.0023 7.7E-08 68.3 5.1 35 102-137 4-38 (401)
396 1i8t_A UDP-galactopyranose mut 96.3 0.0027 9.2E-08 67.1 5.0 34 245-281 2-35 (367)
397 2jbv_A Choline oxidase; alcoho 96.3 0.0023 7.8E-08 71.4 4.2 37 99-137 12-48 (546)
398 3ayj_A Pro-enzyme of L-phenyla 96.2 0.0024 8.2E-08 72.8 4.3 34 100-136 56-97 (721)
399 3c4a_A Probable tryptophan hyd 96.2 0.0028 9.6E-08 67.1 4.1 34 245-281 1-36 (381)
400 1vg0_A RAB proteins geranylger 96.1 0.0047 1.6E-07 69.5 5.8 39 96-137 4-42 (650)
401 3hyw_A Sulfide-quinone reducta 96.1 0.004 1.4E-07 67.2 5.0 61 410-489 203-264 (430)
402 2bi7_A UDP-galactopyranose mut 96.1 0.0056 1.9E-07 65.0 5.9 35 244-281 3-37 (384)
403 3g5s_A Methylenetetrahydrofola 96.0 0.0049 1.7E-07 64.8 4.6 34 245-281 2-35 (443)
404 1mo9_A ORF3; nucleotide bindin 95.9 0.0066 2.3E-07 67.3 5.9 37 242-281 41-77 (523)
405 2vdc_G Glutamate synthase [NAD 95.9 0.0058 2E-07 66.5 5.2 36 243-281 121-156 (456)
406 3k30_A Histamine dehydrogenase 95.6 0.0087 3E-07 68.7 5.5 37 242-281 389-425 (690)
407 2z3y_A Lysine-specific histone 95.1 0.019 6.4E-07 65.6 6.0 37 242-281 105-141 (662)
408 1o94_A Tmadh, trimethylamine d 95.1 0.021 7.1E-07 66.0 6.2 36 243-281 388-423 (729)
409 2xag_A Lysine-specific histone 95.0 0.022 7.4E-07 66.6 6.0 37 242-281 276-312 (852)
410 3kd9_A Coenzyme A disulfide re 94.8 0.017 5.8E-07 62.6 4.3 37 244-281 3-39 (449)
411 1ps9_A 2,4-dienoyl-COA reducta 94.8 0.026 8.7E-07 64.6 5.8 36 243-281 372-407 (671)
412 4b63_A L-ornithine N5 monooxyg 94.8 0.46 1.6E-05 52.0 15.7 39 243-281 38-87 (501)
413 1xhc_A NADH oxidase /nitrite r 94.7 0.022 7.6E-07 59.9 4.7 35 243-281 7-41 (367)
414 3ef6_A Toluene 1,2-dioxygenase 94.5 0.028 9.5E-07 60.1 4.9 65 407-490 185-251 (410)
415 3ayj_A Pro-enzyme of L-phenyla 94.3 0.023 7.8E-07 64.8 3.9 36 243-281 55-99 (721)
416 1lqt_A FPRA; NADP+ derivative, 94.3 0.026 9E-07 61.3 4.3 35 244-281 3-44 (456)
417 2v3a_A Rubredoxin reductase; a 94.2 0.037 1.3E-06 58.5 5.2 35 244-281 4-40 (384)
418 1y56_A Hypothetical protein PH 94.2 0.021 7.3E-07 62.6 3.3 35 243-281 107-141 (493)
419 3ntd_A FAD-dependent pyridine 94.1 0.029 1E-06 62.6 4.2 83 407-491 192-278 (565)
420 1cjc_A Protein (adrenodoxin re 94.1 0.031 1.1E-06 60.7 4.3 36 243-281 5-42 (460)
421 2gqw_A Ferredoxin reductase; f 94.1 0.032 1.1E-06 59.6 4.3 61 407-490 187-249 (408)
422 1m6i_A Programmed cell death p 94.0 0.034 1.1E-06 61.1 4.4 66 406-490 225-292 (493)
423 1gte_A Dihydropyrimidine dehyd 93.8 0.039 1.3E-06 66.2 4.8 36 243-281 186-222 (1025)
424 2gag_A Heterotetrameric sarcos 93.4 0.049 1.7E-06 64.9 4.6 36 243-281 127-162 (965)
425 2g1u_A Hypothetical protein TM 93.0 0.094 3.2E-06 47.5 5.0 33 101-136 20-52 (155)
426 3fwz_A Inner membrane protein 92.9 0.12 4.1E-06 46.0 5.5 33 101-136 8-40 (140)
427 1vg0_A RAB proteins geranylger 92.8 0.091 3.1E-06 59.1 5.4 36 243-281 7-42 (650)
428 3llv_A Exopolyphosphatase-rela 92.6 0.1 3.5E-06 46.3 4.6 32 102-136 8-39 (141)
429 1lss_A TRK system potassium up 92.4 0.13 4.4E-06 45.2 4.9 33 101-136 5-37 (140)
430 3fwz_A Inner membrane protein 92.3 0.15 5.1E-06 45.3 5.2 36 243-281 6-41 (140)
431 4eqs_A Coenzyme A disulfide re 92.0 0.073 2.5E-06 57.4 3.3 59 408-489 189-249 (437)
432 3ic5_A Putative saccharopine d 91.8 0.16 5.3E-06 43.1 4.6 33 101-136 6-39 (118)
433 2g1u_A Hypothetical protein TM 91.7 0.18 6.1E-06 45.7 5.1 36 243-281 18-53 (155)
434 1lss_A TRK system potassium up 91.5 0.15 5.2E-06 44.7 4.3 35 244-281 4-38 (140)
435 3llv_A Exopolyphosphatase-rela 91.1 0.18 6.1E-06 44.7 4.3 35 244-281 6-40 (141)
436 3ic5_A Putative saccharopine d 90.8 0.2 6.9E-06 42.4 4.2 35 244-281 5-40 (118)
437 1id1_A Putative potassium chan 90.5 0.27 9.3E-06 44.3 5.1 32 101-135 4-35 (153)
438 3ado_A Lambda-crystallin; L-gu 90.4 0.2 6.7E-06 51.4 4.4 33 101-136 7-39 (319)
439 2hmt_A YUAA protein; RCK, KTN, 90.2 0.23 7.8E-06 43.7 4.2 32 102-136 8-39 (144)
440 1id1_A Putative potassium chan 90.1 0.31 1.1E-05 43.8 5.1 34 244-280 3-36 (153)
441 3c85_A Putative glutathione-re 89.3 0.41 1.4E-05 44.5 5.3 34 101-136 40-73 (183)
442 3c85_A Putative glutathione-re 88.9 0.31 1.1E-05 45.3 4.2 36 243-281 38-74 (183)
443 2hmt_A YUAA protein; RCK, KTN, 88.2 0.38 1.3E-05 42.2 4.2 35 244-281 6-40 (144)
444 3l4b_C TRKA K+ channel protien 88.1 0.33 1.1E-05 46.6 4.0 32 102-136 2-33 (218)
445 1pzg_A LDH, lactate dehydrogen 88.1 0.54 1.8E-05 48.5 5.7 33 101-136 10-43 (331)
446 1f0y_A HCDH, L-3-hydroxyacyl-C 88.0 0.42 1.4E-05 48.5 4.8 32 102-136 17-48 (302)
447 4e12_A Diketoreductase; oxidor 88.0 0.47 1.6E-05 47.7 5.1 32 102-136 6-37 (283)
448 3ado_A Lambda-crystallin; L-gu 87.5 0.37 1.3E-05 49.3 4.0 36 243-281 5-40 (319)
449 2ewd_A Lactate dehydrogenase,; 87.4 0.54 1.8E-05 48.1 5.2 33 101-136 5-38 (317)
450 3i83_A 2-dehydropantoate 2-red 87.2 0.51 1.7E-05 48.3 4.9 33 101-136 3-35 (320)
451 3dfz_A SIRC, precorrin-2 dehyd 87.0 0.52 1.8E-05 45.5 4.5 33 101-136 32-64 (223)
452 1kyq_A Met8P, siroheme biosynt 86.9 0.39 1.3E-05 48.0 3.7 33 101-136 14-46 (274)
453 4dio_A NAD(P) transhydrogenase 86.6 0.56 1.9E-05 49.5 4.9 33 101-136 191-223 (405)
454 2dpo_A L-gulonate 3-dehydrogen 86.6 0.5 1.7E-05 48.5 4.4 33 101-136 7-39 (319)
455 3dfz_A SIRC, precorrin-2 dehyd 86.6 0.59 2E-05 45.2 4.6 36 243-281 30-65 (223)
456 3p2y_A Alanine dehydrogenase/p 86.3 0.6 2.1E-05 48.8 4.9 33 101-136 185-217 (381)
457 3hn2_A 2-dehydropantoate 2-red 86.3 0.52 1.8E-05 48.1 4.4 33 101-136 3-35 (312)
458 1jw9_B Molybdopterin biosynthe 86.2 0.63 2.1E-05 45.8 4.8 33 101-136 32-65 (249)
459 1kyq_A Met8P, siroheme biosynt 86.1 0.47 1.6E-05 47.4 3.7 36 243-281 12-47 (274)
460 1lld_A L-lactate dehydrogenase 85.7 0.65 2.2E-05 47.4 4.8 33 101-136 8-42 (319)
461 2v6b_A L-LDH, L-lactate dehydr 85.3 0.71 2.4E-05 46.9 4.8 32 102-136 2-35 (304)
462 1t2d_A LDH-P, L-lactate dehydr 85.2 0.79 2.7E-05 47.0 5.1 33 101-136 5-38 (322)
463 2hjr_A Malate dehydrogenase; m 85.0 0.77 2.6E-05 47.2 4.9 33 101-136 15-48 (328)
464 3l4b_C TRKA K+ channel protien 85.0 0.59 2E-05 44.8 3.8 33 246-281 2-34 (218)
465 2raf_A Putative dinucleotide-b 84.9 0.85 2.9E-05 43.5 4.9 33 101-136 20-52 (209)
466 3k6j_A Protein F01G10.3, confi 84.8 0.73 2.5E-05 49.6 4.8 33 101-136 55-87 (460)
467 1ks9_A KPA reductase;, 2-dehyd 84.8 0.8 2.7E-05 45.7 4.9 32 102-136 2-33 (291)
468 1zej_A HBD-9, 3-hydroxyacyl-CO 84.8 0.71 2.4E-05 46.6 4.4 33 100-136 12-44 (293)
469 2y0c_A BCEC, UDP-glucose dehyd 84.7 0.73 2.5E-05 50.1 4.8 35 100-137 8-42 (478)
470 2a9f_A Putative malic enzyme ( 84.7 0.83 2.8E-05 47.8 4.9 34 100-136 188-222 (398)
471 3g17_A Similar to 2-dehydropan 84.5 0.67 2.3E-05 46.8 4.2 33 101-136 3-35 (294)
472 4e12_A Diketoreductase; oxidor 84.5 0.69 2.4E-05 46.4 4.2 34 245-281 5-38 (283)
473 3oj0_A Glutr, glutamyl-tRNA re 84.3 0.45 1.5E-05 42.3 2.4 33 101-136 22-54 (144)
474 3i83_A 2-dehydropantoate 2-red 84.0 0.86 2.9E-05 46.6 4.8 33 245-280 3-35 (320)
475 1x13_A NAD(P) transhydrogenase 83.7 0.9 3.1E-05 48.1 4.8 33 101-136 173-205 (401)
476 1bg6_A N-(1-D-carboxylethyl)-L 83.5 0.91 3.1E-05 46.9 4.8 33 101-136 5-37 (359)
477 1pjc_A Protein (L-alanine dehy 83.5 0.96 3.3E-05 47.2 5.0 33 101-136 168-200 (361)
478 2ew2_A 2-dehydropantoate 2-red 83.5 0.94 3.2E-05 45.8 4.8 32 102-136 5-36 (316)
479 1zcj_A Peroxisomal bifunctiona 83.4 0.85 2.9E-05 49.3 4.6 33 101-136 38-70 (463)
480 3ghy_A Ketopantoate reductase 83.3 0.92 3.2E-05 46.7 4.7 32 101-135 4-35 (335)
481 1f0y_A HCDH, L-3-hydroxyacyl-C 83.3 0.93 3.2E-05 45.8 4.6 34 245-281 16-49 (302)
482 1vl6_A Malate oxidoreductase; 83.1 1.1 3.7E-05 46.8 5.0 33 100-135 192-225 (388)
483 1pzg_A LDH, lactate dehydrogen 83.1 1.1 3.6E-05 46.2 5.0 37 242-281 7-44 (331)
484 2raf_A Putative dinucleotide-b 82.9 1.1 3.8E-05 42.7 4.7 35 243-280 18-52 (209)
485 3lk7_A UDP-N-acetylmuramoylala 82.8 0.95 3.3E-05 48.7 4.7 33 101-136 10-42 (451)
486 3oj0_A Glutr, glutamyl-tRNA re 82.7 0.71 2.4E-05 41.0 3.1 35 244-281 21-55 (144)
487 4g65_A TRK system potassium up 82.7 0.65 2.2E-05 50.2 3.3 34 101-137 4-37 (461)
488 2dpo_A L-gulonate 3-dehydrogen 82.5 0.86 2.9E-05 46.7 4.0 34 245-281 7-40 (319)
489 3e8x_A Putative NAD-dependent 82.5 1.2 4E-05 43.0 4.8 36 243-281 20-56 (236)
490 1l7d_A Nicotinamide nucleotide 82.5 1.1 3.7E-05 47.2 4.9 33 101-136 173-205 (384)
491 3tl2_A Malate dehydrogenase; c 82.5 1.1 3.7E-05 45.8 4.7 32 101-135 9-41 (315)
492 4a7p_A UDP-glucose dehydrogena 82.4 1.1 3.7E-05 48.2 4.9 35 100-137 8-42 (446)
493 1nyt_A Shikimate 5-dehydrogena 82.4 1.1 3.9E-05 44.5 4.8 33 101-136 120-152 (271)
494 3gg2_A Sugar dehydrogenase, UD 82.3 1.1 3.6E-05 48.4 4.8 34 101-137 3-36 (450)
495 1guz_A Malate dehydrogenase; o 82.2 1.1 3.9E-05 45.5 4.8 34 102-136 2-35 (310)
496 2eez_A Alanine dehydrogenase; 82.0 1.2 4E-05 46.6 5.0 33 101-136 167-199 (369)
497 3ego_A Probable 2-dehydropanto 82.0 1.1 3.9E-05 45.4 4.7 32 101-136 3-34 (307)
498 3hn2_A 2-dehydropantoate 2-red 81.9 0.86 2.9E-05 46.4 3.7 33 245-280 3-35 (312)
499 3ldh_A Lactate dehydrogenase; 81.7 2 6.9E-05 44.0 6.4 33 101-136 22-56 (330)
500 1a5z_A L-lactate dehydrogenase 81.7 1.2 4.2E-05 45.5 4.8 32 102-136 2-35 (319)
No 1
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=100.00 E-value=4e-40 Score=355.57 Aligned_cols=373 Identities=28% Similarity=0.420 Sum_probs=295.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcchhhHHHHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRENIEMSLFGAEFLR 322 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~~~~~~~~~~~~~~ 322 (673)
..+||+|||+|++|+++|++|+ +.|.+|+|+|+... +.+++..+.|.++..+.......+...+.++|+
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La---~~G~~V~lle~~~~--------~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 72 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELA---KRGEEVTVIEKRFI--------GSGSTFRCGTGIRQQFNDEANVRVMKRSVELWK 72 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHH---HTTCCEEEECSSST--------TCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHH---HCCCeEEEEeCCCC--------CCCccccccCeeeecCCChHHHHHHHHHHHHHH
Confidence 4589999999999999999999 78999999999866 566777788888877777666777788888888
Q ss_pred HHHhhccccCCCCCCcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEeccCCc
Q psy10285 323 NIKHHCHVIGEDEPDVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEKE 401 (673)
Q Consensus 323 ~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~~~~~~ 401 (673)
.+.+... . .+...|.+... ++...+.+....+.+++.|.+.++++++++.+.+|.+....+..+.+ .+.+
T Consensus 73 ~l~~~~~------~--~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~-~~~~ 143 (382)
T 1y56_B 73 KYSEEYG------F--SFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASW-NPTD 143 (382)
T ss_dssp HHHHHHT------C--CEECCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEE-ETTC
T ss_pred HHHHHhC------C--CeeccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEE-cCCC
Confidence 8876554 2 56778888887 66667777788888888999999999999999899876545555666 6889
Q ss_pred eeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 402 GWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
++++|..++..|.+.+++.|++++. ++|++|+.++ +++.+ |++.+| +++||.||+|+|.|
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--------------~~v~g--v~~~~g---~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN--------------NEIKG--VKTNKG---IIKTGIVVNATNAW 204 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--------------SBEEE--EEETTE---EEECSEEEECCGGG
T ss_pred eeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEEC--------------CEEEE--EEECCc---EEECCEEEECcchh
Confidence 9999999999999999999999996 5999999876 33444 777777 79999999999999
Q ss_pred cHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcC--CCceEEEecCCceEEec-CCCCCCCC
Q psy10285 481 SGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDT--TGTYFRREGLGNYYICG-KSPTPEQE 557 (673)
Q Consensus 481 s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~y~~~~~~~g~~i~G-~~~~~~~~ 557 (673)
+..|++.+++. ..+|+.+.+++++.++... +....+++++. ...|++|..+ + +++| .+......
T Consensus 205 s~~l~~~~g~~----------~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~y~~p~~~-g-~~iG~~~~~~~~~ 271 (382)
T 1y56_B 205 ANLINAMAGIK----------TKIPIEPYKHQAVITQPIK-RGTINPMVISFKYGHAYLTQTFH-G-GIIGGIGYEIGPT 271 (382)
T ss_dssp HHHHHHHHTCC----------SCCCCEEEEEEEEEECCCS-TTSSCSEEEESTTTTEEEECCSS-S-CCEEECSCCBSSC
T ss_pred HHHHHHHcCCC----------cCcCCCeeEeEEEEEccCC-cccCCCeEEecCCCeEEEEEeCC-e-EEEecCCCCCCCC
Confidence 99998877642 0168899999988876432 22223666654 4789999864 5 5444 32221111
Q ss_pred CCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCceeecCCCCCcEEEEEccCCccccchhHHHH
Q psy10285 558 PPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIHFATGFSGHGIQQAPAIGR 637 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~~~~G~~g~G~~~ap~~g~ 637 (673)
. +...+.+. .+.+++.+.++||.+.+.++...|+|+|+. |+|+.|+||++|..+|+|+++||+|+||+++|++|+
T Consensus 272 ~---~~~~~~~~-~~~l~~~~~~~~p~l~~~~~~~~~~g~r~~-t~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~ 346 (382)
T 1y56_B 272 Y---DLTPTYEF-LREVSYYFTKIIPALKNLLILRTWAGYYAK-TPDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGE 346 (382)
T ss_dssp C---CCCCCHHH-HHHHHHHHHHHCGGGGGSEEEEEEEEEEEE-CTTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHH
T ss_pred C---CCCCCHHH-HHHHHHHHHHhCCCcCCCCceEEEEecccc-CCCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHH
Confidence 1 12233344 488889999999999988999999999996 999999999999889999999999999999999999
Q ss_pred HHHHHHHcCCCCccCCccccccccccCccccccCCC
Q psy10285 638 AVSELILDAEFKTIDLSRFLLERVARRQEAREVNIV 673 (673)
Q Consensus 638 ~va~~i~~~~~~~~d~~~f~~~Rf~~~~~~~~~~~~ 673 (673)
.+|++|.++. +..+++.|+|+||..++++.|.+|+
T Consensus 347 ~la~~i~~~~-~~~~~~~~~~~Rf~~~~~~~~~~~~ 381 (382)
T 1y56_B 347 MVAELITKGK-TKLPVEWYDPYRFERGELRTAALQM 381 (382)
T ss_dssp HHHHHHHHSS-CSSCGGGGCGGGTTTTCCC------
T ss_pred HHHHHHhCCC-CcCcccccCHhhhccCCCCCccccC
Confidence 9999999887 4567899999999999999999875
No 2
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=100.00 E-value=5.3e-40 Score=353.86 Aligned_cols=364 Identities=20% Similarity=0.275 Sum_probs=288.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcchhhHHHHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRENIEMSLFGAEFLR 322 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~~~~~~~~~~~~~~ 322 (673)
..+||+|||+|++|+++|++|+ + |.+|+|+|+.+. .+.++++.+.|.++..+.......+...+.++|+
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La---~-G~~V~vlE~~~~-------~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 76 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS---A-HGRVVVLEREAQ-------PGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFD 76 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT---T-TSCEEEECSSSS-------TTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCcHHHHHHHHHHh---C-CCCEEEEECCCC-------ccccccccccceeecccCCHHHHHHHHHHHHHHH
Confidence 4689999999999999999998 5 899999999865 3567788888888887777767777777777777
Q ss_pred HHHhhccccCCCCCCcceeecCeEEEeccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEeccCCce
Q psy10285 323 NIKHHCHVIGEDEPDVNFTPNGYLFCASQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEKEG 402 (673)
Q Consensus 323 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~~~~~~g 402 (673)
++...+ .....+...|.+.+......+.+.+..+.++..+++.++++.+++.+.+|.+..+....+.+ .+.++
T Consensus 77 ~~~~~~------~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~-~~~~~ 149 (381)
T 3nyc_A 77 NPPAGF------CEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATY-DPTGA 149 (381)
T ss_dssp SCCTTS------CSSCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEE-ETTCE
T ss_pred Hhhhhh------CCcccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEE-cCCCc
Confidence 654322 12223777888888844556777788888888999999999999999999887665555666 68899
Q ss_pred eeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 403 WFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 403 ~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
+++|..++..|.+.+++.|++|+. ++|++|..+++ ++.|+|.+| +++||.||+|+|+|+
T Consensus 150 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-----------------~~~V~t~~g---~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 150 DIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDG-----------------AWEVRCDAG---SYRAAVLVNAAGAWC 209 (381)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETT-----------------EEEEECSSE---EEEESEEEECCGGGH
T ss_pred eECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC-----------------eEEEEeCCC---EEEcCEEEECCChhH
Confidence 999999999999999999999995 69999998764 466888887 899999999999999
Q ss_pred HHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCC-CCCCeEEcC-CCceEEEecCCceEEecCCCCCCCCCC
Q psy10285 482 GQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPG-VNTPMVIDT-TGTYFRREGLGNYYICGKSPTPEQEPP 559 (673)
Q Consensus 482 ~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~-~~~~~~~~~-~~~y~~~~~~~g~~i~G~~~~~~~~~~ 559 (673)
..|++.+++. .+|+.|.|++++.++.+.... ...|++.+. ...|++|.. +.+++|.+......+
T Consensus 210 ~~l~~~~g~~-----------~~~~~p~rg~~~~~~~~~~~~~~~~p~~~~~~~~~y~~p~~--g~~~ig~~~~~~~~~- 275 (381)
T 3nyc_A 210 DAIAGLAGVR-----------PLGLQPKRRSAFIFAPPPGIDCHDWPMLVSLDESFYLKPDA--GMLLGSPANADPVEA- 275 (381)
T ss_dssp HHHHHHHTCC-----------CCCCEEEEEEEEEECCCTTCCCTTCCEEEETTSSCEEEEET--TEEEEECCCCEECCS-
T ss_pred HHHHHHhCCC-----------CCceeeeEEEEEEECCCcCCCcCccceEEeCCCCEEEEeCC--CcEEEeCCcCCCCCc-
Confidence 9999988752 367999999998887654221 124565543 468999995 556556554432111
Q ss_pred CCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCceeecCCCCCcEEEEEccCCccccchhHHHHHH
Q psy10285 560 VDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIHFATGFSGHGIQQAPAIGRAV 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~~~~G~~g~G~~~ap~~g~~v 639 (673)
.+...+...+ +.+++.+.+ +|.+...++...|+|+|++ |+|+.|+||++|..+|+|+++||+|+||+++|++|+.+
T Consensus 276 -~~~~~~~~~~-~~~~~~~~~-~~~l~~~~~~~~w~G~r~~-t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~l 351 (381)
T 3nyc_A 276 -HDVQPEQLDI-ATGMYLIEE-ATTLTIRRPEHTWAGLRSF-VADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEAS 351 (381)
T ss_dssp -SCCCCCHHHH-HHHHHHHHH-HBSCCCCCCSEEEEEEEEE-CTTSCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHH
T ss_pred -ccCCCChHHH-HHHHHHHHh-cCCCcccceeeeeEEcccc-CCCCCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHH
Confidence 1122222333 566666654 5788888899999999996 99999999999989999999999999999999999999
Q ss_pred HHHHHcCCCCc------cCCccccccccc
Q psy10285 640 SELILDAEFKT------IDLSRFLLERVA 662 (673)
Q Consensus 640 a~~i~~~~~~~------~d~~~f~~~Rf~ 662 (673)
|++|.++..+. +|++.|+|+||.
T Consensus 352 a~~i~g~~~~~~~~~~~~d~~~~~~~Rf~ 380 (381)
T 3nyc_A 352 AALIRHQPLPAHLREHGLDEAMLSPRRLS 380 (381)
T ss_dssp HHHHTTCCCCHHHHTTTCCHHHHCGGGGC
T ss_pred HHHHhCCCCCcccccccCcccccCccccC
Confidence 99999888432 678999999995
No 3
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=100.00 E-value=8.2e-39 Score=345.88 Aligned_cols=375 Identities=22% Similarity=0.302 Sum_probs=286.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCc-chhhHHHHHHHHHHH
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSL-RENIEMSLFGAEFLR 322 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~-~~~~~~~~~~~~~~~ 322 (673)
.+||+|||+|++|+++|++|+ +.|.+|+|||+.... ...+++..+.+.++..+.. .....+...+.++|+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La---~~G~~V~vie~~~~~------~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLA---KQGVKTLLVDAFDPP------HTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWY 73 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHH---HTTCCEEEECSSCSS------CSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHH---hCCCeEEEEeCCCCC------CCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHH
Confidence 579999999999999999999 789999999998871 1125566666666655543 355667788888888
Q ss_pred HHHhhccccCCCCCCcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEeccCCc
Q psy10285 323 NIKHHCHVIGEDEPDVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEKE 401 (673)
Q Consensus 323 ~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~~~~~~ 401 (673)
++.+... .+ .+...|.+.+. .+ ....+++..+.++..|++.++++.+++.+.+|.+.......+++ .+..
T Consensus 74 ~l~~~~~------~~-~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~-~~~~ 144 (389)
T 2gf3_A 74 ELEKETH------HK-IFTKTGVLVFGPKG-ESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIF-EPNS 144 (389)
T ss_dssp HHHHHCS------SC-CEECCCEEEEEETT-CCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEE-ETTC
T ss_pred HHHHHhC------Cc-ceeecceEEEcCCC-chHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEE-eCCC
Confidence 8876543 33 36677888777 43 34456666677778899999999999999999876555555666 6788
Q ss_pred eeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 402 GWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
++++|..++..|.+.+++.|++++. ++|++|+.+++ ++.|.+.+| +++||.||+|+|.|
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-----------------~~~v~~~~g---~~~a~~vV~A~G~~ 204 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPD-----------------SVKIETANG---SYTADKLIVSMGAW 204 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-----------------CEEEEETTE---EEEEEEEEECCGGG
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCC-----------------eEEEEeCCC---EEEeCEEEEecCcc
Confidence 9999999999999999999999995 59999998764 466777766 79999999999999
Q ss_pred cHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCC---CCCCCeEEcC---CCceEEEecCCceEEecCCCCC
Q psy10285 481 SGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGP---GVNTPMVIDT---TGTYFRREGLGNYYICGKSPTP 554 (673)
Q Consensus 481 s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~---~~~~~~~~~~---~~~y~~~~~~~g~~i~G~~~~~ 554 (673)
+..+++.++ ..+|+.|.+++++.++.+... ....|++... ...|++|..++..+++|.+...
T Consensus 205 ~~~l~~~~g------------~~~pl~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y~~p~~~g~~~~iG~~~~~ 272 (389)
T 2gf3_A 205 NSKLLSKLN------------LDIPLQPYRQVVGFFESDESKYSNDIDFPGFMVEVPNGIYYGFPSFGGCGLKLGYHTFG 272 (389)
T ss_dssp HHHHGGGGT------------EECCCEEEEEEEEEECCCHHHHBGGGTCCEEEEEETTEEEEEECBSTTCCEEEEESSCC
T ss_pred HHHHhhhhc------------cCCceEEEEEEEEEEecCcccccccccCCEEEEeCCCCcEEEcCCCCCCcEEEEEcCCC
Confidence 999988765 356899999999988754210 0123544322 2578999864315655543321
Q ss_pred C-CCCCCCCCCC--ChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCceeecCCCCCcEEEEEccCCccccc
Q psy10285 555 E-QEPPVDNLDV--DYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIHFATGFSGHGIQQ 631 (673)
Q Consensus 555 ~-~~~~~~~~~~--~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~~~~G~~g~G~~~ 631 (673)
. ..+...+... +++.+ +.+++.+.++||.+.. .+...|+|+|+. |+|+.|+||++|..+|+|+++||+|+||++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~P~l~~-~~~~~w~g~r~~-t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ 349 (389)
T 2gf3_A 273 QKIDPDTINREFGVYPEDE-SNLRAFLEEYMPGANG-ELKRGAVCMYTK-TLDEHFIIDLHPEHSNVVIAAGFSGHGFKF 349 (389)
T ss_dssp EECCTTTCCCCTTSSHHHH-HHHHHHHHHHCGGGCS-CEEEEEEEEEEE-CTTSCCEEEEETTEEEEEEEECCTTCCGGG
T ss_pred CccCcccccCccCCCHHHH-HHHHHHHHHhCCCCCC-CceEEEEEEecc-CCCCCeEEccCCCCCCEEEEECCccccccc
Confidence 0 1111112223 44555 8899999999999887 788899999986 999999999999889999999999999999
Q ss_pred hhHHHHHHHHHHHcCCCCccCCccccccccccCccccccCC
Q psy10285 632 APAIGRAVSELILDAEFKTIDLSRFLLERVARRQEAREVNI 672 (673)
Q Consensus 632 ap~~g~~va~~i~~~~~~~~d~~~f~~~Rf~~~~~~~~~~~ 672 (673)
+|++|+.+|++|.++. ++.+++.|+|+||....-+.|.+|
T Consensus 350 ap~~g~~la~~i~~~~-~~~~~~~~~~~Rf~~~~~~~~~~~ 389 (389)
T 2gf3_A 350 SSGVGEVLSQLALTGK-TEHDISIFSINRPALKESLQKTTI 389 (389)
T ss_dssp HHHHHHHHHHHHHHSC-CSSCCGGGCTTCGGGTCEEC----
T ss_pred cHHHHHHHHHHHcCCC-CCCCccccccccccccccceeccC
Confidence 9999999999999887 567889999999999888888776
No 4
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=100.00 E-value=1.9e-37 Score=337.07 Aligned_cols=373 Identities=20% Similarity=0.274 Sum_probs=297.8
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhhcc-CC-CeEEEEecCCCCCCCcccccccccccccCceecccCcchhhHHHHHHHH
Q psy10285 242 PTHVDILIIGGGAIGSSIAYFIKEKVL-DG-CRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRENIEMSLFGAE 319 (673)
Q Consensus 242 ~~~~~v~iiG~G~~g~~~A~~l~~~~~-~g-~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~~~~~~~~~~~ 319 (673)
+..+||+|||+|++|+++|++|+ + .| .+|+|||+... +.+++..+.|.++..+.......+...+.+
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La---~~~G~~~V~vlE~~~~--------~~gas~~~~g~~~~~~~~~~~~~l~~~~~~ 87 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLA---KNHGITNVAVLEKGWL--------AGGNMARNTTIIRSNYLWDESAGIYEKSLK 87 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHH---HHHCCCCEEEECSSST--------TCSGGGTSCCCBCCCCSSHHHHHHHHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHH---HhcCCCcEEEEeCCCC--------CCCcccccCceeeecCCCHHHHHHHHHHHH
Confidence 46789999999999999999999 7 78 99999999887 556777788888877776666677777888
Q ss_pred HHHHHHhhccccCCCCCCcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCc-----cccee
Q psy10285 320 FLRNIKHHCHVIGEDEPDVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNT-----DDIAL 393 (673)
Q Consensus 320 ~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~-----~~~~~ 393 (673)
.|..+.+... .++.+...|.+.+. .+...+.+.+..+.++..|.+.++++.+++.+.+|.+.. .....
T Consensus 88 ~~~~~~~~~~------~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~ 161 (405)
T 2gag_B 88 LWEQLPEDLE------YDFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMG 161 (405)
T ss_dssp HHHHHHHHTT------CCCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCE
T ss_pred HHHHHHHHhC------CCcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCccccccccccee
Confidence 8888776544 66778888999888 666677777788888889999999999999998887765 34455
Q ss_pred EEeccCCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCE
Q psy10285 394 ACLGLEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAI 472 (673)
Q Consensus 394 g~~~~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~ 472 (673)
+.+ .+.+++++|..++..|.+.+++.|++++. ++|++|..++ +++.+ |++.+| +++||.
T Consensus 162 ~~~-~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--------------~~~~~--v~~~~g---~~~a~~ 221 (405)
T 2gag_B 162 ATW-QPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG--------------EKVTG--VKTTRG---TIHAGK 221 (405)
T ss_dssp EEE-ETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--------------SBEEE--EEETTC---CEEEEE
T ss_pred EEE-eCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC--------------CEEEE--EEeCCc---eEECCE
Confidence 665 68899999999999999999999999995 6999998875 33434 777777 799999
Q ss_pred EEEcCCCCcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcC-CCceEEEecCCceEEecCC
Q psy10285 473 CVIAAGAYSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDT-TGTYFRREGLGNYYICGKS 551 (673)
Q Consensus 473 VVlAtG~~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~~~~g~~i~G~~ 551 (673)
||+|+|+|+..+++.+++ .+|+.+.+++++.++... +. ..+++.+. ...|++|.. ++.+++|.+
T Consensus 222 vV~a~G~~s~~l~~~~g~------------~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~y~~p~~-~g~~~ig~~ 286 (405)
T 2gag_B 222 VALAGAGHSSVLAEMAGF------------ELPIQSHPLQALVSELFE-PV-HPTVVMSNHIHVYVSQAH-KGELVMGAG 286 (405)
T ss_dssp EEECCGGGHHHHHHHHTC------------CCCEEEEEEEEEEEEEBC-SC-CCSEEEETTTTEEEEECT-TSEEEEEEE
T ss_pred EEECCchhHHHHHHHcCC------------CCCccccceeEEEecCCc-cc-cCceEEeCCCcEEEEEcC-CCcEEEEec
Confidence 999999999999888774 457888899887765321 11 23455443 467899975 455655544
Q ss_pred CCCCCCCCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCceeecCCCCCcEEEEEccCCccccc
Q psy10285 552 PTPEQEPPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIHFATGFSGHGIQQ 631 (673)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~~~~G~~g~G~~~ 631 (673)
.......+ ...+.+. .+.+++.+.+++|.+.+.++...|+|+|++ ++|+.|+||.+| .+|+|+++|++|+|+++
T Consensus 287 ~~~~~~~~---~~~~~~~-~~~l~~~~~~~~p~l~~~~~~~~w~g~~~~-t~d~~p~ig~~~-~~~l~~~~G~~g~G~~~ 360 (405)
T 2gag_B 287 IDSYNGYG---QRGAFHV-IQEQMAAAVELFPIFARAHVLRTWGGIVDT-TMDASPIISKTP-IQNLYVNCGWGTGGFKG 360 (405)
T ss_dssp ECSSCCCS---SCCCTHH-HHHHHHHHHHHCGGGGGCEECEEEEEEEEE-ETTSCCEEEECS-SBTEEEEECCGGGCSTT
T ss_pred cCCCCccc---cCCCHHH-HHHHHHHHHHhCCccccCCcceEEeecccc-CCCCCCEecccC-CCCEEEEecCCCchhhH
Confidence 33211111 1122233 378889999999999888899999999986 999999999987 78999999999999999
Q ss_pred hhHHHHHHHHHHHcCCCCccCCccccccccccCccccccCCC
Q psy10285 632 APAIGRAVSELILDAEFKTIDLSRFLLERVARRQEAREVNIV 673 (673)
Q Consensus 632 ap~~g~~va~~i~~~~~~~~d~~~f~~~Rf~~~~~~~~~~~~ 673 (673)
||.+|+.+|++|.++. +..+++.|+|+||..+++.+|.+++
T Consensus 361 a~~~g~~la~~i~g~~-~~~~~~~~~~~R~~~~~~~~~~~~~ 401 (405)
T 2gag_B 361 TPGAGFTLAHTIANDE-PHELNKPFSLERFETGHLIDEHGAA 401 (405)
T ss_dssp HHHHHHHHHHHHHHTS-CCTTTTTSCSTHHHHTCCCCCTTTT
T ss_pred HHHHHHHHHHHHhCCC-CCccccccCcchhcCCccccCcccc
Confidence 9999999999999887 4457899999999999999998764
No 5
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=100.00 E-value=2.9e-37 Score=340.64 Aligned_cols=381 Identities=21% Similarity=0.279 Sum_probs=278.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCC-CeEEEEec-CCCCCCCcccccccccccccCceecccCcchhhHHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDG-CRVAVVDR-DFTVNYDLDEYARASTTLSVGGLRQQFSLRENIEMSLFGAEF 320 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g-~~v~~ie~-~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~~~~~~~~~~~~ 320 (673)
..+||+|||+|++|+++|++|+ +.| .+|+|||+ ... +.+++..+.|.+...+.......+...+.++
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La---~~G~~~V~vlE~~~~~--------~~g~S~~~~g~i~~~~~~~~~~~l~~~~~~~ 90 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLK---VWSGGSVLVVDAGHAP--------GSGDSGRSMAAFRTFFSSTMNRLVAGSTVRL 90 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHH---HHHCSCEEEEESSSST--------TCSGGGSSCCEEECCCSSHHHHHHHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHH---hCCCCcEEEEccCCCC--------CCCcccCCCcEecccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999 778 89999999 555 5677788888888777666667777788888
Q ss_pred HHHHHhhccccCCCCCCcceeecCeEEEeccchHHHHHHHHHHHHHcCCcc-----eee-----------CHhhHHhhCC
Q psy10285 321 LRNIKHHCHVIGEDEPDVNFTPNGYLFCASQDGAATLEKNHQLQKELGAKN-----VLL-----------GPEQLKAKFP 384 (673)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~g~~~-----~~l-----------~~~~~~~~~p 384 (673)
|+++... . .++.+...|.+...++.....++...+.+++.|.+. +++ +.+++.+.
T Consensus 91 ~~~l~~~-g------~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~p~~~~~l~~~g~~~~~~~~~~~~~~~-- 161 (448)
T 3axb_A 91 FEDAQRG-G------EDLGLVKSGYLFVYDRERWREVEEPLREAGEEGRDYLIIPPEELERRLGMNTRVSDGEEAEVL-- 161 (448)
T ss_dssp HHHHHHT-T------CCCCCBCCCEEEEECHHHHHHHHHHHTTSCCBTTTEEEECHHHHHHHHCCCCCCTTSSHHHHH--
T ss_pred HHHHHhc-C------cccccccCCEEEEcCHHHHHHHHHHHHHHHhhCCCccccchhhhhhcccccccCCCHHHHHhc--
Confidence 8877653 2 566677788887335555555555554444556655 555 66666551
Q ss_pred CCCcccceeEEeccCCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCC-CccceeeEEEEcCC
Q psy10285 385 WLNTDDIALACLGLEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDG-EYHSVNECVVRDEK 462 (673)
Q Consensus 385 ~~~~~~~~~g~~~~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~-~~~~v~gv~V~t~~ 462 (673)
.......+.+ .+.++++++..++..|.+.+++.|++++. ++|++|..+..+....++.... +.+++.+ |.+.+
T Consensus 162 --~~~~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~--V~t~~ 236 (448)
T 3axb_A 162 --GVGDVEGAVL-IRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASA--AVLSD 236 (448)
T ss_dssp --TCCCCCEEEE-ESSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEE--EEETT
T ss_pred --cCCCceEEEE-eCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEE--EEeCC
Confidence 2223344555 57789999999999999999999999996 5999998720000000000000 0033333 77787
Q ss_pred CCeeEE--ecCEEEEcCCCCcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCC-C-----------CCCCCe
Q psy10285 463 GELKTI--TFAICVIAAGAYSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRG-P-----------GVNTPM 528 (673)
Q Consensus 463 G~~~~i--~ad~VVlAtG~~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~-~-----------~~~~~~ 528 (673)
| ++ +||.||+|+|+|+..|++.+++ .+|+.|.|++++.++.+.. . ....|+
T Consensus 237 g---~i~~~Ad~VV~AtG~~s~~l~~~~g~------------~~~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 301 (448)
T 3axb_A 237 G---TRVEVGEKLVVAAGVWSNRLLNPLGI------------DTFSRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPL 301 (448)
T ss_dssp S---CEEEEEEEEEECCGGGHHHHHGGGTC------------CCSEEEEEEEEEEEECCSHHHHHHHHHCCTTSSSSCCE
T ss_pred C---EEeecCCEEEECCCcCHHHHHHHcCC------------CCcccccceEEEEeCCcccccccccccccccccCCCce
Confidence 7 68 9999999999999999988764 4678999999998885431 0 011466
Q ss_pred EEcCCCceEEEecCCceEEecCCCCCCCCCCCCCC--CCChhHHHHhHHHHHhhhccccccccccceeeeeccCC-CCCC
Q psy10285 529 VIDTTGTYFRREGLGNYYICGKSPTPEQEPPVDNL--DVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFN-YFDE 605 (673)
Q Consensus 529 ~~~~~~~y~~~~~~~g~~i~G~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~-t~d~ 605 (673)
+.+....|++|..+++.+++|.+..... +...+. .++.+...+.+++.+.++||.+.+..+...|+|+|+ . |+|+
T Consensus 302 ~~~~~~~y~~p~~~~g~~~iG~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~w~G~r~-~~t~d~ 379 (448)
T 3axb_A 302 IILPKRVLVRPAPREGSFWVQLSDNLGR-PFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGGWAGHYD-ISFDAN 379 (448)
T ss_dssp EEETTTEEEEEETTTTEEEEEECCCTTS-CBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTCCCSEEEEEEEE-EETTSS
T ss_pred EEcCCceEEeecCCCCeEEEecCCcccC-CcccccccCCChHHHHHHHHHHHHHhCcCcccCCcccceEEEec-cccCCC
Confidence 6665678999996426666665554211 111111 233344148899999999999988899999999998 6 9999
Q ss_pred CceeecCCCCCcEEEEEccCCccccchhHHHHHHHHHHHcCCCC------ccCCcccc-ccc-cccCccc
Q psy10285 606 NAIIGLHPSYHNIHFATGFSGHGIQQAPAIGRAVSELILDAEFK------TIDLSRFL-LER-VARRQEA 667 (673)
Q Consensus 606 ~Piig~~~~~~~l~~~~G~~g~G~~~ap~~g~~va~~i~~~~~~------~~d~~~f~-~~R-f~~~~~~ 667 (673)
.|+||++| +|+|+++|++|+||+++|++|+.+|++|.++..+ ..|++.|+ |+| |...+|+
T Consensus 380 ~p~ig~~~--~~l~~a~G~~g~G~~~ap~~g~~la~~i~~~~~~~~~~~~~~~~~~~~~~~R~f~~~~~~ 447 (448)
T 3axb_A 380 PVVFEPWE--SGIVVAAGTSGSGIMKSDSIGRVAAAVALGMESVELYGGVEMPVKWMGLEGRRYEQERLV 447 (448)
T ss_dssp CEEECGGG--CSEEEEECCTTCCGGGHHHHHHHHHHHHTTCSEEECTTSCEEEGGGGSSTTCCCCCCSCC
T ss_pred CcEeeecC--CCEEEEECCCchhHhHhHHHHHHHHHHHcCCCcccccccceecHhHcCccccccccCCcc
Confidence 99999998 8999999999999999999999999999988743 16789999 999 9987764
No 6
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=100.00 E-value=3.5e-36 Score=326.56 Aligned_cols=366 Identities=16% Similarity=0.224 Sum_probs=271.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcchhhHHHHHHHHHHHH
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRENIEMSLFGAEFLRN 323 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~~~~~~~~~~~~~~~ 323 (673)
.+||+|||+|++|+++|+.|+ +.|.+|+|||+.... ...+++..+.+.++..+.......+...+.+.|.+
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La---~~G~~V~vlE~~~~~------~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVA---ERGHRVLVLERHTFF------NENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRA 74 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSCTT------CSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHH---HCCCeEEEEeCCCCC------CCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHH
Confidence 479999999999999999999 889999999998771 11245555555555555555555666777788887
Q ss_pred HHhhccccCCCCCCcceeecCeEEEe-ccc--hHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEeccCC
Q psy10285 324 IKHHCHVIGEDEPDVNFTPNGYLFCA-SQD--GAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEK 400 (673)
Q Consensus 324 l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~--~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~~~~~ 400 (673)
+.+... .++ +...|.+.+. .+. ..+.+.+..+.++..|.+.+.++.+++.+.+|.+.......+++ .+.
T Consensus 75 l~~~~~------~~~-~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~-~~~ 146 (397)
T 2oln_A 75 LESRCE------RRL-IHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFL-QPD 146 (397)
T ss_dssp HHHHHT------CCC-EECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEE-ETT
T ss_pred HHHHhC------ccH-HHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEE-cCC
Confidence 765443 333 5667877776 322 11234555566677898889999998888888766544455666 688
Q ss_pred ceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCC
Q psy10285 401 EGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGA 479 (673)
Q Consensus 401 ~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~ 479 (673)
+++++|..++..|.+.+++.|++++. ++|++|+.+++ ++.|.+.+| +++||.||+|+|+
T Consensus 147 ~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-----------------~v~v~t~~g---~i~a~~VV~A~G~ 206 (397)
T 2oln_A 147 GGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDAD-----------------GVSVTTDRG---TYRAGKVVLACGP 206 (397)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT-----------------EEEEEESSC---EEEEEEEEECCGG
T ss_pred CCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCC-----------------eEEEEECCC---EEEcCEEEEcCCc
Confidence 89999999999999999999999996 59999988764 566777776 7999999999999
Q ss_pred CcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcC---C-----CceEEEecCC---ceEEe
Q psy10285 480 YSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDT---T-----GTYFRREGLG---NYYIC 548 (673)
Q Consensus 480 ~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~---~-----~~y~~~~~~~---g~~i~ 548 (673)
|+..+++.+++ .+|+.+.+++++.++.+... ...|++... . ..|++|..++ +.+++
T Consensus 207 ~s~~l~~~~g~------------~~p~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~ 273 (397)
T 2oln_A 207 YTNDLLEPLGA------------RLAYSVYEMAIAAYRQATPV-TEAPFWFAFQQPTPQDTNLFYGFGHNPWAPGEFVRC 273 (397)
T ss_dssp GHHHHHGGGTC------------CCCEEEEEEEEEEEEBCSCC-SCCCEEEEECCCCSSSCCCEEECCCCSSSSSSEEEE
T ss_pred ChHHHhhhcCC------------CCCeeEEEEEEEEEeecCcc-cCCCEEEEecCCCCcccceEEECCCCCCCCCceEEE
Confidence 99999887763 46789999999888765321 134554321 1 5788887543 15666
Q ss_pred cCCCC--CCCCCCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeecc--CCCCCCCceeecCCC----CCcEEE
Q psy10285 549 GKSPT--PEQEPPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYD--FNYFDENAIIGLHPS----YHNIHF 620 (673)
Q Consensus 549 G~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~--~~t~d~~Piig~~~~----~~~l~~ 620 (673)
|.+.. ....+...+...+.+.. +.+++.+.++||.+.. .+...|+|+++ + |+|+.|+||++|. .+|+|+
T Consensus 274 G~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~p~l~~-~~~~~~~g~~~~p~-t~D~~p~ig~~~~~~~~~~~l~~ 350 (397)
T 2oln_A 274 GPDFEVDPLDHPSAATGVADRRQM-DRLSGWLRDHLPTVDP-DPVRTSTCLAVLPT-DPERQFFLGTARDLMTHGEKLVV 350 (397)
T ss_dssp EECCCCSCCSSGGGCCSSCCHHHH-HHHHHHHHHHCTTBCS-SCSEEEEEEEEEES-STTCCCEEEESTTTSTTGGGEEE
T ss_pred EecCCCCCcCCCccccCCCCHHHH-HHHHHHHHHhCCCCCC-CceeEEEEEecCCc-CCCCCeEeecCCccccCCCCEEE
Confidence 64442 11112112223334444 7889999999999876 77889999986 6 9999999999987 799999
Q ss_pred EEccCCccccchhHHHHHHHHHHHcCCCCccCCccccccccccCc
Q psy10285 621 ATGFSGHGIQQAPAIGRAVSELILDAEFKTIDLSRFLLERVARRQ 665 (673)
Q Consensus 621 ~~G~~g~G~~~ap~~g~~va~~i~~~~~~~~d~~~f~~~Rf~~~~ 665 (673)
++| ||||+++|++|+++|++|.++. ++.|++.|+|+||...+
T Consensus 351 a~G--g~G~~~ap~~g~~la~~i~~~~-~~~~~~~f~~~Rf~~~~ 392 (397)
T 2oln_A 351 YGA--GWAFKFVPLFGRICADLAVEDS-TAYDISRLAPQSALLEH 392 (397)
T ss_dssp EEE--SSCGGGHHHHHHHHHHHHHHSC-CSSCCGGGSCCC-----
T ss_pred EeC--cchhhccHHHHHHHHHHHhCCC-CCCCccccccChhhhhh
Confidence 999 7999999999999999999887 56889999999998754
No 7
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=100.00 E-value=2.6e-36 Score=324.35 Aligned_cols=358 Identities=17% Similarity=0.245 Sum_probs=266.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCc-chhhHHHHHHHHHHH
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSL-RENIEMSLFGAEFLR 322 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~-~~~~~~~~~~~~~~~ 322 (673)
.+||+|||+|++|+++|++|+ +.|.+|+|+|+.... .+.+++....+.++..+.. .....+...+.++|+
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La---~~G~~V~vle~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 72 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYAT---RAGLNVLMTDAHMPP------HQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWD 72 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHH---HTTCCEEEECSSCSS------SSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHH---HCCCeEEEEecCCCC------CCCCCCCCccceeeeccCCCchHHHHHHHHHHHHH
Confidence 479999999999999999999 789999999998761 1112333333344433333 345677788888888
Q ss_pred HHHhhccccCCCCC-CcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEeccCC
Q psy10285 323 NIKHHCHVIGEDEP-DVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEK 400 (673)
Q Consensus 323 ~l~~~~~~~~~~~~-~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~~~~~ 400 (673)
++. ... + +..+...|.+.+. ++. +.++...+.++..+.+.++++.+++.+.+|.+.......+.+ .+.
T Consensus 73 ~l~-~~~------~~~~~~~~~g~l~~~~~~~--~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~-~~~ 142 (372)
T 2uzz_A 73 ELS-RHN------EDDPIFVRSGVINLGPADS--TFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLF-ETD 142 (372)
T ss_dssp HHH-TTC------SSSCSEECCCEEEEEETTC--HHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEE-ESS
T ss_pred HHH-HhC------CCccceeeeceEEEeCCCc--HHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEE-eCC
Confidence 876 332 3 2346678888777 332 345566667778899999999999999998876555555665 689
Q ss_pred ceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCC
Q psy10285 401 EGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGA 479 (673)
Q Consensus 401 ~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~ 479 (673)
+++++|..++..|.+.+++.|++++. ++|++|+.+++ ++.|++.+| +++||.||+|+|+
T Consensus 143 ~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~-----------------~~~v~~~~g---~~~a~~vV~a~G~ 202 (372)
T 2uzz_A 143 SGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDD-----------------GVTIETADG---EYQAKKAIVCAGT 202 (372)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-----------------SEEEEESSC---EEEEEEEEECCGG
T ss_pred CcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCC-----------------EEEEEECCC---eEEcCEEEEcCCc
Confidence 99999999999999999999999995 59999998764 466888888 6999999999999
Q ss_pred CcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCC--CCCCeEE-cC---CCceEEEecCCceEEecCCCC
Q psy10285 480 YSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPG--VNTPMVI-DT---TGTYFRREGLGNYYICGKSPT 553 (673)
Q Consensus 480 ~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~--~~~~~~~-~~---~~~y~~~~~~~g~~i~G~~~~ 553 (673)
|+..|++ .+|+.|.|++++.+..+.... ...|.+. +. ...|++|.. ++.+++|.+..
T Consensus 203 ~s~~l~~----------------~l~~~p~rg~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~y~~p~~-~~~~~iG~~~~ 265 (372)
T 2uzz_A 203 WVKDLLP----------------ELPVQPVRKVFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAE-NDALKIGKHNG 265 (372)
T ss_dssp GGGGTST----------------TCCCEEEECCEEEECCCGGGSTTTTCCEEEEECTTCCEEEEECCS-SSCEEEEESSC
T ss_pred cHHhhcc----------------ccCceEEEEEEEEEEeccccCccccCCEEEEecCCCCeEEecCCC-CCeEEEEecCC
Confidence 9987754 357889999988777542110 1234432 21 246777875 45565555432
Q ss_pred C--CC-CCCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCceeecCCCCCcEEEEEccCCcccc
Q psy10285 554 P--EQ-EPPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIHFATGFSGHGIQ 630 (673)
Q Consensus 554 ~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~~~~G~~g~G~~ 630 (673)
. .. .+...+...+.+.. +.+++.+.++||.+. ++...|+|+|+. |+|+.|+||++|..+|+|+++||+|+|++
T Consensus 266 g~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~P~l~--~~~~~~~g~r~~-t~d~~p~ig~~~~~~~l~~~~G~~g~G~~ 341 (372)
T 2uzz_A 266 GQVIHSADERVPFAEVVSDG-SEAFPFLRNVLPGIG--CCLYGAACTYDN-SPDEDFIIDTLPGHDNTLLITGLSGHGFK 341 (372)
T ss_dssp CEECCSGGGCCCTTTSTTGG-GSSHHHHHHHSCSCC--CEEEECCCEEEE-CTTSCCCEEEETTEEEEEEECCCCSCCGG
T ss_pred CCccCChhhccCCCCCHHHH-HHHHHHHHHHCCCCC--ccceeeEEeecc-CCCCCeEEecCCCCCCEEEEeCCCccchh
Confidence 1 11 00111122222333 778899999999987 677899999986 99999999999988999999999999999
Q ss_pred chhHHHHHHHHHHHcCCCCccCCccccccccc
Q psy10285 631 QAPAIGRAVSELILDAEFKTIDLSRFLLERVA 662 (673)
Q Consensus 631 ~ap~~g~~va~~i~~~~~~~~d~~~f~~~Rf~ 662 (673)
++|++|+.+|++|.++. ++++++.|+|+||.
T Consensus 342 ~ap~~g~~la~~i~~~~-~~~~~~~~~~~Rf~ 372 (372)
T 2uzz_A 342 FASVLGEIAADFAQDKK-SDFDLTPFRLSRFQ 372 (372)
T ss_dssp GHHHHHHHHHHHHTTCC-CSSCCGGGCSTTCC
T ss_pred ccHHHHHHHHHHHhCCC-CCCCccccCcCCCC
Confidence 99999999999999887 56788999999994
No 8
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=100.00 E-value=6.6e-36 Score=322.39 Aligned_cols=360 Identities=23% Similarity=0.322 Sum_probs=271.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccC---cchhhHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFS---LRENIEMSLFGAE 319 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~---~~~~~~~~~~~~~ 319 (673)
..+||+|||||++|+++|+.|+ +.|.+|+|||+... +.+++..+.|.+..... ......+...+.+
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La---~~G~~V~llE~~~~--------~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~ 84 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLA---KENKNTALFESGTM--------GGRTTSAAAGMLGAHAECEERDAFFDFAMHSQR 84 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHH---HTTCCEEEECSSST--------TTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHH---hCCCcEEEEeCCCC--------CcccchhcCceeccCccCCCCcHHHHHHHHHHH
Confidence 5689999999999999999999 78999999999877 45566777777765443 2344566666766
Q ss_pred HHHHHHhhccccCCCCCCcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEecc
Q psy10285 320 FLRNIKHHCHVIGEDEPDVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGL 398 (673)
Q Consensus 320 ~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~~~ 398 (673)
.|..+.+.+. ...+.++.+...|.+.+. ++...+.+....+. ...++++.+++...+|.+.. ....+.+ .
T Consensus 85 ~~~~~~~~~~--~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~p~~~~-~~~~~~~-~ 155 (382)
T 1ryi_A 85 LYKGLGEELY--ALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDL-----DSVSWYSKEEVLEKEPYASG-DIFGASF-I 155 (382)
T ss_dssp HTTTHHHHHH--HHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTS-----TTEEEEEHHHHHHHCTTSCT-TCCEEEE-E
T ss_pred HHHHHHHHHH--HhhCCCcCeeecceEEEEeCHHHHHHHHHHhhc-----CCeEEECHHHHHHhCCCCCc-ccceEEE-e
Confidence 6655543321 112356677788888887 54444433332221 56788999999988887663 3344555 6
Q ss_pred CCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcC
Q psy10285 399 EKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAA 477 (673)
Q Consensus 399 ~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAt 477 (673)
+.++.+++..++..|.+.+++.|++++. ++|++|..+++ ++.|.+.+| +++||.||+|+
T Consensus 156 ~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~-----------------~~~v~~~~g---~~~a~~vV~A~ 215 (382)
T 1ryi_A 156 QDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGE-----------------ALFIKTPSG---DVWANHVVVAS 215 (382)
T ss_dssp TTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSS-----------------SEEEEETTE---EEEEEEEEECC
T ss_pred CCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECC-----------------EEEEEcCCc---eEEcCEEEECC
Confidence 7889999999999999999999999995 59999987663 345777776 79999999999
Q ss_pred CCCcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcCCCceEEEecCCceEEecCCCCCCCC
Q psy10285 478 GAYSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDTTGTYFRREGLGNYYICGKSPTPEQE 557 (673)
Q Consensus 478 G~~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~i~G~~~~~~~~ 557 (673)
|.++..+++.+++ .+|+.+.+++++.++.+... . ..++++ ...|++|.. ++.+++|.+......
T Consensus 216 G~~s~~l~~~~~~------------~~~~~~~~g~~~~~~~~~~~-~-~~~~~~-~~~~~~p~~-~g~~~vG~~~~~~~~ 279 (382)
T 1ryi_A 216 GVWSGMFFKQLGL------------NNAFLPVKGECLSVWNDDIP-L-TKTLYH-DHCYIVPRK-SGRLVVGATMKPGDW 279 (382)
T ss_dssp GGGTHHHHHHTTC------------CCCCEEEEEEEEEEECCSSC-C-CSEEEE-TTEEEEECT-TSEEEEECCCEETCC
T ss_pred ChhHHHHHHhcCC------------CCceeccceEEEEECCCCCC-c-cceEEc-CCEEEEEcC-CCeEEEeecccccCC
Confidence 9999999887763 45788999999888765321 1 233443 368999985 466766665432211
Q ss_pred CCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCceeecCCCCCcEEEEEccCCccccchhHHHH
Q psy10285 558 PPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIHFATGFSGHGIQQAPAIGR 637 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~~~~G~~g~G~~~ap~~g~ 637 (673)
+...+.+. .+.+++.+.++||.+....+...|+|+|++ ++|+.|+||.+|..+|+|+++|++|+|+++||++|+
T Consensus 280 ----~~~~~~~~-~~~l~~~~~~~~p~l~~~~~~~~w~g~~~~-t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~ 353 (382)
T 1ryi_A 280 ----SETPDLGG-LESVMKKAKTMLPAIQNMKVDRFWAGLRPG-TKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGA 353 (382)
T ss_dssp ----CCSCCHHH-HHHHHHHHHHHCGGGGGSEEEEEEEEEEEE-CSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHH
T ss_pred ----CCCCCHHH-HHHHHHHHHHhCCCcCCCceeeEEEEeccc-CCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHH
Confidence 11222333 378899999999999888889999999986 999999999998889999999999999999999999
Q ss_pred HHHHHHHcCCCCccCC-ccccccccccCc
Q psy10285 638 AVSELILDAEFKTIDL-SRFLLERVARRQ 665 (673)
Q Consensus 638 ~va~~i~~~~~~~~d~-~~f~~~Rf~~~~ 665 (673)
.+|++|.++. ++.|+ +.|+|+||..++
T Consensus 354 ~la~~i~~~~-~~~~~~~~~~~~Rf~~~~ 381 (382)
T 1ryi_A 354 LISDLIMNKE-VNQDWLHAFRIDRKEAVN 381 (382)
T ss_dssp HHHHHHTTCC-CCHHHHHHTCSCCC----
T ss_pred HHHHHHhCCC-CCchhhcCCChhhcccCC
Confidence 9999999877 45677 999999998765
No 9
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=100.00 E-value=1.5e-34 Score=334.81 Aligned_cols=364 Identities=14% Similarity=0.139 Sum_probs=269.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcc--hhhHHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLR--ENIEMSLFGAEF 320 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~--~~~~~~~~~~~~ 320 (673)
..+||+|||||++|+++|+.|+ +.|.+|+|+|+... .+.++++.+.|.+.+..... ...++...+...
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La---~~G~~V~vlEk~~~-------~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~ 340 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALL---RRGWQVTLYCADEA-------PALGASGNRQGALYPLLSKHDEALNRFFSNAFTF 340 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHH---TTTCEEEEEESSSS-------SSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHH---HCCCeEEEEeCCCc-------ccccCccCCCceecCcCCCCccHHHHHHHHHHHH
Confidence 4589999999999999999999 89999999999765 35667777778777654332 222222222222
Q ss_pred HHHHHhhccccCCCCCCcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCcce---eeCHhhHHhhCCCCCcccceeEEe
Q psy10285 321 LRNIKHHCHVIGEDEPDVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAKNV---LLGPEQLKAKFPWLNTDDIALACL 396 (673)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~~~---~l~~~~~~~~~p~~~~~~~~~g~~ 396 (673)
..++.+.. +.++.+...|.+.+. +....+.+.. +...+++.+ +++.+++.+..| +. ....+.+
T Consensus 341 ~~~~~~~l------~~~~~~~~~g~l~~~~~~~~~~~~~~----~~~~g~~~~~~~~l~~~~~~~~~~-l~--~~~gg~~ 407 (676)
T 3ps9_A 341 ARRFYDQL------PVKFDHDWCGVTQLGWDEKSQHKIAQ----MLSMDLPAELAVAVEANAVEQITG-VA--TNCSGIT 407 (676)
T ss_dssp HHHHHHHC------CSCCCEECCCEEEECCSHHHHHHHHH----HHTSCCCTTTCEEECHHHHHHHHS-SC--CSSCEEE
T ss_pred HHHHHHHC------CCCcCcCcCCeeeecCCHHHHHHHHH----HHhcCCcHHHhhhCCHHHHHHhhC-CC--ccCCcEE
Confidence 22222222 255667778888887 5554444433 235566554 889988888776 32 2344555
Q ss_pred ccCCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEE
Q psy10285 397 GLEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVI 475 (673)
Q Consensus 397 ~~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVl 475 (673)
.+.+++++|..++..|.+.+++.|++|+. ++|++|..+++ +|.|++.+|. +++||.||+
T Consensus 408 -~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-----------------~v~V~t~~G~--~i~Ad~VVl 467 (676)
T 3ps9_A 408 -YPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDD-----------------CWLLNFAGDQ--QATHSVVVL 467 (676)
T ss_dssp -ETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT-----------------EEEEEETTSC--EEEESEEEE
T ss_pred -ecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCC-----------------eEEEEECCCC--EEECCEEEE
Confidence 68899999999999999999999999995 59999998774 5678888873 799999999
Q ss_pred cCCCCcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcCCCceEEEecC-CceEEecCCCCC
Q psy10285 476 AAGAYSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDTTGTYFRREGL-GNYYICGKSPTP 554 (673)
Q Consensus 476 AtG~~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~-~g~~i~G~~~~~ 554 (673)
|+|+|+..+++.. .+|+.|+|||++.++.+.... ..+.++.. ..|++|... ++.+++|.+.+.
T Consensus 468 AtG~~s~~l~~~~--------------~lpl~p~rGq~~~~~~~~~~~-~l~~~l~~-~~Yl~P~~~~~g~~~iG~t~~~ 531 (676)
T 3ps9_A 468 ANGHQISRFSQTS--------------TLPVYSVAGQVSHIPTTPELA-ELKQVLCY-DGYLTPQNPANQHHCIGASYHR 531 (676)
T ss_dssp CCGGGGGCSTTTT--------------TCSCEEEEEEEEEEECCTTGG-GCCSEEES-SSEECCCBTTTTEEEEECCCEE
T ss_pred CCCcchhcccccc--------------CCcceeecCEEEEECCCcccc-cCCceeEC-CeeeccccCCCCeEEEeeccCC
Confidence 9999988776543 467899999999888643221 12223332 389999851 466777766543
Q ss_pred CCCCCCCCCCCChhHHHHhHHHHHhhhccccc-----cccccceeeeeccCCCCCCCceeecCCC---------------
Q psy10285 555 EQEPPVDNLDVDYEYFNENVWPHLAHRVKAFE-----ELKVSNAWAGYYDFNYFDENAIIGLHPS--------------- 614 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~-----~~~i~~~w~G~~~~~t~d~~Piig~~~~--------------- 614 (673)
... +..++.+.. +++++.+.++||.+. +.++...|+|+|+. |+|+.|+||++|.
T Consensus 532 ~~~----d~~~~~~~~-~~~l~~l~~~~P~l~~~~~~d~~~~~~~~G~R~~-t~D~lPiiG~~p~~~~~~~~y~~l~~~~ 605 (676)
T 3ps9_A 532 GSE----DTAYSEDDQ-QQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCA-TRDHLPMVGNVPDYEATLVEYASLAEQK 605 (676)
T ss_dssp TCC----CCCCCHHHH-HHHHHHHHHHSTTCHHHHTCCCTTCCEEEEEEEE-CTTCCCEEEEEECHHHHHHHTTTTTSCC
T ss_pred CCC----CCCCCHHHH-HHHHHHHHHhCCCccccccCcccccceEEEEeCc-cCCcCCccCcCCChHHHHHHHHhhhccc
Confidence 221 122334444 678888999999875 34578899999986 9999999999886
Q ss_pred --------CCcEEEEEccCCccccchhHHHHHHHHHHHcCCCCccC---CccccccccccCccccccCC
Q psy10285 615 --------YHNIHFATGFSGHGIQQAPAIGRAVSELILDAEFKTID---LSRFLLERVARRQEAREVNI 672 (673)
Q Consensus 615 --------~~~l~~~~G~~g~G~~~ap~~g~~va~~i~~~~~~~~d---~~~f~~~Rf~~~~~~~~~~~ 672 (673)
.+|+|+++||+|+||++||++|+++|++|+|+. .+++ ++.|+|+||..+++.++.++
T Consensus 606 ~~~~~~~~~~~l~~a~G~g~~Gl~~Ap~~ae~lA~~i~g~~-~pl~~~~l~~~~p~Rf~~r~l~~~~~~ 673 (676)
T 3ps9_A 606 DEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEP-IPMDASTLAALNPNRLWVRKLLKGKAV 673 (676)
T ss_dssp TTCCSCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHTTCC-CSSBHHHHHTTCTTHHHHHHHHTTC--
T ss_pred cccccCCCCCCEeeeecccccHHHHHHHHHHHHHHHHcCCC-CCCCHHHHhhhChHHhHHHHHhccCCC
Confidence 689999999999999999999999999999776 5566 79999999999999988765
No 10
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=100.00 E-value=9.5e-35 Score=336.89 Aligned_cols=364 Identities=15% Similarity=0.135 Sum_probs=270.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcc--hhhHH----HHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLR--ENIEM----SLF 316 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~--~~~~~----~~~ 316 (673)
..+||+|||||++|+++|+.|+ +.|.+|+|+|+... .+.++++.+.|.+.+.+... ...++ ...
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La---~~G~~V~vlEk~~~-------~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~ 332 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQ---RRGAVVTLYCADAQ-------PAQGASGNRQGALYPLLNGKNDALETFFTSAFTF 332 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHH---TTTCCEEEEESSSS-------TTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHH---HCCCcEEEEeCCCc-------cccccccccCCEEecCCCCCChHHHHHHHHHHHH
Confidence 4589999999999999999999 89999999999765 35667777777777654332 12222 223
Q ss_pred HHHHHHHHHhhccccCCCCCCcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCcce---eeCHhhHHhhCCCCCcccce
Q psy10285 317 GAEFLRNIKHHCHVIGEDEPDVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAKNV---LLGPEQLKAKFPWLNTDDIA 392 (673)
Q Consensus 317 ~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~~~---~l~~~~~~~~~p~~~~~~~~ 392 (673)
+.++|..+.. .++++.+...|.+.+. ++...+.+.. +...+++.+ +++.+++.+.+| +. ...
T Consensus 333 a~~~~~~l~~-------~~~~~~~~~~g~l~~~~~~~~~~~~~~----~~~~g~~~~~~~~l~~~~~~~~~~-l~--~~~ 398 (689)
T 3pvc_A 333 ARRQYDQLLE-------QGIAFDHQWCGVSQLAFDDKSRGKIEK----MLHTQWPVEFAEAMSREQLSELAG-LD--CAH 398 (689)
T ss_dssp HHHHHHHHHH-------TTCCCCEECCCEEEECCSHHHHHHHHH----HTTSCCCTTTCEEECHHHHHHHHS-SC--CSS
T ss_pred HHHHHHHhhh-------hccccccccCceEEeccCHHHHHHHHH----HHhcCCChHHhhccCHHHHHHhcC-CC--ccc
Confidence 4555555421 2356677778888887 5544443332 234566554 899998888877 43 234
Q ss_pred eEEeccCCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecC
Q psy10285 393 LACLGLEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFA 471 (673)
Q Consensus 393 ~g~~~~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad 471 (673)
.+.+ .+.+++++|..++..|.+.+++.|++|+. ++|++|+.+++ +|.|.+.+|. .+++||
T Consensus 399 gg~~-~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-----------------~v~V~t~~G~-~~i~Ad 459 (689)
T 3pvc_A 399 DGIH-YPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDS-----------------QWQLTFGQSQ-AAKHHA 459 (689)
T ss_dssp CEEE-ETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSS-----------------SEEEEEC-CC-CCEEES
T ss_pred ceEE-ecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCC-----------------eEEEEeCCCc-EEEECC
Confidence 4555 68899999999999999999999999985 59999998774 4668888872 168999
Q ss_pred EEEEcCCCCcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcCCCceEEEec-CCceEEecC
Q psy10285 472 ICVIAAGAYSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDTTGTYFRREG-LGNYYICGK 550 (673)
Q Consensus 472 ~VVlAtG~~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~-~~g~~i~G~ 550 (673)
.||+|+|+|+..++..+ .+|+.|+|||++.++.+.... ..+.+++. ..|++|.. .++.+++|.
T Consensus 460 ~VVlAtG~~s~~l~~~~--------------~lpl~p~rGq~~~~~~~~~~~-~l~~v~~~-~~Yl~P~~~~~g~~~iGa 523 (689)
T 3pvc_A 460 TVILATGHRLPEWEQTH--------------HLPLSAVRGQVSHIPTTPVLS-QLQQVLCY-DGYLTPVNPANQHHCIGA 523 (689)
T ss_dssp EEEECCGGGTTCSTTTT--------------TSCCEEEEEEEEEEECCTTGG-GCCSEEES-SSEECCCBTTTTEEEEEC
T ss_pred EEEECCCcchhcccccc--------------CCccccccCcEEEECCCCccc-cCCeeEeC-CceEccccCCCCeEEEEE
Confidence 99999999988776543 357899999999988653221 12333333 38999985 146677776
Q ss_pred CCCCCCCCCCCCCCCChhHHHHhHHHHHhhhccccc-----cccccceeeeeccCCCCCCCceeecCCC-----------
Q psy10285 551 SPTPEQEPPVDNLDVDYEYFNENVWPHLAHRVKAFE-----ELKVSNAWAGYYDFNYFDENAIIGLHPS----------- 614 (673)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~-----~~~i~~~w~G~~~~~t~d~~Piig~~~~----------- 614 (673)
+.+.... +..++.+.. +++++.+.+++|.+. +.++...|+|+|+. |+|+.|+||++|.
T Consensus 524 t~~~~~~----d~~~~~~~~-~~ll~~l~~~~P~l~~~~~~~~~~~~~w~G~R~~-t~D~lPiiG~~p~~~~~~~~y~~l 597 (689)
T 3pvc_A 524 SYQRGDI----ATDFRLTEQ-QENRERLLRCLPQVSWPQQVDVSDNQARCGVRCA-IRDHLPMVGAVPDYAATLAQYQDL 597 (689)
T ss_dssp CCEETBC----CCCCCHHHH-HHHHHHHHHHCTTCSGGGGCCCTTCCEEEEEEEE-CTTSCCEEEEEECHHHHHHHSTTH
T ss_pred eccCCCC----CCCCCHHHH-HHHHHHHHHhCCCccccccccccccceeEEEeee-cCCCCcccCcCCCHHHHHHHHHhh
Confidence 6543221 122334444 778889999999876 35678899999986 9999999999886
Q ss_pred --------------------CCcEEEEEccCCccccchhHHHHHHHHHHHcCCCCccC---CccccccccccCccccccC
Q psy10285 615 --------------------YHNIHFATGFSGHGIQQAPAIGRAVSELILDAEFKTID---LSRFLLERVARRQEAREVN 671 (673)
Q Consensus 615 --------------------~~~l~~~~G~~g~G~~~ap~~g~~va~~i~~~~~~~~d---~~~f~~~Rf~~~~~~~~~~ 671 (673)
.+|+|+++||+|+||++||++|++||++|+|+. .++| ++.|+|+||..+++.++.+
T Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~G~g~~Gl~~ap~~ae~lA~~i~g~~-~p~~~~~l~~~~p~Rf~~r~l~~~~~ 676 (689)
T 3pvc_A 598 SRRIQHGGESEVNDIAVAPVWPELFMVGGLGSRGLCSAPLVAEILAAQMFGEP-LPLDAKTLAALNPNRFWIRKLLKGRP 676 (689)
T ss_dssp HHHC--------CCCCCCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHTTCTTHHHHHHHTTC--
T ss_pred hccccccccccccccccCCCCCChHHhhcccccHHHHHHHHHHHHHHHHcCCC-CCCCHHHHhhcChhHHHHHHHhcCCc
Confidence 589999999999999999999999999999776 5677 7999999999999988765
Q ss_pred C
Q psy10285 672 I 672 (673)
Q Consensus 672 ~ 672 (673)
+
T Consensus 677 ~ 677 (689)
T 3pvc_A 677 V 677 (689)
T ss_dssp -
T ss_pred c
Confidence 4
No 11
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=100.00 E-value=2.3e-33 Score=332.02 Aligned_cols=367 Identities=20% Similarity=0.303 Sum_probs=280.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCC-eEEEEecCCCCCCCcccccccccccccCceecccCcchhhHHHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRENIEMSLFGAEFL 321 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~-~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~~~~~~~~~~~~~ 321 (673)
..+||+|||||++|+++|++|+ +.|. +|+|||+.... ...++++.+.|.+...........+...+.++|
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La---~~G~~~V~vlE~~~~~------~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~ 73 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELV---TRGWNNITVLDQGPLN------MPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKL 73 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHH---HTTCCCEEEECSSCTT------CCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHH---hCCCCcEEEEeCCCCC------CCcccceeCCceeecCCCCHHHHHHHHHHHHHH
Confidence 4579999999999999999999 7898 99999998761 124455556666655444444455666777777
Q ss_pred HHHHhhccccCCCCCCcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEeccCC
Q psy10285 322 RNIKHHCHVIGEDEPDVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEK 400 (673)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~~~~~ 400 (673)
.++.. .+ ...+...|.+.+. ++...+.+.+..+..+..|++.++++++++.+.+|.+.......+++ .+.
T Consensus 74 ~~l~~-------~~-~~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~-~~~ 144 (830)
T 1pj5_A 74 LSLTE-------DG-VSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLH-VPS 144 (830)
T ss_dssp HHCEE-------TT-EESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEE-ETT
T ss_pred HHHHh-------hC-CCCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEE-ECC
Confidence 76532 11 2347788888888 66666777777777888999999999999999999887665666666 688
Q ss_pred ceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCC
Q psy10285 401 EGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGA 479 (673)
Q Consensus 401 ~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~ 479 (673)
+++++|..++..|.+.+++.|++|+. ++|++|..++ +++.+ |.+.+| +++||.||+|+|+
T Consensus 145 ~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--------------~~v~~--V~t~~G---~i~Ad~VV~AaG~ 205 (830)
T 1pj5_A 145 DGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG--------------GRVTG--VQTADG---VIPADIVVSCAGF 205 (830)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--------------TEEEE--EEETTE---EEECSEEEECCGG
T ss_pred CceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC--------------CEEEE--EEECCc---EEECCEEEECCcc
Confidence 99999999999999999999999995 6999998865 33333 778777 7999999999999
Q ss_pred CcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCC-C-------CCCCCeEEcC-CCceEEEecCCceEEecC
Q psy10285 480 YSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRG-P-------GVNTPMVIDT-TGTYFRREGLGNYYICGK 550 (673)
Q Consensus 480 ~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~-~-------~~~~~~~~~~-~~~y~~~~~~~g~~i~G~ 550 (673)
|+..+++++|+ .+|+.|++++++.+..... . ....|++.+. ...|++|.+ ++.++++.
T Consensus 206 ~s~~l~~~~g~------------~~pl~p~~g~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~~~~y~r~~~-~~l~iG~~ 272 (830)
T 1pj5_A 206 WGAKIGAMIGM------------AVPLLPLAHQYVKTTPVPAQQGRNDQPNGARLPILRHQDQDLYYREHG-DRYGIGSY 272 (830)
T ss_dssp GHHHHHHTTTC------------CCCCEEEEEEEEEESCCGGGTTTSCTTTCCCSCEEEEGGGTEEEEEET-TEEEEEEC
T ss_pred chHHHHHHhCC------------CccceeceeEEEEEecCcccccccccccCCCCCeEEcCCCCEEEEEeC-CeEEEecc
Confidence 99999887764 5678999998887764211 0 1234665433 367999985 33334443
Q ss_pred CCCC-------CCC-----C----CCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCceeecCCC
Q psy10285 551 SPTP-------EQE-----P----PVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAIIGLHPS 614 (673)
Q Consensus 551 ~~~~-------~~~-----~----~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~ 614 (673)
.+.. ... . .......+.+.+ +.+++.+.++||.+.+..+.+.|+|+|++ |+|+.|+||++|.
T Consensus 273 ~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~P~l~~~~i~~~w~G~r~~-t~D~~PiIG~~p~ 350 (830)
T 1pj5_A 273 AHRPMPVDVDTLGAYAPETVSEHHMPSRLDFTLEDF-LPAWEATKQLLPALADSEIEDGFNGIFSF-TPDGGPLLGESKE 350 (830)
T ss_dssp CSCCCBCCGGGSCCCCGGGCBTTBSTTEECCCHHHH-HHHHHHHHHHCGGGGGSCEEEEEEEEEEE-CTTSCCEEEECSS
T ss_pred CCCCcccCcccccccccccccccccccccCCCHHHH-HHHHHHHHHhCccccccCcceEEEeeccc-CCCCCeeeccCCC
Confidence 2211 000 0 001123344555 78889999999999999999999999986 9999999999998
Q ss_pred CCcEEEEEccCCccccchhHHHHHHHHHHHcCCCCccCCccccccccccCc
Q psy10285 615 YHNIHFATGFSGHGIQQAPAIGRAVSELILDAEFKTIDLSRFLLERVARRQ 665 (673)
Q Consensus 615 ~~~l~~~~G~~g~G~~~ap~~g~~va~~i~~~~~~~~d~~~f~~~Rf~~~~ 665 (673)
.+|+|+++|+ |++++|++|+++|++|.++. +++|++.|+|.||...+
T Consensus 351 ~~gl~va~G~---G~~~ap~~g~~la~li~~~~-~~~dl~~~~~~Rf~~~~ 397 (830)
T 1pj5_A 351 LDGFYVAEAV---WVTHSAGVAKAMAELLTTGR-SETDLGECDITRFEDVQ 397 (830)
T ss_dssp SBTEEEEESC---CGGGHHHHHHHHHHHHHHSS-CSSCCTTTBGGGCCGGG
T ss_pred CCCEEEEECc---hHHhhHHHHHHHHHHHhCCC-CCccccccChhhhcccc
Confidence 9999999997 79999999999999999887 56788999999997644
No 12
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=100.00 E-value=1.7e-33 Score=309.48 Aligned_cols=360 Identities=18% Similarity=0.194 Sum_probs=257.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCC-eEEEEecCCCCCCCcccccccccc-cccCceecccCcchhh------HHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDFTVNYDLDEYARASTT-LSVGGLRQQFSLRENI------EMS 314 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~-~v~~ie~~~~~~~~~~~~~~~st~-~~~g~i~~~~~~~~~~------~~~ 314 (673)
..+||+|||+|++|+++|++|+ +.|. +|+|||+... .+..++. .....+...+...... .+.
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La---~~G~~~V~vlE~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 74 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLA---RRGYTNVTVLDPYPV-------PSAISAGNDVNKVISSGQYSNNKDEIEVNEILA 74 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHH---HTTCCCEEEEESSCS-------SCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHH---HcCCCcEEEEeCCCC-------CCCCccCCCCccEEEeccCCchhhhcchhHHHH
Confidence 4579999999999999999999 7899 9999999887 2222221 1222333334444444 666
Q ss_pred HHHHHHHHHHHhhccccCCCCCCcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCcc-eeeCHhhHHhhCCC-CCcccc
Q psy10285 315 LFGAEFLRNIKHHCHVIGEDEPDVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAKN-VLLGPEQLKAKFPW-LNTDDI 391 (673)
Q Consensus 315 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~~-~~l~~~~~~~~~p~-~~~~~~ 391 (673)
..+.+.|+.+. ..++.+...|.+.+. .....+.+.+.... ..+... ++++.+++.+.+|. +....+
T Consensus 75 ~~~~~~~~~~~---------~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~--~~g~~~~~~l~~~~~~~~~p~~l~~~~~ 143 (438)
T 3dje_A 75 EEAFNGWKNDP---------LFKPYYHDTGLLMSACSQEGLDRLGVRVRP--GEDPNLVELTRPEQFRKLAPEGVLQGDF 143 (438)
T ss_dssp HHHHHHHHHCT---------TTGGGEECCCEEEEECSHHHHHHHHHHHCG--GGCTTCEEECSHHHHHTTSCTTTSCSCC
T ss_pred HHHHHHHhhCc---------cccCcEeccceEEEecCcchHHHHHHHHhh--cccCCceecCCHHHHHHhCCcccccCCC
Confidence 67777776642 134567788888887 55555555444433 456666 77899999988886 533334
Q ss_pred ee--EEeccCCc-eeeCHHHHHHHHHHHHHHcCCeEEE-e---ceeEEEecCCccccccCCCCCCccceeeEEEEcCCCC
Q psy10285 392 AL--ACLGLEKE-GWFDPWLYLNAVKKKAISLGAEYVR-G---EVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGE 464 (673)
Q Consensus 392 ~~--g~~~~~~~-g~i~~~~~~~~l~~~~~~~Gv~i~~-~---~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~ 464 (673)
.. +.+ .+.. +++++..++..|.+.+++.|++|+. + +|++|..++ +++.+ |++.+|
T Consensus 144 ~g~~g~~-~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--------------~~v~g--V~t~~G- 205 (438)
T 3dje_A 144 PGWKGYF-ARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--------------NDVKG--AVTADG- 205 (438)
T ss_dssp TTCEEEE-ESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--------------TEEEE--EEETTT-
T ss_pred CCceEEE-eCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--------------CeEEE--EEECCC-
Confidence 44 555 6778 9999999999999999999999995 5 899998876 34444 888888
Q ss_pred eeEEecCEEEEcCCCCcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCC---CCCCCeEEcC-CCceEEEe
Q psy10285 465 LKTITFAICVIAAGAYSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGP---GVNTPMVIDT-TGTYFRRE 540 (673)
Q Consensus 465 ~~~i~ad~VVlAtG~~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~---~~~~~~~~~~-~~~y~~~~ 540 (673)
.+++||.||+|+|+|+..|++ ++ .++.|.+.++..+..+... ....|++.+. ...|++|.
T Consensus 206 -~~i~Ad~VV~AtG~~s~~l~~-l~--------------~~~~p~~~~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~p~ 269 (438)
T 3dje_A 206 -KIWRAERTFLCAGASAGQFLD-FK--------------NQLRPTAWTLVHIALKPEERALYKNIPVIFNIERGFFFEPD 269 (438)
T ss_dssp -EEEECSEEEECCGGGGGGTSC-CT--------------TCCEEEEEEEEEEECCGGGHHHHTTCCEEEETTTEEECSCC
T ss_pred -CEEECCEEEECCCCChhhhcC-cc--------------cceeeEEEEEEEEEcChHHhhhhcCCCEEEECCCceecCCC
Confidence 489999999999999998875 32 2455665555555543211 1245676543 45677777
Q ss_pred cCCceEEecC-----CCCCC-------CCCCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCce
Q psy10285 541 GLGNYYICGK-----SPTPE-------QEPPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAI 608 (673)
Q Consensus 541 ~~~g~~i~G~-----~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Pi 608 (673)
.+++.+++|. ..... ..|.. ..... ....+.+++.+.++||.|.+..+.+.|+|+|+. |+|+.|+
T Consensus 270 ~~~~~l~i~~~~~g~~~~~~~~~~~~~~~p~~-~~~~~-~~~~~~l~~~~~~~~P~l~~~~~~~~~~g~~~~-t~D~~pi 346 (438)
T 3dje_A 270 EERGEIKICDEHPGYTNMVQSADGTMMSIPFE-KTQIP-KEAETRVRALLKETMPQLADRPFSFARICWCAD-TANREFL 346 (438)
T ss_dssp TTTCEEEEEECCSCEECEEECTTCCEEECCCC-CSSCB-HHHHHHHHHHHHHHCGGGTTCCCSEEEEEEEEE-CTTSCCE
T ss_pred CCCCeEEEEeCCCCccCCccCCCcccccCCcc-cccCC-HHHHHHHHHHHHHhCcccccCCcceeeEEEeCc-CCCCCeE
Confidence 5456565532 11100 00100 01122 333478889999999999999999999999986 9999999
Q ss_pred eecCCCCCcEEEEEccCCccccchhHHHHHHHHHHHcCCCCccCCcccccccc
Q psy10285 609 IGLHPSYHNIHFATGFSGHGIQQAPAIGRAVSELILDAEFKTIDLSRFLLERV 661 (673)
Q Consensus 609 ig~~~~~~~l~~~~G~~g~G~~~ap~~g~~va~~i~~~~~~~~d~~~f~~~Rf 661 (673)
||++|..+|+|+++||+||||+++|++|+.||++|.+... +...+.|+++|.
T Consensus 347 ig~~p~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~g~~~-~~~~~~~~~~~~ 398 (438)
T 3dje_A 347 IDRHPQYHSLVLGCGASGRGFKYLPSIGNLIVDAMEGKVP-QKIHELIKWNPD 398 (438)
T ss_dssp EEECSSCTTEEEEECCTTCCGGGTTTHHHHHHHHHHTCCC-HHHHHHHSCCHH
T ss_pred EeecCCCCCEEEEECCCCcchhhhHHHHHHHHHHHhCCCC-hhhccccCCCCc
Confidence 9999999999999999999999999999999999998763 344677777775
No 13
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=100.00 E-value=1.1e-32 Score=295.09 Aligned_cols=348 Identities=16% Similarity=0.125 Sum_probs=263.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcc---hhhHHHHHHHHH
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLR---ENIEMSLFGAEF 320 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~---~~~~~~~~~~~~ 320 (673)
.+||+|||+|++|+++|+.|+ +.|.+|+|+|+.+. .+.++++.+.|.+...+..+ ....+...+.+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La---~~G~~V~vlE~~~~-------~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 73 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALA---AGGHEVLVAEAAEG-------IGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHL 73 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHH---HTTCCEEEECSSSS-------SSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHH---hCCCeEEEEeCCCC-------CCCccCcCCccccccCccCCCCCHhHHHHHHHHHH
Confidence 479999999999999999999 88999999999864 25667777777765543322 234556666677
Q ss_pred HHHHHhhccccCCCCCCcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCc-ceeeCHhhHHhhCCCCCcccceeEEecc
Q psy10285 321 LRNIKHHCHVIGEDEPDVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAK-NVLLGPEQLKAKFPWLNTDDIALACLGL 398 (673)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~-~~~l~~~~~~~~~p~~~~~~~~~g~~~~ 398 (673)
+.++..... +.+...|.+.+. +......+....+..+..+++ .++++.+++.+.+|.+. ...+.+ .
T Consensus 74 ~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~---~~~~~~-~ 141 (369)
T 3dme_A 74 LYEYCAARG--------VPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALH---CTAALV-S 141 (369)
T ss_dssp HHHHHHHHT--------CCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCC---CSEEEE-E
T ss_pred HHHHHHHcC--------CCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCce---eeeeeE-C
Confidence 777665443 236678888887 566666677777778888998 99999999999988774 234555 6
Q ss_pred CCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcC
Q psy10285 399 EKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAA 477 (673)
Q Consensus 399 ~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAt 477 (673)
+..+.+++..++..|.+.+++.|++++. ++|++|+.+++ . .+.|.+.+|+..+++||.||+|+
T Consensus 142 ~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~--------------~--~~~v~~~~g~~~~~~a~~VV~A~ 205 (369)
T 3dme_A 142 PSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPE--------------G--GFELDFGGAEPMTLSCRVLINAA 205 (369)
T ss_dssp TTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT--------------S--SEEEEECTTSCEEEEEEEEEECC
T ss_pred CCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC--------------c--eEEEEECCCceeEEEeCEEEECC
Confidence 8899999999999999999999999994 69999998764 1 25578888755689999999999
Q ss_pred CCCcHHHHHHc-CCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcC----CCceEEEecCCceEEecCCC
Q psy10285 478 GAYSGQVARML-KIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDT----TGTYFRREGLGNYYICGKSP 552 (673)
Q Consensus 478 G~~s~~l~~~~-g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~y~~~~~~~g~~i~G~~~ 552 (673)
|.|+..|++++ |+..+ ...++.|.|++.+.++.+. + ....++..+ ...++.+.. ++.+++|.+.
T Consensus 206 G~~s~~l~~~~~g~~~~--------~~~~i~p~rG~~~~~~~~~-~-~~~~~~~~p~~~~~~~~~~~~~-~g~~~iG~t~ 274 (369)
T 3dme_A 206 GLHAPGLARRIEGIPRD--------SIPPEYLCKGSYFTLAGRA-P-FSRLIYPVPQHAGLGVHLTLDL-GGQAKFGPDT 274 (369)
T ss_dssp GGGHHHHHHTEETSCGG--------GSCCCEEEEEEEEECSSSC-S-CSSEEEECTTCSSCCCCEEECT-TSCEEECCCC
T ss_pred CcchHHHHHHhcCCCcc--------ccceeeecceEEEEECCCC-c-cCceeecCCCCCCceEEEeCcc-CCcEEECCCc
Confidence 99999999988 76421 1347899999988777541 1 123333322 246677664 4566666554
Q ss_pred CCCCCCCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCC----CCCCCcee-ec-CCCCCcEEEEEccCC
Q psy10285 553 TPEQEPPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFN----YFDENAII-GL-HPSYHNIHFATGFSG 626 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~----t~d~~Pii-g~-~~~~~~l~~~~G~~g 626 (673)
+.... .+..++.+.+ +.+++.+.++||.+.+..+...|+|+||.. ++|+.|+| |+ +|..+|+|+++||++
T Consensus 275 e~~~~---~~~~~~~~~~-~~l~~~~~~~~P~l~~~~v~~~w~G~Rp~~~~~~~~d~~p~i~g~~~~~~~~l~~~~G~~~ 350 (369)
T 3dme_A 275 EWIAT---EDYTLDPRRA-DVFYAAVRSYWPALPDGALAPGYTGIRPKISGPHEPAADFAIAGPASHGVAGLVNLYGIES 350 (369)
T ss_dssp EEESS---CCCCCCGGGG-GGHHHHHHTTCTTCCTTCCEEEEEEEEEESSCTTSCCCCCEEECHHHHCCTTEEEEECCCT
T ss_pred ccccc---cccccCHHHH-HHHHHHHHHHCCCCChhhceecceeccccccCCCCCcCCeEEecccccCCCCEEEEeCCCC
Confidence 32111 1122333444 888999999999999999999999999963 26889999 87 577899999999999
Q ss_pred ccccchhHHHHHHHHHHH
Q psy10285 627 HGIQQAPAIGRAVSELIL 644 (673)
Q Consensus 627 ~G~~~ap~~g~~va~~i~ 644 (673)
+|++++|++|+.++++|.
T Consensus 351 ~G~t~ap~~a~~~a~~i~ 368 (369)
T 3dme_A 351 PGLTASLAIAEETLARLA 368 (369)
T ss_dssp THHHHHHHHHHHHHHHHC
T ss_pred chHhccHHHHHHHHHHhh
Confidence 999999999999999984
No 14
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.97 E-value=4.6e-31 Score=281.49 Aligned_cols=316 Identities=15% Similarity=0.180 Sum_probs=225.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCC------CeEEEEecCCCCCCCcccccccccccccCceecccCcchhhHHHHHHH
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDG------CRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRENIEMSLFGA 318 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g------~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~~~~~~~~~~ 318 (673)
+||+|||||++|+++|++|+ +.| .+|+|+|+... ..++|..++|.+.+.+.......+..++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La---~~G~~~~p~~~V~vlE~~~~--------~~~aS~~~~g~~~~~~~~~~~~~~~~~~~ 69 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIH---ERYHSVLQPLDIKVYADRFT--------PLTTTDVAAGLWQPYLSDPNNPQEADWSQ 69 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHH---HHHTTTSSSCEEEEEESSCG--------GGSGGGTCCCBCCCCSSCCSCTHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHH---HhccccCCCceEEEEECCCC--------CCCccccCcceeecccCCCchHHHHHHHH
Confidence 48999999999999999999 565 89999999887 56777888888876443332333333444
Q ss_pred HHHHHHHhhccccCCC-CCCcce-eecCeEEEeccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEe
Q psy10285 319 EFLRNIKHHCHVIGED-EPDVNF-TPNGYLFCASQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACL 396 (673)
Q Consensus 319 ~~~~~l~~~~~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~ 396 (673)
+.++.+.+... +. ++++.+ ...|.+........ ..+++.+.++++++.+++ +.+|. +..+.+
T Consensus 70 ~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~~~~~~l~~~e~-~~~p~-----~~~~~~ 133 (351)
T 3g3e_A 70 QTFDYLLSHVH---SPNAENLGLFLISGYNLFHEAIPD-------PSWKDTVLGFRKLTPREL-DMFPD-----YGYGWF 133 (351)
T ss_dssp HHHHHHHTTTT---STTHHHHTEEEEEEEEEESSCCCC-------CGGGGTSEEEEECCHHHH-TTCTT-----CCEEEE
T ss_pred HHHHHHHHHhh---ccCCCCccEEEEEEEEEecCCccc-------cCHHHhCCCceECCHHHh-ccCCC-----CceEEE
Confidence 44444433221 11 123444 34455554433221 123346777889999888 45653 334555
Q ss_pred ccCCceeeCHHHHHHHHHHHHHHcCCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEc
Q psy10285 397 GLEKEGWFDPWLYLNAVKKKAISLGAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIA 476 (673)
Q Consensus 397 ~~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlA 476 (673)
.+ +++++|..++..|.+.+++.|++|++++|++|+..+ .++||.||+|
T Consensus 134 -~~-~~~v~p~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~------------------------------~~~a~~VV~A 181 (351)
T 3g3e_A 134 -HT-SLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVA------------------------------REGADVIVNC 181 (351)
T ss_dssp -EE-EEEECHHHHHHHHHHHHHHTTCEEEECCCCCHHHHH------------------------------HTTCSEEEEC
T ss_pred -ec-ceEEcHHHHHHHHHHHHHHCCCEEEEEEeCCHHHhh------------------------------cCCCCEEEEC
Confidence 45 689999999999999999999999887777664322 2579999999
Q ss_pred CCCCcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEc------CCCceEEEecCCceEEecC
Q psy10285 477 AGAYSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVID------TTGTYFRREGLGNYYICGK 550 (673)
Q Consensus 477 tG~~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~------~~~~y~~~~~~~g~~i~G~ 550 (673)
+|.|+..+++ .+|+.|.|+|++.++.+. ...+++.. ....|++|.. + .+++|+
T Consensus 182 ~G~~s~~l~~----------------~~~l~p~rg~~~~~~~~~---~~~~~~~~~~~~~~~~~~y~~p~~-~-~~~iGg 240 (351)
T 3g3e_A 182 TGVWAGALQR----------------DPLLQPGRGQIMKVDAPW---MKHFILTHDPERGIYNSPYIIPGT-Q-TVTLGG 240 (351)
T ss_dssp CGGGGGGTSC----------------CTTCEEEEEEEEEEECTT---CCSEEEECCTTTCTTCSCEEEECS-S-CEEEEC
T ss_pred CCcChHhhcC----------------CCceeecCCcEEEEeCCC---cceEEEeccccCCCCceeEEEeCC-C-cEEEee
Confidence 9999987753 257899999999888642 23444422 1358999986 3 455554
Q ss_pred CCCCCCCCCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCce----eecCCCCCcEEEEEccCC
Q psy10285 551 SPTPEQEPPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAI----IGLHPSYHNIHFATGFSG 626 (673)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Pi----ig~~~~~~~l~~~~G~~g 626 (673)
+.+.... +...+.+.+ +.+++.+.++||.+.+.++.+.|+|+|++ |+| .|+ ||++|..+|+|+++||+|
T Consensus 241 ~~~~~~~----~~~~~~~~~-~~l~~~~~~~~P~l~~~~i~~~w~G~r~~-t~D-~p~~~~~ig~~~~~~~~~~~~G~~g 313 (351)
T 3g3e_A 241 IFQLGNW----SELNNIQDH-NTIWEGCCRLEPTLKNARIIGERTGFRPV-RPQ-IRLEREQLRTGPSNTEVIHNYGHGG 313 (351)
T ss_dssp CCEETCC----CCSCCHHHH-HHHHHHHHHHCGGGGGCEEEEEEEEEEEE-CSS-CEEEEEEECCSSSCEEEEEEECCTT
T ss_pred eeecCCC----CCCCCHHHH-HHHHHHHHHhCCCccCCcEeeeeEeeCCC-CCC-ccceeeeccCCCCCCeEEEEeCCCc
Confidence 4432211 122334444 88999999999999999999999999996 999 874 777887899999999999
Q ss_pred ccccchhHHHHHHHHHHHcCC
Q psy10285 627 HGIQQAPAIGRAVSELILDAE 647 (673)
Q Consensus 627 ~G~~~ap~~g~~va~~i~~~~ 647 (673)
+|++++|++|+.+|++|.+.-
T Consensus 314 ~G~~~ap~~g~~la~li~~~~ 334 (351)
T 3g3e_A 314 YGLTIHWGCALEAAKLFGRIL 334 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred chHhhhHHHHHHHHHHHHHHH
Confidence 999999999999999998643
No 15
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.96 E-value=3.9e-29 Score=272.02 Aligned_cols=325 Identities=16% Similarity=0.167 Sum_probs=224.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccC--CCeEEEEecCCCCCCCcccccccccccccC-ce--ecccCcchhhHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLD--GCRVAVVDRDFTVNYDLDEYARASTTLSVG-GL--RQQFSLRENIEMSLFG 317 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~--g~~v~~ie~~~~~~~~~~~~~~~st~~~~g-~i--~~~~~~~~~~~~~~~~ 317 (673)
..+||+|||+|++|+++|+.|+ +. |.+|+|||+... ..+++..+.| .+ ...+... ...+...+
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La---~~~pG~~V~vlE~~~~--------~~~~s~~~~g~~i~~~~~~~~~-~~~l~~~~ 102 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLR---QLAPGRSLLLVEEGGL--------PNEEGATILAPGVWTAQDIPAG-QEAQAEWT 102 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHH---HHCTTSCEEEECSSCS--------SCTTSHHHHCCCEECGGGCCTT-CHHHHHHH
T ss_pred CcCCEEEECCcHHHHHHHHHHH---hcCCCCeEEEEeCCCC--------CCcchhccCCcceeecccCCch-HHHHHHHH
Confidence 4589999999999999999999 66 999999999876 4455555555 34 2222222 45566666
Q ss_pred HHHHHHHHhhccccCCCCC--CcceeecCeEEEeccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCc----ccc
Q psy10285 318 AEFLRNIKHHCHVIGEDEP--DVNFTPNGYLFCASQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNT----DDI 391 (673)
Q Consensus 318 ~~~~~~l~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~----~~~ 391 (673)
.++|.+ ... . ++.+...|.+...... +..+ +++.+++...+|.+.. ...
T Consensus 103 ~~~~~~---~~~------~~~~~~~~~~g~l~~~~~~------------~~~g----~l~~~~~~~~~p~~~~~~~~~~~ 157 (405)
T 3c4n_A 103 REQLLG---ALG------SGKTLEVEDRPLLHLLPAG------------EGSG----LTPTLDALADFPEALALLDPARL 157 (405)
T ss_dssp HHHHHT---GGG------SSCCCCEEECCEEEEESSC------------CSSS----CEEHHHHTTTCHHHHTTSCTTTS
T ss_pred HHHHHH---HhC------CCCCCcEEeeCeEEehhhH------------hHCC----CCCHHHHHHhCCCccccccCCcc
Confidence 666655 111 3 4567777877644110 0111 4455555544443321 234
Q ss_pred eeEEeccCCceeeCHHHHHHHHHHHHHHcCCeEEE-ecee---------EEEecCCccccccCCCCCCccceeeEEEEcC
Q psy10285 392 ALACLGLEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVV---------DFLRRRNNQVHYEGYDDGEYHSVNECVVRDE 461 (673)
Q Consensus 392 ~~g~~~~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~---------~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~ 461 (673)
..+.+ .+..+++++..++..|.+.+++.|++++. ++|+ +|..+++ .+.|.+.
T Consensus 158 ~~~~~-~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~-----------------~v~v~~~ 219 (405)
T 3c4n_A 158 PVARV-DPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNT-----------------HQIVVHE 219 (405)
T ss_dssp CEEEE-ETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC------------------------CBC
T ss_pred eEEEE-cCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCC-----------------eEEEEEC
Confidence 44555 68899999999999999999999999995 5888 7776552 3346777
Q ss_pred CCCeeEEecCEEEEcCCCCcHHHHH-HcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcCCCceEEEe
Q psy10285 462 KGELKTITFAICVIAAGAYSGQVAR-MLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDTTGTYFRRE 540 (673)
Q Consensus 462 ~G~~~~i~ad~VVlAtG~~s~~l~~-~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 540 (673)
+| +++||.||+|+|.|+..|++ .+++ .+|+.+.+++.+.++.+.. ...+++.+ ...|++|.
T Consensus 220 ~g---~i~a~~VV~A~G~~s~~l~~~~~g~------------~~~~~~~~g~~~~~~~~~~--~~~~~~~~-~~~y~~p~ 281 (405)
T 3c4n_A 220 TR---QIRAGVIIVAAGAAGPALVEQGLGL------------HTRHGRAYRQFPRLDLLSG--AQTPVLRA-SGLTLRPQ 281 (405)
T ss_dssp CE---EEEEEEEEECCGGGHHHHHHHHHCC------------CCCCEEEEEECCEECSCCC--TTCCEEEE-TTEEEEEE
T ss_pred Cc---EEECCEEEECCCccHHHHHHHhcCC------------CCCcccceeEEEEECCCCc--cCCCeEEC-CcEEEEEc
Confidence 66 79999999999999999988 7774 4567888998877765422 12355543 57899999
Q ss_pred cCCceEEecCCCC--CCC-CCC-----CCCCCCChhHHHHhHHHHHhhhcccccccc---------ccceeeeeccCCCC
Q psy10285 541 GLGNYYICGKSPT--PEQ-EPP-----VDNLDVDYEYFNENVWPHLAHRVKAFEELK---------VSNAWAGYYDFNYF 603 (673)
Q Consensus 541 ~~~g~~i~G~~~~--~~~-~~~-----~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~---------i~~~w~G~~~~~t~ 603 (673)
. ++.+++|.+.. ... ... ..+...+ ....+.+++. .++||.+.+.+ +...|+|+|+. |+
T Consensus 282 ~-~g~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~-~~~~P~l~~~~~~~~r~~~~i~~~w~G~r~~-t~ 357 (405)
T 3c4n_A 282 N-GGYTLVPAIHHRDPHGYHPAGGSLTGVPTGLR-RELLEDLVGL-MDAVPALAGEGLELGRSSADVPGAWLALPGG-RP 357 (405)
T ss_dssp T-TEEEEECCCCSCBCSSCCCCCCCBTTBCCSSC-HHHHHHHHHH-TTTCGGGGSSCBCCCSSGGGSCEEEEEEGGG-CT
T ss_pred C-CCeEEEeccccccccCcCcccccccccccCCC-HHHHHHHHHH-HHhCCCccccCccccccccceeeEEEeecCc-CC
Confidence 6 56777776532 111 110 0111222 2333566554 38999988765 78899999996 99
Q ss_pred CCCceeecCCCCCcEEEEEccCCccccchhHHHHHHHHHHHcCC
Q psy10285 604 DENAIIGLHPSYHNIHFATGFSGHGIQQAPAIGRAVSELILDAE 647 (673)
Q Consensus 604 d~~Piig~~~~~~~l~~~~G~~g~G~~~ap~~g~~va~~i~~~~ 647 (673)
|+.|+||++| +|+|+++||+|+ ++++|++|+.+|++|.++.
T Consensus 358 D~~P~ig~~~--~gl~~a~G~~g~-~~~ap~~a~~la~~i~~~~ 398 (405)
T 3c4n_A 358 DAPPQAEELA--PGLHLLLGGPLA-DTLGLAAAHELAQRVSASL 398 (405)
T ss_dssp TCCCEEEEEE--TTEEEEECCTTH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEecccC--CCeEEEEccCcH-HHHHHHHHHHHHHHHhCch
Confidence 9999999987 899999999886 5999999999999999765
No 16
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.96 E-value=8.2e-29 Score=265.28 Aligned_cols=319 Identities=17% Similarity=0.147 Sum_probs=217.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccC---cchhhHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFS---LRENIEMSLFGAE 319 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~---~~~~~~~~~~~~~ 319 (673)
..+||+|||+|++|+++|++|+ +.|.+|+|+|+.... .......++..+.|.+..... ......+...+.+
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La---~~G~~V~vle~~~~~---~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 78 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILA---RKGYSVHILARDLPE---DVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFK 78 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHH---HTTCEEEEEESSCTT---CTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHH---hCCCEEEEEeccCCC---CcCCcCcccCcccccccCcccCCCchHHHHHHHHHHH
Confidence 4579999999999999999999 789999999998761 000011133344455544322 2334455556666
Q ss_pred HHHHHHhhccccCCCCCCcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEecc
Q psy10285 320 FLRNIKHHCHVIGEDEPDVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGL 398 (673)
Q Consensus 320 ~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~~~ 398 (673)
.|.++... ...+...+.+.+. .+.. . ..+++++.+.+++.++.+++ | ....+.+ .
T Consensus 79 ~~~~~~~~---------~~g~~~~~~~~~~~~~~~--~---~~~~~~~~g~~~~~l~~~~~----p-----~~~~g~~-~ 134 (363)
T 1c0p_A 79 KWVELVPT---------GHAMWLKGTRRFAQNEDG--L---LGHWYKDITPNYRPLPSSEC----P-----PGAIGVT-Y 134 (363)
T ss_dssp HHHHHTTT---------TSSEEEEEEEEEESSGGG--G---GGGTTTTTSTTCEECCGGGS----S-----TTCEEEE-E
T ss_pred HHHHhCcc---------cCCeEEECCEEEEecCcc--c---hhHHHHHhCCCcEECCHHHC----C-----CceEEEE-E
Confidence 66665221 0112223444444 2211 1 12233455677788887654 3 1223555 3
Q ss_pred CCceeeCHHHHHHHHHHHHHHcCCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCC
Q psy10285 399 EKEGWFDPWLYLNAVKKKAISLGAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAG 478 (673)
Q Consensus 399 ~~~g~i~~~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG 478 (673)
.+++++|..++..|.+.+++.|+++++++|++|.. . . + +||.||+|+|
T Consensus 135 -~~~~v~p~~~~~~l~~~~~~~G~~i~~~~v~~l~~--------------------~--------~--~-~a~~VV~A~G 182 (363)
T 1c0p_A 135 -DTLSVHAPKYCQYLARELQKLGATFERRTVTSLEQ--------------------A--------F--D-GADLVVNATG 182 (363)
T ss_dssp -EEEECCHHHHHHHHHHHHHHTTCEEEECCCSBGGG--------------------T--------C--S-SCSEEEECCG
T ss_pred -ecceecHHHHHHHHHHHHHHCCCEEEEEEcccHhh--------------------c--------C--c-CCCEEEECCC
Confidence 67899999999999999999999998777766531 1 0 2 7999999999
Q ss_pred CCcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcCCCceEEEecCCceEEecCCCCCCCCC
Q psy10285 479 AYSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDTTGTYFRREGLGNYYICGKSPTPEQEP 558 (673)
Q Consensus 479 ~~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~i~G~~~~~~~~~ 558 (673)
.|+..++.. ..+|+.|.|+|++.++.+. +....+++.+....|++|.. ++.+++|.+.+....
T Consensus 183 ~~s~~l~~~--------------~~~~~~p~rg~~~~~~~~~-~~~~~~~~~~~~~~y~~p~~-~g~~~iG~t~~~~~~- 245 (363)
T 1c0p_A 183 LGAKSIAGI--------------DDQAAEPIRGQTVLVKSPC-KRCTMDSSDPASPAYIIPRP-GGEVICGGTYGVGDW- 245 (363)
T ss_dssp GGGGTSBTT--------------CCTTEEEEEEEEEEEECCC-CCCEEECSCTTCCEEEEEET-TTEEEEECCCEETCC-
T ss_pred cchhhccCc--------------ccCCccccCCeEEEEeCCc-ccceEeeccCCCcEEEEEcC-CCEEEEEeeeccCCC-
Confidence 999877542 2468999999999888653 21111111132458999996 566766665543221
Q ss_pred CCCCCCCChhHHHHhHHHHHhhhcccc------ccccccceeeeeccCCCCCCCceeecC--------------------
Q psy10285 559 PVDNLDVDYEYFNENVWPHLAHRVKAF------EELKVSNAWAGYYDFNYFDENAIIGLH-------------------- 612 (673)
Q Consensus 559 ~~~~~~~~~~~~~~~l~~~~~~~~P~l------~~~~i~~~w~G~~~~~t~d~~Piig~~-------------------- 612 (673)
+...+.+.+ +.+++.+.++||.+ .+.++...|+|+||. |+|+.|++++.
T Consensus 246 ---~~~~~~~~~-~~l~~~~~~~~P~l~~~~~~~~~~i~~~w~G~rp~-t~d~~piig~~~~~~~~~~~~~~d~~~~~g~ 320 (363)
T 1c0p_A 246 ---DLSVNPETV-QRILKHCLRLDPTISSDGTIEGIEVLRHNVGLRPA-RRGGPRVEAERIVLPLDRTKSPLSLGRGSAR 320 (363)
T ss_dssp ---CCSCCHHHH-HHHHHHHHHHCGGGSSSSSGGGCEEEEEEEEEEEE-ETTSCEEEEEEEEESCCTTTCTTCSSCTTCC
T ss_pred ---CCCCCHHHH-HHHHHHHHHhCccccCCcccccceEeeceEEECCC-CCCCceeEEEecccccccccCcccccccccc
Confidence 122334444 88999999999998 557889999999996 99999998873
Q ss_pred -CCC--CcEEEEEccCCccccchhHHHHHHHHHHHc
Q psy10285 613 -PSY--HNIHFATGFSGHGIQQAPAIGRAVSELILD 645 (673)
Q Consensus 613 -~~~--~~l~~~~G~~g~G~~~ap~~g~~va~~i~~ 645 (673)
|.. +|+|+++||+|+||+++|++|+.+|++|.+
T Consensus 321 ~p~~~~~~~~~a~G~~g~G~~~a~~~g~~~a~li~~ 356 (363)
T 1c0p_A 321 AAKEKEVTLVHAYGFSSAGYQQSWGAAEDVAQLVDE 356 (363)
T ss_dssp CSCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccceEEEecCCCCcchheeccHHHHHHHHHHH
Confidence 334 799999999999999999999999999985
No 17
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.94 E-value=1.1e-23 Score=238.27 Aligned_cols=346 Identities=17% Similarity=0.189 Sum_probs=231.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCc--chhhHHHHHHHHHH
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSL--RENIEMSLFGAEFL 321 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~--~~~~~~~~~~~~~~ 321 (673)
.+||+|||||++|+++|+.|+ +.|.+|+|+|+... +.++|..+.|.++..... .....+...+...+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La---~rG~~V~LlE~~~~--------~~GtS~~s~gli~~g~ryl~~~~~~l~~~~~~e~ 100 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAA---ASGIKTGLIEMQDF--------AEGTSSRSTKLVHGGIRYLKTFDVEVVADTVGER 100 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHH---HTTCCEEEECSSST--------TCSGGGSSCSEECCCGGGGGGTCHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHH---HCCCcEEEEeCCCC--------CCCcccccccccccccchhhccChHHHHHHHHHH
Confidence 479999999999999999999 88999999999876 456666676665532211 11122223332222
Q ss_pred HHHHhhccccCCCCCCcceeecCeEEEe-ccc--------hHHHHHHHHHHHH---HcCCcceeeCHhhHHhhCCCCCcc
Q psy10285 322 RNIKHHCHVIGEDEPDVNFTPNGYLFCA-SQD--------GAATLEKNHQLQK---ELGAKNVLLGPEQLKAKFPWLNTD 389 (673)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~--------~~~~l~~~~~~~~---~~g~~~~~l~~~~~~~~~p~~~~~ 389 (673)
..+..... .+ ..+.+.+... ... ........++.+. ..+...++++++++.+.+|.+..+
T Consensus 101 ~~l~~~~~-------~~-~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~e~~~~~P~l~~~ 172 (571)
T 2rgh_A 101 AVVQGIAP-------HI-PKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPFLKKE 172 (571)
T ss_dssp HHHHHHCT-------TS-SEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTTSCCT
T ss_pred HHHHHhCc-------cc-ccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCCCcEEECHHHHHHhCcCCchh
Confidence 22221111 11 1233444322 211 1111122233332 245578899999999999988776
Q ss_pred cceeEEeccCCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcC-CCCeeE
Q psy10285 390 DIALACLGLEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDE-KGELKT 467 (673)
Q Consensus 390 ~~~~g~~~~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~-~G~~~~ 467 (673)
.+..+++ .+ .+++++.+++..+.+.+++.|++|++ ++|++|..++ ++|.++.+... +|+..+
T Consensus 173 ~~~gg~~-~~-dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--------------~~v~gV~~~d~~tg~~~~ 236 (571)
T 2rgh_A 173 GLKGAGV-YL-DFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG--------------DQIVGVKARDLLTDEVIE 236 (571)
T ss_dssp TEEEEEE-EC-CEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--------------TEEEEEEEEETTTCCEEE
T ss_pred hceEEEE-ec-CCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC--------------CEEEEEEEEEcCCCCEEE
Confidence 5665665 34 47899999999999999999999995 5999999876 46667555532 343347
Q ss_pred EecCEEEEcCCCCcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcC-----CCceEEEecC
Q psy10285 468 ITFAICVIAAGAYSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDT-----TGTYFRREGL 542 (673)
Q Consensus 468 i~ad~VVlAtG~~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~y~~~~~~ 542 (673)
++||.||+|+|+|+..++++.+... ...++.|.||+.+.++.+..+ ...+++++. ..+|+.|..
T Consensus 237 i~A~~VV~AaG~ws~~l~~~~g~~~---------~~~~i~p~rG~~l~~~~~~~~-~~~~~~~~~~~~dgr~~~~~P~~- 305 (571)
T 2rgh_A 237 IKAKLVINTSGPWVDKVRNLNFTRP---------VSPKMRPTKGIHLVVDAKKLP-VPQPTYFDTGKQDGRMVFAIPRE- 305 (571)
T ss_dssp EEBSCEEECCGGGHHHHHTTCCSSC---------CCCCBCCEEEEEEEEEGGGSC-CSSCEEEECSSSSSCEEEEEEET-
T ss_pred EEcCEEEECCChhHHHHHHhhccCc---------cCceeeccceEEEEeccccCC-CCcEEEEeccCCCCcEEEEEEcC-
Confidence 9999999999999999988665421 015689999999988753222 234555532 246899984
Q ss_pred CceEEecCCCCCC-CCCCCCCCCCChhHHHHhHHHHHhhhccc--cccccccceeeeeccCCCCCCC---------ceee
Q psy10285 543 GNYYICGKSPTPE-QEPPVDNLDVDYEYFNENVWPHLAHRVKA--FEELKVSNAWAGYYDFNYFDEN---------AIIG 610 (673)
Q Consensus 543 ~g~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~P~--l~~~~i~~~w~G~~~~~t~d~~---------Piig 610 (673)
+.+++|++.... ..+ .+..++.+++ +.+++.+.++||. +....+...|+|+||. ++|+. |+|+
T Consensus 306 -~~~~iG~t~~~~~~~~--~~~~~~~~~~-~~ll~~~~~~~P~~~l~~~~v~~~waG~Rp~-~~d~~~~~~~~~r~~~i~ 380 (571)
T 2rgh_A 306 -NKTYFGTTDTDYQGDF--TDPKVTQEDV-DYLLDVINHRYPEANITLADIEASWAGLRPL-LIGNSGSPSTISRGSSLE 380 (571)
T ss_dssp -TEEEECCCCEECCSCS--SSCCCCHHHH-HHHHHHHHHHSTTTCCCGGGCCEEEEEEECC-BCC-----------EEEE
T ss_pred -CeEEEcCCCcCCCCCc--CCCCCCHHHH-HHHHHHHHHhcCccCCchhceeEEeEEeeec-cCCCCCCcccCCCCcEEe
Confidence 456677665421 111 1223344555 8899999999997 4677889999999996 77643 6777
Q ss_pred cCCCCCcEEEEEccCCccccchhHHHHHHHHHHHc
Q psy10285 611 LHPSYHNIHFATGFSGHGIQQAPAIGRAVSELILD 645 (673)
Q Consensus 611 ~~~~~~~l~~~~G~~g~G~~~ap~~g~~va~~i~~ 645 (673)
.. .+|++.++|.. ++.++.+|+.+++++.+
T Consensus 381 ~~--~~gl~~v~GGk---~Tt~r~~Ae~~~~~i~~ 410 (571)
T 2rgh_A 381 RE--PDGLLTLSGGK---ITDYRKMAEGALRLIRQ 410 (571)
T ss_dssp EC--TTSCEEEEECC---GGGHHHHHHHHHHHHHH
T ss_pred cC--CCCeEEEeCcc---hhhHHHHHHHHHHHHHH
Confidence 53 47898776643 99999999999998854
No 18
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.93 E-value=4e-24 Score=238.74 Aligned_cols=345 Identities=13% Similarity=0.086 Sum_probs=228.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCc--chhhHHHHHHHHHH
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSL--RENIEMSLFGAEFL 321 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~--~~~~~~~~~~~~~~ 321 (673)
.+||+|||||++|+++|+.|+ +.|.+|+|+|+... +.++|..+.|.++..... .....+...+...+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La---~~G~~V~llE~~~~--------~~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~ 71 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAA---GRGLSVLMLEAQDL--------ACATSSASSKLIHGGLRYLEHYEFRLVSEALAER 71 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHH---HTTCCEEEECSSST--------TCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHH---hCCCCEEEEECCCC--------CCCccccccccccccchhhhhchHHHHHHHHHHH
Confidence 479999999999999999999 88999999999876 456667777766543221 12234444454444
Q ss_pred HHHHhhccccCCCCCCcceeecCeEEEeccc--hHHHHHHHHHHHHHcCCcceeeCHhhHHhhC--CCCCcccceeEEec
Q psy10285 322 RNIKHHCHVIGEDEPDVNFTPNGYLFCASQD--GAATLEKNHQLQKELGAKNVLLGPEQLKAKF--PWLNTDDIALACLG 397 (673)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~--p~~~~~~~~~g~~~ 397 (673)
..+.+... .+ ....+.+...... ...............+ ..++++++++.+.+ |.+... +..+.+
T Consensus 72 ~~l~~~~~-------~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~P~l~~~-~~~~~~- 140 (501)
T 2qcu_A 72 EVLLKMAP-------HI-AFPMRFRLPHRPHLRPAWMIRIGLFMYDHLG-KRTSLPGSTGLRFGANSVLKPE-IKRGFE- 140 (501)
T ss_dssp HHHHHHCT-------TT-EEEEEEEEECCTTTSCHHHHHHHHHHHHSSS-CCSSSCCCEEEECCTTSSBCTT-CCEEEE-
T ss_pred HHHHHhCC-------cc-ccccCeEeccCcccchHHHHHHHHHHHHhcC-CcEEECHHHHHHhhcCCCcchh-ceEEEE-
Confidence 44432211 11 2222322222211 1111122222222223 46677777766666 776543 444444
Q ss_pred cCCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEc-CCCCeeEEecCEEEE
Q psy10285 398 LEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRD-EKGELKTITFAICVI 475 (673)
Q Consensus 398 ~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t-~~G~~~~i~ad~VVl 475 (673)
. .+++++|.+++..|.+.+++.|+++++ ++|+++..+++ +.++.+.. .+|+..+++||.||+
T Consensus 141 ~-~~g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~---------------~~~V~~~d~~~G~~~~i~A~~VV~ 204 (501)
T 2qcu_A 141 Y-SDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG---------------LWIVEAEDIDTGKKYSWQARGLVN 204 (501)
T ss_dssp E-EEEEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT---------------EEEEEEEETTTCCEEEEEESCEEE
T ss_pred e-eCCEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCC---------------EEEEEEEECCCCCEEEEECCEEEE
Confidence 3 578899999999999999999999995 59999987652 33433322 456445799999999
Q ss_pred cCCCCcHHHHHH-cCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEc---CCCceEEEecCCceEEecCC
Q psy10285 476 AAGAYSGQVARM-LKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVID---TTGTYFRREGLGNYYICGKS 551 (673)
Q Consensus 476 AtG~~s~~l~~~-~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~y~~~~~~~g~~i~G~~ 551 (673)
|+|.|+..+++. ++.. ...++.|.||+.+.++.+ .+ ...++++. ...+|+.|.. ++.+++|.+
T Consensus 205 AtG~~s~~l~~~~l~~~----------~~~~i~p~rG~~~~~~~~-~~-~~~~~~~~~~dg~~~~~~P~~-~g~~~iG~t 271 (501)
T 2qcu_A 205 ATGPWVKQFFDDGMHLP----------SPYGIRLIKGSHIVVPRV-HT-QKQAYILQNEDKRIVFVIPWM-DEFSIIGTT 271 (501)
T ss_dssp CCGGGHHHHHHHHTCCC----------CSSCBCCEEEEEEEEECS-SS-CSCEEEEECTTSCEEEEEEET-TTEEEEECC
T ss_pred CCChhHHHHHHHhccCC----------cccccccceeEEEEECCC-CC-CceEEEeecCCCCEEEEEEcC-CCcEEEcCC
Confidence 999999999875 4421 135789999999888743 22 13344442 2347899985 466777776
Q ss_pred CCCCC-CCCCCCCCCChhHHHHhHHHHHhhhcc-ccccccccceeeeeccCCCCCCCceeecCCC-----------CCcE
Q psy10285 552 PTPEQ-EPPVDNLDVDYEYFNENVWPHLAHRVK-AFEELKVSNAWAGYYDFNYFDENAIIGLHPS-----------YHNI 618 (673)
Q Consensus 552 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~P-~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~-----------~~~l 618 (673)
..... .+ .+..++.+.+ +.+++.+.++|| .+....+...|+|+||. ++|+.|+++.++. .+++
T Consensus 272 ~~~~~~~~--~~~~~~~~~~-~~l~~~~~~~~p~~l~~~~v~~~~aG~Rp~-~~d~~p~~~~~~~~~~i~~~~~~~~~gl 347 (501)
T 2qcu_A 272 DVEYKGDP--KAVKIEESEI-NYLLNVYNTHFKKQLSRDDIVWTYSGVRPL-CDDESDSPQAITRDYTLDIHDENGKAPL 347 (501)
T ss_dssp CEECCSCG--GGCCCCHHHH-HHHHHHHHHHBSSCCCGGGCCEEEEEEECC-BCCCCSSGGGSCCCCEEEEEEETTEEEE
T ss_pred CCCCCCCc--CCCCCCHHHH-HHHHHHHHHhcCCCCCcccEEEEEEEEeee-cCCCCCccccCcCceEEEecccCCCCCe
Confidence 54321 11 1223344554 889999999999 78888999999999996 9999998887652 1234
Q ss_pred EEEEccCCccccchhHHHHHHHHHHHcC
Q psy10285 619 HFATGFSGHGIQQAPAIGRAVSELILDA 646 (673)
Q Consensus 619 ~~~~G~~g~G~~~ap~~g~~va~~i~~~ 646 (673)
+.++|. |++.++.+|+.+++++.+.
T Consensus 348 ~~i~Gg---~~t~~~~~Ae~~~~~~~~~ 372 (501)
T 2qcu_A 348 LSVFGG---KLTTYRKLAEHALEKLTPY 372 (501)
T ss_dssp EEEECC---CGGGHHHHHHHHHHHHGGG
T ss_pred EEEeCc---cccchHHHHHHHHHHHHHh
Confidence 444433 7999999999999999864
No 19
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.91 E-value=8.3e-23 Score=230.68 Aligned_cols=350 Identities=15% Similarity=0.115 Sum_probs=216.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCc--chhhHHHHHHH--
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSL--RENIEMSLFGA-- 318 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~--~~~~~~~~~~~-- 318 (673)
..+||+|||||++|+.+|+.|+ ..|.+|+|+|+... +.+++..+.+.++..+.. .....+.....
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La---~~G~~V~LlEk~d~--------~~GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e 85 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQ---VRGIQTGLVEMNDF--------ASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKE 85 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHH---TTTCCEEEEESSST--------TCSGGGSSCCEECC---------------CHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHH---hCCCcEEEEECCCC--------CCCcccCCcCccccchHHHHhcCHHHHHHHHHH
Confidence 4589999999999999999999 89999999999976 445555555444321111 00011111111
Q ss_pred -HHHHHHHhhccccCCCCCCcceeecCeEEEe-ccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEe
Q psy10285 319 -EFLRNIKHHCHVIGEDEPDVNFTPNGYLFCA-SQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACL 396 (673)
Q Consensus 319 -~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~ 396 (673)
..+.....++. ......+.+...+.+... ..... .+....... ......++++.+++.+.+|.+....+..+.+
T Consensus 86 ~~~l~~~ap~l~--~~~~~~~p~~~~~~~~~~~~~~g~-~~~d~l~~~-~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~ 161 (561)
T 3da1_A 86 RAIVYENAPHVT--TPEWMLLPIFKDGTFGKFSTSLGL-KVYDYLADV-RKDERRYMLNEKQTLEKEPLLRKENLKGGGI 161 (561)
T ss_dssp HHHHHHHCTTTC--EEEEEEEEECC-----------------------------CEEECHHHHHHHCTTSCCTTCCEEEE
T ss_pred HHHHHHhCchhc--cccceeEeecCCccHHHHHHHhHH-HHHHHhhcc-cCCCCcEEECHHHHHHhCccCChhhceeEEE
Confidence 11111111000 000000001111111111 00000 011111111 1234578899999999999887665555665
Q ss_pred ccCCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEc-CCCCeeEEecCEEE
Q psy10285 397 GLEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRD-EKGELKTITFAICV 474 (673)
Q Consensus 397 ~~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t-~~G~~~~i~ad~VV 474 (673)
. + .+++++.+++..|.+.+++.|+++++ ++|++|..++ +++.++.+.. .+|+..+++||.||
T Consensus 162 ~-~-dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~--------------g~v~gV~~~d~~tg~~~~i~A~~VV 225 (561)
T 3da1_A 162 Y-V-EYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQ--------------GKVVGVVAKDRLTDTTHTIYAKKVV 225 (561)
T ss_dssp E-E-EEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET--------------TEEEEEEEEETTTCCEEEEEEEEEE
T ss_pred e-c-CceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC--------------CeEEEEEEEEcCCCceEEEECCEEE
Confidence 3 3 56999999999999999999999996 5999999876 5666755553 24544689999999
Q ss_pred EcCCCCcHHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEc----CCCceEEEecCCceEEecC
Q psy10285 475 IAAGAYSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVID----TTGTYFRREGLGNYYICGK 550 (673)
Q Consensus 475 lAtG~~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~y~~~~~~~g~~i~G~ 550 (673)
+|+|.|+..++++++.. ...++.|.||+.+.++.+..+. ..++++. ...+|+.|. ++.+++|.
T Consensus 226 ~AaG~~s~~l~~~~g~~----------~~~~v~p~kG~~lvl~~~~~~~-~~~~~~~~~~dgr~v~~iP~--~g~~~iGt 292 (561)
T 3da1_A 226 NAAGPWVDTLREKDRSK----------HGKYLKLSKGVHLVVDQSRFPL-RQAVYFDTESDGRMIFAIPR--EGKTYIGT 292 (561)
T ss_dssp ECCGGGHHHHHHTTTCC----------CSSEEEEEEEEEEEEEGGGSCC-SSEEEECCSSSCCCEEEEEE--TTEEEECC
T ss_pred ECCCcchHHHHHhcCCC----------CCceEEeccEEEEEECCccCCC-ceEEEeccCCCCcEEEEEec--CCCEEEcC
Confidence 99999999999987753 2357899999988887543322 3445442 224688999 35677777
Q ss_pred CCCCC-CCCCCCCCCCChhHHHHhHHHHHhhhccccc--cccccceeeeeccCCCCC---------CCceeecCCCCCcE
Q psy10285 551 SPTPE-QEPPVDNLDVDYEYFNENVWPHLAHRVKAFE--ELKVSNAWAGYYDFNYFD---------ENAIIGLHPSYHNI 618 (673)
Q Consensus 551 ~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~--~~~i~~~w~G~~~~~t~d---------~~Piig~~~~~~~l 618 (673)
+.... ..+ .+..++.+++ +.+++.+.++||.+. ...+...|+|+||. +.| +..+|... .+|+
T Consensus 293 T~~~~~~~~--~~~~~t~~~i-~~ll~~~~~~~P~l~~~~~~v~~~~aGlRPl-~~~~~~~~~~~sR~~~i~~~--~~gl 366 (561)
T 3da1_A 293 TDTFYDKDI--ASPRMTVEDR-DYILAAANYMFPSLRLTADDVESSWAGLRPL-IHEEGKKASEISRKDEIFFS--DSGL 366 (561)
T ss_dssp CCEEECSCT--TCCCCCHHHH-HHHHHHHHHHCTTCCCCTTTEEEEEEEEEEE-EEC-----------CCEEEC--SSCC
T ss_pred CCCccCCCc--CCCCCCHHHH-HHHHHHHHHhCCCCCCChhhEEEEeEEeccc-cCCCCCCccccccceEEEec--CCCe
Confidence 66431 111 1233445565 889999999999876 77889999999996 433 12333333 3678
Q ss_pred EEEEccCCccccchhHHHHHHHHHHHc
Q psy10285 619 HFATGFSGHGIQQAPAIGRAVSELILD 645 (673)
Q Consensus 619 ~~~~G~~g~G~~~ap~~g~~va~~i~~ 645 (673)
+.++|.- ++.++.+|+.+++++..
T Consensus 367 i~i~Ggk---~Tt~r~mAe~~~d~~~~ 390 (561)
T 3da1_A 367 ISIAGGK---LTGYRKMAERTVDAVAQ 390 (561)
T ss_dssp EEECCCC---STTHHHHHHHHHHHHHH
T ss_pred EEEeCCh---hhhHHHHHHHHHHHHHH
Confidence 7777664 99999999999998853
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.41 E-value=1.1e-11 Score=133.39 Aligned_cols=204 Identities=11% Similarity=0.045 Sum_probs=115.9
Q ss_pred ceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCC
Q psy10285 401 EGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGA 479 (673)
Q Consensus 401 ~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~ 479 (673)
...++...+...|.+.+++.|++++. ++|++++.++ +++.++.+.+.+ ...+++||.||.|+|.
T Consensus 96 ~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--------------~~v~gv~~~~~~-~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 96 GYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--------------GKVAGAKIRHNN-EIVDVRAKMVIAADGF 160 (397)
T ss_dssp EEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--------------TEEEEEEEEETT-EEEEEEEEEEEECCCT
T ss_pred eEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC--------------CEEEEEEEEECC-eEEEEEcCEEEECCCc
Confidence 44678889999999999999999995 5999998876 456665444322 2258999999999999
Q ss_pred CcHHHHHHcCCCC-CcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEc---C-CCceEEEecCCceEEecCCCCC
Q psy10285 480 YSGQVARMLKIGD-KNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVID---T-TGTYFRREGLGNYYICGKSPTP 554 (673)
Q Consensus 480 ~s~~l~~~~g~~~-~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~---~-~~~y~~~~~~~g~~i~G~~~~~ 554 (673)
++ .+.+.+++.. +. -+.....+..+.+.....+.....+.+. + ...|+.|..+ +.+.+|.....
T Consensus 161 ~s-~~~~~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~vg~~~~~ 229 (397)
T 3cgv_A 161 ES-EFGRWAGLKSVIL---------ARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGE-GMANVGIGSSI 229 (397)
T ss_dssp TC-HHHHHHTCCTTCC---------CGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEET-TEEEEEEEEET
T ss_pred ch-HhHHhcCCCccCC---------ChhheeEEEEEEeccCCCCCCcEEEEeCCcCCCceEEEEECCC-CeEEEEEEecc
Confidence 98 6777777543 11 0111112222222221111101112221 2 3467888864 44433322111
Q ss_pred CCCCCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCceeecCCCCCcEEE-------EEccCCc
Q psy10285 555 EQEPPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIHF-------ATGFSGH 627 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~~-------~~G~~g~ 627 (673)
... . ..... ++.++.+.+.+|.+...++...|.+.+|. +.....+. .+|+++ ...+.|.
T Consensus 230 ~~~---~----~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~-----~~~v~liGDAa~~~~P~~G~ 295 (397)
T 3cgv_A 230 NWI---H----NRFEL-KNYLDRFIENHPGLKKGQDIQLVTGGVSV-SKVKMPIT-----MPGLMLVGDAARLIDPITGG 295 (397)
T ss_dssp TTC---S----CHHHH-HHHHHHHHHTCHHHHTSEEEEEEEEEEEC-CCCCSCCE-----ETTEEECGGGGTCSCTTTCC
T ss_pred ccc---c----CCCCH-HHHHHHHHHhCcCCCCCeEEeeeeeeeec-CCCcccee-----eCCEEEEEccccCCCCCCCC
Confidence 110 0 01222 44445555556666667777888887764 21111111 133333 2347889
Q ss_pred cccchhHHHHHHHHHHH
Q psy10285 628 GIQQAPAIGRAVSELIL 644 (673)
Q Consensus 628 G~~~ap~~g~~va~~i~ 644 (673)
|+.+|...|..+++.+.
T Consensus 296 G~~~a~~~a~~la~~l~ 312 (397)
T 3cgv_A 296 GIANAIVSGMYAAQVTK 312 (397)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999998888887775
No 21
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.38 E-value=9.4e-12 Score=133.74 Aligned_cols=61 Identities=18% Similarity=0.214 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCeEEEe-ceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHH-HHHHc
Q psy10285 411 NAVKKKAISLGAEYVRG-EVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQ-VARML 488 (673)
Q Consensus 411 ~~l~~~~~~~Gv~i~~~-~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~-l~~~~ 488 (673)
..+.+.+++.|++++.+ +|+++..+++ ++.|.+.+| .++.+|.||+|+|..... +++.+
T Consensus 191 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~-----------------~~~v~~~~g--~~i~~d~vv~a~G~~p~~~l~~~~ 251 (384)
T 2v3a_A 191 KAVQAGLEGLGVRFHLGPVLASLKKAGE-----------------GLEAHLSDG--EVIPCDLVVSAVGLRPRTELAFAA 251 (384)
T ss_dssp HHHHHHHHTTTCEEEESCCEEEEEEETT-----------------EEEEEETTS--CEEEESEEEECSCEEECCHHHHHT
T ss_pred HHHHHHHHHcCCEEEeCCEEEEEEecCC-----------------EEEEEECCC--CEEECCEEEECcCCCcCHHHHHHC
Confidence 34556667789999964 8999987653 456777788 489999999999977653 66665
Q ss_pred CC
Q psy10285 489 KI 490 (673)
Q Consensus 489 g~ 490 (673)
|+
T Consensus 252 g~ 253 (384)
T 2v3a_A 252 GL 253 (384)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 22
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.34 E-value=1e-10 Score=127.05 Aligned_cols=62 Identities=13% Similarity=0.096 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcH-HHHHHc
Q psy10285 411 NAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSG-QVARML 488 (673)
Q Consensus 411 ~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~-~l~~~~ 488 (673)
..+.+.+++.|++++. ++|+++..++ +++.+ |++.+|+ ++.||.||+|+|.... .+++.+
T Consensus 198 ~~l~~~l~~~GV~i~~~~~v~~i~~~~--------------~~v~~--v~l~dG~--~i~aD~Vv~a~G~~p~~~l~~~~ 259 (415)
T 3lxd_A 198 EFYQAEHRAHGVDLRTGAAMDCIEGDG--------------TKVTG--VRMQDGS--VIPADIVIVGIGIVPCVGALISA 259 (415)
T ss_dssp HHHHHHHHHTTCEEEETCCEEEEEESS--------------SBEEE--EEESSSC--EEECSEEEECSCCEESCHHHHHT
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEecC--------------CcEEE--EEeCCCC--EEEcCEEEECCCCccChHHHHhC
Confidence 3355667788999995 5899998765 34555 7778884 8999999999997755 366665
Q ss_pred CC
Q psy10285 489 KI 490 (673)
Q Consensus 489 g~ 490 (673)
++
T Consensus 260 gl 261 (415)
T 3lxd_A 260 GA 261 (415)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 23
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.34 E-value=8.8e-12 Score=139.71 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=34.2
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 242 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 242 ~~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+++|+|||+|.+|+++|..|+ +.+.+|++++|.+.
T Consensus 176 ~~~krV~VIG~G~sgve~a~~l~---~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 176 LAGRRVGVIGTGSTGQQVITSLA---PEVEHLTVFVRTPQ 212 (540)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHT---TTCSEEEEEESSCC
T ss_pred cccceEEEECCCchHHHHHHHHH---hhCCEEEEEECCCC
Confidence 46789999999999999999999 88999999999876
No 24
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.33 E-value=2.3e-12 Score=143.26 Aligned_cols=36 Identities=31% Similarity=0.414 Sum_probs=31.6
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
+++|||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~---G~~V~liEk~~ 58 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQL---GMKVAVVEKRS 58 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT---TCCEEEEESSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHC---CCeEEEEecCC
Confidence 3469999999999999999999999 99999999864
No 25
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.33 E-value=1.1e-12 Score=146.56 Aligned_cols=34 Identities=32% Similarity=0.400 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.||+||||||++|+++|..++++ |+||+|||++.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~---G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAH---GARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT---TCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC---CCeEEEEeccc
Confidence 39999999999999999999999 99999999754
No 26
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.32 E-value=4.7e-12 Score=140.41 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=32.9
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+|||+|||||++|+++|+.|+++ |++|+|||++..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~---G~~V~liEk~~~ 60 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL---GKRVAIAEEYRI 60 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhC---cCEEEEEeCCCC
Confidence 59999999999999999999999 999999999654
No 27
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.32 E-value=1.5e-11 Score=137.57 Aligned_cols=66 Identities=20% Similarity=0.270 Sum_probs=49.3
Q ss_pred HHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHH--HHHHc
Q psy10285 412 AVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQ--VARML 488 (673)
Q Consensus 412 ~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~--l~~~~ 488 (673)
.+.+.+++.|++++. ++|+++..+++ +++.++.|.+.+|+ .++.||.||+|+|..... ++..+
T Consensus 260 ~l~~~l~~~GV~i~~~~~V~~i~~~~~-------------~~v~~~~v~~~~G~-~~i~aD~Vv~A~G~~p~~~~~l~~~ 325 (523)
T 1mo9_A 260 YVLDRMKEQGMEIISGSNVTRIEEDAN-------------GRVQAVVAMTPNGE-MRIETDFVFLGLGEQPRSAELAKIL 325 (523)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEECTT-------------SBEEEEEEEETTEE-EEEECSCEEECCCCEECCHHHHHHH
T ss_pred HHHHHHHhCCcEEEECCEEEEEEEcCC-------------CceEEEEEEECCCc-EEEEcCEEEECcCCccCCccCHHHc
Confidence 356667788999995 59999987654 44555678888872 279999999999987665 66766
Q ss_pred CCC
Q psy10285 489 KIG 491 (673)
Q Consensus 489 g~~ 491 (673)
|+.
T Consensus 326 gl~ 328 (523)
T 1mo9_A 326 GLD 328 (523)
T ss_dssp TCC
T ss_pred CCc
Confidence 653
No 28
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.32 E-value=1.7e-11 Score=137.49 Aligned_cols=37 Identities=24% Similarity=0.195 Sum_probs=34.1
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 242 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 242 ~~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+++|+|||+|.+|+++|..|+ ..+.+|++++|.+.
T Consensus 183 ~~~krV~VIG~G~tgve~a~~la---~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 183 FTGKRVGVIGTGATGVQIIPIAA---ETAKELYVFQRTPN 219 (545)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHT---TTBSEEEEEESSCC
T ss_pred cCCCeEEEECCCccHHHHHHHHH---hhCCEEEEEEcCCC
Confidence 46789999999999999999999 88999999999886
No 29
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.31 E-value=1.4e-11 Score=138.46 Aligned_cols=37 Identities=22% Similarity=0.189 Sum_probs=34.0
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 242 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 242 ~~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+++|+|||+|.+|+++|..|+ ..+.+|++++|.+.
T Consensus 189 ~~~krV~VIG~G~sgve~a~~l~---~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 189 FTGKRVGVIGTGSSGIQSIPIIA---EQAEQLFVFQRSAN 225 (549)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHH---HHBSEEEEEESSCC
T ss_pred cCCCEEEEECCCchHHHHHHHHH---hhCCEEEEEECCCC
Confidence 36789999999999999999999 77899999999886
No 30
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.30 E-value=1.5e-10 Score=125.30 Aligned_cols=62 Identities=13% Similarity=0.197 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcH-HHHHHc
Q psy10285 411 NAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSG-QVARML 488 (673)
Q Consensus 411 ~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~-~l~~~~ 488 (673)
..+.+.+++.|++++. ++|+++..++ +++.+ |++.+|+ ++.||.||+|+|.... .+++.+
T Consensus 188 ~~l~~~l~~~GV~i~~~~~v~~i~~~~--------------~~v~~--V~~~dG~--~i~aD~Vv~a~G~~p~~~l~~~~ 249 (404)
T 3fg2_P 188 SYFHDRHSGAGIRMHYGVRATEIAAEG--------------DRVTG--VVLSDGN--TLPCDLVVVGVGVIPNVEIAAAA 249 (404)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEET--------------TEEEE--EEETTSC--EEECSEEEECCCEEECCHHHHHT
T ss_pred HHHHHHHHhCCcEEEECCEEEEEEecC--------------CcEEE--EEeCCCC--EEEcCEEEECcCCccCHHHHHhC
Confidence 3456667788999995 4999998765 34445 7788884 8999999999997654 366666
Q ss_pred CC
Q psy10285 489 KI 490 (673)
Q Consensus 489 g~ 490 (673)
|+
T Consensus 250 gl 251 (404)
T 3fg2_P 250 GL 251 (404)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 31
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.29 E-value=2.3e-12 Score=134.25 Aligned_cols=40 Identities=23% Similarity=0.393 Sum_probs=35.3
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDL 142 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~ 142 (673)
+|||||||||+||+++|++|+++ |++|+|||++.....|+
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~---g~~V~liE~~~~gG~~~ 45 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRA---NLKTVMIERGIPGGQMA 45 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSCTTGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHC---CCCEEEEecCCCCCeee
Confidence 59999999999999999999999 99999999986533343
No 32
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.28 E-value=1e-11 Score=136.41 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=33.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+|||+|||||++|+++|+.|++. |++|+|||++..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~---g~~V~liE~~~~ 38 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY---GQKCALIEAKEL 38 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT---TCCEEEEESSCT
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC---CCeEEEEcCCCC
Confidence 358999999999999999999998 999999999854
No 33
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.27 E-value=2.9e-11 Score=131.29 Aligned_cols=75 Identities=16% Similarity=0.108 Sum_probs=59.8
Q ss_pred ceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCC
Q psy10285 401 EGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGA 479 (673)
Q Consensus 401 ~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~ 479 (673)
...+++..+...|.+.+++.|++++. ++|++++.+++ +. .+.+.+.+|+..+++||.||.|+|.
T Consensus 100 ~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-------------~~--~v~v~~~~g~~~~~~a~~vV~A~G~ 164 (421)
T 3nix_A 100 TWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGT-------------DS--VTTIEDINGNKREIEARFIIDASGY 164 (421)
T ss_dssp EEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETT-------------EE--EEEEEETTSCEEEEEEEEEEECCGG
T ss_pred eeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-------------EE--EEEEEcCCCCEEEEEcCEEEECCCC
Confidence 45688899999999999999999995 59999988764 11 2557778885557999999999999
Q ss_pred CcHHHHHHcCCC
Q psy10285 480 YSGQVARMLKIG 491 (673)
Q Consensus 480 ~s~~l~~~~g~~ 491 (673)
++ .+.+.+++.
T Consensus 165 ~s-~l~~~~g~~ 175 (421)
T 3nix_A 165 GR-VIPRMFGLD 175 (421)
T ss_dssp GC-HHHHHTTCE
T ss_pred ch-hhHHhcCCC
Confidence 88 666777654
No 34
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.26 E-value=2.8e-11 Score=133.33 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=32.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+|||+|||||++|+++|+.|+++ |++|+|||++..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~---G~~V~liEk~~~ 39 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAAL---GKKVAIAEEFRY 39 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT---TCCEEEEESSCT
T ss_pred CCcEEEECcCHHHHHHHHHHHhC---CCEEEEEeCCCC
Confidence 59999999999999999999999 999999999654
No 35
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.25 E-value=3.9e-11 Score=132.23 Aligned_cols=36 Identities=33% Similarity=0.512 Sum_probs=33.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+|||+|||||++|+++|+.|++. |++|+|||++..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~---g~~V~liE~~~~ 38 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF---GKRVALIESKAL 38 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSCT
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC---CCcEEEEcCCCC
Confidence 358999999999999999999998 999999999854
No 36
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.25 E-value=5e-11 Score=126.68 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=33.2
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
...+||+|||||++|+++|+.|++. |++|+|||+...
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~---g~~v~lie~~~~ 48 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMN---NISCRIIESMPQ 48 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC---CCCEEEEecCCC
Confidence 3458999999999999999999999 999999999753
No 37
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.25 E-value=2.9e-10 Score=118.48 Aligned_cols=39 Identities=31% Similarity=0.520 Sum_probs=33.8
Q ss_pred CCCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 96 LFPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 96 ~~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.|...+||+|||||++|+++|+.|++. |++|+|||+...
T Consensus 12 ~m~~~~dvvIIG~G~aGl~aA~~l~~~---g~~v~lie~~~~ 50 (319)
T 3cty_A 12 EKERDFDVVIVGAGAAGFSAAVYAARS---GFSVAILDKAVA 50 (319)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSST
T ss_pred cccCCCcEEEECcCHHHHHHHHHHHhC---CCcEEEEeCCCC
Confidence 345569999999999999999999999 999999999643
No 38
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.25 E-value=6.8e-11 Score=123.21 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=32.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
+.+||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~---g~~v~lie~~~ 38 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA---NLQPVLITGME 38 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT---TCCCEEECCSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC---CCcEEEEccCC
Confidence 458999999999999999999999 99999999764
No 39
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.25 E-value=1.1e-10 Score=129.11 Aligned_cols=36 Identities=39% Similarity=0.480 Sum_probs=33.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..|||+|||||++|+++|+.|++. |++|+|||++..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~---G~~V~liE~~~~ 54 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL---GARAAVVESHKL 54 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT---TCCEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC---CCeEEEEecCCC
Confidence 469999999999999999999999 999999998864
No 40
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.24 E-value=4.8e-11 Score=131.19 Aligned_cols=36 Identities=22% Similarity=0.378 Sum_probs=32.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~---~~g~~V~lv~~~~~ 201 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWH---RLGAEVIVLEYMDR 201 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHH---HTTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHH---HcCCEEEEEecCCc
Confidence 3578999999999999999999 88999999998776
No 41
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.24 E-value=1.5e-11 Score=136.08 Aligned_cols=35 Identities=23% Similarity=0.392 Sum_probs=33.0
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.+|||+|||||++|+++|+.|++. |++|+|||++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~---G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL---GLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH---TCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC---CCEEEEEeCCC
Confidence 359999999999999999999999 99999999986
No 42
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.24 E-value=1.3e-10 Score=121.76 Aligned_cols=37 Identities=16% Similarity=0.296 Sum_probs=32.9
Q ss_pred CCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 97 FPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 97 ~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.++.+||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~---g~~v~vie~~~ 55 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARA---EIKPILYEGMM 55 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHT---TCCCEEECCSS
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEecCC
Confidence 34569999999999999999999999 99999999964
No 43
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.23 E-value=2.1e-10 Score=124.64 Aligned_cols=211 Identities=10% Similarity=0.006 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcH-H
Q psy10285 406 PWLYLNAVKKKAISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSG-Q 483 (673)
Q Consensus 406 ~~~~~~~l~~~~~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~-~ 483 (673)
...+++.|.+.+++.|++|+ +++|++|..++ +++.+ |.++ | .+++||.||+|++.+.. .
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--------------~~~~g--v~~~-g--~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILIEN--------------GKAAG--IIAD-D--RIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--------------TEEEE--EEET-T--EEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEEEC--------------CEEEE--EEEC-C--EEEECCEEEECCCHHHHHH
Confidence 36789999999999999999 45999999876 44545 5555 5 38999999999998754 3
Q ss_pred HHHHcC-CCCCc-ccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcCCCc----eEEEe-------cCCceEEecC
Q psy10285 484 VARMLK-IGDKN-QEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDTTGT----YFRRE-------GLGNYYICGK 550 (673)
Q Consensus 484 l~~~~g-~~~~~-~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----y~~~~-------~~~g~~i~G~ 550 (673)
|++... +..|. +...+ ..++..+ ...+.+..+..+.....+++..... ...+. ..+..++.-.
T Consensus 256 ll~~~~~~~~~~~~~~~~--~~~~~~~--~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~ 331 (425)
T 3ka7_A 256 LCSEALSKEADAAYFKMV--GTLQPSA--GIKICLAADEPLVGHTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCH 331 (425)
T ss_dssp HTTTTCCTTTTHHHHHHH--HHCCCBE--EEEEEEEESSCSSCSSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEE
T ss_pred hcCCcccccCCHHHHHHh--hCcCCCc--eEEEEeecCCCccCcCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEE
Confidence 332110 00010 00000 0111111 1112222211111112222222110 01110 0122222110
Q ss_pred CCCCCCCCCCCCCCCChhHHHHhHHHHHhhhccccc-cccccceeeeeccCCCCCCCceeecCCCCCcEEEEEccC----
Q psy10285 551 SPTPEQEPPVDNLDVDYEYFNENVWPHLAHRVKAFE-ELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIHFATGFS---- 625 (673)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~-~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~~~~G~~---- 625 (673)
... . ....+. .++..+.+++.+.+++|... +......|....|..++............+|+|+|..+.
T Consensus 332 ~~~--~---~~~~~~-~~~~~~~~~~~l~~~~p~~~~~~~~v~~~~~~~P~~~~~~~~~~~~~~p~~gL~laG~~~~~~g 405 (425)
T 3ka7_A 332 QYV--A---PENVKN-LESEIEMGLEDLKEIFPGKRYEVLLIQSYHDEWPVNRAASGTDPGNETPFSGLYVVGDGAKGKG 405 (425)
T ss_dssp EEE--C---GGGGGG-HHHHHHHHHHHHHHHSTTCCEEEEEEEEEBTTBCSBSSCTTCCCCSBCSSBTEEECSTTSCCTT
T ss_pred ecc--c---cccccc-hHHHHHHHHHHHHHhCCCCceEEEEEEEECCCccccccccCCCCCCCCCcCCeEEeCCccCCCC
Confidence 000 0 001111 12345788899999998732 122345676655654555444444433346999886653
Q ss_pred CccccchhHHHHHHHHHHHc
Q psy10285 626 GHGIQQAPAIGRAVSELILD 645 (673)
Q Consensus 626 g~G~~~ap~~g~~va~~i~~ 645 (673)
|.|+.-+-+.|+.+++.|+|
T Consensus 406 g~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 406 GIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp CCHHHHHHHHHHHHHHC---
T ss_pred CCccHHHHHHHHHHHHHhhC
Confidence 67788888888888888764
No 44
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.23 E-value=3e-10 Score=123.10 Aligned_cols=36 Identities=28% Similarity=0.486 Sum_probs=33.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~---~~g~~Vtvv~~~~~ 177 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTAR---KLGLSVTILEAGDE 177 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH---HTTCEEEEECSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHH---hCCCeEEEEecCCc
Confidence 4578999999999999999999 88999999998876
No 45
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.23 E-value=1.8e-09 Score=115.43 Aligned_cols=201 Identities=11% Similarity=0.050 Sum_probs=109.2
Q ss_pred eeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 403 WFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 403 ~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
.++...+...|.+.+.+.|++++. ++|+.+..++ +++.++.... +|+..+++||.||.|.|..+
T Consensus 98 ~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--------------~~~~~v~~~~-~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 98 VLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--------------GKVAGAKIRH-NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--------------TEEEEEEEEE-TTEEEEEEEEEEEECCCTTC
T ss_pred EEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc--------------ceeeeeeecc-cccceEEEEeEEEeCCcccc
Confidence 467788889999999999999995 5899988776 4555544433 34346799999999999886
Q ss_pred HHHHHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEc---C-CCceEEEecCCceEEe--cCCCCCC
Q psy10285 482 GQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVID---T-TGTYFRREGLGNYYIC--GKSPTPE 555 (673)
Q Consensus 482 ~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~---~-~~~y~~~~~~~g~~i~--G~~~~~~ 555 (673)
. +.+.+++..+.... .......+......+..+. ...++.. + ...|+.|.++ +...+ +......
T Consensus 163 ~-vr~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~-~~~~vg~~~~~~~~ 232 (397)
T 3oz2_A 163 E-FGRWAGLKSVILAR-------NDIISALQYRMINVDVDPD-YTDFYLGSIAPAGYIWVFPKGE-GMANVGIGSSINWI 232 (397)
T ss_dssp H-HHHHHTCGGGCCCG-------GGEEEEEEEEEESCCCCTT-EEEEECSTTSTTEEEEEEEEET-TEEEEEEEEETTTS
T ss_pred H-HHHHcCCCcccccc-------eeeeeeEEEEeeccccCcc-cceeeeeccCCCceEEEeeccc-ceeEEEEeeccchh
Confidence 4 55556653221000 0000000000111111111 0011111 1 2346677653 43322 2211111
Q ss_pred CCCCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCceeecCCCCCcEEEE-------EccCCcc
Q psy10285 556 QEPPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIHFA-------TGFSGHG 628 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~~~-------~G~~g~G 628 (673)
. ..... +..++.+.+..|.+........+.+..+. .....++.+ +|++++ ..++|.|
T Consensus 233 ~---------~~~~~-~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~-----~~v~lvGDAA~~~~P~~G~G 296 (397)
T 3oz2_A 233 H---------NRFEL-KNYLDRFIENHPGLKKGQDIQLVTGGVSV-SKVKMPITM-----PGLMLVGDAARLIDPITGGG 296 (397)
T ss_dssp C---------SHHHH-HHHHHHHHHTCHHHHTSEEEEEEEEEEEC-CCCCSCCEE-----TTEEECGGGGTCSCTTTCCC
T ss_pred h---------hhhhH-HHHHHHHHHhCccccccceeeeeeccccc-cCcccceee-----eeEEEcccccccCCCCcchh
Confidence 0 11222 44555556667777777777778777664 433334332 455442 2357888
Q ss_pred ccchhHHHHHHHHHHH
Q psy10285 629 IQQAPAIGRAVSELIL 644 (673)
Q Consensus 629 ~~~ap~~g~~va~~i~ 644 (673)
+.+|...|..+|+.+.
T Consensus 297 i~~A~~~g~~~A~~i~ 312 (397)
T 3oz2_A 297 IANAIVSGMYAAQVTK 312 (397)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888877777776653
No 46
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.22 E-value=4.2e-11 Score=133.65 Aligned_cols=206 Identities=12% Similarity=0.001 Sum_probs=119.6
Q ss_pred CceeeCHHHHHHHHHHHHHHcCCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCC
Q psy10285 400 KEGWFDPWLYLNAVKKKAISLGAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGA 479 (673)
Q Consensus 400 ~~g~i~~~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~ 479 (673)
....+++..+...|.+.+++.|++++.++|+++..+++ +.+.+ |++.+|+ +++||.||.|+|.
T Consensus 166 ~~~~~~~~~l~~~L~~~a~~~gv~~~~~~v~~i~~~~~-------------~~~~~--v~~~~g~--~~~ad~vV~A~G~ 228 (511)
T 2weu_A 166 YAYHFDADEVARYLSEYAIARGVRHVVDDVQHVGQDER-------------GWISG--VHTKQHG--EISGDLFVDCTGF 228 (511)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEECCEEEEEECTT-------------SCEEE--EEESSSC--EEECSEEEECCGG
T ss_pred eeEEEcHHHHHHHHHHHHHHCCCEEEECeEeEEEEcCC-------------CCEEE--EEECCCC--EEEcCEEEECCCc
Confidence 34568999999999999999999999669999988654 33444 7777783 7999999999999
Q ss_pred CcHHHHHHcCCCCCcccccccccccCcceee-eeEEEEeCCCCC-CCCCC-e-EEcCCCceEEEecCCceEEecCCCCCC
Q psy10285 480 YSGQVARMLKIGDKNQEQGFLFVPLPVEPRK-RYVYCFESPRGP-GVNTP-M-VIDTTGTYFRREGLGNYYICGKSPTPE 555 (673)
Q Consensus 480 ~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r-~~~~~~~~~~~~-~~~~~-~-~~~~~~~y~~~~~~~g~~i~G~~~~~~ 555 (673)
++..+...+++..+ .. -+..+.. ...+.+..+..+ ..... . ....+..|+.|..+ + ..+|......
T Consensus 229 ~S~~~~~~~g~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~-~~~g~~~~~~ 298 (511)
T 2weu_A 229 RGLLINQTLGGRFQ-------SF-SDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-R-DGNGYVYSDE 298 (511)
T ss_dssp GCCCCCCCTCCCEE-------EC-TTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-E-EEEEEEECTT
T ss_pred chHHHHHHhCCCCc-------cc-cccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-c-eEEEEEECCC
Confidence 88654444443210 00 0112222 222223322110 00111 1 12223467778743 2 3222211110
Q ss_pred CCCCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCceeecCCCCCcEEEEEccCCccccchhHH
Q psy10285 556 QEPPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIHFATGFSGHGIQQAPAI 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~~~~G~~g~G~~~ap~~ 635 (673)
. .+.+...+.+.+.+ ...|.+....+...|.|.++....++.++||.-. .....+.|.|+.+|...
T Consensus 299 ----~----~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~rv~liGDAA-----h~~~P~~g~G~~~a~~d 364 (511)
T 2weu_A 299 ----F----ISPEEAERELRSTV-APGRDDLEANHIQMRIGRNERTWINNCVAVGLSA-----AFVEPLESTGIFFIQHA 364 (511)
T ss_dssp ----T----SCHHHHHHHHHHHH-CTTCTTSCCEEEECCCEEESCSEETTEEECGGGT-----EECCGGGCCHHHHHHHH
T ss_pred ----C----CCHHHHHHHHHHHh-CcccccccceeEEeeccccccccCCCEEEEechh-----hccCccccccHHHHHHH
Confidence 0 01223323343333 2234444455556677876643457778888532 24456789999999999
Q ss_pred HHHHHHHHHcC
Q psy10285 636 GRAVSELILDA 646 (673)
Q Consensus 636 g~~va~~i~~~ 646 (673)
|..+++++.++
T Consensus 365 a~~La~~l~~~ 375 (511)
T 2weu_A 365 IEQLVKHFPGE 375 (511)
T ss_dssp HHHHHHTCCCT
T ss_pred HHHHHHHhccC
Confidence 99999999754
No 47
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.21 E-value=1.3e-10 Score=128.14 Aligned_cols=36 Identities=25% Similarity=0.454 Sum_probs=33.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.++||||||||++|+++|++|++. |++|+|||++..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~---g~~V~lie~~~~ 38 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ---GAQVTLIERGTI 38 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESSST
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC---CCEEEEEeCCCC
Confidence 358999999999999999999999 999999999853
No 48
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.21 E-value=4.8e-11 Score=132.40 Aligned_cols=36 Identities=25% Similarity=0.273 Sum_probs=32.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccC---CCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLD---GCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~---g~~v~~ie~~~~ 281 (673)
..++++|||+|.+|+++|..|+ +. |.+|+++++.+.
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~---~~~~~g~~Vtlv~~~~~ 224 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFN---AYKARGGQVDLAYRGDM 224 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHH---HHSCTTCEEEEEESSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHH---hhccCcCeEEEEEcCCC
Confidence 3578999999999999999998 66 999999998776
No 49
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.21 E-value=5.9e-11 Score=130.82 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=33.0
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+|||||||||++|+++|..|++. |++|+|||++..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~---g~~V~lie~~~~ 40 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL---GLKVLAVEAGEV 40 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSCT
T ss_pred cCCEEEECcCHHHHHHHHHHHHC---CCeEEEEeCCCC
Confidence 59999999999999999999999 999999999864
No 50
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.20 E-value=7.4e-11 Score=130.55 Aligned_cols=36 Identities=31% Similarity=0.415 Sum_probs=33.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 182 ~~~~vvViGgG~~g~e~A~~l~---~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 182 IPKRLTIIGGGIIGLEMGSVYS---RLGSKVTVVEFQPQ 217 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHH---HTTCEEEEECSSSS
T ss_pred cCceEEEECCCHHHHHHHHHHH---HcCCEEEEEEeCCc
Confidence 3578999999999999999999 88999999999876
No 51
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.20 E-value=1.5e-10 Score=127.98 Aligned_cols=36 Identities=31% Similarity=0.450 Sum_probs=33.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+|||||||||++|+++|+.|++. |++|+|||++..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~---g~~V~liE~~~~ 45 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY---GAKTLLVEAKAL 45 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT---SCCEEEEESSCT
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC---CCcEEEEeCCCc
Confidence 469999999999999999999999 999999999854
No 52
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.20 E-value=6.9e-10 Score=123.31 Aligned_cols=57 Identities=18% Similarity=0.149 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 407 WLYLNAVKKKAISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 407 ~~~~~~l~~~~~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
..+.++|.+.+++.|++|+ +++|++|+.++ +++++ |++.+|+ ++.||.||.+++.+.
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~--------------~~~~g--V~~~~g~--~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTG--------------NKIEA--VHLEDGR--RFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET--------------TEEEE--EEETTSC--EEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeC--------------CeEEE--EEecCCc--EEEcCEEEECCCHHH
Confidence 6889999999999999999 56999999887 56767 8888884 899999999998763
No 53
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.20 E-value=1.3e-10 Score=128.18 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
+|||+|||||++|+++|+.|++. |++|+|||++.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~---g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL---GMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC---CCeEEEEeCCC
Confidence 48999999999999999999999 99999999984
No 54
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.20 E-value=1.9e-11 Score=127.04 Aligned_cols=35 Identities=17% Similarity=0.347 Sum_probs=33.1
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.|||||||||+||++||++|+++ |++|+|||++..
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~---g~~v~liE~~~~ 38 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRS---SLKPVMYEGFMA 38 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT---TCCCEEECCSSG
T ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCCEEEEecCCC
Confidence 49999999999999999999999 999999999865
No 55
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.19 E-value=4.2e-10 Score=116.59 Aligned_cols=36 Identities=14% Similarity=0.324 Sum_probs=32.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+.+|..|+ ..+.+|+++++.+.
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~---~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLA---NICSKIYLIHRRDE 181 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHH---TTSSEEEEECSSSS
T ss_pred CcCEEEEECCCHHHHHHHHHHH---hhCCEEEEEEeCCC
Confidence 4578999999999999999999 88999999998776
No 56
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.19 E-value=3.2e-11 Score=133.93 Aligned_cols=35 Identities=26% Similarity=0.365 Sum_probs=33.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+|||+|||||++|+++|+.|++. |++|+|||++..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~---G~~V~liE~~~~ 42 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH---TDKVVLIEGGAY 42 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT---CSCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC---CCcEEEEeCCCC
Confidence 59999999999999999999999 999999999865
No 57
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.19 E-value=3.7e-10 Score=125.63 Aligned_cols=35 Identities=29% Similarity=0.471 Sum_probs=32.9
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+|||||||||++|+++|+.|++. |++|+|||++..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~---g~~V~liE~~~~ 36 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH---NAKVALVEKSRL 36 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT---TCCEEEEESSST
T ss_pred ccCEEEECCCHHHHHHHHHHHHC---CCcEEEEeCCCc
Confidence 48999999999999999999999 999999999864
No 58
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.19 E-value=9.3e-11 Score=130.45 Aligned_cols=38 Identities=29% Similarity=0.398 Sum_probs=33.1
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+|||||||||++|+++|+.|++....|++|+|||++..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~ 39 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGI 39 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCc
Confidence 48999999999999999999998322789999999864
No 59
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.18 E-value=1.3e-10 Score=129.15 Aligned_cols=34 Identities=35% Similarity=0.549 Sum_probs=31.7
Q ss_pred CCccccEEEECCChHHHHHHHHHHH-hcCCCceEEEEe
Q psy10285 97 FPTHVDILIIGGGAIGSSIAYFIKE-KVLDGCRVAVVD 133 (673)
Q Consensus 97 ~~~~~dvviiG~G~~G~~~A~~l~~-~~~~g~~v~vie 133 (673)
|..+|||+|||||++|+++|+.|++ . |++|+|||
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~---G~~V~liE 38 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLY---GKRVAVVD 38 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHH---CCCEEEEE
T ss_pred cccccCEEEECCChhHHHHHHHHHHhc---CCeEEEEe
Confidence 4456999999999999999999999 9 99999999
No 60
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.18 E-value=1.2e-09 Score=119.25 Aligned_cols=36 Identities=25% Similarity=0.387 Sum_probs=32.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~---~~G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAI---KANMHVTLLDTAAR 183 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH---HTTCEEEEECSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHH---hCCCEEEEEEeCCc
Confidence 3578999999999999999999 88999999998765
No 61
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.17 E-value=2.4e-10 Score=126.23 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=44.6
Q ss_pred HHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcH-HHHHHc
Q psy10285 411 NAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSG-QVARML 488 (673)
Q Consensus 411 ~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~-~l~~~~ 488 (673)
..+.+.+++.|++++. ++|++++.+++ .+.|.+.+|+ ++.+|.||+|+|.... .++..+
T Consensus 206 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~-----------------~v~v~~~~g~--~i~aD~Vv~a~G~~p~~~l~~~~ 266 (472)
T 3iwa_A 206 QMLRHDLEKNDVVVHTGEKVVRLEGENG-----------------KVARVITDKR--TLDADLVILAAGVSPNTQLARDA 266 (472)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEESSS-----------------BEEEEEESSC--EEECSEEEECSCEEECCHHHHHH
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEccCC-----------------eEEEEEeCCC--EEEcCEEEECCCCCcCHHHHHhC
Confidence 3456667778999995 49999987553 3446666773 8999999999997654 466666
Q ss_pred CC
Q psy10285 489 KI 490 (673)
Q Consensus 489 g~ 490 (673)
|+
T Consensus 267 gl 268 (472)
T 3iwa_A 267 GL 268 (472)
T ss_dssp TC
T ss_pred Cc
Confidence 64
No 62
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.17 E-value=2.7e-09 Score=117.12 Aligned_cols=203 Identities=16% Similarity=0.074 Sum_probs=112.3
Q ss_pred eeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcC-CCCeeEEecCEEEEcCCC
Q psy10285 402 GWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDE-KGELKTITFAICVIAAGA 479 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~-~G~~~~i~ad~VVlAtG~ 479 (673)
..++...+...|.+.+.+.|++++. ++|+++..++ +++.++.+.+. +|+..+++||.||.|+|.
T Consensus 95 ~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--------------~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~ 160 (453)
T 3atr_A 95 FELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED--------------GYVKGAVLFNRRTNEELTVYSKVVVEATGY 160 (453)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--------------TEEEEEEEEETTTTEEEEEECSEEEECCGG
T ss_pred EEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--------------CEEEEEEEEEcCCCceEEEEcCEEEECcCC
Confidence 3577889999999999999999995 5999998766 45666666654 674458999999999999
Q ss_pred CcHHHHHHcCCCCCcccccccccccCcce---eeeeEEEEeCCCCC-CCCC-CeEEc----C-CCceEEEecCCceEEec
Q psy10285 480 YSGQVARMLKIGDKNQEQGFLFVPLPVEP---RKRYVYCFESPRGP-GVNT-PMVID----T-TGTYFRREGLGNYYICG 549 (673)
Q Consensus 480 ~s~~l~~~~g~~~~~~~~~~~~~~lp~~~---~r~~~~~~~~~~~~-~~~~-~~~~~----~-~~~y~~~~~~~g~~i~G 549 (673)
++. +.+.++...|. .-+..+ ...+...+..+... .... .+++. + +..|+.|..+ +.+.+|
T Consensus 161 ~s~-vr~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~vg 230 (453)
T 3atr_A 161 SRS-FRSKLPPELPI--------TEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGK-NKVNVG 230 (453)
T ss_dssp GCT-TGGGSCTTSGG--------GCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEET-TEEEEE
T ss_pred chh-hHHhcCCCCCc--------ccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCC-CeEEEE
Confidence 875 44555543221 001111 11111112211111 1011 12222 1 3456788754 444333
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHhHHHHHhhhccccccccccceeeeeccCCCCCCCceeecCCCCCcEEEEEc------
Q psy10285 550 KSPTPEQEPPVDNLDVDYEYFNENVWPHLAHRVKAFEELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIHFATG------ 623 (673)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~~~~G------ 623 (673)
........+ .. .. +.+.+.+.++.|.+...++...|.++.+. . .++-... .+|+ ++.|
T Consensus 231 ~~~~~~~~~----~~--~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~p~-~---~~~~~~~--~~~v-~lvGDAAh~~ 294 (453)
T 3atr_A 231 LGIQGGMGY----PS--IH---EYYKKYLDKYAPDVDKSKLLVKGGALVPT-R---RPLYTMA--WNGI-IVIGDSGFTV 294 (453)
T ss_dssp EEEESSSCC----CC--HH---HHHHHHHHHHCTTEEEEEEEEEEEEEEEC-S---SCCSCSE--ETTE-EECGGGGTCS
T ss_pred EEecCCCCC----CC--HH---HHHHHHHHhhhhhcCCCeEEeccceeccC-C---CCCCcee--cCCE-EEEeCcccCC
Confidence 211111110 00 11 23333444445555555666667666542 1 1111101 2454 4556
Q ss_pred --cCCccccchhHHHHHHHHHHH
Q psy10285 624 --FSGHGIQQAPAIGRAVSELIL 644 (673)
Q Consensus 624 --~~g~G~~~ap~~g~~va~~i~ 644 (673)
+.|.|+.+|...|..+|+.+.
T Consensus 295 ~P~~G~G~~~Ai~da~~la~~l~ 317 (453)
T 3atr_A 295 NPVHGGGKGSAMISGYCAAKAIL 317 (453)
T ss_dssp CTTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCccccHHHHHHHHHHHHHHHH
Confidence 789999999998888888875
No 63
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.17 E-value=3.3e-10 Score=125.14 Aligned_cols=36 Identities=22% Similarity=0.423 Sum_probs=33.5
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
+.+|||||||||++|+++|+.|++. |++|+|||++.
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~---g~~V~liE~~~ 39 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQL---GFKTVCIEKNE 39 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT---TCCEEEEECSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC---CCeEEEEeCCC
Confidence 4569999999999999999999999 99999999985
No 64
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.16 E-value=2.6e-10 Score=125.60 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=32.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+|||+|||||++|+++|+.|++. |++|+|||++..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~---G~~V~liE~~~~ 37 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL---GLSTAIVEPKYW 37 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHhC---CCeEEEEeCCCC
Confidence 48999999999999999999999 999999999843
No 65
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.16 E-value=1.4e-10 Score=127.50 Aligned_cols=208 Identities=13% Similarity=0.090 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHHHHH
Q psy10285 408 LYLNAVKKKAISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQVAR 486 (673)
Q Consensus 408 ~~~~~l~~~~~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~l~~ 486 (673)
.+.+.|.+.+.+ ++|+ +++|++|+.+++ ++.|++.+|+ +++||+||+|+..+.. .+
T Consensus 236 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~-----------------~~~v~~~~g~--~~~ad~vi~a~p~~~~--~~ 292 (470)
T 3i6d_A 236 TLVEEIEKQLKL--TKVYKGTKVTKLSHSGS-----------------CYSLELDNGV--TLDADSVIVTAPHKAA--AG 292 (470)
T ss_dssp HHHHHHHHTCCS--EEEECSCCEEEEEECSS-----------------SEEEEESSSC--EEEESEEEECSCHHHH--HH
T ss_pred HHHHHHHHhcCC--CEEEeCCceEEEEEcCC-----------------eEEEEECCCC--EEECCEEEECCCHHHH--HH
Confidence 455555544322 5788 459999998774 5778898884 7999999999987642 22
Q ss_pred HcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCC-C-CCeEEcCC-CceE---------EE--ecCCceEEecCCC
Q psy10285 487 MLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGV-N-TPMVIDTT-GTYF---------RR--EGLGNYYICGKSP 552 (673)
Q Consensus 487 ~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~-~~y~---------~~--~~~~g~~i~G~~~ 552 (673)
.+.- .|. .-....++..++....+.++.+..+.. . ...+.... ...+ .+ ..++..++.+...
T Consensus 293 l~~~-~~~---~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~ 368 (470)
T 3i6d_A 293 MLSE-LPA---ISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVG 368 (470)
T ss_dssp HTTT-STT---HHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEEC
T ss_pred HcCC-chh---hHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEEC
Confidence 2211 011 000112333344333334443321110 0 11122111 1100 01 1112222222110
Q ss_pred CCCCCCCCCCCCCChhHHHHhHHHHHhhhcccccccc--ccceeeeeccCCCCCCCceeecC-----CCCCcEEEEEc-c
Q psy10285 553 TPEQEPPVDNLDVDYEYFNENVWPHLAHRVKAFEELK--VSNAWAGYYDFNYFDENAIIGLH-----PSYHNIHFATG-F 624 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~--i~~~w~G~~~~~t~d~~Piig~~-----~~~~~l~~~~G-~ 624 (673)
... .... ...+.+++.+.+++.+.++||...... ..++|...++..+++..+.+... ...+||+++.. +
T Consensus 369 ~~~-~~~~--~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~ 445 (470)
T 3i6d_A 369 KAG-DESI--VDLSDNDIINIVLEDLKKVMNINGEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASF 445 (470)
T ss_dssp CSS-CCGG--GTSCHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTT
T ss_pred CCC-Cccc--cCCCHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecC
Confidence 000 0001 112346677888999999987543222 46788876654355543322211 11368998888 7
Q ss_pred CCccccchhHHHHHHHHHHHc
Q psy10285 625 SGHGIQQAPAIGRAVSELILD 645 (673)
Q Consensus 625 ~g~G~~~ap~~g~~va~~i~~ 645 (673)
.|.|+..|...|+.+|+.|+.
T Consensus 446 ~g~gv~~a~~sG~~aA~~i~~ 466 (470)
T 3i6d_A 446 EGVGIPDCIDQGKAAVSDALT 466 (470)
T ss_dssp SCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 888888899999999998873
No 66
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.16 E-value=1e-09 Score=121.69 Aligned_cols=34 Identities=38% Similarity=0.491 Sum_probs=31.9
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRD 135 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~ 135 (673)
.+|||+|||||++|+++|+.|++. |++|+|||+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~---G~~V~liEk~ 38 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL---GKKVAVADYV 38 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT---TCCEEEECCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC---CCeEEEEEec
Confidence 469999999999999999999999 9999999973
No 67
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.15 E-value=9e-11 Score=129.12 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=33.0
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+|||||||||++|+++|..|++. |++|+|||++..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~---g~~V~lie~~~~ 39 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL---GIPTVLVEGQAL 39 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH---TCCEEEECSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC---CCEEEEEccCCC
Confidence 358999999999999999999999 999999999654
No 68
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.15 E-value=6.2e-10 Score=125.06 Aligned_cols=37 Identities=32% Similarity=0.554 Sum_probs=33.9
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+.++||||||||++|+++|+.|++. |++|+|||+...
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~---G~~v~iiE~~~~ 50 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL---GRSVHVIETAGD 50 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC---CCCEEEEeCCCC
Confidence 4469999999999999999999999 999999999764
No 69
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.15 E-value=1.6e-09 Score=118.85 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++++|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~---~~g~~Vtlv~~~~~ 181 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLV---KMKKTVHVFESLEN 181 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHH---HTTCEEEEEESSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHH---hCCCeEEEEEccCc
Confidence 3578999999999999999999 88999999998776
No 70
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.15 E-value=6.2e-10 Score=124.34 Aligned_cols=36 Identities=33% Similarity=0.398 Sum_probs=33.0
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..+|||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~---G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQY---GKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHT---TCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC---CCeEEEEeccC
Confidence 3469999999999999999999999 99999999854
No 71
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.15 E-value=2.1e-10 Score=126.00 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=32.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+|||||||||++|+++|..|++. |++|+|||++..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~---g~~V~lie~~~~ 37 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL---GQKVTIVEKGNL 37 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT---TCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHhC---CCeEEEEECCCC
Confidence 58999999999999999999999 999999999843
No 72
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.14 E-value=2.2e-10 Score=129.40 Aligned_cols=192 Identities=19% Similarity=0.151 Sum_probs=114.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcch-hhHHHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRE-NIEMSLFGAEFL 321 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~-~~~~~~~~~~~~ 321 (673)
..+||+|||+|++|+++|+.|+ +.|.+|+||||.+. .++++..+.|++........ ...+......++
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la---~~G~~V~vlEk~~~--------~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~ 188 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAK---KAGANVILVDKAPF--------SGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFI 188 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH---HHTCCEEEECSSSS--------SCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHH---HCCCcEEEEeCCCC--------CCCcccccCceeEccCCHHHHHhCCCCCHHHHH
Confidence 5689999999999999999999 78999999999987 34555566666643221100 000000001122
Q ss_pred HHHHhhccccCCCCCCcceeecCeEEEeccchHHHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEeccCCc
Q psy10285 322 RNIKHHCHVIGEDEPDVNFTPNGYLFCASQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEKE 401 (673)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~~~~~~ 401 (673)
..+.+... +.....+ -....+.....++++...|+++..+.. +.... + ...+ .+..
T Consensus 189 ~~~~~~~~----------~~~~~~~---~~~~~~~~~~~i~~l~~~Gv~~~~~~~------~~g~~---~-~r~~-~~~~ 244 (566)
T 1qo8_A 189 EDAMKGGR----------QQNDIKL---VTILAEQSADGVQWLESLGANLDDLKR------SGGAR---V-DRTH-RPHG 244 (566)
T ss_dssp HHHHHHTT----------TCSCHHH---HHHHHHHHHHHHHHHHHTTCCCCEEEC------CTTCS---S-CCEE-ECSS
T ss_pred HHHHHhcC----------CCCCHHH---HHHHHhccHHHHHHHHhcCCccccccc------cCCCC---C-Ccee-ecCC
Confidence 22211110 0000000 000011122344556666766543210 11000 0 1112 2445
Q ss_pred eeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 402 GWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
+.+.+..++..|.+.+++.|++|+. ++|++|..+++ ++|.++.+.+.+|+..+++||.||+|||++
T Consensus 245 ~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-------------g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 245 GKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD-------------HSVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp SSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT-------------SBEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC-------------CcEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 5567889999999999999999995 59999988764 578887777667754579999999999999
Q ss_pred cH
Q psy10285 481 SG 482 (673)
Q Consensus 481 s~ 482 (673)
+.
T Consensus 312 s~ 313 (566)
T 1qo8_A 312 GM 313 (566)
T ss_dssp TT
T ss_pred cc
Confidence 85
No 73
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.14 E-value=1.1e-09 Score=113.75 Aligned_cols=34 Identities=18% Similarity=0.314 Sum_probs=32.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRD 135 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~ 135 (673)
+.+||+|||||++|+++|+.|++. |++|+|||++
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~---g~~v~lie~~ 47 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARY---MLKTLVIGET 47 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESS
T ss_pred CccCEEEECccHHHHHHHHHHHHC---CCcEEEEecc
Confidence 468999999999999999999999 9999999997
No 74
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.12 E-value=2.5e-10 Score=129.13 Aligned_cols=206 Identities=13% Similarity=0.110 Sum_probs=112.7
Q ss_pred CCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcC-CCCeeEEecCEEEEc
Q psy10285 399 EKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDE-KGELKTITFAICVIA 476 (673)
Q Consensus 399 ~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~-~G~~~~i~ad~VVlA 476 (673)
+....++...+...|.+.+++.|++++. ++|+++..++ +.+.+ |.+. +|+..+++||.||.|
T Consensus 120 ~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--------------g~~~~--V~~~~~G~~~~i~AdlVV~A 183 (591)
T 3i3l_A 120 DHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD--------------PDRVV--LTVRRGGESVTVESDFVIDA 183 (591)
T ss_dssp SCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS--------------TTCEE--EEEEETTEEEEEEESEEEEC
T ss_pred CeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--------------CCEEE--EEEecCCceEEEEcCEEEEC
Confidence 4456788999999999999999999995 4999998764 23344 5554 564458999999999
Q ss_pred CCCCcHHHHHHcCCCCCcccccccccccCcceeeeeEEE--EeCC-C--CCCCCCCe--EEcCCCceEEEecCCceEEec
Q psy10285 477 AGAYSGQVARMLKIGDKNQEQGFLFVPLPVEPRKRYVYC--FESP-R--GPGVNTPM--VIDTTGTYFRREGLGNYYICG 549 (673)
Q Consensus 477 tG~~s~~l~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~--~~~~-~--~~~~~~~~--~~~~~~~y~~~~~~~g~~i~G 549 (673)
+|.++. +.+.+++.. +....+...+. +... . .+...... ....+..|+.|.. ++.+.++
T Consensus 184 dG~~S~-lr~~lg~~~------------~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~-~~~~sv~ 249 (591)
T 3i3l_A 184 GGSGGP-ISRKLGVRQ------------YDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIK-DDLYSVG 249 (591)
T ss_dssp CGGGCH-HHHHHTCEE------------EEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECS-SSEEEEE
T ss_pred CCCcch-hHHHcCCCC------------CCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECC-CCeEEEE
Confidence 999774 556566421 11111222211 2211 1 11111111 1222346778875 3444333
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHhHHHHHhhhcccc----------ccccccceeeeeccCCCCCCCceeecCCCCCcEE
Q psy10285 550 KSPTPEQEPPVDNLDVDYEYFNENVWPHLAHRVKAF----------EELKVSNAWAGYYDFNYFDENAIIGLHPSYHNIH 619 (673)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l----------~~~~i~~~w~G~~~~~t~d~~Piig~~~~~~~l~ 619 (673)
............ ..+. +++++.+.+.+|.+ ........|.+.......++..+||.-. .
T Consensus 250 ~~~~~~~~~~l~--~~~~----~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLIGDAA-----h 318 (591)
T 3i3l_A 250 LVVDRSKSAEVR--EQGA----DAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGDAA-----C 318 (591)
T ss_dssp EEEEGGGHHHHH--HHCH----HHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEEEESCSEETTEEECGGGT-----C
T ss_pred EEcCHHHHhhhc--cCCH----HHHHHHHHHhCHHHHHHHhcCccccCceEecccccchhhcccCCEEEEcccc-----c
Confidence 211110000000 0011 22233333333321 1233445566654444667777888432 2
Q ss_pred EEEccCCccccchhHHHHHHHHHHHc
Q psy10285 620 FATGFSGHGIQQAPAIGRAVSELILD 645 (673)
Q Consensus 620 ~~~G~~g~G~~~ap~~g~~va~~i~~ 645 (673)
.+..+.|.|+.+|...|..+|+.|..
T Consensus 319 ~~~Pl~GqGinlAl~dA~~LA~~L~~ 344 (591)
T 3i3l_A 319 FTDPLFSQGVHLASQSAVSAAAAIDR 344 (591)
T ss_dssp BCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcccccHHHHHHHHHHHHHHHHH
Confidence 34567888999999988888887753
No 75
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.12 E-value=1.7e-09 Score=112.07 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=32.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+++|..|+ ..+.+|+++++.+.
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~---~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLA---GIVEHVTLLEFAPE 178 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHH---TTBSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHH---HhCCEEEEEEeCcc
Confidence 4578999999999999999999 88999999998776
No 76
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.12 E-value=4.2e-10 Score=124.12 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
+|||+|||||++|+++|+.|++. |++|+|||++.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~---g~~V~liE~~~ 39 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL---GFKTTCIEKRG 39 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH---TCCEEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC---CCeEEEEeCCC
Confidence 58999999999999999999999 99999999984
No 77
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.12 E-value=1.3e-09 Score=114.18 Aligned_cols=36 Identities=28% Similarity=0.523 Sum_probs=33.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||+|||||++|+++|+.|++. |++|+|||++..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~---g~~v~lie~~~~ 39 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR---GLSFRFVDPLPE 39 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC---CCCEEEEeCCCC
Confidence 358999999999999999999999 999999999753
No 78
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.11 E-value=1.6e-09 Score=112.22 Aligned_cols=36 Identities=17% Similarity=0.294 Sum_probs=32.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+++|..|+ +.+.+|+++++.+.
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~---~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLA---NICKKVYLIHRRDG 177 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHH---TTSSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHH---hcCCEEEEEeeCCc
Confidence 4578999999999999999999 88999999998766
No 79
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.11 E-value=5.1e-10 Score=126.56 Aligned_cols=187 Identities=12% Similarity=0.142 Sum_probs=112.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcchhhHHH--HHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRENIEMS--LFGAEF 320 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~~~~~~--~~~~~~ 320 (673)
..+||+|||+|++|+++|+.|+ +.|.+|+|+||.+. .++++..+.|++...... ....+. .....+
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la---~~G~~V~vlEk~~~--------~gg~s~~a~gg~~~~~~~-~~~~~g~~ds~~~~ 192 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISAT---DSGAKVILIEKEPV--------IGGNAKLAAGGMNAAWTD-QQKAKKITDSPELM 192 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHH---HTTCCEEEECSSSS--------SCTTGGGCCSCEECSSCH-HHHHTTCCCCHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHH---HCCCcEEEEeCCCC--------CCCchhhcCceEEeCCCH-HHHHhCCCCCHHHH
Confidence 4589999999999999999999 88999999999987 345555555655432110 000000 000111
Q ss_pred HHHHHhhccccCCCCCCcceeecCeEEEeccchHH----HHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEe
Q psy10285 321 LRNIKHHCHVIGEDEPDVNFTPNGYLFCASQDGAA----TLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACL 396 (673)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~ 396 (673)
+..+...-. +. .++.... .....++++...|+++..+. ..+.. .+ ...+
T Consensus 193 ~~~~~~~g~----------~~-------~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~g~---~~-~r~~ 245 (571)
T 1y0p_A 193 FEDTMKGGQ----------NI-------NDPALVKVLSSHSKDSVDWMTAMGADLTDVG------MMGGA---SV-NRAH 245 (571)
T ss_dssp HHHHHHHTT----------TC-------SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEE------CCTTC---SS-CCEE
T ss_pred HHHHHHhcC----------CC-------CCHHHHHHHHHccHHHHHHHHhcCCCCccCc------ccCCc---CC-CeeE
Confidence 222111000 00 0111111 11233445556676543210 01100 01 1112
Q ss_pred ccCCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEE
Q psy10285 397 GLEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVI 475 (673)
Q Consensus 397 ~~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVl 475 (673)
.+..+...+..++..|.+.+++.|++|+. ++|++|..+++ ++|.++.+.+.+|+..+++||.||+
T Consensus 246 -~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-------------g~v~Gv~~~~~~g~~~~i~a~~VVl 311 (571)
T 1y0p_A 246 -RPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK-------------GTVKGILVKGMYKGYYWVKADAVIL 311 (571)
T ss_dssp -ESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT-------------SCEEEEEEEETTTEEEEEECSEEEE
T ss_pred -ecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC-------------CeEEEEEEEeCCCcEEEEECCeEEE
Confidence 23344566789999999999999999995 69999998764 5788877776577555799999999
Q ss_pred cCCCCcH
Q psy10285 476 AAGAYSG 482 (673)
Q Consensus 476 AtG~~s~ 482 (673)
|||+++.
T Consensus 312 AtGg~~~ 318 (571)
T 1y0p_A 312 ATGGFAK 318 (571)
T ss_dssp CCCCCTT
T ss_pred eCCCccc
Confidence 9999875
No 80
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.11 E-value=1.8e-09 Score=119.47 Aligned_cols=33 Identities=36% Similarity=0.528 Sum_probs=31.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEec
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDR 134 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~ 134 (673)
.+|||+|||||++|+++|+.|++. |++|+|||+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~---G~~V~liEk 40 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN---GARVACLDF 40 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT---TCCEEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC---CCEEEEEEe
Confidence 469999999999999999999999 999999995
No 81
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.11 E-value=2.8e-10 Score=125.64 Aligned_cols=207 Identities=11% Similarity=0.069 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc-HHHH
Q psy10285 408 LYLNAVKKKAISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS-GQVA 485 (673)
Q Consensus 408 ~~~~~l~~~~~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s-~~l~ 485 (673)
.+...|.+.+.+ ++|+ +++|++|..+++ ++.|++.+| +++||+||+|++.+. ..++
T Consensus 237 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~-----------------~~~v~~~~g---~~~ad~vV~a~p~~~~~~ll 294 (475)
T 3lov_A 237 SLIERLEEVLER--SEIRLETPLLAISREDG-----------------RYRLKTDHG---PEYADYVLLTIPHPQVVQLL 294 (475)
T ss_dssp HHHHHHHHHCSS--CEEESSCCCCEEEEETT-----------------EEEEECTTC---CEEESEEEECSCHHHHHHHC
T ss_pred HHHHHHHhhccC--CEEEcCCeeeEEEEeCC-----------------EEEEEECCC---eEECCEEEECCCHHHHHHHc
Confidence 455555554432 6888 569999998765 678899888 799999999999864 3333
Q ss_pred HHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCC-CCeEEcCC-CceE---------EEec-CCceEEecCCCC
Q psy10285 486 RMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVN-TPMVIDTT-GTYF---------RREG-LGNYYICGKSPT 553 (673)
Q Consensus 486 ~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~-~~~~~~~~-~~y~---------~~~~-~~g~~i~G~~~~ 553 (673)
... |. -....++..++....+.++.+...... ..++.... ...+ .+.. .+..++.+....
T Consensus 295 ~~~----~~----~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~ 366 (475)
T 3lov_A 295 PDA----HL----PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLRAFVGR 366 (475)
T ss_dssp TTS----CC----HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEEEEECB
T ss_pred Ccc----CH----HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEEEEeCC
Confidence 211 11 011234555555555556643210000 11222111 1100 0100 011222211100
Q ss_pred CCCCCCCCCCCCChhHHHHhHHHHHhhhcccccc--ccccceeeeeccCCCCCCCceeecC-----CCCCcEEEEE-ccC
Q psy10285 554 PEQEPPVDNLDVDYEYFNENVWPHLAHRVKAFEE--LKVSNAWAGYYDFNYFDENAIIGLH-----PSYHNIHFAT-GFS 625 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~--~~i~~~w~G~~~~~t~d~~Piig~~-----~~~~~l~~~~-G~~ 625 (673)
.. .... ...+.+++.+.+++.+.++|+.-.. ....++|...++..+++....+..+ ...+||+++. .+.
T Consensus 367 ~~-~~~~--~~~~~e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~ 443 (475)
T 3lov_A 367 PG-NDHL--VHESDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYD 443 (475)
T ss_dssp TT-BCGG--GGSCHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTS
T ss_pred CC-CCcc--cCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCC
Confidence 00 0000 1123456668888899999864221 1235678876554355543222111 0136898877 578
Q ss_pred CccccchhHHHHHHHHHHHcCC
Q psy10285 626 GHGIQQAPAIGRAVSELILDAE 647 (673)
Q Consensus 626 g~G~~~ap~~g~~va~~i~~~~ 647 (673)
|.|+.-|...|+.+|+.|...-
T Consensus 444 g~g~~~a~~sG~~aA~~i~~~l 465 (475)
T 3lov_A 444 GVGLPDCVASAKTMIESIELEQ 465 (475)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999998643
No 82
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.10 E-value=3.7e-09 Score=114.72 Aligned_cols=55 Identities=11% Similarity=0.202 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 406 PWLYLNAVKKKAISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 406 ~~~~~~~l~~~~~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
+..+.+.|.+.+++.|++|+ +++|++|..+++ ++ |.+ +| .+++||.||+|+|.+.
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~-----------------~v-V~~-~g--~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEK-----------------KV-YTR-DN--EEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTT-----------------EE-EET-TC--CEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECC-----------------EE-EEe-CC--cEEEeCEEEECCCHHH
Confidence 47899999999999999999 459999998764 45 554 45 3899999999999864
No 83
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.10 E-value=4.3e-09 Score=116.71 Aligned_cols=36 Identities=25% Similarity=0.340 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~---~~g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQ---RKGKEVVLIDVVDT 228 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHH---HTTCEEEEEESSSS
T ss_pred CCceEEEECCCHHHHHHHHHHH---HCCCeEEEEEcccc
Confidence 4578999999999999999999 78999999998776
No 84
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.09 E-value=4.5e-09 Score=115.13 Aligned_cols=36 Identities=28% Similarity=0.332 Sum_probs=33.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++++|||+|.+|+++|..|+ +.|.+|+++|+.+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~---~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFA---KAGKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHH---HTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHH---HCCCeEEEEecCcc
Confidence 4578999999999999999999 88999999998776
No 85
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.09 E-value=7.2e-09 Score=117.00 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=32.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++|+|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~---~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLH---HLGIKTTLLELADQ 185 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHH---HTTCEEEEEESSSS
T ss_pred CCEEEEECCCHHHHHHHHHHH---hcCCcEEEEEcCCc
Confidence 468999999999999999999 88999999998776
No 86
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.09 E-value=1.1e-09 Score=125.29 Aligned_cols=195 Identities=16% Similarity=0.116 Sum_probs=109.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcch---hhHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRE---NIEMSLFGAE 319 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~---~~~~~~~~~~ 319 (673)
..+||+|||+|.+|+++|+.|+ +.|.+|+||||... ..+++..+.|++........ ......
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aa---e~G~~V~vlEK~~~--------~~g~s~~a~GGi~a~~~~~~~g~~ds~~~---- 68 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQ---QKGLSTIVLSLIPV--------KRSHSAAAQGGMQASLGNSKMSDGDNEDL---- 68 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHH---TTTCCEEEECSSCG--------GGSGGGGCCSCEECCCCCSGGGTTCCHHH----
T ss_pred ccccEEEECchHHHHHHHHHHH---HCCCcEEEEeccCC--------CCCcccccCCCeEeccCCcccCCCCCHHH----
Confidence 3579999999999999999999 88999999999887 33444444455443222110 000000
Q ss_pred HHHHHHhhccccCCCCCCcceeecCeEEEeccchHHHHHHHHHHHHHcCCcce-----------------eeCHhhHHhh
Q psy10285 320 FLRNIKHHCHVIGEDEPDVNFTPNGYLFCASQDGAATLEKNHQLQKELGAKNV-----------------LLGPEQLKAK 382 (673)
Q Consensus 320 ~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~g~~~~-----------------~l~~~~~~~~ 382 (673)
++.++.+... ..++.. . -....+.-...++++...|+++. +++++++...
T Consensus 69 ~~~dt~~~g~------~~~d~~---~----v~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~ 135 (660)
T 2bs2_A 69 HFMDTVKGSD------WGCDQK---V----ARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGL 135 (660)
T ss_dssp HHHHHHHHTT------TCSCHH---H----HHHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTS
T ss_pred HHHHHHHhcC------CCCCHH---H----HHHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhh
Confidence 1111111000 000000 0 00001111223344455554432 3333333322
Q ss_pred CCCCCcccceeEEeccCCc---eeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEE
Q psy10285 383 FPWLNTDDIALACLGLEKE---GWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVV 458 (673)
Q Consensus 383 ~p~~~~~~~~~g~~~~~~~---g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V 458 (673)
++. ...++.. .+.. +...+..++..|.+.+++.|++|+. +.|++|..++ ++|.++.+
T Consensus 136 ~~~----~~~gg~~-~~R~~~~~d~tG~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~--------------g~v~Gv~~ 196 (660)
T 2bs2_A 136 IHS----RDFGGTK-KWRTCYTADATGHTMLFAVANECLKLGVSIQDRKEAIALIHQD--------------GKCYGAVV 196 (660)
T ss_dssp BCC----BCCTTCS-SCCEECSTTCHHHHHHHHHHHHHHHHTCEEECSEEEEEEEEET--------------TEEEEEEE
T ss_pred hcc----ccccccc-cceeEeeCCCCHHHHHHHHHHHHHhCCCEEEECcEEEEEEecC--------------CEEEEEEE
Confidence 210 0011111 1111 0112568899999999999999995 5999998755 67888766
Q ss_pred E-cCCCCeeEEecCEEEEcCCCCcHHH
Q psy10285 459 R-DEKGELKTITFAICVIAAGAYSGQV 484 (673)
Q Consensus 459 ~-t~~G~~~~i~ad~VVlAtG~~s~~l 484 (673)
. +.+|+...+.||.||+|||+++...
T Consensus 197 ~~~~~G~~~~i~A~~VVlATGG~~~~y 223 (660)
T 2bs2_A 197 RDLVTGDIIAYVAKGTLIATGGYGRIY 223 (660)
T ss_dssp EETTTCCEEEEECSEEEECCCCCGGGS
T ss_pred EECCCCcEEEEEcCEEEEccCcchhhc
Confidence 5 3677656799999999999998653
No 87
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.09 E-value=2.8e-10 Score=126.04 Aligned_cols=37 Identities=32% Similarity=0.572 Sum_probs=33.6
Q ss_pred CCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 97 FPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 97 ~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
|+.+|||||||||++|+++|+.|++. |++|+|||++.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~---G~~V~liE~~~ 39 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADE---GLKVAIVERYK 39 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhC---CCeEEEEeCCC
Confidence 44569999999999999999999999 99999999954
No 88
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.09 E-value=5.8e-10 Score=124.32 Aligned_cols=61 Identities=16% Similarity=0.210 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecC-EEEEcCCCCcH
Q psy10285 408 LYLNAVKKKAISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFA-ICVIAAGAYSG 482 (673)
Q Consensus 408 ~~~~~l~~~~~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad-~VVlAtG~~s~ 482 (673)
.++..|.+.+++.|++|+ +++|++|..+++ ++|.++.+.. +|+..+++|+ .||+|||+|+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~-------------g~v~GV~~~~-~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDT-------------GRVVGIVAKQ-YGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTT-------------CCEEEEEEEE-TTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCC-------------CcEEEEEEEE-CCcEEEEEeCCeEEEeCCChhh
Confidence 789999999999999999 469999998754 7888977665 3434579995 99999999974
No 89
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.07 E-value=4.9e-09 Score=118.99 Aligned_cols=37 Identities=24% Similarity=0.343 Sum_probs=32.6
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..||||||||++|+++|+.|++. ..|.+|+|||++..
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~-~~g~~V~vie~~~~ 72 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRL-SEEDEIIMVERGEY 72 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSSSEEEEECSSSC
T ss_pred CCCEEEECCcHHHHHHHHHHHhh-CcCCCEEEEECCCC
Confidence 47999999999999999999987 34689999999864
No 90
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.07 E-value=5.4e-09 Score=109.12 Aligned_cols=36 Identities=22% Similarity=0.506 Sum_probs=33.4
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
...+||+|||||++|+++|+.|++. |++|+|||++.
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~---g~~v~lie~~~ 41 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRA---QLSTLILEKGM 41 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHc---CCcEEEEeCCC
Confidence 4568999999999999999999999 99999999984
No 91
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.07 E-value=5.6e-10 Score=120.88 Aligned_cols=36 Identities=31% Similarity=0.555 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~---~~g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATAR---TAGVHVSLVETQPR 179 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH---HTTCEEEEEESSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHH---hCCCEEEEEEeCCc
Confidence 4678999999999999999999 88999999998776
No 92
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.06 E-value=7e-09 Score=114.67 Aligned_cols=36 Identities=36% Similarity=0.491 Sum_probs=32.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~---~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFV---ELGKKVRMIERNDH 220 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHH---HTTCEEEEECCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHH---hcCCeEEEEEeCCc
Confidence 4578999999999999999999 88999999998765
No 93
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.06 E-value=1.4e-08 Score=111.37 Aligned_cols=36 Identities=28% Similarity=0.347 Sum_probs=32.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++++|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~---~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYS---NQNYNVNLIDGHER 183 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHH---TTTCEEEEEESSSS
T ss_pred cCCeEEEECcCHHHHHHHHHHH---hcCCEEEEEEcCCc
Confidence 3578999999999999999999 88999999998776
No 94
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.06 E-value=2.1e-09 Score=119.83 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=59.7
Q ss_pred ceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCC
Q psy10285 401 EGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGA 479 (673)
Q Consensus 401 ~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~ 479 (673)
...++...+...|.+.+++.|++++. ++|++|..++ +++.++.+.+.+|+..+++||.||.|+|.
T Consensus 105 ~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--------------~~v~gv~~~~~dG~~~~i~ad~VI~AdG~ 170 (512)
T 3e1t_A 105 AYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG--------------ERAVGVRYRNTEGVELMAHARFIVDASGN 170 (512)
T ss_dssp EEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET--------------TEEEEEEEECSSSCEEEEEEEEEEECCCT
T ss_pred eeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--------------CEEEEEEEEeCCCCEEEEEcCEEEECCCc
Confidence 34578889999999999999999995 5999999866 56778778888886568999999999999
Q ss_pred CcHHHHHHcC
Q psy10285 480 YSGQVARMLK 489 (673)
Q Consensus 480 ~s~~l~~~~g 489 (673)
++. +.+.++
T Consensus 171 ~S~-vr~~lg 179 (512)
T 3e1t_A 171 RTR-VSQAVG 179 (512)
T ss_dssp TCS-SGGGTC
T ss_pred chH-HHHHcC
Confidence 874 334344
No 95
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.06 E-value=2.1e-09 Score=118.30 Aligned_cols=36 Identities=19% Similarity=0.284 Sum_probs=33.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCC-----ceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDG-----CRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g-----~~v~vie~~~~ 137 (673)
..|||||||||++|+++|+.|++. | .+|+|||+...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~---g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER---AQAQGALEVLFLDKQGD 69 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH---HHHHCCCCEEEEESCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc---ccccCcccEEEEecCCC
Confidence 458999999999999999999999 8 89999999875
No 96
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.05 E-value=2.1e-09 Score=121.66 Aligned_cols=195 Identities=16% Similarity=0.168 Sum_probs=111.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCc--chhhHHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSL--RENIEMSLFGAEF 320 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~--~~~~~~~~~~~~~ 320 (673)
..+||+|||+|.+|+++|+.|+ +.|.+|+||||... ..+++....|++...... ..... . +
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la---~~G~~V~vlEK~~~--------~~g~s~~a~GGi~~~~~~~~~ds~~--~----~ 68 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQIS---QSGQTCALLSKVFP--------TRSHTVSAQGGITVALGNTHEDNWE--W----H 68 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSCG--------GGSGGGGCCSCEECCCCSSSCCCHH--H----H
T ss_pred ccCCEEEECcCHHHHHHHHHHH---HCCCcEEEEecCCC--------CCCcchhhCCccEEcCCCCCCCCHH--H----H
Confidence 4589999999999999999999 78999999999887 334444445555432222 11111 0 1
Q ss_pred HHHHHhhccccCCCCCCcceeecCeEEEeccchHHHHHHHHHHHHHcCCcceeeCHhhHH-hhCCCCCc----ccceeEE
Q psy10285 321 LRNIKHHCHVIGEDEPDVNFTPNGYLFCASQDGAATLEKNHQLQKELGAKNVLLGPEQLK-AKFPWLNT----DDIALAC 395 (673)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~----~~~~~g~ 395 (673)
+.+...... .-++ . ..+ ....+.....++++...|+++.......+. ..++.... ......+
T Consensus 69 ~~d~~~~g~------~~~d--~-~~v----~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~ 135 (588)
T 2wdq_A 69 MYDTVKGSD------YIGD--Q-DAI----EYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTA 135 (588)
T ss_dssp HHHHHHHTT------TCSC--H-HHH----HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEE
T ss_pred HHHHHHhcC------CCCC--H-HHH----HHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEE
Confidence 111111000 0000 0 000 000111123445566777765443221110 00111000 0011111
Q ss_pred eccCCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEc-CCCCeeEEecCEE
Q psy10285 396 LGLEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRD-EKGELKTITFAIC 473 (673)
Q Consensus 396 ~~~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t-~~G~~~~i~ad~V 473 (673)
+ .. ...+..++..|.+.+++.|++|+. +.|++|..+++ ++|.++.+.. .+|+...+.|+.|
T Consensus 136 ~-~~---d~~g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~-------------g~v~Gv~~~~~~~g~~~~i~A~~V 198 (588)
T 2wdq_A 136 A-AA---DRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQD-------------GAVVGCTALCIETGEVVYFKARAT 198 (588)
T ss_dssp C-ST---TCHHHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-------------SCEEEEEEEETTTCCEEEEEEEEE
T ss_pred E-cC---CCCHHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCC-------------CEEEEEEEEEcCCCeEEEEEcCEE
Confidence 1 11 123578899999999999999995 59999998633 6788877664 6676567999999
Q ss_pred EEcCCCCcHHH
Q psy10285 474 VIAAGAYSGQV 484 (673)
Q Consensus 474 VlAtG~~s~~l 484 (673)
|+|||+++...
T Consensus 199 VlAtGg~~~~y 209 (588)
T 2wdq_A 199 VLATGGAGRIY 209 (588)
T ss_dssp EECCCCCGGGS
T ss_pred EECCCCCcccc
Confidence 99999998753
No 97
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.04 E-value=9.2e-10 Score=123.60 Aligned_cols=75 Identities=21% Similarity=0.295 Sum_probs=59.2
Q ss_pred cCCceeeCHHHHHHHHHHHHHHcCCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcC
Q psy10285 398 LEKEGWFDPWLYLNAVKKKAISLGAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAA 477 (673)
Q Consensus 398 ~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAt 477 (673)
.+....+++..+...|.+.+++.|++++.++|+++..+++ +.+.. |.+.+| .+++||.||.|+
T Consensus 156 ~~~~~~i~~~~l~~~L~~~a~~~gv~~~~~~v~~i~~~~~-------------g~~~~--v~~~~g--~~i~ad~vV~A~ 218 (538)
T 2aqj_A 156 MSHAWHFDAHLVADFLKRWAVERGVNRVVDEVVDVRLNNR-------------GYISN--LLTKEG--RTLEADLFIDCS 218 (538)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTTCEEEECCEEEEEECTT-------------SCEEE--EEETTS--CEECCSEEEECC
T ss_pred CCccEEEeHHHHHHHHHHHHHHCCCEEEEeeEeEEEEcCC-------------CcEEE--EEECCC--cEEEeCEEEECC
Confidence 4556789999999999999999999999669999987654 33333 677777 379999999999
Q ss_pred CCCcHHHHHHcC
Q psy10285 478 GAYSGQVARMLK 489 (673)
Q Consensus 478 G~~s~~l~~~~g 489 (673)
|.++..+...++
T Consensus 219 G~~s~~~~~~lg 230 (538)
T 2aqj_A 219 GMRGLLINQALK 230 (538)
T ss_dssp GGGCCCCCCCTC
T ss_pred CCchhhHHHHhC
Confidence 998865444444
No 98
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.04 E-value=1.8e-09 Score=122.59 Aligned_cols=190 Identities=16% Similarity=0.212 Sum_probs=111.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCc--chhhHHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSL--RENIEMSLFGAEF 320 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~--~~~~~~~~~~~~~ 320 (673)
..+||+|||+|.+|+++|+.|+ +.|.+|+||||... ..+++....|++...... ...+. . +
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa---~~G~~V~vlEK~~~--------~~g~s~~a~GGi~a~~~~~~~ds~~--~----~ 79 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLS---EAGFNTACVTKLFP--------TRSHTVAAQGGINAALGNMEDDNWR--W----H 79 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSCG--------GGSGGGGCCSCEECCCCSSSCCCHH--H----H
T ss_pred ccCCEEEECccHHHHHHHHHHH---HCCCcEEEEeccCC--------CCCCchhhCCCcEecCCCCCCCCHH--H----H
Confidence 4589999999999999999999 78999999999877 344444555665543321 11111 1 1
Q ss_pred HHHHHhhccccCCCCCCcceeecCeEEEeccchH----HHHHHHHHHHHHcCCcceeeCHhhHH-hhCCCCCcc-----c
Q psy10285 321 LRNIKHHCHVIGEDEPDVNFTPNGYLFCASQDGA----ATLEKNHQLQKELGAKNVLLGPEQLK-AKFPWLNTD-----D 390 (673)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~l~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~-----~ 390 (673)
+.+...... + ..++... +.....+.++...|+++.......+. ..++..... .
T Consensus 80 ~~dtl~~g~----------~-------l~d~~~v~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~ 142 (621)
T 2h88_A 80 FYDTVKGSD----------W-------LGDQDAIHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQ 142 (621)
T ss_dssp HHHHHHHTT----------T-------CSCHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCB
T ss_pred HHHHHHhcC----------C-------CCCHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCc
Confidence 111110000 0 0011111 11223445566778765443221110 011110000 0
Q ss_pred ceeEEeccCCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEc-CCCCeeEE
Q psy10285 391 IALACLGLEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRD-EKGELKTI 468 (673)
Q Consensus 391 ~~~g~~~~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t-~~G~~~~i 468 (673)
....++ .. ...+..++..|.+.+++.|++|+. +.|++|..++ ++|.++.+.+ .+|+...+
T Consensus 143 ~~R~~~-~~---d~tG~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~--------------g~v~Gv~~~~~~~G~~~~i 204 (621)
T 2h88_A 143 AHRCCC-VA---DRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEN--------------GECRGVIALCIEDGTIHRF 204 (621)
T ss_dssp CCCEEC-ST---TCHHHHHHHHHHHHHTTSCCEEEETEEEEEEEEET--------------TEEEEEEEEETTTCCEEEE
T ss_pred ceeEEE-ec---CCCHHHHHHHHHHHHHhCCCEEEEceEEEEEEEEC--------------CEEEEEEEEEcCCCcEEEE
Confidence 000111 11 113568899999999999999995 5999998765 6788877765 57765689
Q ss_pred ecCEEEEcCCCCcHHH
Q psy10285 469 TFAICVIAAGAYSGQV 484 (673)
Q Consensus 469 ~ad~VVlAtG~~s~~l 484 (673)
.|+.||+|||+++...
T Consensus 205 ~A~~VVlATGG~~~~y 220 (621)
T 2h88_A 205 RAKNTVIATGGYGRTY 220 (621)
T ss_dssp EEEEEEECCCCCGGGS
T ss_pred EcCeEEECCCcccccc
Confidence 9999999999998643
No 99
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.03 E-value=1.7e-09 Score=120.80 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=32.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+++|+|||+|.+|+++|..|+ ..+.+|+++++.+.
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~---~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLA---GIVEHVTLLEFAPE 389 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHH---HHBSEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHH---hhCCEEEEEEeCcc
Confidence 4678999999999999999999 77899999998766
No 100
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.03 E-value=3e-09 Score=111.03 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=32.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+||+|||||++|+++|+.|++. |++|+|||+...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~---g~~v~lie~~~~ 41 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR---QASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC---CCCEEEEEcCCC
Confidence 48999999999999999999999 999999999763
No 101
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.03 E-value=2e-09 Score=118.68 Aligned_cols=36 Identities=31% Similarity=0.457 Sum_probs=33.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~---~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFR---LMGVQTHIIEMLDR 206 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHH---HTTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHH---HcCCEEEEEEeCCc
Confidence 4578999999999999999999 88999999998776
No 102
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.02 E-value=2.9e-09 Score=123.10 Aligned_cols=37 Identities=19% Similarity=0.376 Sum_probs=33.7
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
...+||||||||++|+++|+.|+++ |++|+|||++..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~---G~~V~liE~~~~ 425 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR---GYDVVLAEAGRD 425 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH---TCEEEEECSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHC---CCeEEEEecCCC
Confidence 3468999999999999999999999 999999999753
No 103
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.01 E-value=2e-09 Score=114.68 Aligned_cols=35 Identities=31% Similarity=0.474 Sum_probs=32.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++++|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~---~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLA---EAGYHVKLIHRGAM 177 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHH---HTTCEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHH---hCCCEEEEEeCCCe
Confidence 378999999999999999999 88999999998776
No 104
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.01 E-value=6.6e-09 Score=108.73 Aligned_cols=36 Identities=25% Similarity=0.421 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+.+|..|+ ..+.+|+++++.+.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~---~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLT---KYGSKVYIIHRRDA 193 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHT---TTSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHH---hcCCeEEEEecCCc
Confidence 4578999999999999999999 88999999998776
No 105
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.01 E-value=2.6e-09 Score=120.69 Aligned_cols=188 Identities=16% Similarity=0.185 Sum_probs=109.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcc-hhhHHHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLR-ENIEMSLFGAEFL 321 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~-~~~~~~~~~~~~~ 321 (673)
..+||+|||+|++|+++|+.|+ +.|.+|+|+|+.+. .++.+..+.|++....... ....+......++
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~---~~g~~v~~~e~~~~--------~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~ 193 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSAR---DAGAKVILLEKEPI--------PGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMI 193 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHH---SSSCCEEEECSSSS--------SCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHH---HCCCcEEEEecCCC--------CCcchhhhCCeeEccCCHHHHHhCCCCCHHHHH
Confidence 4679999999999999999999 88999999999887 3444555555553211100 0000000000112
Q ss_pred HHHHhhccccCCCCCCcceeecCeEEEeccchHH----HHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEec
Q psy10285 322 RNIKHHCHVIGEDEPDVNFTPNGYLFCASQDGAA----TLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLG 397 (673)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~~ 397 (673)
..+.+.-. + ..++.... .....++++...|+++..+.. ... ..+. ..+
T Consensus 194 ~~~~~~g~----------~-------~~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~------~gg---~~~~-r~~- 245 (572)
T 1d4d_A 194 DDTMKGGR----------N-------INDPELVKVLANNSSDSIDWLTSMGADMTDVGR------MGG---ASVN-RSH- 245 (572)
T ss_dssp HHHHHHTT----------T-------CSCHHHHHHHHHTHHHHHHHHHHHTCCCCEEEC------CTT---CSSC-CEE-
T ss_pred HHHHHhcC----------C-------CCCHHHHHHHHHccHHHHHHHHhcCCccccccc------cCC---CcCC-eeE-
Confidence 22211100 0 00000011 112234455556665433210 000 0000 111
Q ss_pred cCCceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEc
Q psy10285 398 LEKEGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIA 476 (673)
Q Consensus 398 ~~~~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlA 476 (673)
.+..+...+..++..|.+.+++.|++|+. ++|++|..+++ ++|.++.+.+.+|+..++.||.||+|
T Consensus 246 ~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~-------------g~v~GV~~~~~~G~~~~i~A~~VVlA 312 (572)
T 1d4d_A 246 RPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS-------------GKVTGVLVKGEYTGYYVIKADAVVIA 312 (572)
T ss_dssp ESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC---------------CCEEEEEEEETTTEEEEEECSEEEEC
T ss_pred ecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCC-------------CeEEEEEEEeCCCcEEEEEcCEEEEe
Confidence 13334455778999999999999999994 69999987653 57888777766775557999999999
Q ss_pred CCCCcH
Q psy10285 477 AGAYSG 482 (673)
Q Consensus 477 tG~~s~ 482 (673)
||+++.
T Consensus 313 tGg~~~ 318 (572)
T 1d4d_A 313 AGGFAK 318 (572)
T ss_dssp CCCCTT
T ss_pred CCCCcc
Confidence 999874
No 106
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.00 E-value=1.2e-09 Score=118.31 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=56.9
Q ss_pred eCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc-
Q psy10285 404 FDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS- 481 (673)
Q Consensus 404 i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s- 481 (673)
..+..+...|.+.+++.|++++. ++|++|..+++ ++.|.+.+| +++||.||+|+|+++
T Consensus 129 ~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~-----------------~~~V~~~~g---~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS-----------------GFRVTTSAG---TVDAASLVVASGGKSI 188 (417)
T ss_dssp SCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-----------------EEEEEETTE---EEEESEEEECCCCSSC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-----------------EEEEEECCc---EEEeeEEEECCCCccC
Confidence 34678899999999999999995 59999988764 577888887 899999999999998
Q ss_pred ---------HHHHHHcCCC
Q psy10285 482 ---------GQVARMLKIG 491 (673)
Q Consensus 482 ---------~~l~~~~g~~ 491 (673)
..++..+|+.
T Consensus 189 p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 189 PKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp GGGTCCCHHHHHHHHTTCC
T ss_pred CCCCCCcHHHHHHHHCCCC
Confidence 4677777764
No 107
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.99 E-value=1e-09 Score=121.11 Aligned_cols=207 Identities=11% Similarity=0.024 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHH-H
Q psy10285 407 WLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQ-V 484 (673)
Q Consensus 407 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~-l 484 (673)
..+...|.+.+++.|++|+. ++|++|..+++ . .+.|.+.++ ++.||+||+|++.+... |
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~--------------~--~~~v~~~~~---~~~ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAE--------------G--RWKVSLRDS---SLEADHVISAIPASVLSEL 294 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGG--------------G--CEEEECSSC---EEEESEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCC--------------c--eEEEEECCe---EEEcCEEEECCCHHHHHHh
Confidence 47889999999999999994 59999988764 1 256777555 79999999999876432 2
Q ss_pred HHHcCCCCCcccccccccccCcceeeeeEEEEeCCCCCCCCCCeEEcCCCceEEEecC---------------------C
Q psy10285 485 ARMLKIGDKNQEQGFLFVPLPVEPRKRYVYCFESPRGPGVNTPMVIDTTGTYFRREGL---------------------G 543 (673)
Q Consensus 485 ~~~~g~~~~~~~~~~~~~~lp~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~---------------------~ 543 (673)
++.. .|-... ....++..++-...+.++.+..+. ....|+.|..+ +
T Consensus 295 l~~~---~~~~~~--~l~~~~~~~~~~v~l~~~~~~~~~--------~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~ 361 (477)
T 3nks_A 295 LPAE---AAPLAR--ALSAITAVSVAVVNLQYQGAHLPV--------QGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPP 361 (477)
T ss_dssp SCGG---GHHHHH--HHHTCCEEEEEEEEEEETTCCCSS--------CSSEEECCTTTCSSEEEEECHHHHCGGGSTTTT
T ss_pred cccc---CHHHHH--HHhcCCCCcEEEEEEEECCCCCCC--------CCceEEccCCCCCCceEEEEeccccCCCCCCCC
Confidence 2111 000000 001122222222222222221110 01122222211 1
Q ss_pred ceE---EecCCCCCCCCCCCCCCCCChhHHHHhHHHHHhhhccccccc--cccceeeeeccCCCCCCCceeecCCC----
Q psy10285 544 NYY---ICGKSPTPEQEPPVDNLDVDYEYFNENVWPHLAHRVKAFEEL--KVSNAWAGYYDFNYFDENAIIGLHPS---- 614 (673)
Q Consensus 544 g~~---i~G~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~--~i~~~w~G~~~~~t~d~~Piig~~~~---- 614 (673)
..+ ++|........ ......+.+++.+.+++.+.++++..... ....+|-..+|..+++..+.++.+..
T Consensus 362 ~~~l~~~~gg~~~~~~~--~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~ 439 (477)
T 3nks_A 362 GLRVTVMLGGSWLQTLE--ASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTA 439 (477)
T ss_dssp CEEEEEEECHHHHHHHH--HSSCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH
T ss_pred ceEEEEEECCccccccc--cccCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHh
Confidence 111 11110000000 00001133566677888888877432111 12345554445557777766554321
Q ss_pred -CCcEEEEEc-cCCccccchhHHHHHHHHHHHcCC
Q psy10285 615 -YHNIHFATG-FSGHGIQQAPAIGRAVSELILDAE 647 (673)
Q Consensus 615 -~~~l~~~~G-~~g~G~~~ap~~g~~va~~i~~~~ 647 (673)
.++++++.. +.|.|+.-+...|+.+|+.|.+..
T Consensus 440 ~~~~l~l~G~~~~G~gv~~a~~sg~~aA~~il~~~ 474 (477)
T 3nks_A 440 HRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTE 474 (477)
T ss_dssp TTCSEEECSTTTSCCSHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCEEEEccCCCCCcHHHHHHHHHHHHHHHHhcc
Confidence 357887765 788999999999999999998754
No 108
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.97 E-value=1.5e-08 Score=111.07 Aligned_cols=36 Identities=31% Similarity=0.452 Sum_probs=32.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~---~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFA---AQGKNVTMIVRGER 182 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH---HTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHH---hCCCeEEEEEcCCc
Confidence 3468999999999999999999 88999999998776
No 109
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.96 E-value=2.7e-09 Score=119.53 Aligned_cols=186 Identities=19% Similarity=0.154 Sum_probs=94.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcchhhHHHHHHHHHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRENIEMSLFGAEFLR 322 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~~~~~~~~~~~~~~ 322 (673)
..+||+|||+|++|+++|+.|+ + |.+|+||||... ..+++..+.|++........... .++.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la---~-G~~V~vlEk~~~--------~~g~s~~a~Ggi~~~~~~~ds~~------~~~~ 68 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLA---D-QHQVIVLSKGPV--------TEGSTFYAQGGIAAVFDETDSID------SHVE 68 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHT---T-TSCEEEECSSCT--------TC-------------CCSHHHHH------HHHH
T ss_pred CCCCEEEECccHHHHHHHHHHh---c-CCcEEEEECCCC--------CCCChhhcCCCEEEecCCCCCHH------HHHH
Confidence 4589999999999999999999 8 999999999887 34556666676654433211111 1112
Q ss_pred HHHhhccccCCCCCCcceeecCeEEEeccchHH----HHHHHHHHHHHcCCcceeeC----HhhH-HhhCCCCCccccee
Q psy10285 323 NIKHHCHVIGEDEPDVNFTPNGYLFCASQDGAA----TLEKNHQLQKELGAKNVLLG----PEQL-KAKFPWLNTDDIAL 393 (673)
Q Consensus 323 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~l~~~~~~~~~~g~~~~~l~----~~~~-~~~~p~~~~~~~~~ 393 (673)
+...... + ..++.... .....++++.+.|+++.... ...+ ...++.... .
T Consensus 69 d~l~~g~--------------g---~~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~----~ 127 (540)
T 1chu_A 69 DTLIAGA--------------G---ICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSH----R 127 (540)
T ss_dssp HHHHHTT--------------T---CCCHHHHHHHHHHHHHHHHHHHHTTCC----------------------------
T ss_pred HHHHhhc--------------c---cCCHHHHHHHHHhHHHHHHHHHHcCCCcccCcccCcCCcccccccccccc----C
Confidence 1111100 0 00111111 12334556667787654432 1111 000100000 0
Q ss_pred EEeccCCceeeCHHHHHHHHHHHHHH-cCCeEEE-eceeEEEecCCccccccCCCCCCcc------ceeeEEEEc-CCCC
Q psy10285 394 ACLGLEKEGWFDPWLYLNAVKKKAIS-LGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYH------SVNECVVRD-EKGE 464 (673)
Q Consensus 394 g~~~~~~~g~i~~~~~~~~l~~~~~~-~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~------~v~gv~V~t-~~G~ 464 (673)
..+. . +...+..++..|.+.+++ .|++|+. +.|++|..+++ + +|.++.+.. .+|+
T Consensus 128 r~~~-~--~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-------------g~~~~~~~v~Gv~~~~~~~G~ 191 (540)
T 1chu_A 128 RILH-A--ADATGREVETTLVSKALNHPNIRVLERTNAVDLIVSDK-------------IGLPGTRRVVGAWVWNRNKET 191 (540)
T ss_dssp -----------------CCCHHHHHHCTTEEEECSEEEEEEEEGGG-------------TTCCSSCBEEEEEEEETTTTE
T ss_pred eEEE-e--CCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-------------CCcccCCEEEEEEEEEcCCCc
Confidence 0110 0 112345677888899988 6999995 59999987432 3 788876665 4665
Q ss_pred eeEEecCEEEEcCCCCcHH
Q psy10285 465 LKTITFAICVIAAGAYSGQ 483 (673)
Q Consensus 465 ~~~i~ad~VVlAtG~~s~~ 483 (673)
..++.||.||+|||+++..
T Consensus 192 ~~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 192 VETCHAKAVVLATGGASKV 210 (540)
T ss_dssp EEEEECSEEEECCCCCGGG
T ss_pred EEEEEcCeEEECCCCcccc
Confidence 5579999999999999864
No 110
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.95 E-value=6.7e-09 Score=113.72 Aligned_cols=69 Identities=19% Similarity=0.097 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc--
Q psy10285 405 DPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS-- 481 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s-- 481 (673)
.+..++..|.+.+++.|++|+. ++|++|..++ ++|.+ |.+.+|+ +++||.||+|+|+++
T Consensus 132 ~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--------------~~v~~--V~~~~G~--~i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--------------GQTKA--VILQTGE--VLETNHVVIAVGGKSVP 193 (447)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--------------TEEEE--EEETTCC--EEECSCEEECCCCSSSG
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--------------CcEEE--EEECCCC--EEECCEEEECCCCCcCC
Confidence 3578889999999999999994 6999998765 33434 7777883 699999999999999
Q ss_pred --------HHHHHHcCCC
Q psy10285 482 --------GQVARMLKIG 491 (673)
Q Consensus 482 --------~~l~~~~g~~ 491 (673)
..++..+|+.
T Consensus 194 ~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 194 QTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp GGSCSSHHHHHHHHTTCC
T ss_pred CCCCCcHHHHHHHHCCCC
Confidence 5788888764
No 111
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.95 E-value=2.7e-08 Score=111.57 Aligned_cols=76 Identities=16% Similarity=0.070 Sum_probs=58.2
Q ss_pred eeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCC-eeEEecCEEEEcCCC
Q psy10285 402 GWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGE-LKTITFAICVIAAGA 479 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~-~~~i~ad~VVlAtG~ 479 (673)
..++...+...|.+.+++.|++++. ++|++++.+++ +++.++.+++.++. ..+++||.||.|+|.
T Consensus 115 ~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-------------~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~ 181 (535)
T 3ihg_A 115 AMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDD-------------DAGAGVTARLAGPDGEYDLRAGYLVGADGN 181 (535)
T ss_dssp BCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECG-------------GGCSEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCC-------------CccccEEEEEEcCCCeEEEEeCEEEECCCC
Confidence 3466788899999999999999995 59999998764 34445556554431 358999999999999
Q ss_pred CcHHHHHHcCCC
Q psy10285 480 YSGQVARMLKIG 491 (673)
Q Consensus 480 ~s~~l~~~~g~~ 491 (673)
++ .+.+.+|+.
T Consensus 182 ~S-~vR~~lgi~ 192 (535)
T 3ihg_A 182 RS-LVRESLGIG 192 (535)
T ss_dssp TC-HHHHHTTCC
T ss_pred cc-hHHHHcCCC
Confidence 98 677777754
No 112
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.93 E-value=7.2e-08 Score=106.98 Aligned_cols=71 Identities=20% Similarity=0.158 Sum_probs=54.5
Q ss_pred eeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCC-eeEEecCEEEEcCCCC
Q psy10285 403 WFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGE-LKTITFAICVIAAGAY 480 (673)
Q Consensus 403 ~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~-~~~i~ad~VVlAtG~~ 480 (673)
.++...+...|.+.+++.|++|+. ++|++++.+++ ++.|++.++. ..+++||.||.|.|.+
T Consensus 103 ~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-----------------~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 103 AVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGD-----------------HVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSS-----------------CEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred ecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-----------------EEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 466678889999999999999996 59999998774 4445544431 3479999999999999
Q ss_pred cHHHHHHcCCC
Q psy10285 481 SGQVARMLKIG 491 (673)
Q Consensus 481 s~~l~~~~g~~ 491 (673)
|. +-+.+|+.
T Consensus 166 S~-VR~~lg~~ 175 (499)
T 2qa2_A 166 ST-VRKAAGFD 175 (499)
T ss_dssp CH-HHHHTTCC
T ss_pred cH-HHHHcCCC
Confidence 85 65666754
No 113
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.91 E-value=1.2e-08 Score=114.85 Aligned_cols=72 Identities=21% Similarity=0.126 Sum_probs=56.9
Q ss_pred ceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEc--CCCCeeEEecCEEEEcC
Q psy10285 401 EGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRD--EKGELKTITFAICVIAA 477 (673)
Q Consensus 401 ~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t--~~G~~~~i~ad~VVlAt 477 (673)
...++...+...|.+.+++.|++|+. ++|++++.+++ ++.|++ .+|+ .+++||.||.|.
T Consensus 142 ~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~-----------------~v~v~~~~~~G~-~~~~a~~vV~AD 203 (570)
T 3fmw_A 142 TGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAE-----------------AVEVTVAGPSGP-YPVRARYGVGCD 203 (570)
T ss_dssp BBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSS-----------------CEEEEEEETTEE-EEEEESEEEECS
T ss_pred eEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-----------------eEEEEEEeCCCc-EEEEeCEEEEcC
Confidence 34577888999999999989999985 49999988764 444554 6662 489999999999
Q ss_pred CCCcHHHHHHcCCC
Q psy10285 478 GAYSGQVARMLKIG 491 (673)
Q Consensus 478 G~~s~~l~~~~g~~ 491 (673)
|.++ .+.+.+|+.
T Consensus 204 G~~S-~vR~~lGi~ 216 (570)
T 3fmw_A 204 GGRS-TVRRLAADR 216 (570)
T ss_dssp CSSC-HHHHHTTCC
T ss_pred CCCc-hHHHHcCCC
Confidence 9998 677777764
No 114
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.91 E-value=6.9e-08 Score=107.15 Aligned_cols=71 Identities=21% Similarity=0.144 Sum_probs=54.1
Q ss_pred eeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCC-eeEEecCEEEEcCCCC
Q psy10285 403 WFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGE-LKTITFAICVIAAGAY 480 (673)
Q Consensus 403 ~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~-~~~i~ad~VVlAtG~~ 480 (673)
.++...+...|.+.+++.|++++. ++|++++.+++ ++.|++.++. ..+++||.||.|.|.+
T Consensus 102 ~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-----------------~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 102 TVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA-----------------GVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT-----------------EEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred ecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC-----------------eEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 455678888899999999999986 59999998774 4555544431 3479999999999999
Q ss_pred cHHHHHHcCCC
Q psy10285 481 SGQVARMLKIG 491 (673)
Q Consensus 481 s~~l~~~~g~~ 491 (673)
|. +-+.+|+.
T Consensus 165 S~-VR~~lg~~ 174 (500)
T 2qa1_A 165 SS-VRKAAGFD 174 (500)
T ss_dssp CH-HHHHTTCC
T ss_pred hH-HHHHcCCC
Confidence 85 66667754
No 115
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.91 E-value=3.6e-08 Score=111.49 Aligned_cols=75 Identities=15% Similarity=0.154 Sum_probs=55.9
Q ss_pred eeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcC------CCCe-------eE
Q psy10285 402 GWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDE------KGEL-------KT 467 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~------~G~~-------~~ 467 (673)
..++...+...|.+.+++.|++|+. .+|+++..+++ ++|.+ |.+. +|+. .+
T Consensus 139 ~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-------------g~V~g--V~~~~~g~~~~G~~~~~~~~g~~ 203 (584)
T 2gmh_A 139 YVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHED-------------GSVKG--IATNDVGIQKDGAPKTTFERGLE 203 (584)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTT-------------SSEEE--EEECCEEECTTSCEEEEEECCCE
T ss_pred EEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-------------CCEEE--EEeCCccccCCCCcccccCCceE
Confidence 4566788999999999999999995 59999988764 45666 4443 3421 47
Q ss_pred EecCEEEEcCCCCcH---HHHHHcCCC
Q psy10285 468 ITFAICVIAAGAYSG---QVARMLKIG 491 (673)
Q Consensus 468 i~ad~VVlAtG~~s~---~l~~~~g~~ 491 (673)
++||.||+|+|.++. .+.+.+++.
T Consensus 204 i~Ad~VV~AdG~~S~vr~~l~~~~gl~ 230 (584)
T 2gmh_A 204 LHAKVTIFAEGCHGHLAKQLYKKFDLR 230 (584)
T ss_dssp EECSEEEECCCTTCHHHHHHHHHTTTT
T ss_pred EECCEEEEeeCCCchHHHHHHHHhCCC
Confidence 999999999999975 455555643
No 116
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.90 E-value=4.6e-10 Score=116.31 Aligned_cols=37 Identities=19% Similarity=0.356 Sum_probs=33.0
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+++|||||||||+||++||++|++. |++|+|||++..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~---g~~v~lie~~~~ 40 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRA---RKQIALFDNNTN 40 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT---TCCEEEEECSCC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHC---CCCEEEEeCCCC
Confidence 3469999999999999999999999 999999999753
No 117
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.90 E-value=2.2e-08 Score=106.20 Aligned_cols=34 Identities=32% Similarity=0.572 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~~ 136 (673)
++||+|||||++|+++|+.|++. |. +|+|||++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~---g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF---GITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT---TCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHc---CCCcEEEEecCC
Confidence 58999999999999999999999 88 999999985
No 118
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.90 E-value=2.3e-09 Score=118.96 Aligned_cols=40 Identities=38% Similarity=0.581 Sum_probs=33.8
Q ss_pred CCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 97 FPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 97 ~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
++.++||||||||++|+++|..|++. ..+.+|+|||++..
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~-~~g~~V~lie~~~~ 47 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRAR-DPGARVLIVSEDPE 47 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHH-STTCEEEEEESSSS
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhc-CCCCeEEEEeCCCC
Confidence 45579999999999999999999876 23679999999753
No 119
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.89 E-value=1.9e-08 Score=114.40 Aligned_cols=34 Identities=29% Similarity=0.450 Sum_probs=31.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRD 135 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~ 135 (673)
..|||+|||||++|+++|..|++. |++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~---g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKY---GAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHT---TCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhC---CCeEEEEecc
Confidence 459999999999999999999999 9999999973
No 120
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.89 E-value=4.9e-08 Score=106.48 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=32.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+++|||+|.+|+++|..++ +.|.+|+++++.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~---~~g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLY---ERGLHPTLIHRSDK 181 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHH---HHTCEEEEEESSSC
T ss_pred CcEEEEECCccchhhhHHHHH---hcCCcceeeeeecc
Confidence 468999999999999999999 88999999998776
No 121
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.88 E-value=6.1e-08 Score=104.57 Aligned_cols=61 Identities=10% Similarity=-0.096 Sum_probs=49.8
Q ss_pred eeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 402 GWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
..++...+...|.+.+.+ ++|+. ++|++++.+++ ++.|++.+|+ +++||.||.|+|.+
T Consensus 122 ~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-----------------~v~v~~~~g~--~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 122 CPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD-----------------GVTVWFTDGS--SASGDLLIAADGSH 180 (407)
T ss_dssp EEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT-----------------EEEEEETTSC--EEEESEEEECCCTT
T ss_pred EEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC-----------------cEEEEEcCCC--EEeeCEEEECCCcC
Confidence 346678888889888876 78885 59999998775 6778888884 89999999999998
Q ss_pred cHH
Q psy10285 481 SGQ 483 (673)
Q Consensus 481 s~~ 483 (673)
+..
T Consensus 181 S~v 183 (407)
T 3rp8_A 181 SAL 183 (407)
T ss_dssp CSS
T ss_pred hHH
Confidence 753
No 122
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.86 E-value=1e-08 Score=117.03 Aligned_cols=191 Identities=15% Similarity=0.139 Sum_probs=108.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccC------CCeEEEEecCCCCCCCcccccccccccccC--ceecccCcchhhHHH
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLD------GCRVAVVDRDFTVNYDLDEYARASTTLSVG--GLRQQFSLRENIEMS 314 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~------g~~v~~ie~~~~~~~~~~~~~~~st~~~~g--~i~~~~~~~~~~~~~ 314 (673)
..+||+|||+|.+|+++|+.|+ +. |.+|+||||... ..+++ ...| ++.........
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa---~~~~~~~pG~~V~vleK~~~--------~~s~s-~AqG~~gi~a~l~~ds~---- 84 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAV---RWADKYAPEAKILLVDKASL--------ERSGA-VAQGLSAINTYLGDNNA---- 84 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHH---HHHHHHCTTCCEEEECSSCT--------TTCST-TTTCEEEECCCCTTSCH----
T ss_pred EEcCEEEECCCHHHHHHHHHHH---hhccccCCCCcEEEEEecCC--------CCCcc-cccCcchheeecCCCCH----
Confidence 4589999999999999999999 55 899999999877 22333 3455 44433321111
Q ss_pred HHHHHHHHHHHhhccccCCCCCCcceeecCeEEEeccchH----HHHHHHHHHHHHcCCcceeeCHh------hHHhhCC
Q psy10285 315 LFGAEFLRNIKHHCHVIGEDEPDVNFTPNGYLFCASQDGA----ATLEKNHQLQKELGAKNVLLGPE------QLKAKFP 384 (673)
Q Consensus 315 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~l~~~~~~~~~~g~~~~~l~~~------~~~~~~p 384 (673)
..+++...... .| +..+... ......+.++...|+++...+.. .....++
T Consensus 85 ---e~~~~~~~~~~--------------~g---l~d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg 144 (662)
T 3gyx_A 85 ---DDYVRMVRTDL--------------MG---LVREDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAG 144 (662)
T ss_dssp ---HHHHHHHHHHT--------------TT---CCCHHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHT
T ss_pred ---HHHHHHHHHhc--------------CC---CccHHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhccc
Confidence 11111111100 01 1111111 11223345566778776543110 0111122
Q ss_pred CCCcccceeEEeccC--CceeeCHHHHHHHHHHHHHHc--CCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEE
Q psy10285 385 WLNTDDIALACLGLE--KEGWFDPWLYLNAVKKKAISL--GAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVR 459 (673)
Q Consensus 385 ~~~~~~~~~g~~~~~--~~g~i~~~~~~~~l~~~~~~~--Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~ 459 (673)
.+... .+..... ....+++..+...|.+.+++. |++|++ +.|++|..++++ .++|.|+.+.
T Consensus 145 ~~~~~---gg~~~~r~~~~~~~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~-----------~g~v~Gv~~~ 210 (662)
T 3gyx_A 145 KSLRN---GDKPVRSGRWQIMINGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNT-----------PNRIAGAVGF 210 (662)
T ss_dssp CCTTT---TCCBCCSSTTCEEEEETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSS-----------TTBEEEEEEE
T ss_pred ccccc---CccccccceecccCCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCc-----------cceEEEEEEE
Confidence 11111 0111000 012344567888899999887 999995 589999876520 0288897665
Q ss_pred c-CCCCeeEEecCEEEEcCCCCcHH
Q psy10285 460 D-EKGELKTITFAICVIAAGAYSGQ 483 (673)
Q Consensus 460 t-~~G~~~~i~ad~VVlAtG~~s~~ 483 (673)
. .+|+...+.|+.||+|||+++..
T Consensus 211 ~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 211 NLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp ESSSSCEEEEECSEEEECCCCBCSS
T ss_pred EcCCCcEEEEEeCEEEECCCccccc
Confidence 3 56665689999999999998753
No 123
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.86 E-value=7e-09 Score=111.83 Aligned_cols=71 Identities=20% Similarity=0.182 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc--
Q psy10285 405 DPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS-- 481 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s-- 481 (673)
++..++..|.+.+++.|++++. ++|++|..+++ +.-.++.|.+.+| +++||.||+|+|+++
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~-------------g~~~~~~v~~~~g---~i~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQN-------------DEKVRFVLQVNST---QWQCKNLIVATGGLSMP 170 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCS-------------CSSCCEEEEETTE---EEEESEEEECCCCSSCG
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccC-------------cCCCeEEEEECCC---EEECCEEEECCCCccCC
Confidence 5678889999999999999995 59999987621 0001466777766 799999999999998
Q ss_pred --------HHHHHHcCCC
Q psy10285 482 --------GQVARMLKIG 491 (673)
Q Consensus 482 --------~~l~~~~g~~ 491 (673)
..++..+|+.
T Consensus 171 ~~g~~G~g~~la~~~G~~ 188 (401)
T 2gqf_A 171 GLGATPFGYQIAEQFGIP 188 (401)
T ss_dssp GGTCCSHHHHHHHHTTCC
T ss_pred CCCCChHHHHHHHHCCCC
Confidence 4567777754
No 124
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.86 E-value=3.7e-08 Score=110.76 Aligned_cols=74 Identities=19% Similarity=0.239 Sum_probs=58.1
Q ss_pred CceeeCHHHHHHHHHHHHHHc-CCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCC
Q psy10285 400 KEGWFDPWLYLNAVKKKAISL-GAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAG 478 (673)
Q Consensus 400 ~~g~i~~~~~~~~l~~~~~~~-Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG 478 (673)
....+++..+...|.+.+++. |++++.++|++|..+++ +.+.+ |.+.+| .+++||.||+|+|
T Consensus 187 ~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~-------------g~~~~--v~~~~G--~~i~ad~vI~A~G 249 (550)
T 2e4g_A 187 YAWHFDAHLVADFLRRFATEKLGVRHVEDRVEHVQRDAN-------------GNIES--VRTATG--RVFDADLFVDCSG 249 (550)
T ss_dssp CEEEECHHHHHHHHHHHHHHHSCCEEEECCEEEEEECTT-------------SCEEE--EEETTS--CEEECSEEEECCG
T ss_pred cceEEcHHHHHHHHHHHHHhcCCcEEEECeEeEEEEcCC-------------CCEEE--EEECCC--CEEECCEEEECCC
Confidence 345689999999999999998 99999669999987654 33444 777778 3799999999999
Q ss_pred CCcHHHHHHcCC
Q psy10285 479 AYSGQVARMLKI 490 (673)
Q Consensus 479 ~~s~~l~~~~g~ 490 (673)
.++..+.+.++.
T Consensus 250 ~~S~~~~~~lg~ 261 (550)
T 2e4g_A 250 FRGLLINKAMEE 261 (550)
T ss_dssp GGCCCCCCCTCC
T ss_pred CchhhHHHHhCC
Confidence 988655544443
No 125
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.84 E-value=2.2e-08 Score=110.27 Aligned_cols=173 Identities=17% Similarity=0.110 Sum_probs=102.4
Q ss_pred cEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCCCCCCcccccccccccccCceecccCcchhhHHHHHHHHHHHHHH
Q psy10285 246 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRENIEMSLFGAEFLRNIK 325 (673)
Q Consensus 246 ~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~ 325 (673)
||+|||+|++|+++|+.|+ +.|.+|+||||. . ..+++....|++........... ....+.++.
T Consensus 1 DVvVIG~G~AGl~aA~~la---~~G~~V~viek~-~--------~~g~s~~a~Ggi~~~~~~~d~~~--~~~~d~l~~-- 64 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALR---RAGKKVTLISKR-I--------DGGSTPIAKGGVAASVGSDDSPE--LHAQDTIRV-- 64 (472)
T ss_dssp CEEEECCSHHHHHHHHHHH---HTTCCEEEECSS-T--------TCSSGGGCCSCEECCCSTTCCHH--HHHHHHHHH--
T ss_pred CEEEECCCHHHHHHHHHHH---HCCCCEEEEeCC-C--------CCchHHHHhCCeEEeCCCCCCHH--HHHHHHHHh--
Confidence 6999999999999999999 789999999999 5 24455556666654332211111 111111111
Q ss_pred hhccccCCCCCCcceeecCeEEEeccchH----HHHHHHHHHHHHcCCcceeeCHhhHHhhCCCCCcccceeEEeccCCc
Q psy10285 326 HHCHVIGEDEPDVNFTPNGYLFCASQDGA----ATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEKE 401 (673)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~l~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~g~~~~~~~ 401 (673)
.. + ..++... +.....++++...|+++... ...++.... ...++ .
T Consensus 65 --g~--------------~---~~d~~~v~~~~~~~~~~i~~l~~~Gv~~~~~-----~~~~~g~~~---~r~~~-~--- 113 (472)
T 2e5v_A 65 --GD--------------G---LCDVKTVNYVTSEAKNVIETFESWGFEFEED-----LRLEGGHTK---RRVLH-R--- 113 (472)
T ss_dssp --HT--------------T---CSCHHHHHHHHHHHHHHHHHHHHTTCCCCSS-----CBCCTTCSS---CCEEC-S---
T ss_pred --cC--------------C---cCCHHHHHHHHHHHHHHHHHHHHcCCCCCcc-----cccccCcCc---CcEEE-e---
Confidence 00 0 0011111 11223345556677654321 011111111 11111 1
Q ss_pred eeeCHHHHHHHHHHHHHHcCCeEEEe-ceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 402 GWFDPWLYLNAVKKKAISLGAEYVRG-EVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~~Gv~i~~~-~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
+...+..+...|.+.+++.|++++.. +| +|..++ ++|.++.+.+.+| ++.||.||+|||++
T Consensus 114 ~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--------------~~v~Gv~v~~~~g---~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 114 TDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKD--------------GKVTGFVTEKRGL---VEDVDKLVLATGGY 175 (472)
T ss_dssp SSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEET--------------TEEEEEEETTTEE---ECCCSEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeC--------------CEEEEEEEEeCCC---eEEeeeEEECCCCC
Confidence 22346788899999998889999964 79 998765 5677766655555 67899999999998
Q ss_pred cHH
Q psy10285 481 SGQ 483 (673)
Q Consensus 481 s~~ 483 (673)
+..
T Consensus 176 ~~~ 178 (472)
T 2e5v_A 176 SYL 178 (472)
T ss_dssp GGG
T ss_pred ccc
Confidence 764
No 126
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.84 E-value=2.3e-08 Score=113.33 Aligned_cols=190 Identities=14% Similarity=0.128 Sum_probs=106.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCC--CeEEEEecCCCCCCCcccccccccccccCceecccCcchhhHHHHHHHHHH
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDG--CRVAVVDRDFTVNYDLDEYARASTTLSVGGLRQQFSLRENIEMSLFGAEFL 321 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g--~~v~~ie~~~~~~~~~~~~~~~st~~~~g~i~~~~~~~~~~~~~~~~~~~~ 321 (673)
.+||+|||+|++|+++|+.|+ +.| .+|+||||... ..+++....|++...+.....+. ....+.+
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la---~~G~~~~V~vlEk~~~--------~~~~s~~a~GGi~~~~~~~ds~~--~~~~d~~ 71 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAA---QANPNAKIALISKVYP--------MRSHTVAAEGGSAAVAQDHDSFE--YHFHDTV 71 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHH---HHCTTCCEEEEESSCG--------GGSGGGGCCSCEECCCSTTCCHH--HHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHH---hcCCCCcEEEEeCCCC--------CCChHHHhcCccEEeCCCCCCHH--HHHHHHH
Confidence 479999999999999999999 778 99999999876 23333334455443332211111 1111111
Q ss_pred HHHHhhccccCCCCCCcceeecCeEEEeccchHHHHHHHHHHHHHcCCcceeeCHhhHH-hhCCCCCcccceeEEeccCC
Q psy10285 322 RNIKHHCHVIGEDEPDVNFTPNGYLFCASQDGAATLEKNHQLQKELGAKNVLLGPEQLK-AKFPWLNTDDIALACLGLEK 400 (673)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~~g~~~~~~ 400 (673)
+. .. .-+ ....+ ....+.....++++...|+++.......+. ..++... ....++ ..
T Consensus 72 ~~----g~------~~~---d~~~v----~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~---~~r~~~-~~- 129 (602)
T 1kf6_A 72 AG----GD------WLC---EQDVV----DYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMK---IERTWF-AA- 129 (602)
T ss_dssp HH----TT------TCS---CHHHH----HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCS---SCCEEC-ST-
T ss_pred Hh----cC------CCC---CHHHH----HHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCcc---CCeEEE-cC-
Confidence 10 00 000 00000 000111123344556677665432211100 0010000 001111 11
Q ss_pred ceeeCHHHHHHHHHHHHHHcC-CeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEc-CCCCeeEEecCEEEEcC
Q psy10285 401 EGWFDPWLYLNAVKKKAISLG-AEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRD-EKGELKTITFAICVIAA 477 (673)
Q Consensus 401 ~g~i~~~~~~~~l~~~~~~~G-v~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t-~~G~~~~i~ad~VVlAt 477 (673)
...+..++..|.+.+++.| ++++. +.|++|..++ ++|.++.+.. .+|+...+.|+.||+||
T Consensus 130 --d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~--------------g~v~Gv~~~~~~~G~~~~i~A~~VVlAt 193 (602)
T 1kf6_A 130 --DKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD--------------GHVRGLVAMNMMEGTLVQIRANAVVMAT 193 (602)
T ss_dssp --TCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEET--------------TEEEEEEEEETTTTEEEEEECSCEEECC
T ss_pred --CCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC--------------CEEEEEEEEEcCCCcEEEEEcCeEEECC
Confidence 1124688899999998888 99985 5999998765 6788876553 67754579999999999
Q ss_pred CCCcHHH
Q psy10285 478 GAYSGQV 484 (673)
Q Consensus 478 G~~s~~l 484 (673)
|+++...
T Consensus 194 Gg~s~~~ 200 (602)
T 1kf6_A 194 GGAGRVY 200 (602)
T ss_dssp CCCGGGS
T ss_pred CCCcccc
Confidence 9998753
No 127
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.82 E-value=5.2e-08 Score=108.67 Aligned_cols=73 Identities=21% Similarity=0.201 Sum_probs=56.9
Q ss_pred ceeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCC
Q psy10285 401 EGWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGA 479 (673)
Q Consensus 401 ~g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~ 479 (673)
.+......+...|.+.+++.|++++. ++|++|..++ +++.+ |.+.+|+ +++||.||+|+|.
T Consensus 214 ~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~--------------~~v~g--V~l~~G~--~i~Ad~VVlA~G~ 275 (549)
T 3nlc_A 214 IGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED--------------GQITG--VTLSNGE--EIKSRHVVLAVGH 275 (549)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESS--------------SBEEE--EEETTSC--EEECSCEEECCCT
T ss_pred cccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC--------------CEEEE--EEECCCC--EEECCEEEECCCC
Confidence 34556678899999999999999995 5999998876 34444 7778884 7999999999999
Q ss_pred CcH---HHHHHcCCC
Q psy10285 480 YSG---QVARMLKIG 491 (673)
Q Consensus 480 ~s~---~l~~~~g~~ 491 (673)
++. .++...|+.
T Consensus 276 ~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 276 SARDTFEMLHERGVY 290 (549)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred ChhhHHHHHHHcCCC
Confidence 997 345555654
No 128
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.81 E-value=2.8e-08 Score=109.55 Aligned_cols=79 Identities=6% Similarity=0.025 Sum_probs=51.3
Q ss_pred hhHHHHhHHHHHhhhccccccc--cccceeeeeccCCCCCCCceeec----CCCCCcEEEEEcc-CCccccchhHHHHHH
Q psy10285 567 YEYFNENVWPHLAHRVKAFEEL--KVSNAWAGYYDFNYFDENAIIGL----HPSYHNIHFATGF-SGHGIQQAPAIGRAV 639 (673)
Q Consensus 567 ~~~~~~~l~~~~~~~~P~l~~~--~i~~~w~G~~~~~t~d~~Piig~----~~~~~~l~~~~G~-~g~G~~~ap~~g~~v 639 (673)
.+++.+.+++.+.+++|..... .....|.+.++..+++..+.+.. ....+|++++..+ .|.|+.-|...|+.+
T Consensus 386 ~~~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv~gA~~SG~~a 465 (478)
T 2ivd_A 386 EDALAALAREELKALAGVTARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQRLPGLHLIGNAYKGVGLNDCIRNAAQL 465 (478)
T ss_dssp HHHHHHHHHHHHHHHHCCCSCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHTSTTEEECSTTTSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhhCCCEEEEccCCCCCCHHHHHHHHHHH
Confidence 3566688888899998864321 12456776554335554332221 1114789998877 477888888899999
Q ss_pred HHHHHc
Q psy10285 640 SELILD 645 (673)
Q Consensus 640 a~~i~~ 645 (673)
|+.|.+
T Consensus 466 A~~i~~ 471 (478)
T 2ivd_A 466 ADALVA 471 (478)
T ss_dssp HHHHCC
T ss_pred HHHHHH
Confidence 999874
No 129
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.81 E-value=1.6e-07 Score=98.71 Aligned_cols=78 Identities=13% Similarity=0.106 Sum_probs=48.5
Q ss_pred hhHHHHhHHHHHhhhcccccc--ccccceeeeeccCCCC-CCCceeecCCCCCcEEEEE-ccCCccccchhHHHHHHHHH
Q psy10285 567 YEYFNENVWPHLAHRVKAFEE--LKVSNAWAGYYDFNYF-DENAIIGLHPSYHNIHFAT-GFSGHGIQQAPAIGRAVSEL 642 (673)
Q Consensus 567 ~~~~~~~l~~~~~~~~P~l~~--~~i~~~w~G~~~~~t~-d~~Piig~~~~~~~l~~~~-G~~g~G~~~ap~~g~~va~~ 642 (673)
.+++.+.+++.+.++++.+.. ....++|...+|.... +....+. ....++|++|. .+.|-|+--+...|+.+|+.
T Consensus 259 ~~~~~~~~~~~l~~~~g~~~~p~~~~v~rW~~a~p~~~~~~~~~~~~-~~~~~~l~laGd~~~g~~v~~ai~sg~~aa~~ 337 (342)
T 3qj4_A 259 IEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAANCPGQMT-LHHKPFLACGGDGFTQSNFDGCITSALCVLEA 337 (342)
T ss_dssp HHHHHHHHHHHHHHHSCSCCCCSEEEEEEETTCSBSSCCSSSCSCEE-EETTTEEEECSGGGSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCceeeeccccccccccccCCCcceeE-ecCCccEEEEccccCCCCccHHHHHHHHHHHH
Confidence 466778888999999874332 1235678765443111 1111121 12357887765 46677888899999999988
Q ss_pred HHc
Q psy10285 643 ILD 645 (673)
Q Consensus 643 i~~ 645 (673)
|..
T Consensus 338 i~~ 340 (342)
T 3qj4_A 338 LKN 340 (342)
T ss_dssp HTT
T ss_pred HHh
Confidence 863
No 130
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.80 E-value=9.5e-09 Score=107.59 Aligned_cols=154 Identities=16% Similarity=0.127 Sum_probs=82.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCCCCccccccchhhcCCCcccccccCchH
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRISTSGQPTQESKVSDPHK 178 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 178 (673)
..+||+|||||++||+||++|+++ ..|++|+|+|++.. +|..... . +.......+.....
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~-r~G~~V~viEk~~~-----------~GG~~~~--~------~~~~~~~~l~~~~~ 123 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKN-RPDLKVCIIESSVA-----------PGGGSWL--G------GQLFSAMVMRKPAH 123 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH-CTTSCEEEECSSSS-----------CCTTTTC--C------STTCCCEEEETTTH
T ss_pred cCCCEEEECCCHHHHHHHHHHHHh-CCCCeEEEEECCCC-----------CCceEEe--C------CccCCHHHHHHHHH
Confidence 358999999999999999999853 12899999999764 3322211 0 11111111222223
Q ss_pred HHHHhhcccccCCccCCCceEEEeeCchhhHHHHHhhhccccccceeccCCCCcccccCCCCCCCcccEEEECCcHHHHH
Q psy10285 179 ALKETTNRYSFNDAEAPSGYVDPAKTDEHYHIKRAMRILKLDFQKLWRNVQDPESRYQGNTLFPTHVDILIIGGGAIGSS 258 (673)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~g~l~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~iiG~G~~g~~ 258 (673)
.+.+++ +.+.......+... ....+...........+............+..+... ....+++++||+|..+..
T Consensus 124 ~~~~e~----Gv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~v~viggg~~av~ 197 (326)
T 3fpz_A 124 LFLQEL----EIPYEDEGDYVVVK-HAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPT-EKGEVTVAGVVTNWTLVT 197 (326)
T ss_dssp HHHHHT----TCCCEECSSEEEES-CHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSC-SSSSCEEEEEEEEEHHHH
T ss_pred HHHHHc----CCEEEECCcceecc-eeEEEEcchhhhccccccceeecccccceeeccCCc-ccCCCEEEEEccCceeee
Confidence 333332 11211112222221 111111111222222222222222222222223222 236788999999999999
Q ss_pred HHHHHHhhccCCCeEEEEecCCC
Q psy10285 259 IAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 259 ~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.|..+. ..+.+++++.+...
T Consensus 198 ~a~~~~---~~~~~v~i~~~~~~ 217 (326)
T 3fpz_A 198 QAHGTQ---CAMDPNVIELAGYK 217 (326)
T ss_dssp TCTTSS---SCCCCEEEEESCBC
T ss_pred hhhhhh---hccCcEEEEeeccc
Confidence 999888 88899999887654
No 131
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.78 E-value=1.4e-07 Score=96.56 Aligned_cols=36 Identities=28% Similarity=0.625 Sum_probs=33.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccC-CCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLD-GCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~-g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|+.|+ +. |.+|+|+|+.+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la---~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEIS---KNPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHH---TSTTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHH---HcCCCeEEEEECCCC
Confidence 3479999999999999999999 76 999999999876
No 132
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.73 E-value=1.7e-08 Score=103.47 Aligned_cols=35 Identities=29% Similarity=0.392 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+||+|||||++|+++|+.|++. |++|+|||++..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~---g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA---RKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT---TCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC---CCCEEEEeCCCc
Confidence 38999999999999999999999 999999998753
No 133
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.73 E-value=6.9e-08 Score=107.92 Aligned_cols=74 Identities=12% Similarity=0.209 Sum_probs=56.7
Q ss_pred CceeeCHHHHHHHHHHHHHH-cCCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCC
Q psy10285 400 KEGWFDPWLYLNAVKKKAIS-LGAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAG 478 (673)
Q Consensus 400 ~~g~i~~~~~~~~l~~~~~~-~Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG 478 (673)
....+++..+...|.+.+++ .|++++.++|+++..+++ +.+.. |.+.+|+ +++||.||.|+|
T Consensus 168 ~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~-------------g~~~~--v~~~~g~--~i~ad~vV~AdG 230 (526)
T 2pyx_A 168 YGYHLNAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQH-------------GDIEK--LITKQNG--EISGQLFIDCTG 230 (526)
T ss_dssp CEEEECHHHHHHHHHHHHHHTSCCEEEECCEEEEEECTT-------------SCEEE--EEESSSC--EEECSEEEECSG
T ss_pred eeEEEcHHHHHHHHHHHHHhcCCCEEEEeEEEEEEecCC-------------CcEEE--EEECCCC--EEEcCEEEECCC
Confidence 34578899999999999999 899999768999987654 33333 6677763 699999999999
Q ss_pred CCcHHHHHHcCC
Q psy10285 479 AYSGQVARMLKI 490 (673)
Q Consensus 479 ~~s~~l~~~~g~ 490 (673)
.++..+.+.+++
T Consensus 231 ~~S~~~~~~lg~ 242 (526)
T 2pyx_A 231 AKSLLLGEHLQV 242 (526)
T ss_dssp GGCCCCCCCTCC
T ss_pred cchHHHHHHhCC
Confidence 987654444443
No 134
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.73 E-value=2.5e-08 Score=104.86 Aligned_cols=35 Identities=34% Similarity=0.759 Sum_probs=32.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.|||+|||||++|+++|+.|+++ |++|+|||++..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~---g~~v~vie~~~~ 37 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS---GLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS---SCCEEEECCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC---CCCEEEEECCCC
Confidence 48999999999999999999999 999999999854
No 135
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.72 E-value=4.5e-08 Score=108.80 Aligned_cols=59 Identities=17% Similarity=0.120 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHHHH
Q psy10285 407 WLYLNAVKKKAISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQVA 485 (673)
Q Consensus 407 ~~~~~~l~~~~~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~l~ 485 (673)
..+.++|.+.+.+.|+++. +++|++|..+++ . +++.+| .++.||+||.++- ...+.
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~-----------------~--v~~~~G--~~~~ad~vI~t~P--~~~l~ 278 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNK-----------------T--VTLQDG--TTIGYKKLVSTMA--VDFLA 278 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTT-----------------E--EEETTS--CEEEEEEEEECSC--HHHHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCC-----------------E--EEEcCC--CEEECCEEEECCC--HHHHH
Confidence 6788888888888899998 569999987663 3 567788 4899999998875 34555
Q ss_pred HHc
Q psy10285 486 RML 488 (673)
Q Consensus 486 ~~~ 488 (673)
+.+
T Consensus 279 ~~l 281 (513)
T 4gde_A 279 EAM 281 (513)
T ss_dssp HHT
T ss_pred Hhc
Confidence 544
No 136
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.71 E-value=4.2e-08 Score=112.95 Aligned_cols=36 Identities=19% Similarity=0.400 Sum_probs=33.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||||||||++|+++|+.|++. |++|+|||++..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~---g~~V~lie~~~~ 407 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR---GHQVTLFDAHSE 407 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT---TCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC---CCeEEEEeCCCC
Confidence 458999999999999999999999 999999999753
No 137
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.65 E-value=2e-07 Score=106.55 Aligned_cols=69 Identities=13% Similarity=0.121 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHHHc-CC-eEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEc-CCCCeeEEecCEEEEcCCCC
Q psy10285 405 DPWLYLNAVKKKAISL-GA-EYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRD-EKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~-Gv-~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t-~~G~~~~i~ad~VVlAtG~~ 480 (673)
++..+...|.+.+++. |+ +|+. +.|++|..++++ .++|.|+.+.. .+|+...+.|+.||+|||++
T Consensus 149 ~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~-----------~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 149 HGESYKPIIAEAAKMAVGEENIYERVFIFELLKDNND-----------PNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp EETTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTC-----------TTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred CcHHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCc-----------cceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 3445677788888887 99 9995 699999876510 02888876643 56654579999999999999
Q ss_pred cHHH
Q psy10285 481 SGQV 484 (673)
Q Consensus 481 s~~l 484 (673)
+...
T Consensus 218 ~~~y 221 (643)
T 1jnr_A 218 TLLF 221 (643)
T ss_dssp CSSS
T ss_pred cccc
Confidence 8643
No 138
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.65 E-value=1.4e-08 Score=106.57 Aligned_cols=38 Identities=18% Similarity=0.278 Sum_probs=33.8
Q ss_pred CCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 97 FPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 97 ~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
++..+||+|||||++|+++|+.|++. |++|+|||+...
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~---g~~v~lie~~~~ 48 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARA---QLAPLVFEGTSF 48 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHT---TCCCEEECCSSC
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhC---CCeEEEEecCCC
Confidence 34568999999999999999999999 999999998643
No 139
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.64 E-value=6e-07 Score=100.83 Aligned_cols=68 Identities=15% Similarity=0.112 Sum_probs=49.0
Q ss_pred eeCHHHHHHHHHHHHHHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcC---CCCeeEEecCEEEEcCC
Q psy10285 403 WFDPWLYLNAVKKKAISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDE---KGELKTITFAICVIAAG 478 (673)
Q Consensus 403 ~i~~~~~~~~l~~~~~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~---~G~~~~i~ad~VVlAtG 478 (673)
.++...+...|.+.+.+. ++ .++|++++.+++ ++.+++. +|+..+++||.||.|+|
T Consensus 134 ~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~-----------------~v~v~~~~~~~G~~~~i~a~~vVgADG 193 (549)
T 2r0c_A 134 ICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDD-----------------HVRATITDLRTGATRAVHARYLVACDG 193 (549)
T ss_dssp ECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSS-----------------CEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred ccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCC-----------------EEEEEEEECCCCCEEEEEeCEEEECCC
Confidence 455567777888888766 66 459999988764 3444433 36445899999999999
Q ss_pred CCcHHHHHHcCCC
Q psy10285 479 AYSGQVARMLKIG 491 (673)
Q Consensus 479 ~~s~~l~~~~g~~ 491 (673)
.++. +-+.+|+.
T Consensus 194 ~~S~-vR~~lg~~ 205 (549)
T 2r0c_A 194 ASSP-TRKALGID 205 (549)
T ss_dssp TTCH-HHHHHTCC
T ss_pred CCcH-HHHHcCCC
Confidence 9986 66667754
No 140
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.61 E-value=2.2e-07 Score=104.60 Aligned_cols=62 Identities=18% Similarity=0.188 Sum_probs=51.1
Q ss_pred eeeCHHHHHHHHHHHHHH-cCCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 402 GWFDPWLYLNAVKKKAIS-LGAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~-~Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
..++...+...|.+.+++ .|+++++++|++|..++ ++|.+ |.+.+| .+++||.||+|||.+
T Consensus 119 ~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~--------------g~V~G--V~t~dG--~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 119 AQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVEN--------------DRVVG--AVTQMG--LKFRAKAVVLTVGTF 180 (651)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESS--------------SBEEE--EEETTS--EEEEEEEEEECCSTT
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecC--------------CEEEE--EEECCC--CEEECCEEEEcCCCC
Confidence 357788899999999988 69999888999998765 45656 677778 589999999999997
Q ss_pred c
Q psy10285 481 S 481 (673)
Q Consensus 481 s 481 (673)
+
T Consensus 181 s 181 (651)
T 3ces_A 181 L 181 (651)
T ss_dssp T
T ss_pred c
Confidence 4
No 141
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.61 E-value=6e-07 Score=84.97 Aligned_cols=65 Identities=17% Similarity=0.118 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHHHcCCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHHH
Q psy10285 405 DPWLYLNAVKKKAISLGAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQV 484 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~l 484 (673)
.+..+...+.+.+++.|++++.++|++++.+++ ++.|.+.+| ++++|.||+|+|..+ .+
T Consensus 54 ~~~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~-----------------~~~v~~~~g---~i~ad~vI~A~G~~~-~~ 112 (180)
T 2ywl_A 54 SGEELLRRLEAHARRYGAEVRPGVVKGVRDMGG-----------------VFEVETEEG---VEKAERLLLCTHKDP-TL 112 (180)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEECCCCEEEECSS-----------------SEEEECSSC---EEEEEEEEECCTTCC-HH
T ss_pred CHHHHHHHHHHHHHHcCCEEEeCEEEEEEEcCC-----------------EEEEEECCC---EEEECEEEECCCCCC-Cc
Confidence 345677888888999999999559999987654 466888877 799999999999987 45
Q ss_pred HHHcCC
Q psy10285 485 ARMLKI 490 (673)
Q Consensus 485 ~~~~g~ 490 (673)
++.+++
T Consensus 113 ~~~~g~ 118 (180)
T 2ywl_A 113 PSLLGL 118 (180)
T ss_dssp HHHHTC
T ss_pred cccCCC
Confidence 565553
No 142
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.61 E-value=7.4e-08 Score=105.92 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+++|+|||+|.+|+.+|..|+ +.|.+|+++++++.
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~---~~g~~V~li~~~~~ 231 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCY---KYGAKKLISCYRTA 231 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHH---HTTCSEEEEECSSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHH---HhCCeEEEEEECCC
Confidence 4688999999999999999999 88999999998765
No 143
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.61 E-value=2.5e-07 Score=103.71 Aligned_cols=61 Identities=23% Similarity=0.231 Sum_probs=50.6
Q ss_pred eeCHHHHHHHHHHHHHH-cCCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 403 WFDPWLYLNAVKKKAIS-LGAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 403 ~i~~~~~~~~l~~~~~~-~Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
.++...+...|.+.+++ .|+++++++|++|..++ ++|.+ |.+.+| .++.||.||+|||+++
T Consensus 119 ~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~--------------g~V~G--V~t~dG--~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 119 QADKKRYREYMKKVCENQENLYIKQEEVVDIIVKN--------------NQVVG--VRTNLG--VEYKTKAVVVTTGTFL 180 (637)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESS--------------SBEEE--EEETTS--CEEECSEEEECCTTCB
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecC--------------CEEEE--EEECCC--cEEEeCEEEEccCCCc
Confidence 56778899999999988 59999888999998766 45666 677788 4899999999999874
No 144
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.60 E-value=1.9e-07 Score=99.93 Aligned_cols=35 Identities=26% Similarity=0.227 Sum_probs=32.6
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++|+|||+|.+|+++|..|+ +.|.+|+++++.+.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~---~~g~~Vtvv~~~~~ 180 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAII---DSGTPASIGIILEY 180 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHH---HHTCCEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH---hCCCeEEEEEcCCc
Confidence 578999999999999999999 78999999999876
No 145
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.60 E-value=1.4e-07 Score=105.97 Aligned_cols=66 Identities=17% Similarity=0.112 Sum_probs=48.8
Q ss_pred HHHHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecC-EEEEcCCCC-cHHHHHHcCCC
Q psy10285 416 KAISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFA-ICVIAAGAY-SGQVARMLKIG 491 (673)
Q Consensus 416 ~~~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad-~VVlAtG~~-s~~l~~~~g~~ 491 (673)
.+++.|++|+ ++.|++|..+.++ ..++++||.+...+|+..+++|+ -||+|+|++ +++||...||.
T Consensus 236 ~~~r~NL~V~t~a~V~rIl~d~~~----------~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIG 304 (583)
T 3qvp_A 236 NYQRPNLQVLTGQYVGKVLLSQNG----------TTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIG 304 (583)
T ss_dssp TTTCTTEEEECSCEEEEEEEECSS----------SSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBS
T ss_pred hhcCCCcEEEcCCEEEEEEeccCC----------CCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCC
Confidence 3345689999 4699999887310 01689998877667877789997 599999977 78888776654
No 146
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.58 E-value=2.5e-06 Score=97.48 Aligned_cols=77 Identities=14% Similarity=0.069 Sum_probs=54.2
Q ss_pred eeCHHHHHHHHHHHHHHcCC--eEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEc----CCCCeeEEecCEEEE
Q psy10285 403 WFDPWLYLNAVKKKAISLGA--EYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRD----EKGELKTITFAICVI 475 (673)
Q Consensus 403 ~i~~~~~~~~l~~~~~~~Gv--~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t----~~G~~~~i~ad~VVl 475 (673)
.++...+...|.+.+++.|+ +++. ++|++++.++++ .+....+.+.+ .+|+..+++||.||.
T Consensus 137 ~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~-----------~~~~v~v~~~~~~~~~~G~~~~i~a~~vVg 205 (639)
T 2dkh_A 137 ILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGA-----------ADYPVTVTLERCDAAHAGQIETVQARYVVG 205 (639)
T ss_dssp ECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTC-----------SSCCEEEEEEECSGGGTTCEEEEEEEEEEE
T ss_pred eeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCC-----------CcCCEEEEEEeccccCCCCeEEEEeCEEEE
Confidence 46677888999999999987 8885 599999876520 01112333333 256546899999999
Q ss_pred cCCCCcHHHHHHcCCC
Q psy10285 476 AAGAYSGQVARMLKIG 491 (673)
Q Consensus 476 AtG~~s~~l~~~~g~~ 491 (673)
|.|+++. +-+.+|+.
T Consensus 206 ADG~~S~-vR~~lg~~ 220 (639)
T 2dkh_A 206 CDGARSN-VRRAIGRQ 220 (639)
T ss_dssp CCCTTCH-HHHHTTCC
T ss_pred CCCcchH-HHHHhCCC
Confidence 9999986 66667754
No 147
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.57 E-value=2.9e-07 Score=98.89 Aligned_cols=70 Identities=20% Similarity=0.012 Sum_probs=56.8
Q ss_pred eeeCHHHHHHHHHHHHHHc-CCeEEE-eceeEEEecCCccccccCCCCCCccceeeE--EEEcCCCCeeEEecCEEEEcC
Q psy10285 402 GWFDPWLYLNAVKKKAISL-GAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNEC--VVRDEKGELKTITFAICVIAA 477 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~~-Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv--~V~t~~G~~~~i~ad~VVlAt 477 (673)
..++...+...|.+.+++. |++++. ++|++++.+++ ++ .|++.+|+ +++||.||.|+
T Consensus 102 ~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~-----------------~v~g~v~~~~g~--~~~ad~vV~Ad 162 (399)
T 2x3n_A 102 ILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDER-----------------HAIDQVRLNDGR--VLRPRVVVGAD 162 (399)
T ss_dssp EECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTT-----------------SCEEEEEETTSC--EEEEEEEEECC
T ss_pred ccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC-----------------ceEEEEEECCCC--EEECCEEEECC
Confidence 3577889999999999988 999985 59999988764 44 57788884 89999999999
Q ss_pred CCCcHHHHHHcCCC
Q psy10285 478 GAYSGQVARMLKIG 491 (673)
Q Consensus 478 G~~s~~l~~~~g~~ 491 (673)
|.++. +.+.+++.
T Consensus 163 G~~s~-vr~~lg~~ 175 (399)
T 2x3n_A 163 GIASY-VRRRLLDI 175 (399)
T ss_dssp CTTCH-HHHHTSCC
T ss_pred CCChH-HHHHhCCC
Confidence 99987 55666653
No 148
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.56 E-value=9.5e-08 Score=102.69 Aligned_cols=100 Identities=20% Similarity=0.254 Sum_probs=70.2
Q ss_pred CccccEEEECCChHHHHHHHHHHH-hcCCC-ceEEEEecccccccCcCCCCCCCCCCCccccccchhhcCCCcccccccC
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKE-KVLDG-CRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRISTSGQPTQESKVSD 175 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~-~~~~g-~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 175 (673)
+.++||||||||++|+++|++|++ . | ++|+|||++.. +.+++..+.+.+...........+..
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~---G~~~V~vlE~~~~------------~~gas~~~~g~~~~~~~~~~~~~l~~ 83 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNH---GITNVAVLEKGWL------------AGGNMARNTTIIRSNYLWDESAGIYE 83 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHH---CCCCEEEECSSST------------TCSGGGTSCCCBCCCCSSHHHHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhc---CCCcEEEEeCCCC------------CCCcccccCceeeecCCCHHHHHHHH
Confidence 456999999999999999999999 9 9 99999999864 55566656665544333322233444
Q ss_pred chHHHHHhhcccccCCcc-CCCceEEEeeCchhhHHHH
Q psy10285 176 PHKALKETTNRYSFNDAE-APSGYVDPAKTDEHYHIKR 212 (673)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~-~~~g~l~v~~~~~~~~~~~ 212 (673)
.+...|+.+.+..+.++. ...+.+.+...+...+...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 121 (405)
T 2gag_B 84 KSLKLWEQLPEDLEYDFLFSQRGVLNLAHTLGDVRESV 121 (405)
T ss_dssp HHHHHHHHHHHHTTCCCCCBCCCEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCEecccEEEEEcCHHHHHHHH
Confidence 556667766555555555 7788998887765544443
No 149
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.55 E-value=4.3e-07 Score=95.31 Aligned_cols=59 Identities=10% Similarity=-0.014 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEE-EEcCCCCeeEEecCEEEEcCCCCcH
Q psy10285 405 DPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECV-VRDEKGELKTITFAICVIAAGAYSG 482 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~-V~t~~G~~~~i~ad~VVlAtG~~s~ 482 (673)
....+...+.+.+++.|++++. ++|+++..+++ .+. |.+.+| ++++|.||+|+|.++.
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-----------------~~~~v~~~~g---~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 74 ARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGE-----------------RLRVVARDGR---QWLARAVISATGTWGE 133 (357)
T ss_dssp BHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETT-----------------EEEEEETTSC---EEEEEEEEECCCSGGG
T ss_pred CHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCC-----------------cEEEEEeCCC---EEEeCEEEECCCCCCC
Confidence 3467777888888889999985 59999998764 577 888887 8999999999998764
Q ss_pred H
Q psy10285 483 Q 483 (673)
Q Consensus 483 ~ 483 (673)
.
T Consensus 134 ~ 134 (357)
T 4a9w_A 134 A 134 (357)
T ss_dssp B
T ss_pred C
Confidence 3
No 150
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.55 E-value=2.3e-07 Score=102.89 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+..|||||||++|+++|..|++. +.+|+|||++..
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~---~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTK---KYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTT---TCEEEEEESSSE
T ss_pred CCCEEEECCcHHHHHHHHHhhhC---CCcEEEECCCCC
Confidence 35799999999999999999988 899999999764
No 151
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.54 E-value=6.7e-07 Score=96.46 Aligned_cols=58 Identities=22% Similarity=0.206 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHHHHH
Q psy10285 408 LYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQVAR 486 (673)
Q Consensus 408 ~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~l~~ 486 (673)
.+...+.+.+++.||+++. ++|++++.+ + |.+.+|+ ++.+|.||+|+|.....++.
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~-------------------~--v~~~~g~--~~~~D~vi~a~G~~~~~~l~ 275 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIREH-------------------E--IVDEKGN--TIPADITILLPPYTGNPALK 275 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECSS-------------------E--EEETTSC--EEECSEEEEECCEECCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECCC-------------------e--EEECCCC--EEeeeEEEECCCCCccHHHH
Confidence 4556677777888999995 589888642 3 6667784 89999999999987766665
Q ss_pred Hc
Q psy10285 487 ML 488 (673)
Q Consensus 487 ~~ 488 (673)
.+
T Consensus 276 ~~ 277 (409)
T 3h8l_A 276 NS 277 (409)
T ss_dssp TS
T ss_pred hc
Confidence 44
No 152
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.54 E-value=4e-07 Score=99.66 Aligned_cols=36 Identities=31% Similarity=0.383 Sum_probs=33.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||+|||||++|+++|+.|++. |++|+|+|+...
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~---G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK---GYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH---TCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCeEEEEeccCC
Confidence 458999999999999999999999 999999999753
No 153
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.53 E-value=9.1e-08 Score=102.09 Aligned_cols=97 Identities=21% Similarity=0.277 Sum_probs=66.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCCCCccccccchhhcCCCcccccccCchH
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRISTSGQPTQESKVSDPHK 178 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 178 (673)
.++||||||||++|+++|++|+++ |++|+|||++.. +.++|..+.+.+...........+...+.
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~---G~~V~lle~~~~------------~~gas~~~~g~~~~~~~~~~~~~l~~~~~ 68 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKR---GEEVTVIEKRFI------------GSGSTFRCGTGIRQQFNDEANVRVMKRSV 68 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT---TCCEEEECSSST------------TCSHHHHCCCCCCCCCSSHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC---CCeEEEEeCCCC------------CCCccccccCeeeecCCChHHHHHHHHHH
Confidence 468999999999999999999999 999999999853 55566556665544333222233445566
Q ss_pred HHHHhhcccccCCcc-CCCceEEEeeCchhhHHHH
Q psy10285 179 ALKETTNRYSFNDAE-APSGYVDPAKTDEHYHIKR 212 (673)
Q Consensus 179 ~~~~~~~~~~~~~~~-~~~g~l~v~~~~~~~~~~~ 212 (673)
..|+.+.+..+. . ...+.+.+..+++..+...
T Consensus 69 ~~~~~l~~~~~~--~~~~~g~l~~~~~~~~~~~~~ 101 (382)
T 1y56_B 69 ELWKKYSEEYGF--SFKQTGYLFLLYDDEEVKTFK 101 (382)
T ss_dssp HHHHHHHHHHTC--CEECCCEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHhCC--CeeccceEEEEeCHHHHHHHH
Confidence 677766544333 4 6778888887765544443
No 154
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.52 E-value=1.9e-07 Score=102.09 Aligned_cols=36 Identities=8% Similarity=0.080 Sum_probs=33.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCe-EEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCR-VAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~-v~~ie~~~~ 281 (673)
.+++|+|||+|.+|+.+|..|+ ..+.+ |+++++++.
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~---~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLT---PVAKHPIYQSLLGGG 247 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHT---TTSCSSEEEECTTCC
T ss_pred CCCEEEEEccCcCHHHHHHHHH---HHhCCcEEEEeCCCC
Confidence 4688999999999999999999 88888 999998877
No 155
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.51 E-value=3.8e-07 Score=102.61 Aligned_cols=64 Identities=13% Similarity=0.179 Sum_probs=51.4
Q ss_pred eeeCHHHHHHHHHHHHHHc-CCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 402 GWFDPWLYLNAVKKKAISL-GAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~~-Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
..++...+...+.+.+++. |+++++++|+.+..++ ++|.+ |.+.+| .++.||.||+|||+|
T Consensus 112 ~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~--------------g~V~G--V~t~~G--~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 112 AQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANS--------------GKFSS--VTVRSG--RAIQAKAAILACGTF 173 (641)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEET--------------TEEEE--EEETTS--CEEEEEEEEECCTTC
T ss_pred hhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecC--------------CEEEE--EEECCC--cEEEeCEEEECcCCC
Confidence 3577888889999988874 9999888999998766 45555 667778 489999999999988
Q ss_pred cHH
Q psy10285 481 SGQ 483 (673)
Q Consensus 481 s~~ 483 (673)
+..
T Consensus 174 s~~ 176 (641)
T 3cp8_A 174 LNG 176 (641)
T ss_dssp BTC
T ss_pred CCc
Confidence 553
No 156
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.48 E-value=9.8e-08 Score=101.76 Aligned_cols=101 Identities=20% Similarity=0.270 Sum_probs=64.2
Q ss_pred CCCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCCCCccccccchhhcCC---Cccccc
Q psy10285 96 LFPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRISTSGQ---PTQESK 172 (673)
Q Consensus 96 ~~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~---~~~~~~ 172 (673)
..+..+||||||||++|+++|++|++. |++|+|||++.. +.+++..+.+.+..... ......
T Consensus 13 ~~~~~~dvvIIGgG~~Gl~~A~~La~~---G~~V~llE~~~~------------~~g~s~~~~g~~~~~~~~~~~~~~~~ 77 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGIIGSAIAYYLAKE---NKNTALFESGTM------------GGRTTSAAAGMLGAHAECEERDAFFD 77 (382)
T ss_dssp -CCSEEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSST------------TTTHHHHCCCBCCGGGSCSSCSHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHhC---CCcEEEEeCCCC------------CcccchhcCceeccCccCCCCcHHHH
Confidence 344569999999999999999999999 999999999864 44555555555543221 111222
Q ss_pred ccCchHHHHHhhccc----ccCCcc-CCCceEEEeeCchhhHHH
Q psy10285 173 VSDPHKALKETTNRY----SFNDAE-APSGYVDPAKTDEHYHIK 211 (673)
Q Consensus 173 ~~~~~~~~~~~~~~~----~~~~~~-~~~g~l~v~~~~~~~~~~ 211 (673)
+...+.+.|+.+.+. .+..+. ...+.+.++..+...+.+
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 121 (382)
T 1ryi_A 78 FAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQL 121 (382)
T ss_dssp HHHHHHHHTTTHHHHHHHHHCCCCCCBCCCEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcCeeecceEEEEeCHHHHHHH
Confidence 333444444443222 244555 678888888776554433
No 157
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.48 E-value=7.8e-07 Score=92.03 Aligned_cols=58 Identities=12% Similarity=0.126 Sum_probs=46.0
Q ss_pred eCHHHHHHHHHHHHHHcCCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 404 FDPWLYLNAVKKKAISLGAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 404 i~~~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
+.+..+...+.+.+++.|++++.++|+++..+++ .+.|.+.+| .++.+|.||+|+|..
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~-----------------~~~v~~~~g--~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 67 IQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGD-----------------EFVVKTKRK--GEFKADSVILGIGVK 124 (323)
T ss_dssp EEHHHHHHHHHHHHHTTTCCEEESCEEEEEEC-------------------CEEEEESSS--CEEEEEEEEECCCCE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEEEEEEEEecCC-----------------EEEEEECCC--CEEEcCEEEECcCCC
Confidence 3446677778888888899988889999987764 566888887 389999999999987
No 158
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.47 E-value=3.6e-07 Score=106.04 Aligned_cols=36 Identities=31% Similarity=0.462 Sum_probs=33.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||+|||||++|+++|+.|+++ |++|+|||+...
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~---G~~Vtlie~~~~ 423 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES---GYTVHLTDTAEK 423 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC---CCeEEEEeCCCC
Confidence 458999999999999999999999 999999999753
No 159
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.46 E-value=2.2e-06 Score=89.28 Aligned_cols=36 Identities=31% Similarity=0.579 Sum_probs=32.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccC--CCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLD--GCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~--g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+.+|+.|+ +. |.+|+|+|+...
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La---~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLS---TLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHH---HHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHH---hcCCCCEEEEEeCCCc
Confidence 3479999999999999999999 54 999999999876
No 160
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.45 E-value=1.9e-06 Score=94.31 Aligned_cols=59 Identities=8% Similarity=0.134 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHcCCeEE-EeceeEEEec--CCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHH
Q psy10285 407 WLYLNAVKKKAISLGAEYV-RGEVVDFLRR--RNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQ 483 (673)
Q Consensus 407 ~~~~~~l~~~~~~~Gv~i~-~~~V~~i~~~--~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~ 483 (673)
..+.++|.+.+++.|++|+ +++|++|..+ + +++.+ |.+. | .+++||.||+|+|.|+..
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~--------------~~~~~--V~~~-g--~~~~ad~VV~a~~~~~~~ 302 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT--------------GKFEG--VKTK-L--GTFKAPLVIADPTYFPEK 302 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTT--------------TEEEE--EEET-T--EEEECSCEEECGGGCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCC--------------CeEEE--EEEC-C--eEEECCEEEECCCccchh
Confidence 5889999999999999999 4699999877 4 45555 5554 5 489999999999999765
Q ss_pred H
Q psy10285 484 V 484 (673)
Q Consensus 484 l 484 (673)
+
T Consensus 303 l 303 (453)
T 2bcg_G 303 C 303 (453)
T ss_dssp E
T ss_pred h
Confidence 4
No 161
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.43 E-value=2.1e-07 Score=98.87 Aligned_cols=92 Identities=20% Similarity=0.309 Sum_probs=64.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCCCCccccccchhhcCCCcccccccCchH
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRISTSGQPTQESKVSDPHK 178 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 178 (673)
..+||||||||++|+++|++|+ + |++|+|||++.. ++.++++.+.+.+...........+...+.
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~---G~~V~vlE~~~~-----------~g~~as~~~~g~~~~~~~~~~~~~l~~~~~ 72 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A---HGRVVVLEREAQ-----------PGYHSTGRSAAHYTVAYGTPQVRALTAASR 72 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T---TSCEEEECSSSS-----------TTSSGGGSCCCEECSSSSCHHHHHHHHHHH
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C---CCCEEEEECCCC-----------ccccccccccceeecccCCHHHHHHHHHHH
Confidence 4589999999999999999999 6 999999999853 355667667666654433333344555666
Q ss_pred HHHHhhcccccCCcc-CCCceEEEeeCc
Q psy10285 179 ALKETTNRYSFNDAE-APSGYVDPAKTD 205 (673)
Q Consensus 179 ~~~~~~~~~~~~~~~-~~~g~l~v~~~~ 205 (673)
++|+.+.+....... ...+.+.+...+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 100 (381)
T 3nyc_A 73 AFFDNPPAGFCEHPLLSPRPEMVVDFSD 100 (381)
T ss_dssp HHHHSCCTTSCSSCSEEECCEEEECSSC
T ss_pred HHHHHhhhhhCCcccccccceEEEechH
Confidence 777766543322223 567888887654
No 162
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.43 E-value=1.4e-06 Score=89.09 Aligned_cols=57 Identities=19% Similarity=0.251 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHc-CCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 406 PWLYLNAVKKKAISL-GAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 406 ~~~~~~~l~~~~~~~-Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
+..+...+.+.+.+. ++++++++|+.+..+++ ++.|.+.+| .++.+|.||+|+|...
T Consensus 55 ~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~-----------------~~~v~~~~g--~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 55 PGEIIAEARRQIERYPTIHWVEGRVTDAKGSFG-----------------EFIVEIDGG--RRETAGRLILAMGVTD 112 (297)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEESCEEEEEEETT-----------------EEEEEETTS--CEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCC-----------------eEEEEECCC--CEEEcCEEEECCCCCC
Confidence 355666666777665 67887889999988764 577888888 3799999999999853
No 163
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.43 E-value=4.9e-07 Score=100.10 Aligned_cols=56 Identities=16% Similarity=0.148 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHcC-CeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 407 WLYLNAVKKKAISLG-AEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 407 ~~~~~~l~~~~~~~G-v~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
..++..|.+.+.+.| ++|+ +++|++|...++ ++.|.+.+|+ +++||+||+|+|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~-----------------~v~v~~~~g~--~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERD-----------------AARVTARDGR--EFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSS-----------------SEEEEETTCC--EEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC-----------------EEEEEECCCC--EEEcCEEEECCCHHH
Confidence 578888999998888 8998 569999987664 5668888883 799999999999753
No 164
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.42 E-value=2.5e-06 Score=84.48 Aligned_cols=62 Identities=19% Similarity=0.238 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHHHc-CCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHH
Q psy10285 405 DPWLYLNAVKKKAISL-GAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQ 483 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~-Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~ 483 (673)
++..+...|.+.+++. |+++++++|+++..++ +++.+ |.+.+|+ +++||.||+|+|.++..
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~--------------~~v~~--v~~~~g~--~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLFQATATGLLLEG--------------NRVVG--VRTWEGP--PARGEKVVLAVGSFLGA 127 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEET--------------TEEEE--EEETTSC--CEECSEEEECCTTCSSC
T ss_pred CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeC--------------CEEEE--EEECCCC--EEECCEEEECCCCChhh
Confidence 4567788888889887 9999877999998765 33434 6777773 79999999999997654
Q ss_pred H
Q psy10285 484 V 484 (673)
Q Consensus 484 l 484 (673)
.
T Consensus 128 ~ 128 (232)
T 2cul_A 128 R 128 (232)
T ss_dssp E
T ss_pred c
Confidence 3
No 165
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.41 E-value=2.3e-07 Score=99.57 Aligned_cols=92 Identities=18% Similarity=0.212 Sum_probs=56.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCC--CCccccccchhhcCCCcccccccCc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGD--QESSNDKDRISTSGQPTQESKVSDP 176 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~~~~~~~~~ 176 (673)
..+||||||||++|+++|++|+++ |++|+|||+... +. +++..+.+.+...........+...
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~---G~~V~vlE~~~~------------~~~~gas~~~~~~~~~~~~~~~~~~~~~~ 67 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAER---GHRVLVLERHTF------------FNENGGTSGAERHWRLQYTQEDLFRLTLE 67 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSCT------------TCSSSSCCSSEEEECSCCSSHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC---CCeEEEEeCCCC------------CCCCCCCCCcCeEEEeccCcchhhhHHHH
Confidence 358999999999999999999999 999999999864 22 3333333333221111111223344
Q ss_pred hHHHHHhhcccccCCccCCCceEEEeeCc
Q psy10285 177 HKALKETTNRYSFNDAEAPSGYVDPAKTD 205 (673)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~g~l~v~~~~ 205 (673)
+...|+.+.+..........|.+.+...+
T Consensus 68 ~~~~~~~l~~~~~~~~~~~~g~l~~~~~~ 96 (397)
T 2oln_A 68 TLPLWRALESRCERRLIHEIGSLWFGDTD 96 (397)
T ss_dssp HHHHHHHHHHHHTCCCEECCCEEEEECSS
T ss_pred HHHHHHHHHHHhCccHHHHCCcEEEcCCC
Confidence 55666665443333322556777666543
No 166
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.40 E-value=1.5e-06 Score=90.78 Aligned_cols=35 Identities=34% Similarity=0.423 Sum_probs=32.6
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||||++|+++|+.|+ +.|.+|+|+||.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~---~~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALT---AAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHH---HTTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHH---HCCCcEEEEECCCC
Confidence 368999999999999999999 88999999999876
No 167
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.40 E-value=1.4e-06 Score=95.15 Aligned_cols=57 Identities=14% Similarity=0.182 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 407 WLYLNAVKKKAISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 407 ~~~~~~l~~~~~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
..+.++|.+.+++.|++|+ +++|++|..+++ +++.+ |++.+|+ +++||.||+|++.+
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~-------------g~v~g--V~~~~G~--~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDD-------------NKVCG--IKSSDGE--IAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTT-------------SCEEE--EEETTSC--EEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecC-------------CeEEE--EEECCCc--EEECCEEEECCCcc
Confidence 6889999999999999999 569999998433 56666 7888884 79999999999976
No 168
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.40 E-value=1.8e-06 Score=92.44 Aligned_cols=69 Identities=12% Similarity=0.002 Sum_probs=49.6
Q ss_pred eCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEc-CCCCeeEEecCEEEEcCCCCc
Q psy10285 404 FDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRD-EKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 404 i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t-~~G~~~~i~ad~VVlAtG~~s 481 (673)
++...+...|.+.+.+.|++++. ++|++++.+++ + ++.|++ .+|+..+++||.||.|+|.++
T Consensus 100 ~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-------------~---~~~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 100 YGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQG-------------E---RPYVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTS-------------S---SCEEEEEETTEEEEEECSEEEECCCTTC
T ss_pred echHHHHHHHHHHHHhcCCeEEeceeEEEEEEecC-------------C---ceEEEEecCCcEEEEEeCEEEECCCCCc
Confidence 34567778888888888999995 59999987642 1 233554 577434799999999999987
Q ss_pred HHHHHHcC
Q psy10285 482 GQVARMLK 489 (673)
Q Consensus 482 ~~l~~~~g 489 (673)
. +-+.++
T Consensus 164 ~-vr~~l~ 170 (394)
T 1k0i_A 164 I-SRQSIP 170 (394)
T ss_dssp S-TGGGSC
T ss_pred H-HHHhcC
Confidence 6 434443
No 169
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.40 E-value=4e-06 Score=89.33 Aligned_cols=65 Identities=20% Similarity=0.125 Sum_probs=52.1
Q ss_pred eeeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 402 GWFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 402 g~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
..++...+...|.+.+.+.|++++. ++|++++. + + .|++.+|+ +++||.||.|+|.+
T Consensus 102 ~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~------------------~-~v~~~~g~--~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 102 RIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V------------------G-RLTLQTGE--VLEADLIVGADGVG 159 (379)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T------------------T-EEEETTSC--EEECSEEEECCCTT
T ss_pred EEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C------------------C-EEEECCCC--EEEcCEEEECCCcc
Confidence 4567788999999999999999995 58999986 3 3 47777784 79999999999998
Q ss_pred cHHHHHHcC
Q psy10285 481 SGQVARMLK 489 (673)
Q Consensus 481 s~~l~~~~g 489 (673)
+. +.+.++
T Consensus 160 s~-vr~~l~ 167 (379)
T 3alj_A 160 SK-VRDSIG 167 (379)
T ss_dssp CH-HHHHHC
T ss_pred HH-HHHHhc
Confidence 85 445554
No 170
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.36 E-value=3.7e-07 Score=99.68 Aligned_cols=96 Identities=26% Similarity=0.335 Sum_probs=65.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCC-ceEEEEec-ccccccCcCCCCCCCCCCCccccccchhhcCCCcccccccCc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDG-CRVAVVDR-DFTVNYDLDEDGSNPGDQESSNDKDRISTSGQPTQESKVSDP 176 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g-~~v~vie~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 176 (673)
.++||||||||++|+++|++|+++ | ++|+|||+ .. ++.+++..+.+.+...........+...
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~---G~~~V~vlE~~~~------------~~~g~S~~~~g~i~~~~~~~~~~~l~~~ 86 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVW---SGGSVLVVDAGHA------------PGSGDSGRSMAAFRTFFSSTMNRLVAGS 86 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH---HCSCEEEEESSSS------------TTCSGGGSSCCEEECCCSSHHHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC---CCCcEEEEccCCC------------CCCCcccCCCcEecccCCCHHHHHHHHH
Confidence 468999999999999999999999 8 99999999 54 3555666666665543333223334455
Q ss_pred hHHHHHhhcccccCCcc-CCCceEEEeeCchhhHHH
Q psy10285 177 HKALKETTNRYSFNDAE-APSGYVDPAKTDEHYHIK 211 (673)
Q Consensus 177 ~~~~~~~~~~~~~~~~~-~~~g~l~v~~~~~~~~~~ 211 (673)
+..+|+.+.+. +.++. ...+.+. ..++...+.+
T Consensus 87 ~~~~~~~l~~~-g~~~~~~~~g~l~-~~~~~~~~~~ 120 (448)
T 3axb_A 87 TVRLFEDAQRG-GEDLGLVKSGYLF-VYDRERWREV 120 (448)
T ss_dssp HHHHHHHHHHT-TCCCCCBCCCEEE-EECHHHHHHH
T ss_pred HHHHHHHHHhc-CcccccccCCEEE-EcCHHHHHHH
Confidence 66677766544 44454 6677777 5555443433
No 171
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.36 E-value=5.4e-06 Score=85.87 Aligned_cols=36 Identities=28% Similarity=0.587 Sum_probs=32.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccC--CCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLD--GCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~--g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+.+|+.|+ +. |.+|+|+|+.+.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la---~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIA---KNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHH---HHCTTSCEEEECSSSS
T ss_pred CcCCEEEECccHHHHHHHHHHH---hcCCCCeEEEEecCcc
Confidence 3479999999999999999999 55 999999999887
No 172
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.35 E-value=5.8e-07 Score=100.80 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=46.0
Q ss_pred HHHHcCCeEE-EeceeEEEec----CCccccccCCCCCCccceeeEEEEcCCC-CeeEEec-CEEEEcCCCC-cHHHHHH
Q psy10285 416 KAISLGAEYV-RGEVVDFLRR----RNNQVHYEGYDDGEYHSVNECVVRDEKG-ELKTITF-AICVIAAGAY-SGQVARM 487 (673)
Q Consensus 416 ~~~~~Gv~i~-~~~V~~i~~~----~~~~~~~~~~~~~~~~~v~gv~V~t~~G-~~~~i~a-d~VVlAtG~~-s~~l~~~ 487 (673)
.+.+.|++|+ ++.|++|..+ +. ++++||.+...+| +..+++| +-||+|+|++ +++||..
T Consensus 217 ~~~r~NL~Vlt~a~V~rIl~~~~~~g~-------------~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~l 283 (566)
T 3fim_B 217 AQSRPNLSVLINAQVTKLVNSGTTNGL-------------PAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQL 283 (566)
T ss_dssp HTTCTTEEEESSCEEEEEECCEEETTE-------------EECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred hccCCCeEEECCCEEEEEEeecCCCCC-------------CEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHh
Confidence 3345689999 4699999886 22 4788988877655 6678889 6699999966 7777765
Q ss_pred cCC
Q psy10285 488 LKI 490 (673)
Q Consensus 488 ~g~ 490 (673)
.||
T Consensus 284 SGI 286 (566)
T 3fim_B 284 SGI 286 (566)
T ss_dssp TTE
T ss_pred cCC
Confidence 554
No 173
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.34 E-value=2.2e-06 Score=96.05 Aligned_cols=36 Identities=28% Similarity=0.422 Sum_probs=33.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||||++|+.+|..|+ +.|.+|+|+|+.+.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~---~~G~~v~iiE~~~~ 50 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLR---ELGRSVHVIETAGD 50 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHH---HTTCCEEEECSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHH---hCCCCEEEEeCCCC
Confidence 4689999999999999999999 78999999999876
No 174
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.33 E-value=7.2e-07 Score=96.76 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=31.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+||+|||||++|+++|+.|+ +.|.+|+|+|++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~---~~G~~V~vlE~~~~ 35 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLT---NAGKKVLLLEGGER 35 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHH---HTTCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHH---HcCCeEEEEecCCC
Confidence 68999999999999999999 88999999999765
No 175
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.33 E-value=4.5e-07 Score=95.72 Aligned_cols=97 Identities=21% Similarity=0.173 Sum_probs=61.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCCCCccccccchhhcCCCcc---cccccC
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRISTSGQPTQ---ESKVSD 175 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~---~~~~~~ 175 (673)
.++||||||||++|+++|++|+++ |++|+|||++.. ++.+++..+.+.+........ ...+..
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~---G~~V~vlE~~~~-----------~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~ 68 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAG---GHEVLVAEAAEG-----------IGTGTSSRNSEVIHAGIYYPADSLKARLCV 68 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS-----------SSCSTTSSSCCEECCCCSSCTTCHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC---CCeEEEEeCCCC-----------CCCccCcCCccccccCccCCCCCHhHHHHH
Confidence 358999999999999999999999 999999999852 355566656555533221111 112233
Q ss_pred chHHHHHhhcccccCCccCCCceEEEeeCchhhHH
Q psy10285 176 PHKALKETTNRYSFNDAEAPSGYVDPAKTDEHYHI 210 (673)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~g~l~v~~~~~~~~~ 210 (673)
.+...+..+.+...... ...+.+.+..+......
T Consensus 69 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~ 102 (369)
T 3dme_A 69 RGKHLLYEYCAARGVPH-QRLGKLIVATSDAEASQ 102 (369)
T ss_dssp HHHHHHHHHHHHHTCCE-ECCCEEEEECSHHHHTT
T ss_pred HHHHHHHHHHHHcCCCc-ccCCEEEEecCHHHHHH
Confidence 34445555443322221 56788888776554433
No 176
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.33 E-value=3.5e-06 Score=94.39 Aligned_cols=66 Identities=11% Similarity=0.107 Sum_probs=48.5
Q ss_pred HHHHHHH-HcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCC-CCeeEEecC-EEEEcCCC-CcHHHHH
Q psy10285 412 AVKKKAI-SLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEK-GELKTITFA-ICVIAAGA-YSGQVAR 486 (673)
Q Consensus 412 ~l~~~~~-~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~-G~~~~i~ad-~VVlAtG~-~s~~l~~ 486 (673)
.+++.+. +.|++|+. +.|++|..+++ +++.+|.+.... |+..+++|+ .||+|+|+ ++.+|+.
T Consensus 213 a~l~~a~~~~~~~i~~~~~V~~i~~~~~-------------~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~ 279 (546)
T 2jbv_A 213 SYIHPIVEQENFTLLTGLRARQLVFDAD-------------RRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLM 279 (546)
T ss_dssp HHTGGGTTCTTEEEECSCEEEEEEECTT-------------SBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEECCC-------------CeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhh
Confidence 3444443 56899995 59999998763 578887666532 656689998 89999999 4888887
Q ss_pred HcCC
Q psy10285 487 MLKI 490 (673)
Q Consensus 487 ~~g~ 490 (673)
..|+
T Consensus 280 ~SGi 283 (546)
T 2jbv_A 280 LSGI 283 (546)
T ss_dssp HTTE
T ss_pred hcCC
Confidence 6665
No 177
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.31 E-value=4.6e-06 Score=86.96 Aligned_cols=57 Identities=16% Similarity=0.147 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 405 DPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
.+..+...+.+.+.+.+++++. ++|+.+..+++ .+.|.+.+| .++.+|.||+|+|..
T Consensus 63 ~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-----------------~~~v~~~~g--~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 63 YAKDLVKGLVEQVAPFNPVYSLGERAETLEREGD-----------------LFKVTTSQG--NAYTAKAVIIAAGVG 120 (335)
T ss_dssp EHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETT-----------------EEEEEETTS--CEEEEEEEEECCTTS
T ss_pred CHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCC-----------------EEEEEECCC--CEEEeCEEEECCCCC
Confidence 3466777778888888999874 58999987653 567888877 479999999999985
No 178
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.31 E-value=3.2e-06 Score=88.07 Aligned_cols=36 Identities=17% Similarity=0.307 Sum_probs=32.9
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCC
Q psy10285 242 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 280 (673)
Q Consensus 242 ~~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~ 280 (673)
+..+||+|||+|++|+++|..|+ +.|.+|+|+|+.+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~---~~g~~v~vie~~~ 55 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLA---RAEIKPILYEGMM 55 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHH---HTTCCCEEECCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHH---HCCCCEEEEecCC
Confidence 46789999999999999999999 7899999999976
No 179
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.30 E-value=3.6e-07 Score=91.05 Aligned_cols=35 Identities=34% Similarity=0.433 Sum_probs=32.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
++||+|||||++||++|+.|+++ |++|+|+||...
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~---G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA---GHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC---CCCEEEEECCCC
Confidence 48999999999999999999999 999999999763
No 180
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.30 E-value=7.6e-07 Score=94.98 Aligned_cols=90 Identities=14% Similarity=0.224 Sum_probs=60.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCC--CCccccccchhhcC-CCcccccccCc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGD--QESSNDKDRISTSG-QPTQESKVSDP 176 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~~-~~~~~~~~~~~ 176 (673)
++||||||||++|+++|++|+++ |++|+|||++.. +. +++..+.+.+.... .......+...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~---G~~V~vie~~~~------------~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~ 67 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ---GVKTLLVDAFDP------------PHTNGSHHGDTRIIRHAYGEGREYVPLALR 67 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSCS------------SCSSSSSCSSEEEECSSCTTCGGGHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC---CCeEEEEeCCCC------------CCCCCCCCCcchhhhhhhcCCchHHHHHHH
Confidence 48999999999999999999999 999999999864 32 44444444443211 11122334556
Q ss_pred hHHHHHhhcccccCCccCCCceEEEeeC
Q psy10285 177 HKALKETTNRYSFNDAEAPSGYVDPAKT 204 (673)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~g~l~v~~~ 204 (673)
+..+|+.+.+..+.+.....+.+.+...
T Consensus 68 ~~~~~~~l~~~~~~~~~~~~g~~~~~~~ 95 (389)
T 2gf3_A 68 SQELWYELEKETHHKIFTKTGVLVFGPK 95 (389)
T ss_dssp HHHHHHHHHHHCSSCCEECCCEEEEEET
T ss_pred HHHHHHHHHHHhCCcceeecceEEEcCC
Confidence 6677777655444332366788877765
No 181
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.29 E-value=1.8e-06 Score=95.61 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=42.8
Q ss_pred HHHHHcCCeEEEe-ceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHH-HHHHcCC
Q psy10285 415 KKAISLGAEYVRG-EVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQ-VARMLKI 490 (673)
Q Consensus 415 ~~~~~~Gv~i~~~-~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~-l~~~~g~ 490 (673)
+.+++.|++++.+ .|+++..++ ++.+ |.+.+| .++.+|.||+|+|..... +++.+|+
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~---------------~v~~--v~~~~g--~~i~aD~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNE---------------KVER--VIDMNN--HEYKVDALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSS---------------SCCE--EEETTC--CEEECSEEEECCCEEECCHHHHHTTC
T ss_pred HHHHhCCcEEEeCCeeEEEecCC---------------ceEE--EEeCCC--eEEEeCEEEECCCcCcCchHHHhcCC
Confidence 5567789999965 899997543 2334 567777 489999999999987654 7777664
No 182
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.29 E-value=3.4e-06 Score=90.54 Aligned_cols=36 Identities=28% Similarity=0.420 Sum_probs=33.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||||++|+.+|..|+ +.|.+|+|+|+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~---~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLR---DAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHH---HTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHH---hCCCCEEEEecCCC
Confidence 4579999999999999999999 88999999999865
No 183
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.28 E-value=3.6e-06 Score=86.77 Aligned_cols=59 Identities=17% Similarity=0.259 Sum_probs=46.1
Q ss_pred eCHHHHHHHHHHHHHHcCCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 404 FDPWLYLNAVKKKAISLGAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 404 i~~~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
+++..+...+.+.+.+.|++++.++|+++..+++ .+.|.+.+| .++++|.||+|+|.++
T Consensus 56 ~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~~~~-----------------~~~v~~~~g--~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 56 VSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDS-----------------HFVILAEDG--KTFEAKSVIIATGGSP 114 (311)
T ss_dssp BCHHHHHHHHHHHHHTTSCEEECSCEEEEEEETT-----------------EEEEEETTS--CEEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEEEEEEEEEcCC-----------------EEEEEEcCC--CEEECCEEEECCCCCC
Confidence 3456677777777888899998888999987663 566777777 3899999999999754
No 184
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.25 E-value=1.2e-05 Score=86.35 Aligned_cols=59 Identities=10% Similarity=0.031 Sum_probs=44.7
Q ss_pred eeCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 403 WFDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 403 ~i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
.++...+.+.|.+.+. +++++. ++|++++.+++ ++.|++.+|+ +++||.||.|+|.++
T Consensus 124 ~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~-----------------~v~v~~~~g~--~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 124 EINRNDLRAILLNSLE--NDTVIWDRKLVMLEPGKK-----------------KWTLTFENKP--SETADLVILANGGMS 182 (398)
T ss_dssp EECHHHHHHHHHHTSC--TTSEEESCCEEEEEECSS-----------------SEEEEETTSC--CEEESEEEECSCTTC
T ss_pred eECHHHHHHHHHhhcC--CCEEEECCEEEEEEECCC-----------------EEEEEECCCc--EEecCEEEECCCcch
Confidence 3556677777777654 367774 59999988764 5678888884 799999999999986
Q ss_pred H
Q psy10285 482 G 482 (673)
Q Consensus 482 ~ 482 (673)
.
T Consensus 183 ~ 183 (398)
T 2xdo_A 183 K 183 (398)
T ss_dssp S
T ss_pred h
Confidence 4
No 185
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.25 E-value=2.3e-06 Score=90.58 Aligned_cols=59 Identities=12% Similarity=0.054 Sum_probs=46.7
Q ss_pred eCHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcH
Q psy10285 404 FDPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSG 482 (673)
Q Consensus 404 i~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~ 482 (673)
+.+..+...+.+.+++.|++++. ++|+++..+++ ++.|.+.+| ++.+|+||+|+|.++.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~-----------------~~~v~~~~g---~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDA-----------------YYTIATTTE---TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-----------------SEEEEESSC---CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCC-----------------eEEEEeCCC---EEEeCEEEECCCCCCc
Confidence 45566777778888888999985 58999987653 466777777 6899999999999753
No 186
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.25 E-value=1e-06 Score=96.64 Aligned_cols=35 Identities=17% Similarity=0.364 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCC--ceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDG--CRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g--~~v~vie~~~~ 137 (673)
.+||+|||||++|+.+|..|++. | .+|+|||+...
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~---g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH---HSRAHVDIYEKQLV 42 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH---CSSCEEEEECSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc---CCCCCEEEEeCCCc
Confidence 47999999999999999999999 7 99999999864
No 187
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.25 E-value=8.2e-06 Score=86.11 Aligned_cols=59 Identities=15% Similarity=0.150 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 405 DPWLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
.+..+...+.+.+++.|++++. ++|+.+...++ + .+.|.+.+| .++++|.||+|+|..+
T Consensus 72 ~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-------------~---~~~v~~~~g--~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 72 PAIDLVESLWAQAERYNPDVVLNETVTKYTKLDD-------------G---TFETRTNTG--NVYRSRAVLIAAGLGA 131 (360)
T ss_dssp EHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTT-------------S---CEEEEETTS--CEEEEEEEEECCTTCS
T ss_pred CHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCC-------------c---eEEEEECCC--cEEEeeEEEEccCCCc
Confidence 4566777788888888999884 58999987653 1 466888887 4799999999999853
No 188
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.24 E-value=3.8e-05 Score=87.97 Aligned_cols=36 Identities=28% Similarity=0.472 Sum_probs=33.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhcc-----CCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVL-----DGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~-----~g~~v~~ie~~~~ 281 (673)
..+||+|||||++|+.+|..|+ + .|.+|+||||.+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La---~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLS---EYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH---HHHHHSTTCCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHh---ccccccCCCCEEEEeCCCC
Confidence 3579999999999999999999 7 8999999999765
No 189
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.24 E-value=1.5e-06 Score=103.84 Aligned_cols=36 Identities=31% Similarity=0.547 Sum_probs=33.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+|||||||||++|+++|+.|++. |++|+|||++..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~---G~~V~lie~~~~ 162 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRS---GARVMLLDERAE 162 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhC---CCcEEEEeCCCC
Confidence 358999999999999999999999 999999999753
No 190
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.24 E-value=1.9e-06 Score=93.78 Aligned_cols=37 Identities=30% Similarity=0.507 Sum_probs=33.9
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~~~ 137 (673)
..++||||||||++|+++|++|+++ |. +|+|||++..
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~---G~~~V~vlE~~~~ 41 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARR---GYTNVTVLDPYPV 41 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHT---TCCCEEEEESSCS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHc---CCCcEEEEeCCCC
Confidence 3468999999999999999999999 99 9999999874
No 191
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.23 E-value=2.6e-06 Score=102.44 Aligned_cols=34 Identities=21% Similarity=0.442 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~~ 136 (673)
.+||+|||||++|+++|+.|++. |+ +|+|+|+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~---G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL---GYSDITIFEKQE 221 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT---TCCCEEEEESSS
T ss_pred CCEEEEECccHHHHHHHHHHHhc---CCCcEEEEeCCC
Confidence 58999999999999999999999 88 799999975
No 192
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.22 E-value=2.6e-06 Score=95.71 Aligned_cols=60 Identities=7% Similarity=0.083 Sum_probs=44.7
Q ss_pred HHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEec-CEEEEcCCCC-cHHHHHHcC
Q psy10285 418 ISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITF-AICVIAAGAY-SGQVARMLK 489 (673)
Q Consensus 418 ~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~a-d~VVlAtG~~-s~~l~~~~g 489 (673)
.+.|++|+ ++.|++|..++++ ++++||.+...+|...+++| +-||+|+|++ +++||-..|
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~------------~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SG 279 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEAD------------RTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSG 279 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTT------------TEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTT
T ss_pred cCCCeEEEcCcEEEEEEEeCCC------------CEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcC
Confidence 34589998 5699999987421 68999888876677678889 4699999976 556665444
No 193
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.22 E-value=3.4e-06 Score=90.91 Aligned_cols=63 Identities=14% Similarity=0.011 Sum_probs=46.9
Q ss_pred eeCHHHHHHHHHHHHHHc-C-CeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCC---CCeeEEecCEEEEc
Q psy10285 403 WFDPWLYLNAVKKKAISL-G-AEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEK---GELKTITFAICVIA 476 (673)
Q Consensus 403 ~i~~~~~~~~l~~~~~~~-G-v~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~---G~~~~i~ad~VVlA 476 (673)
.++...+...|.+.+++. | ++++. ++|++++. ++ ++.|.+.+ |+..+++||.||.|
T Consensus 103 ~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~-----------------~v~v~~~~~~~g~~~~~~ad~vV~A 164 (410)
T 3c96_A 103 SIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RD-----------------GRVLIGARDGHGKPQALGADVLVGA 164 (410)
T ss_dssp EEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET-----------------TEEEEEEEETTSCEEEEEESEEEEC
T ss_pred eeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC-----------------ccEEEEecCCCCCceEEecCEEEEC
Confidence 466778888999988774 6 57885 59999988 53 34455443 64457999999999
Q ss_pred CCCCcHH
Q psy10285 477 AGAYSGQ 483 (673)
Q Consensus 477 tG~~s~~ 483 (673)
+|.++..
T Consensus 165 dG~~S~v 171 (410)
T 3c96_A 165 DGIHSAV 171 (410)
T ss_dssp CCTTCHH
T ss_pred CCccchh
Confidence 9998753
No 194
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.22 E-value=2.5e-06 Score=98.32 Aligned_cols=102 Identities=15% Similarity=0.142 Sum_probs=64.1
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCCCCccccccchhhcCCCcc--ccccc---
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRISTSGQPTQ--ESKVS--- 174 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~~--- 174 (673)
.+||||||||++|+++|+.|+++ |++|+|||++.. ++.+++..+.+.+........ ...+.
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~---G~~V~vlEk~~~-----------~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~ 337 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR---GWQVTLYCADEA-----------PALGASGNRQGALYPLLSKHDEALNRFFSNA 337 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT---TCEEEEEESSSS-----------SSCSTTCCSCEEECCCCCSSCHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHC---CCeEEEEeCCCc-----------ccccCccCCCceecCcCCCCccHHHHHHHHH
Confidence 48999999999999999999999 999999999753 355566666665543221111 11111
Q ss_pred -CchHHHHHhhcccccCCcc-CCCceEEEeeCchhhHHHHHhhhccc
Q psy10285 175 -DPHKALKETTNRYSFNDAE-APSGYVDPAKTDEHYHIKRAMRILKL 219 (673)
Q Consensus 175 -~~~~~~~~~~~~~~~~~~~-~~~g~l~v~~~~~~~~~~~~~~~~g~ 219 (673)
..+.++++.+ ..... ...+.+.+..++...+.+..+...+.
T Consensus 338 ~~~~~~~~~~l----~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~ 380 (676)
T 3ps9_A 338 FTFARRFYDQL----PVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDL 380 (676)
T ss_dssp HHHHHHHHHHC----CSCCCEECCCEEEECCSHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHC----CCCcCcCcCCeeeecCCHHHHHHHHHHHhcCC
Confidence 1123333332 33444 56788888877666555554444443
No 195
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.21 E-value=8e-06 Score=84.14 Aligned_cols=36 Identities=19% Similarity=0.365 Sum_probs=33.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+.+||+|||+|++|+++|+.|+ +.|++|+|+|+...
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~la---r~g~~v~lie~~~~ 40 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLG---RARKQIALFDNNTN 40 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHH---HTTCCEEEEECSCC
T ss_pred CCcCEEEECCCHHHHHHHHHHH---HCCCCEEEEeCCCC
Confidence 5689999999999999999999 88999999999876
No 196
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.20 E-value=5.6e-06 Score=85.78 Aligned_cols=36 Identities=33% Similarity=0.603 Sum_probs=32.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|..|+ +.|.+|+|+|+...
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~---~~g~~v~lie~~~~ 50 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAA---RSGFSVAILDKAVA 50 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSST
T ss_pred CCCcEEEECcCHHHHHHHHHHH---hCCCcEEEEeCCCC
Confidence 4589999999999999999999 78999999999544
No 197
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.20 E-value=1.6e-06 Score=91.84 Aligned_cols=93 Identities=19% Similarity=0.322 Sum_probs=58.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCCCCccccccchhh-cCCCcccccccCchH
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRIST-SGQPTQESKVSDPHK 178 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~ 178 (673)
++||||||||++|+++|++|+++ |++|+|||++.... +...+..+.+.+.. .+.......+...+.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~---G~~V~vle~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 68 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA---GLNVLMTDAHMPPH----------QHGSHHGDTRLIRHAYGEGEKYVPLVLRAQ 68 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT---TCCEEEECSSCSSS----------SSSSCCSSEEEECSSCTTCGGGHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHC---CCeEEEEecCCCCC----------CCCCCCCccceeeeccCCCchHHHHHHHHH
Confidence 48999999999999999999999 99999999986410 11122222222221 111122233455667
Q ss_pred HHHHhhcccccCC-cc-CCCceEEEeeCch
Q psy10285 179 ALKETTNRYSFND-AE-APSGYVDPAKTDE 206 (673)
Q Consensus 179 ~~~~~~~~~~~~~-~~-~~~g~l~v~~~~~ 206 (673)
.+|+.+. ..+.+ .. ...|.+.++..+.
T Consensus 69 ~~~~~l~-~~~~~~~~~~~~g~l~~~~~~~ 97 (372)
T 2uzz_A 69 MLWDELS-RHNEDDPIFVRSGVINLGPADS 97 (372)
T ss_dssp HHHHHHH-TTCSSSCSEECCCEEEEEETTC
T ss_pred HHHHHHH-HhCCCccceeeeceEEEeCCCc
Confidence 7777765 33331 22 5778888776543
No 198
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.20 E-value=3.2e-06 Score=93.66 Aligned_cols=36 Identities=31% Similarity=0.521 Sum_probs=33.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||||++|+++|..|+ +.|.+|+|||+.+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La---~~G~~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELA---LLGARVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHH---HTTCEEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHH---HCCCeEEEEEeccc
Confidence 4689999999999999999999 88999999999876
No 199
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.16 E-value=5.9e-06 Score=85.73 Aligned_cols=57 Identities=12% Similarity=0.100 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHHHHcCCeEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 405 DPWLYLNAVKKKAISLGAEYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~Gv~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
.+..+...+.+.+++.|++++ +++|+++...++ ..+.|.+.+| ++.+|.||+|+|..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~----------------~~~~v~~~~g---~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 65 RAQELINNLKEQMAKFDQTICLEQAVESVEKQAD----------------GVFKLVTNEE---THYSKTVIITAGNG 122 (332)
T ss_dssp EHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTT----------------SCEEEEESSE---EEEEEEEEECCTTS
T ss_pred CHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCC----------------CcEEEEECCC---EEEeCEEEECCCCC
Confidence 456777788888888899998 469999987653 1466888888 59999999999984
No 200
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.15 E-value=4.1e-06 Score=96.64 Aligned_cols=105 Identities=17% Similarity=0.104 Sum_probs=66.6
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCCCCccccccchhhcCCCcc--cccc----
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRISTSGQPTQ--ESKV---- 173 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~---- 173 (673)
.+||||||||++|+++|+.|+++ |++|+|||++.. ++.+++..+.+.+........ ...+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~---G~~V~vlEk~~~-----------~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~ 329 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRR---GAVVTLYCADAQ-----------PAQGASGNRQGALYPLLNGKNDALETFFTSA 329 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTT---TCCEEEEESSSS-----------TTCSGGGCSCEEECCCCCSSCSHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHC---CCcEEEEeCCCc-----------cccccccccCCEEecCCCCCChHHHHHHHHH
Confidence 48999999999999999999999 999999999753 355666666666543221111 1111
Q ss_pred cCchHHHHHhhcccccCCcc-CCCceEEEeeCchhhHHHHHhhhccc
Q psy10285 174 SDPHKALKETTNRYSFNDAE-APSGYVDPAKTDEHYHIKRAMRILKL 219 (673)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~-~~~g~l~v~~~~~~~~~~~~~~~~g~ 219 (673)
...+..+++.+.+ .+.... ...|.+.+..++...+.+..+...+.
T Consensus 330 ~~~a~~~~~~l~~-~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~ 375 (689)
T 3pvc_A 330 FTFARRQYDQLLE-QGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQW 375 (689)
T ss_dssp HHHHHHHHHHHHH-TTCCCCEECCCEEEECCSHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHhhh-hccccccccCceEEeccCHHHHHHHHHHHhcCC
Confidence 1224455554421 133444 56888888877766555554443333
No 201
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.15 E-value=9.9e-06 Score=90.18 Aligned_cols=36 Identities=25% Similarity=0.492 Sum_probs=33.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||||++|+++|+.|+ +.|++|+|+|++..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~---~~G~~V~vlE~~~~ 38 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLH---DSGLNVVVLEARDR 38 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHH---HTTCCEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHH---HCCCCEEEEeCCCC
Confidence 3478999999999999999999 78999999999876
No 202
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.14 E-value=1.2e-05 Score=83.50 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHcCCeEEEeceeEEEec--CCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 406 PWLYLNAVKKKAISLGAEYVRGEVVDFLRR--RNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 406 ~~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~--~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
+..+...+.+.+++.|++++.++|+++... ++ . .+.|.+.+| .++.+|+||+|+|...
T Consensus 64 ~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~--------------~--~~~v~~~~g--~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 64 GMELAQRMHQQAEKFGAKVEMDEVQGVQHDATSH--------------P--YPFTVRGYN--GEYRAKAVILATGADP 123 (325)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSS--------------S--CCEEEEESS--CEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEeeeEEEEEeccCCC--------------c--eEEEEECCC--CEEEeCEEEECcCCCc
Confidence 456667777888888999988899999876 42 1 145666667 3899999999999854
No 203
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.12 E-value=1.2e-05 Score=87.96 Aligned_cols=38 Identities=18% Similarity=0.025 Sum_probs=32.0
Q ss_pred cccEEEECCChHHHHHHHHHHH-hcC---CCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKE-KVL---DGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~-~~~---~g~~v~vie~~~~ 137 (673)
.+||+|||||++|+++|..|++ ... .|.+|+|||+...
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 3799999999999999999998 621 1689999999753
No 204
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.12 E-value=1.3e-06 Score=93.11 Aligned_cols=35 Identities=26% Similarity=0.551 Sum_probs=32.9
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+|||+|||||++|+++|+.|++. |++|+||||+..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~---G~~V~v~Er~~~ 38 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKY---GLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC---CCcEEEEeCCCC
Confidence 59999999999999999999999 999999999753
No 205
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.11 E-value=1.8e-05 Score=86.06 Aligned_cols=59 Identities=14% Similarity=0.144 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHHH
Q psy10285 407 WLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQV 484 (673)
Q Consensus 407 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~l 484 (673)
..+.++|.+.+++.|++|+. ++|++|..++ +++.+ |.+ +| .+++||.||+|+|.++..+
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~--------------~~v~~--v~~-~g--~~~~ad~VV~a~~~~~~~~ 293 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMEN--------------GKVVG--VKS-EG--EVARCKQLICDPSYVPDRV 293 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEET--------------TEEEE--EEE-TT--EEEECSEEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC--------------CEEEE--EEE-CC--eEEECCEEEECCCCCcccc
Confidence 58899999999999999984 6999998766 34444 444 56 4899999999999997533
No 206
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.11 E-value=1.7e-05 Score=86.51 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=33.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|+.|+ +.|.+|+|+|+...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~---~~g~~v~v~E~~~~ 39 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALR---KAGLSVAVIEARDR 39 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH---HTTCCEEEECSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHH---HCCCcEEEEECCCC
Confidence 3579999999999999999999 78999999999876
No 207
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.09 E-value=1.4e-05 Score=82.43 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=32.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||+|++|+++|..|+ +.|++|+|+|+...
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la---~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLG---RSSLKPVMYEGFMA 38 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHH---HTTCCCEEECCSSG
T ss_pred CCcEEEECCCHHHHHHHHHHH---HCCCCEEEEecCCC
Confidence 489999999999999999999 88999999999876
No 208
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.09 E-value=3.3e-05 Score=84.89 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=33.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+.+|..|+ +.|.+|+|||+.+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la---~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSA---QLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHH---HHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHH---hCCCEEEEEeCCCc
Confidence 4589999999999999999999 78999999999875
No 209
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.08 E-value=1.3e-05 Score=88.87 Aligned_cols=38 Identities=18% Similarity=0.349 Sum_probs=32.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+++|+|||+|.+|..+|..|+++ ..+.+|+++-|++.
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~-~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKR-YPNSRTTLIMRDSA 282 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-STTCEEEEECSSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhc-CCCceEEEEeCCCc
Confidence 678999999999999999999832 35789999999875
No 210
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.06 E-value=3.9e-05 Score=83.67 Aligned_cols=36 Identities=28% Similarity=0.326 Sum_probs=33.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCC--eEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGC--RVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~--~v~~ie~~~~ 281 (673)
..+||+|||||++|+++|..|+ +.|. +|+|+|+...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~---~~G~~~~V~v~E~~~~ 42 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALL---AEKAFDQVTLFERRGS 42 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHH---TTTCCSEEEEECSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHH---hcCCCCCeEEEecCCC
Confidence 4579999999999999999999 8898 9999999865
No 211
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.05 E-value=3.6e-05 Score=79.35 Aligned_cols=36 Identities=25% Similarity=0.489 Sum_probs=33.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++||+|||+|++|+++|..|+ +.|++|+|+|+...
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~---~~g~~V~liE~~~~ 40 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYAS---RANLKTVMIERGIP 40 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHH---HCCCCEEEEecCCC
Confidence 4699999999999999999999 88999999999766
No 212
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.04 E-value=6.1e-06 Score=95.80 Aligned_cols=36 Identities=25% Similarity=0.379 Sum_probs=33.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|+.|+ +.|.+|+|+|+...
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~---~~g~~v~v~E~~~~ 370 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLH---NFGIKVTVLEAKDR 370 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHH---HHTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHH---HCCCcEEEEecccc
Confidence 4689999999999999999999 78999999999765
No 213
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.04 E-value=1.4e-05 Score=86.39 Aligned_cols=36 Identities=22% Similarity=0.441 Sum_probs=33.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCC-CeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDG-CRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g-~~v~~ie~~~~ 281 (673)
+.+||+|||||++|+++|+.|+ +.| .+|+|+|+...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~---~~g~~~v~v~E~~~~ 41 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLE---QAGFHDYTILERTDH 41 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHH---HTTCCCEEEECSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHH---hCCCCcEEEEECCCC
Confidence 4579999999999999999999 789 89999999876
No 214
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.04 E-value=3.6e-06 Score=89.06 Aligned_cols=37 Identities=30% Similarity=0.604 Sum_probs=33.8
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+++||||||||++|+++|++|+++ |++|+|||++..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~---G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARK---GYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC---CCEEEEEeccCC
Confidence 3468999999999999999999999 999999999764
No 215
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.03 E-value=4.5e-05 Score=84.88 Aligned_cols=36 Identities=33% Similarity=0.359 Sum_probs=33.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+.+|..|+ +.|.+|+|||+.+.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la---~~G~~V~liEk~~~ 66 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAA---QYGKKVMVLDFVTP 66 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHH---HTTCCEEEECCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHH---hCCCeEEEEeccCc
Confidence 4689999999999999999999 78999999999764
No 216
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.02 E-value=2e-05 Score=82.01 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHHHcCCeEEEeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 405 DPWLYLNAVKKKAISLGAEYVRGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
++..+...+.+.+++.|++++.+.|+.+...++ .+.|.+ +| .++++|.||+|+|.++
T Consensus 68 ~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~-----------------~~~v~~-~~--~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 68 LGVELTDKFRKQSERFGTTIFTETVTKVDFSSK-----------------PFKLFT-DS--KAILADAVILAIGAVA 124 (333)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECCCCCEEECSSS-----------------SEEEEC-SS--EEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHCCCEEEEeEEEEEEEcCC-----------------EEEEEE-CC--cEEEcCEEEECCCCCc
Confidence 345677778888888899998767989887653 456777 56 4899999999999874
No 217
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.02 E-value=3.3e-06 Score=88.95 Aligned_cols=47 Identities=26% Similarity=0.336 Sum_probs=38.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCC------ceEEEEecccccccCcCCCCCCCCCCCccccccchh
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDG------CRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRIS 162 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g------~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 162 (673)
.||||||||++|+++|++|+++ | ++|+|||++.. +.++|..+.+.+.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~---G~~~~p~~~V~vlE~~~~------------~~~aS~~~~g~~~ 53 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHER---YHSVLQPLDIKVYADRFT------------PLTTTDVAAGLWQ 53 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---HTTTSSSCEEEEEESSCG------------GGSGGGTCCCBCC
T ss_pred CcEEEECCCHHHHHHHHHHHHh---ccccCCCceEEEEECCCC------------CCCccccCcceee
Confidence 3899999999999999999999 7 89999999864 4455555655554
No 218
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.00 E-value=1.6e-05 Score=87.72 Aligned_cols=36 Identities=22% Similarity=0.492 Sum_probs=33.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+.+||+|||+|++|+.+|+.|+ +.|.+|+|+|+...
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~---~~g~~v~v~E~~~~ 45 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQ---KAGYKVTVLEARTR 45 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHH---HTTCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHH---HCCCCEEEEeccCC
Confidence 5689999999999999999999 88999999999876
No 219
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.00 E-value=1.2e-05 Score=87.49 Aligned_cols=34 Identities=29% Similarity=0.518 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHH---hcCCCceEEEEecccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKE---KVLDGCRVAVVDRDFT 137 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~---~~~~g~~v~vie~~~~ 137 (673)
.||||||||++|+++|+.|++ . |.+|+|||++..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~---g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS---GHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG---GSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC---cCEEEEEeCCCC
Confidence 699999999999999999999 6 899999999764
No 220
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.99 E-value=2.1e-05 Score=87.78 Aligned_cols=67 Identities=13% Similarity=0.120 Sum_probs=47.6
Q ss_pred HHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEE---ecCEEEEcCCCC-cHHHHHH
Q psy10285 413 VKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTI---TFAICVIAAGAY-SGQVARM 487 (673)
Q Consensus 413 l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i---~ad~VVlAtG~~-s~~l~~~ 487 (673)
+.+.+++.|++|+. +.|++|..++++ .+++.++.+...+|+..++ .++.||+|+|++ +.+|+..
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~-----------~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~ 268 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAP-----------GLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLL 268 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSS-----------SCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCC-----------CCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHH
Confidence 34445567999995 599999886520 0378897777656754455 568999999987 7778766
Q ss_pred cCC
Q psy10285 488 LKI 490 (673)
Q Consensus 488 ~g~ 490 (673)
.|+
T Consensus 269 SGi 271 (536)
T 1ju2_A 269 SGV 271 (536)
T ss_dssp TTE
T ss_pred cCC
Confidence 665
No 221
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.99 E-value=3e-05 Score=80.09 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=32.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|..|+ +.|.+|+++|+...
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~---~~g~~v~lie~~~~ 39 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAA---RANLQPVLITGMEK 39 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH---TTTCCCEEECCSST
T ss_pred CcCCEEEECcCHHHHHHHHHHH---HCCCcEEEEccCCC
Confidence 4579999999999999999999 88999999997654
No 222
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.99 E-value=5.9e-06 Score=97.41 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=59.1
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEecccccccCcCCCCCCC-CCCCccccccchhhcCCCcccccccC
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDFTVNYDLDEDGSNP-GDQESSNDKDRISTSGQPTQESKVSD 175 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~ 175 (673)
+.++||||||||++|+++|++|+++ |. +|+|||++.. + ..+.+..+.+.+...........+..
T Consensus 2 ~~~~dVvIIGgGi~Gls~A~~La~~---G~~~V~vlE~~~~-----------~~~~gss~~~~G~~~~~~~~~~~~~l~~ 67 (830)
T 1pj5_A 2 ASTPRIVIIGAGIVGTNLADELVTR---GWNNITVLDQGPL-----------NMPGGSTSHAPGLVFQTNPSKTMASFAK 67 (830)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHHT---TCCCEEEECSSCT-----------TCCCSGGGTCCCEECCCCSCHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC---CCCcEEEEeCCCC-----------CCCcccceeCCceeecCCCCHHHHHHHH
Confidence 3458999999999999999999999 98 9999999863 1 12233333343322211112223344
Q ss_pred chHHHHHhhcccccCCccCCCceEEEeeCchhhH
Q psy10285 176 PHKALKETTNRYSFNDAEAPSGYVDPAKTDEHYH 209 (673)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~g~l~v~~~~~~~~ 209 (673)
.+.+++.++.+. +.......|.+.++.+++..+
T Consensus 68 ~s~~~~~~l~~~-~~~~~~~~G~l~~~~~~~~~~ 100 (830)
T 1pj5_A 68 YTVEKLLSLTED-GVSCFNQVGGLEVATTETRLA 100 (830)
T ss_dssp HHHHHHHHCEET-TEESEECCCEEEEESSHHHHH
T ss_pred HHHHHHHHHHhh-CCCCeeecCcEEEEeCHHHHH
Confidence 555666666321 211126778888887665433
No 223
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.99 E-value=4.1e-05 Score=81.86 Aligned_cols=34 Identities=26% Similarity=0.476 Sum_probs=31.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+|+|||||++|+.+|..|+ +.|.+|+|+||.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~---~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLR---KHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHH---HTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHH---hCCCCEEEEecCCC
Confidence 47999999999999999999 89999999999776
No 224
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.98 E-value=3.2e-05 Score=79.49 Aligned_cols=59 Identities=10% Similarity=0.081 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEe-ceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 407 WLYLNAVKKKAISLGAEYVRG-EVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 407 ~~~~~~l~~~~~~~Gv~i~~~-~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
..+...+.+.+++.|++++.+ +|+.+..+.+ .-..+.|.+.+| .++++|.||+|+|...
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--------------~~~~~~v~~~~g--~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 56 QKLAGALKVHVDEYDVDVIDSQSASKLIPAAV--------------EGGLHQIETASG--AVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEECCSS--------------TTCCEEEEETTS--CEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCeEEccCEEEEEEeccc--------------CCceEEEEECCC--CEEEeCEEEECcCCCc
Confidence 455666777777889999965 9999976431 001456778777 3799999999999854
No 225
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.97 E-value=4.1e-05 Score=84.22 Aligned_cols=35 Identities=31% Similarity=0.393 Sum_probs=32.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||+|++|+.+|..|+ +.|.+|+|+|+.+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~---~~G~~V~liE~~~~ 39 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAA---QLGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSSS
T ss_pred cCCEEEECCCHHHHHHHHHHH---HCCCeEEEEecCCC
Confidence 579999999999999999999 78999999999665
No 226
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.97 E-value=4.5e-05 Score=84.94 Aligned_cols=56 Identities=18% Similarity=0.109 Sum_probs=42.9
Q ss_pred cCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC-cHHHHHHcCC
Q psy10285 420 LGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY-SGQVARMLKI 490 (673)
Q Consensus 420 ~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~-s~~l~~~~g~ 490 (673)
.+..+.. ..|+++..++ ++++++.+...++ ...+.|+.||+|+|+. |++||-..|+
T Consensus 224 ~nl~v~~~~~v~~i~~~~--------------~~a~gv~~~~~~~-~~~~~a~~VILsAGai~SP~LLl~SGi 281 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLEG--------------NQVRSLEVVGRQG-SAEVFADQIVLCAGALESPALLMRSGI 281 (526)
T ss_dssp TTEEEECSCEEEEEEEET--------------TEEEEEEEEETTE-EEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred CCeEEEeCCEEEEEEecC--------------CeEEEEEEEecCc-eEEEeecceEEcccccCCcchhhhccC
Confidence 4678874 5899998876 6888887776655 4678899999999965 7788766554
No 227
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.96 E-value=4.3e-05 Score=79.73 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=32.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|..|+ +.|.+|+++|+...
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~---~~g~~v~lie~~~~ 48 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAA---RAQLAPLVFEGTSF 48 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHH---HTTCCCEEECCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHH---hCCCeEEEEecCCC
Confidence 5689999999999999999999 78999999997644
No 228
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.94 E-value=9.7e-05 Score=83.33 Aligned_cols=65 Identities=15% Similarity=0.025 Sum_probs=46.6
Q ss_pred HHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEec-CEEEEcCCCC-cHHHHHHcCCC
Q psy10285 417 AISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITF-AICVIAAGAY-SGQVARMLKIG 491 (673)
Q Consensus 417 ~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~a-d~VVlAtG~~-s~~l~~~~g~~ 491 (673)
+++.|++|+. +.|++|..++++ ..+++.+|.+...+|+..+++| +.||+|+|++ +++||...|+.
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~----------~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIG 308 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTA----------SGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIG 308 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEET----------TEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEE
T ss_pred hcCCCcEEEcCCEEEEEEECCCC----------CCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCC
Confidence 3456899995 599999876420 0047889877655676668899 8999999985 67777666653
No 229
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.92 E-value=8.4e-06 Score=90.32 Aligned_cols=38 Identities=32% Similarity=0.418 Sum_probs=33.9
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+.+||||||||++||+||++|++.. |++|+|+|++..
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~--G~~V~VlE~~~~ 45 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQID--GPSWMIVDSNET 45 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHC--CSCEEEEESSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhC--CCCEEEEECCCC
Confidence 35699999999999999999999853 899999999875
No 230
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.91 E-value=6.1e-05 Score=83.07 Aligned_cols=36 Identities=36% Similarity=0.381 Sum_probs=32.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+.+|..|+ +.|.+|+|||+.+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la---~~G~~V~liEk~~~ 40 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAA---QLGKKVAVADYVEP 40 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHH---HTTCCEEEECCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHH---hCCCeEEEEEeccc
Confidence 5689999999999999999999 88999999998544
No 231
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.90 E-value=2.7e-05 Score=85.90 Aligned_cols=36 Identities=25% Similarity=0.230 Sum_probs=32.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCC-CeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDG-CRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g-~~v~~ie~~~~ 281 (673)
..++|+|||+|++|+.+|+.|+ +.| .+|+|+|+.+.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~---~~g~~~v~v~E~~~~ 44 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLT---ELGYKNWHLYECNDT 44 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHH---HTTCCSEEEEESSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHH---HcCCCCEEEEeCCCC
Confidence 4589999999999999999999 777 79999999876
No 232
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.90 E-value=0.00019 Score=79.21 Aligned_cols=36 Identities=33% Similarity=0.411 Sum_probs=32.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+.+||+|||||++|+.+|..|+ +.|.+|+|||+...
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la---~~G~~V~liEk~~~ 59 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAA---QLGMKVAVVEKRST 59 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHH---HTTCCEEEEESSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHH---HCCCeEEEEecCCC
Confidence 4589999999999999999999 88999999998765
No 233
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.89 E-value=7.9e-06 Score=90.56 Aligned_cols=48 Identities=27% Similarity=0.360 Sum_probs=41.0
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCCCCccccccchh
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRIS 162 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 162 (673)
.+||+|||||++|+++|+.|+++ |++|+|||++.. +.++|+.+.+.+.
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~---G~~V~llE~~~~------------~~gtS~~s~gli~ 50 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGR---GLSVLMLEAQDL------------ACATSSASSKLIH 50 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT---TCCEEEECSSST------------TCSGGGSSCCEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC---CCCEEEEECCCC------------CCCcccccccccc
Confidence 48999999999999999999999 999999999864 5566666666654
No 234
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.87 E-value=9.1e-05 Score=81.94 Aligned_cols=35 Identities=31% Similarity=0.439 Sum_probs=32.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccC---CCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLD---GCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~---g~~v~~ie~~~~ 281 (673)
.+||+|||+|++|+++|..|+ +. |.+|+|||+...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~---~~~~~G~~V~liE~~~~ 39 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAA---TSHPETTQVTVIDCDGI 39 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHH---HHCTTTEEEEEEESSCT
T ss_pred CCCEEEECCCHHHHHHHHHHH---hCCCCcCEEEEEeCCCc
Confidence 378999999999999999999 55 999999999876
No 235
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.85 E-value=4.3e-05 Score=84.68 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=48.2
Q ss_pred HHHHHHHc-CCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCC---CeeEEecCEEEEcCCCC-cHHHHH
Q psy10285 413 VKKKAISL-GAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKG---ELKTITFAICVIAAGAY-SGQVAR 486 (673)
Q Consensus 413 l~~~~~~~-Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G---~~~~i~ad~VVlAtG~~-s~~l~~ 486 (673)
+++.+++. |++|+. +.|++|..+++| +++.+|.+...+| +..+++|+.||+|+|++ +.+||.
T Consensus 227 ~l~~a~~~~n~~i~~~~~V~~i~~~~~g------------~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~ 294 (504)
T 1n4w_A 227 YLAAALGTGKVTIQTLHQVKTIRQTKDG------------GYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLV 294 (504)
T ss_dssp HHHHHHHTTSEEEEESEEEEEEEECTTS------------SEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCC------------CEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHH
Confidence 44555566 489985 599999987531 4788877765566 34689999999999998 777776
Q ss_pred HcC
Q psy10285 487 MLK 489 (673)
Q Consensus 487 ~~g 489 (673)
..|
T Consensus 295 ~Sg 297 (504)
T 1n4w_A 295 RAR 297 (504)
T ss_dssp HHH
T ss_pred hcc
Confidence 665
No 236
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.85 E-value=1.1e-05 Score=90.95 Aligned_cols=48 Identities=25% Similarity=0.461 Sum_probs=41.1
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccccccCcCCCCCCCCCCCccccccchh
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFTVNYDLDEDGSNPGDQESSNDKDRIS 162 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 162 (673)
.+||||||||++|+++|+.|+++ |++|+|||++.. +.++|+++.+.+.
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r---G~~V~LlE~~~~------------~~GtS~~s~gli~ 79 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS---GIKTGLIEMQDF------------AEGTSSRSTKLVH 79 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT---TCCEEEECSSST------------TCSGGGSSCSEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC---CCcEEEEeCCCC------------CCCcccccccccc
Confidence 48999999999999999999999 999999999864 5666766666554
No 237
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.85 E-value=4.5e-05 Score=84.57 Aligned_cols=66 Identities=17% Similarity=0.121 Sum_probs=48.1
Q ss_pred HHHHHHHHc-CCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCC---eeEEecCEEEEcCCCC-cHHHH
Q psy10285 412 AVKKKAISL-GAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGE---LKTITFAICVIAAGAY-SGQVA 485 (673)
Q Consensus 412 ~l~~~~~~~-Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~---~~~i~ad~VVlAtG~~-s~~l~ 485 (673)
.++..+++. |++|+. +.|++|..++++ .++++|.+...+|. ..+++|+.||+|+|++ +.+||
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g------------~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL 298 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGS------------GYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLL 298 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSS------------SEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCC------------CEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHH
Confidence 344555555 589984 599999987630 36888777654562 4689999999999998 77787
Q ss_pred HHcC
Q psy10285 486 RMLK 489 (673)
Q Consensus 486 ~~~g 489 (673)
...|
T Consensus 299 ~~Sg 302 (507)
T 1coy_A 299 VSMK 302 (507)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 7666
No 238
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.84 E-value=9.2e-05 Score=82.82 Aligned_cols=61 Identities=18% Similarity=0.193 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHHHcCC--eEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 405 DPWLYLNAVKKKAISLGA--EYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~Gv--~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
....+...+.+.+++.|+ .++ +++|+++..+++ + ..|.|.+.+|+ +++||.||+|+|.++
T Consensus 97 ~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~-------------~--~~w~V~~~~G~--~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 97 TQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE-------------G--LRWTVRTDRGD--EVSARFLVVAAGPLS 159 (549)
T ss_dssp BHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT-------------T--TEEEEEETTCC--EEEEEEEEECCCSEE
T ss_pred CHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC-------------C--CEEEEEECCCC--EEEeCEEEECcCCCC
Confidence 345666777777888887 677 459999987653 1 15778888884 799999999999765
Q ss_pred H
Q psy10285 482 G 482 (673)
Q Consensus 482 ~ 482 (673)
.
T Consensus 160 ~ 160 (549)
T 4ap3_A 160 N 160 (549)
T ss_dssp E
T ss_pred C
Confidence 3
No 239
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.83 E-value=0.00014 Score=79.62 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=32.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||+|++|+.+|..|+ +.|.+|+|+|+.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~---~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAA---QLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHH---HCCCeEEEEeCCCC
Confidence 479999999999999999999 78999999999865
No 240
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.83 E-value=0.00019 Score=78.56 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+.+|..|+ +.|.+|+|+|+.+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~---~~g~~V~liE~~~~ 40 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAA---QLGFKTTCIEKRGA 40 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHH---HHTCCEEEEECSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHH---HCCCeEEEEeCCCC
Confidence 4589999999999999999999 77999999999865
No 241
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.82 E-value=0.00012 Score=81.58 Aligned_cols=62 Identities=19% Similarity=0.135 Sum_probs=47.0
Q ss_pred eCHHHHHHHHHHHHHHcCC--eEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCC
Q psy10285 404 FDPWLYLNAVKKKAISLGA--EYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAY 480 (673)
Q Consensus 404 i~~~~~~~~l~~~~~~~Gv--~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~ 480 (673)
.....+...+.+.+++.|+ .++ +++|+++..+++ + ..|.|.+.+|+ +++||.||+|+|.+
T Consensus 84 ~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~-------------~--~~~~V~~~~G~--~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 84 ITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD-------------E--NLWEVTTDHGE--VYRAKYVVNAVGLL 146 (540)
T ss_dssp EEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETT-------------T--TEEEEEETTSC--EEEEEEEEECCCSC
T ss_pred CCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCC-------------C--CEEEEEEcCCC--EEEeCEEEECCccc
Confidence 3445677777788888888 677 459999987653 1 15778888884 79999999999987
Q ss_pred cH
Q psy10285 481 SG 482 (673)
Q Consensus 481 s~ 482 (673)
+.
T Consensus 147 s~ 148 (540)
T 3gwf_A 147 SA 148 (540)
T ss_dssp CS
T ss_pred cc
Confidence 54
No 242
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.81 E-value=0.00013 Score=79.82 Aligned_cols=36 Identities=33% Similarity=0.490 Sum_probs=33.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|.+|+.+|..|+ +.|.+|+|+|+...
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~---~~g~~V~liE~~~~ 38 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAA---AFGKRVALIESKAL 38 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSCT
T ss_pred ccCcEEEECCCHHHHHHHHHHH---hCCCcEEEEcCCCC
Confidence 3589999999999999999999 78999999999865
No 243
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.81 E-value=9e-05 Score=76.06 Aligned_cols=36 Identities=28% Similarity=0.557 Sum_probs=32.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEE-EecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAV-VDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~-ie~~~~ 281 (673)
..+||+|||+|++|+++|..|+ +.|.+|++ +|+...
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~---~~g~~v~li~e~~~~ 39 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYAT---RGGLKNVVMFEKGMP 39 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHH---HHTCSCEEEECSSST
T ss_pred CCceEEEECCCHHHHHHHHHHH---HCCCCeEEEEeCCCC
Confidence 4579999999999999999999 78999999 999444
No 244
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.81 E-value=0.00016 Score=78.83 Aligned_cols=35 Identities=23% Similarity=0.338 Sum_probs=32.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||+|.+|+.+|..|+ +.|.+|+|+|+...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~---~~g~~V~lie~~~~ 37 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAA---QLGQKVTIVEKGNL 37 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHH---HTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHH---hCCCeEEEEECCCC
Confidence 478999999999999999999 78999999999854
No 245
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.80 E-value=0.00021 Score=78.70 Aligned_cols=35 Identities=37% Similarity=0.517 Sum_probs=32.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 280 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~ 280 (673)
..+||+|||+|++|+.+|..|+ +.|.+|+|||+..
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la---~~G~~V~liEk~~ 42 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAV---LNGARVACLDFVK 42 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHH---HTTCCEEEECCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHH---HCCCEEEEEEecc
Confidence 5689999999999999999999 8899999999643
No 246
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.80 E-value=0.00028 Score=78.49 Aligned_cols=35 Identities=31% Similarity=0.376 Sum_probs=32.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
++||+|||+|.+|..+|..++ +.|.+|+|||+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa---~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAA---AHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHH---TTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHH---HCCCeEEEEecccc
Confidence 589999999999999999999 89999999998664
No 247
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.79 E-value=0.00021 Score=78.27 Aligned_cols=65 Identities=12% Similarity=0.108 Sum_probs=46.0
Q ss_pred eCHHHHHHHHHHHHHHcCCe--EE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCC---CCeeEEecCEEEEcC
Q psy10285 404 FDPWLYLNAVKKKAISLGAE--YV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEK---GELKTITFAICVIAA 477 (673)
Q Consensus 404 i~~~~~~~~l~~~~~~~Gv~--i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~---G~~~~i~ad~VVlAt 477 (673)
.....+...+.+.+++.|++ ++ +++|+.+...++ + ..|.|.+.+ |+..++.+|.||+||
T Consensus 98 ~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~-------------~--~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 98 PPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNED-------------S--QTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp CBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETT-------------T--TEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCC-------------C--CcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 45567777888888888987 77 569999987652 1 134555543 433578999999999
Q ss_pred CCCcHH
Q psy10285 478 GAYSGQ 483 (673)
Q Consensus 478 G~~s~~ 483 (673)
|.++..
T Consensus 163 G~~s~p 168 (464)
T 2xve_A 163 GHFSTP 168 (464)
T ss_dssp CSSSSB
T ss_pred CCCCCC
Confidence 976543
No 248
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.78 E-value=0.00027 Score=77.54 Aligned_cols=36 Identities=22% Similarity=0.328 Sum_probs=33.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+.+|..|+ +.|.+|+|||+.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~---~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAA---QLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH---HTTCCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHH---hCCCeEEEEeCCCC
Confidence 4689999999999999999999 78999999999865
No 249
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.78 E-value=1.6e-05 Score=89.30 Aligned_cols=35 Identities=31% Similarity=0.579 Sum_probs=33.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.|||||||||++|+++|+.|+++ |++|+|||++..
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~---G~~V~LlEk~d~ 52 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVR---GIQTGLVEMNDF 52 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT---TCCEEEEESSST
T ss_pred CCCEEEECCCHHHHHHHHHHHhC---CCcEEEEECCCC
Confidence 59999999999999999999999 999999999864
No 250
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.78 E-value=0.00011 Score=81.08 Aligned_cols=36 Identities=28% Similarity=0.470 Sum_probs=33.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||||++|+++|+.|+ +.|.+|+|+|+...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~---~~g~~v~vlE~~~~ 67 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLA---GAGHQVTVLEASER 67 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHH---HHTCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHH---hCCCeEEEEECCCC
Confidence 4579999999999999999999 78999999999876
No 251
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.77 E-value=2e-05 Score=82.05 Aligned_cols=35 Identities=34% Similarity=0.433 Sum_probs=32.5
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+||+|||||++|+++|+.|++. |++|+|||+...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~---G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA---GHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC---CCcEEEEECCCC
Confidence 37999999999999999999999 999999999753
No 252
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.77 E-value=1.7e-05 Score=86.64 Aligned_cols=38 Identities=18% Similarity=0.383 Sum_probs=35.1
Q ss_pred CCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 97 FPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 97 ~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
++..+||||||||++||++|+.|++. |++|+|+|++..
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~---G~~V~vlE~~~~ 45 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVD---GKKVLHIDKQDH 45 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHC---CCeEEEEeCCCC
Confidence 44569999999999999999999999 999999999876
No 253
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.76 E-value=0.00022 Score=78.05 Aligned_cols=35 Identities=26% Similarity=0.403 Sum_probs=32.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||+|++|+.+|..|+ +.|.+|+|+|+...
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~---~~G~~V~liE~~~~ 37 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAA---QLGLSTAIVEPKYW 37 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHH---HTTCCEEEECSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHH---hCCCeEEEEeCCCC
Confidence 478999999999999999999 78999999999854
No 254
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.76 E-value=1.6e-05 Score=85.49 Aligned_cols=36 Identities=28% Similarity=0.373 Sum_probs=32.6
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.++|||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~---G~~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS---GIDCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC---CCCEEEEeCCC
Confidence 3469999999999999999999999 99999999975
No 255
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.75 E-value=3e-05 Score=83.45 Aligned_cols=37 Identities=24% Similarity=0.347 Sum_probs=31.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
++|+|||||.+|+++|..|+++...|.+|+|||+.+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 5799999999999999999921127899999999876
No 256
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.75 E-value=2.2e-05 Score=87.18 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=34.3
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
...|||||||+|++|+++|+.|+++ |++|+||||...
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~---G~~V~vlEk~~~ 75 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARA---GADVLVLERTSG 75 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC---CCcEEEEeCCCC
Confidence 4569999999999999999999999 999999999874
No 257
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.75 E-value=0.00011 Score=82.31 Aligned_cols=36 Identities=28% Similarity=0.342 Sum_probs=33.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+|++|||+|.+|+.+|..|+ +.|.+|+|||++..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~---~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLS---EAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHH---HTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHH---hCCCeEEEEeCCCC
Confidence 4689999999999999999999 77999999999864
No 258
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.75 E-value=1.6e-05 Score=86.13 Aligned_cols=34 Identities=24% Similarity=0.401 Sum_probs=31.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
|||||||||++|+++|+.|+++ |++|+|||++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~---G~~V~vlE~~~~ 35 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA---GKKVLLLEGGER 35 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc---CCeEEEEecCCC
Confidence 7999999999999999999999 999999998653
No 259
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.74 E-value=0.00012 Score=81.92 Aligned_cols=63 Identities=17% Similarity=0.130 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHHHcCC--eEE-EeceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 405 DPWLYLNAVKKKAISLGA--EYV-RGEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 405 ~~~~~~~~l~~~~~~~Gv--~i~-~~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
....+...+.+.+++.|+ .++ +++|+++..++++ ..|.|++.+| .+++||.||+|+|.++
T Consensus 85 ~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~---------------~~w~V~~~~G--~~~~ad~lV~AtG~~s 147 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEND---------------RLWEVTLDNE--EVVTCRFLISATGPLS 147 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGG---------------TEEEEEETTT--EEEEEEEEEECCCSCB
T ss_pred CHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCC---------------CEEEEEECCC--CEEEeCEEEECcCCCC
Confidence 345566666677777787 676 4689998875531 1577889888 4899999999999876
Q ss_pred HHH
Q psy10285 482 GQV 484 (673)
Q Consensus 482 ~~l 484 (673)
...
T Consensus 148 ~p~ 150 (545)
T 3uox_A 148 ASR 150 (545)
T ss_dssp C--
T ss_pred CCc
Confidence 443
No 260
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.74 E-value=0.0002 Score=78.27 Aligned_cols=35 Identities=26% Similarity=0.375 Sum_probs=32.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||+|++|+++|..|+ +.|.+|+|+|+...
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la---~~G~~V~liEk~~~ 39 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAA---ALGKKVAIAEEFRY 39 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHH---TTTCCEEEEESSCT
T ss_pred CCcEEEECcCHHHHHHHHHHH---hCCCEEEEEeCCCC
Confidence 589999999999999999999 88999999999555
No 261
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.74 E-value=0.0002 Score=78.91 Aligned_cols=36 Identities=28% Similarity=0.364 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|..|+ +.|.+|+|+|+...
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la---~~G~~V~liEk~~~ 60 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAG---ALGKRVAIAEEYRI 60 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHH---hCcCEEEEEeCCCC
Confidence 3589999999999999999999 88999999999655
No 262
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.73 E-value=2.7e-05 Score=85.09 Aligned_cols=35 Identities=23% Similarity=0.522 Sum_probs=32.5
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCC------ceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDG------CRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g------~~v~vie~~~~ 137 (673)
.+||+|||||++||++|++|++. | ++|+|+|+...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~---G~~~~~~~~V~vlEa~~~ 45 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE---IKEKNLPLELTLVEASPR 45 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH---HTTTTCSEEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHh---ccccCCCCCEEEEECCCC
Confidence 48999999999999999999999 8 99999999754
No 263
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.73 E-value=1.9e-05 Score=84.92 Aligned_cols=38 Identities=24% Similarity=0.550 Sum_probs=33.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||||||||++|+++|++|+++ .+|++|+|||++..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~-~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQL-APGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH-CTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhc-CCCCeEEEEeCCCC
Confidence 358999999999999999999987 24689999999763
No 264
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.73 E-value=0.00013 Score=80.26 Aligned_cols=36 Identities=36% Similarity=0.590 Sum_probs=32.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|.+|+.+|..|+ +.|.+|+|||+.+.
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~---~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAA---DEGLKVAIVERYKT 40 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHH---hCCCeEEEEeCCCC
Confidence 3589999999999999999999 78999999999655
No 265
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.00014 Score=79.87 Aligned_cols=36 Identities=31% Similarity=0.422 Sum_probs=33.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||||.+|+.+|..|+ +.|.+|+|||+...
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~---~~g~~V~liE~~~~ 45 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAA---SYGAKTLLVEAKAL 45 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHH---HTSCCEEEEESSCT
T ss_pred ccCCEEEEcCCHHHHHHHHHHH---HCCCcEEEEeCCCc
Confidence 4689999999999999999999 78999999999865
No 266
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.72 E-value=1.8e-05 Score=84.37 Aligned_cols=35 Identities=26% Similarity=0.551 Sum_probs=33.0
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+|||||||||++|+++|+.|++. |++|+|||++..
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~---G~~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY---GLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC---CCCEEEEeCCCC
Confidence 58999999999999999999999 999999999863
No 267
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.71 E-value=0.0001 Score=80.75 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=32.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||+|++|+.+|..|+ +.|.+|+|||+...
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~---~~G~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLA---KAKYNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHH---HTTCCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHH---hCCCeEEEEECCCC
Confidence 589999999999999999999 88999999997665
No 268
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.69 E-value=2.1e-05 Score=84.53 Aligned_cols=36 Identities=31% Similarity=0.330 Sum_probs=33.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+|||+|||||++|+++|+.|+++ |++|+|||+...
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~---G~~V~vlEk~~~ 38 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKL---GKSVTVFDNGKK 38 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhC---CCCEEEEeCCCC
Confidence 358999999999999999999999 999999999763
No 269
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.69 E-value=0.00019 Score=78.79 Aligned_cols=36 Identities=36% Similarity=0.403 Sum_probs=33.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+.+|..|+ +.|.+|+|||+...
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la---~~G~~V~liE~~~~ 54 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAA---ELGARAAVVESHKL 54 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHH---HTTCCEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHH---hCCCeEEEEecCCC
Confidence 4689999999999999999999 78999999998766
No 270
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.69 E-value=0.00049 Score=74.96 Aligned_cols=36 Identities=25% Similarity=0.376 Sum_probs=33.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|.+|+.+|..|+ +.|.+|+|+|+...
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~---~~g~~V~liE~~~~ 38 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAA---MYGQKCALIEAKEL 38 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHH---TTTCCEEEEESSCT
T ss_pred ccCCEEEECCCHHHHHHHHHHH---hCCCeEEEEcCCCC
Confidence 3589999999999999999999 88999999999855
No 271
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.68 E-value=2.3e-05 Score=84.56 Aligned_cols=37 Identities=35% Similarity=0.496 Sum_probs=32.5
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+..+||||||||++|+++|+.|++. |.+|+|||+...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~---G~~V~llEk~~~ 61 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKR---GRRVLVIDHARA 61 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC---CCcEEEEeCCCC
Confidence 3458999999999999999999999 999999999864
No 272
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.66 E-value=2.4e-05 Score=84.33 Aligned_cols=35 Identities=31% Similarity=0.656 Sum_probs=32.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
++||||||||++|+++|+.|++. |++|+|||++..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~---G~~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKS---GFKVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT---TCCEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHhC---CCCEEEEeCCCC
Confidence 48999999999999999999999 999999999853
No 273
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.65 E-value=2.9e-05 Score=83.71 Aligned_cols=34 Identities=26% Similarity=0.308 Sum_probs=32.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+||||||||++||++|++|+++ |++|+|+|++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~---G~~V~vlE~~~~ 34 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA---GHEVEVFERLPI 34 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC---CCceEEEeCCCC
Confidence 5899999999999999999999 999999999864
No 274
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.65 E-value=3.3e-05 Score=76.32 Aligned_cols=34 Identities=29% Similarity=0.699 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
+|||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~---g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK---GVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT---TCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHC---CCCEEEEecCC
Confidence 48999999999999999999999 99999999974
No 275
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.65 E-value=0.00018 Score=80.08 Aligned_cols=60 Identities=12% Similarity=0.119 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHcCCeEEEe-ceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCc
Q psy10285 406 PWLYLNAVKKKAISLGAEYVRG-EVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYS 481 (673)
Q Consensus 406 ~~~~~~~l~~~~~~~Gv~i~~~-~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s 481 (673)
+..+...+.+.+++.|++++.+ +|+.+..+.+. + ..+.|.+.+| .++++|.||+|||.+.
T Consensus 266 ~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~------------~--~~~~V~~~~g--~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 266 GQKLAGALKAHVSDYDVDVIDSQSASKLVPAATE------------G--GLHQIETASG--AVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHHHHHHHHTSCEEEECSCCEEEEECCSST------------T--SCEEEEETTS--CEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCC------------C--ceEEEEECCC--CEEEcCEEEECCCCCc
Confidence 3456666777788889999965 99999754210 0 1456778888 4899999999999754
No 276
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.64 E-value=0.00029 Score=77.07 Aligned_cols=36 Identities=22% Similarity=0.389 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|..|+ +.|.+|+|||+...
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~---~~g~~V~lie~~~~ 38 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAV---EQGAQVTLIERGTI 38 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH---HTTCEEEEEESSST
T ss_pred CcCCEEEECCCHHHHHHHHHHH---HCCCEEEEEeCCCC
Confidence 3579999999999999999999 78999999999855
No 277
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.61 E-value=0.00053 Score=75.00 Aligned_cols=35 Identities=26% Similarity=0.298 Sum_probs=32.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||+|.+|+.+|..|+ +.|.+|+|+|+.+.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~---~~g~~V~lie~~~~ 40 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAA---QLGLKVLAVEAGEV 40 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSCT
T ss_pred cCCEEEECcCHHHHHHHHHHH---HCCCeEEEEeCCCC
Confidence 489999999999999999999 78999999999876
No 278
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.61 E-value=3.5e-05 Score=82.26 Aligned_cols=34 Identities=21% Similarity=0.471 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
++||+|||||++|+++|+.|++. |++|+|+|+..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~---G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA---GIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH---TCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHC---CCCEEEEeCCC
Confidence 48999999999999999999999 99999999875
No 279
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.61 E-value=3.6e-05 Score=76.22 Aligned_cols=35 Identities=34% Similarity=0.423 Sum_probs=32.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..||+|||||++|+++|+.|+ +.|.+|+|+||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La---~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALT---AAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHH---HTTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHH---HCCCCEEEEECCCC
Confidence 478999999999999999999 89999999999876
No 280
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.61 E-value=6.2e-05 Score=82.58 Aligned_cols=35 Identities=20% Similarity=0.452 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCC--ceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDG--CRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g--~~v~vie~~~~ 137 (673)
.+||+|||||++||++|++|++. | ++|+|+|++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~---g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA---FPDLNITLLEAGER 40 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH---CTTSEEEEECSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh---CCCCCEEEEECCCC
Confidence 47999999999999999999999 8 99999999654
No 281
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.60 E-value=3.5e-05 Score=82.93 Aligned_cols=34 Identities=32% Similarity=0.481 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCce-EEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCR-VAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~-v~vie~~~ 136 (673)
.+||+|||||++|+++|+.|++. |++ |+|||+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~---G~~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA---GIGKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCSEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC---CCCeEEEEECCC
Confidence 48999999999999999999999 999 99999975
No 282
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.60 E-value=3.6e-05 Score=83.94 Aligned_cols=39 Identities=23% Similarity=0.419 Sum_probs=35.4
Q ss_pred CCCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 96 LFPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 96 ~~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.++..|||||||+|++|+++|+.|++. |++|+|+|++..
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~---g~~v~~~e~~~~ 54 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHY---GKKILVLDRNPY 54 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHC---CCcEEEEeccCC
Confidence 456679999999999999999999999 999999999875
No 283
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.60 E-value=4.6e-05 Score=82.23 Aligned_cols=34 Identities=18% Similarity=0.425 Sum_probs=31.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.||||||||++||++|++|++. |++|+|+|++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~---G~~V~vlE~~~~ 34 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARN---GHEIIVLEKSAM 34 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHC---CCeEEEEeCCCC
Confidence 3899999999999999999999 999999999764
No 284
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.59 E-value=0.00026 Score=78.23 Aligned_cols=35 Identities=29% Similarity=0.445 Sum_probs=32.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||+|.+|+.+|..|+ +.|.+|+|+|+...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~---~~g~~V~liE~~~~ 36 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAA---RHNAKVALVEKSRL 36 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHH---HTTCCEEEEESSST
T ss_pred ccCEEEECCCHHHHHHHHHHH---HCCCcEEEEeCCCc
Confidence 479999999999999999999 78999999999865
No 285
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.59 E-value=4.3e-05 Score=84.58 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=34.9
Q ss_pred CCCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 96 LFPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 96 ~~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..++.+||+|||||++|+++|+.|++. |++|+|||+...
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~---G~~v~vlE~~~~ 45 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLA---GVEVVVLERLVE 45 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHT---TCCEEEEESCCC
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEeCCCC
Confidence 455679999999999999999999999 999999999764
No 286
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.58 E-value=8.3e-05 Score=80.21 Aligned_cols=36 Identities=22% Similarity=0.470 Sum_probs=33.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCC-ceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDG-CRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g-~~v~vie~~~~ 137 (673)
+.+||+|||||++||++|+.|++. | ++|+|+|++..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~---g~~~v~v~E~~~~ 41 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA---GFHDYTILERTDH 41 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT---TCCCEEEECSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC---CCCcEEEEECCCC
Confidence 458999999999999999999999 9 89999999764
No 287
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.58 E-value=4.1e-05 Score=83.52 Aligned_cols=36 Identities=33% Similarity=0.560 Sum_probs=33.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+.|||||||||++|+++|+.|++. |.+|+|||+...
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~---G~~V~llEk~~~ 60 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEE---GANVLLLDKGNK 60 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC---CCCEEEEECCCC
Confidence 358999999999999999999999 999999998763
No 288
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.57 E-value=3.1e-05 Score=84.19 Aligned_cols=38 Identities=26% Similarity=0.440 Sum_probs=32.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++|+|||||.+|+++|..|+++...+.+|+|||+.+.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 36899999999999999999921227899999999876
No 289
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.57 E-value=5.5e-05 Score=85.09 Aligned_cols=37 Identities=24% Similarity=0.455 Sum_probs=34.2
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
...+||||||||++|+++|+.|++. |++|+|||+...
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~---G~~V~vlEk~~~ 155 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKA---GANVILVDKAPF 155 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHH---TCCEEEECSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC---CCcEEEEeCCCC
Confidence 3569999999999999999999999 999999999874
No 290
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.57 E-value=4.4e-05 Score=86.13 Aligned_cols=36 Identities=31% Similarity=0.501 Sum_probs=33.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+.+||||||||++|+++|+.|++. |++|+|||+...
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~---G~~V~LiEr~~~ 57 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKL---GHDVTIYERSAF 57 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHcC---CCCEEEEcCCCC
Confidence 358999999999999999999999 999999999864
No 291
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.57 E-value=2.6e-05 Score=85.15 Aligned_cols=36 Identities=42% Similarity=0.659 Sum_probs=33.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.++||+|||||++|+++|+.|++. |++|+|||+...
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~---G~~V~vlE~~~~ 40 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRR---GLKILLVDSKPW 40 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSS---SCCEEEECSSCG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC---CCCEEEEECCCC
Confidence 458999999999999999999999 999999999753
No 292
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.56 E-value=6.5e-05 Score=83.04 Aligned_cols=38 Identities=26% Similarity=0.424 Sum_probs=33.1
Q ss_pred CCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 97 FPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 97 ~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
|.+.+||+|||||++||++|+.|++. |++|+|+|+...
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~---g~~v~v~E~~~~ 47 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIH---GLNVTVFEAEGK 47 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTT---SCEEEEECSSSS
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHC---CCcEEEEEeCCC
Confidence 44568999999999999999999999 999999999864
No 293
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.55 E-value=5.1e-05 Score=81.30 Aligned_cols=35 Identities=34% Similarity=0.706 Sum_probs=32.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..+||+|||||++|+++|+.|++. |++|+|+|+..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~---G~~v~v~E~~~ 59 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN---GIDVSVYERDN 59 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT---TCEEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC---CCCEEEEeCCC
Confidence 458999999999999999999999 99999999975
No 294
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.55 E-value=3.6e-05 Score=84.99 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+|||||||++||+||++|++. |++|+|+|++..
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~---G~~V~VlEa~~~ 35 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA---GIPVLLLEQRDK 35 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT---TCCEEEECCC--
T ss_pred CCEEEECCcHHHHHHHHHHHHC---CCcEEEEccCCC
Confidence 3799999999999999999999 999999999875
No 295
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.54 E-value=0.00025 Score=77.77 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=31.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCC-eEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~-~v~~ie~~~~ 281 (673)
..++|+|||+|++|+.+|+.|+ +.|. +|+|+|+...
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~---~~g~~~v~~~e~~~~ 39 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLS---EAGITDLLILEATDH 39 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHH---HTTCCCEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHH---hcCCCceEEEeCCCC
Confidence 4578999999999999999999 7888 8999999876
No 296
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.53 E-value=4.9e-05 Score=83.33 Aligned_cols=34 Identities=24% Similarity=0.615 Sum_probs=31.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCc--eEEEEecccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGC--RVAVVDRDFT 137 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~--~v~vie~~~~ 137 (673)
+||+|||||++||++|++|++. |. +|+|+|+...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~---G~~~~V~vlEa~~~ 38 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA---PCPPKVVLVESSER 38 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS---SSCCEEEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC---CCCCcEEEEeCCCC
Confidence 6999999999999999999999 98 9999999764
No 297
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.52 E-value=1.9e-05 Score=85.78 Aligned_cols=36 Identities=19% Similarity=0.490 Sum_probs=31.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
++|+|||||.+|+++|..|. +.....+|+|||+.+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~-~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLR-NLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHH-HHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHh-ccCcCCeEEEEcCCCC
Confidence 57999999999999999998 3234589999999876
No 298
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.52 E-value=5.3e-05 Score=81.07 Aligned_cols=34 Identities=41% Similarity=0.725 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.+||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~---G~~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ---GHRVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC---CCcEEEEeCCC
Confidence 58999999999999999999999 99999999975
No 299
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.52 E-value=6e-05 Score=83.82 Aligned_cols=36 Identities=25% Similarity=0.550 Sum_probs=33.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||||||||++||++|+.|++. |++|+|+|++..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~---G~~V~vlE~~~~ 38 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS---GLNVVVLEARDR 38 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC---CCCEEEEeCCCC
Confidence 357999999999999999999999 999999999764
No 300
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.52 E-value=0.00063 Score=77.19 Aligned_cols=61 Identities=18% Similarity=0.172 Sum_probs=45.8
Q ss_pred cCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEc-CCCCeeEEecCEEEEcCCCC-cHHHHHHcCCCC
Q psy10285 420 LGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRD-EKGELKTITFAICVIAAGAY-SGQVARMLKIGD 492 (673)
Q Consensus 420 ~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t-~~G~~~~i~ad~VVlAtG~~-s~~l~~~~g~~~ 492 (673)
.|++|+. +.|++|..++++ +++.++.+.. .+|+..++.||.||+|+|.. +.+++...|+..
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~------------~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~ 336 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALN------------SEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQ 336 (623)
T ss_dssp EEEEEECSEEEEEEEECTTS------------SCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSC
T ss_pred CCEEEEeCCEEEEEEEECCC------------CEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCc
Confidence 4889985 599999876531 4788987775 46766789999999999976 456776666643
No 301
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.51 E-value=5.4e-05 Score=85.11 Aligned_cols=36 Identities=22% Similarity=0.494 Sum_probs=31.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+.|||||||||++|+++|+.|++. |++|+|||+...
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~---G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG---GVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT---TCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEcCCCC
Confidence 468999999999999999999999 999999999764
No 302
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.51 E-value=0.00072 Score=73.66 Aligned_cols=34 Identities=32% Similarity=0.453 Sum_probs=31.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+||+|||+|++|+++|..|+ +.|.+|+|+|+.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~---~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAA---QLGMKVGVVEKEKA 35 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHH---HTTCCEEEEESSSS
T ss_pred CCEEEECCChhHHHHHHHHH---HCCCeEEEEeCCCC
Confidence 68999999999999999999 78999999999865
No 303
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.51 E-value=0.00069 Score=74.63 Aligned_cols=33 Identities=30% Similarity=0.432 Sum_probs=30.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhcc-CCCeEEEEec
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVL-DGCRVAVVDR 278 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~-~g~~v~~ie~ 278 (673)
..+||+|||||++|+++|..|+ + .|.+|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la---~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAA---SLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHH---HHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHH---HHcCCEEEEEec
Confidence 3589999999999999999999 7 8999999993
No 304
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.51 E-value=7.5e-05 Score=84.07 Aligned_cols=36 Identities=25% Similarity=0.556 Sum_probs=33.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||||||||++|+++|+.|++. |++|+|||+...
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~---G~~V~vlEk~~~ 160 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDS---GAKVILIEKEPV 160 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC---CCcEEEEeCCCC
Confidence 468999999999999999999999 999999999864
No 305
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.50 E-value=6.7e-05 Score=80.30 Aligned_cols=34 Identities=26% Similarity=0.484 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.+||+|||||++|+++|+.|++. |++|+|+|+..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~---G~~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA---GVDVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT---TCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhC---CCCEEEEecCC
Confidence 48999999999999999999999 99999999875
No 306
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.50 E-value=5.3e-05 Score=84.11 Aligned_cols=36 Identities=36% Similarity=0.708 Sum_probs=33.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.++||||||||++|+++|+.|++. |++|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~---G~~V~liE~~~~ 41 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMR---GHRVLLLEREAF 41 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT---TCCEEEECSSCS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC---CCCEEEEccCCC
Confidence 458999999999999999999999 999999999863
No 307
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.49 E-value=7.8e-05 Score=81.77 Aligned_cols=36 Identities=19% Similarity=0.533 Sum_probs=32.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||+|||||++||++|+.|++. |++|+|+|+...
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~---g~~v~v~E~~~~ 50 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSR---GTDAVLLESSAR 50 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTT---TCCEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC---CCCEEEEEcCCC
Confidence 458999999999999999999999 999999999864
No 308
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.48 E-value=5.5e-05 Score=79.14 Aligned_cols=33 Identities=30% Similarity=0.434 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHH---hcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKE---KVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~---~~~~g~~v~vie~~~ 136 (673)
+||+|||||++|+++|+.|++ . |++|+|+||..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~---G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG---PLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C---CEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC---CceEEEEECCC
Confidence 599999999999999999999 7 99999999975
No 309
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.48 E-value=6.7e-05 Score=79.75 Aligned_cols=35 Identities=23% Similarity=0.352 Sum_probs=32.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+||+|||||++|+++|+.|++. |++|+|||+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~---G~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN---GWDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC---CCCEEEEecCCC
Confidence 48999999999999999999999 999999999753
No 310
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.47 E-value=6.5e-05 Score=84.75 Aligned_cols=36 Identities=28% Similarity=0.499 Sum_probs=33.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||||||||++|+++|+.|++. |++|+||||...
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~---G~~V~vlEK~~~ 41 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQS---GQTCALLSKVFP 41 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSCG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC---CCcEEEEecCCC
Confidence 468999999999999999999999 999999999864
No 311
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.47 E-value=6.8e-05 Score=82.95 Aligned_cols=38 Identities=18% Similarity=0.347 Sum_probs=33.6
Q ss_pred CCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 97 FPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 97 ~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
....+||+|||||++|+++|+.|++. |++|+|||+...
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~---G~~v~vlE~~~~ 46 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLG---GVDVMVLEQLPQ 46 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESCSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEECCCC
Confidence 34569999999999999999999999 999999999764
No 312
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.47 E-value=7e-05 Score=76.35 Aligned_cols=35 Identities=29% Similarity=0.623 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.|||+|||||++|+++|+.|++.. |++|+|||+..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~--G~~V~viEk~~ 73 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNP--NVQVAIIEQSV 73 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTST--TSCEEEEESSS
T ss_pred ccCEEEECccHHHHHHHHHHHHcC--CCeEEEEECCC
Confidence 589999999999999999999832 89999999975
No 313
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.46 E-value=7e-05 Score=83.19 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=33.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCC-ceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDG-CRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g-~~v~vie~~~~ 137 (673)
+.+||||||||++||+||+.|++. | ++|+|+|++..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~---G~~~V~VlEa~~r 43 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN---GIQDCLVLEARDR 43 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT---TCCSEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc---CCCCEEEEeCCCC
Confidence 458999999999999999999999 9 99999999764
No 314
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.46 E-value=0.00041 Score=76.55 Aligned_cols=33 Identities=36% Similarity=0.506 Sum_probs=30.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhcc-CCCeEEEEec
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVL-DGCRVAVVDR 278 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~-~g~~v~~ie~ 278 (673)
..+||+|||||++|+.+|..|+ + .|.+|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la---~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAA---TLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH---HHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHH---HhcCCeEEEEec
Confidence 3589999999999999999999 7 8999999994
No 315
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.46 E-value=8.9e-05 Score=81.64 Aligned_cols=38 Identities=21% Similarity=0.489 Sum_probs=34.4
Q ss_pred CCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 97 FPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 97 ~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+++.+||+|||||++||++|+.|++. |.+|+|+|+...
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~---g~~v~v~E~~~~ 45 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKA---GYKVTVLEARTR 45 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHC---CCCEEEEeccCC
Confidence 34568999999999999999999999 999999999864
No 316
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.45 E-value=8.3e-05 Score=79.40 Aligned_cols=37 Identities=38% Similarity=0.517 Sum_probs=33.8
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
...+||+|||||++|+++|+.|++. |++|+|+|+...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~---g~~v~v~E~~~~ 63 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS---GQRVLIVDRRPH 63 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC---CCceEEEeccCC
Confidence 3569999999999999999999999 999999998753
No 317
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.45 E-value=7.2e-05 Score=83.52 Aligned_cols=36 Identities=42% Similarity=0.663 Sum_probs=33.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.++||+|||||++|+++|+.|++. |.+|+|||++..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~---G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ---GVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT---TCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC---CCCEEEEeCCCC
Confidence 358999999999999999999999 999999999863
No 318
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.44 E-value=8.7e-05 Score=78.60 Aligned_cols=37 Identities=22% Similarity=0.387 Sum_probs=33.7
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecc-cc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRD-FT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~-~~ 137 (673)
+..+||+|||||++||++|+.|++. |++|+|+|+. ..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~---G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA---GHDVTILEANANR 79 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT---SCEEEEECSCSSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC---CCcEEEEeccccc
Confidence 4468999999999999999999999 9999999997 53
No 319
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.44 E-value=0.00048 Score=75.11 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=32.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCC-----CeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDG-----CRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g-----~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|..|+ +.| .+|+|||+.+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~---~~g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQ---ERAQAQGALEVLFLDKQGD 69 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHH---HHHHHHCCCCEEEEESCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHH---hcccccCcccEEEEecCCC
Confidence 3579999999999999999999 677 89999999887
No 320
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.43 E-value=9.4e-05 Score=77.00 Aligned_cols=37 Identities=30% Similarity=0.560 Sum_probs=32.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|||+|||||++|+++|+.|+++ ..|++|+|||+..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~-~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTL-RPDLRITIVEAGV 114 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHH-CTTSCEEEEESSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhc-CCCCEEEEEeCCC
Confidence 358999999999999999999995 2289999999875
No 321
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.43 E-value=9.1e-05 Score=80.64 Aligned_cols=36 Identities=28% Similarity=0.440 Sum_probs=33.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.++||+|||||++||++|+.|++. |++|+|+|++..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~---g~~v~v~E~~~~ 39 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA---GLSVAVIEARDR 39 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC---CCcEEEEECCCC
Confidence 358999999999999999999999 999999999764
No 322
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.43 E-value=7.1e-05 Score=81.16 Aligned_cols=35 Identities=23% Similarity=0.409 Sum_probs=31.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
+.+||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~---G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH---DVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT---TCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC---CCeEEEEcCCC
Confidence 347999999999999999999999 99999999875
No 323
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.43 E-value=7.8e-05 Score=84.42 Aligned_cols=36 Identities=28% Similarity=0.511 Sum_probs=33.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||||||||++|+++|+.|++. |.+|+||||...
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~---G~~V~vlEK~~~ 52 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEA---GFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSCG
T ss_pred ccCCEEEECccHHHHHHHHHHHHC---CCcEEEEeccCC
Confidence 458999999999999999999999 999999999764
No 324
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.42 E-value=0.0012 Score=70.38 Aligned_cols=57 Identities=14% Similarity=0.108 Sum_probs=42.6
Q ss_pred HHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHHHHHHcCC
Q psy10285 415 KKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQVARMLKI 490 (673)
Q Consensus 415 ~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~l~~~~g~ 490 (673)
+.+++.|++++. ..+..++.+.+ ...|.+.+|+ ++.+|.||+|+|.....++...++
T Consensus 210 ~~l~~~gi~v~~~~~v~~v~~~~~-----------------~~~v~~~~g~--~i~~D~vi~~~g~~~~~~~~~~gl 267 (401)
T 3vrd_B 210 FGTENALIEWHPGPDAAVVKTDTE-----------------AMTVETSFGE--TFKAAVINLIPPQRAGKIAQSASL 267 (401)
T ss_dssp TTSTTCSEEEECTTTTCEEEEETT-----------------TTEEEETTSC--EEECSEEEECCCEEECHHHHHTTC
T ss_pred HHHHhcCcEEEeCceEEEEEeccc-----------------ceEEEcCCCc--EEEeeEEEEecCcCCchhHhhccc
Confidence 334567899985 47888876653 3347888884 899999999999877777776654
No 325
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.42 E-value=7.4e-05 Score=85.24 Aligned_cols=36 Identities=31% Similarity=0.352 Sum_probs=33.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||||||||++|+++|+.|++. |++|+||||...
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~---G~~V~vlEK~~~ 39 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQK---GLSTIVLSLIPV 39 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTT---TCCEEEECSSCG
T ss_pred ccccEEEECchHHHHHHHHHHHHC---CCcEEEEeccCC
Confidence 358999999999999999999999 999999999764
No 326
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.42 E-value=9.4e-05 Score=82.63 Aligned_cols=35 Identities=20% Similarity=0.460 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHHH---hcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKE---KVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~---~~~~g~~v~vie~~~~ 137 (673)
.+||||||||++|+++|+.|++ . |++|+|||+...
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~---G~~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQ---QANITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCS---SCEEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCC---CCEEEEECCCCC
Confidence 4899999999999999999999 7 999999999753
No 327
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.42 E-value=0.0001 Score=69.31 Aligned_cols=33 Identities=36% Similarity=0.667 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
||++|||||++|+.+|..|++. |.+|+|||+..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~---g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA---GLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT---TCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC---CCcEEEEeCCC
Confidence 7999999999999999999999 99999999875
No 328
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.41 E-value=6.7e-05 Score=83.21 Aligned_cols=34 Identities=26% Similarity=0.489 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHH---hcCCCceEEEEecccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKE---KVLDGCRVAVVDRDFT 137 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~---~~~~g~~v~vie~~~~ 137 (673)
+||||||||++|+++|+.|++ . |++|+|||+...
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~---G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDD---RIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGG---GSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCC---CCEEEEEecCCC
Confidence 799999999999999999999 8 999999999753
No 329
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.40 E-value=9.4e-05 Score=83.29 Aligned_cols=35 Identities=26% Similarity=0.505 Sum_probs=32.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.+|||||||||+||+++|+.|++. |++|+|||+..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~---G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM---GQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhC---CCCEEEEeecc
Confidence 459999999999999999999999 99999999874
No 330
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.40 E-value=0.0011 Score=74.99 Aligned_cols=34 Identities=29% Similarity=0.411 Sum_probs=31.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRD 279 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~ 279 (673)
..+||+|||+|++|+.+|..|+ +.|.+|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~---~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAA---KYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHH---HTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHH---hCCCeEEEEecc
Confidence 4589999999999999999999 789999999984
No 331
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.39 E-value=0.0012 Score=72.87 Aligned_cols=35 Identities=26% Similarity=0.332 Sum_probs=32.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||+|++|+.+|..|+ +.|.+|+|||+.+.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la---~~G~~V~liE~~~~ 42 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAK---KHTDKVVLIEGGAY 42 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHH---TTCSCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHH---hCCCcEEEEeCCCC
Confidence 489999999999999999999 88999999999876
No 332
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.37 E-value=0.00012 Score=78.38 Aligned_cols=38 Identities=26% Similarity=0.476 Sum_probs=33.4
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..++||+|||||++||++|+.|++.. |++|+|+|++..
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~--g~~v~v~E~~~~ 42 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQL--DKRVLVLERRPH 42 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHS--CCCEEEECSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhC--CCCEEEEeCCCC
Confidence 34689999999999999999999973 689999999864
No 333
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.37 E-value=0.00011 Score=81.93 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=33.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||||||||++|+++|+.|++. |++|+|||+...
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~---G~kV~VlEr~~~ 141 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQM---GFNPIIVERGKE 141 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHT---TCCCEEECSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC---CCeEEEEEccCc
Confidence 358999999999999999999999 999999999753
No 334
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.36 E-value=0.00018 Score=78.31 Aligned_cols=36 Identities=6% Similarity=0.126 Sum_probs=31.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+||+|||+|.+|+.+|..|++ ...+.+|+|||+.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~-~~~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLN-LHPDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-HCTTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH-hCcCCeEEEEECCCc
Confidence 479999999999999999982 123899999999876
No 335
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.36 E-value=0.00015 Score=78.67 Aligned_cols=38 Identities=18% Similarity=0.361 Sum_probs=34.8
Q ss_pred CCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 97 FPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 97 ~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
|+..+||+|||+|++|+++|+.|++. |++|+|+|++..
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~---g~~v~~~e~~~~ 40 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVN---GKKVLHMDRNPY 40 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHC---CCcEEEEecCCC
Confidence 45568999999999999999999999 999999999865
No 336
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.34 E-value=0.00012 Score=82.06 Aligned_cols=36 Identities=28% Similarity=0.504 Sum_probs=33.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||+|||||++|+++|+.|++. |.+|+|||+...
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~---G~~V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR---QVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC---CCCEEEEeCCCC
Confidence 458999999999999999999999 999999999753
No 337
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.34 E-value=0.00013 Score=83.20 Aligned_cols=37 Identities=30% Similarity=0.558 Sum_probs=33.8
Q ss_pred CccccEEEECCChHHHHHHHHHHH-hcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKE-KVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~-~~~~g~~v~vie~~~~ 137 (673)
+..+||+|||||++||++|+.|++ . |++|+|||+...
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~---G~~V~viEr~~~ 67 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFP---DIRTCIVEQKEG 67 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCT---TSCEEEECSSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhC---CCCEEEEeCCCC
Confidence 346899999999999999999999 9 999999999763
No 338
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.33 E-value=0.00013 Score=81.91 Aligned_cols=35 Identities=26% Similarity=0.441 Sum_probs=32.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.+|||||||||+||+++|+.|++. |++|+|||+..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~---G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM---GAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT---TCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC---CCCEEEEEecc
Confidence 359999999999999999999999 99999999874
No 339
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.33 E-value=0.00013 Score=77.97 Aligned_cols=33 Identities=27% Similarity=0.520 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.+|+|||||++||++|+.|++. |++|+|+||+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~---G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH---GIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCCEEEEecCC
Confidence 3799999999999999999999 99999999975
No 340
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.32 E-value=0.00014 Score=81.36 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHHH---hcCCCceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKE---KVLDGCRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~---~~~~g~~v~vie~~~ 136 (673)
.+||||||||++|+++|+.|++ . |.+|+|||+..
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~---G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQG---TADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTT---SSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCC---CCcEEEEeCCC
Confidence 5899999999999999999999 7 99999999975
No 341
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.32 E-value=0.00013 Score=82.18 Aligned_cols=35 Identities=20% Similarity=0.480 Sum_probs=32.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.+|||||||||++|+++|+.|++. |.+|+|||+..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~---G~kVlLIEk~~ 54 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARG---GLHCLLITSDL 54 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESCG
T ss_pred CcCCEEEECccHHHHHHHHHHHHC---CCcEEEEEecc
Confidence 359999999999999999999999 99999999874
No 342
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.31 E-value=4.4e-05 Score=82.74 Aligned_cols=36 Identities=19% Similarity=0.491 Sum_probs=31.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
++|+|||||++|+++|..|++ +..+.+|+|||+.+.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~-~~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRN-LMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-HCTTCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHc-CCCCCeEEEECCCCC
Confidence 689999999999999999992 227899999999877
No 343
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.31 E-value=0.00048 Score=75.46 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=30.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++|+|||+|++|+++|..|+++ ..+.+|+|+|+.+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~-~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL-DPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH-CTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhh-CcCCCEEEEECCCc
Confidence 36899999999999999999821 33899999999887
No 344
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.31 E-value=0.00013 Score=77.27 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=32.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+||+|||||++|+++|+.|++. |++|+|+|++..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~---g~~v~v~E~~~~ 35 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL---NKKVLVIEKRNH 35 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG---TCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC---CCcEEEEecCCC
Confidence 7999999999999999999999 999999999753
No 345
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.30 E-value=0.00017 Score=79.75 Aligned_cols=35 Identities=29% Similarity=0.489 Sum_probs=32.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..+||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~---G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALL---GARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT---TCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHHC---CCeEEEEEecc
Confidence 458999999999999999999999 99999999875
No 346
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.30 E-value=0.00017 Score=79.60 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=32.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
++||+|||||++||++|+.|++. |++|+|+|+...
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~---g~~v~v~E~~~~ 73 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVA---GFKTLLLEARDR 73 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT---TCCEEEECSSSB
T ss_pred CCCEEEECCcHHHHHHHHHHHHC---CCCEEEEeCCCC
Confidence 38999999999999999999999 999999999865
No 347
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.29 E-value=0.001 Score=72.53 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=32.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|.+|+++|..|+ +.|.+|+|+|+...
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~---~~g~~V~lie~~~~ 39 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAG---QLGIPTVLVEGQAL 39 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHH---HHTCCEEEECSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHH---HCCCEEEEEccCCC
Confidence 3579999999999999999999 77999999999555
No 348
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.26 E-value=0.00018 Score=76.78 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=33.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+..+|+|||+|.+|+++|..|. ..+.+|+|+|+.+.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~---~~~~~itlie~~~~ 43 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL---GKCDDITMINSEKY 43 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT---TTCSCEEEECSSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHh---CCCCEEEEEECCCC
Confidence 4578999999999999999997 88999999999887
No 349
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.25 E-value=0.00085 Score=72.62 Aligned_cols=35 Identities=20% Similarity=0.472 Sum_probs=31.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCC--eEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGC--RVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~--~v~~ie~~~~ 281 (673)
.+||+|||+|.+|+++|..|+ +.|. +|+++|+.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~---~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLR---ASGWEGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHH---HTTCCSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHH---ccCcCCCEEEEECCCC
Confidence 478999999999999999999 6776 8999998765
No 350
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.25 E-value=0.00012 Score=83.41 Aligned_cols=36 Identities=39% Similarity=0.631 Sum_probs=32.9
Q ss_pred ccccEEEECCChHHHHHHHHHH---H-hcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIK---E-KVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~---~-~~~~g~~v~vie~~~~ 137 (673)
..+||||||||++||++|+.|+ + . |.+|+||||...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~---G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLG---GLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTT---TCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhC---CCeEEEEeCcCC
Confidence 4689999999999999999999 5 7 999999999864
No 351
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.24 E-value=0.00017 Score=81.83 Aligned_cols=36 Identities=31% Similarity=0.480 Sum_probs=33.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..|||||||||++|+++|+.|++. |++|+|||+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~---G~~V~liE~~~~ 80 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGA---GYKVAMFDIGEI 80 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT---TCEEEEECSSCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhC---CCcEEEEeccCC
Confidence 469999999999999999999999 999999999864
No 352
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.24 E-value=0.00028 Score=77.60 Aligned_cols=36 Identities=28% Similarity=0.307 Sum_probs=33.0
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCC-ceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDG-CRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g-~~v~vie~~~~ 137 (673)
+.+||+|||||++||++|++|++. | .+|+|+|++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~---g~~~v~v~E~~~~ 44 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL---GYKNWHLYECNDT 44 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT---TCCSEEEEESSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc---CCCCEEEEeCCCC
Confidence 458999999999999999999999 7 79999999864
No 353
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.24 E-value=0.00019 Score=81.24 Aligned_cols=35 Identities=20% Similarity=0.483 Sum_probs=32.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCC--ceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDG--CRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g--~~v~vie~~~~ 137 (673)
.+||||||||++|+++|+.|++. | .+|+|||+...
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~---G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQA---NPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH---CTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhc---CCCCcEEEEeCCCC
Confidence 58999999999999999999999 8 99999999753
No 354
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.22 E-value=0.00023 Score=73.55 Aligned_cols=38 Identities=26% Similarity=0.549 Sum_probs=33.0
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.++||+|||||++|+++|+.|++.. +|++|+|+|+...
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~-~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNR-PDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHC-TTSCEEEECSSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcC-CCCeEEEEecCcc
Confidence 3589999999999999999999862 4689999999763
No 355
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.22 E-value=0.00024 Score=77.92 Aligned_cols=31 Identities=29% Similarity=0.515 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCceEEEEecc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRD 135 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~ 135 (673)
||||||||++|+++|+.|++. |++|+||||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~---G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA---GKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT---TCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHC---CCCEEEEeCC
Confidence 899999999999999999999 9999999998
No 356
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.21 E-value=0.00022 Score=80.38 Aligned_cols=39 Identities=28% Similarity=0.444 Sum_probs=33.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhc---CCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKV---LDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~---~~g~~v~vie~~~~ 137 (673)
+.|||||||||++|+++|+.|++.. .+|++|+||||...
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~ 75 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 75 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCC
Confidence 4599999999999999999999871 23799999999753
No 357
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.20 E-value=0.00018 Score=80.17 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHHH------------hcCCCceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKE------------KVLDGCRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~------------~~~~g~~v~vie~~~ 136 (673)
.+||||||||++|+++|+.|++ . |++|+|||+..
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~---G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP---KLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC---SCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCC---CCeEEEEeCCC
Confidence 4799999999999999999999 6 99999999865
No 358
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.19 E-value=0.00032 Score=75.19 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=31.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCC--eEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGC--RVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~--~v~~ie~~~~ 281 (673)
++|+|||+|++|+++|..|+ +.|. +|+|+|+.+.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~---~~g~~~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLR---QAKYPGRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHH---HTTCCSCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHH---hhCcCCCEEEEeCCCC
Confidence 68999999999999999999 6777 8999999876
No 359
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.19 E-value=0.0002 Score=82.02 Aligned_cols=36 Identities=31% Similarity=0.532 Sum_probs=33.1
Q ss_pred ccccEEEECCChHHHHHHHHHHH-----hcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKE-----KVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~-----~~~~g~~v~vie~~~~ 137 (673)
..+||+|||||++||++|+.|++ . |++|+|||+...
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~---Gi~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKP---DLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHST---TCCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccC---CCCEEEEeCCCC
Confidence 35899999999999999999999 8 999999998753
No 360
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.19 E-value=0.00041 Score=75.57 Aligned_cols=36 Identities=8% Similarity=0.129 Sum_probs=31.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+||+|||+|.+|+.+|..|+++ ..|.+|+|+|+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~-~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIAD-HPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CcCCcEEEEECCCC
Confidence 4799999999999999999821 23899999999876
No 361
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.18 E-value=0.00059 Score=74.35 Aligned_cols=36 Identities=28% Similarity=0.447 Sum_probs=31.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
++|+|||+|++|+++|..|+++ ..+.+|+|+|+.+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~-~~g~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK-YPQAEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CSSSEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhh-CcCCcEEEEECCCC
Confidence 6899999999999999999821 23899999999886
No 362
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.17 E-value=0.00023 Score=79.49 Aligned_cols=35 Identities=34% Similarity=0.523 Sum_probs=31.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||||||||++|+++|+.|++ |.+|+||||...
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~----G~~V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD----QHQVIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT----TSCEEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhc----CCcEEEEECCCC
Confidence 46899999999999999999987 689999999864
No 363
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.16 E-value=0.00039 Score=76.41 Aligned_cols=37 Identities=27% Similarity=0.366 Sum_probs=31.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+||+|||+|.+|+.+|..|++ ...+.+|+|||+.+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~-~~~g~~V~lie~~~~ 72 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVR-NDENANVVTLEKGEI 72 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-HCTTCEEEEECSSSC
T ss_pred cceEEEECCCHHHHHHHHHHHh-hCcCCcEEEEECCCC
Confidence 3689999999999999999982 124899999999877
No 364
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.15 E-value=0.00028 Score=74.21 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
+||+|||||++|+.+|+.|++. |++|+|||++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~---G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL---GVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHC---CCcEEEEeccC
Confidence 6999999999999999999999 99999999876
No 365
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.15 E-value=0.0002 Score=79.63 Aligned_cols=37 Identities=32% Similarity=0.549 Sum_probs=32.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+||+||||+|++|+.+|.+|++.. +.+|+|||++..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~--~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDP--DSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTST--TSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCC--CCeEEEEcCCCC
Confidence 3699999999999999999999842 789999998753
No 366
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.13 E-value=0.0003 Score=80.15 Aligned_cols=39 Identities=23% Similarity=0.372 Sum_probs=33.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhc---CCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKV---LDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~---~~g~~v~vie~~~~ 137 (673)
..|||||||||+|||++|+.|++.. .+|++|+||||...
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 3599999999999999999999861 12789999999864
No 367
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.13 E-value=0.00031 Score=77.41 Aligned_cols=36 Identities=28% Similarity=0.503 Sum_probs=33.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||+|||||++||++|+.|++. |++|+|+|+...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~---g~~v~vlE~~~~ 67 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA---GHQVTVLEASER 67 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH---TCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC---CCeEEEEECCCC
Confidence 357999999999999999999999 999999998764
No 368
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.12 E-value=0.00045 Score=74.36 Aligned_cols=36 Identities=28% Similarity=0.527 Sum_probs=32.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCe--EEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCR--VAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~--v~~ie~~~~ 281 (673)
..++|+|||+|++|+++|..|+ +.|.+ |+++|+.+.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~---~~g~~~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALR---QNGFEGRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHH---HTTCCSCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHH---ccCcCCCEEEEecCCC
Confidence 4689999999999999999999 67766 999999877
No 369
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.10 E-value=0.00028 Score=78.86 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=32.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..||+||||+|++|+++|.+|++. |++|+|||++.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~---g~~VlvlE~g~ 40 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEA---GKKVLLLERGG 40 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSC
T ss_pred CceeEEEECcCHHHHHHHHHHHhC---CCeEEEEeCCC
Confidence 459999999999999999999998 99999999875
No 370
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.10 E-value=0.00032 Score=74.72 Aligned_cols=35 Identities=34% Similarity=0.534 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+||+|||||++|+++|+.|++. |++|+|+|++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~---g~~v~v~E~~~~ 37 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK---GHQVHIIDQRDH 37 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT---TCEEEEEESSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC---CCcEEEEEecCC
Confidence 37999999999999999999999 999999999764
No 371
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.06 E-value=0.00038 Score=73.91 Aligned_cols=34 Identities=26% Similarity=0.413 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
||+|||||++|+++|+.|++. .+|++|+|+|+..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~-~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA-RPLWAIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-CTTSEEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCCCCEEEEECCC
Confidence 899999999999999999986 2379999999975
No 372
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.02 E-value=0.00033 Score=78.57 Aligned_cols=37 Identities=30% Similarity=0.405 Sum_probs=33.0
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
...||+||||||.||+++|.+|++.. +.+|+|||+..
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~--~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENP--NISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTST--TCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCC--CCcEEEEecCC
Confidence 34699999999999999999999853 78999999976
No 373
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.02 E-value=0.0032 Score=70.92 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||||++|+++|..|++ ...+.+|+|+|+.+.
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~-~~~g~~V~vie~~~~ 72 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRR-LSEEDEIIMVERGEY 72 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-HCSSSEEEEECSSSC
T ss_pred cCCCEEEECCcHHHHHHHHHHHh-hCcCCCEEEEECCCC
Confidence 45789999999999999999982 133899999999887
No 374
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.02 E-value=0.00075 Score=74.53 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=32.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+.+|+|||+|.+|+.+|..|. +.+.+|+|||+.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~---~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHID---TKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSC---TTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhh---hCCCcEEEECCCCC
Confidence 4468999999999999999998 78899999999876
No 375
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.99 E-value=0.00034 Score=77.11 Aligned_cols=36 Identities=14% Similarity=0.226 Sum_probs=32.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCC---CeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDG---CRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g---~~v~~ie~~~~ 281 (673)
+.+||+|||+|.+|+.+|..|+ +.| .+|+|||+.+.
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~---~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTML---TNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH---HHHGGGSEEEEECSSSC
T ss_pred cCCcEEEECCCHHHHHHHHHHH---hcCCCCCeEEEEECCCC
Confidence 3589999999999999999999 555 99999999875
No 376
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.99 E-value=0.00037 Score=78.21 Aligned_cols=36 Identities=31% Similarity=0.601 Sum_probs=32.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCC-ceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDG-CRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g-~~v~vie~~~~ 137 (673)
..||+||||||.||+++|..|++. + .+|+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~---~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAEN---PNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTS---TTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhC---CCCcEEEEecCCC
Confidence 459999999999999999999998 6 79999998753
No 377
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.00059 Score=70.84 Aligned_cols=38 Identities=26% Similarity=0.521 Sum_probs=33.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|++|++ .+.|++|+|+|+.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~-~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAK-NRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHH-HCTTSCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHH-hCCCCeEEEEECCCC
Confidence 45899999999999999999972 256999999999876
No 378
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.92 E-value=0.00062 Score=76.51 Aligned_cols=36 Identities=25% Similarity=0.535 Sum_probs=33.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||+|||+|++|+++|+.|++. |.+|+|+|+...
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~---g~~v~~~e~~~~ 160 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA---GAKVILLEKEPI 160 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS---SCCEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC---CCcEEEEecCCC
Confidence 468999999999999999999999 999999999864
No 379
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.91 E-value=0.00059 Score=73.81 Aligned_cols=36 Identities=19% Similarity=0.455 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
+||||||||++|+++|+.|++. ..|.+|+|||++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~-~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL-MPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-CTTCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcC-CCCCeEEEECCCCC
Confidence 5999999999999999999993 12899999999763
No 380
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.83 E-value=0.00068 Score=78.65 Aligned_cols=35 Identities=26% Similarity=0.441 Sum_probs=32.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.+||+|||||++|+++|+.|++. |++|+|+|+...
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~---g~~v~v~E~~~~ 370 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNF---GIKVTVLEAKDR 370 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH---TCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC---CCcEEEEecccc
Confidence 58999999999999999999999 999999998754
No 381
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.80 E-value=0.00073 Score=73.96 Aligned_cols=36 Identities=19% Similarity=0.346 Sum_probs=31.9
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~~~ 137 (673)
..+||+|||||++|+++|+.|++. |. +|+|+|+...
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~---g~~~v~~~e~~~~ 39 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA---GITDLLILEATDH 39 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT---TCCCEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc---CCCceEEEeCCCC
Confidence 358999999999999999999999 98 8999999764
No 382
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.72 E-value=0.0012 Score=73.02 Aligned_cols=37 Identities=24% Similarity=0.294 Sum_probs=33.8
Q ss_pred CCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 97 FPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 97 ~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
...+||+||||+|++|+.+|+.|++. |.+|+|||+..
T Consensus 8 ~~~~~d~~iiG~G~~g~~~a~~l~~~---~~~v~~~e~~~ 44 (507)
T 1coy_A 8 DGDRVPALVIGSGYGGAVAALRLTQA---GIPTQIVEMGR 44 (507)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHHT---TCCEEEECSSC
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHHC---CCcEEEEECCC
Confidence 34579999999999999999999998 99999999875
No 383
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.71 E-value=0.00058 Score=76.42 Aligned_cols=36 Identities=22% Similarity=0.445 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.||+||||||.+|+.+|.+|++.. +.+|+|||+...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~--~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDP--DVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTST--TCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCc--CCcEEEEecCCc
Confidence 499999999999999999999832 899999998764
No 384
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.70 E-value=0.00073 Score=75.28 Aligned_cols=36 Identities=31% Similarity=0.509 Sum_probs=32.2
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
...||+||||||.+|+++|..|++ |.+|+|||+...
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse----g~~VlvLEaG~~ 59 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE----KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT----TSCEEEECSSBC
T ss_pred cCcccEEEECccHHHHHHHHHHhc----CCcEEEEecCCC
Confidence 356999999999999999999998 579999999753
No 385
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.69 E-value=0.002 Score=68.19 Aligned_cols=36 Identities=22% Similarity=0.389 Sum_probs=33.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecC-CC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRD-FT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~-~~ 281 (673)
..++|+|||+|++|+.+|+.|+ +.|++|+|+|+. ..
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~---~~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLT---RAGHDVTILEANANR 79 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHH---HTSCEEEEECSCSSC
T ss_pred CCceEEEECCCHHHHHHHHHHH---HCCCcEEEEeccccc
Confidence 5679999999999999999999 789999999998 55
No 386
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=96.67 E-value=0.0016 Score=71.83 Aligned_cols=36 Identities=28% Similarity=0.493 Sum_probs=33.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+.+|+.|+ +.|++|+|+|+...
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~---~~g~~v~v~E~~~~ 47 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLK---IHGLNVTVFEAEGK 47 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH---TTSCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHH---HCCCcEEEEEeCCC
Confidence 4579999999999999999999 88999999999877
No 387
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.64 E-value=0.0012 Score=72.93 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=32.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.+||++|||+|++|+++|+.|++. |++|+|||++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~---~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA---GVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT---TCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC---CCcEEEEeCCC
Confidence 359999999999999999999998 99999999875
No 388
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=96.58 E-value=0.0017 Score=69.21 Aligned_cols=36 Identities=39% Similarity=0.510 Sum_probs=33.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+.+|+.|+ +.|.+|+|+|+.+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~---~~g~~v~v~E~~~~ 63 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLA---SSGQRVLIVDRRPH 63 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHH---HTTCCEEEECSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHH---HCCCceEEEeccCC
Confidence 5689999999999999999999 78999999999876
No 389
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.54 E-value=0.0018 Score=74.13 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=33.6
Q ss_pred CccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 98 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 98 ~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
...+||+|||||++|+++|+.|++. |++|+|+|+...
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~---g~~v~~~e~~~~ 141 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF---GMDVTLLEARDR 141 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC---CCeEEEEecCCC
Confidence 3458999999999999999999999 999999998764
No 390
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.48 E-value=0.0019 Score=71.58 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=33.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCC-CeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDG-CRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g-~~v~~ie~~~~ 281 (673)
..+||+|||||++|+.+|+.|+ +.| .+|+|+|++..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~---~~G~~~V~VlEa~~r 43 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLH---QNGIQDCLVLEARDR 43 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHH---HTTCCSEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHH---hcCCCCEEEEeCCCC
Confidence 4579999999999999999999 889 99999999876
No 391
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.44 E-value=0.0018 Score=69.99 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=32.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+.++|+|||||++|+.+|+.|+ +.|.+|+|+|+.+.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La---~~G~~V~viE~~~~ 56 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLR---QHDVDVTVYTDRKP 56 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHH---HTTCEEEEEESCCG
T ss_pred CCCCEEEECCcHHHHHHHHHHH---HCCCeEEEEcCCCh
Confidence 4578999999999999999999 89999999999874
No 392
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.43 E-value=0.0023 Score=74.81 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=33.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..+||+|||||++||++|+.|++. |++|+|+|+...
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~---g~~v~v~E~~~~ 312 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSF---GMDVTLLEARDR 312 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC---CCcEEEEEecCc
Confidence 457999999999999999999999 999999998764
No 393
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.42 E-value=0.0019 Score=72.65 Aligned_cols=36 Identities=31% Similarity=0.541 Sum_probs=33.0
Q ss_pred ccccEEEECCChHHHHHHHHHHH-hcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKE-KVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~-~~~~g~~v~vie~~~~ 137 (673)
..||+||||+|++|+++|..|++ . |++|+|||++..
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~---~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENP---KIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTST---TCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCC---CCcEEEEecCCc
Confidence 46999999999999999999999 6 999999998754
No 394
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=96.42 E-value=0.0019 Score=69.01 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=32.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccC-CCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLD-GCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~-g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+.+|+.|+ +. |++|+|+|++..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~---~~~g~~v~v~E~~~~ 42 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVA---TQLDKRVLVLERRPH 42 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHH---HHSCCCEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHH---HhCCCCEEEEeCCCC
Confidence 3579999999999999999999 66 899999999876
No 395
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.41 E-value=0.0023 Score=68.31 Aligned_cols=35 Identities=26% Similarity=0.505 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.|||||||++|+++|.+|++.+ .+.+|+|||++..
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~-~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLAD-PSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC-TTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcC-cCCeEEEEeCCCC
Confidence 5999999999999999999872 2368999999875
No 396
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=96.32 E-value=0.0027 Score=67.07 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=31.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+||+|||+|++|+.+|+.|+ +.|.+|+|+|++..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~---~~g~~v~v~E~~~~ 35 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELK---KLNKKVLVIEKRNH 35 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHG---GGTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHH---hCCCcEEEEecCCC
Confidence 68999999999999999999 77999999999876
No 397
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.26 E-value=0.0023 Score=71.43 Aligned_cols=37 Identities=27% Similarity=0.516 Sum_probs=33.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 99 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 99 ~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..||+||||+|++|+++|++|++.. |.+|+|||++..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~--~~~v~~~e~g~~ 48 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDP--AVSVALVEAGPD 48 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTST--TSCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCC--CCCEEEEecCCc
Confidence 4699999999999999999999863 789999999754
No 398
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.24 E-value=0.0024 Score=72.80 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCC--------ceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDG--------CRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g--------~~v~vie~~~ 136 (673)
..+|+|||||++||++|+.|++. | .+|+|+|+..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~---g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL---AATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH---HTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHc---CcccccCCCceEEEEeccC
Confidence 47999999999999999999998 7 9999999875
No 399
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.16 E-value=0.0028 Score=67.14 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=31.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccC--CCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLD--GCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~--g~~v~~ie~~~~ 281 (673)
.||+|||||++|+.+|..|+ +. |.+|+|+||.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~---~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLK---QARPLWAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHH---HHCTTSEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHH---hcCCCCCEEEEECCCC
Confidence 37999999999999999999 66 999999999876
No 400
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.12 E-value=0.0047 Score=69.51 Aligned_cols=39 Identities=33% Similarity=0.408 Sum_probs=36.0
Q ss_pred CCCccccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 96 LFPTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 96 ~~~~~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
.++++|||+|||+|+.|...|..|++. |++|++||++..
T Consensus 4 ~~~~~~D~~i~GtGl~~~~~a~~~~~~---g~~vl~id~~~~ 42 (650)
T 1vg0_A 4 NLPSDFDVIVIGTGLPESIIAAACSRS---GQRVLHVDSRSY 42 (650)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred cCCCcCCEEEECCcHHHHHHHHHHHhC---CCEEEEEcCCCc
Confidence 356689999999999999999999999 999999999875
No 401
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.09 E-value=0.004 Score=67.18 Aligned_cols=61 Identities=8% Similarity=0.064 Sum_probs=45.3
Q ss_pred HHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcHHHHHHc
Q psy10285 410 LNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSGQVARML 488 (673)
Q Consensus 410 ~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~~l~~~~ 488 (673)
.+.+.+.++++||+++. +.|++++.+ ++.+.+.+|+..++.+|.||+|+|.....++...
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~~~-------------------~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~ 263 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIEPD-------------------KVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASA 263 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECSS-------------------EEEEECTTSCEEEEECSEEEEECEEECCHHHHTT
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEeCC-------------------ceEEEeeCCCceEeecceEEEeccCCCchHHHhc
Confidence 44566778889999995 489888532 4456666666678999999999997776766554
Q ss_pred C
Q psy10285 489 K 489 (673)
Q Consensus 489 g 489 (673)
+
T Consensus 264 ~ 264 (430)
T 3hyw_A 264 G 264 (430)
T ss_dssp C
T ss_pred c
Confidence 4
No 402
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.08 E-value=0.0056 Score=65.04 Aligned_cols=35 Identities=29% Similarity=0.448 Sum_probs=32.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++|+|||+|++|+.+|+.|+ +.|++|+|+|++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~---~~g~~v~v~E~~~~ 37 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLA---EKGHQVHIIDQRDH 37 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHH---TTTCEEEEEESSSS
T ss_pred cCCEEEECcCHHHHHHHHHHH---HCCCcEEEEEecCC
Confidence 368999999999999999999 78999999999876
No 403
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=95.96 E-value=0.0049 Score=64.79 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=32.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+||+|||+|.+|+++|+.|+ +.|.+|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la---~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLL---RLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHH---HTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHH---HCCCcEEEEeccCC
Confidence 58999999999999999999 89999999999874
No 404
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.93 E-value=0.0066 Score=67.31 Aligned_cols=37 Identities=35% Similarity=0.501 Sum_probs=33.9
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 242 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 242 ~~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
...+||+|||+|.+|+++|..|+ +.|.+|+|||+.+.
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~---~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLR---AMGGRQLIVDRWPF 77 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHH---HTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHH---HCCCCEEEEeCCCC
Confidence 35689999999999999999999 78999999999884
No 405
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=95.92 E-value=0.0058 Score=66.51 Aligned_cols=36 Identities=28% Similarity=0.347 Sum_probs=33.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|++|+++|+.|+ +.|++|+|+|+.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~---~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELR---AKGYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHH---HHTCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHH---HCCCeEEEEeccCC
Confidence 5689999999999999999999 77999999999876
No 406
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=95.63 E-value=0.0087 Score=68.73 Aligned_cols=37 Identities=19% Similarity=0.382 Sum_probs=33.8
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 242 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 242 ~~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
...++|+|||||++|+++|+.|+ +.|++|+|+|+...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La---~~G~~V~liE~~~~ 425 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALG---VRGYDVVLAEAGRD 425 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHH---HHTCEEEEECSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHH---HCCCeEEEEecCCC
Confidence 35689999999999999999999 77999999999876
No 407
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.13 E-value=0.019 Score=65.58 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=34.0
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 242 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 242 ~~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
...++|+|||+|++|+.+|+.|+ +.|++|+|+|+...
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~---~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQ---SFGMDVTLLEARDR 141 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHH---HTTCEEEEECSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHH---HCCCeEEEEecCCC
Confidence 35689999999999999999999 88999999999765
No 408
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.07 E-value=0.021 Score=66.01 Aligned_cols=36 Identities=28% Similarity=0.407 Sum_probs=33.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||||++|+++|..|+ +.|++|+|+|+.+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~---~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLM---ESGYTVHLTDTAEK 423 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHH---HTTCEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHH---HCCCeEEEEeCCCC
Confidence 5689999999999999999999 78999999999876
No 409
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=94.98 E-value=0.022 Score=66.63 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=34.0
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 242 PTHVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 242 ~~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
...++|+|||+|++|+.+|+.|+ +.|++|+|+|+...
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~---~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQ---SFGMDVTLLEARDR 312 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHH---HTTCEEEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHH---HCCCcEEEEEecCc
Confidence 35689999999999999999999 89999999999875
No 410
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.83 E-value=0.017 Score=62.59 Aligned_cols=37 Identities=32% Similarity=0.361 Sum_probs=31.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++|+|||+|++|+++|..|++ ...+.+|+|+|+.+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~-~~~~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKR-LKPEWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHH-hCcCCCEEEEECCCc
Confidence 4789999999999999999982 234899999999886
No 411
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.76 E-value=0.026 Score=64.60 Aligned_cols=36 Identities=19% Similarity=0.362 Sum_probs=33.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..++|+|||+|++|+++|..|+ +.|++|+|+|+.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~---~~g~~V~lie~~~~ 407 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAA---ARGHQVTLFDAHSE 407 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHH---TTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHH---hCCCeEEEEeCCCC
Confidence 4689999999999999999999 88999999999876
No 412
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.76 E-value=0.46 Score=52.04 Aligned_cols=39 Identities=18% Similarity=0.294 Sum_probs=29.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhc-----------cCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKV-----------LDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~-----------~~g~~v~~ie~~~~ 281 (673)
.-+||+|||+|++|+++|..|.++. ..+..+..+||.+.
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~ 87 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQ 87 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSS
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCC
Confidence 4589999999999999999997321 12346778888776
No 413
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.69 E-value=0.022 Score=59.91 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=31.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.+.||+|||+|.+|+++|..|+ +.| +|+|+|+.+.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~---~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLS---QTY-EVTVIDKEPV 41 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHT---TTS-EEEEECSSSS
T ss_pred CCCcEEEECCcHHHHHHHHHHh---hcC-CEEEEECCCC
Confidence 4578999999999999999998 788 9999999876
No 414
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.48 E-value=0.028 Score=60.09 Aligned_cols=65 Identities=20% Similarity=0.204 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcH-HH
Q psy10285 407 WLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSG-QV 484 (673)
Q Consensus 407 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~-~l 484 (673)
..+...+.+.+++.|++++. .+|+++..++ ++.+ |.+.+|+ ++.||.||+|+|.... .+
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---------------~~~~--v~~~dg~--~i~aD~Vv~a~G~~p~~~l 245 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG---------------QLEQ--VMASDGR--SFVADSALICVGAEPADQL 245 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS---------------SCCE--EEETTSC--EEECSEEEECSCEEECCHH
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC---------------cEEE--EEECCCC--EEEcCEEEEeeCCeecHHH
Confidence 45677888888999999995 5899997643 2333 7778884 8999999999997755 46
Q ss_pred HHHcCC
Q psy10285 485 ARMLKI 490 (673)
Q Consensus 485 ~~~~g~ 490 (673)
++.+|+
T Consensus 246 ~~~~gl 251 (410)
T 3ef6_A 246 ARQAGL 251 (410)
T ss_dssp HHHTTC
T ss_pred HHhCCC
Confidence 666654
No 415
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=94.31 E-value=0.023 Score=64.82 Aligned_cols=36 Identities=28% Similarity=0.357 Sum_probs=32.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCC--------CeEEEEecCC-C
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDG--------CRVAVVDRDF-T 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g--------~~v~~ie~~~-~ 281 (673)
..++|+|||+|++|+.+|+.|+ +.| .+|+|+|++. .
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~---~~g~~~~~~~~~~V~v~E~~~~r 99 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELG---RLAATLPAGSGIDVQIYEADPDS 99 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHH---HHHTTSCTTCEEEEEEECCCTTB
T ss_pred CCCeEEEECCCHHHHHHHHHHH---HcCcccccCCCceEEEEeccCcc
Confidence 4578999999999999999998 666 8999999987 5
No 416
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=94.30 E-value=0.026 Score=61.27 Aligned_cols=35 Identities=20% Similarity=0.075 Sum_probs=31.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhhcc-C------CCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVL-D------GCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~-~------g~~v~~ie~~~~ 281 (673)
.++|+|||+|++|+.+|..|+ + . +.+|+|+|+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~---~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLL---KAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHH---HHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHH---hhCccccCCCCeEEEEecCCC
Confidence 478999999999999999998 5 4 899999999865
No 417
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.23 E-value=0.037 Score=58.49 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=30.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCC--CeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDG--CRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g--~~v~~ie~~~~ 281 (673)
.+||+|||+|++|+++|..|+ +.| .+|+++|+...
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~---~~g~~~~V~lie~~~g 40 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWR---KLDGETPLLMITADDG 40 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHH---TTCSSSCEEEECSSCC
T ss_pred CCcEEEECChHHHHHHHHHHH---hhCCCCCEEEEECCCC
Confidence 478999999999999999999 667 56999998654
No 418
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.17 E-value=0.021 Score=62.64 Aligned_cols=35 Identities=31% Similarity=0.394 Sum_probs=32.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|..|+ +. .+|+|+|+.+.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~---~~-~~V~vie~~~~ 141 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQ---QY-LTVALIEERGW 141 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHT---TT-CCEEEECTTSS
T ss_pred ccCCEEEECccHHHHHHHHHHH---hc-CCEEEEeCCCC
Confidence 4579999999999999999999 67 99999999886
No 419
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.10 E-value=0.029 Score=62.59 Aligned_cols=83 Identities=14% Similarity=0.147 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHcCCeEEE-eceeEEEecCCccc--cccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcH-
Q psy10285 407 WLYLNAVKKKAISLGAEYVR-GEVVDFLRRRNNQV--HYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSG- 482 (673)
Q Consensus 407 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~~~~--~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~- 482 (673)
..+...+.+.+++.|++++. +.|+++..+.++.+ +..|........-.++.+.+.+|+ ++.||.||+|+|....
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~--~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGE--LLETDLLIMAIGVRPET 269 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSC--EEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCC--EEEcCEEEECcCCccch
Confidence 46677788889999999996 48999986310000 000000000000013456667774 8999999999997654
Q ss_pred HHHHHcCCC
Q psy10285 483 QVARMLKIG 491 (673)
Q Consensus 483 ~l~~~~g~~ 491 (673)
.++..+|+.
T Consensus 270 ~l~~~~g~~ 278 (565)
T 3ntd_A 270 QLARDAGLA 278 (565)
T ss_dssp HHHHHHTCC
T ss_pred HHHHhCCcc
Confidence 466666643
No 420
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.09 E-value=0.031 Score=60.73 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=31.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCC--CeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDG--CRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g--~~v~~ie~~~~ 281 (673)
..++|+|||+|++|+.+|..|+ +.+ .+|+|+|+.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~---~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLL---KHHSRAHVDIYEKQLV 42 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH---HHCSSCEEEEECSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHH---hcCCCCCEEEEeCCCc
Confidence 4578999999999999999998 556 99999999876
No 421
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.07 E-value=0.032 Score=59.56 Aligned_cols=61 Identities=16% Similarity=0.177 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEe-ceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcH-HH
Q psy10285 407 WLYLNAVKKKAISLGAEYVRG-EVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSG-QV 484 (673)
Q Consensus 407 ~~~~~~l~~~~~~~Gv~i~~~-~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~-~l 484 (673)
..+...+.+.+++.|++++.+ +|+++. + + . |.+.+| .++.+|.||+|+|.... .+
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~--------------~---~--v~~~~g--~~i~~D~vi~a~G~~p~~~l 243 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV--D--------------G---V--VLLDDG--TRIAADMVVVGIGVLANDAL 243 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE--T--------------T---E--EEETTS--CEEECSEEEECSCEEECCHH
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE--C--------------C---E--EEECCC--CEEEcCEEEECcCCCccHHH
Confidence 467778888899999999965 899998 3 1 3 666777 48999999999997654 46
Q ss_pred HHHcCC
Q psy10285 485 ARMLKI 490 (673)
Q Consensus 485 ~~~~g~ 490 (673)
++.+|+
T Consensus 244 ~~~~gl 249 (408)
T 2gqw_A 244 ARAAGL 249 (408)
T ss_dssp HHHHTC
T ss_pred HHhCCC
Confidence 666654
No 422
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.01 E-value=0.034 Score=61.07 Aligned_cols=66 Identities=15% Similarity=0.121 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHcCCeEEEe-ceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcH-H
Q psy10285 406 PWLYLNAVKKKAISLGAEYVRG-EVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSG-Q 483 (673)
Q Consensus 406 ~~~~~~~l~~~~~~~Gv~i~~~-~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~-~ 483 (673)
+..+...+.+.+++.||+++.+ +|+++..+++ .+.|++.+|+ ++.||.||+|+|.... .
T Consensus 225 ~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~-----------------~~~v~l~dG~--~i~aD~Vv~a~G~~pn~~ 285 (493)
T 1m6i_A 225 PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSG-----------------KLLIKLKDGR--KVETDHIVAAVGLEPNVE 285 (493)
T ss_dssp CHHHHHHHHHHHHTTTCEEECSCCEEEEEEETT-----------------EEEEEETTSC--EEEESEEEECCCEEECCT
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCC-----------------eEEEEECCCC--EEECCEEEECCCCCccHH
Confidence 3567778888899999999964 8999986542 3457778884 8999999999997654 3
Q ss_pred HHHHcCC
Q psy10285 484 VARMLKI 490 (673)
Q Consensus 484 l~~~~g~ 490 (673)
+++.+|+
T Consensus 286 l~~~~gl 292 (493)
T 1m6i_A 286 LAKTGGL 292 (493)
T ss_dssp THHHHTC
T ss_pred HHHHcCC
Confidence 6665554
No 423
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=93.81 E-value=0.039 Score=66.17 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=33.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCC-eEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~-~v~~ie~~~~ 281 (673)
.+++|+|||+|++|+++|..|+ +.|+ +|+|+|+.+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~---~~G~~~Vtv~E~~~~ 222 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLA---RLGYSDITIFEKQEY 222 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHH---HTTCCCEEEEESSSS
T ss_pred CCCEEEEECccHHHHHHHHHHH---hcCCCcEEEEeCCCC
Confidence 4689999999999999999999 7898 7999999865
No 424
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=93.39 E-value=0.049 Score=64.89 Aligned_cols=36 Identities=31% Similarity=0.527 Sum_probs=33.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|++|+++|..|+ +.|.+|+|||+.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la---~~G~~V~lie~~~~ 162 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREAS---RSGARVMLLDERAE 162 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH---HTTCCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHH---hCCCcEEEEeCCCC
Confidence 3589999999999999999999 78999999999876
No 425
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.03 E-value=0.094 Score=47.54 Aligned_cols=33 Identities=39% Similarity=0.547 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|+|||+|..|..+|..|++. |.+|+++|++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~---g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS---GHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhC---CCeEEEEECCH
Confidence 4699999999999999999999 99999999875
No 426
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.95 E-value=0.12 Score=46.00 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
-.++|||.|..|..+|..|.+. |.+|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~---g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS---DIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHC---CCCEEEEECCH
Confidence 3699999999999999999999 99999999875
No 427
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=92.81 E-value=0.091 Score=59.09 Aligned_cols=36 Identities=33% Similarity=0.361 Sum_probs=34.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+||+|||+|..|+..|..|+ +.|++|.+|||+..
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~---~~g~~vl~id~~~~ 42 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACS---RSGQRVLHVDSRSY 42 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHH---HTTCCEEEECSSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHH---hCCCEEEEEcCCCc
Confidence 5799999999999999999999 89999999999988
No 428
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.60 E-value=0.1 Score=46.28 Aligned_cols=32 Identities=25% Similarity=0.441 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.++|+|+|..|..+|..|++. |.+|+++|++.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~---g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA---GKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT---TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC---CCeEEEEECCH
Confidence 699999999999999999999 99999999875
No 429
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.41 E-value=0.13 Score=45.22 Aligned_cols=33 Identities=33% Similarity=0.536 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|+|||+|..|...|..|++. |.+|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~---g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK---GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCeEEEEECCH
Confidence 3699999999999999999999 99999999864
No 430
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.26 E-value=0.15 Score=45.33 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=32.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
...+|+|+|.|..|...|..|. ..|.+|+++|+.+.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~---~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLL---ASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHH---HTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHH---HCCCCEEEEECCHH
Confidence 4568999999999999999999 88999999999875
No 431
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=92.02 E-value=0.073 Score=57.35 Aligned_cols=59 Identities=10% Similarity=0.084 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHcCCeEEEe-ceeEEEecCCccccccCCCCCCccceeeEEEEcCCCCeeEEecCEEEEcCCCCcH-HHH
Q psy10285 408 LYLNAVKKKAISLGAEYVRG-EVVDFLRRRNNQVHYEGYDDGEYHSVNECVVRDEKGELKTITFAICVIAAGAYSG-QVA 485 (673)
Q Consensus 408 ~~~~~l~~~~~~~Gv~i~~~-~V~~i~~~~~~~~~~~~~~~~~~~~v~gv~V~t~~G~~~~i~ad~VVlAtG~~s~-~l~ 485 (673)
.+...+.+.+++.|++++.+ +|++++.. . +.+.+| .++.+|.||+|+|.... .++
T Consensus 189 ~~~~~~~~~l~~~gV~i~~~~~v~~~~~~-------------------~--v~~~~g--~~~~~D~vl~a~G~~Pn~~~~ 245 (437)
T 4eqs_A 189 DMNQPILDELDKREIPYRLNEEINAINGN-------------------E--ITFKSG--KVEHYDMIIEGVGTHPNSKFI 245 (437)
T ss_dssp GGGHHHHHHHHHTTCCEEESCCEEEEETT-------------------E--EEETTS--CEEECSEEEECCCEEESCGGG
T ss_pred hhHHHHHHHhhccceEEEeccEEEEecCC-------------------e--eeecCC--eEEeeeeEEEEeceecCcHHH
Confidence 45667888889999999964 88877532 2 667788 48999999999995432 344
Q ss_pred HHcC
Q psy10285 486 RMLK 489 (673)
Q Consensus 486 ~~~g 489 (673)
+..|
T Consensus 246 ~~~g 249 (437)
T 4eqs_A 246 ESSN 249 (437)
T ss_dssp TTSS
T ss_pred Hhhh
Confidence 4444
No 432
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=91.85 E-value=0.16 Score=43.13 Aligned_cols=33 Identities=36% Similarity=0.631 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCC-ceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDG-CRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g-~~v~vie~~~ 136 (673)
..|+|+|+|.+|..+|..|.+. | .+|++++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~---g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS---SNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC---SSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC---CCceEEEEeCCH
Confidence 4699999999999999999999 8 8999999865
No 433
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.72 E-value=0.18 Score=45.67 Aligned_cols=36 Identities=36% Similarity=0.466 Sum_probs=32.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
...+|+|+|+|..|..+|..|. ..|.+|+++++.+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~---~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLAS---SSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH---HTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHH---hCCCeEEEEECCHH
Confidence 4568999999999999999998 78999999998765
No 434
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.51 E-value=0.15 Score=44.70 Aligned_cols=35 Identities=26% Similarity=0.406 Sum_probs=30.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+.+|+|+|+|..|...|..|. +.|.+|+++++.+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~---~~g~~v~~~d~~~~ 38 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLS---EKGHDIVLIDIDKD 38 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHH---HTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHH---hCCCeEEEEECCHH
Confidence 357999999999999999999 78999999998654
No 435
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.07 E-value=0.18 Score=44.69 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=31.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
..+|+|+|+|..|..+|..|. ..|.+|+++|+.+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~---~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELT---AAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHH---HTTCCEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHH---HCCCeEEEEECCHH
Confidence 357999999999999999999 88999999998765
No 436
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.75 E-value=0.2 Score=42.42 Aligned_cols=35 Identities=34% Similarity=0.599 Sum_probs=31.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCC-CeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDG-CRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g-~~v~~ie~~~~ 281 (673)
.++|+|+|+|.+|..++..|. ..| .+|+++++.+.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~---~~g~~~v~~~~r~~~ 40 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLK---TSSNYSVTVADHDLA 40 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHH---HCSSEEEEEEESCHH
T ss_pred cCeEEEECCCHHHHHHHHHHH---hCCCceEEEEeCCHH
Confidence 467999999999999999999 778 89999998764
No 437
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.55 E-value=0.27 Score=44.25 Aligned_cols=32 Identities=13% Similarity=0.276 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEecc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRD 135 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~ 135 (673)
-.++|+|+|..|...|..|.+. |.+|+++|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~---g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR---GQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHC---CCCEEEEECC
Confidence 3699999999999999999999 9999999986
No 438
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.41 E-value=0.2 Score=51.39 Aligned_cols=33 Identities=36% Similarity=0.578 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
-.|.|||+|..|...|..++.. |++|+|+|.+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~---G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG---GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhC---CCeEEEEECCH
Confidence 4799999999999999999999 99999999765
No 439
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.20 E-value=0.23 Score=43.71 Aligned_cols=32 Identities=31% Similarity=0.404 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.++|+|+|..|..+|..|.+. |.+|+++|++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~---g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM---GHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT---TCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 599999999999999999999 89999999864
No 440
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.15 E-value=0.31 Score=43.83 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=30.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 280 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~ 280 (673)
..+|+|+|+|..|...|..|. ..|.+|+++++.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~---~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLN---QRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHH---HTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHH---HCCCCEEEEECCC
Confidence 457999999999999999999 7899999999974
No 441
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.29 E-value=0.41 Score=44.46 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
-.|+|||+|..|..+|..|.+.. |.+|+++|++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~--g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARY--GKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHH--CSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhcc--CCeEEEEECCH
Confidence 36999999999999999998752 57999999875
No 442
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.91 E-value=0.31 Score=45.26 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=32.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccC-CCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLD-GCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~-g~~v~~ie~~~~ 281 (673)
.+.+|+|+|.|..|...|..|. .. |.+|+++++.+.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~---~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELR---ARYGKISLGIEIREE 74 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHH---HHHCSCEEEEESCHH
T ss_pred CCCcEEEECCCHHHHHHHHHHH---hccCCeEEEEECCHH
Confidence 3567999999999999999998 77 999999998765
No 443
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.24 E-value=0.38 Score=42.20 Aligned_cols=35 Identities=29% Similarity=0.324 Sum_probs=31.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++|+|+|+|..|..+|..|. ..|.+|+++++.+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~---~~g~~v~~~d~~~~ 40 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELH---RMGHEVLAVDINEE 40 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHH---HTTCCCEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHH---HCCCEEEEEeCCHH
Confidence 357999999999999999999 78899999998654
No 444
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.09 E-value=0.33 Score=46.56 Aligned_cols=32 Identities=22% Similarity=0.427 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.|+|||+|..|...|..|.+. |.+|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~---g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR---KYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT---TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC---CCeEEEEECCH
Confidence 589999999999999999999 99999999875
No 445
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=88.07 E-value=0.54 Score=48.50 Aligned_cols=33 Identities=24% Similarity=0.424 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~~ 136 (673)
..|+|||+|..|.++|..|++. |+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~---g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR---ELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCCeEEEEECCh
Confidence 5799999999999999999999 87 899999875
No 446
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.00 E-value=0.42 Score=48.51 Aligned_cols=32 Identities=34% Similarity=0.608 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.|.|||+|..|.+.|..|++. |.+|+++|++.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~---G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT---GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC---CCeEEEEECCH
Confidence 599999999999999999999 99999999864
No 447
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=87.99 E-value=0.47 Score=47.66 Aligned_cols=32 Identities=28% Similarity=0.511 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.|.|||+|..|.+.|..|++. |.+|+++|++.
T Consensus 6 kV~VIGaG~mG~~iA~~la~~---G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFH---GFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT---TCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC---CCeEEEEeCCH
Confidence 699999999999999999999 99999999875
No 448
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.46 E-value=0.37 Score=49.29 Aligned_cols=36 Identities=33% Similarity=0.517 Sum_probs=31.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
...+|+|||+|..|...|..++ ..|++|+++|..+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a---~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFA---SGGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHH---HTTCCEEEECSCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHH---hCCCeEEEEECCHH
Confidence 3467999999999999999999 89999999998765
No 449
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=87.42 E-value=0.54 Score=48.12 Aligned_cols=33 Identities=33% Similarity=0.553 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~~ 136 (673)
..|.|||+|..|.+.|..|++. |+ +|+++|++.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~---g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD---NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCceEEEEeCCc
Confidence 4699999999999999999999 87 999999864
No 450
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.19 E-value=0.51 Score=48.31 Aligned_cols=33 Identities=42% Similarity=0.632 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|.|||+|..|.+.|..|++. |.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~---g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT---GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT---TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCeEEEEeCCh
Confidence 3699999999999999999999 99999999863
No 451
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=87.03 E-value=0.52 Score=45.55 Aligned_cols=33 Identities=24% Similarity=0.458 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
-.|+|||||-+|...|..|.+. |.+|+||+++.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~---GA~VtVvap~~ 64 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQE---GAAITVVAPTV 64 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGG---CCCEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEECCCC
Confidence 4799999999999999999999 99999999763
No 452
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=86.89 E-value=0.39 Score=47.97 Aligned_cols=33 Identities=36% Similarity=0.791 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|+|||||-+|+..|..|.+. |.+|+||+++.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~---Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPT---GCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGG---TCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhC---CCEEEEEcCCC
Confidence 4699999999999999999999 99999999764
No 453
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=86.60 E-value=0.56 Score=49.47 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l---Ga~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL---GAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHC---CCEEEEEcCCH
Confidence 5799999999999999999999 99999999875
No 454
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.59 E-value=0.5 Score=48.46 Aligned_cols=33 Identities=36% Similarity=0.578 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|.|||+|..|.+.|..|++. |++|+++|++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~---G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG---GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 3699999999999999999999 99999999875
No 455
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=86.57 E-value=0.59 Score=45.18 Aligned_cols=36 Identities=22% Similarity=0.405 Sum_probs=32.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++.|+|||+|.+|...|..|. ..|.+|+|+.+...
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll---~~GA~VtVvap~~~ 65 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFL---QEGAAITVVAPTVS 65 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHG---GGCCCEEEECSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHH---HCCCEEEEECCCCC
Confidence 5688999999999999999999 88999999987543
No 456
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=86.32 E-value=0.6 Score=48.83 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l---Ga~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL---GAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH---TCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 5799999999999999999999 99999999875
No 457
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.28 E-value=0.52 Score=48.06 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|.|||+|..|.+.|..|++. |.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~---g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS---GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT---SCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCeEEEEEcCc
Confidence 4699999999999999999999 99999999863
No 458
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.24 E-value=0.63 Score=45.84 Aligned_cols=33 Identities=24% Similarity=0.562 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~~ 136 (673)
..|+|||+|-.|..+|..|++. |. +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~---Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA---GVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc---CCCeEEEEcCCC
Confidence 5799999999999999999999 86 899999886
No 459
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=86.06 E-value=0.47 Score=47.39 Aligned_cols=36 Identities=33% Similarity=0.709 Sum_probs=32.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++.|+|||+|.+|...|..|. ..|.+|+|++....
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll---~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLM---PTGCKLTLVSPDLH 47 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHG---GGTCEEEEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHH---hCCCEEEEEcCCCC
Confidence 5688999999999999999999 89999999997543
No 460
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=85.70 E-value=0.65 Score=47.36 Aligned_cols=33 Identities=27% Similarity=0.582 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCc--eEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGC--RVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~--~v~vie~~~ 136 (673)
..|+|||+|.+|...|+.|++. |. +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~---g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR---GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCCCEEEEEeCCh
Confidence 4699999999999999999998 88 999999864
No 461
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=85.29 E-value=0.71 Score=46.90 Aligned_cols=32 Identities=31% Similarity=0.609 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCc--eEEEEeccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGC--RVAVVDRDF 136 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~--~v~vie~~~ 136 (673)
.|+|||+|.+|.+.|+.|+.. |+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~---g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR---GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT---TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC---CCCCEEEEEeCCH
Confidence 489999999999999999998 87 999999864
No 462
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.22 E-value=0.79 Score=47.03 Aligned_cols=33 Identities=30% Similarity=0.481 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~~ 136 (673)
..|.|||+|.+|..+|+.|+.. |+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~---g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK---NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCCeEEEEeCCH
Confidence 4699999999999999999999 77 899999764
No 463
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=85.05 E-value=0.77 Score=47.22 Aligned_cols=33 Identities=39% Similarity=0.479 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~~ 136 (673)
..|.|||||..|.++|+.|++. |+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~---g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK---DLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCCeEEEEECCH
Confidence 4799999999999999999999 87 899999865
No 464
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.00 E-value=0.59 Score=44.78 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=30.6
Q ss_pred cEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 246 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 246 ~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+|+|+|+|..|...|..|. ..|++|+++++.+.
T Consensus 2 ~iiIiG~G~~G~~la~~L~---~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSML---SRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHH---HTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHH---hCCCeEEEEECCHH
Confidence 5999999999999999999 78999999998765
No 465
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.86 E-value=0.85 Score=43.48 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|.|||+|..|.+.|..|++. |.+|.+++++.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~---g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA---GHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEcCCH
Confidence 4699999999999999999999 99999999864
No 466
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=84.84 E-value=0.73 Score=49.58 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|.|||+|..|.+.|..|++. |.+|+++|++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a---G~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA---GIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCeEEEEECcH
Confidence 3699999999999999999999 99999999875
No 467
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=84.83 E-value=0.8 Score=45.73 Aligned_cols=32 Identities=25% Similarity=0.238 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.|.|||+|..|.+.|..|++. |.+|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ---GHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT---TCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhC---CCCEEEEEcCc
Confidence 489999999999999999999 99999999875
No 468
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=84.75 E-value=0.71 Score=46.62 Aligned_cols=33 Identities=30% Similarity=0.509 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
+..|.|||+|..|.+.|..|+ . |++|+++|+..
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a---G~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S---KHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T---TSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c---CCEEEEEECCH
Confidence 467999999999999999999 8 99999999875
No 469
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=84.74 E-value=0.73 Score=50.08 Aligned_cols=35 Identities=26% Similarity=0.454 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
...|.|||+|..|+..|..|++. |.+|+++|++..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~---G~~V~~~d~~~~ 42 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI---GHDVFCLDVDQA 42 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCHH
T ss_pred CceEEEECcCHHHHHHHHHHHhC---CCEEEEEECCHH
Confidence 36899999999999999999999 999999998653
No 470
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=84.69 E-value=0.83 Score=47.78 Aligned_cols=34 Identities=38% Similarity=0.543 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEeccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDF 136 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~~ 136 (673)
...|||+|||.+|..+|..|... |. +|.++|++-
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~---Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAA---GATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH---TCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHc---CCCeEEEEECCC
Confidence 35899999999999999999999 87 999999873
No 471
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=84.53 E-value=0.67 Score=46.76 Aligned_cols=33 Identities=30% Similarity=0.574 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|.|||+|..|.+.|..|++. |.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~---g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS---LPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH---CTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHC---CCeEEEEEecc
Confidence 3699999999999999999999 89999999874
No 472
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=84.46 E-value=0.69 Score=46.42 Aligned_cols=34 Identities=26% Similarity=0.537 Sum_probs=31.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
++|.|||+|..|...|..|+ ..|++|+++++.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la---~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTA---FHGFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHH---HTTCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHH---hCCCeEEEEeCCHH
Confidence 57999999999999999999 88999999998765
No 473
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=84.28 E-value=0.45 Score=42.30 Aligned_cols=33 Identities=30% Similarity=0.543 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..++|||+|.+|...|..|++. |.+|+++++..
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~---g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP---QYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT---TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCEEEEEcCCH
Confidence 4799999999999999999987 88899999864
No 474
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=84.03 E-value=0.86 Score=46.59 Aligned_cols=33 Identities=42% Similarity=0.597 Sum_probs=30.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 280 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~ 280 (673)
.+|+|||+|..|...|..|+ +.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~---~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLA---KTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHH---HTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHH---hCCCeEEEEeCCh
Confidence 57999999999999999999 7899999999865
No 475
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=83.65 E-value=0.9 Score=48.12 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~---Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL---GAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEcCCH
Confidence 4699999999999999999999 99999999864
No 476
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=83.54 E-value=0.91 Score=46.95 Aligned_cols=33 Identities=27% Similarity=0.318 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|.|||+|..|...|..|++. |.+|++++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~---g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK---GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC---CCEEEEEeCCH
Confidence 4799999999999999999998 99999999864
No 477
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.52 E-value=0.96 Score=47.16 Aligned_cols=33 Identities=27% Similarity=0.561 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
-.|+|+|+|.+|.++|..|+.. |.+|+++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~---Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL---GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCEEEEEeCCH
Confidence 4799999999999999999999 89999999864
No 478
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=83.47 E-value=0.94 Score=45.76 Aligned_cols=32 Identities=31% Similarity=0.548 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.|.|||+|..|.+.|..|++. |.+|++++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG---GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC---CCcEEEEECCH
Confidence 699999999999999999999 99999999864
No 479
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=83.37 E-value=0.85 Score=49.35 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|.|||+|..|...|..|++. |++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~---G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV---GISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCeEEEEECCH
Confidence 3699999999999999999999 99999999865
No 480
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=83.33 E-value=0.92 Score=46.68 Aligned_cols=32 Identities=28% Similarity=0.482 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEecc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRD 135 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~ 135 (673)
..|.|||+|..|.+.|..|++. |.+|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~---g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA---GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT---TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEEEEECh
Confidence 3699999999999999999999 9999999985
No 481
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=83.27 E-value=0.93 Score=45.84 Aligned_cols=34 Identities=32% Similarity=0.543 Sum_probs=31.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
++|.|||+|..|...|..|+ ..|++|+++++.+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la---~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAA---ATGHTVVLVDQTED 49 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHH---HTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHH---hCCCeEEEEECCHH
Confidence 57999999999999999999 78999999998765
No 482
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=83.14 E-value=1.1 Score=46.83 Aligned_cols=33 Identities=36% Similarity=0.602 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEecc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRD 135 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~ 135 (673)
...|||+|||.+|..+|..|... |. +|.|+|+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~---G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDL---GVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH---TCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhC---CCCeEEEEECC
Confidence 36899999999999999999999 87 89999987
No 483
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=83.08 E-value=1.1 Score=46.22 Aligned_cols=37 Identities=24% Similarity=0.405 Sum_probs=31.7
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhhccCCC-eEEEEecCCC
Q psy10285 242 PTHVDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRDFT 281 (673)
Q Consensus 242 ~~~~~v~iiG~G~~g~~~A~~l~~~~~~g~-~v~~ie~~~~ 281 (673)
.+..+|+|||+|..|..+|..|+ ..|+ +|+++++.+.
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la---~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCA---LRELADVVLYDVVKG 44 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHH---HHTCCEEEEECSSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHH---hCCCCeEEEEECChh
Confidence 34568999999999999999999 6776 8999998764
No 484
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=82.94 E-value=1.1 Score=42.68 Aligned_cols=35 Identities=23% Similarity=0.383 Sum_probs=30.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCC
Q psy10285 243 THVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 280 (673)
Q Consensus 243 ~~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~ 280 (673)
...+|.|||+|..|...|..|+ +.|.+|+++++.+
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~---~~g~~V~~~~~~~ 52 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFE---IAGHEVTYYGSKD 52 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHH---HTTCEEEEECTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHH---HCCCEEEEEcCCH
Confidence 4567999999999999999999 7899999998764
No 485
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=82.78 E-value=0.95 Score=48.75 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|.|||.|.+|+++|..|+++ |.+|++.|+..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~---G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL---GAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT---TCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC---CCEEEEEeCCc
Confidence 4699999999999999999999 99999999853
No 486
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=82.69 E-value=0.71 Score=40.96 Aligned_cols=35 Identities=29% Similarity=0.524 Sum_probs=30.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 244 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 244 ~~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
+++|+|||+|.+|...|..|. ..|.+|+++++.+.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~---~~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFS---YPQYKVTVAGRNID 55 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCC---TTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHH---hCCCEEEEEcCCHH
Confidence 468999999999999999998 78888999998754
No 487
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.65 E-value=0.65 Score=50.20 Aligned_cols=34 Identities=26% Similarity=0.561 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..|+|+|+|-.|...|..|.+. |+.|+|||++..
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~---~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE---NNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST---TEEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCCEEEEECCHH
Confidence 3699999999999999999998 999999998764
No 488
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=82.54 E-value=0.86 Score=46.66 Aligned_cols=34 Identities=35% Similarity=0.549 Sum_probs=31.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
++|.|||+|..|...|..|+ ..|++|+++++.+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la---~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFA---SGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH---HTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHH---HCCCEEEEEeCCHH
Confidence 57999999999999999999 88999999998765
No 489
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.53 E-value=1.2 Score=42.98 Aligned_cols=36 Identities=17% Similarity=0.307 Sum_probs=31.9
Q ss_pred CcccEEEECC-cHHHHHHHHHHHhhccCCCeEEEEecCCC
Q psy10285 243 THVDILIIGG-GAIGSSIAYFIKEKVLDGCRVAVVDRDFT 281 (673)
Q Consensus 243 ~~~~v~iiG~-G~~g~~~A~~l~~~~~~g~~v~~ie~~~~ 281 (673)
.++.|+|.|+ |.+|..+|..|+ +.|.+|+++.|.+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~---~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELK---NKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH---HTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHH---hCCCeEEEEECChH
Confidence 5678999997 999999999999 78999999998765
No 490
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=82.49 E-value=1.1 Score=47.20 Aligned_cols=33 Identities=24% Similarity=0.280 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~---Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRL---GAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 4799999999999999999999 99999999864
No 491
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=82.48 E-value=1.1 Score=45.76 Aligned_cols=32 Identities=28% Similarity=0.530 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCc-eEEEEecc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGC-RVAVVDRD 135 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~-~v~vie~~ 135 (673)
-.|.|||+|..|.++|+.|++. |+ +|+++|.+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~---g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK---ELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCCeEEEEecc
Confidence 4699999999999999999999 88 99999987
No 492
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=82.43 E-value=1.1 Score=48.18 Aligned_cols=35 Identities=31% Similarity=0.450 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 100 HVDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 100 ~~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
...+.|||.|..|+.+|..|++. |++|+++|++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~---G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF---GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 36899999999999999999999 999999998764
No 493
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=82.40 E-value=1.1 Score=44.50 Aligned_cols=33 Identities=24% Similarity=0.529 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..++|+|+|-+|.++|..|++. |.+|+|++|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~---G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL---DCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHc---CCEEEEEECCH
Confidence 3699999999999999999999 89999999864
No 494
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=82.35 E-value=1.1 Score=48.39 Aligned_cols=34 Identities=32% Similarity=0.475 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEecccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDFT 137 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~~ 137 (673)
..|.|||.|..|+..|..|++. |.+|+++|++..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~---G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL---GANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhc---CCEEEEEECCHH
Confidence 3699999999999999999999 999999998753
No 495
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=82.19 E-value=1.1 Score=45.48 Aligned_cols=34 Identities=26% Similarity=0.428 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
.|+|||+|.+|.+.|..|++.+ .+.+|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~-~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQ-LARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCC-CCCEEEEEeCCh
Confidence 4899999999999999999851 168999999874
No 496
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=82.04 E-value=1.2 Score=46.61 Aligned_cols=33 Identities=27% Similarity=0.632 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
-.|+|+|+|.+|..+|..|+.. |.+|+++|++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~---Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM---GAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCEEEEEECCH
Confidence 4699999999999999999999 99999999864
No 497
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=81.99 E-value=1.1 Score=45.43 Aligned_cols=32 Identities=41% Similarity=0.608 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCceEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~~v~vie~~~ 136 (673)
..|.|||+|..|.+.|..|+ . |.+|++++|+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~---g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L---YHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T---TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-c---CCceEEEECCH
Confidence 36999999999999999999 8 99999999864
No 498
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=81.89 E-value=0.86 Score=46.41 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhhccCCCeEEEEecCC
Q psy10285 245 VDILIIGGGAIGSSIAYFIKEKVLDGCRVAVVDRDF 280 (673)
Q Consensus 245 ~~v~iiG~G~~g~~~A~~l~~~~~~g~~v~~ie~~~ 280 (673)
.+|.|||+|..|...|..|+ +.|.+|+++.|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~---~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQ---RSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHH---HTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHH---HCCCeEEEEEcCc
Confidence 57999999999999999999 7899999999865
No 499
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=81.68 E-value=2 Score=44.01 Aligned_cols=33 Identities=30% Similarity=0.272 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhcCCCc--eEEEEeccc
Q psy10285 101 VDILIIGGGAIGSSIAYFIKEKVLDGC--RVAVVDRDF 136 (673)
Q Consensus 101 ~dvviiG~G~~G~~~A~~l~~~~~~g~--~v~vie~~~ 136 (673)
..|.|||+|.+|.++|+.|+.. |+ .|+++|.+.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~---g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK---DLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH---CCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCCCeEEEEECCH
Confidence 4799999999999999999999 76 899999753
No 500
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=81.68 E-value=1.2 Score=45.48 Aligned_cols=32 Identities=38% Similarity=0.552 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHhcCCCc--eEEEEeccc
Q psy10285 102 DILIIGGGAIGSSIAYFIKEKVLDGC--RVAVVDRDF 136 (673)
Q Consensus 102 dvviiG~G~~G~~~A~~l~~~~~~g~--~v~vie~~~ 136 (673)
.|.|||+|.+|.+.|..|++. |. +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~---g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK---GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC---CCCCeEEEEeCCh
Confidence 489999999999999999999 88 999999864
Done!