Query psy10286
Match_columns 748
No_of_seqs 580 out of 3729
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 22:34:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10286.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10286hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 100.0 1.6E-50 5.5E-55 422.2 38.4 293 411-744 5-300 (302)
2 1zgk_A Kelch-like ECH-associat 100.0 2.8E-50 9.7E-55 421.3 36.8 269 474-742 36-308 (308)
3 2vpj_A Kelch-like protein 12; 100.0 4.7E-50 1.6E-54 418.5 35.0 270 474-743 28-300 (301)
4 3ii7_A Kelch-like protein 7; p 100.0 1.2E-49 4.2E-54 416.3 36.4 268 476-744 23-295 (306)
5 2woz_A Kelch repeat and BTB do 100.0 8.9E-46 3E-50 389.1 31.9 283 412-743 6-307 (318)
6 4asc_A Kelch repeat and BTB do 100.0 1.5E-45 5.2E-50 386.8 30.3 263 478-743 14-297 (315)
7 2uvk_A YJHT; unknown function, 100.0 8.8E-42 3E-46 365.0 30.1 255 478-732 32-353 (357)
8 1zgk_A Kelch-like ECH-associat 100.0 1E-41 3.6E-46 356.3 29.7 248 494-742 10-261 (308)
9 2xn4_A Kelch-like protein 2; s 100.0 3.3E-41 1.1E-45 351.7 33.2 261 439-699 31-302 (302)
10 4asc_A Kelch repeat and BTB do 100.0 1.3E-41 4.5E-46 356.8 25.6 227 476-704 66-305 (315)
11 3ii7_A Kelch-like protein 7; p 100.0 8.6E-41 2.9E-45 349.2 30.9 280 412-697 4-295 (306)
12 2vpj_A Kelch-like protein 12; 100.0 3.7E-40 1.3E-44 343.5 32.2 284 411-696 6-300 (301)
13 3i3n_A Kelch-like protein 11; 100.0 9.6E-42 3.3E-46 349.1 18.9 263 49-402 7-272 (279)
14 2woz_A Kelch repeat and BTB do 100.0 7.5E-41 2.6E-45 351.6 26.2 226 477-704 78-315 (318)
15 3hve_A Gigaxonin; ubiquitin, c 100.0 2.4E-41 8.1E-46 341.9 10.3 248 49-391 6-254 (256)
16 2uvk_A YJHT; unknown function, 100.0 7.3E-39 2.5E-43 342.4 27.1 248 491-742 2-315 (357)
17 2zwa_A Leucine carboxyl methyl 100.0 6E-39 2.1E-43 370.0 15.7 243 476-721 411-694 (695)
18 2zwa_A Leucine carboxyl methyl 100.0 3.4E-35 1.2E-39 338.7 28.5 249 488-742 378-663 (695)
19 1k3i_A Galactose oxidase precu 100.0 1.1E-35 3.8E-40 343.0 20.7 298 440-742 168-518 (656)
20 1k3i_A Galactose oxidase precu 100.0 2E-34 6.7E-39 332.6 24.5 299 421-720 197-548 (656)
21 3htm_A Speckle-type POZ protei 99.9 7.8E-27 2.7E-31 220.7 11.4 155 57-308 17-171 (172)
22 2z8h_A Transcription regulator 99.9 2.9E-25 1E-29 200.5 10.9 128 47-210 9-137 (138)
23 2if5_A Zinc finger and BTB dom 99.9 9.1E-25 3.1E-29 192.6 9.8 118 52-203 3-120 (120)
24 4eoz_A Speckle-type POZ protei 99.9 3.6E-25 1.2E-29 202.8 6.1 134 59-226 10-143 (145)
25 2ppi_A Gigaxonin; BTB domain, 99.9 9E-25 3.1E-29 198.3 8.2 125 47-203 20-144 (144)
26 3b84_A Zinc finger and BTB dom 99.9 1.4E-24 4.6E-29 190.7 8.3 115 53-205 3-117 (119)
27 3hqi_A Speckle-type POZ protei 99.9 2.6E-24 8.9E-29 223.8 11.8 154 58-308 158-311 (312)
28 1r29_A B-cell lymphoma 6 prote 99.9 3.6E-24 1.2E-28 190.7 10.2 122 49-205 4-126 (127)
29 3ohu_A Transcription regulator 99.9 1.2E-24 4.2E-29 193.1 6.7 119 48-202 6-125 (125)
30 2ihc_A Transcription regulator 99.9 1.8E-24 6.1E-29 191.4 7.2 120 48-203 3-123 (124)
31 2yy9_A Zinc finger and BTB dom 99.9 2.2E-24 7.6E-29 193.7 7.8 117 54-208 5-121 (135)
32 2vpk_A Myoneurin; transcriptio 99.9 4.8E-24 1.6E-28 186.6 9.2 115 54-204 2-116 (116)
33 1buo_A POZ domain, protein (pr 99.9 8.8E-24 3E-28 186.2 10.3 117 50-205 4-120 (121)
34 3ga1_A Nucleus accumbens-assoc 99.9 6.3E-24 2.2E-28 189.5 7.2 120 48-205 7-127 (129)
35 2q81_A MIZ-1 protein; BTB/POZ 99.9 9E-24 3.1E-28 185.4 7.8 113 52-203 5-117 (119)
36 2vkp_A BTB/POZ domain-containi 99.9 3E-23 1E-27 179.6 6.5 104 68-206 2-109 (109)
37 3m5b_A Zinc finger and BTB dom 99.9 5.4E-22 1.9E-26 173.1 8.2 104 56-204 14-117 (119)
38 3fkc_A Transcriptional regulat 99.9 7.7E-22 2.6E-26 171.8 8.7 110 48-196 5-115 (116)
39 2eqx_A Kelch repeat and BTB do 99.5 1.2E-15 4.2E-20 129.2 1.3 95 266-363 5-99 (105)
40 2ast_A S-phase kinase-associat 99.3 7.2E-13 2.5E-17 121.3 6.6 105 77-216 3-136 (159)
41 4ajy_C Transcription elongatio 99.1 8.2E-11 2.8E-15 97.6 6.2 80 77-191 4-97 (97)
42 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 8.1E-10 2.8E-14 98.5 6.8 101 77-216 4-131 (141)
43 2p1m_A SKP1-like protein 1A; F 98.8 1.5E-09 5.1E-14 99.1 1.5 95 77-209 6-128 (160)
44 4eoz_A Speckle-type POZ protei 98.7 1.1E-09 3.7E-14 99.4 0.1 71 220-290 74-144 (145)
45 3dsm_A Uncharacterized protein 98.5 5.1E-05 1.7E-09 78.7 28.6 262 437-721 16-302 (328)
46 3dsm_A Uncharacterized protein 98.5 0.00016 5.5E-09 74.9 30.9 223 476-725 16-257 (328)
47 2z8h_A Transcription regulator 98.3 1.5E-07 5.1E-12 84.1 2.0 54 220-273 84-137 (138)
48 3mbr_X Glutamine cyclotransfer 98.3 0.00038 1.3E-08 67.5 25.3 191 493-704 13-223 (243)
49 2vkp_A BTB/POZ domain-containi 98.3 1.1E-07 3.6E-12 81.3 -0.4 50 220-269 60-109 (109)
50 2yy9_A Zinc finger and BTB dom 98.2 3.8E-07 1.3E-11 81.0 2.3 52 220-271 70-121 (135)
51 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.0029 9.8E-08 66.6 32.3 259 420-726 52-344 (376)
52 3drz_A BTB/POZ domain-containi 98.1 6.3E-06 2.2E-10 69.3 8.1 98 76-204 7-106 (107)
53 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0026 8.8E-08 67.0 30.5 253 420-719 102-376 (376)
54 3b84_A Zinc finger and BTB dom 98.1 7.2E-07 2.5E-11 77.3 2.2 47 221-267 70-116 (119)
55 2if5_A Zinc finger and BTB dom 98.1 2.2E-07 7.5E-12 80.8 -1.2 47 220-266 74-120 (120)
56 1hv2_A Elongin C, ELC1; protei 98.1 4E-06 1.4E-10 69.2 6.4 80 76-191 5-99 (99)
57 1l0q_A Surface layer protein; 98.1 0.00028 9.7E-09 74.6 22.7 264 423-725 3-279 (391)
58 2fnj_C Transcription elongatio 98.1 3.2E-06 1.1E-10 69.4 5.2 80 77-191 3-96 (96)
59 1r29_A B-cell lymphoma 6 prote 98.1 4.7E-07 1.6E-11 79.6 -0.1 49 219-267 77-125 (127)
60 3nol_A Glutamine cyclotransfer 98.0 0.0004 1.4E-08 67.9 20.2 195 489-704 31-244 (262)
61 2ppi_A Gigaxonin; BTB domain, 98.0 3.2E-07 1.1E-11 82.5 -2.9 47 219-265 97-143 (144)
62 3mbr_X Glutamine cyclotransfer 98.0 0.00098 3.3E-08 64.6 20.8 157 547-724 22-182 (243)
63 3v7d_A Suppressor of kinetocho 97.9 1.3E-05 4.3E-10 73.5 6.6 99 76-205 8-132 (169)
64 2vpk_A Myoneurin; transcriptio 97.9 1.1E-06 3.7E-11 75.8 -0.6 47 220-266 69-115 (116)
65 2ihc_A Transcription regulator 97.9 8.2E-07 2.8E-11 77.6 -1.6 47 220-266 77-123 (124)
66 2z2n_A Virginiamycin B lyase; 97.9 0.014 4.8E-07 58.5 29.4 262 421-723 25-297 (299)
67 2iwa_A Glutamine cyclotransfer 97.8 0.0057 1.9E-07 60.4 24.3 194 502-721 24-237 (266)
68 3vgz_A Uncharacterized protein 97.8 0.028 9.4E-07 57.9 29.9 219 477-726 69-308 (353)
69 3nol_A Glutamine cyclotransfer 97.7 0.00099 3.4E-08 65.1 16.9 156 549-725 46-205 (262)
70 3i3n_A Kelch-like protein 11; 97.7 9.1E-06 3.1E-10 82.2 2.2 89 124-270 51-140 (279)
71 2z2n_A Virginiamycin B lyase; 97.7 0.048 1.6E-06 54.5 30.1 219 477-727 36-260 (299)
72 3ohu_A Transcription regulator 97.7 2E-06 7E-11 75.2 -2.9 46 220-265 80-125 (125)
73 2q81_A MIZ-1 protein; BTB/POZ 97.7 3.6E-05 1.2E-09 66.5 5.0 49 218-266 69-117 (119)
74 3nok_A Glutaminyl cyclase; bet 97.7 0.0038 1.3E-07 61.0 19.8 179 502-704 58-254 (268)
75 1l0q_A Surface layer protein; 97.7 0.0016 5.4E-08 68.8 18.9 216 476-724 11-236 (391)
76 2qc5_A Streptogramin B lactona 97.7 0.04 1.4E-06 55.1 28.7 258 421-720 30-299 (300)
77 3bws_A Protein LP49; two-domai 97.6 0.016 5.5E-07 61.8 26.8 266 439-726 102-395 (433)
78 3bws_A Protein LP49; two-domai 97.6 0.0089 3E-07 63.9 24.5 271 421-720 133-431 (433)
79 3htm_A Speckle-type POZ protei 97.6 1.8E-05 6.3E-10 73.5 2.7 47 220-266 83-129 (172)
80 1ri6_A Putative isomerase YBHE 97.6 0.029 9.8E-07 57.4 27.2 242 477-743 60-332 (343)
81 1buo_A POZ domain, protein (pr 97.6 5.3E-05 1.8E-09 65.6 5.0 72 195-267 47-119 (121)
82 3hfq_A Uncharacterized protein 97.6 0.014 4.9E-07 60.2 24.8 281 426-729 6-327 (347)
83 1k8k_C P40, ARP2/3 complex 41 97.6 0.0086 3E-07 62.3 23.1 228 476-731 29-286 (372)
84 2qc5_A Streptogramin B lactona 97.6 0.07 2.4E-06 53.2 29.2 218 476-727 40-265 (300)
85 3jrp_A Fusion protein of prote 97.6 0.004 1.4E-07 65.0 20.2 231 477-732 33-299 (379)
86 3hve_A Gigaxonin; ubiquitin, c 97.5 1.2E-05 4E-10 80.2 -0.2 66 219-296 81-146 (256)
87 1vcb_B Protein (elongin C); tu 97.5 0.0001 3.5E-09 62.1 5.0 81 76-191 18-112 (112)
88 3vgz_A Uncharacterized protein 97.5 0.086 2.9E-06 54.1 28.5 258 421-704 52-333 (353)
89 1rwi_B Serine/threonine-protei 97.4 0.012 4E-07 58.3 20.7 216 476-722 45-265 (270)
90 3m5b_A Zinc finger and BTB dom 97.4 0.00012 4.2E-09 62.9 5.0 49 219-267 69-117 (119)
91 2ovr_B FBW7, F-BOX/WD repeat p 97.4 0.031 1.1E-06 60.0 25.5 265 421-725 128-395 (445)
92 2iwa_A Glutamine cyclotransfer 97.4 0.018 6E-07 56.9 21.0 155 549-724 24-184 (266)
93 3nok_A Glutaminyl cyclase; bet 97.4 0.0067 2.3E-07 59.3 17.5 152 549-724 58-213 (268)
94 3v9f_A Two-component system se 97.4 0.018 6E-07 67.2 24.3 217 477-728 383-618 (781)
95 2ovr_B FBW7, F-BOX/WD repeat p 97.3 0.067 2.3E-06 57.3 26.8 267 422-722 169-443 (445)
96 1q7f_A NHL, brain tumor CG1071 97.3 0.16 5.4E-06 50.5 30.6 220 477-721 51-280 (286)
97 4a2l_A BT_4663, two-component 97.3 0.04 1.4E-06 64.3 26.5 215 477-728 377-621 (795)
98 1p22_A F-BOX/WD-repeat protein 97.3 0.0069 2.4E-07 65.1 18.4 267 420-726 141-419 (435)
99 3ga1_A Nucleus accumbens-assoc 97.3 6.3E-05 2.1E-09 66.0 1.4 74 195-268 52-127 (129)
100 3ow8_A WD repeat-containing pr 97.2 0.041 1.4E-06 56.2 22.6 185 508-723 91-281 (321)
101 3hqi_A Speckle-type POZ protei 97.2 2.3E-05 7.8E-10 80.6 -2.3 46 220-265 223-268 (312)
102 3v9f_A Two-component system se 97.2 0.044 1.5E-06 63.8 25.4 245 440-721 385-656 (781)
103 4ery_A WD repeat-containing pr 97.2 0.17 6E-06 50.9 27.0 226 421-676 34-270 (312)
104 4aez_A CDC20, WD repeat-contai 97.2 0.048 1.6E-06 57.6 23.3 255 439-723 114-382 (401)
105 2z3z_A Dipeptidyl aminopeptida 97.2 0.055 1.9E-06 62.0 25.2 274 438-723 101-437 (706)
106 4ery_A WD repeat-containing pr 97.1 0.1 3.5E-06 52.6 24.4 217 477-723 45-270 (312)
107 4a2l_A BT_4663, two-component 97.1 0.06 2.1E-06 62.8 25.3 233 440-704 379-648 (795)
108 3scy_A Hypothetical bacterial 97.1 0.069 2.4E-06 55.3 23.3 284 423-728 14-346 (361)
109 1got_B GT-beta; complex (GTP-b 97.1 0.15 5.3E-06 52.2 25.7 255 421-707 66-334 (340)
110 3u4y_A Uncharacterized protein 97.1 0.081 2.8E-06 53.8 23.3 279 421-730 9-313 (331)
111 3drx_A BTB/POZ domain-containi 97.1 0.00057 2E-08 63.2 5.9 98 76-204 13-112 (202)
112 3dwl_C Actin-related protein 2 97.1 0.011 3.8E-07 61.7 16.6 231 475-732 31-292 (377)
113 2eqx_A Kelch repeat and BTB do 97.0 0.00019 6.5E-09 60.1 2.0 86 173-310 7-99 (105)
114 3v7d_B Cell division control p 97.0 0.31 1.1E-05 52.2 28.4 267 421-726 131-426 (464)
115 1k8k_C P40, ARP2/3 complex 41 97.0 0.16 5.6E-06 52.3 25.1 233 421-682 19-284 (372)
116 3odt_A Protein DOA1; ubiquitin 97.0 0.13 4.5E-06 51.5 23.4 191 507-730 112-305 (313)
117 1p22_A F-BOX/WD-repeat protein 97.0 0.032 1.1E-06 59.7 19.4 212 477-721 153-365 (435)
118 3v7d_B Cell division control p 97.0 0.32 1.1E-05 52.2 27.5 185 507-719 278-463 (464)
119 3zwl_B Eukaryotic translation 96.9 0.072 2.5E-06 54.8 21.5 275 421-723 43-348 (369)
120 4aez_A CDC20, WD repeat-contai 96.9 0.1 3.6E-06 55.0 23.0 223 477-727 113-342 (401)
121 1rwi_B Serine/threonine-protei 96.9 0.063 2.1E-06 52.8 20.0 187 508-724 34-225 (270)
122 3fkc_A Transcriptional regulat 96.9 0.00021 7E-09 61.2 1.3 40 220-259 75-115 (116)
123 1q7f_A NHL, brain tumor CG1071 96.9 0.38 1.3E-05 47.6 26.6 194 508-725 40-242 (286)
124 1pby_B Quinohemoprotein amine 96.9 0.047 1.6E-06 55.6 19.3 259 439-724 12-313 (337)
125 3jro_A Fusion protein of prote 96.9 0.014 4.8E-07 67.7 16.8 230 477-731 31-296 (753)
126 2hqs_A Protein TOLB; TOLB, PAL 96.9 0.057 1.9E-06 57.5 20.3 229 477-729 159-395 (415)
127 1got_B GT-beta; complex (GTP-b 96.9 0.27 9.4E-06 50.3 24.8 216 477-723 77-303 (340)
128 3jrp_A Fusion protein of prote 96.8 0.078 2.7E-06 54.9 20.7 190 508-722 22-241 (379)
129 1gxr_A ESG1, transducin-like e 96.8 0.22 7.7E-06 50.3 23.9 212 475-719 117-335 (337)
130 1r5m_A SIR4-interacting protei 96.8 0.038 1.3E-06 58.3 18.6 225 421-676 119-363 (425)
131 1pjx_A Dfpase, DIISOPROPYLFLUO 96.8 0.15 5.2E-06 51.3 22.3 220 477-723 46-301 (314)
132 3no2_A Uncharacterized protein 96.8 0.35 1.2E-05 48.0 24.2 222 475-726 13-259 (276)
133 2ojh_A Uncharacterized protein 96.8 0.061 2.1E-06 53.2 18.9 229 475-727 20-264 (297)
134 2ojh_A Uncharacterized protein 96.8 0.033 1.1E-06 55.3 16.8 229 437-681 21-265 (297)
135 2z3z_A Dipeptidyl aminopeptida 96.8 0.09 3.1E-06 60.2 22.5 239 477-728 101-398 (706)
136 3c5m_A Oligogalacturonate lyas 96.8 0.16 5.4E-06 53.0 22.8 273 438-727 60-390 (396)
137 2ecf_A Dipeptidyl peptidase IV 96.8 0.082 2.8E-06 60.9 22.1 283 421-722 47-416 (741)
138 4aow_A Guanine nucleotide-bind 96.7 0.23 8E-06 50.3 23.2 219 477-723 108-339 (340)
139 2bkl_A Prolyl endopeptidase; m 96.7 0.18 6E-06 57.8 24.3 280 437-728 93-404 (695)
140 3u4y_A Uncharacterized protein 96.7 0.052 1.8E-06 55.3 17.9 224 475-727 18-258 (331)
141 3ow8_A WD repeat-containing pr 96.7 0.17 5.9E-06 51.5 21.8 210 476-719 101-319 (321)
142 2xdw_A Prolyl endopeptidase; a 96.7 1.3 4.3E-05 50.7 31.4 237 477-727 151-422 (710)
143 1gxr_A ESG1, transducin-like e 96.7 0.17 5.9E-06 51.2 21.7 220 476-725 71-300 (337)
144 3pe7_A Oligogalacturonate lyas 96.7 0.093 3.2E-06 54.8 19.9 280 438-725 60-388 (388)
145 2dg1_A DRP35, lactonase; beta 96.7 0.2 6.7E-06 51.0 21.9 230 476-720 65-315 (333)
146 3hfq_A Uncharacterized protein 96.6 0.067 2.3E-06 55.0 18.0 229 477-728 18-279 (347)
147 2pbi_B Guanine nucleotide-bind 96.6 0.55 1.9E-05 48.4 24.9 175 508-707 165-348 (354)
148 2hes_X YDR267CP; beta-propelle 96.6 0.23 7.8E-06 50.7 21.7 196 508-728 69-287 (330)
149 1r5m_A SIR4-interacting protei 96.6 0.12 4.1E-06 54.3 20.1 216 476-723 129-363 (425)
150 3fvz_A Peptidyl-glycine alpha- 96.6 0.8 2.7E-05 46.5 29.5 226 477-721 69-322 (329)
151 3vl1_A 26S proteasome regulato 96.5 0.38 1.3E-05 50.6 23.8 218 474-721 116-365 (420)
152 3mkq_A Coatomer beta'-subunit; 96.5 0.18 6.2E-06 58.6 23.0 218 477-724 35-262 (814)
153 1vyh_C Platelet-activating fac 96.5 0.18 6E-06 53.5 21.0 257 421-719 119-409 (410)
154 1kb0_A Quinohemoprotein alcoho 96.5 0.6 2.1E-05 53.0 26.5 118 504-633 73-207 (677)
155 4g56_B MGC81050 protein; prote 96.5 0.1 3.6E-06 54.1 18.7 215 477-721 115-343 (357)
156 1sq9_A Antiviral protein SKI8; 96.5 0.23 7.9E-06 51.8 21.6 184 476-677 90-325 (397)
157 2hqs_A Protein TOLB; TOLB, PAL 96.5 0.22 7.4E-06 52.9 21.5 227 438-682 159-395 (415)
158 3c5m_A Oligogalacturonate lyas 96.5 0.16 5.4E-06 53.0 19.9 234 477-727 60-335 (396)
159 2vdu_B TRNA (guanine-N(7)-)-me 96.4 0.53 1.8E-05 50.3 24.4 199 508-726 160-398 (450)
160 2xbg_A YCF48-like protein; pho 96.4 0.95 3.2E-05 46.1 25.2 264 421-727 46-325 (327)
161 3dwl_C Actin-related protein 2 96.4 0.043 1.5E-06 57.2 15.2 234 421-681 22-288 (377)
162 3bg1_A Protein SEC13 homolog; 96.4 0.07 2.4E-06 54.2 16.3 232 477-735 35-308 (316)
163 1ri6_A Putative isomerase YBHE 96.4 0.42 1.5E-05 48.4 22.5 228 477-729 15-272 (343)
164 2ad6_A Methanol dehydrogenase 96.4 0.64 2.2E-05 51.6 25.2 119 504-633 58-193 (571)
165 2ynn_A Coatomer subunit beta'; 96.4 0.32 1.1E-05 48.9 21.1 215 477-724 35-262 (304)
166 3f3f_A Nucleoporin SEH1; struc 96.4 0.34 1.2E-05 49.0 21.5 178 477-674 33-249 (351)
167 3fm0_A Protein CIAO1; WDR39,SG 96.4 0.092 3.2E-06 54.1 17.1 179 508-706 27-215 (345)
168 3e5z_A Putative gluconolactona 96.4 0.29 9.7E-06 48.9 20.4 215 476-725 49-290 (296)
169 2ynn_A Coatomer subunit beta'; 96.4 0.26 9E-06 49.5 20.2 225 421-678 24-263 (304)
170 4a11_B DNA excision repair pro 96.3 0.19 6.5E-06 52.5 19.8 218 476-722 121-366 (408)
171 3mkq_A Coatomer beta'-subunit; 96.3 0.37 1.3E-05 56.0 24.0 226 422-677 25-262 (814)
172 2pm7_B Protein transport prote 96.3 0.34 1.2E-05 48.5 20.6 197 509-730 67-295 (297)
173 3vl1_A 26S proteasome regulato 96.3 0.26 8.9E-06 51.9 20.7 216 477-723 78-324 (420)
174 4gga_A P55CDC, cell division c 96.3 0.28 9.6E-06 52.0 20.9 219 477-723 125-355 (420)
175 1vyh_C Platelet-activating fac 96.3 0.23 7.8E-06 52.6 19.9 213 477-723 130-371 (410)
176 3jro_A Fusion protein of prote 96.3 0.091 3.1E-06 60.8 18.1 190 508-722 20-239 (753)
177 2aq5_A Coronin-1A; WD40 repeat 96.3 0.59 2E-05 49.0 23.2 194 508-723 93-301 (402)
178 3scy_A Hypothetical bacterial 96.2 0.16 5.6E-06 52.4 18.3 232 478-730 30-302 (361)
179 3zwl_B Eukaryotic translation 96.2 0.34 1.2E-05 49.6 20.6 224 477-723 54-306 (369)
180 3fm0_A Protein CIAO1; WDR39,SG 96.2 0.29 9.8E-06 50.3 19.9 169 477-660 38-216 (345)
181 2pbi_B Guanine nucleotide-bind 96.2 0.54 1.9E-05 48.4 22.0 217 477-723 86-317 (354)
182 2fp8_A Strictosidine synthase; 96.2 1 3.5E-05 45.6 23.6 225 477-723 40-315 (322)
183 4gqb_B Methylosome protein 50; 96.2 0.17 5.7E-06 52.2 17.7 215 477-722 103-332 (344)
184 1jmx_B Amine dehydrogenase; ox 96.1 0.26 8.9E-06 50.2 19.2 143 476-631 20-179 (349)
185 1nir_A Nitrite reductase; hemo 96.1 0.25 8.4E-06 54.6 20.0 227 476-731 158-417 (543)
186 3no2_A Uncharacterized protein 96.1 0.66 2.3E-05 45.9 21.4 186 508-727 4-203 (276)
187 1pgu_A Actin interacting prote 96.1 0.71 2.4E-05 51.3 24.2 269 421-722 29-329 (615)
188 3azo_A Aminopeptidase; POP fam 96.1 0.42 1.4E-05 54.0 22.3 239 476-727 101-375 (662)
189 1nir_A Nitrite reductase; hemo 96.1 0.51 1.7E-05 52.1 22.0 276 420-723 147-460 (543)
190 3g4e_A Regucalcin; six bladed 96.0 0.37 1.3E-05 48.3 19.3 206 475-706 33-263 (297)
191 3g4e_A Regucalcin; six bladed 96.0 0.39 1.3E-05 48.1 19.3 195 508-731 24-239 (297)
192 3iuj_A Prolyl endopeptidase; h 96.0 1.1 3.9E-05 50.9 25.3 241 473-729 151-413 (693)
193 2ast_A S-phase kinase-associat 96.0 0.0037 1.3E-07 56.5 3.5 87 189-275 13-132 (159)
194 1yiq_A Quinohemoprotein alcoho 96.0 1.4 4.9E-05 50.0 25.8 117 505-633 67-200 (689)
195 3b7f_A Glycosyl hydrolase, BNR 96.0 1.4 4.9E-05 46.0 24.3 233 479-732 33-334 (394)
196 2p4o_A Hypothetical protein; p 96.0 1.5 5.3E-05 43.9 24.6 204 476-704 52-277 (306)
197 1pby_B Quinohemoprotein amine 95.9 0.35 1.2E-05 48.8 18.9 141 477-632 11-168 (337)
198 1kv9_A Type II quinohemoprotei 95.9 1.8 6.1E-05 49.0 26.2 118 504-633 62-195 (668)
199 1npe_A Nidogen, entactin; glyc 95.9 1.4 4.8E-05 43.1 28.3 219 478-725 11-242 (267)
200 1qhu_A Protein (hemopexin); be 95.9 1.3 4.6E-05 47.0 23.0 200 478-720 168-437 (460)
201 2pm9_A Protein WEB1, protein t 95.8 0.42 1.4E-05 50.1 19.4 184 473-675 132-338 (416)
202 4gga_A P55CDC, cell division c 95.8 0.62 2.1E-05 49.2 20.8 254 439-721 126-395 (420)
203 2p4o_A Hypothetical protein; p 95.8 1.8 6.1E-05 43.4 25.2 208 488-725 21-245 (306)
204 2hes_X YDR267CP; beta-propelle 95.8 0.31 1.1E-05 49.7 17.7 189 508-721 118-328 (330)
205 3pe7_A Oligogalacturonate lyas 95.8 0.34 1.2E-05 50.3 18.3 243 477-728 60-336 (388)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 95.7 0.56 1.9E-05 47.0 19.2 216 438-675 46-300 (314)
207 2xdw_A Prolyl endopeptidase; a 95.7 1.3 4.5E-05 50.5 24.4 243 477-727 98-375 (710)
208 1yfq_A Cell cycle arrest prote 95.7 0.87 3E-05 46.0 20.8 210 474-708 76-315 (342)
209 3iz6_a 40S ribosomal protein R 95.7 1 3.5E-05 46.8 21.6 186 510-722 171-376 (380)
210 1qks_A Cytochrome CD1 nitrite 95.7 0.86 2.9E-05 50.4 21.6 229 475-731 175-436 (567)
211 2dg1_A DRP35, lactonase; beta 95.7 0.68 2.3E-05 46.9 19.7 200 508-726 55-268 (333)
212 1erj_A Transcriptional repress 95.7 1.4 4.7E-05 46.0 22.6 215 475-719 143-387 (393)
213 1pex_A Collagenase-3, MMP-13; 95.7 0.72 2.4E-05 43.3 17.9 144 503-678 28-196 (207)
214 1w6s_A Methanol dehydrogenase 95.6 1.1 3.8E-05 49.8 22.4 120 504-634 58-200 (599)
215 3mmy_A MRNA export factor; mRN 95.6 0.96 3.3E-05 46.1 20.8 187 508-724 97-307 (368)
216 3b7f_A Glycosyl hydrolase, BNR 95.6 1.9 6.5E-05 45.0 23.3 187 525-732 32-274 (394)
217 3kvt_A Potassium channel prote 95.6 0.0036 1.2E-07 52.8 1.5 86 76-195 6-93 (115)
218 2ecf_A Dipeptidyl peptidase IV 95.6 0.66 2.3E-05 53.2 21.3 191 525-727 264-465 (741)
219 2xbg_A YCF48-like protein; pho 95.6 2.3 8E-05 43.1 27.9 218 479-728 58-286 (327)
220 3i2n_A WD repeat-containing pr 95.6 0.51 1.7E-05 48.1 18.4 225 421-674 30-291 (357)
221 2pm9_A Protein WEB1, protein t 95.5 0.78 2.7E-05 48.0 20.2 261 438-723 45-339 (416)
222 3ei3_B DNA damage-binding prot 95.5 0.34 1.2E-05 50.4 17.0 183 510-722 87-283 (383)
223 1itv_A MMP9; adaptive molecula 95.4 1 3.5E-05 41.9 17.9 144 503-676 11-176 (195)
224 1qhu_A Protein (hemopexin); be 95.4 0.61 2.1E-05 49.6 18.3 173 508-721 158-385 (460)
225 1ijq_A LDL receptor, low-densi 95.4 2.6 8.9E-05 42.5 27.3 213 477-722 10-239 (316)
226 1s1g_A Potassium voltage-gated 95.4 0.013 4.3E-07 50.2 4.2 91 75-199 13-105 (124)
227 2bkl_A Prolyl endopeptidase; m 95.4 0.56 1.9E-05 53.5 19.5 242 476-726 93-356 (695)
228 4ggc_A P55CDC, cell division c 95.4 1.9 6.5E-05 42.8 21.6 222 477-723 45-275 (318)
229 1sq9_A Antiviral protein SKI8; 95.3 1.3 4.3E-05 46.0 20.9 192 510-724 82-325 (397)
230 1pex_A Collagenase-3, MMP-13; 95.3 1.6 5.3E-05 41.0 18.9 144 550-725 28-196 (207)
231 2aq5_A Coronin-1A; WD40 repeat 95.3 0.54 1.8E-05 49.3 17.7 189 476-681 103-308 (402)
232 3e5z_A Putative gluconolactona 95.2 1.8 6E-05 43.0 20.7 222 422-677 40-289 (296)
233 3k26_A Polycomb protein EED; W 95.2 2.7 9.1E-05 42.6 22.6 188 508-721 127-366 (366)
234 4gqb_B Methylosome protein 50; 95.1 0.4 1.4E-05 49.3 15.7 191 505-724 89-292 (344)
235 1nn7_A Potassium channel KV4.2 95.1 0.0081 2.8E-07 49.8 2.0 89 77-199 2-92 (105)
236 2gop_A Trilobed protease; beta 95.1 3 0.0001 42.2 22.4 222 477-729 85-338 (347)
237 3odt_A Protein DOA1; ubiquitin 95.1 1.7 5.7E-05 43.1 20.0 215 477-725 39-259 (313)
238 3sfz_A APAF-1, apoptotic pepti 95.0 0.16 5.4E-06 62.5 14.4 248 439-719 984-1247(1249)
239 3ott_A Two-component system se 95.0 3.3 0.00011 47.6 24.9 182 508-727 73-266 (758)
240 1flg_A Protein (quinoprotein e 95.0 4.1 0.00014 45.1 24.4 116 504-632 64-200 (582)
241 1erj_A Transcriptional repress 95.0 2.4 8.2E-05 44.1 21.7 188 508-723 134-343 (393)
242 3v65_B Low-density lipoprotein 94.9 4.2 0.00014 42.3 26.0 212 477-722 96-319 (386)
243 3sfz_A APAF-1, apoptotic pepti 94.9 0.17 5.7E-06 62.3 14.2 218 475-724 981-1210(1249)
244 3hxj_A Pyrrolo-quinoline quino 94.9 1.7 5.7E-05 43.7 19.7 237 439-726 41-290 (330)
245 2ghs_A AGR_C_1268P; regucalcin 94.9 3 0.0001 42.2 21.5 202 477-706 71-293 (326)
246 3hrp_A Uncharacterized protein 94.8 2.7 9.1E-05 44.3 21.5 227 465-719 140-408 (409)
247 2gop_A Trilobed protease; beta 94.8 1.1 3.8E-05 45.5 18.2 216 476-718 42-290 (347)
248 1yfq_A Cell cycle arrest prote 94.7 2.2 7.7E-05 42.9 20.2 219 477-724 33-285 (342)
249 2pm7_B Protein transport prote 94.7 0.72 2.4E-05 46.0 16.0 188 508-721 20-238 (297)
250 3ott_A Two-component system se 94.7 1.7 5.8E-05 50.0 21.2 209 477-720 392-625 (758)
251 1itv_A MMP9; adaptive molecula 94.7 2.7 9.2E-05 39.0 18.5 145 550-724 11-177 (195)
252 1pgu_A Actin interacting prote 94.7 1.9 6.6E-05 47.6 21.1 221 477-725 39-287 (615)
253 3fvz_A Peptidyl-glycine alpha- 94.7 4.2 0.00014 41.0 30.0 189 524-726 69-282 (329)
254 1yr2_A Prolyl oligopeptidase; 94.7 4.1 0.00014 46.7 24.2 239 477-729 189-449 (741)
255 2oiz_A Aromatic amine dehydrog 94.6 3.5 0.00012 42.4 21.3 71 649-729 265-342 (361)
256 1jmx_B Amine dehydrogenase; ox 94.5 0.97 3.3E-05 45.8 16.9 153 508-678 10-179 (349)
257 3azo_A Aminopeptidase; POP fam 94.5 2.5 8.5E-05 47.6 21.8 190 477-680 161-375 (662)
258 4ggc_A P55CDC, cell division c 94.5 3.5 0.00012 40.8 20.9 255 439-720 46-314 (318)
259 2nz0_B Potassium voltage-gated 94.5 0.018 6.2E-07 50.3 2.9 86 75-194 35-121 (140)
260 2ad6_A Methanol dehydrogenase 94.5 1.7 5.9E-05 48.1 19.8 119 551-680 58-193 (571)
261 1t1d_A Protein (potassium chan 94.4 0.022 7.4E-07 46.6 3.0 85 77-195 3-90 (100)
262 4e54_B DNA damage-binding prot 94.4 0.26 8.7E-06 52.6 12.4 187 508-722 131-328 (435)
263 1kb0_A Quinohemoprotein alcoho 94.3 2.2 7.4E-05 48.4 20.5 118 551-680 73-207 (677)
264 4aow_A Guanine nucleotide-bind 94.3 4.1 0.00014 40.8 20.8 186 508-723 97-288 (340)
265 2ghs_A AGR_C_1268P; regucalcin 94.2 4.6 0.00016 40.8 20.9 187 508-725 60-264 (326)
266 2p1m_A SKP1-like protein 1A; F 94.2 0.0093 3.2E-07 53.9 0.3 56 218-273 47-129 (160)
267 3bg1_A Protein SEC13 homolog; 94.2 0.7 2.4E-05 46.6 14.6 189 508-721 24-247 (316)
268 1k32_A Tricorn protease; prote 94.2 8.4 0.00029 46.0 26.4 102 618-727 358-467 (1045)
269 1qks_A Cytochrome CD1 nitrite 94.2 6.1 0.00021 43.5 23.1 285 421-727 208-544 (567)
270 3dr2_A Exported gluconolactona 94.1 1.6 5.5E-05 43.7 17.0 216 474-719 64-304 (305)
271 4g56_B MGC81050 protein; prote 93.9 0.55 1.9E-05 48.5 13.5 188 508-725 105-305 (357)
272 3v64_C Agrin; beta propeller, 93.8 6.6 0.00023 40.1 27.3 212 477-722 53-276 (349)
273 3ei3_B DNA damage-binding prot 93.8 1.9 6.4E-05 44.6 17.5 174 477-675 96-283 (383)
274 1yr2_A Prolyl oligopeptidase; 93.7 7.2 0.00024 44.6 23.6 240 477-727 133-401 (741)
275 2xzm_R RACK1; ribosome, transl 93.6 4.4 0.00015 41.0 19.7 136 472-626 93-243 (343)
276 3lrv_A PRE-mRNA-splicing facto 93.6 5.1 0.00017 40.5 20.2 150 555-726 138-299 (343)
277 1yiq_A Quinohemoprotein alcoho 93.6 3.7 0.00013 46.6 20.6 118 551-680 66-200 (689)
278 3m0c_C LDL receptor, low-densi 93.6 13 0.00044 42.7 27.1 213 477-722 404-633 (791)
279 3dr2_A Exported gluconolactona 93.5 1.8 6E-05 43.4 16.0 196 508-727 56-273 (305)
280 3k26_A Polycomb protein EED; W 93.4 4.2 0.00014 41.1 19.3 105 509-629 85-194 (366)
281 3hrp_A Uncharacterized protein 93.2 9.5 0.00032 39.9 22.9 193 508-727 141-360 (409)
282 3dm0_A Maltose-binding peripla 93.0 5.2 0.00018 45.3 20.8 187 508-724 441-635 (694)
283 3p5b_L Low density lipoprotein 93.0 10 0.00034 39.6 27.2 213 477-722 92-321 (400)
284 3i2n_A WD repeat-containing pr 93.0 1.2 4.1E-05 45.2 14.1 214 477-721 44-291 (357)
285 1kv9_A Type II quinohemoprotei 92.9 4.9 0.00017 45.3 20.1 117 551-679 62-194 (668)
286 3o4h_A Acylamino-acid-releasin 92.9 2 6.7E-05 47.6 16.7 221 477-727 90-320 (582)
287 3iz6_a 40S ribosomal protein R 92.8 3 0.0001 43.1 17.1 219 477-724 88-332 (380)
288 3hxj_A Pyrrolo-quinoline quino 92.7 1.3 4.5E-05 44.5 13.9 198 477-722 40-245 (330)
289 3mmy_A MRNA export factor; mRN 92.7 5.5 0.00019 40.2 18.9 184 509-722 54-248 (368)
290 1gen_A Gelatinase A; hydrolase 92.6 6.3 0.00022 37.1 17.3 144 503-676 35-204 (218)
291 2vdu_B TRNA (guanine-N(7)-)-me 92.3 13 0.00043 39.3 21.6 236 421-678 114-397 (450)
292 1w6s_A Methanol dehydrogenase 92.3 3.9 0.00013 45.4 17.7 120 550-680 57-199 (599)
293 3gre_A Serine/threonine-protei 92.2 5 0.00017 42.1 18.2 149 555-723 181-361 (437)
294 1su3_A Interstitial collagenas 92.1 2 6.9E-05 45.6 14.5 147 503-679 267-437 (450)
295 4a11_B DNA excision repair pro 92.1 1.1 3.8E-05 46.4 12.7 147 555-723 111-278 (408)
296 1npe_A Nidogen, entactin; glyc 92.1 9.1 0.00031 37.0 24.9 189 467-678 48-242 (267)
297 3iuj_A Prolyl endopeptidase; h 92.1 7.1 0.00024 44.2 20.3 208 508-727 139-365 (693)
298 1fs1_B SKP1, cyclin A/CDK2-ass 92.0 0.081 2.8E-06 46.5 3.0 39 236-274 88-126 (141)
299 1k32_A Tricorn protease; prote 91.7 15 0.0005 43.9 23.5 145 477-634 317-468 (1045)
300 2xyi_A Probable histone-bindin 91.7 0.95 3.2E-05 48.0 11.7 190 511-726 196-415 (430)
301 3f3f_A Nucleoporin SEH1; struc 91.4 12 0.00041 37.1 22.2 189 508-721 22-249 (351)
302 3c7x_A Matrix metalloproteinas 91.4 5.5 0.00019 36.8 15.1 144 504-676 11-177 (196)
303 3dm0_A Maltose-binding peripla 91.3 10 0.00035 42.8 20.6 188 464-677 439-635 (694)
304 3frx_A Guanine nucleotide-bind 91.2 13 0.00044 37.0 19.3 214 474-721 84-317 (319)
305 2cn3_A Xyloglucanase, beta-1,4 91.1 25 0.00085 40.0 29.8 246 487-747 11-313 (737)
306 2fp8_A Strictosidine synthase; 90.9 10 0.00035 37.9 18.2 192 466-675 91-314 (322)
307 1n7d_A LDL receptor, low-densi 90.9 4.1 0.00014 46.3 16.4 218 477-724 386-617 (699)
308 4e54_B DNA damage-binding prot 90.8 1.3 4.4E-05 47.0 11.5 145 555-722 131-283 (435)
309 3oyo_A Hemopexin fold protein 90.8 11 0.00037 35.7 16.7 138 508-673 13-197 (225)
310 3ba0_A Macrophage metalloelast 90.7 5.7 0.00019 40.9 15.8 147 503-679 185-355 (365)
311 3oyo_A Hemopexin fold protein 90.7 9.7 0.00033 36.0 16.3 140 554-721 12-198 (225)
312 4h5i_A Guanine nucleotide-exch 90.5 16 0.00056 37.2 19.6 190 508-721 144-343 (365)
313 3frx_A Guanine nucleotide-bind 90.4 6.8 0.00023 39.2 16.2 142 555-723 76-229 (319)
314 2ymu_A WD-40 repeat protein; u 90.1 18 0.00062 39.3 20.9 199 477-707 366-571 (577)
315 1flg_A Protein (quinoprotein e 90.1 12 0.0004 41.4 18.9 116 551-679 64-200 (582)
316 2mad_H Methylamine dehydrogena 89.9 19 0.00066 36.9 27.1 70 649-724 278-353 (373)
317 1fwx_A Nitrous oxide reductase 89.8 3.8 0.00013 44.8 14.1 257 474-744 109-454 (595)
318 3o4h_A Acylamino-acid-releasin 89.8 5.1 0.00017 44.2 15.8 198 506-725 30-231 (582)
319 1su3_A Interstitial collagenas 89.7 12 0.00041 39.6 17.7 147 550-726 267-437 (450)
320 3c7x_A Matrix metalloproteinas 89.6 3.4 0.00012 38.3 11.9 144 550-723 10-177 (196)
321 3lrv_A PRE-mRNA-splicing facto 89.6 18 0.00063 36.2 19.6 176 508-703 138-330 (343)
322 2hz6_A Endoplasmic reticulum t 89.5 0.15 5.2E-06 53.1 2.8 182 505-726 6-199 (369)
323 2xzm_R RACK1; ribosome, transl 89.1 20 0.00068 36.0 20.4 140 555-719 87-242 (343)
324 3ba0_A Macrophage metalloelast 89.1 11 0.00037 38.8 16.4 147 550-726 185-355 (365)
325 2xe4_A Oligopeptidase B; hydro 89.0 22 0.00076 40.5 20.9 234 477-728 201-465 (751)
326 3c75_H MADH, methylamine dehyd 89.0 13 0.00043 39.2 17.2 100 477-583 99-212 (426)
327 2p9w_A MAL S 1 allergenic prot 88.0 23 0.0008 35.5 20.9 213 476-705 34-304 (334)
328 2xyi_A Probable histone-bindin 88.0 3.3 0.00011 43.7 12.2 143 558-721 196-353 (430)
329 3v65_B Low-density lipoprotein 86.4 32 0.0011 35.4 24.7 211 439-674 97-318 (386)
330 1sqj_A OXG-RCBH, oligoxylogluc 86.3 52 0.0018 37.7 29.0 228 487-732 4-280 (789)
331 1gen_A Gelatinase A; hydrolase 86.0 23 0.00077 33.3 18.4 145 550-723 35-204 (218)
332 3gre_A Serine/threonine-protei 86.0 35 0.0012 35.4 20.8 149 508-676 181-361 (437)
333 3sjl_D Methylamine dehydrogena 85.8 35 0.0012 35.2 24.1 278 421-726 44-368 (386)
334 1ijq_A LDL receptor, low-densi 85.6 31 0.001 34.4 25.5 184 467-676 42-240 (316)
335 1nr0_A Actin interacting prote 85.6 47 0.0016 36.5 23.5 180 477-680 170-361 (611)
336 1xfd_A DIP, dipeptidyl aminope 85.1 13 0.00044 42.1 15.9 58 477-540 91-150 (723)
337 3c75_H MADH, methylamine dehyd 84.4 35 0.0012 35.8 17.5 245 421-678 84-406 (426)
338 2mad_H Methylamine dehydrogena 84.4 39 0.0013 34.6 23.1 114 509-631 33-160 (373)
339 4a0p_A LRP6, LRP-6, low-densit 84.2 56 0.0019 36.2 27.2 212 477-722 15-238 (628)
340 3drz_A BTB/POZ domain-containi 84.2 0.81 2.8E-05 37.8 3.8 48 219-266 57-105 (107)
341 3lp9_A LS-24; SEED albumin, pl 83.6 5.5 0.00019 37.8 9.9 101 554-675 71-202 (227)
342 2hz6_A Endoplasmic reticulum t 83.5 0.39 1.3E-05 49.9 1.9 142 552-726 6-156 (369)
343 1hxn_A Hemopexin, HPX; heme, b 83.4 17 0.00059 34.1 13.1 136 507-674 27-197 (219)
344 1hxn_A Hemopexin, HPX; heme, b 83.2 30 0.001 32.4 15.9 136 554-721 27-197 (219)
345 2cn3_A Xyloglucanase, beta-1,4 82.6 71 0.0024 36.2 28.6 241 477-727 45-343 (737)
346 1z68_A Fibroblast activation p 82.3 56 0.0019 36.7 19.8 278 438-724 90-446 (719)
347 1n7d_A LDL receptor, low-densi 81.9 25 0.00087 39.7 16.3 187 466-678 417-618 (699)
348 2oiz_A Aromatic amine dehydrog 81.3 30 0.001 35.1 15.5 116 509-631 16-144 (361)
349 3ju4_A Endo-N-acetylneuraminid 80.9 52 0.0018 33.5 20.2 128 484-611 267-406 (670)
350 4h5i_A Guanine nucleotide-exch 80.9 51 0.0017 33.4 27.6 152 555-723 144-302 (365)
351 3lp9_A LS-24; SEED albumin, pl 80.6 21 0.00073 33.7 12.8 140 555-722 15-202 (227)
352 1xfd_A DIP, dipeptidyl aminope 80.1 18 0.00062 40.8 14.6 166 508-680 71-295 (723)
353 1sqj_A OXG-RCBH, oligoxylogluc 79.9 90 0.0031 35.7 29.3 240 478-728 38-340 (789)
354 3dw8_B Serine/threonine-protei 79.7 60 0.002 33.5 19.3 151 508-680 188-379 (447)
355 2ymu_A WD-40 repeat protein; u 79.7 71 0.0024 34.4 23.1 209 477-722 325-540 (577)
356 3v64_C Agrin; beta propeller, 79.7 55 0.0019 33.0 26.5 208 440-674 55-275 (349)
357 3sov_A LRP-6, low-density lipo 79.2 54 0.0018 32.7 25.6 213 477-723 13-240 (318)
358 3dw8_B Serine/threonine-protei 79.0 32 0.0011 35.7 15.2 149 555-725 188-377 (447)
359 3sjl_D Methylamine dehydrogena 78.7 63 0.0022 33.2 17.5 100 477-583 59-172 (386)
360 2p9w_A MAL S 1 allergenic prot 78.7 37 0.0013 34.1 14.2 167 476-658 99-304 (334)
361 1z68_A Fibroblast activation p 77.6 64 0.0022 36.2 18.2 116 602-722 263-394 (719)
362 1nr0_A Actin interacting prote 76.5 94 0.0032 34.0 27.6 188 510-726 161-360 (611)
363 1jof_A Carboxy-CIS,CIS-muconat 75.6 71 0.0024 32.2 23.9 205 524-741 119-363 (365)
364 3vu4_A KMHSV2; beta-propeller 75.6 70 0.0024 32.1 24.7 62 602-675 206-272 (355)
365 3vu4_A KMHSV2; beta-propeller 73.9 77 0.0026 31.8 20.3 64 649-722 206-272 (355)
366 3p5b_L Low density lipoprotein 72.5 92 0.0032 32.1 24.7 213 439-675 93-321 (400)
367 1ck7_A Protein (gelatinase A); 72.1 18 0.00062 39.9 10.9 143 503-676 448-617 (631)
368 2xe4_A Oligopeptidase B; hydro 71.5 1.2E+02 0.004 34.5 18.2 184 524-719 201-398 (751)
369 4ajy_C Transcription elongatio 71.0 1.8 6.1E-05 34.9 2.0 36 218-253 50-96 (97)
370 3m0c_C LDL receptor, low-densi 70.7 1.5E+02 0.0051 33.8 26.2 145 507-674 481-632 (791)
371 1fwx_A Nitrous oxide reductase 68.1 81 0.0028 34.4 14.8 208 508-733 101-381 (595)
372 4hvt_A Ritya.17583.B, post-pro 67.8 1.6E+02 0.0055 33.0 24.1 244 473-730 152-438 (711)
373 2ece_A 462AA long hypothetical 66.4 1.3E+02 0.0045 31.5 20.3 163 468-634 97-296 (462)
374 2oit_A Nucleoporin 214KDA; NH2 65.3 1.3E+02 0.0044 31.3 15.8 60 556-627 162-223 (434)
375 3drx_A BTB/POZ domain-containi 65.3 4.1 0.00014 37.6 3.3 48 219-266 63-111 (202)
376 2oaj_A Protein SNI1; WD40 repe 64.7 2.1E+02 0.0071 33.2 25.3 177 477-679 39-247 (902)
377 2oaj_A Protein SNI1; WD40 repe 64.5 2.1E+02 0.0072 33.1 23.5 187 508-725 28-246 (902)
378 2qe8_A Uncharacterized protein 62.9 1.3E+02 0.0043 30.0 16.1 83 502-586 70-161 (343)
379 1ck7_A Protein (gelatinase A); 62.4 48 0.0016 36.5 11.7 145 550-723 448-617 (631)
380 3a0f_A Xyloglucanase; beta-pro 62.3 2.1E+02 0.0072 32.4 26.0 237 478-727 44-351 (763)
381 2ece_A 462AA long hypothetical 62.2 1.6E+02 0.0054 30.9 18.2 164 508-680 95-295 (462)
382 3tc9_A Hypothetical hydrolase; 62.1 1E+02 0.0035 32.2 14.1 143 508-673 149-300 (430)
383 2r9r_B Paddle chimera voltage 61.9 6.3 0.00021 42.7 4.6 43 154-196 98-142 (514)
384 3k6s_A Integrin alpha-X; cell 61.3 59 0.002 38.7 13.2 176 546-724 334-545 (1095)
385 3a0f_A Xyloglucanase; beta-pro 60.2 2.3E+02 0.0078 32.1 26.3 197 525-732 44-295 (763)
386 3tc9_A Hypothetical hydrolase; 54.8 96 0.0033 32.3 12.4 143 555-720 149-300 (430)
387 3sov_A LRP-6, low-density lipo 54.7 1.7E+02 0.0058 28.9 22.1 175 475-676 55-240 (318)
388 3v7d_A Suppressor of kinetocho 54.4 8.1 0.00028 34.7 3.3 33 237-269 101-133 (169)
389 1jof_A Carboxy-CIS,CIS-muconat 53.8 1.8E+02 0.0062 29.0 16.9 182 526-724 18-229 (365)
390 1mda_H Methylamine dehydrogena 49.4 1.7E+02 0.0057 29.8 12.8 84 649-740 275-363 (368)
391 3qhy_B Beta-lactamase inhibito 48.0 81 0.0028 30.7 9.8 130 500-657 72-205 (282)
392 2j04_A TAU60, YPL007P, hypothe 46.9 3.1E+02 0.011 29.7 16.9 145 555-724 96-257 (588)
393 3ju4_A Endo-N-acetylneuraminid 45.5 2.7E+02 0.0091 28.5 13.3 126 533-658 269-406 (670)
394 2qe8_A Uncharacterized protein 43.1 2.5E+02 0.0087 27.6 23.3 125 503-633 21-161 (343)
395 4hvt_A Ritya.17583.B, post-pro 41.2 3.7E+02 0.013 30.0 15.0 102 617-725 268-385 (711)
396 3k6s_A Integrin alpha-X; cell 41.1 1.5E+02 0.0053 35.2 12.3 147 594-742 335-509 (1095)
397 4a0p_A LRP6, LRP-6, low-densit 40.4 4E+02 0.014 29.2 22.8 172 524-722 15-198 (628)
398 3s94_A LRP-6, low-density lipo 39.3 4.2E+02 0.014 29.0 24.4 221 477-723 18-245 (619)
399 4hw6_A Hypothetical protein, I 39.1 3.5E+02 0.012 28.0 14.9 143 509-673 153-303 (433)
400 4hw6_A Hypothetical protein, I 37.9 3.6E+02 0.012 27.9 14.1 142 556-720 153-303 (433)
401 2j04_A TAU60, YPL007P, hypothe 36.6 4.4E+02 0.015 28.6 19.9 173 508-707 96-289 (588)
402 1s1g_A Potassium voltage-gated 32.6 16 0.00054 30.8 1.4 39 219-257 60-99 (124)
403 3qhy_B Beta-lactamase inhibito 31.2 80 0.0027 30.7 6.6 132 501-658 34-167 (282)
404 4d9s_A UVB-resistance protein 31.1 1.2E+02 0.004 31.3 8.3 18 500-517 130-148 (406)
405 1pd7_B MAD1; PAH2, SIN3, eukar 29.6 24 0.00082 20.1 1.3 14 177-190 3-16 (26)
406 4a5s_A Dipeptidyl peptidase 4 29.2 6.3E+02 0.021 28.0 18.5 147 572-723 229-402 (740)
407 3of7_A Regulator of chromosome 25.3 5E+02 0.017 27.1 12.2 18 640-657 321-339 (473)
408 2xzi_A KDNAse, extracellular s 24.0 4.1E+02 0.014 26.9 10.9 142 549-702 189-352 (386)
409 2be1_A Serine/threonine-protei 22.9 3.6E+02 0.012 26.9 9.7 99 572-679 21-137 (339)
410 3ei3_A DNA damage-binding prot 22.8 1E+03 0.035 28.3 19.4 161 524-697 807-980 (1158)
411 1nn7_A Potassium channel KV4.2 22.0 20 0.00069 29.1 0.2 39 219-257 47-86 (105)
412 4a5s_A Dipeptidyl peptidase 4 21.4 8.5E+02 0.029 26.9 21.5 192 525-723 229-451 (740)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.6e-50 Score=422.19 Aligned_cols=293 Identities=39% Similarity=0.680 Sum_probs=265.1
Q ss_pred ccCCCccCCcCcEEEEEcCccCCCCCCcceEeecCCCCceeecccccccceEEecccccccCCCccceEEEEeCCCCceE
Q psy10286 411 KTTPRRCNYVMGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQ 490 (748)
Q Consensus 411 ~~~~r~~~~~~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~ 490 (748)
++.||....+++.||++||.+. ...+++++||+.+++|.
T Consensus 5 ~~~~r~~~~~~~~i~v~GG~~~-----------------------------------------~~~~~~~~~d~~~~~W~ 43 (302)
T 2xn4_A 5 RTRLRTPMNLPKLMVVVGGQAP-----------------------------------------KAIRSVECYDFKEERWH 43 (302)
T ss_dssp ----------CEEEEEECCBSS-----------------------------------------SBCCCEEEEETTTTEEE
T ss_pred cccCCcccCCCCEEEEECCCCC-----------------------------------------CCCCcEEEEcCcCCcEe
Confidence 4567777678899999999743 33467999999999999
Q ss_pred EccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCC
Q psy10286 491 MAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSL 570 (748)
Q Consensus 491 ~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~ 570 (748)
.++++|.+|.+|++++++++||++||.++....+++++||+.+++|+.++++|.+|..|++++++++||++||.++...+
T Consensus 44 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 123 (302)
T 2xn4_A 44 QVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGL 123 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEE
T ss_pred EcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccC
Confidence 99999999999999999999999999987777899999999999999999999999999999999999999998877778
Q ss_pred ceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCc--ccCeEEEEECCCCcEEEccCCCCCCcceeEEEE
Q psy10286 571 NTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLS--IFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL 648 (748)
Q Consensus 571 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 648 (748)
+++++||+.+++|+.++++|.+|..|++++++++||++||.++.. ..+++++||+.+++|+.++++|.+|..|+++++
T Consensus 124 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 203 (302)
T 2xn4_A 124 SSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL 203 (302)
T ss_dssp EEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE
Confidence 999999999999999999999999999999999999999986543 478999999999999999999999999999999
Q ss_pred CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceEecC
Q psy10286 649 NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFVA 728 (748)
Q Consensus 649 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (748)
+++||++||.++....+++++||+.+++|+.++.+|.+|.+|+++.++++|||+||.++....+++++||+++++|+.++
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 99999999998877789999999999999999999999999999999999999999987777889999999999999997
Q ss_pred -CCCCCCcceEEEEeec
Q psy10286 729 -PMCAHEGGVGVGVIPI 744 (748)
Q Consensus 729 -~~~~~r~~~~~~~~~~ 744 (748)
+||.+|++|+++++..
T Consensus 284 ~~~~~~r~~~~~~~~~~ 300 (302)
T 2xn4_A 284 SCMSTGRSYAGVTVIDK 300 (302)
T ss_dssp SCCSSCCBSCEEEEEEC
T ss_pred cccCcccccceEEEecc
Confidence 8999999999999853
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.8e-50 Score=421.31 Aligned_cols=269 Identities=37% Similarity=0.722 Sum_probs=255.2
Q ss_pred CccceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccC----CCCCCCCeEEEEECCCCeEEEccCCCCCccee
Q psy10286 474 DSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGY----NGSERLSTVEEFDPVRRVWNKVSPMCFKRSAV 549 (748)
Q Consensus 474 ~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~----~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~ 549 (748)
...++++.||+.+++|..++++|.+|.+|++++++++||++||. .+....+++++||+.+++|+.++++|.+|..|
T Consensus 36 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 115 (308)
T 1zgk_A 36 QSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI 115 (308)
T ss_dssp SBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC
T ss_pred CCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc
Confidence 45578999999999999999999999999999999999999998 55556789999999999999999999999999
Q ss_pred EEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCc
Q psy10286 550 GAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDE 629 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 629 (748)
++++++++||++||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++
T Consensus 116 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 116 GVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp EEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred EEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 99999999999999887667899999999999999999999999999999999999999999877778999999999999
Q ss_pred EEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCC
Q psy10286 630 WTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVS 709 (748)
Q Consensus 630 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 709 (748)
|+.++++|.+|..|++++++++|||+||.++....+++++||+.+++|+.++++|.+|.+|+++.++++|||+||.++..
T Consensus 196 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 275 (308)
T 1zgk_A 196 WRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHT 275 (308)
T ss_dssp EEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC
T ss_pred EeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCc
Confidence 99999999999999999999999999999887778999999999999999999999999999999999999999998877
Q ss_pred CCCeEEEEeCCCCceEecCCCCCCCcceEEEEe
Q psy10286 710 NLPTVEVYDPSTDSWAFVAPMCAHEGGVGVGVI 742 (748)
Q Consensus 710 ~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 742 (748)
..+++++||+++++|+.+++||.+|++|++++|
T Consensus 276 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 276 FLDSVECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp BCCEEEEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred ccceEEEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 788999999999999999999999999999985
No 3
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.7e-50 Score=418.48 Aligned_cols=270 Identities=42% Similarity=0.785 Sum_probs=256.7
Q ss_pred CccceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCe---EEEccCCCCCcceeE
Q psy10286 474 DSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRV---WNKVSPMCFKRSAVG 550 (748)
Q Consensus 474 ~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~---W~~~~~~~~~r~~~~ 550 (748)
...++++.||+.+++|..++++|.+|.+|+++..+++||++||..+....+++++||+.+++ |+.++++|.+|..|+
T Consensus 28 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~ 107 (301)
T 2vpj_A 28 SPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAG 107 (301)
T ss_dssp EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCE
T ss_pred cceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCcccee
Confidence 45578999999999999999999999999999999999999999877778999999999999 999999999999999
Q ss_pred EEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcE
Q psy10286 551 AAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEW 630 (748)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 630 (748)
++.++++||++||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|
T Consensus 108 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 187 (301)
T 2vpj_A 108 ATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHW 187 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred EEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcE
Confidence 99999999999999877778999999999999999999999999999999999999999998777789999999999999
Q ss_pred EEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCC
Q psy10286 631 TSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSN 710 (748)
Q Consensus 631 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~ 710 (748)
+.++++|.+|..|+++.++++||++||.++....+++++||+.+++|+.++.+|.+|..|+++.++++|||+||.++...
T Consensus 188 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~ 267 (301)
T 2vpj_A 188 TNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSL 267 (301)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSB
T ss_pred EeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcc
Confidence 99999999999999999999999999998877789999999999999999999999999999999999999999987766
Q ss_pred CCeEEEEeCCCCceEecCCCCCCCcceEEEEee
Q psy10286 711 LPTVEVYDPSTDSWAFVAPMCAHEGGVGVGVIP 743 (748)
Q Consensus 711 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 743 (748)
.+++++||+++++|+.+++||.+|++|++++++
T Consensus 268 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 268 LSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred cccEEEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 789999999999999999999999999999884
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.2e-49 Score=416.32 Aligned_cols=268 Identities=26% Similarity=0.466 Sum_probs=253.6
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEEC
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALN 555 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~ 555 (748)
.++++.||+.+++|..++++|.+|.+|++++++++||++||.+ ....+++++||+.+++|+.++++|.+|.+|++++++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 101 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAE 101 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEET
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCCCccccceeEEEEC
Confidence 3679999999999999999999999999999999999999987 667899999999999999999999999999999999
Q ss_pred CEEEEEeCCC-CCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcc----cCeEEEEECCCCcE
Q psy10286 556 DKLYVCGGYD-GVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSI----FDSVERYDPKTDEW 630 (748)
Q Consensus 556 ~~iyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~~~~yd~~~~~W 630 (748)
++||++||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++||.++... .+++++||+.+++|
T Consensus 102 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 102 GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW 181 (306)
T ss_dssp TEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEE
T ss_pred CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeE
Confidence 9999999987 566789999999999999999999999999999999999999999866554 78999999999999
Q ss_pred EEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCC
Q psy10286 631 TSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSN 710 (748)
Q Consensus 631 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~ 710 (748)
+.++++|.+|..|+++.++++||++||.++....+++++||+.+++|+.++++|.+|.+|+++.++++|||+||.++...
T Consensus 182 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~ 261 (306)
T 3ii7_A 182 TELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGR 261 (306)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSB
T ss_pred EECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCee
Confidence 99999999999999999999999999998877789999999999999999999999999999999999999999988778
Q ss_pred CCeEEEEeCCCCceEecCCCCCCCcceEEEEeec
Q psy10286 711 LPTVEVYDPSTDSWAFVAPMCAHEGGVGVGVIPI 744 (748)
Q Consensus 711 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 744 (748)
.+++++||+++++|+.+++||.+|.+|+++++.-
T Consensus 262 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 262 LGHILEYNTETDKWVANSKVRAFPVTSCLICVVD 295 (306)
T ss_dssp CCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEE
T ss_pred eeeEEEEcCCCCeEEeCCCcccccceeEEEEECC
Confidence 8899999999999999999999999999888743
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=8.9e-46 Score=389.14 Aligned_cols=283 Identities=27% Similarity=0.505 Sum_probs=251.3
Q ss_pred cCCCccCCcCcEEEEEcCccCCCCCCcceEeecCCCCceeecccccccceEEecccccccCCCccceEEEEeCCCCceEE
Q psy10286 412 TTPRRCNYVMGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQM 491 (748)
Q Consensus 412 ~~~r~~~~~~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~ 491 (748)
.+||.++...+.||++||. ++++||+.+++|..
T Consensus 6 ~~~r~~~~~~~~i~~~GG~-----------------------------------------------~~~~yd~~~~~W~~ 38 (318)
T 2woz_A 6 DIPRHGMFVKDLILLVNDT-----------------------------------------------AAVAYDPMENECYL 38 (318)
T ss_dssp SSCCCCCSEEEEEEEECSS-----------------------------------------------EEEEEETTTTEEEE
T ss_pred ccccccceecchhhhcccc-----------------------------------------------ceEEECCCCCceec
Confidence 4678877788899999994 26889999999987
Q ss_pred cc-CCCcccceeEEEEECCEEEEEccCC--CC----CCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCC
Q psy10286 492 AE-AMSMLRSRVGVAVMKNRLYAFGGYN--GS----ERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGY 564 (748)
Q Consensus 492 ~~-~~~~~r~~~~~~~~~~~iyv~GG~~--~~----~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~ 564 (748)
.+ +.+.+|.+|+++..+++||++||.. .. ...+.+++||+.+++|+.++++|.+|..|++++++++||++||.
T Consensus 39 ~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 118 (318)
T 2woz_A 39 TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGK 118 (318)
T ss_dssp EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEE
T ss_pred ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCc
Confidence 43 2247899999999999999999963 11 12345999999999999999999999999999999999999998
Q ss_pred C--CCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCC-CCcccCeEEEEECCCCcEEEccCCCCCCc
Q psy10286 565 D--GVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHD-GLSIFDSVERYDPKTDEWTSVKPMLTKRC 641 (748)
Q Consensus 565 ~--~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 641 (748)
+ +...++++++||+.+++|+.++++|.+|.+|++++++++||++||.+ +....+++++||+.+++|+.++++|.+|.
T Consensus 119 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 198 (318)
T 2woz_A 119 DLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRS 198 (318)
T ss_dssp BTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCB
T ss_pred cCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcc
Confidence 6 45567999999999999999999999999999999999999999984 34567899999999999999999999999
Q ss_pred ceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCC---------CCCC
Q psy10286 642 RLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGV---------SNLP 712 (748)
Q Consensus 642 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~---------~~~~ 712 (748)
.|++++++++|||+||.++....+++++||+.+++|+.++++|.+|.+|+++.++++|||+||.+.. ...+
T Consensus 199 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~ 278 (318)
T 2woz_A 199 MFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVN 278 (318)
T ss_dssp SCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCC
T ss_pred cceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceee
Confidence 9999999999999999988777899999999999999999999999999999999999999998752 2467
Q ss_pred eEEEEeCCCCceEecCCCCCCCcceEEEEee
Q psy10286 713 TVEVYDPSTDSWAFVAPMCAHEGGVGVGVIP 743 (748)
Q Consensus 713 ~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 743 (748)
++++||+++++|+.+ +|.+|++|+++++.
T Consensus 279 ~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~ 307 (318)
T 2woz_A 279 DIWKYEDDKKEWAGM--LKEIRYASGASCLA 307 (318)
T ss_dssp CEEEEETTTTEEEEE--ESCCGGGTTCEEEE
T ss_pred eEEEEeCCCCEehhh--cccccccccceeeC
Confidence 899999999999999 88999999988763
No 6
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.5e-45 Score=386.84 Aligned_cols=263 Identities=23% Similarity=0.455 Sum_probs=236.4
Q ss_pred eEEEEeCCCCceEEccCC--CcccceeEEEEECCEEEEEccCC----C--CCCCCeEEEEECCCCeEEEccCCCCCccee
Q psy10286 478 TVEVFDPLVGRWQMAEAM--SMLRSRVGVAVMKNRLYAFGGYN----G--SERLSTVEEFDPVRRVWNKVSPMCFKRSAV 549 (748)
Q Consensus 478 ~~~~yd~~~~~W~~~~~~--~~~r~~~~~~~~~~~iyv~GG~~----~--~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~ 549 (748)
+++.||+.+++|.. +++ |.+|.+|++++++++||++||.. + ....+++++||+.+++|+.++++|.+|.+|
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 92 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLF 92 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESC
T ss_pred ceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhce
Confidence 57899999999987 656 45899999999999999999962 1 223456999999999999999999999999
Q ss_pred EEEEECCEEEEEeCCC---CCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccC-CCCcccCeEEEEEC
Q psy10286 550 GAAALNDKLYVCGGYD---GVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGH-DGLSIFDSVERYDP 625 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~---~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~yd~ 625 (748)
++++++++||++||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++||. ++....+++++||+
T Consensus 93 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 172 (315)
T 4asc_A 93 GLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDP 172 (315)
T ss_dssp EEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred eEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeC
Confidence 9999999999999964 3567899999999999999999999999999999999999999998 55567899999999
Q ss_pred CCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCC
Q psy10286 626 KTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGY 705 (748)
Q Consensus 626 ~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 705 (748)
.+++|+.++++|.+|..|++++++++|||+||.++....+++++||+.+++|+.++++|.+|.+|+++.++++|||+||.
T Consensus 173 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 252 (315)
T 4asc_A 173 KKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGGF 252 (315)
T ss_dssp TTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEE
T ss_pred CCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECCEEEEECCc
Confidence 99999999999999999999999999999999988878899999999999999999999999999999999999999998
Q ss_pred CCC---------CCCCeEEEEeCCCCceEecCCCCCCCcceEEEEee
Q psy10286 706 DGV---------SNLPTVEVYDPSTDSWAFVAPMCAHEGGVGVGVIP 743 (748)
Q Consensus 706 ~~~---------~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 743 (748)
++. ...+++++||+++++|+.+ ++.+|..|+++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~ 297 (315)
T 4asc_A 253 ATLETESGELVPTELNDIWRYNEEEKKWEGV--LREIAYAAGATFLP 297 (315)
T ss_dssp EEEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCSSCCSSCEEEE
T ss_pred cccCcCCccccccccCcEEEecCCCChhhhh--ccCCcCccceEEeC
Confidence 531 2356899999999999999 56678888877763
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=8.8e-42 Score=364.98 Aligned_cols=255 Identities=16% Similarity=0.202 Sum_probs=215.3
Q ss_pred eEEEEeCC--CCceEEccCCC-cccceeEEEEECCEEEEEccC-C----CCCCCCeEEEEECCCCeEEEccCCC-CCcce
Q psy10286 478 TVEVFDPL--VGRWQMAEAMS-MLRSRVGVAVMKNRLYAFGGY-N----GSERLSTVEEFDPVRRVWNKVSPMC-FKRSA 548 (748)
Q Consensus 478 ~~~~yd~~--~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~-~----~~~~~~~v~~yd~~t~~W~~~~~~~-~~r~~ 548 (748)
++++||+. +++|+.++++| .+|.+|++++++++|||+||. . ....++++|+||+.+++|+.+++++ .+|.+
T Consensus 32 ~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~ 111 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAG 111 (357)
T ss_dssp CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSS
T ss_pred eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCccccc
Confidence 68999998 48999999999 899999999999999999998 2 2345789999999999999999998 99999
Q ss_pred eEEEEECCEEEEEeCCCCC----------------------------------CCCceEEEEeCCCCeEEEccCCCCCCc
Q psy10286 549 VGAAALNDKLYVCGGYDGV----------------------------------SSLNTVECYEPDKDQWRIVKSMQKHRS 594 (748)
Q Consensus 549 ~~~~~~~~~iyv~GG~~~~----------------------------------~~~~~~~~yd~~~~~W~~~~~~~~~r~ 594 (748)
|++++++++||++||.++. ..++++++||+.+++|+.++++|.+|.
T Consensus 112 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~ 191 (357)
T 2uvk_A 112 HVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT 191 (357)
T ss_dssp EEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC
T ss_pred ceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCc
Confidence 9999999999999998643 256899999999999999999998755
Q ss_pred c-eEEEEECCEEEEEccCCCC-cccCeEEEEEC--CCCcEEEccCCCCC--CcceeEEEECCEEEEEeccCCC-------
Q psy10286 595 A-GGVIAFDSYVYALGGHDGL-SIFDSVERYDP--KTDEWTSVKPMLTK--RCRLGVAALNNKIYVCGGYDGA------- 661 (748)
Q Consensus 595 ~-~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~--~~~~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~~~~------- 661 (748)
. |++++++++||++||.++. ...+++++||+ .+++|+.++++|.+ |..|++++++++|||+||.+..
T Consensus 192 ~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 271 (357)
T 2uvk_A 192 AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQ 271 (357)
T ss_dssp BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHH
T ss_pred ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCccccc
Confidence 5 9999999999999998543 34678999986 99999999988766 4577799999999999996432
Q ss_pred ----------ccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCC-CCeEEEEeCCCCceEecCCC
Q psy10286 662 ----------IFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSN-LPTVEVYDPSTDSWAFVAPM 730 (748)
Q Consensus 662 ----------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~-~~~v~~yd~~~~~W~~~~~~ 730 (748)
..++++++||+.+++|+.++.+|.+|.+|+++.++++|||+||.+.+.. .+++++|+.++++|....+.
T Consensus 272 ~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 272 NGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp TTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred ccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 2346899999999999999999999999999999999999999886543 58999999999999999887
Q ss_pred CC
Q psy10286 731 CA 732 (748)
Q Consensus 731 ~~ 732 (748)
|+
T Consensus 352 ~~ 353 (357)
T 2uvk_A 352 HH 353 (357)
T ss_dssp --
T ss_pred cc
Confidence 75
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1e-41 Score=356.30 Aligned_cols=248 Identities=36% Similarity=0.689 Sum_probs=224.3
Q ss_pred CCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCC----CCCCC
Q psy10286 494 AMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGY----DGVSS 569 (748)
Q Consensus 494 ~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~----~~~~~ 569 (748)
+-+.+|..|+++.++++||++||. .....+++++||+.+++|+.++++|.+|.+|++++++++||++||. ++...
T Consensus 10 ~~~~~~~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 88 (308)
T 1zgk_A 10 SSGLVPRGSHAPKVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTD 88 (308)
T ss_dssp -----------CCCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEE
T ss_pred cCCeeeCCccccCCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCee
Confidence 346778999999999999999998 4557789999999999999999999999999999999999999998 55556
Q ss_pred CceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEEC
Q psy10286 570 LNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALN 649 (748)
Q Consensus 570 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 649 (748)
++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+|..|++++++
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 168 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN 168 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred cceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEEC
Confidence 88999999999999999999999999999999999999999877777889999999999999999999999999999999
Q ss_pred CEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceEecCC
Q psy10286 650 NKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFVAP 729 (748)
Q Consensus 650 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 729 (748)
++||++||.++....+++++||+.+++|+.++++|.+|.+|+++.++++|||+||.++....+++++||+++++|+.+++
T Consensus 169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 248 (308)
T 1zgk_A 169 RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP 248 (308)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC
T ss_pred CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCC
Confidence 99999999988777899999999999999999999999999999999999999999877778899999999999999999
Q ss_pred CCCCCcceEEEEe
Q psy10286 730 MCAHEGGVGVGVI 742 (748)
Q Consensus 730 ~~~~r~~~~~~~~ 742 (748)
+|.+|.+|+++++
T Consensus 249 ~p~~r~~~~~~~~ 261 (308)
T 1zgk_A 249 MKHRRSALGITVH 261 (308)
T ss_dssp CSSCCBSCEEEEE
T ss_pred CCCCccceEEEEE
Confidence 9999999998876
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=351.69 Aligned_cols=261 Identities=37% Similarity=0.661 Sum_probs=233.8
Q ss_pred ceEeecCCCCceeecccccc---cceEEecccccccCC-----CccceEEEEeCCCCceEEccCCCcccceeEEEEECCE
Q psy10286 439 TVEVFDPLVGRWQMAEEETL---SNAVISTKSCLTKAG-----DSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNR 510 (748)
Q Consensus 439 ~~~~y~~~~~~W~~~~~~~~---~~~~~~~~~~~~~~g-----~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~ 510 (748)
++++||+.+++|..++..+. .++++..++.++..| ...+++++||+.+++|+.++++|.+|.+|++++++++
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ 110 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGL 110 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTE
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCE
Confidence 37899999999998865332 334444455555444 2457899999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCC--CCceEEEEeCCCCeEEEccC
Q psy10286 511 LYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVS--SLNTVECYEPDKDQWRIVKS 588 (748)
Q Consensus 511 iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~yd~~~~~W~~~~~ 588 (748)
||++||.++....+++++||+.+++|+.++++|.+|..|++++++++||++||.++.. .++++++||+.+++|+.+++
T Consensus 111 iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~ 190 (302)
T 2xn4_A 111 LYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAE 190 (302)
T ss_dssp EEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECC
T ss_pred EEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCC
Confidence 9999999877778899999999999999999999999999999999999999987543 47899999999999999999
Q ss_pred CCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEE
Q psy10286 589 MQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVE 668 (748)
Q Consensus 589 ~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~ 668 (748)
+|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+|..|+++.++++||++||.++....++++
T Consensus 191 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~ 270 (302)
T 2xn4_A 191 MSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVE 270 (302)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEE
T ss_pred CccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEE
Confidence 99999999999999999999999877778899999999999999999999999999999999999999998877789999
Q ss_pred EEeCCCCcEEEcc-CCCCCCcceEEEEECCEE
Q psy10286 669 MYDPITDEWKMIA-SMNVMRSRVALVANMGKL 699 (748)
Q Consensus 669 ~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~l 699 (748)
+||+++++|+.++ .+|.+|..|++++++++|
T Consensus 271 ~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 271 YYNPTTDKWTVVSSCMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp EEETTTTEEEECSSCCSSCCBSCEEEEEEC--
T ss_pred EEcCCCCeEEECCcccCcccccceEEEecccC
Confidence 9999999999997 899999999999998875
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=356.80 Aligned_cols=227 Identities=21% Similarity=0.364 Sum_probs=211.0
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCC---CCCCCCeEEEEECCCCeEEEccCCCCCcceeEEE
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYN---GSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAA 552 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 552 (748)
.++++.||+.+++|+.++++|.+|.+|++++++++|||+||.+ +....+++++||+.+++|+.++++|.+|.+|+++
T Consensus 66 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 145 (315)
T 4asc_A 66 SAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL 145 (315)
T ss_dssp EEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred ccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE
Confidence 4569999999999999999999999999999999999999974 3567889999999999999999999999999999
Q ss_pred EECCEEEEEeCC-CCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 553 ALNDKLYVCGGY-DGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 553 ~~~~~iyv~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
+++++||++||. .+...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+
T Consensus 146 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 146 SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp EETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred EECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 999999999998 4566789999999999999999999999999999999999999999987777889999999999999
Q ss_pred EccCCCCCCcceeEEEECCEEEEEeccCCC---------ccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEE
Q psy10286 632 SVKPMLTKRCRLGVAALNNKIYVCGGYDGA---------IFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAI 702 (748)
Q Consensus 632 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~---------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~ 702 (748)
.++++|.+|..|+++.++++|||+||.++. ...+++++||+++++|+.+ ++.+|.+|++++++++||++
T Consensus 226 ~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~l~v~ 303 (315)
T 4asc_A 226 PFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV--LREIAYAAGATFLPVRLNVL 303 (315)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCSSCCSSCEEEEEEECGG
T ss_pred ECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh--ccCCcCccceEEeCCEEEEE
Confidence 999999999999999999999999998531 3568999999999999999 67789999999999999999
Q ss_pred eC
Q psy10286 703 GG 704 (748)
Q Consensus 703 GG 704 (748)
+.
T Consensus 304 ~~ 305 (315)
T 4asc_A 304 RL 305 (315)
T ss_dssp GS
T ss_pred Ee
Confidence 65
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=8.6e-41 Score=349.21 Aligned_cols=280 Identities=25% Similarity=0.437 Sum_probs=246.3
Q ss_pred cCCCccCCcCcEEEEEcCccCCCCCCcceEeecCCCCceeecccccc---cceEEecccccccCC----CccceEEEEeC
Q psy10286 412 TTPRRCNYVMGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEETL---SNAVISTKSCLTKAG----DSLSTVEVFDP 484 (748)
Q Consensus 412 ~~~r~~~~~~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~~---~~~~~~~~~~~~~~g----~~~~~~~~yd~ 484 (748)
.+||.+ ..+.||++||... .+++++||+.+++|..+++.+. .++++..++.++..| ...++++.||+
T Consensus 4 ~~pr~~--~~~~l~~~GG~~~----~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~ 77 (306)
T 3ii7_A 4 TRPRRK--KHDYRIALFGGSQ----PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNV 77 (306)
T ss_dssp --------CCCEEEEEECCSS----TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEET
T ss_pred ccCCcc--ccceEEEEeCCCC----CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeC
Confidence 345543 3578999999754 6899999999999999876432 333444455555444 35689999999
Q ss_pred CCCceEEccCCCcccceeEEEEECCEEEEEccCC-CCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeC
Q psy10286 485 LVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYN-GSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGG 563 (748)
Q Consensus 485 ~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG 563 (748)
.+++|..++++|.+|.+|++++++++|||+||.+ +....+++++||+.+++|+.++++|.+|..|+++.++++||++||
T Consensus 78 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 157 (306)
T 3ii7_A 78 VKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGG 157 (306)
T ss_dssp TTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECC
Confidence 9999999999999999999999999999999987 566788999999999999999999999999999999999999999
Q ss_pred CCCCCC----CceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCC
Q psy10286 564 YDGVSS----LNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTK 639 (748)
Q Consensus 564 ~~~~~~----~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 639 (748)
.++... ++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+
T Consensus 158 ~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 237 (306)
T 3ii7_A 158 SLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK 237 (306)
T ss_dssp EESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC
T ss_pred CCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC
Confidence 876554 8999999999999999999999999999999999999999997777788999999999999999999999
Q ss_pred CcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECC
Q psy10286 640 RCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMG 697 (748)
Q Consensus 640 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 697 (748)
|..|++++++++|||+||.++....+++++||+++++|+.++++|.+|.+|+++.+.+
T Consensus 238 r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 238 GVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVVD 295 (306)
T ss_dssp BSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEE
T ss_pred ccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEEECC
Confidence 9999999999999999999888888999999999999999999999999998887643
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=343.51 Aligned_cols=284 Identities=32% Similarity=0.625 Sum_probs=250.2
Q ss_pred ccCCCccCCcCcEEEEEcCccCCCCCCcceEeecCCCCceeecccccc---cceEEecccccccCC-----CccceEEEE
Q psy10286 411 KTTPRRCNYVMGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEETL---SNAVISTKSCLTKAG-----DSLSTVEVF 482 (748)
Q Consensus 411 ~~~~r~~~~~~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~~---~~~~~~~~~~~~~~g-----~~~~~~~~y 482 (748)
+++||. ..++.||++||....+...+++++||+.+++|..++..+. ..+++..++.++..| ...+++++|
T Consensus 6 ~~~pr~--~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~ 83 (301)
T 2vpj_A 6 RTRARL--GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECL 83 (301)
T ss_dssp ---------CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEE
T ss_pred cccccc--cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEE
Confidence 455663 4789999999954555677899999999999999875332 233444445554443 345789999
Q ss_pred eCCCCc---eEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEE
Q psy10286 483 DPLVGR---WQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLY 559 (748)
Q Consensus 483 d~~~~~---W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy 559 (748)
|+.+++ |+.++++|.+|.+|++++++++||++||..+....+++++||+.+++|+.++++|.+|..|++++++++||
T Consensus 84 d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 163 (301)
T 2vpj_A 84 DYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIY 163 (301)
T ss_dssp ETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEE
T ss_pred ECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEE
Confidence 999999 99999999999999999999999999999877778999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCC
Q psy10286 560 VCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTK 639 (748)
Q Consensus 560 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 639 (748)
++||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred EECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence 99998877788999999999999999999999999999999999999999998777789999999999999999999999
Q ss_pred CcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEEC
Q psy10286 640 RCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANM 696 (748)
Q Consensus 640 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 696 (748)
|..|+++.++++||++||.++....+++++||+++++|+.++.+|.+|.+|+++.++
T Consensus 244 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 244 RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 999999999999999999988777899999999999999999999999999998874
No 13
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=9.6e-42 Score=349.14 Aligned_cols=263 Identities=29% Similarity=0.519 Sum_probs=228.2
Q ss_pred cceecchhhHhhHHHHHHHHHhcCCcccEEEEEC---CeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchhee
Q psy10286 49 CLVFQQLDLFSQGFPVMEEIRRQGKLCDVTIKVD---DQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVI 125 (748)
Q Consensus 49 ~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~---~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~ 125 (748)
...+.++.|.+.+++.|+++++++.+|||+|.++ |++|+|||+||+++|+||++||.++++|+....|.+++..
T Consensus 7 ~~~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~--- 83 (279)
T 3i3n_A 7 AEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWS--- 83 (279)
T ss_dssp EEEEECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCS---
T ss_pred ccCcCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEecccc---
Confidence 4568888999999999999999999999999998 9999999999999999999999999888877766662100
Q ss_pred hhhccccccccccccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhc
Q psy10286 126 VLAATIPYFQAMFTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKR 205 (748)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~ 205 (748)
..+++++++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||.+.
T Consensus 84 -------------------------~~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~ 138 (279)
T 3i3n_A 84 -------------------------SEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKK 138 (279)
T ss_dssp -------------------------STTCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -------------------------ccCCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHc
Confidence 0028999999999999999999999999999999999999988888888887776
Q ss_pred ccCCcccchhhhhhhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCCCCCcchHHHHHhhcC
Q psy10286 206 FHPNNVLDYYVLFSCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNVLGIRQFADTLN 285 (748)
Q Consensus 206 l~~~ncl~i~~~~~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~~~n~~~i~~~a~~~~ 285 (748)
++++|| +.++.+|+.++
T Consensus 139 l~~~n~---------------------------------------------------------------~~i~~~A~~~~ 155 (279)
T 3i3n_A 139 LHLSNC---------------------------------------------------------------VAIHSLAHMYT 155 (279)
T ss_dssp CCTTTH---------------------------------------------------------------HHHHHHHHHTT
T ss_pred CCcchH---------------------------------------------------------------HHHHHHHHHcC
Confidence 555444 45556677788
Q ss_pred chHHHHHHHHHHHHhhhhhccCcccccCCHHhHhcccccCCcCCCChHHHHHHHHHHHhcCccCCCCCHHHHHhhccCCC
Q psy10286 286 CLQLSEAADKYVQQYFHEVSMSDEFIGLGVNEVNDIVKRSELHLMSEEQVFEAVMRWVKHNASERAPSLPRLLAAVRLPL 365 (748)
Q Consensus 286 ~~~l~~~~~~~i~~~~~~l~~~~~f~~L~~~~l~~il~~~~l~~~~E~~v~~~v~~W~~~~~~~r~~~~~~l~~~vR~~~ 365 (748)
+.+|.+.|.+||.+||.+++.+++|..|+.+.|..+++++.|.+.+|.+||+++++|++++.+.|.+++..++++|||++
T Consensus 156 ~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~~r~~~~~~ll~~VRf~l 235 (279)
T 3i3n_A 156 LSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQ 235 (279)
T ss_dssp CHHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHHHHTTTHHHHHTTSCGGG
T ss_pred cHHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHhhhccchhhccChhhhHHHHHHHhhccCcc
Q psy10286 366 LSPHYLADRVATEALIRSSHECRDLVDEARDFHLMPE 402 (748)
Q Consensus 366 l~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 402 (748)
|++.+|.+.+...+++..++.|.+++.+|.+||..+.
T Consensus 236 ~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~~~~ 272 (279)
T 3i3n_A 236 MKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRA 272 (279)
T ss_dssp SCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHhhccchhcCCHHHHHHHHHHHHhccCch
Confidence 9999999999999999999999999999999987653
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=7.5e-41 Score=351.57 Aligned_cols=226 Identities=22% Similarity=0.375 Sum_probs=209.7
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCC--CCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYN--GSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 554 (748)
++++.||+.+++|..++++|.+|.+|++++++++|||+||.. +....+++++||+.+++|+.++++|.+|.+|+++++
T Consensus 78 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 157 (318)
T 2woz_A 78 SYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH 157 (318)
T ss_dssp BEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE
T ss_pred ccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE
Confidence 469999999999999999999999999999999999999986 455678999999999999999999999999999999
Q ss_pred CCEEEEEeCCC-CCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEc
Q psy10286 555 NDKLYVCGGYD-GVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSV 633 (748)
Q Consensus 555 ~~~iyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 633 (748)
+++||++||.. +...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.+
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 237 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM 237 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEEC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEEC
Confidence 99999999975 44568999999999999999999999999999999999999999997777788999999999999999
Q ss_pred cCCCCCCcceeEEEECCEEEEEeccCCC---------ccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeC
Q psy10286 634 KPMLTKRCRLGVAALNNKIYVCGGYDGA---------IFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGG 704 (748)
Q Consensus 634 ~~~p~~r~~~~~~~~~~~i~v~GG~~~~---------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG 704 (748)
+++|.+|..|+++.++++||++||.+.. ...+++++||+++++|+.+ +|.+|.+|+++.++++|||+..
T Consensus 238 ~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 238 TEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCCGGGTTCEEEEEEEEGGGC
T ss_pred CCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccccccccceeeCCEEEEEEe
Confidence 9999999999999999999999998652 3478999999999999999 7889999999999999999853
No 15
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=2.4e-41 Score=341.86 Aligned_cols=248 Identities=22% Similarity=0.511 Sum_probs=196.9
Q ss_pred cceecchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhh
Q psy10286 49 CLVFQQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLA 128 (748)
Q Consensus 49 ~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 128 (748)
...+..+.|.+.++++++++++++.+|||+|.++|++|+|||+||+++|+||++||.+++.+.
T Consensus 6 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~----------------- 68 (256)
T 3hve_A 6 GSAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKD----------------- 68 (256)
T ss_dssp ----CCTTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC------------------------
T ss_pred CCccCChHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcc-----------------
Confidence 455677899999999999999999999999999999999999999999999999999877621
Q ss_pred ccccccccccccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhcccC
Q psy10286 129 ATIPYFQAMFTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHP 208 (748)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~l~~ 208 (748)
++...+|.++++++++|+.+|+|+|||++.++.+++.+++.+|++||++.|++.|++||.+.+++
T Consensus 69 ---------------e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~ 133 (256)
T 3hve_A 69 ---------------DGSTYKIELEGISVMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAA 133 (256)
T ss_dssp -------------------CEEECSSCCHHHHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCS
T ss_pred ---------------cCCCCeEEeCCCCHHHHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCH
Confidence 12223455599999999999999999999999999999999999998888888888777776555
Q ss_pred CcccchhhhhhhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCCCCCcchHHHHHhhcCchH
Q psy10286 209 NNVLDYYVLFSCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNVLGIRQFADTLNCLQ 288 (748)
Q Consensus 209 ~ncl~i~~~~~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~~~n~~~i~~~a~~~~~~~ 288 (748)
+|| +.++.+|+.+++.+
T Consensus 134 ~n~---------------------------------------------------------------~~i~~~A~~~~~~~ 150 (256)
T 3hve_A 134 ENC---------------------------------------------------------------IGIRDFALHYCLHH 150 (256)
T ss_dssp STT---------------------------------------------------------------HHHHHHHHHTTCHH
T ss_pred hhH---------------------------------------------------------------HHHHHHHHHcCcHH
Confidence 544 45566677788889
Q ss_pred HHHHHHHHHHHhhhhhccCcccccCCHHhHhcccccCCcCCCChHHHHHHHHHHHhcCccCCCCCHHHHHhhccCCCCCh
Q psy10286 289 LSEAADKYVQQYFHEVSMSDEFIGLGVNEVNDIVKRSELHLMSEEQVFEAVMRWVKHNASERAPSLPRLLAAVRLPLLSP 368 (748)
Q Consensus 289 l~~~~~~~i~~~~~~l~~~~~f~~L~~~~l~~il~~~~l~~~~E~~v~~~v~~W~~~~~~~r~~~~~~l~~~vR~~~l~~ 368 (748)
|.+.|.+||.+||.++..+.+|..|+.+.+..+++++.|.+.+|.+||+++++|++++.++|.+++..++++|||++|++
T Consensus 151 L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~R~~~~~~ll~~VRf~~l~~ 230 (256)
T 3hve_A 151 VHYLATEYLETHFRDVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEIRKVHMKDVMSALWVSGLDS 230 (256)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CCSTTTHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccchhhccC-hhhhHHH
Q psy10286 369 HYLADRVATEALIRSS-HECRDLV 391 (748)
Q Consensus 369 ~~l~~~~~~~~l~~~~-~~~~~~~ 391 (748)
.+|.+.+..++++... +.|++++
T Consensus 231 ~~l~~~v~~~~l~~~~~~~c~~ll 254 (256)
T 3hve_A 231 SYLREQMLNEPLVREIVKECSNIP 254 (256)
T ss_dssp -CHHHHHHTSTTHHHHHCC-----
T ss_pred HHHHHHHhcChHHHhhHHHHHHHh
Confidence 9999998888998877 6788765
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=7.3e-39 Score=342.35 Aligned_cols=248 Identities=15% Similarity=0.155 Sum_probs=212.7
Q ss_pred EccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECC--CCeEEEccCCC-CCcceeEEEEECCEEEEEeCC-C-
Q psy10286 491 MAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPV--RRVWNKVSPMC-FKRSAVGAAALNDKLYVCGGY-D- 565 (748)
Q Consensus 491 ~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~--t~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~-~- 565 (748)
.+++||.+|.+|++++++++|||+||..+ +++++||+. +++|+.+++|| .+|.+|++++++++||++||. .
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~ 77 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKN 77 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEEC
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCC
Confidence 46889999999999999999999999764 479999998 49999999999 899999999999999999998 2
Q ss_pred ---CCCCCceEEEEeCCCCeEEEccCCC-CCCcceEEEEECCEEEEEccCCCCc--------------------------
Q psy10286 566 ---GVSSLNTVECYEPDKDQWRIVKSMQ-KHRSAGGVIAFDSYVYALGGHDGLS-------------------------- 615 (748)
Q Consensus 566 ---~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~~~~~-------------------------- 615 (748)
....++++++||+.+++|+.+++++ .+|..|++++.+++||++||.++..
T Consensus 78 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (357)
T 2uvk_A 78 SEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYF 157 (357)
T ss_dssp TTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhc
Confidence 2345899999999999999999998 8999999999999999999986432
Q ss_pred --------ccCeEEEEECCCCcEEEccCCCCCCcc-eeEEEECCEEEEEeccCCC-ccccEEEEEeC--CCCcEEEccCC
Q psy10286 616 --------IFDSVERYDPKTDEWTSVKPMLTKRCR-LGVAALNNKIYVCGGYDGA-IFLQSVEMYDP--ITDEWKMIASM 683 (748)
Q Consensus 616 --------~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~-~~~~~v~~yd~--~~~~W~~~~~~ 683 (748)
.++++++||+.+++|+.++++|.+|.. |++++++++|||+||.++. ...+++++||+ .+++|+.++.+
T Consensus 158 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~ 237 (357)
T 2uvk_A 158 DKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV 237 (357)
T ss_dssp SSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCS
T ss_pred cccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCC
Confidence 458999999999999999999987655 9999999999999997654 35678999986 99999999988
Q ss_pred CCC--CcceEEEEECCEEEEEeCCCCC-----------------CCCCeEEEEeCCCCceEecCCCCCCCcceEEEEe
Q psy10286 684 NVM--RSRVALVANMGKLWAIGGYDGV-----------------SNLPTVEVYDPSTDSWAFVAPMCAHEGGVGVGVI 742 (748)
Q Consensus 684 p~~--r~~~~~~~~~~~l~v~GG~~~~-----------------~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 742 (748)
|.+ |.+|+++.++++|||+||.+.. ....++++||+++++|+.++++|.+|.+|+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 315 (357)
T 2uvk_A 238 SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW 315 (357)
T ss_dssp STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEE
T ss_pred CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEe
Confidence 766 4578899999999999996432 2235799999999999999999999999998875
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=6e-39 Score=369.99 Aligned_cols=243 Identities=17% Similarity=0.205 Sum_probs=206.9
Q ss_pred cceEEEEeCCCCceEEcc-C-----CCcccceeEEEEE--CCEEEEEccCCCCC-CCCeEEEEECCCCeEEEccCCCCCc
Q psy10286 476 LSTVEVFDPLVGRWQMAE-A-----MSMLRSRVGVAVM--KNRLYAFGGYNGSE-RLSTVEEFDPVRRVWNKVSPMCFKR 546 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~-~-----~~~~r~~~~~~~~--~~~iyv~GG~~~~~-~~~~v~~yd~~t~~W~~~~~~~~~r 546 (748)
.+++++||+.+++|..++ + +|.+|.+|+++++ +++|||+||.++.. .++++|+||+.+++|+.++++|.+|
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R 490 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR 490 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc
Confidence 467899999999999887 5 7899999999999 99999999987644 6889999999999999999999999
Q ss_pred ceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccC---CCCCCcceEEEEEC---CEEEEEccCCCC--ccc
Q psy10286 547 SAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKS---MQKHRSAGGVIAFD---SYVYALGGHDGL--SIF 617 (748)
Q Consensus 547 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~r~~~~~~~~~---~~iyv~GG~~~~--~~~ 617 (748)
.+|+++++ +++||++||.++.. ++++||+.+++|+.+++ +|.+|.+|++++++ ++||++||.+.. ..+
T Consensus 491 ~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~ 567 (695)
T 2zwa_A 491 FRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVS 567 (695)
T ss_dssp BSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBC
T ss_pred ccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeee
Confidence 99999997 99999999987654 89999999999999986 89999999988876 899999998433 567
Q ss_pred CeEEEEECCCCc------EEEccCC-CCCCcceeEEEEC-CEEEEEeccCCCc---cccEEEEEeCCCCcEEEccCC---
Q psy10286 618 DSVERYDPKTDE------WTSVKPM-LTKRCRLGVAALN-NKIYVCGGYDGAI---FLQSVEMYDPITDEWKMIASM--- 683 (748)
Q Consensus 618 ~~~~~yd~~~~~------W~~~~~~-p~~r~~~~~~~~~-~~i~v~GG~~~~~---~~~~v~~yd~~~~~W~~~~~~--- 683 (748)
+++++||+.+++ |+.+.++ +.+|.+|++++++ ++|||+||.++.. ..+++++||+.+++|+.+...
T Consensus 568 ~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~ 647 (695)
T 2zwa_A 568 DKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRI 647 (695)
T ss_dssp CEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHH
T ss_pred CcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeeccccc
Confidence 899999999999 9999876 5899999999999 9999999987553 578999999999999965311
Q ss_pred ----CCCCcceEEEEECC-EEEEEeCCCC----CCCCCeEEEEeCCC
Q psy10286 684 ----NVMRSRVALVANMG-KLWAIGGYDG----VSNLPTVEVYDPST 721 (748)
Q Consensus 684 ----p~~r~~~~~~~~~~-~l~v~GG~~~----~~~~~~v~~yd~~~ 721 (748)
+..+.+|+++.+++ +|||+||... ....+.+|.+|..+
T Consensus 648 ~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 648 WEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp HHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred cCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEc
Confidence 12466788888766 9999999532 22345778777654
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=3.4e-35 Score=338.69 Aligned_cols=249 Identities=14% Similarity=0.168 Sum_probs=216.4
Q ss_pred ceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEcc-C-----CCCCcceeEEEEE--CCEEE
Q psy10286 488 RWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVS-P-----MCFKRSAVGAAAL--NDKLY 559 (748)
Q Consensus 488 ~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~-~-----~~~~r~~~~~~~~--~~~iy 559 (748)
+|...+..|.+|.+++++ ++++|||+||.++ ...+++++||+.+++|+.++ + +|.+|.+|+++++ +++||
T Consensus 378 ~~~~~~~~p~rr~g~~~~-~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ly 455 (695)
T 2zwa_A 378 QLLECECPINRKFGDVDV-AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLL 455 (695)
T ss_dssp EEEECCCTTCCBSCEEEE-CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEE
T ss_pred eEeccCCCCCCceeEEEE-ECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEE
Confidence 455556667777766544 8999999999877 77899999999999999998 5 8999999999999 99999
Q ss_pred EEeCCCCCC-CCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccC--
Q psy10286 560 VCGGYDGVS-SLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKP-- 635 (748)
Q Consensus 560 v~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-- 635 (748)
++||.++.. .++++++||+.+++|+.++++|.+|.+|+++++ +++||++||.++.. ++++||+.+++|+.+++
T Consensus 456 v~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g 532 (695)
T 2zwa_A 456 LIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKD 532 (695)
T ss_dssp EECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSS
T ss_pred EEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCC
Confidence 999987644 689999999999999999999999999999996 99999999987654 89999999999999986
Q ss_pred -CCCCCcceeEEEEC---CEEEEEeccCCC--ccccEEEEEeCCCCc------EEEccCC-CCCCcceEEEEEC-CEEEE
Q psy10286 636 -MLTKRCRLGVAALN---NKIYVCGGYDGA--IFLQSVEMYDPITDE------WKMIASM-NVMRSRVALVANM-GKLWA 701 (748)
Q Consensus 636 -~p~~r~~~~~~~~~---~~i~v~GG~~~~--~~~~~v~~yd~~~~~------W~~~~~~-p~~r~~~~~~~~~-~~l~v 701 (748)
+|.+|.+|++++++ ++|||+||.+.. ...+++++||+.+++ |+.++.+ +.+|.+|+++.++ ++|||
T Consensus 533 ~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv 612 (695)
T 2zwa_A 533 EFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLI 612 (695)
T ss_dssp GGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEE
T ss_pred CCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEE
Confidence 89999999988887 899999998543 567999999999999 9999875 5899999999999 99999
Q ss_pred EeCCCCCC---CCCeEEEEeCCCCceEecCCCCC--------CCcceEEEEe
Q psy10286 702 IGGYDGVS---NLPTVEVYDPSTDSWAFVAPMCA--------HEGGVGVGVI 742 (748)
Q Consensus 702 ~GG~~~~~---~~~~v~~yd~~~~~W~~~~~~~~--------~r~~~~~~~~ 742 (748)
+||.+... ..+++++||+.+++|+.+ ++|. .+.+|+++++
T Consensus 613 ~GG~~~~~~~~~~~~v~~yd~~t~~W~~~-~~p~~~~~~~~p~~~gh~~~~~ 663 (695)
T 2zwa_A 613 VGGTSPSGLFDRTNSIISLDPLSETLTSI-PISRRIWEDHSLMLAGFSLVST 663 (695)
T ss_dssp ECCBCSSCCCCTTTSEEEEETTTTEEEEC-CCCHHHHHHSCCCCSSCEEECC
T ss_pred ECCccCCCCCCCCCeEEEEECCCCeEEEe-eccccccCCCCccceeeeEEEe
Confidence 99987553 578999999999999964 3432 3567887765
No 19
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.1e-35 Score=343.04 Aligned_cols=298 Identities=16% Similarity=0.226 Sum_probs=238.1
Q ss_pred eEeecCCCCceeecccccc-c-ceEEec-ccccccCCC-----------ccceEEEEeCCCCceEEccCCCcccceeE--
Q psy10286 440 VEVFDPLVGRWQMAEEETL-S-NAVIST-KSCLTKAGD-----------SLSTVEVFDPLVGRWQMAEAMSMLRSRVG-- 503 (748)
Q Consensus 440 ~~~y~~~~~~W~~~~~~~~-~-~~~~~~-~~~~~~~g~-----------~~~~~~~yd~~~~~W~~~~~~~~~r~~~~-- 503 (748)
++.|||.+++|..+.+.+. . .+++.. ++.++..|. ....+++||+.+++|+.++.+|.+|..++
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~ 247 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPG 247 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCE
T ss_pred cccCCCCCCeeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCcccc
Confidence 6789999999998776433 2 222232 555544431 23479999999999999999988876654
Q ss_pred EEE-ECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeC-CCCCCCCceEEEEeCCC
Q psy10286 504 VAV-MKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGG-YDGVSSLNTVECYEPDK 580 (748)
Q Consensus 504 ~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG-~~~~~~~~~~~~yd~~~ 580 (748)
+++ .+++||++||.... ++++||+.+++|+.+++||.+|.+|+++++ +|+||++|| .++...++++++||+.+
T Consensus 248 ~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 443 48999999997643 799999999999999999999999999999 999999999 45666789999999999
Q ss_pred CeEEEc-----cCCCCCCcceEEEEECCEEEEEccCCCCc----ccCeEEEEECCCCcEEEccC-CCC------CCccee
Q psy10286 581 DQWRIV-----KSMQKHRSAGGVIAFDSYVYALGGHDGLS----IFDSVERYDPKTDEWTSVKP-MLT------KRCRLG 644 (748)
Q Consensus 581 ~~W~~~-----~~~~~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~-~p~------~r~~~~ 644 (748)
++|+.+ .+++..|.. +++..++++|++||.++.. ..++++.||+.+++|..... .+. ++..++
T Consensus 324 ~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 324 KTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 402 (656)
T ss_dssp TEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred CcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence 999997 456666543 5666799999999986542 36789999999999875432 221 244455
Q ss_pred EEE---ECCEEEEEeccCC---Ccccc---EEEEEeCCCCcEEEcc--CCCCCCcceEEEEE-CCEEEEEeCCCC-----
Q psy10286 645 VAA---LNNKIYVCGGYDG---AIFLQ---SVEMYDPITDEWKMIA--SMNVMRSRVALVAN-MGKLWAIGGYDG----- 707 (748)
Q Consensus 645 ~~~---~~~~i~v~GG~~~---~~~~~---~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~-~~~l~v~GG~~~----- 707 (748)
++. .+++||++||.+. ...++ .+++||+.+++|..+. .||.+|..|+++.+ +++|||+||.+.
T Consensus 403 av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~ 482 (656)
T 1k3i_A 403 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE 482 (656)
T ss_dssp EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC
T ss_pred eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcC
Confidence 554 4899999999643 23344 8999999999999986 89999999998888 999999999753
Q ss_pred -CCCCCeEEEEeCCCCceEecCCCCCCCcceEEEEe
Q psy10286 708 -VSNLPTVEVYDPSTDSWAFVAPMCAHEGGVGVGVI 742 (748)
Q Consensus 708 -~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 742 (748)
.....++++||+++++|+.+++++.+|.+|+++++
T Consensus 483 ~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~l 518 (656)
T 1k3i_A 483 DSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLL 518 (656)
T ss_dssp CCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEE
T ss_pred CCCcccceEEEcCCCCceeecCCCCCccccccHhhc
Confidence 23467899999999999999999999999998776
No 20
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=2e-34 Score=332.65 Aligned_cols=299 Identities=15% Similarity=0.254 Sum_probs=237.5
Q ss_pred CcEEEEEcCccCCC-----CCCcceEeecCCCCceeecccccc-----cc-eEEecccccccCCC-ccceEEEEeCCCCc
Q psy10286 421 MGHIFAVGGLTKAG-----DSLSTVEVFDPLVGRWQMAEEETL-----SN-AVISTKSCLTKAGD-SLSTVEVFDPLVGR 488 (748)
Q Consensus 421 ~~~i~v~GG~~~~~-----~~~~~~~~y~~~~~~W~~~~~~~~-----~~-~~~~~~~~~~~~g~-~~~~~~~yd~~~~~ 488 (748)
+++||++||..... .....+++||+.+++|..++.... .. .++..++.++..|. ...++++||+.+++
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 89999999975431 234579999999999998875322 11 23345666666654 44589999999999
Q ss_pred eEEccCCCcccceeEEEEE-CCEEEEEcc-CCCCCCCCeEEEEECCCCeEEEc-----cCCCCCcceeEEEEECCEEEEE
Q psy10286 489 WQMAEAMSMLRSRVGVAVM-KNRLYAFGG-YNGSERLSTVEEFDPVRRVWNKV-----SPMCFKRSAVGAAALNDKLYVC 561 (748)
Q Consensus 489 W~~~~~~~~~r~~~~~~~~-~~~iyv~GG-~~~~~~~~~v~~yd~~t~~W~~~-----~~~~~~r~~~~~~~~~~~iyv~ 561 (748)
|.++++|+.+|.+|+++++ +++|||+|| .++....+++++||+.+++|+.+ ++|+.+|.. +++..++++|++
T Consensus 277 W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~ 355 (656)
T 1k3i_A 277 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLF 355 (656)
T ss_dssp EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEE
T ss_pred eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEE
Confidence 9999999999999999999 999999999 45566788999999999999997 566666653 555579999999
Q ss_pred eCCCCC----CCCceEEEEeCCCCeEEEccC-CCC------CCcceEEEE---ECCEEEEEccCCC---CcccC---eEE
Q psy10286 562 GGYDGV----SSLNTVECYEPDKDQWRIVKS-MQK------HRSAGGVIA---FDSYVYALGGHDG---LSIFD---SVE 621 (748)
Q Consensus 562 GG~~~~----~~~~~~~~yd~~~~~W~~~~~-~~~------~r~~~~~~~---~~~~iyv~GG~~~---~~~~~---~~~ 621 (748)
||.++. ...++++.||+.+++|..... .+. ++..++++. .+++||++||.++ ...++ .++
T Consensus 356 Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~ 435 (656)
T 1k3i_A 356 GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIIT 435 (656)
T ss_dssp ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEE
T ss_pred ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEE
Confidence 998653 357899999999999875432 221 233455553 5899999999642 23344 799
Q ss_pred EEECCCCcEEEcc--CCCCCCcceeEEEE-CCEEEEEeccCC------CccccEEEEEeCCCCcEEEccCCCCCCcceEE
Q psy10286 622 RYDPKTDEWTSVK--PMLTKRCRLGVAAL-NNKIYVCGGYDG------AIFLQSVEMYDPITDEWKMIASMNVMRSRVAL 692 (748)
Q Consensus 622 ~yd~~~~~W~~~~--~~p~~r~~~~~~~~-~~~i~v~GG~~~------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 692 (748)
+||+.+++|+.+. +||.+|..|+++++ +++|||+||.+. ....+++++||+.+++|+.+++++.+|.+|++
T Consensus 436 ~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~ 515 (656)
T 1k3i_A 436 LGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSI 515 (656)
T ss_dssp CCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEE
T ss_pred cCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccH
Confidence 9999999999986 89999999999988 999999999752 34578999999999999999999999999998
Q ss_pred EEE--CCEEEEEeCCCCC---CCCCeEEEEeCC
Q psy10286 693 VAN--MGKLWAIGGYDGV---SNLPTVEVYDPS 720 (748)
Q Consensus 693 ~~~--~~~l~v~GG~~~~---~~~~~v~~yd~~ 720 (748)
+++ +++|||+||.... ....++++|.|.
T Consensus 516 a~ll~dg~v~v~GG~~~~~~~~~~~~~e~~~Pp 548 (656)
T 1k3i_A 516 SLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPN 548 (656)
T ss_dssp EEECTTSCEEEEECCCCTTCSCCCCEEEEEECG
T ss_pred hhcCCCcEEEecCCCCCCCCCCCeeEEEEEeCh
Confidence 888 9999999996332 234578888874
No 21
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.94 E-value=7.8e-27 Score=220.68 Aligned_cols=155 Identities=21% Similarity=0.353 Sum_probs=126.0
Q ss_pred hHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhcccccccc
Q psy10286 57 LFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQA 136 (748)
Q Consensus 57 ~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (748)
+.+.+.+++.++++++.+|||+|.++|++|+|||.||+++|+||++||.+++.|+....+.+
T Consensus 17 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l------------------ 78 (172)
T 3htm_A 17 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEI------------------ 78 (172)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEE------------------
T ss_pred CHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEe------------------
Confidence 34578889999999999999999999999999999999999999999999888776666665
Q ss_pred ccccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhcccCCcccchhh
Q psy10286 137 MFTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNVLDYYV 216 (748)
Q Consensus 137 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~l~~~ncl~i~~ 216 (748)
+++++++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|+++|.+.+
T Consensus 79 ----------------~~~~~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l---------- 132 (172)
T 3htm_A 79 ----------------NDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNL---------- 132 (172)
T ss_dssp ----------------CSSCHHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTC----------
T ss_pred ----------------cCCCHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhC----------
Confidence 899999999999999999999888888888888888888888777777766654
Q ss_pred hhhhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCCCCCcchHHHHHhhcCchHHHHHHHHH
Q psy10286 217 LFSCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNVLGIRQFADTLNCLQLSEAADKY 296 (748)
Q Consensus 217 ~~~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~~~n~~~i~~~a~~~~~~~l~~~~~~~ 296 (748)
+.+||+.++.+|+.++..+|.+.|++|
T Consensus 133 -----------------------------------------------------~~~n~~~~~~~A~~~~~~~L~~~~~~~ 159 (172)
T 3htm_A 133 -----------------------------------------------------SVENAAEILILADLHSADQLKTQAVDF 159 (172)
T ss_dssp -----------------------------------------------------CTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -----------------------------------------------------CHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 444555556667777778888888888
Q ss_pred HHHhhhhhccCc
Q psy10286 297 VQQYFHEVSMSD 308 (748)
Q Consensus 297 i~~~~~~l~~~~ 308 (748)
|.+|+.++++++
T Consensus 160 i~~~~~~v~~s~ 171 (172)
T 3htm_A 160 INYHATDVLETS 171 (172)
T ss_dssp HHHTC-------
T ss_pred HHHHHHHHHcCC
Confidence 888888877653
No 22
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.92 E-value=2.9e-25 Score=200.53 Aligned_cols=128 Identities=25% Similarity=0.503 Sum_probs=117.2
Q ss_pred CccceecchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheeh
Q psy10286 47 DECLVFQQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIV 126 (748)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~ 126 (748)
.....+....|.+.+++.|+++++++.+|||+|.++|++|+|||+||+++|+||++||.+++.+. .
T Consensus 9 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~------------ 74 (138)
T 2z8h_A 9 SAVFAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--L------------ 74 (138)
T ss_dssp TCCCCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--E------------
T ss_pred CCeeEecCCchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--c------------
Confidence 34566788899999999999999999999999999999999999999999999999999876542 1
Q ss_pred hhccccccccccccccccccceeeeec-CCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhc
Q psy10286 127 LAATIPYFQAMFTSDMAESKQREITMQ-GIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKR 205 (748)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~ 205 (748)
.|.++ ++++++|+.+|+|+|||++.++.+++.+|+.+|++||++.|++.|++||.++
T Consensus 75 ----------------------~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 132 (138)
T 2z8h_A 75 ----------------------TVTLPEEVTVKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFK 132 (138)
T ss_dssp ----------------------EEECCTTSCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCC
T ss_pred ----------------------eEEeCCCCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 34444 8999999999999999999999999999999999999999999999999999
Q ss_pred ccCCc
Q psy10286 206 FHPNN 210 (748)
Q Consensus 206 l~~~n 210 (748)
+..+|
T Consensus 133 l~~sn 137 (138)
T 2z8h_A 133 FLDST 137 (138)
T ss_dssp CSCCC
T ss_pred ccccc
Confidence 98876
No 23
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.91 E-value=9.1e-25 Score=192.57 Aligned_cols=118 Identities=35% Similarity=0.556 Sum_probs=106.2
Q ss_pred ecchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccc
Q psy10286 52 FQQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATI 131 (748)
Q Consensus 52 ~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 131 (748)
...+.|.+.+++.++++++++.+|||+|.++|++|+|||+||+++|+||++||.+++.|+....+.+
T Consensus 3 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l------------- 69 (120)
T 2if5_A 3 IPFPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEI------------- 69 (120)
T ss_dssp CCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEEC-------------
T ss_pred cCccchHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEe-------------
Confidence 4567899999999999999999999999999999999999999999999999999887776665555
Q ss_pred cccccccccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhh
Q psy10286 132 PYFQAMFTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLK 203 (748)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~ 203 (748)
+++++++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||.
T Consensus 70 ---------------------~~~~~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 70 ---------------------DFVSAEALTALMDFAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp ---------------------CSSCHHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred ---------------------CCCCHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 899999999999999999999999999999999999999999999999973
No 24
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.91 E-value=3.6e-25 Score=202.82 Aligned_cols=134 Identities=21% Similarity=0.418 Sum_probs=102.4
Q ss_pred hhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhcccccccccc
Q psy10286 59 SQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMF 138 (748)
Q Consensus 59 ~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (748)
+.+.+++.++++++.+|||+|.++|++|+|||.||+++|+||++||.+++.|+....+.+
T Consensus 10 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l-------------------- 69 (145)
T 4eoz_A 10 CRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEI-------------------- 69 (145)
T ss_dssp CCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEE--------------------
T ss_pred HHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEe--------------------
Confidence 568888999999999999999999999999999999999999999999887766555555
Q ss_pred ccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhcccCCcccchhhhh
Q psy10286 139 TSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNVLDYYVLF 218 (748)
Q Consensus 139 ~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~l~~~ncl~i~~~~ 218 (748)
+++++++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|+++|.+.++++||+.++.+|
T Consensus 70 --------------~~~~~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A 135 (145)
T 4eoz_A 70 --------------NDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILA 135 (145)
T ss_dssp --------------CSSCHHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC-----------------
T ss_pred --------------cCCCHHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999888777
Q ss_pred hhhHHHHH
Q psy10286 219 SCRAMEAL 226 (748)
Q Consensus 219 ~~~~~~~l 226 (748)
..+.+..|
T Consensus 136 ~~~~~~~L 143 (145)
T 4eoz_A 136 DLHSADQL 143 (145)
T ss_dssp --------
T ss_pred HHhCHHHh
Confidence 66655443
No 25
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.91 E-value=9e-25 Score=198.31 Aligned_cols=125 Identities=17% Similarity=0.491 Sum_probs=108.3
Q ss_pred CccceecchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheeh
Q psy10286 47 DECLVFQQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIV 126 (748)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~ 126 (748)
.+...+..+.|.+.++++|+++++++.+|||+|.++|++|+|||+||+++|+||++||.+++.+.
T Consensus 20 ~~~~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~--------------- 84 (144)
T 2ppi_A 20 FQSMAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKD--------------- 84 (144)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC------------------
T ss_pred eeeeeecCcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccc---------------
Confidence 34567888899999999999999999999999999999999999999999999999999877652
Q ss_pred hhccccccccccccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhh
Q psy10286 127 LAATIPYFQAMFTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLK 203 (748)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~ 203 (748)
++...+|.++++++++|+.+|+|+|||++.++.+++.+|+.+|++|+++.|++.|++||+
T Consensus 85 -----------------e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 85 -----------------DGSTYKIELEGISVMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp -------------------CCCEEECCSSCHHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred -----------------cCCCcEEEeCCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 112234555999999999999999999999999999999999999999999999999974
No 26
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.90 E-value=1.4e-24 Score=190.68 Aligned_cols=115 Identities=22% Similarity=0.414 Sum_probs=104.4
Q ss_pred cchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhcccc
Q psy10286 53 QQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIP 132 (748)
Q Consensus 53 ~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 132 (748)
..+.|.+.+++.|+++++++.+|||+|.++|++|+|||+||+++|+||++||.+++ ...
T Consensus 3 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~----------------- 61 (119)
T 3b84_A 3 SFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGS----------------- 61 (119)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCC-----------------
T ss_pred ccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCe-----------------
Confidence 35689999999999999999999999999999999999999999999999998764 233
Q ss_pred ccccccccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhc
Q psy10286 133 YFQAMFTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKR 205 (748)
Q Consensus 133 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~ 205 (748)
|.++++++++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||.+.
T Consensus 62 -----------------i~l~~~~~~~f~~ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 62 -----------------VVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp -----------------EEECGGGHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred -----------------EEeCCCCHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 44489999999999999999999999999999999999999999999999999763
No 27
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.90 E-value=2.6e-24 Score=223.84 Aligned_cols=154 Identities=21% Similarity=0.360 Sum_probs=119.7
Q ss_pred HhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccccccc
Q psy10286 58 FSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAM 137 (748)
Q Consensus 58 ~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (748)
.+.+.++|.++++++.+|||+|.++|++|+|||+|||++|+||++||.+++.|+....|.+
T Consensus 158 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l------------------- 218 (312)
T 3hqi_A 158 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEI------------------- 218 (312)
T ss_dssp CCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEE-------------------
T ss_pred CchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEe-------------------
Confidence 3578899999999999999999999999999999999999999999999887776665555
Q ss_pred cccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhcccCCcccchhhh
Q psy10286 138 FTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNVLDYYVL 217 (748)
Q Consensus 138 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~l~~~ncl~i~~~ 217 (748)
+++++++|+.+|+|+|||++.++.+++.+|+.+|++|+++.|++.|+++|.+.
T Consensus 219 ---------------~~~~~~~f~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~------------ 271 (312)
T 3hqi_A 219 ---------------NDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSN------------ 271 (312)
T ss_dssp ---------------CSSCHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT------------
T ss_pred ---------------cCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHcc------------
Confidence 99999999999999999999888888888888888888877777777776665
Q ss_pred hhhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCCCCCcchHHHHHhhcCchHHHHHHHHHH
Q psy10286 218 FSCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNVLGIRQFADTLNCLQLSEAADKYV 297 (748)
Q Consensus 218 ~~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~~~n~~~i~~~a~~~~~~~l~~~~~~~i 297 (748)
++.+||+.++.+|+.+++.+|.++|++||
T Consensus 272 ---------------------------------------------------~~~~n~~~~l~~A~~~~~~~L~~~~~~~i 300 (312)
T 3hqi_A 272 ---------------------------------------------------LSVENAAEILILADLHSADQLKTQAVDFI 300 (312)
T ss_dssp ---------------------------------------------------CCTTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ---------------------------------------------------CCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 44445555566677777777888888888
Q ss_pred HHhhhhhccCc
Q psy10286 298 QQYFHEVSMSD 308 (748)
Q Consensus 298 ~~~~~~l~~~~ 308 (748)
..|+.++++++
T Consensus 301 ~~~~~~v~~s~ 311 (312)
T 3hqi_A 301 NYHATDVLETS 311 (312)
T ss_dssp HHTC-------
T ss_pred HHHHHHHhhCC
Confidence 88887776643
No 28
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.90 E-value=3.6e-24 Score=190.68 Aligned_cols=122 Identities=27% Similarity=0.470 Sum_probs=111.5
Q ss_pred cceecchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhh
Q psy10286 49 CLVFQQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLA 128 (748)
Q Consensus 49 ~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 128 (748)
...+..+.|.+.+++.|+++++++.+|||+|.++|++|+|||+||+++|+||++||.+++.| ..
T Consensus 4 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~--------------- 67 (127)
T 1r29_A 4 DSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NL--------------- 67 (127)
T ss_dssp -CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TC---------------
T ss_pred CccccchhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CC---------------
Confidence 34567789999999999999999999999999999999999999999999999999987765 22
Q ss_pred ccccccccccccccccccceeeee-cCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhc
Q psy10286 129 ATIPYFQAMFTSDMAESKQREITM-QGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKR 205 (748)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~ 205 (748)
..|.+ +++++++|+.+|+|+|||++.++.+++.+|+.+|++|+++.|++.|++||.++
T Consensus 68 -------------------~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 68 -------------------SVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp -------------------SEEECCTTSCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred -------------------CEEEeCCCCCHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 34666 78999999999999999999999999999999999999999999999999864
No 29
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.90 E-value=1.2e-24 Score=193.14 Aligned_cols=119 Identities=25% Similarity=0.515 Sum_probs=109.0
Q ss_pred ccceecchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehh
Q psy10286 48 ECLVFQQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVL 127 (748)
Q Consensus 48 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~ 127 (748)
....+.+..|.+.+++.|+++++++.+|||+|.++|++|+|||+||+++|+||++||.+.+.+ ..
T Consensus 6 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~------------- 70 (125)
T 3ohu_A 6 PMYVYESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DL------------- 70 (125)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SC-------------
T ss_pred cceeeecHHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--Cc-------------
Confidence 355677889999999999999999999999999999999999999999999999999987655 23
Q ss_pred hccccccccccccccccccceeeeecC-CCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHh
Q psy10286 128 AATIPYFQAMFTSDMAESKQREITMQG-IDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFL 202 (748)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l 202 (748)
+|.+++ +++++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||
T Consensus 71 ---------------------~i~l~~~~~~~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 71 ---------------------VVSLPEEVTARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp ---------------------EEECCTTCCHHHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred ---------------------EEEeCCCCCHHHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 344477 999999999999999999999999999999999999999999998875
No 30
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.90 E-value=1.8e-24 Score=191.42 Aligned_cols=120 Identities=28% Similarity=0.532 Sum_probs=107.6
Q ss_pred ccceecchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehh
Q psy10286 48 ECLVFQQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVL 127 (748)
Q Consensus 48 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~ 127 (748)
+...+.++.|.+.+++.|+++++++.+|||+|.++|++|+|||+|||++|+||++||.+++.+.
T Consensus 3 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~---------------- 66 (124)
T 2ihc_A 3 SVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE---------------- 66 (124)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C----------------
T ss_pred ceeeecCcchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC----------------
Confidence 4566788899999999999999999999999999999999999999999999999999876543
Q ss_pred hccccccccccccccccccceeeee-cCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhh
Q psy10286 128 AATIPYFQAMFTSDMAESKQREITM-QGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLK 203 (748)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~ 203 (748)
..|.+ +++++++|+.+|+|+|||++.++.+++.+++.+|++||++.|++.|++||+
T Consensus 67 --------------------~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 67 --------------------LNITLPEEVTVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp --------------------EEEECCTTSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred --------------------ceEeecCCcCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 13444 489999999999999999999999999999999999999999999999975
No 31
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.90 E-value=2.2e-24 Score=193.68 Aligned_cols=117 Identities=21% Similarity=0.377 Sum_probs=101.5
Q ss_pred chhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccc
Q psy10286 54 QLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPY 133 (748)
Q Consensus 54 ~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 133 (748)
+..|.+.+++.|+++++++.+|||+|.++|++|+|||+||+++|+||++||.+++ ..
T Consensus 5 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~------------------- 61 (135)
T 2yy9_A 5 SSGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GG------------------- 61 (135)
T ss_dssp --CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------C-------------------
T ss_pred cccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CC-------------------
Confidence 4578999999999999999999999999999999999999999999999998765 22
Q ss_pred cccccccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhcccC
Q psy10286 134 FQAMFTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHP 208 (748)
Q Consensus 134 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~l~~ 208 (748)
+|.++++++++|+.+|+|+|||++.++.+++.+|+.+|++|+++.|++.|++||.+.+..
T Consensus 62 ---------------~i~l~~~~~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 62 ---------------SVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp ---------------CEEECGGGHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred ---------------eEEeCCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 344589999999999999999999999999999999999999999999999999987544
No 32
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.90 E-value=4.8e-24 Score=186.57 Aligned_cols=115 Identities=25% Similarity=0.485 Sum_probs=103.1
Q ss_pred chhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccc
Q psy10286 54 QLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPY 133 (748)
Q Consensus 54 ~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 133 (748)
.+.|.+.++++++++++++.+|||+|.++|++|+|||+||+++|+||++||.++ ....+.+
T Consensus 2 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l--------------- 62 (116)
T 2vpk_A 2 MSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFL--------------- 62 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEEC---------------
T ss_pred chhHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEe---------------
Confidence 357899999999999999999999999999999999999999999999999875 1223333
Q ss_pred cccccccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhh
Q psy10286 134 FQAMFTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKK 204 (748)
Q Consensus 134 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~ 204 (748)
.++++++++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||.+
T Consensus 63 -----------------~~~~~~~~~f~~ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 63 -----------------DQSQVKADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp -----------------CTTTCCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred -----------------ecCCCCHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 113999999999999999999999999999999999999999999999999864
No 33
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.90 E-value=8.8e-24 Score=186.20 Aligned_cols=117 Identities=23% Similarity=0.475 Sum_probs=107.6
Q ss_pred ceecchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhc
Q psy10286 50 LVFQQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAA 129 (748)
Q Consensus 50 ~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 129 (748)
..+.++.|.+.+.+.++++++++.+|||+|.++|++|+|||+||+++|+||++||.++ ...
T Consensus 4 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~-------------- 64 (121)
T 1buo_A 4 IQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQH-------------- 64 (121)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSE--------------
T ss_pred eeccCcchHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcE--------------
Confidence 3467788999999999999999999999999999999999999999999999999763 223
Q ss_pred cccccccccccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhc
Q psy10286 130 TIPYFQAMFTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKR 205 (748)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~ 205 (748)
|.++++++++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||.+.
T Consensus 65 --------------------i~l~~~~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 65 --------------------YTLDFLSPKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp --------------------EEECSSCHHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred --------------------EEeCCCCHHHHHHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 44489999999999999999999999999999999999999999999999999863
No 34
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.89 E-value=6.3e-24 Score=189.46 Aligned_cols=120 Identities=27% Similarity=0.550 Sum_probs=103.4
Q ss_pred ccceecchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehh
Q psy10286 48 ECLVFQQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVL 127 (748)
Q Consensus 48 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~ 127 (748)
+...+..+.|.+.+++.|+++++++.+|||+|.++|++|+|||+||+++|+||++||.+. ...
T Consensus 7 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~------------- 69 (129)
T 3ga1_A 7 QTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSA------------- 69 (129)
T ss_dssp CEEEEECTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCS-------------
T ss_pred ceEEeecCcHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCC-------------
Confidence 456677889999999999999999999999999999999999999999999999999875 222
Q ss_pred hccccccccccccccccccceeeeec-CCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhc
Q psy10286 128 AATIPYFQAMFTSDMAESKQREITMQ-GIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKR 205 (748)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~ 205 (748)
+|.++ ++++++|+.+|+|+|||++.++.+++.+++.+|++||++.|++.|++||.+.
T Consensus 70 ---------------------~i~l~~~~~~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 70 ---------------------VVELPAAVQPQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp ---------------------EEECCTTCCHHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred ---------------------EEEECCCCCHHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 45556 8999999999999999999999999999999999999999999999999874
No 35
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.89 E-value=9e-24 Score=185.41 Aligned_cols=113 Identities=27% Similarity=0.527 Sum_probs=104.2
Q ss_pred ecchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccc
Q psy10286 52 FQQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATI 131 (748)
Q Consensus 52 ~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 131 (748)
+..+.|.+.+++.++++++++.+|||+|.++|++|+|||+||+++|+||++||.+. .
T Consensus 5 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----~------------------ 61 (119)
T 2q81_A 5 SDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----K------------------ 61 (119)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----C------------------
T ss_pred cccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----C------------------
Confidence 44578999999999999999999999999999999999999999999999999762 1
Q ss_pred cccccccccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhh
Q psy10286 132 PYFQAMFTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLK 203 (748)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~ 203 (748)
.+|.++++++++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||.
T Consensus 62 ----------------~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 62 ----------------DVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp ----------------SGGGGGGCCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ----------------CEEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 13445889999999999999999999999999999999999999999999999985
No 36
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.88 E-value=3e-23 Score=179.58 Aligned_cols=104 Identities=27% Similarity=0.476 Sum_probs=91.7
Q ss_pred HHhcCCcccEEEEECC----eEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccccccccccccc
Q psy10286 68 IRRQGKLCDVTIKVDD----QSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMA 143 (748)
Q Consensus 68 l~~~~~~~Dv~i~~~~----~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (748)
|++++.+|||+|.+++ ++|+|||.||+++|+||++||.+++.|+. ..+.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l------------------------- 55 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHI------------------------- 55 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEE-------------------------
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEe-------------------------
Confidence 5789999999999988 89999999999999999999999887765 55555
Q ss_pred cccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhhcc
Q psy10286 144 ESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRF 206 (748)
Q Consensus 144 ~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~l 206 (748)
+++++++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||.+++
T Consensus 56 ---------~~~~~~~f~~~l~~iYt~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 56 ---------PDVEPAAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp ---------TTSCHHHHHHHHHHHHHCCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ---------CCCCHHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 899999999999999999999999999999999999999999999999998753
No 37
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.86 E-value=5.4e-22 Score=173.05 Aligned_cols=104 Identities=25% Similarity=0.349 Sum_probs=90.9
Q ss_pred hhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccccc
Q psy10286 56 DLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQ 135 (748)
Q Consensus 56 ~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (748)
.+...+++.|+ ++++.+|||+|.++|++|+|||+|||++|+||++ ...
T Consensus 14 ~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~--------------------- 61 (119)
T 3m5b_A 14 YGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQ--------------------- 61 (119)
T ss_dssp TTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEE---------------------
T ss_pred cchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCC---------------------
Confidence 45566777775 6779999999999999999999999999999984 112
Q ss_pred cccccccccccceeeeecCCCHHHHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHhhh
Q psy10286 136 AMFTSDMAESKQREITMQGIDAVAMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKK 204 (748)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~ 204 (748)
+|.++++++++|+.+|+|+|||++.++.+|+++++.+|++||++.|++.|++++.+
T Consensus 62 -------------~i~l~~v~~~~f~~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 62 -------------WALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp -------------EECCSSCCHHHHHHHHHHHTTCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred -------------EEEeCCCCHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 34559999999999999999999999999999999999999999999999999876
No 38
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.85 E-value=7.7e-22 Score=171.83 Aligned_cols=110 Identities=23% Similarity=0.480 Sum_probs=100.1
Q ss_pred ccceecchhhHhhHHHHHHHHHhcCCcccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehh
Q psy10286 48 ECLVFQQLDLFSQGFPVMEEIRRQGKLCDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVL 127 (748)
Q Consensus 48 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~ 127 (748)
....+.++.|.+.+++.++++++++.+|||+|.++|++|+|||+|||++|+||++||.++ ..
T Consensus 5 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~------------- 66 (116)
T 3fkc_A 5 KLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQ------------- 66 (116)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CS-------------
T ss_pred ceeeecCccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CC-------------
Confidence 345667888999999999999999999999999999999999999999999999999874 22
Q ss_pred hccccccccccccccccccceeeeecCCCHHHHHHHHHhhhceeE-EeechhHHHHHHHHHHhcchhHHH
Q psy10286 128 AATIPYFQAMFTSDMAESKQREITMQGIDAVAMEALINFVYSGRV-TIHSQNVQSLMVVASFLQMQKVAD 196 (748)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~flYtg~~-~i~~~~v~~ll~~A~~l~i~~l~~ 196 (748)
+|.++++++++|+.+|+|+|||++ .++.+++.+++.+|++||++.|++
T Consensus 67 ---------------------~i~l~~~~~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 67 ---------------------VVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp ---------------------EEEECSSCHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred ---------------------EEEeCCCCHHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 344589999999999999999999 799999999999999999999874
No 39
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=1.2e-15 Score=129.20 Aligned_cols=95 Identities=20% Similarity=0.289 Sum_probs=90.6
Q ss_pred hhcCCCCCcchHHHHHhhcCchHHHHHHHHHHHHhhhhhccCcccccCCHHhHhcccccCCcCCCChHHHHHHHHHHHhc
Q psy10286 266 KKRFHPNNVLGIRQFADTLNCLQLSEAADKYVQQYFHEVSMSDEFIGLGVNEVNDIVKRSELHLMSEEQVFEAVMRWVKH 345 (748)
Q Consensus 266 ~~~l~~~n~~~i~~~a~~~~~~~l~~~~~~~i~~~~~~l~~~~~f~~L~~~~l~~il~~~~l~~~~E~~v~~~v~~W~~~ 345 (748)
.++++++||++++.+|+.+++.+|.++|.+||.+||.++.++++|..|+.+.|..+++++ +.+|++||+|+++|+++
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv~~ 81 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWINF 81 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999999999999999999999999999999997 67999999999999999
Q ss_pred CccCCCCCHHHHHhhccC
Q psy10286 346 NASERAPSLPRLLAAVRL 363 (748)
Q Consensus 346 ~~~~r~~~~~~l~~~vR~ 363 (748)
+.+.|.++++.++++||.
T Consensus 82 d~~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 82 NKEEREAFAESLRTSLKE 99 (105)
T ss_dssp THHHHHHHHHHHHHHCCE
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999999984
No 40
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.35 E-value=7.2e-13 Score=121.35 Aligned_cols=105 Identities=11% Similarity=0.276 Sum_probs=86.9
Q ss_pred EEEEE-CCeEEeeeeeeeeccCHHHHHhhcc-ccc-ccccceeeeecchheehhhccccccccccccccccccceeeeec
Q psy10286 77 VTIKV-DDQSFTCHRIVLAATIPYFQAMFTS-DMA-ESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQ 153 (748)
Q Consensus 77 v~i~~-~~~~~~aHk~iL~a~S~~F~~~~~~-~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 153 (748)
|+|+. +|+.|.+||.+ |+.|+||++||.+ ++. |.....| .++
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~I----------------------------------pl~ 47 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPV----------------------------------PLP 47 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CE----------------------------------ECT
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCc----------------------------------CCC
Confidence 67775 79999999999 8999999999987 444 3433444 449
Q ss_pred CCCHHHHHHHHHhhhcee--------------------------EEeechhHHHHHHHHHHhcchhHHHHHHHHhhhccc
Q psy10286 154 GIDAVAMEALINFVYSGR--------------------------VTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFH 207 (748)
Q Consensus 154 ~~~~~~~~~~l~flYtg~--------------------------~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~l~ 207 (748)
+|+..+++.+++|+|++. +.++.+++.+|+.||++|+++.|.+.|+.++...+.
T Consensus 48 ~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~ 127 (159)
T 2ast_A 48 NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 127 (159)
T ss_dssp TSCHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred CccHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 999999999999999988 778899999999999999999999999999998877
Q ss_pred CCcccchhh
Q psy10286 208 PNNVLDYYV 216 (748)
Q Consensus 208 ~~ncl~i~~ 216 (748)
-.++-.|..
T Consensus 128 gkt~eeir~ 136 (159)
T 2ast_A 128 GKTPEEIRK 136 (159)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 666554443
No 41
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.10 E-value=8.2e-11 Score=97.63 Aligned_cols=80 Identities=21% Similarity=0.348 Sum_probs=64.2
Q ss_pred EEEEE-CCeEEeeeeeeeeccCHHHHHhhcc--cccccccceeeeecchheehhhccccccccccccccccccceeeeec
Q psy10286 77 VTIKV-DDQSFTCHRIVLAATIPYFQAMFTS--DMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQ 153 (748)
Q Consensus 77 v~i~~-~~~~~~aHk~iL~a~S~~F~~~~~~--~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 153 (748)
|+|+. +|++|.+||.+ |+.|+||++||.+ .+.|.....| .++
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I----------------------------------~l~ 48 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEV----------------------------------NFR 48 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEE----------------------------------ECT
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCce----------------------------------ECC
Confidence 56665 78999999999 9999999999986 4444444444 449
Q ss_pred CCCHHHHHHHHHhhh-----c---eeEE---eechhHHHHHHHHHHhcc
Q psy10286 154 GIDAVAMEALINFVY-----S---GRVT---IHSQNVQSLMVVASFLQM 191 (748)
Q Consensus 154 ~~~~~~~~~~l~flY-----t---g~~~---i~~~~v~~ll~~A~~l~i 191 (748)
++++.+++.+++|+| + +++. ++.+++.+|+.||++|++
T Consensus 49 ~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 49 EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 97 (97)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCGGGHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCHHHHHHHHHHHhhhCC
Confidence 999999999999999 5 7777 999999999999999984
No 42
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.95 E-value=8.1e-10 Score=98.51 Aligned_cols=101 Identities=10% Similarity=0.228 Sum_probs=84.2
Q ss_pred EEEEE-CCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccccccccccccccccceeeeecCC
Q psy10286 77 VTIKV-DDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQGI 155 (748)
Q Consensus 77 v~i~~-~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 155 (748)
|+|.. +|++|.+||.+ |..|++|++||...- ...|.+ ++|
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl----------------------------------~~V 44 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPL----------------------------------PNV 44 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEEC----------------------------------TTC
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceec----------------------------------CCc
Confidence 67776 88999999998 889999999997631 223444 999
Q ss_pred CHHHHHHHHHhhhcee--------------------------EEeechhHHHHHHHHHHhcchhHHHHHHHHhhhcccCC
Q psy10286 156 DAVAMEALINFVYSGR--------------------------VTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPN 209 (748)
Q Consensus 156 ~~~~~~~~l~flYtg~--------------------------~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~l~~~ 209 (748)
+..+++.+++|+|... +.++.+++.+|+.||++|+++.|.+.|+.++...+.-.
T Consensus 45 ~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgk 124 (141)
T 1fs1_B 45 NAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK 124 (141)
T ss_dssp CHHHHHHHHHHHHHHTTCC-----------------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCC
Confidence 9999999999999876 56788899999999999999999999999999876665
Q ss_pred cccchhh
Q psy10286 210 NVLDYYV 216 (748)
Q Consensus 210 ncl~i~~ 216 (748)
+.-.+..
T Consensus 125 t~eeiR~ 131 (141)
T 1fs1_B 125 TPEEIRK 131 (141)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 5544433
No 43
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.76 E-value=1.5e-09 Score=99.09 Aligned_cols=95 Identities=15% Similarity=0.297 Sum_probs=52.4
Q ss_pred EEEEE-CCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccccccccccccccccceeeeecCC
Q psy10286 77 VTIKV-DDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQGI 155 (748)
Q Consensus 77 v~i~~-~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 155 (748)
|+|.. +|+.|.+||.+ |..|++|+.||.... ... .|.+++|
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~----------------------------------~Ipl~~V 47 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDN----------------------------------GVPLPNV 47 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC-------------------------------------------------CCTTS
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCC----------------------------------ceeCCcC
Confidence 66664 79999999998 889999999997631 112 3445999
Q ss_pred CHHHHHHHHHhhhcee---------------------------EEeechhHHHHHHHHHHhcchhHHHHHHHHhhhcccC
Q psy10286 156 DAVAMEALINFVYSGR---------------------------VTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHP 208 (748)
Q Consensus 156 ~~~~~~~~l~flYtg~---------------------------~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~l~~ 208 (748)
+..+++.+++|+|+.. +.++.+++.+|+.||++|+|+.|.+.|+.++...+.-
T Consensus 48 ~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikg 127 (160)
T 2p1m_A 48 TSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKG 127 (160)
T ss_dssp CHHHHHHHHHC------------------------------------------CHHHHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred cHHHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 9999999999999986 4678889999999999999999999999999887644
Q ss_pred C
Q psy10286 209 N 209 (748)
Q Consensus 209 ~ 209 (748)
.
T Consensus 128 k 128 (160)
T 2p1m_A 128 K 128 (160)
T ss_dssp C
T ss_pred C
Confidence 3
No 44
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.74 E-value=1.1e-09 Score=99.35 Aligned_cols=71 Identities=20% Similarity=0.307 Sum_probs=42.0
Q ss_pred hhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCCCCCcchHHHHHhhcCchHHH
Q psy10286 220 CRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNVLGIRQFADTLNCLQLS 290 (748)
Q Consensus 220 ~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~~~n~~~i~~~a~~~~~~~l~ 290 (748)
...++.+++|+|+|.+.+..+++.+++.+|++|+++.|++.|+++|.+.++.+||+.++.+|+.|++.+|.
T Consensus 74 ~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk 144 (145)
T 4eoz_A 74 PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLK 144 (145)
T ss_dssp HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC--------------------------
T ss_pred HHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhc
Confidence 34567799999999999999999999999999999999999999999999999999999999999988775
No 45
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.54 E-value=5.1e-05 Score=78.73 Aligned_cols=262 Identities=10% Similarity=-0.014 Sum_probs=155.0
Q ss_pred CcceEeecCCCCceeecc-----ccc---ccceEEecccccccCCCccceEEEEeCCCCce-EEccCCCcccceeEEEE-
Q psy10286 437 LSTVEVFDPLVGRWQMAE-----EET---LSNAVISTKSCLTKAGDSLSTVEVFDPLVGRW-QMAEAMSMLRSRVGVAV- 506 (748)
Q Consensus 437 ~~~~~~y~~~~~~W~~~~-----~~~---~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W-~~~~~~~~~r~~~~~~~- 506 (748)
-.++.+||+.++++...- ... ....+...++.++......+.+..+|+.+.+- ..++....| +.++.
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p---~~i~~~ 92 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSP---RYIHFL 92 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSE---EEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCC---cEEEEe
Confidence 367899999998886421 111 12334444555665555557899999998876 334333232 34444
Q ss_pred ECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCC----cceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCe
Q psy10286 507 MKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFK----RSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQ 582 (748)
Q Consensus 507 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 582 (748)
.++++|+.... .+.+.++|+.+++-...-+.... ....+++..++++|+..- ..-+.+.++|+.+++
T Consensus 93 ~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~----~~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 93 SDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW----SYQNRILKIDTETDK 163 (328)
T ss_dssp ETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC----TTCCEEEEEETTTTE
T ss_pred CCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC----CCCCEEEEEECCCCe
Confidence 68899998743 35799999999875432121110 022344457899999852 013589999999988
Q ss_pred EEEccCCCCCCcceEEEE-ECCEEEEEccCCCCcc-----cCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCEEEE
Q psy10286 583 WRIVKSMQKHRSAGGVIA-FDSYVYALGGHDGLSI-----FDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYV 654 (748)
Q Consensus 583 W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~-----~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v 654 (748)
....-+.. ..-+.++. -+|++|+....+.... .+.++++|+.+.+....-..+....-.+++.- ++.+|+
T Consensus 164 ~~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 164 VVDELTIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp EEEEEECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred EEEEEEcC--CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 65432221 11122333 3688888764321111 36899999999886643334333333445544 567888
Q ss_pred EeccCCCccccEEEEEeCCCCcEEEccCCCC-CCcceEEEE--ECCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 655 CGGYDGAIFLQSVEMYDPITDEWKMIASMNV-MRSRVALVA--NMGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 655 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~--~~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
..+ .++++|+.+.+.......+. ...-.++++ .+++|||....+.. ....|.+||+..
T Consensus 242 ~~~--------~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~-~~~~V~v~d~~g 302 (328)
T 3dsm_A 242 INN--------DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQ-QQGIVYRYSPQG 302 (328)
T ss_dssp ESS--------SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSS-SEEEEEEECTTC
T ss_pred Ecc--------EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccc-cCCEEEEECCCC
Confidence 753 78999998877532222222 223344444 36899998732111 124799999984
No 46
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.49 E-value=0.00016 Score=74.89 Aligned_cols=223 Identities=11% Similarity=0.012 Sum_probs=138.1
Q ss_pred cceEEEEeCCCCceEEcc-----CCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeE-EEccCCCCCccee
Q psy10286 476 LSTVEVFDPLVGRWQMAE-----AMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVW-NKVSPMCFKRSAV 549 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~-----~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W-~~~~~~~~~r~~~ 549 (748)
-..+..||+.++++..-- ..+.......++..++++|+.... .+.+.++|+.+.+- ..++... ..+
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~~---~p~ 87 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITGFT---SPR 87 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEECCS---SEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCCCC---CCc
Confidence 467999999999876521 112223445667789999998752 35799999998875 3343322 233
Q ss_pred EEEE-ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCC----CcceEEEEECCEEEEEccCCCCcccCeEEEEE
Q psy10286 550 GAAA-LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKH----RSAGGVIAFDSYVYALGGHDGLSIFDSVERYD 624 (748)
Q Consensus 550 ~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 624 (748)
.++. -++++|+.... -..+.++|+.+++-...-+.... ..-..++..++++|+..-. ..+.+.++|
T Consensus 88 ~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~v~viD 158 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQNRILKID 158 (328)
T ss_dssp EEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCCEEEEEE
T ss_pred EEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCCEEEEEE
Confidence 4444 68899998743 26899999999875432222210 0223445578999998521 135799999
Q ss_pred CCCCcEEEccCCCCCCcceeEEE-ECCEEEEEeccCCCc-----cccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--C
Q psy10286 625 PKTDEWTSVKPMLTKRCRLGVAA-LNNKIYVCGGYDGAI-----FLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--M 696 (748)
Q Consensus 625 ~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~-----~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 696 (748)
+.+++....-+. ...-++++. -++++|+....+... ..+.++++|+.+.+....-..+....-..++.. +
T Consensus 159 ~~t~~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~ 236 (328)
T 3dsm_A 159 TETDKVVDELTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTR 236 (328)
T ss_dssp TTTTEEEEEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTS
T ss_pred CCCCeEEEEEEc--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCC
Confidence 999876543221 111123333 368888876322111 136899999999876643233333333444444 5
Q ss_pred CEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 697 GKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 697 ~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
+.+|+..+ .+++||+.+++..
T Consensus 237 ~~lyv~~~--------~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 237 DTLYWINN--------DIWRMPVEADRVP 257 (328)
T ss_dssp CEEEEESS--------SEEEEETTCSSCC
T ss_pred CEEEEEcc--------EEEEEECCCCcee
Confidence 77888743 6999999887753
No 47
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=98.31 E-value=1.5e-07 Score=84.12 Aligned_cols=54 Identities=28% Similarity=0.635 Sum_probs=49.9
Q ss_pred hhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCCCCC
Q psy10286 220 CRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNN 273 (748)
Q Consensus 220 ~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~~~n 273 (748)
...++.+++|+|+|.+.+..+|+.+|+.+|++|+++.|++.|++||.++++.+|
T Consensus 84 ~~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 84 VKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred HHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 345667999999999999999999999999999999999999999999998776
No 48
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.28 E-value=0.00038 Score=67.46 Aligned_cols=191 Identities=14% Similarity=0.120 Sum_probs=127.7
Q ss_pred cCCCcccce--eEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCC
Q psy10286 493 EAMSMLRSR--VGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSL 570 (748)
Q Consensus 493 ~~~~~~r~~--~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~ 570 (748)
...|..... .++...++.+|+..|..+ .+.+.++|+.+++=...-+++..-.+.+++..+++||+.... -
T Consensus 13 ~~~phd~~~ftqGL~~~~~~LyestG~~g---~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~-----~ 84 (243)
T 3mbr_X 13 KRYPHDTTAFTEGLFYLRGHLYESTGETG---RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR-----N 84 (243)
T ss_dssp EEEECCTTCCEEEEEEETTEEEEEECCTT---SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----S
T ss_pred EEcCCCCccccccEEEECCEEEEECCCCC---CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee-----C
Confidence 333444433 477778999999988654 357899999999877666777777778889999999998653 3
Q ss_pred ceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEE-c--cCCCCC-CcceeEE
Q psy10286 571 NTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTS-V--KPMLTK-RCRLGVA 646 (748)
Q Consensus 571 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~--~~~p~~-r~~~~~~ 646 (748)
+.+++||+.+.+-. ...+.+..+.+++.-++++|+--|. +.++.+||++.+-.. + ...+.+ +..-.+.
T Consensus 85 ~~v~v~D~~tl~~~--~ti~~~~~Gwglt~dg~~L~vSdgs------~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe 156 (243)
T 3mbr_X 85 HEGFVYDLATLTPR--ARFRYPGEGWALTSDDSHLYMSDGT------AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE 156 (243)
T ss_dssp SEEEEEETTTTEEE--EEEECSSCCCEEEECSSCEEEECSS------SEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred CEEEEEECCcCcEE--EEEeCCCCceEEeeCCCEEEEECCC------CeEEEEeCCCCeEEEEEEEccCCcccccceeeE
Confidence 68999999886643 3333344567777778889998663 579999999976432 2 122222 1222344
Q ss_pred EECCEEEEEeccCCCccccEEEEEeCCCCc---EEEccCCCC-------CC--cceEEEEE--CCEEEEEeC
Q psy10286 647 ALNNKIYVCGGYDGAIFLQSVEMYDPITDE---WKMIASMNV-------MR--SRVALVAN--MGKLWAIGG 704 (748)
Q Consensus 647 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~-------~r--~~~~~~~~--~~~l~v~GG 704 (748)
..+++||+--- ..+.|.+.|+++.+ |..++.+.. +. .--+.+.. ++++||.|-
T Consensus 157 ~~~G~lyanvw-----~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 157 WVNGELLANVW-----LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EETTEEEEEET-----TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EeCCEEEEEEC-----CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 56899885542 24799999999976 555554321 11 11344443 589999985
No 49
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.25 E-value=1.1e-07 Score=81.31 Aligned_cols=50 Identities=22% Similarity=0.432 Sum_probs=45.4
Q ss_pred hhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcC
Q psy10286 220 CRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRF 269 (748)
Q Consensus 220 ~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l 269 (748)
...++.+++|+|+|.+.+..+|+.+++.+|++|+++.|++.|++||.++|
T Consensus 60 ~~~f~~~l~~iYt~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 60 PAAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp HHHHHHHHHHHHHCCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 34667799999999999999999999999999999999999999998643
No 50
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.21 E-value=3.8e-07 Score=81.02 Aligned_cols=52 Identities=19% Similarity=0.420 Sum_probs=44.0
Q ss_pred hhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCCC
Q psy10286 220 CRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHP 271 (748)
Q Consensus 220 ~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~~ 271 (748)
...|+.+++|+|+|.+.+..+|+.+|+.+|++|+++.|++.|++||.+++..
T Consensus 70 ~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 70 AEIFGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 3466779999999999999999999999999999999999999999876543
No 51
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.18 E-value=0.0029 Score=66.61 Aligned_cols=259 Identities=14% Similarity=0.147 Sum_probs=150.5
Q ss_pred cCcEEEEEcCccCCCCCCcceEeecCCCCc--eeeccc----------ccccceEEecccccccCCCccceEEEEeCCCC
Q psy10286 420 VMGHIFAVGGLTKAGDSLSTVEVFDPLVGR--WQMAEE----------ETLSNAVISTKSCLTKAGDSLSTVEVFDPLVG 487 (748)
Q Consensus 420 ~~~~i~v~GG~~~~~~~~~~~~~y~~~~~~--W~~~~~----------~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~ 487 (748)
.++.||+.... ..+.+||+.+++ |..... ..........++.++... ....+..+|..++
T Consensus 52 ~~~~v~~~~~~-------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~~g~l~a~d~~tG 123 (376)
T 3q7m_A 52 ADNVVYAADRA-------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGS-EKAQVYALNTSDG 123 (376)
T ss_dssp ETTEEEEECTT-------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEE-TTSEEEEEETTTC
T ss_pred ECCEEEEEcCC-------CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEc-CCCEEEEEECCCC
Confidence 57788886532 368899987654 654332 112222333344444332 2357999999887
Q ss_pred c--eEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCCC--CcceeEEEEECCEEEEE
Q psy10286 488 R--WQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMCF--KRSAVGAAALNDKLYVC 561 (748)
Q Consensus 488 ~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~--~r~~~~~~~~~~~iyv~ 561 (748)
+ |+.-..-. ...+.++.++.+|+..+ ...++.||+.+++ |+.....+. .+...+.+..++.+|+
T Consensus 124 ~~~W~~~~~~~---~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~- 193 (376)
T 3q7m_A 124 TVAWQTKVAGE---ALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVV- 193 (376)
T ss_dssp CEEEEEECSSC---CCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEE-
T ss_pred CEEEEEeCCCc---eEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEE-
Confidence 5 75532211 11223455888887543 2479999998775 876543221 1222334455788776
Q ss_pred eCCCCCCCCceEEEEeCCCCe--EEEccCCCCCC--------cceEEEEECCEEEEEccCCCCcccCeEEEEECCCC--c
Q psy10286 562 GGYDGVSSLNTVECYEPDKDQ--WRIVKSMQKHR--------SAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTD--E 629 (748)
Q Consensus 562 GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~ 629 (748)
|..+ ..+..+|+.+++ |+.-...+... .....+..++.+|+.+.. ..+.++|+.+. .
T Consensus 194 g~~~-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~------g~l~~~d~~tG~~~ 262 (376)
T 3q7m_A 194 GGDN-----GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYN------GNLTALDLRSGQIM 262 (376)
T ss_dssp CCTT-----TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTT------SCEEEEETTTCCEE
T ss_pred EcCC-----CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecC------cEEEEEECCCCcEE
Confidence 3321 468999987664 77654332211 223445568888886531 36899999876 4
Q ss_pred EEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc--EEEccCCCCCCcceEEEEECCEEEEEeCCCC
Q psy10286 630 WTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE--WKMIASMNVMRSRVALVANMGKLWAIGGYDG 707 (748)
Q Consensus 630 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~ 707 (748)
|+.-.. ...+.+..++.||+... ...+++||+++.+ |+.-. ++ .+...+.+..++.||+...
T Consensus 263 w~~~~~-----~~~~~~~~~~~l~~~~~------~g~l~~~d~~tG~~~w~~~~-~~-~~~~~~~~~~~~~l~v~~~--- 326 (376)
T 3q7m_A 263 WKRELG-----SVNDFIVDGNRIYLVDQ------NDRVMALTIDGGVTLWTQSD-LL-HRLLTSPVLYNGNLVVGDS--- 326 (376)
T ss_dssp EEECCC-----CEEEEEEETTEEEEEET------TCCEEEEETTTCCEEEEECT-TT-TSCCCCCEEETTEEEEECT---
T ss_pred eeccCC-----CCCCceEECCEEEEEcC------CCeEEEEECCCCcEEEeecc-cC-CCcccCCEEECCEEEEEeC---
Confidence 765321 12345566889998764 2468999998765 76531 11 2223344556888887642
Q ss_pred CCCCCeEEEEeCCCCc--eEe
Q psy10286 708 VSNLPTVEVYDPSTDS--WAF 726 (748)
Q Consensus 708 ~~~~~~v~~yd~~~~~--W~~ 726 (748)
...+++||+.+++ |+.
T Consensus 327 ---~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 327 ---EGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp ---TSEEEEEETTTCCEEEEE
T ss_pred ---CCeEEEEECCCCcEEEEE
Confidence 1369999998876 543
No 52
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.13 E-value=6.3e-06 Score=69.27 Aligned_cols=98 Identities=13% Similarity=0.261 Sum_probs=74.6
Q ss_pred cEEEEECCeEEeeeeeeeeccC-HHHHHhhcccccccccceeeeecchheehhhccccccccccccccccccceeeeecC
Q psy10286 76 DVTIKVDDQSFTCHRIVLAATI-PYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQG 154 (748)
Q Consensus 76 Dv~i~~~~~~~~aHk~iL~a~S-~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 154 (748)
=|+|.|+|+.|...+..|+... .+|.+||.+...-.. ......++-+ +
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~------------------------------~~d~~~~~fi-D 55 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDS------------------------------DKDETGAYLI-D 55 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGG------------------------------GBCTTSCEEE-C
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCc------------------------------CCCCCceEEe-c
Confidence 4688899999999999998764 478899876421000 0001222322 6
Q ss_pred CCHHHHHHHHHhhhceeEEeech-hHHHHHHHHHHhcchhHHHHHHHHhhh
Q psy10286 155 IDAVAMEALINFVYSGRVTIHSQ-NVQSLMVVASFLQMQKVADACADFLKK 204 (748)
Q Consensus 155 ~~~~~~~~~l~flYtg~~~i~~~-~v~~ll~~A~~l~i~~l~~~c~~~l~~ 204 (748)
-++..|+.+|+|+.+|++.++.+ ....+++-|++|++++|++.|.+-+.+
T Consensus 56 Rdp~~F~~IL~~lr~g~l~~p~~~~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 56 RDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp SCHHHHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHhCCCeeCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 79999999999999999987665 467899999999999999999987754
No 53
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.13 E-value=0.0026 Score=66.96 Aligned_cols=253 Identities=15% Similarity=0.160 Sum_probs=143.3
Q ss_pred cCcEEEEEcCccCCCCCCcceEeecCCCCc--eeecccccccceEEecccccccCCCccceEEEEeCCCCc--eEEccCC
Q psy10286 420 VMGHIFAVGGLTKAGDSLSTVEVFDPLVGR--WQMAEEETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGR--WQMAEAM 495 (748)
Q Consensus 420 ~~~~i~v~GG~~~~~~~~~~~~~y~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~--W~~~~~~ 495 (748)
.++.||+.... ..+.++|+.+++ |...............++.++.. .....++.+|+.+++ |..-...
T Consensus 102 ~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~-~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 102 SGGHVYIGSEK-------AQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIH-TSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp ETTEEEEEETT-------SEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEE-CTTSEEEEEETTTCCEEEEEECCC
T ss_pred eCCEEEEEcCC-------CEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEE-cCCCeEEEEECCCCcEEEEEeCCC
Confidence 46677764321 368999988765 65543322222222223333332 223479999998876 8664432
Q ss_pred Cc--ccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCCCCc--------ceeEEEEECCEEEEEeC
Q psy10286 496 SM--LRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMCFKR--------SAVGAAALNDKLYVCGG 563 (748)
Q Consensus 496 ~~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~r--------~~~~~~~~~~~iyv~GG 563 (748)
+. .+...+.++.++.+|+ |.. ...+..||+.+.+ |+.....+... .....+..++.+|+.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~v~~-g~~-----~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~ 247 (376)
T 3q7m_A 174 PSLSLRGESAPTTAFGAAVV-GGD-----NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY 247 (376)
T ss_dssp -----CCCCCCEEETTEEEE-CCT-----TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT
T ss_pred CceeecCCCCcEEECCEEEE-EcC-----CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec
Confidence 21 1222334555888777 322 2368999998764 77643322211 11233455888887642
Q ss_pred CCCCCCCceEEEEeCCCCe--EEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCc--EEEccCCCCC
Q psy10286 564 YDGVSSLNTVECYEPDKDQ--WRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDE--WTSVKPMLTK 639 (748)
Q Consensus 564 ~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~ 639 (748)
-..+.++|+.+++ |+.-.. .....+..++.+|+.... ..++++|+.+.+ |+.-. . ..
T Consensus 248 ------~g~l~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~l~~~~~~------g~l~~~d~~tG~~~w~~~~-~-~~ 308 (376)
T 3q7m_A 248 ------NGNLTALDLRSGQIMWKRELG-----SVNDFIVDGNRIYLVDQN------DRVMALTIDGGVTLWTQSD-L-LH 308 (376)
T ss_dssp ------TSCEEEEETTTCCEEEEECCC-----CEEEEEEETTEEEEEETT------CCEEEEETTTCCEEEEECT-T-TT
T ss_pred ------CcEEEEEECCCCcEEeeccCC-----CCCCceEECCEEEEEcCC------CeEEEEECCCCcEEEeecc-c-CC
Confidence 1368899998764 765421 123456678999987642 369999998775 76531 1 22
Q ss_pred CcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc--EEEccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEE
Q psy10286 640 RCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE--WKMIASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVY 717 (748)
Q Consensus 640 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~y 717 (748)
+...+.+..++.||+... ...++++|+.+.+ |+.- ++........+..+++||+... + ..++.|
T Consensus 309 ~~~~~~~~~~~~l~v~~~------~g~l~~~d~~tG~~~~~~~--~~~~~~~~~~~~~~~~l~v~~~-~-----G~l~~~ 374 (376)
T 3q7m_A 309 RLLTSPVLYNGNLVVGDS------EGYLHWINVEDGRFVAQQK--VDSSGFQTEPVAADGKLLIQAK-D-----GTVYSI 374 (376)
T ss_dssp SCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEE--CCTTCBCSCCEEETTEEEEEBT-T-----SCEEEE
T ss_pred CcccCCEEECCEEEEEeC------CCeEEEEECCCCcEEEEEe--cCCCcceeCCEEECCEEEEEeC-C-----CEEEEE
Confidence 333445567888887643 2479999998876 5542 2112223334556899888642 1 247777
Q ss_pred eC
Q psy10286 718 DP 719 (748)
Q Consensus 718 d~ 719 (748)
|+
T Consensus 375 ~~ 376 (376)
T 3q7m_A 375 TR 376 (376)
T ss_dssp EC
T ss_pred eC
Confidence 63
No 54
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.12 E-value=7.2e-07 Score=77.30 Aligned_cols=47 Identities=23% Similarity=0.514 Sum_probs=42.6
Q ss_pred hHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhh
Q psy10286 221 RAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKK 267 (748)
Q Consensus 221 ~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~ 267 (748)
..++.+++|+|+|.+.+..+|+.+++.+|++|+++.|++.|++||.+
T Consensus 70 ~~f~~ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 70 EIFGLLLDFFYTGHLALTSGNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp HHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred HHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 46677999999999999999999999999999999999999999874
No 55
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.12 E-value=2.2e-07 Score=80.82 Aligned_cols=47 Identities=34% Similarity=0.694 Sum_probs=43.2
Q ss_pred hhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHh
Q psy10286 220 CRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLK 266 (748)
Q Consensus 220 ~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~ 266 (748)
...++.+++|+|+|.+.+..+++.+++.+|++|+++.|++.|++||.
T Consensus 74 ~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 74 AEALTALMDFAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 35667799999999999999999999999999999999999999973
No 56
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.11 E-value=4e-06 Score=69.17 Aligned_cols=80 Identities=20% Similarity=0.356 Sum_probs=65.5
Q ss_pred cEEEEE-CCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccccccccccccccccceeeeecC
Q psy10286 76 DVTIKV-DDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQG 154 (748)
Q Consensus 76 Dv~i~~-~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 154 (748)
-|+|.. +|++|.++|.+ |..|.+++.||..+. +.....|.+ ++
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Ipl----------------------------------p~ 48 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIEL----------------------------------KQ 48 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEE----------------------------------TT
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceec----------------------------------CC
Confidence 367776 89999999997 789999999998744 333344555 99
Q ss_pred CCHHHHHHHHHhhhcee--------------EEeechhHHHHHHHHHHhcc
Q psy10286 155 IDAVAMEALINFVYSGR--------------VTIHSQNVQSLMVVASFLQM 191 (748)
Q Consensus 155 ~~~~~~~~~l~flYtg~--------------~~i~~~~v~~ll~~A~~l~i 191 (748)
|+..+++.+++|+|.-. ..++.+.+.+|+.||++|++
T Consensus 49 V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 49 FDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHHHHhcccCCCccccccCCCccCCHHHHHHHHHHHHHhCc
Confidence 99999999999999744 35778889999999999985
No 57
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.11 E-value=0.00028 Score=74.63 Aligned_cols=264 Identities=20% Similarity=0.208 Sum_probs=141.2
Q ss_pred EEEEEcCccCCCCCCcceEeecCCCCceeeccc-c-cccceEEeccc-ccccCCCccceEEEEeCCCCceEEccCCCccc
Q psy10286 423 HIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEE-E-TLSNAVISTKS-CLTKAGDSLSTVEVFDPLVGRWQMAEAMSMLR 499 (748)
Q Consensus 423 ~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~-~-~~~~~~~~~~~-~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r 499 (748)
.+|+.|+.+ ..+..||..+++-...-. . ......+..++ .++..+..-..+..+|..+++....-....
T Consensus 3 ~l~vs~~~d------~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-- 74 (391)
T 1l0q_A 3 FAYIANSES------DNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-- 74 (391)
T ss_dssp EEEEEETTT------TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--
T ss_pred EEEEEcCCC------CEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC--
Confidence 567776642 358888887776543211 1 11122233333 233443344679999998887644332222
Q ss_pred ceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CC-EEEEEeCCCCCCCCceEEE
Q psy10286 500 SRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-ND-KLYVCGGYDGVSSLNTVEC 575 (748)
Q Consensus 500 ~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~ 575 (748)
.-.+++.. ++.||+.|..+ ..+.+||+.+++....-... ....+++.. ++ .+|+.++.+ ..+..
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~-----~~v~~ 142 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNGD-----KTVSV 142 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTT-----TEEEE
T ss_pred CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCEEEEEeCCC-----CEEEE
Confidence 22233333 44577765432 47999999988754432222 222334433 34 577777643 47999
Q ss_pred EeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CC-E
Q psy10286 576 YEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NN-K 651 (748)
Q Consensus 576 yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~ 651 (748)
||+.+.+....-... ..-..++.. +..+|+.++.+ ..+..||+.+.+....-.. .....+++.. ++ .
T Consensus 143 ~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 143 INTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTK 213 (391)
T ss_dssp EETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEEC--SSEEEEEEECTTSSE
T ss_pred EECCCCcEEEEEecC--CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEec--CCCccceEECCCCCE
Confidence 999888765443222 111233333 44677776653 4699999988765443221 1111222222 34 4
Q ss_pred EEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 652 IYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 652 i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
+|+.+. +. ....+.+||+.+.+-... ++....-.++... +..||+.++.+ ..+.+||..+++-.
T Consensus 214 l~~~~~-~~--~~~~v~~~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~~s~~~d-----~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 214 AYVTNV-DK--YFNTVSMIDTGTNKITAR--IPVGPDPAGIAVTPDGKKVYVALSFX-----NTVSVIDTATNTIT 279 (391)
T ss_dssp EEEEEE-CS--SCCEEEEEETTTTEEEEE--EECCSSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEE
T ss_pred EEEEec-Cc--CCCcEEEEECCCCeEEEE--EecCCCccEEEEccCCCEEEEEcCCC-----CEEEEEECCCCcEE
Confidence 555442 11 136899999987754332 2222222233333 34677776543 46899999876543
No 58
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.08 E-value=3.2e-06 Score=69.36 Aligned_cols=80 Identities=21% Similarity=0.305 Sum_probs=62.3
Q ss_pred EEEEE-CCeEEeeeeeeeeccCHHHHHhhccc--ccccccceeeeecchheehhhccccccccccccccccccceeeeec
Q psy10286 77 VTIKV-DDQSFTCHRIVLAATIPYFQAMFTSD--MAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQ 153 (748)
Q Consensus 77 v~i~~-~~~~~~aHk~iL~a~S~~F~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 153 (748)
|+|+. +|++|.++|.+ |..|.+++.||... +.|.... .|.++
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~----------------------------------~Ipl~ 47 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETN----------------------------------EVNFR 47 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------C----------------------------------EEECS
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCC----------------------------------ceeCC
Confidence 56665 89999999997 78999999999752 2233333 34459
Q ss_pred CCCHHHHHHHHHhhhcee-----------EEeechhHHHHHHHHHHhcc
Q psy10286 154 GIDAVAMEALINFVYSGR-----------VTIHSQNVQSLMVVASFLQM 191 (748)
Q Consensus 154 ~~~~~~~~~~l~flYtg~-----------~~i~~~~v~~ll~~A~~l~i 191 (748)
+|+..+++.+++|+|.-. ..++.+.+.+|+.||++|++
T Consensus 48 ~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 48 EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCTTTHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHccccCCCcccCCCcccCHHHHHHHHHHHHHhCc
Confidence 999999999999998754 35788899999999999985
No 59
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.07 E-value=4.7e-07 Score=79.59 Aligned_cols=49 Identities=31% Similarity=0.683 Sum_probs=45.0
Q ss_pred hhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhh
Q psy10286 219 SCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKK 267 (748)
Q Consensus 219 ~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~ 267 (748)
+...++.+++|+|+|.+.+..+++.+|+.+|++|+++.|++.|++||.+
T Consensus 77 ~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 77 NPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 3456777999999999999999999999999999999999999999974
No 60
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.05 E-value=0.0004 Score=67.89 Aligned_cols=195 Identities=12% Similarity=0.062 Sum_probs=124.6
Q ss_pred eEEccCCCcccce--eEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCC
Q psy10286 489 WQMAEAMSMLRSR--VGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDG 566 (748)
Q Consensus 489 W~~~~~~~~~r~~--~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~ 566 (748)
++.+...|..+.. .++...++.+|+..|..+ .+.+.++|+.+++=...-+++..-.+.+++..+++||+....
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~-- 105 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK-- 105 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS--
T ss_pred eEEEEEecCCCCcccceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee--
Confidence 3344444443333 555666899999998654 247899999999866555666555667788889999999653
Q ss_pred CCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCC---CCCCcc-
Q psy10286 567 VSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPM---LTKRCR- 642 (748)
Q Consensus 567 ~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~- 642 (748)
-+.+++||+.+.+-.. .++.+-.+.+++.-++.+|+.-| .+.++.+||++.+-..--+. +.+...
T Consensus 106 ---~~~v~v~D~~t~~~~~--ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 106 ---NGLGFVWNIRNLRQVR--SFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPEL 174 (262)
T ss_dssp ---SSEEEEEETTTCCEEE--EEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCE
T ss_pred ---CCEEEEEECccCcEEE--EEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCcccccc
Confidence 3689999998876432 23333455677766778888765 25799999998764332111 111111
Q ss_pred eeEEEECCEEEEEeccCCCccccEEEEEeCCCCc---EEEccCCCC------CC--cceEEEEE--CCEEEEEeC
Q psy10286 643 LGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE---WKMIASMNV------MR--SRVALVAN--MGKLWAIGG 704 (748)
Q Consensus 643 ~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~------~r--~~~~~~~~--~~~l~v~GG 704 (748)
-.+...+++||+-- + ..+.|.+.|+++.+ |..++.+.. +. .-.+.+.. ++++||.|-
T Consensus 175 NELe~~~G~lyan~-w----~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 175 NELEWVDGEIFANV-W----QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEEETTEEEEEE-T----TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ceeEEECCEEEEEE-c----cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 12445589988643 2 24789999999986 444443321 11 12344444 588999985
No 61
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=97.98 E-value=3.2e-07 Score=82.46 Aligned_cols=47 Identities=21% Similarity=0.611 Sum_probs=43.2
Q ss_pred hhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHH
Q psy10286 219 SCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFL 265 (748)
Q Consensus 219 ~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l 265 (748)
+...++.+++|+|+|.+.+..+|+.+|+.+|++|+++.|++.|++||
T Consensus 97 ~~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 97 SVMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CHHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 34567779999999999999999999999999999999999999886
No 62
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.95 E-value=0.00098 Score=64.58 Aligned_cols=157 Identities=16% Similarity=0.081 Sum_probs=111.7
Q ss_pred ceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECC
Q psy10286 547 SAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPK 626 (748)
Q Consensus 547 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 626 (748)
+-++....++.+|+..|..+. +.+..+|+.+++=...-+++...++.+++..+++||+.... .+.+++||+.
T Consensus 22 ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~-----~~~v~v~D~~ 93 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR-----NHEGFVYDLA 93 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEETT
T ss_pred ccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee-----CCEEEEEECC
Confidence 334777789999999986543 57889999999877766777777778889999999999765 4589999998
Q ss_pred CCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEE-c--cCCCCCCcc-eEEEEECCEEEEE
Q psy10286 627 TDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-I--ASMNVMRSR-VALVANMGKLWAI 702 (748)
Q Consensus 627 ~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~p~~r~~-~~~~~~~~~l~v~ 702 (748)
+.+-. ...+.+..+.+++.-++++|+.-| .+.++.+|+++.+-.. + +.-+.+... --+...+++||+-
T Consensus 94 tl~~~--~ti~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyan 165 (243)
T 3mbr_X 94 TLTPR--ARFRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLAN 165 (243)
T ss_dssp TTEEE--EEEECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcEE--EEEeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEE
Confidence 86543 334444566777766788888866 3689999999976432 2 222222111 2344568998854
Q ss_pred eCCCCCCCCCeEEEEeCCCCce
Q psy10286 703 GGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~~~W 724 (748)
-- ..++|.+.||++++=
T Consensus 166 vw-----~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 166 VW-----LTSRIARIDPASGKV 182 (243)
T ss_dssp ET-----TTTEEEEECTTTCBE
T ss_pred EC-----CCCeEEEEECCCCCE
Confidence 31 235899999999753
No 63
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.93 E-value=1.3e-05 Score=73.47 Aligned_cols=99 Identities=10% Similarity=0.287 Sum_probs=73.8
Q ss_pred cEEEEE-CCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccccccccccccccccceeeeecC
Q psy10286 76 DVTIKV-DDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQG 154 (748)
Q Consensus 76 Dv~i~~-~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 154 (748)
-|+|+. +|+.|.+++.+ |..|..++.|+...-.+.. .+.....|.+++
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~------------------------------~~~~~~~Iplpn 56 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDD------------------------------EDDDEIVMPVPN 56 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------------------------------------CEEECTT
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccc------------------------------cccCCCceeeCC
Confidence 566765 78999999998 6789999999975321100 001113455599
Q ss_pred CCHHHHHHHHHhhhcee-------------------------EEeechhHHHHHHHHHHhcchhHHHHHHHHhhhc
Q psy10286 155 IDAVAMEALINFVYSGR-------------------------VTIHSQNVQSLMVVASFLQMQKVADACADFLKKR 205 (748)
Q Consensus 155 ~~~~~~~~~l~flYtg~-------------------------~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~ 205 (748)
|+..+++.+++|++.-. +.++.+.+.+|+.||++|+|+.|.+.|+..+...
T Consensus 57 V~s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ 132 (169)
T 3v7d_A 57 VRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEM 132 (169)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 99999999999998632 2356678999999999999999999999998664
No 64
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=97.92 E-value=1.1e-06 Score=75.84 Aligned_cols=47 Identities=23% Similarity=0.542 Sum_probs=43.8
Q ss_pred hhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHh
Q psy10286 220 CRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLK 266 (748)
Q Consensus 220 ~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~ 266 (748)
...++.+++|+|+|.+.+..+|+.+++.+|++|+++.|++.|++||.
T Consensus 69 ~~~f~~ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 69 ADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 35677799999999999999999999999999999999999999985
No 65
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.91 E-value=8.2e-07 Score=77.58 Aligned_cols=47 Identities=30% Similarity=0.700 Sum_probs=42.3
Q ss_pred hhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHh
Q psy10286 220 CRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLK 266 (748)
Q Consensus 220 ~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~ 266 (748)
...++.+++|+|+|.+.+..+|+.+++.+|++|+++.|++.|++||.
T Consensus 77 ~~~f~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 77 VKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 34566799999999999999999999999999999999999998874
No 66
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.88 E-value=0.014 Score=58.51 Aligned_cols=262 Identities=8% Similarity=-0.001 Sum_probs=138.8
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeeccc---ccccceEE-ecccccccCCCccceEEEEeCCCCceEEccCCC
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEE---ETLSNAVI-STKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMS 496 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~---~~~~~~~~-~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~ 496 (748)
++.+|+.... -..+..||+. +.+..... ......++ ..++.++........+..||+. +++.... ++
T Consensus 25 ~g~l~v~~~~------~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~ 95 (299)
T 2z2n_A 25 KGKVWITQHK------ANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYT-LP 95 (299)
T ss_dssp TSCEEEEETT------TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE-CS
T ss_pred CCCEEEEecC------CCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEe-CC
Confidence 4567765321 1357888887 76665431 11122222 2344444443334568899986 5554443 22
Q ss_pred -cccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceE
Q psy10286 497 -MLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTV 573 (748)
Q Consensus 497 -~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 573 (748)
....-++++.. ++.+|+.+.. ...+.+||+ +++..............+++.. +|++|+.... ...+
T Consensus 96 ~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i 164 (299)
T 2z2n_A 96 NPDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ-----NNAI 164 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEE
T ss_pred CcCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC-----CCEE
Confidence 12223344444 5789987532 246899999 6665544321122223344443 6789986531 2578
Q ss_pred EEEeCCCCeEEEccCCCCCCc-ceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcc-eeEEEE-C
Q psy10286 574 ECYEPDKDQWRIVKSMQKHRS-AGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCR-LGVAAL-N 649 (748)
Q Consensus 574 ~~yd~~~~~W~~~~~~~~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~ 649 (748)
++||+ +++..... .+.... -.+++.. ++.+|+.... .+.+.+||+ ++++.... .+..... .+++.- +
T Consensus 165 ~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 165 GRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFK-IPTPNARPHAITAGAG 235 (299)
T ss_dssp EEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECST
T ss_pred EEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEE-CCCCCCCceeEEECCC
Confidence 99999 77766542 121111 1233333 5778887543 247999999 77776542 2212222 233332 5
Q ss_pred CEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 650 NKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 650 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
+.+|+.... .+.+.+||+ +.+...+........-.+++.-+++||+... .+.+.+||+++++
T Consensus 236 g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~g~l~v~~~------~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 236 IDLWFTEWG-----ANKIGRLTS-NNIIEEYPIQIKSAEPHGICFDGETIWFAME------CDKIGKLTLIKDN 297 (299)
T ss_dssp TCEEEEETT-----TTEEEEEET-TTEEEEEECSSSSCCEEEEEECSSCEEEEET------TTEEEEEEEC---
T ss_pred CCEEEeccC-----CceEEEECC-CCceEEEeCCCCCCccceEEecCCCEEEEec------CCcEEEEEcCccc
Confidence 678887522 257899998 4555444211111122333335678888753 1468999987764
No 67
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.83 E-value=0.0057 Score=60.41 Aligned_cols=194 Identities=13% Similarity=0.125 Sum_probs=121.6
Q ss_pred eEEEEEC-CEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCC
Q psy10286 502 VGVAVMK-NRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDK 580 (748)
Q Consensus 502 ~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 580 (748)
++++..+ +.+|+..|..+ .+.+.++|+.+++=...-+++....+.+.+..++++|+..-. -+.+++||+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-----~~~v~viD~~t 95 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-----KNIGFIYDRRT 95 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----CSEEEEEETTT
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----CCEEEEEECCC
Confidence 5666665 89999877422 367999999999865544455545666778889999998653 36899999987
Q ss_pred CeEEEccCCCCC-CcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEE-cc--CCCCCC-cceeEEEECCEEEEE
Q psy10286 581 DQWRIVKSMQKH-RSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTS-VK--PMLTKR-CRLGVAALNNKIYVC 655 (748)
Q Consensus 581 ~~W~~~~~~~~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~--~~p~~r-~~~~~~~~~~~i~v~ 655 (748)
.+= +..++.+ ..+.+.+.-++++|+..| .+.+..+|+++.+-.. +. ..+.+. .-..+...++++|+-
T Consensus 96 ~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn 167 (266)
T 2iwa_A 96 LSN--IKNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWAN 167 (266)
T ss_dssp TEE--EEEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred CcE--EEEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEe
Confidence 653 2222222 334455555778998765 3689999999876432 22 111111 112344448888876
Q ss_pred eccCCCccccEEEEEeCCCCc---EEEccCCC-----C--C--CcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 656 GGYDGAIFLQSVEMYDPITDE---WKMIASMN-----V--M--RSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 656 GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p-----~--~--r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
-.. .++|.+.|+.+.+ |..++.+. . + -.-.+++.. ++++||.|+.. +.+++.+..+
T Consensus 168 ~~~-----~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~-----~~v~~i~l~~ 237 (266)
T 2iwa_A 168 IWQ-----TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW-----PKLFEIKLHL 237 (266)
T ss_dssp ETT-----SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC-----SEEEEEEEEE
T ss_pred cCC-----CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC-----CeEEEEEEec
Confidence 432 4689999999875 44443210 0 0 112445544 57899999843 5677776544
No 68
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.75 E-value=0.028 Score=57.89 Aligned_cols=219 Identities=12% Similarity=0.074 Sum_probs=116.9
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCC--------c
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFK--------R 546 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~--------r 546 (748)
..++.+|+.+++....-+... .-++++.. ++.+|+.++.+ ..++.||+.+.+-...-+.+.. .
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 141 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPL 141 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESS--CCCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEESCCCCCCSSCCCC
T ss_pred ccEEEEcCCCCeEEEEEecCC--CcceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCCccccccCCC
Confidence 467788887776433222111 11223333 34688876632 4799999988764332222111 1
Q ss_pred ceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEE
Q psy10286 547 SAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVER 622 (748)
Q Consensus 547 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 622 (748)
.-++++.. ++.+|+.+... -..++.||+.+.+-...-+... ..-+.++.. ++.+|+... ...+..
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~------~~~i~~ 210 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNTG-KMSTGLALDSEGKRLYTTNA------DGELIT 210 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCCC-TTCCCCEEETTTTEEEEECT------TSEEEE
T ss_pred CCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCCC-CccceEEECCCCCEEEEEcC------CCeEEE
Confidence 12334443 45688776311 2469999998876443322111 112223332 456776654 247889
Q ss_pred EECCCCcEEEccCCCC--CCcc-eeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--
Q psy10286 623 YDPKTDEWTSVKPMLT--KRCR-LGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-- 695 (748)
Q Consensus 623 yd~~~~~W~~~~~~p~--~r~~-~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 695 (748)
||+.+.+-...-..+. +... .+++.. ++.+|+.+.. .+.+++||+.+.+....-..+.+ ..++..
T Consensus 211 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~~---~~~~~s~d 282 (353)
T 3vgz_A 211 IDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKVAAPES---LAVLFNPA 282 (353)
T ss_dssp EETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEEECSSC---CCEEEETT
T ss_pred EECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCC---ceEEECCC
Confidence 9998876443222211 1222 223333 4567776532 36899999988776543333333 122222
Q ss_pred CCEEEEEeCCCCCCCCCeEEEEeCCCCceEe
Q psy10286 696 MGKLWAIGGYDGVSNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 696 ~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (748)
++.+|+.++.+ ..+.+||..+++...
T Consensus 283 g~~l~v~~~~~-----~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 283 RNEAYVTHRQA-----GKVSVIDAKSYKVVK 308 (353)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred CCEEEEEECCC-----CeEEEEECCCCeEEE
Confidence 45688876432 479999998876543
No 69
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.74 E-value=0.00099 Score=65.13 Aligned_cols=156 Identities=12% Similarity=0.083 Sum_probs=106.4
Q ss_pred eEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCC
Q psy10286 549 VGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTD 628 (748)
Q Consensus 549 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 628 (748)
.+....++.+|+..|..+. +.+..+|+.+++=...-+++..-++.+++..+++||+.... .+.+++||+++.
T Consensus 46 qGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~-----~~~v~v~D~~t~ 117 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK-----NGLGFVWNIRNL 117 (262)
T ss_dssp EEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEETTTC
T ss_pred ceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee-----CCEEEEEECccC
Confidence 5666668999999886542 47889999999866655666656667788899999999765 358999999887
Q ss_pred cEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEE-ccC--CCCCCcce-EEEEECCEEEEEeC
Q psy10286 629 EWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-IAS--MNVMRSRV-ALVANMGKLWAIGG 704 (748)
Q Consensus 629 ~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-~~~--~p~~r~~~-~~~~~~~~l~v~GG 704 (748)
+-.. ..+.+..+.+.+.-++++|+.-| .+.++.+|+++.+-.. +.. -+.+.... -+...+|+||+--
T Consensus 118 ~~~~--ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~- 188 (262)
T 3nol_A 118 RQVR--SFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV- 188 (262)
T ss_dssp CEEE--EEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE-
T ss_pred cEEE--EEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE-
Confidence 6433 33334455666666777888765 3689999999876433 221 11111111 2344589998642
Q ss_pred CCCCCCCCeEEEEeCCCCceE
Q psy10286 705 YDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~~W~ 725 (748)
+ ..++|.+.||++++=.
T Consensus 189 w----~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 189 W----QTNKIVRIDPETGKVT 205 (262)
T ss_dssp T----TSSEEEEECTTTCBEE
T ss_pred c----cCCeEEEEECCCCcEE
Confidence 1 2358999999998643
No 70
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=97.72 E-value=9.1e-06 Score=82.15 Aligned_cols=89 Identities=26% Similarity=0.550 Sum_probs=69.1
Q ss_pred eehhhccccccccccccccccccceeeeecCCCHH-HHHHHHHhhhceeEEeechhHHHHHHHHHHhcchhHHHHHHHHh
Q psy10286 124 VIVLAATIPYFQAMFTSDMAESKQREITMQGIDAV-AMEALINFVYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFL 202 (748)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~l~flYtg~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l 202 (748)
+.++++.||||++||.+++.|+.+.+|.+++++.. .+
T Consensus 51 r~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v------------------------------------------ 88 (279)
T 3i3n_A 51 RSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGP------------------------------------------ 88 (279)
T ss_dssp HHHHHHHCTTSGGGCCC--------EEECCCCSSTTCS------------------------------------------
T ss_pred HHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCC------------------------------------------
Confidence 48899999999999999999999988888866421 11
Q ss_pred hhcccCCcccchhhhhhhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCC
Q psy10286 203 KKRFHPNNVLDYYVLFSCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFH 270 (748)
Q Consensus 203 ~~~l~~~ncl~i~~~~~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~ 270 (748)
+...++.+++|+|+|.+.+..+|+.+++.+|++|+++.|++.|++||.+.++
T Consensus 89 ----------------~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~ 140 (279)
T 3i3n_A 89 ----------------EPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLH 140 (279)
T ss_dssp ----------------CHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred ----------------CHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCC
Confidence 2245667999999999999999999999999999999999999999987654
No 71
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.70 E-value=0.048 Score=54.46 Aligned_cols=219 Identities=8% Similarity=0.018 Sum_probs=119.7
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL- 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~- 554 (748)
..+..||+. +++...........-++++.. ++.+|+.... ...+.+||+. +++...........-++++..
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~ 108 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA-----ANKIGRITKK-GIIKEYTLPNPDSAPYGITEGP 108 (299)
T ss_dssp TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECT
T ss_pred CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC-----CCeEEEECCC-CcEEEEeCCCcCCCceeeEECC
Confidence 568899988 777654321112222334432 6788887542 2368899986 455444311122233444444
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEc
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSV 633 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 633 (748)
++++|+.+.. -..+.+||+ +++............-.+++.. ++.+|+.... ...+++||+ +.+....
T Consensus 109 ~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~ 176 (299)
T 2z2n_A 109 NGDIWFTEMN-----GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEF 176 (299)
T ss_dssp TSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEE
T ss_pred CCCEEEEecC-----CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEe
Confidence 6789987542 247889999 6655544221111222333333 6788886532 247999999 7777654
Q ss_pred cCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcc-eEEEEE-CCEEEEEeCCCCCCC
Q psy10286 634 KPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSR-VALVAN-MGKLWAIGGYDGVSN 710 (748)
Q Consensus 634 ~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~l~v~GG~~~~~~ 710 (748)
........-.+++.- ++.+|+.... .+.+.+||+ +.++..+. .+..... .+++.. ++++|+....
T Consensus 177 ~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~----- 244 (299)
T 2z2n_A 177 KIPTPASGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFK-IPTPNARPHAITAGAGIDLWFTEWG----- 244 (299)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETT-----
T ss_pred eCCCCCCcceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEE-CCCCCCCceeEEECCCCCEEEeccC-----
Confidence 211111112233333 5678887532 257899999 77776642 2212222 233332 5788887521
Q ss_pred CCeEEEEeCCCCceEec
Q psy10286 711 LPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 711 ~~~v~~yd~~~~~W~~~ 727 (748)
...+.+||+ +++...+
T Consensus 245 ~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 245 ANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp TTEEEEEET-TTEEEEE
T ss_pred CceEEEECC-CCceEEE
Confidence 246899998 4554443
No 72
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=97.68 E-value=2e-06 Score=75.20 Aligned_cols=46 Identities=30% Similarity=0.735 Sum_probs=41.2
Q ss_pred hhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHH
Q psy10286 220 CRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFL 265 (748)
Q Consensus 220 ~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l 265 (748)
...++.+++|+|+|.+.+..+|+.+++.+|++|+++.|++.|++||
T Consensus 80 ~~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 80 ARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 4566779999999999999999999999999999999998887653
No 73
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=97.67 E-value=3.6e-05 Score=66.47 Aligned_cols=49 Identities=27% Similarity=0.609 Sum_probs=45.9
Q ss_pred hhhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHh
Q psy10286 218 FSCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLK 266 (748)
Q Consensus 218 ~~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~ 266 (748)
.+...++.+++|+|+|.+.+..+|+.+++.+|++|+++.|++.|++||.
T Consensus 69 ~~~~~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 69 SNAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 4567889999999999999999999999999999999999999999986
No 74
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.67 E-value=0.0038 Score=60.99 Aligned_cols=179 Identities=12% Similarity=0.076 Sum_probs=115.7
Q ss_pred eEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCC
Q psy10286 502 VGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKD 581 (748)
Q Consensus 502 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 581 (748)
.++...++.+|+..|..+ .+.++|+.+++=...- ++..-.+.+++..+++||+....+ +.+++||+.+.
T Consensus 58 qGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~D~~Tl 126 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-----GLLFTWSGMPP 126 (268)
T ss_dssp EEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-----CEEEEEETTTT
T ss_pred ceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-----CEEEEEECCcC
Confidence 566667999999998653 3889999988643323 555455667888899999986533 68999999887
Q ss_pred eEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEc-c--CCCCCC-cceeEEEECCEEEEEec
Q psy10286 582 QWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSV-K--PMLTKR-CRLGVAALNNKIYVCGG 657 (748)
Q Consensus 582 ~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~--~~p~~r-~~~~~~~~~~~i~v~GG 657 (748)
+-.. ..+.+..+.+++.-++++|+.-|. +.++.+||++.+-..- . .-+.+. ..-.+...+|+||+--
T Consensus 127 ~~~~--ti~~~~eGwGLt~Dg~~L~vSdGs------~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv- 197 (268)
T 3nok_A 127 QRER--TTRYSGEGWGLCYWNGKLVRSDGG------TMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI- 197 (268)
T ss_dssp EEEE--EEECSSCCCCEEEETTEEEEECSS------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE-
T ss_pred cEEE--EEeCCCceeEEecCCCEEEEECCC------CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE-
Confidence 6432 223334566777778899998763 5899999999765432 1 111111 1122444588988543
Q ss_pred cCCCccccEEEEEeCCCCc---EEEccCCC-------CCC--cceEEEEE--CCEEEEEeC
Q psy10286 658 YDGAIFLQSVEMYDPITDE---WKMIASMN-------VMR--SRVALVAN--MGKLWAIGG 704 (748)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~---W~~~~~~p-------~~r--~~~~~~~~--~~~l~v~GG 704 (748)
+ ..+.|.+.|+++.+ |..++.+. ... .--+++.. ++++||.|-
T Consensus 198 w----~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 198 W----HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp T----TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred C----CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 2 24689999999986 44444221 111 11233333 578999875
No 75
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.66 E-value=0.0016 Score=68.79 Aligned_cols=216 Identities=17% Similarity=0.203 Sum_probs=118.2
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEE
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAA 553 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~ 553 (748)
-..+..+|..+++-...-... ..-.+++.. +..+|+.|+.+ ..+..||+.+++....-..+. .-.+++.
T Consensus 11 d~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~~--~v~~~~~ 81 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIATVPAGS--SPQGVAV 81 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEEEEECSS--SEEEEEE
T ss_pred CCEEEEEECCCCeEEEEeecC--CCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEEEEECCC--CccceEE
Confidence 357889999887654322211 112333333 34677877643 478999999887654333222 2233333
Q ss_pred E-C-CEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCc
Q psy10286 554 L-N-DKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDE 629 (748)
Q Consensus 554 ~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 629 (748)
. + ..+|+.|..+ ..+.+||+.+++....-... ..-.+++.. +..+|+.++.+ ..+..||+.+.+
T Consensus 82 spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~ 149 (391)
T 1l0q_A 82 SPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKA 149 (391)
T ss_dssp CTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTE
T ss_pred CCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCc
Confidence 3 3 4576666532 57999999988754432221 122333333 34677777653 479999998887
Q ss_pred EEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CC-EEEEEeCC
Q psy10286 630 WTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MG-KLWAIGGY 705 (748)
Q Consensus 630 W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~l~v~GG~ 705 (748)
....-.. ......++.. ++.+|+.++.+ ..+.+||+.+.+....-.. ...-.+++.. ++ .+++.+.
T Consensus 150 ~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~- 219 (391)
T 1l0q_A 150 VINTVSV--GRSPKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTKAYVTNV- 219 (391)
T ss_dssp EEEEEEC--CSSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEEC--SSEEEEEEECTTSSEEEEEEE-
T ss_pred EEEEEec--CCCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEec--CCCccceEECCCCCEEEEEec-
Confidence 6543222 1222233332 34677776543 4799999988765443221 1122222222 44 4555442
Q ss_pred CCCCCCCeEEEEeCCCCce
Q psy10286 706 DGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 706 ~~~~~~~~v~~yd~~~~~W 724 (748)
+. ....+.+||+.+++-
T Consensus 220 ~~--~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 220 DK--YFNTVSMIDTGTNKI 236 (391)
T ss_dssp CS--SCCEEEEEETTTTEE
T ss_pred Cc--CCCcEEEEECCCCeE
Confidence 11 124789999887653
No 76
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.66 E-value=0.04 Score=55.09 Aligned_cols=258 Identities=9% Similarity=0.040 Sum_probs=136.9
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeecccc---cccceEE-ecccccccCCCccceEEEEeCCCCceEEccCCC
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEE---TLSNAVI-STKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMS 496 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~---~~~~~~~-~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~ 496 (748)
++.+|+.... ...+.+||+. +++...... .....+. ..++.++........+..||+. +++.......
T Consensus 30 ~g~l~v~~~~------~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~ 101 (300)
T 2qc5_A 30 DGKVWFTQHK------ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQ 101 (300)
T ss_dssp TSCEEEEETT------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSS
T ss_pred CCCEEEEcCC------CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCC
Confidence 4567776432 1357788887 666543211 1122222 2334444443334578999988 7765443211
Q ss_pred cccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCC-CCcceeEEEEE-CCEEEEEeCCCCCCCCceE
Q psy10286 497 MLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC-FKRSAVGAAAL-NDKLYVCGGYDGVSSLNTV 573 (748)
Q Consensus 497 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 573 (748)
....-++++.. ++.+|+.+.. ...+.+||+. .+..... ++ ....-.+++.. ++++|+.... ...+
T Consensus 102 ~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i 169 (300)
T 2qc5_A 102 PDSGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ-----NNSI 169 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEE
T ss_pred CCCCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC-----CCeE
Confidence 12223344443 6788887532 2468899988 6555432 22 12223344443 6788886532 2478
Q ss_pred EEEeCCCCeEEEccCCCCCCcc-eEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcc-eeEEEE-C
Q psy10286 574 ECYEPDKDQWRIVKSMQKHRSA-GGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCR-LGVAAL-N 649 (748)
Q Consensus 574 ~~yd~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~ 649 (748)
++||+ ++++.... .+..... .+++.. ++.+|+.... ...+.+||+ +.++.... .+..... .+++.- +
T Consensus 170 ~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~ 240 (300)
T 2qc5_A 170 GRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEIM-----GNKIGRITT-TGEISEYD-IPTPNARPHAITAGKN 240 (300)
T ss_dssp EEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECST
T ss_pred EEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEccC-----CCEEEEEcC-CCcEEEEE-CCCCCCCceEEEECCC
Confidence 99998 66665542 2222122 233332 5788886543 246899998 66665542 1211222 233332 5
Q ss_pred CEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCC
Q psy10286 650 NKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPS 720 (748)
Q Consensus 650 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~ 720 (748)
+.||+.... .+.+.+||+ +.+............-.+++.. +|+||+.+. . .+.+|||+
T Consensus 241 g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~------~-~i~~~~p~ 299 (300)
T 2qc5_A 241 SEIWFTEWG-----ANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK------C-KIGKLNLN 299 (300)
T ss_dssp TCEEEEETT-----TTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS------S-EEEEEEEC
T ss_pred CCEEEeccC-----CCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc------C-ceEEeCCC
Confidence 678887632 257899998 4566554211111112333333 577777642 1 68888875
No 77
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.64 E-value=0.016 Score=61.81 Aligned_cols=266 Identities=13% Similarity=0.030 Sum_probs=137.0
Q ss_pred ceEeecCCCCceeecccccc----cceEEecccccccCCCccceEEEEeCCCCceEEccCCC---cccceeEEEEE--CC
Q psy10286 439 TVEVFDPLVGRWQMAEEETL----SNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMS---MLRSRVGVAVM--KN 509 (748)
Q Consensus 439 ~~~~y~~~~~~W~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~---~~r~~~~~~~~--~~ 509 (748)
.++.+|+.++++..+..... ....+..++.+...+..-..+..+|..+++........ ........+.. ++
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~ 181 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN 181 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCC
Confidence 67888887766554432111 12223334444444444456999999988876543332 11222222333 77
Q ss_pred EEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc
Q psy10286 510 RLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK 587 (748)
Q Consensus 510 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 587 (748)
.+|+.|+.+ ..+.+||+.+.+....-.. ....-.+++.. ++.+|+.|+.+ ..+..||+.+.+....-
T Consensus 182 ~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~~~~~~ 250 (433)
T 3bws_A 182 ELWVSQMQA-----NAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKLEIRKT 250 (433)
T ss_dssp EEEEEEGGG-----TEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEEEC
T ss_pred EEEEEECCC-----CEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCcEEEEe
Confidence 888888743 4789999988654322111 11122233333 44677776543 47899999888764432
Q ss_pred CCCCCCcceEEEEE-CCEEEEEccCCCCc---ccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCC
Q psy10286 588 SMQKHRSAGGVIAF-DSYVYALGGHDGLS---IFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGA 661 (748)
Q Consensus 588 ~~~~~r~~~~~~~~-~~~iyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 661 (748)
+. ...-.+++.. ++..+++++..... .-..+..||+.+.+-......+. ...+++.. ++.+|+.++.+
T Consensus 251 ~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~-- 324 (433)
T 3bws_A 251 DK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYVSDMCC-- 324 (433)
T ss_dssp CC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEEEETTT--
T ss_pred cC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEEEecCC--
Confidence 22 2222233332 44344444432111 12478999998876443321111 11122222 34688887643
Q ss_pred ccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCE-EEEEeCCCCC---------CCCCeEEEEeCCCCceEe
Q psy10286 662 IFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGK-LWAIGGYDGV---------SNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 662 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-l~v~GG~~~~---------~~~~~v~~yd~~~~~W~~ 726 (748)
..+.+||..+.+-... ++....-.+++.. +++ +|+.+...+. .....+++||+.+++...
T Consensus 325 ---~~v~v~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 325 ---SKIEVYDLKEKKVQKS--IPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp ---TEEEEEETTTTEEEEE--EECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred ---CEEEEEECCCCcEEEE--ecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 4789999987654332 2222222233333 454 5544432110 012379999998876543
No 78
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.63 E-value=0.0089 Score=63.89 Aligned_cols=271 Identities=12% Similarity=0.039 Sum_probs=137.0
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeecccc--------cccceEEecccccccCCCccceEEEEeCCCCceEEc
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEE--------TLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMA 492 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~--------~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~ 492 (748)
++.+++.|+.+ ..+..||..+++....... .+....+..++.....+..-..+..||..+++....
T Consensus 133 ~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~ 206 (433)
T 3bws_A 133 NTRLAIPLLED------EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT 206 (433)
T ss_dssp SSEEEEEBTTS------SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE
T ss_pred CCeEEEEeCCC------CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE
Confidence 56778777642 2588999988776643221 111112233444444444446789999987664322
Q ss_pred cCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCC-
Q psy10286 493 EAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVS- 568 (748)
Q Consensus 493 ~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~- 568 (748)
-.. ....-.+++.. ++.+|+.|+.+ ..+.+||+.+.+....-+. ...-.+++.. +++.+++++.....
T Consensus 207 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~ 278 (433)
T 3bws_A 207 VDL-TGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQ 278 (433)
T ss_dssp EEC-SSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTT
T ss_pred EcC-CCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECCCCcc
Confidence 111 11112233333 45677776533 3799999998876443222 2222333333 55444444432211
Q ss_pred --CCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCccee
Q psy10286 569 --SLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLG 644 (748)
Q Consensus 569 --~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 644 (748)
.-..+..||+.+.+-......+. .-..++.. ++.+|+.++.+ ..+..||+.+.+-... ++....-.+
T Consensus 279 ~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~~--~~~~~~~~~ 349 (433)
T 3bws_A 279 ESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQKS--IPVFDKPNT 349 (433)
T ss_dssp CSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEEE--EECSSSEEE
T ss_pred ccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEEE--ecCCCCCCe
Confidence 13578899998876433321111 11122222 34788887653 4799999987654332 222222223
Q ss_pred EEEE-CCEEEEEeccCCCc----------cccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCEEEEEeCCCCCCCCC
Q psy10286 645 VAAL-NNKIYVCGGYDGAI----------FLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGKLWAIGGYDGVSNLP 712 (748)
Q Consensus 645 ~~~~-~~~i~v~GG~~~~~----------~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~ 712 (748)
++.. +++.+++++..... .-..+++||..+.+....-.. ...-.+++.. +++.+++++.. ..
T Consensus 350 ~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~----d~ 423 (433)
T 3bws_A 350 IALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFL----DH 423 (433)
T ss_dssp EEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETT----TT
T ss_pred EEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECC----CC
Confidence 3333 45444444332211 124899999988765443211 1111222222 55555554421 13
Q ss_pred eEEEEeCC
Q psy10286 713 TVEVYDPS 720 (748)
Q Consensus 713 ~v~~yd~~ 720 (748)
.+.+|+.+
T Consensus 424 ~i~v~~~~ 431 (433)
T 3bws_A 424 QIRVYRRD 431 (433)
T ss_dssp EEEEEEET
T ss_pred eEEEEEec
Confidence 68888765
No 79
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=97.63 E-value=1.8e-05 Score=73.48 Aligned_cols=47 Identities=17% Similarity=0.369 Sum_probs=43.1
Q ss_pred hhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHh
Q psy10286 220 CRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLK 266 (748)
Q Consensus 220 ~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~ 266 (748)
...|+.+++|+|++.+.+..+++.+++.+|++|+++.|++.|+++|.
T Consensus 83 ~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 129 (172)
T 3htm_A 83 PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALC 129 (172)
T ss_dssp HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34567799999999999999999999999999999999999999985
No 80
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.60 E-value=0.029 Score=57.39 Aligned_cols=242 Identities=10% Similarity=0.044 Sum_probs=120.1
Q ss_pred ceEEEEeCC--CCceEEccCCCcccceeEEEEE-CC-EEEEEccCCCCCCCCeEEEEECCCC-eEEEccCCCCCcceeEE
Q psy10286 477 STVEVFDPL--VGRWQMAEAMSMLRSRVGVAVM-KN-RLYAFGGYNGSERLSTVEEFDPVRR-VWNKVSPMCFKRSAVGA 551 (748)
Q Consensus 477 ~~~~~yd~~--~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~t~-~W~~~~~~~~~r~~~~~ 551 (748)
..+..|+.. ++++..+..++....-..++.. ++ .+|+.+.. ...+..||.... ....+...+....-+++
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 134 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN-----AGNVSVTRLEDGLPVGVVDVVEGLDGCHSA 134 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT-----TTEEEEEEEETTEEEEEEEEECCCTTBCCC
T ss_pred CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC-----CCeEEEEECCCCccccccccccCCCCceEE
Confidence 566676665 7787766544322222333333 34 46665532 235777877322 22222222222222333
Q ss_pred EEE-CC-EEEEEeCCCCCCCCceEEEEeCCC-CeEEEcc----CCCCCCcceEEEEE-CC-EEEEEccCCCCcccCeEEE
Q psy10286 552 AAL-ND-KLYVCGGYDGVSSLNTVECYEPDK-DQWRIVK----SMQKHRSAGGVIAF-DS-YVYALGGHDGLSIFDSVER 622 (748)
Q Consensus 552 ~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~----~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~ 622 (748)
+.. ++ .+|+.+..+ ..+..||..+ .+..... ..+....-..++.. ++ .+|+.+.. .+.+..
T Consensus 135 ~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----~~~i~~ 204 (343)
T 1ri6_A 135 NISPDNRTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----NSSVDV 204 (343)
T ss_dssp EECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----TTEEEE
T ss_pred EECCCCCEEEEecCCC-----CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----CCEEEE
Confidence 333 34 677765322 4688899887 6665432 11111111122222 34 57777644 246888
Q ss_pred EECC--CCcEEE---ccCCCCC---CcceeEEEE--C-CEEEEEeccCCCccccEEEEEeCC--CCcEEEccCCCCCCcc
Q psy10286 623 YDPK--TDEWTS---VKPMLTK---RCRLGVAAL--N-NKIYVCGGYDGAIFLQSVEMYDPI--TDEWKMIASMNVMRSR 689 (748)
Q Consensus 623 yd~~--~~~W~~---~~~~p~~---r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~~r~~ 689 (748)
||.. +.++.. +...+.. ......+.+ + ..+|+.++. .+.+.+||.. +.+++.+...+....-
T Consensus 205 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~-----~~~i~v~d~~~~~~~~~~~~~~~~~~~~ 279 (343)
T 1ri6_A 205 WELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT-----ASLITVFSVSEDGSVLSKEGFQPTETQP 279 (343)
T ss_dssp EESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT-----TTEEEEEEECTTSCCEEEEEEEECSSSC
T ss_pred EEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC-----CCEEEEEEEcCCCCceEEeeeecCCCcc
Confidence 8874 444432 2223322 112222333 3 367666532 2468888877 5567766544433222
Q ss_pred eEEEEE-CC-EEEEEeCCCCCCCCCeEEE--EeCCCCceEecCCCCCCCcceEEEEee
Q psy10286 690 VALVAN-MG-KLWAIGGYDGVSNLPTVEV--YDPSTDSWAFVAPMCAHEGGVGVGVIP 743 (748)
Q Consensus 690 ~~~~~~-~~-~l~v~GG~~~~~~~~~v~~--yd~~~~~W~~~~~~~~~r~~~~~~~~~ 743 (748)
..++.. ++ .||+.++.+ ..+.+ +|+++++++.+..++....-.++++.+
T Consensus 280 ~~~~~s~dg~~l~~~~~~~-----~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~ 332 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAAGQKS-----HHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNA 332 (343)
T ss_dssp CCEEECTTSSEEEEECTTT-----CEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEE
T ss_pred ceEEECCCCCEEEEecCCC-----CeEEEEEEcCCCceeeEccccccCCCCeeEEEEc
Confidence 223332 44 455554322 24445 488899998887776654444555543
No 81
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=97.60 E-value=5.3e-05 Score=65.60 Aligned_cols=72 Identities=15% Similarity=0.438 Sum_probs=55.8
Q ss_pred HHHHHHHhhhcccCC-cccchhhhhhhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhh
Q psy10286 195 ADACADFLKKRFHPN-NVLDYYVLFSCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKK 267 (748)
Q Consensus 195 ~~~c~~~l~~~l~~~-ncl~i~~~~~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~ 267 (748)
...++.|+...+... +.+.+ .-.+...++.+++|+|+|.+.+..+|+.+++.+|++|+++.|++.|+++|.+
T Consensus 47 Laa~S~yF~~~f~~~~~~i~l-~~~~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 47 LACTSKMFEILFHRNSQHYTL-DFLSPKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp HHHHCHHHHHHTTSCCSEEEE-CSSCHHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HhhcCHHHHHHHcCCCcEEEe-CCCCHHHHHHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 344555665544332 22222 2245678899999999999999999999999999999999999999999975
No 82
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.59 E-value=0.014 Score=60.17 Aligned_cols=281 Identities=12% Similarity=0.087 Sum_probs=136.3
Q ss_pred EEcCccCCCCCCcceEeecCCCCceeeccc---cc-ccceEEecccccccCCC--ccceEEEEeCCCCceEEccCCCc-c
Q psy10286 426 AVGGLTKAGDSLSTVEVFDPLVGRWQMAEE---ET-LSNAVISTKSCLTKAGD--SLSTVEVFDPLVGRWQMAEAMSM-L 498 (748)
Q Consensus 426 v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~---~~-~~~~~~~~~~~~~~~g~--~~~~~~~yd~~~~~W~~~~~~~~-~ 498 (748)
.+|.+......--.++.+|+.++++..+.. .. .....+..++.++..+. ....++.||..+++++.+..... .
T Consensus 6 ~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~ 85 (347)
T 3hfq_A 6 LFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPG 85 (347)
T ss_dssp EEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEES
T ss_pred EEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCC
Confidence 345443333333467888888888866432 11 11223344444444332 13578999998888776654321 1
Q ss_pred cceeEEEEE-CC-EEEEEccCCCCCCCCeEEEEECC-CCeEEEccCC------CCCc----ceeEEEEE-CCEEEEEeCC
Q psy10286 499 RSRVGVAVM-KN-RLYAFGGYNGSERLSTVEEFDPV-RRVWNKVSPM------CFKR----SAVGAAAL-NDKLYVCGGY 564 (748)
Q Consensus 499 r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~-t~~W~~~~~~------~~~r----~~~~~~~~-~~~iyv~GG~ 564 (748)
..-..++.. ++ .+|+.+.. ...+..||.. +.+...+... |.+| ..++++.. +|++|+.+..
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~-----~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~ 160 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYH-----KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG 160 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETT-----TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT
T ss_pred CCCEEEEECCCCCEEEEEeCC-----CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC
Confidence 122233333 44 57766532 2357777764 3333332211 1111 12333333 6777776542
Q ss_pred CCCCCCceEEEEeCC-CCeEEEccC--CCCCCcceEEEEE-CC-EEEEEccCCCCcccCeEEEEECCCCcEEEcc---CC
Q psy10286 565 DGVSSLNTVECYEPD-KDQWRIVKS--MQKHRSAGGVIAF-DS-YVYALGGHDGLSIFDSVERYDPKTDEWTSVK---PM 636 (748)
Q Consensus 565 ~~~~~~~~~~~yd~~-~~~W~~~~~--~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~ 636 (748)
+ +.+..||.. +++...... .+....-..++.. ++ .+|+.+..++ .-.++.++..+.+++.+. ..
T Consensus 161 ~-----~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~---~v~v~~~~~~~g~~~~~~~~~~~ 232 (347)
T 3hfq_A 161 S-----DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS---QIASLKYDTQTGAFTQLGIVKTI 232 (347)
T ss_dssp T-----TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT---EEEEEEEETTTTEEEEEEEEESS
T ss_pred C-----CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC---EEEEEEecCCCCceEEeeeeeec
Confidence 2 478888887 555554432 1111111122222 45 5787654422 113444455467765543 22
Q ss_pred CCC---CcceeEEEE--CC-EEEEEeccCCCccccEEEEEeCCC-CcEEEccCCCCC-CcceEEEEE-CC-EEEEEeCCC
Q psy10286 637 LTK---RCRLGVAAL--NN-KIYVCGGYDGAIFLQSVEMYDPIT-DEWKMIASMNVM-RSRVALVAN-MG-KLWAIGGYD 706 (748)
Q Consensus 637 p~~---r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~-r~~~~~~~~-~~-~l~v~GG~~ 706 (748)
+.. ......+.+ ++ .||+.+.. .+.+.+||... .+++.+...+.. ..-..++.. ++ .||+.+..+
T Consensus 233 ~~~~~~~~~~~~i~~spdG~~l~v~~~~-----~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 233 PADYTAHNGAAAIRLSHDGHFLYVSNRG-----YNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp CTTCCSCCEEEEEEECTTSCEEEEEEET-----TTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTT
T ss_pred CCCCCCCCcceeEEECCCCCEEEEEeCC-----CCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCC
Confidence 221 112222333 44 57776542 25788888753 356655444431 112233332 45 466654422
Q ss_pred CCCCCCeEEEE--eCCCCceEecCC
Q psy10286 707 GVSNLPTVEVY--DPSTDSWAFVAP 729 (748)
Q Consensus 707 ~~~~~~~v~~y--d~~~~~W~~~~~ 729 (748)
..+.+| |+++++.+.+..
T Consensus 308 -----~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 308 -----DNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp -----TEEEEEEECTTTCCEEEEEE
T ss_pred -----CcEEEEEEeCCCCeEEeccc
Confidence 245666 888888776543
No 83
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.58 E-value=0.0086 Score=62.28 Aligned_cols=228 Identities=13% Similarity=0.111 Sum_probs=118.9
Q ss_pred cceEEEEeCCCCceEEccCCCcccce-eEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC-CcceeEEE
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSR-VGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF-KRSAVGAA 552 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~-~r~~~~~~ 552 (748)
-..+..||..+++|..+..+...... .+++.. ++..++.|+.+ ..+..||..++++.....+.. ...-.+++
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 103 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKPTLVILRINRAARCVR 103 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEEEEECCCCSSCEEEEE
T ss_pred CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeeeeEEeecCCCceeEEE
Confidence 45788999988877665554422222 233333 56677777754 358888988888765543222 22222333
Q ss_pred EE-CCEEEEEeCCCCCCCCceEEEEeCCCCe-EEEccCCCCC--CcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCC
Q psy10286 553 AL-NDKLYVCGGYDGVSSLNTVECYEPDKDQ-WRIVKSMQKH--RSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKT 627 (748)
Q Consensus 553 ~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~--r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 627 (748)
.. +++.++.|+.+ ..+..||..+.. |........+ ..-.+++.. ++..++.|+.++ .+..||...
T Consensus 104 ~~~~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~ 173 (372)
T 1k8k_C 104 WAPNEKKFAVGSGS-----RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF-----KCRIFSAYI 173 (372)
T ss_dssp ECTTSSEEEEEETT-----SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS-----CEEEEECCC
T ss_pred ECCCCCEEEEEeCC-----CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC-----CEEEEEccc
Confidence 32 66777777754 345566655443 3332222111 111222222 566777777643 578888542
Q ss_pred C----------------cEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcc
Q psy10286 628 D----------------EWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSR 689 (748)
Q Consensus 628 ~----------------~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 689 (748)
. .-..+..+.........+.+ ++..++.|+.+ ..+.+||..+.+-... +......
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~ 246 (372)
T 1k8k_C 174 KEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD-----STVCLADADKKMAVAT--LASETLP 246 (372)
T ss_dssp TTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-----TEEEEEEGGGTTEEEE--EECSSCC
T ss_pred ccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCceeEE--EccCCCC
Confidence 1 11111112111122223333 56677777654 4688999876653322 1111111
Q ss_pred -eEEE-EECCEEEEEeCCCCCCCCCeEEEEeCCC--CceEecCCCC
Q psy10286 690 -VALV-ANMGKLWAIGGYDGVSNLPTVEVYDPST--DSWAFVAPMC 731 (748)
Q Consensus 690 -~~~~-~~~~~l~v~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~~ 731 (748)
.++. .-++++++.| .+ ..+.+||..+ ++|..+..+.
T Consensus 247 v~~~~~~~~~~~l~~~-~d-----~~i~i~~~~~~~~~~~~~~~~~ 286 (372)
T 1k8k_C 247 LLAVTFITESSLVAAG-HD-----CFPVLFTYDSAAGKLSFGGRLD 286 (372)
T ss_dssp EEEEEEEETTEEEEEE-TT-----SSCEEEEEETTTTEEEECCCCC
T ss_pred eEEEEEecCCCEEEEE-eC-----CeEEEEEccCcCceEEEeeccC
Confidence 2222 2367766665 33 2467888777 8898775553
No 84
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.58 E-value=0.07 Score=53.24 Aligned_cols=218 Identities=9% Similarity=0.047 Sum_probs=119.1
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 554 (748)
...+..||+. ++............-++++.. ++.+|+.... ...+.+||+. +++...........-++++..
T Consensus 40 ~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~ 112 (300)
T 2qc5_A 40 ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEG 112 (300)
T ss_dssp TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEEC
T ss_pred CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEecCCCCCCCCccceEC
Confidence 3568889988 666654321111222334433 5788886532 2468999998 666544321122233444443
Q ss_pred -CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCC-CcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 555 -NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKH-RSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 555 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
++++|+.+.. -..+.+||+. ++..... ++.. ..-.+++. -++.+|+.... ...+++||+ +.++.
T Consensus 113 ~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 113 LNGDIWFTQLN-----GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLE 179 (300)
T ss_dssp STTCEEEEETT-----TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEE
T ss_pred CCCCEEEEccC-----CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEE
Confidence 6789987542 2478899988 6555432 2211 12223333 25678886532 246999998 66666
Q ss_pred EccCCCCCCcc-eeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcc-eEEEEE-CCEEEEEeCCCC
Q psy10286 632 SVKPMLTKRCR-LGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSR-VALVAN-MGKLWAIGGYDG 707 (748)
Q Consensus 632 ~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~l~v~GG~~~ 707 (748)
... .+..... .+++.- ++.+|+.... .+.+.+||+ +.++..... +..... .+++.- +++||+....
T Consensus 180 ~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~-- 249 (300)
T 2qc5_A 180 EYP-LPTNAAAPVGITSGNDGALWFVEIM-----GNKIGRITT-TGEISEYDI-PTPNARPHAITAGKNSEIWFTEWG-- 249 (300)
T ss_dssp EEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECSTTCEEEEETT--
T ss_pred Eee-CCCCCCCcceEEECCCCCEEEEccC-----CCEEEEEcC-CCcEEEEEC-CCCCCCceEEEECCCCCEEEeccC--
Confidence 543 2222122 233332 5778887532 247899998 566665422 212222 233332 5788887532
Q ss_pred CCCCCeEEEEeCCCCceEec
Q psy10286 708 VSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 708 ~~~~~~v~~yd~~~~~W~~~ 727 (748)
.+.+.+||+ +++....
T Consensus 250 ---~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 250 ---ANQIGRITN-DNTIQEY 265 (300)
T ss_dssp ---TTEEEEECT-TSCEEEE
T ss_pred ---CCeEEEECC-CCcEEEE
Confidence 246889998 4555543
No 85
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.004 Score=64.99 Aligned_cols=231 Identities=11% Similarity=0.142 Sum_probs=123.2
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--C--CEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--K--NRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAA 552 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 552 (748)
..+..||...+++..+..+............ + +.+++.|+.+ ..+..||..+++|..+..+........++
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 107 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRWSQIAVHAVHSASVNSV 107 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCceeEeeeecCCCcceEEE
Confidence 4577777776666655444322222223333 2 6777777754 35888999999887765544322233333
Q ss_pred EE--C--CEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCC-CCCcceEEEEE--------------CCEEEEEccCCC
Q psy10286 553 AL--N--DKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQ-KHRSAGGVIAF--------------DSYVYALGGHDG 613 (748)
Q Consensus 553 ~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~--------------~~~iyv~GG~~~ 613 (748)
.+ + +..++.|+.+ ..+..||..+........+. ....-.+++.. ++..++.|+.++
T Consensus 108 ~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 182 (379)
T 3jrp_A 108 QWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 182 (379)
T ss_dssp EECCGGGCSEEEEEETT-----SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS
T ss_pred EeCCCCCCCEEEEecCC-----CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC
Confidence 33 3 6677777754 46788888766311110011 11111122222 467788887754
Q ss_pred CcccCeEEEEECCCC--cEEEccCCCCCCcceeEEEE--C---CEEEEEeccCCCccccEEEEEeCCCCc----EEEccC
Q psy10286 614 LSIFDSVERYDPKTD--EWTSVKPMLTKRCRLGVAAL--N---NKIYVCGGYDGAIFLQSVEMYDPITDE----WKMIAS 682 (748)
Q Consensus 614 ~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~i~v~GG~~~~~~~~~v~~yd~~~~~----W~~~~~ 682 (748)
.+..||..+. .|..+..+...........+ + +.+++.||.++ .+.+||..+.. ......
T Consensus 183 -----~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~ 252 (379)
T 3jrp_A 183 -----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCIIWTQDNEQGPWKKTLLKE 252 (379)
T ss_dssp -----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----CEEEEEESSTTSCCEEEESSS
T ss_pred -----eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC-----EEEEEeCCCCCccceeeeecc
Confidence 4777776543 45554433332333333333 4 68888888654 57778776652 222222
Q ss_pred CCCCCcceEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCC-CCceEecCCCCC
Q psy10286 683 MNVMRSRVALVA-NMGKLWAIGGYDGVSNLPTVEVYDPS-TDSWAFVAPMCA 732 (748)
Q Consensus 683 ~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~~~ 732 (748)
......-.+++. -+++.++.||.++ .+.+||.. .+.|..+..+..
T Consensus 253 ~~~~~~v~~~~~s~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 253 EKFPDVLWRASWSLSGNVLALSGGDN-----KVTLWKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp SCCSSCEEEEEECSSSCCEEEEESSS-----SEEEEEEEETTEEEEEEEEC-
T ss_pred ccCCCcEEEEEEcCCCCEEEEecCCC-----cEEEEeCCCCCccccccceec
Confidence 111212222222 2677777777543 47888876 467877655443
No 86
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=97.53 E-value=1.2e-05 Score=80.23 Aligned_cols=66 Identities=21% Similarity=0.549 Sum_probs=53.6
Q ss_pred hhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCCCCCcchHHHHHhhcCchHHHHHHHHH
Q psy10286 219 SCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNVLGIRQFADTLNCLQLSEAADKY 296 (748)
Q Consensus 219 ~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~~~n~~~i~~~a~~~~~~~l~~~~~~~ 296 (748)
+...|+.+++|+|+|.+.+..+++.+++.+|++|+++.|++.|++||.+.+++ -++-.++..+..+
T Consensus 81 ~~~~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~------------~n~~~i~~~A~~~ 146 (256)
T 3hve_A 81 SVMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAA------------ENCIGIRDFALHY 146 (256)
T ss_dssp CHHHHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCS------------STTHHHHHHHHHT
T ss_pred CHHHHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCH------------hhHHHHHHHHHHc
Confidence 34567779999999999999999999999999999999999999999976642 2455666655544
No 87
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.48 E-value=0.0001 Score=62.07 Aligned_cols=81 Identities=21% Similarity=0.290 Sum_probs=61.8
Q ss_pred cEEEE-ECCeEEeeeeeeeeccCHHHHHhhccc--ccccccceeeeecchheehhhccccccccccccccccccceeeee
Q psy10286 76 DVTIK-VDDQSFTCHRIVLAATIPYFQAMFTSD--MAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITM 152 (748)
Q Consensus 76 Dv~i~-~~~~~~~aHk~iL~a~S~~F~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 152 (748)
-|+|+ .+|++|.+++.+ |..|..++.|+... +.|.... .|.+
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~----------------------------------~Ipl 62 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETN----------------------------------EVNF 62 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------C----------------------------------EEEC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCC----------------------------------ceeC
Confidence 46777 488999999994 67899999999752 2222223 3455
Q ss_pred cCCCHHHHHHHHHhhhcee-----------EEeechhHHHHHHHHHHhcc
Q psy10286 153 QGIDAVAMEALINFVYSGR-----------VTIHSQNVQSLMVVASFLQM 191 (748)
Q Consensus 153 ~~~~~~~~~~~l~flYtg~-----------~~i~~~~v~~ll~~A~~l~i 191 (748)
++|+..+++.+++|++.-. ..++.+.+.+|+.||++|+|
T Consensus 63 pnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 63 REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccCHHHHHHHHHHHHHhCc
Confidence 9999999999999998643 35788899999999999985
No 88
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.45 E-value=0.086 Score=54.07 Aligned_cols=258 Identities=13% Similarity=0.037 Sum_probs=134.1
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeeccc--ccccceEEecc-cccccCCCccceEEEEeCCCCceEEccCCCc
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEE--ETLSNAVISTK-SCLTKAGDSLSTVEVFDPLVGRWQMAEAMSM 497 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~--~~~~~~~~~~~-~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~ 497 (748)
++.+|+.............++.||+.+++....-. .......+..+ ..++..+.....++.+|+.+++-...-+...
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~ 131 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDD 131 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCC
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCC
Confidence 45677765332111123578999998876543221 11122233333 3344444444689999999887533222211
Q ss_pred c--------cceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-C-CEEEEEeCCC
Q psy10286 498 L--------RSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-N-DKLYVCGGYD 565 (748)
Q Consensus 498 ~--------r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~ 565 (748)
. ..-++++.. ++.+|+.+... ...++.||+.+.+-...-+.. ....++++.. + +.+|+..+
T Consensus 132 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~-- 204 (353)
T 3vgz_A 132 RKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNT-GKMSTGLALDSEGKRLYTTNA-- 204 (353)
T ss_dssp CCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCC-CTTCCCCEEETTTTEEEEECT--
T ss_pred CccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCC-CCccceEEECCCCCEEEEEcC--
Confidence 1 112334443 45688776321 246999999887644322211 1112233332 4 45666543
Q ss_pred CCCCCceEEEEeCCCCeEEEccCCCC--CCcc-eEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCC
Q psy10286 566 GVSSLNTVECYEPDKDQWRIVKSMQK--HRSA-GGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKR 640 (748)
Q Consensus 566 ~~~~~~~~~~yd~~~~~W~~~~~~~~--~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 640 (748)
-..+..||+.+.+-...-..+. +... .+++.. ++.+|+.+.. .+.+..||+.+.+....-+.+.+
T Consensus 205 ----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~~- 274 (353)
T 3vgz_A 205 ----DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKVAAPES- 274 (353)
T ss_dssp ----TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEEECSSC-
T ss_pred ----CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCC-
Confidence 2478899998886433322211 1222 223333 4567776543 35799999988876544333332
Q ss_pred cceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CC-EEEEEeC
Q psy10286 641 CRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MG-KLWAIGG 704 (748)
Q Consensus 641 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~l~v~GG 704 (748)
.+++.. ++.+|+.++.+ +.+.+||..+.+.... .+.+..-.+++.. ++ .||+.+.
T Consensus 275 --~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 275 --LAVLFNPARNEAYVTHRQA-----GKVSVIDAKSYKVVKT--FDTPTHPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp --CCEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEEE--EECCSEEEEEEECTTSCEEEEEEE
T ss_pred --ceEEECCCCCEEEEEECCC-----CeEEEEECCCCeEEEE--EecCCCCCeEEEcCCCCEEEEEEc
Confidence 223322 34577776432 5799999988765443 2222222333332 44 5777653
No 89
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.44 E-value=0.012 Score=58.31 Aligned_cols=216 Identities=12% Similarity=0.025 Sum_probs=113.1
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 554 (748)
...+..||+.+.......... ...-.+++.. ++.+|+..+ ...+.+||+.+......... ....-.+++..
T Consensus 45 ~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~------~~~i~~~d~~~~~~~~~~~~-~~~~p~~i~~~ 116 (270)
T 1rwi_B 45 YGRVVKLATGSTGTTVLPFNG-LYQPQGLAVDGAGTVYVTDF------NNRVVTLAAGSNNQTVLPFD-GLNYPEGLAVD 116 (270)
T ss_dssp SCEEEEECC-----EECCCCS-CCSCCCEEECTTCCEEEEET------TTEEEEECTTCSCCEECCCC-SCSSEEEEEEC
T ss_pred CCcEEEecCCCcccceEeeCC-cCCcceeEECCCCCEEEEcC------CCEEEEEeCCCceEeeeecC-CcCCCcceEEC
Confidence 356788888776654433211 1112334443 567888764 24689999988765443221 11222344443
Q ss_pred -CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEE
Q psy10286 555 -NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTS 632 (748)
Q Consensus 555 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 632 (748)
+|++|+.... ...+.+||..+........... ..-.+++.. ++.+|+.... ...+.+||+.+..-..
T Consensus 117 ~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 117 TQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQVV 185 (270)
T ss_dssp TTCCEEEEEGG-----GTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEGG-----GTEEEEECTTTCCEEE
T ss_pred CCCCEEEEECC-----CCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEECC-----CCEEEEEecCCCceEe
Confidence 6789987542 2468888877665443321111 112234433 5788887643 2479999998776544
Q ss_pred ccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCEEEEEeCCCCCCC
Q psy10286 633 VKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGKLWAIGGYDGVSN 710 (748)
Q Consensus 633 ~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~ 710 (748)
...... ..-.+++.- ++.+|+....+ +.+.+||+....-...... ....-.+++.. +++||+....+
T Consensus 186 ~~~~~~-~~p~~i~~d~~g~l~v~~~~~-----~~v~~~~~~~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~~---- 254 (270)
T 1rwi_B 186 LPFTDI-TAPWGIAVDEAGTVYVTEHNT-----NQVVKLLAGSTTSTVLPFT-GLNTPLAVAVDSDRTVYVADRGN---- 254 (270)
T ss_dssp CCCSSC-CSEEEEEECTTCCEEEEETTT-----SCEEEECTTCSCCEECCCC-SCSCEEEEEECTTCCEEEEEGGG----
T ss_pred ecccCC-CCceEEEECCCCCEEEEECCC-----CcEEEEcCCCCcceeeccC-CCCCceeEEECCCCCEEEEECCC----
Confidence 321111 122333333 46888876432 4688999877543332211 11112333332 57888886532
Q ss_pred CCeEEEEeCCCC
Q psy10286 711 LPTVEVYDPSTD 722 (748)
Q Consensus 711 ~~~v~~yd~~~~ 722 (748)
..|.+|++...
T Consensus 255 -~~v~~~~~~~~ 265 (270)
T 1rwi_B 255 -DRVVKLTSLEH 265 (270)
T ss_dssp -TEEEEECCCGG
T ss_pred -CEEEEEcCCCc
Confidence 46888887543
No 90
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.43 E-value=0.00012 Score=62.87 Aligned_cols=49 Identities=24% Similarity=0.375 Sum_probs=44.2
Q ss_pred hhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhh
Q psy10286 219 SCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKK 267 (748)
Q Consensus 219 ~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~ 267 (748)
+...|+.+++|+|||.+.+..+|+.+++.+|++|+++.|++.|++++.+
T Consensus 69 ~~~~f~~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 69 SPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp CHHHHHHHHHHHTTCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 4567788999999999999999999999999999999999999998763
No 91
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.43 E-value=0.031 Score=59.98 Aligned_cols=265 Identities=18% Similarity=0.222 Sum_probs=139.7
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceee-cccccc-cceEEecccccccCCCccceEEEEeCCCCceEEccCCCcc
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQM-AEEETL-SNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSML 498 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~-~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~ 498 (748)
++..++.|+.+ .++..||..+++-.. +..... ..++...+. ....|..-..+..||..+++-... +...
T Consensus 128 ~g~~l~sg~~d------g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~--~~~h 198 (445)
T 2ovr_B 128 CGNRIVSGSDD------NTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-IIISGSTDRTLKVWNAETGECIHT--LYGH 198 (445)
T ss_dssp ETTEEEEEETT------SCEEEEETTTCCEEEECCCCSSCEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEE--ECCC
T ss_pred cCCEEEEEECC------CcEEEEECCCCcEEEEEcCCCCCEEEEEecCC-EEEEEeCCCeEEEEECCcCcEEEE--ECCC
Confidence 44556666643 257888877665432 111110 011111122 222223335688889887754322 1111
Q ss_pred cceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeC
Q psy10286 499 RSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEP 578 (748)
Q Consensus 499 r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 578 (748)
.....+...++..++.|+.+ ..+..||..+.+-...-. .......++..++..++.|+.+ ..+..||+
T Consensus 199 ~~~v~~~~~~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~d-----g~i~iwd~ 266 (445)
T 2ovr_B 199 TSTVRCMHLHEKRVVSGSRD-----ATLRVWDIETGQCLHVLM--GHVAAVRCVQYDGRRVVSGAYD-----FMVKVWDP 266 (445)
T ss_dssp SSCEEEEEEETTEEEEEETT-----SEEEEEESSSCCEEEEEE--CCSSCEEEEEECSSCEEEEETT-----SCEEEEEG
T ss_pred CCcEEEEEecCCEEEEEeCC-----CEEEEEECCCCcEEEEEc--CCcccEEEEEECCCEEEEEcCC-----CEEEEEEC
Confidence 12222333345556667644 468889988765332211 1112223344477777788755 36788888
Q ss_pred CCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEecc
Q psy10286 579 DKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGY 658 (748)
Q Consensus 579 ~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 658 (748)
.+.+-.. .+............++..++.|+.++ .+..||..+.+-... +............++..++.|+.
T Consensus 267 ~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~ 337 (445)
T 2ovr_B 267 ETETCLH--TLQGHTNRVYSLQFDGIHVVSGSLDT-----SIRVWDVETGNCIHT--LTGHQSLTSGMELKDNILVSGNA 337 (445)
T ss_dssp GGTEEEE--EECCCSSCEEEEEECSSEEEEEETTS-----CEEEEETTTCCEEEE--ECCCCSCEEEEEEETTEEEEEET
T ss_pred CCCcEeE--EecCCCCceEEEEECCCEEEEEeCCC-----eEEEEECCCCCEEEE--EcCCcccEEEEEEeCCEEEEEeC
Confidence 7765322 22222222333444777777777643 588999887653322 11222223334445667777775
Q ss_pred CCCccccEEEEEeCCCCcEEE-ccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 659 DGAIFLQSVEMYDPITDEWKM-IASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 659 ~~~~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
+ ..+.+||..+.+-.. +...........++..++..++.||.+ ..|.+||..+++..
T Consensus 338 d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 338 D-----STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDD-----GTVKLWDLKTGEFI 395 (445)
T ss_dssp T-----SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCEE
T ss_pred C-----CeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCC-----CeEEEEECCCCcee
Confidence 4 368889987765332 222111223344455677888888754 36899999887653
No 92
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.42 E-value=0.018 Score=56.85 Aligned_cols=155 Identities=15% Similarity=0.098 Sum_probs=101.1
Q ss_pred eEEEEEC-CEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCC
Q psy10286 549 VGAAALN-DKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKT 627 (748)
Q Consensus 549 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 627 (748)
++.+..+ +.+|+..|..+ -+.+..+|+.+++=...-+++...+..+.+..++++|+.... .+.+.+||+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-----~~~v~viD~~t 95 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-----KNIGFIYDRRT 95 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----CSEEEEEETTT
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----CCEEEEEECCC
Confidence 6676665 89999877432 268999999999865544455544556777889999999764 35799999987
Q ss_pred CcEEEccCCCCC-CcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEE-c--cCCCCCC-cceEEEEECCEEEEE
Q psy10286 628 DEWTSVKPMLTK-RCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-I--ASMNVMR-SRVALVANMGKLWAI 702 (748)
Q Consensus 628 ~~W~~~~~~p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~p~~r-~~~~~~~~~~~l~v~ 702 (748)
.+-. ...+.+ ..+.+.+.-++++|+..| .+.++.+|+.+.+-.. + +.-+.+. .-..+...++++|+-
T Consensus 96 ~~v~--~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn 167 (266)
T 2iwa_A 96 LSNI--KNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWAN 167 (266)
T ss_dssp TEEE--EEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred CcEE--EEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEe
Confidence 6532 223322 334455555677888754 3689999999876432 2 2211121 112333448899876
Q ss_pred eCCCCCCCCCeEEEEeCCCCce
Q psy10286 703 GGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~~~W 724 (748)
-. ..++|.+.|+++++=
T Consensus 168 ~~-----~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 168 IW-----QTDCIARISAKDGTL 184 (266)
T ss_dssp ET-----TSSEEEEEETTTCCE
T ss_pred cC-----CCCeEEEEECCCCcE
Confidence 43 235899999998753
No 93
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.40 E-value=0.0067 Score=59.29 Aligned_cols=152 Identities=14% Similarity=0.059 Sum_probs=103.5
Q ss_pred eEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCC
Q psy10286 549 VGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTD 628 (748)
Q Consensus 549 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 628 (748)
.+....++.+|+..|..+ .+..+|+.+++=...- ++..-++.+++..+++||+.... .+.+++||+++.
T Consensus 58 qGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~-----~~~v~V~D~~Tl 126 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT-----EGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS-----SCEEEEEETTTT
T ss_pred ceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc-----CCEEEEEECCcC
Confidence 566667899999999654 3889999988743333 55555666788889999998765 357999999887
Q ss_pred cEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEE-c--cCCCCCCcc-eEEEEECCEEEEEeC
Q psy10286 629 EWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-I--ASMNVMRSR-VALVANMGKLWAIGG 704 (748)
Q Consensus 629 ~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~p~~r~~-~~~~~~~~~l~v~GG 704 (748)
+-.. ..+.+..+.+++.-++++|+.-| .+.++.+|+++.+-.. + +.-+.+... -.+...+|+||+--
T Consensus 127 ~~~~--ti~~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv- 197 (268)
T 3nok_A 127 QRER--TTRYSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI- 197 (268)
T ss_dssp EEEE--EEECSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE-
T ss_pred cEEE--EEeCCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE-
Confidence 6443 33334456677777889999876 3689999999976443 2 221212111 12344589988532
Q ss_pred CCCCCCCCeEEEEeCCCCce
Q psy10286 705 YDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~~W 724 (748)
+ ..++|.+.||++++=
T Consensus 198 w----~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 198 W----HSSDVLEIDPATGTV 213 (268)
T ss_dssp T----TCSEEEEECTTTCBE
T ss_pred C----CCCeEEEEeCCCCcE
Confidence 1 235899999999853
No 94
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.38 E-value=0.018 Score=67.22 Aligned_cols=217 Identities=10% Similarity=0.093 Sum_probs=125.5
Q ss_pred ceEEEEeCCCCceEEccCC-Ccc-cceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCC-CCcceeEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAM-SML-RSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC-FKRSAVGAA 552 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~-~~~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~-~~r~~~~~~ 552 (748)
.-+.+||+.++++...... ..+ ..-.+++.. ++.||+ |.. ...+.+||+.+++++...... ....-.+.+
T Consensus 383 ~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~-----~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~ 456 (781)
T 3v9f_A 383 GGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTY-----LGNISYYNTRLKKFQIIELEKNELLDVRVFY 456 (781)
T ss_dssp SCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EET-----TEEEEEECSSSCEEEECCSTTTCCCCEEEEE
T ss_pred CcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eec-----cCCEEEEcCCCCcEEEeccCCCCCCeEEEEE
Confidence 3588899988777654211 111 122333333 677887 322 135899999999998875321 112222333
Q ss_pred EE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCC----CCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECC
Q psy10286 553 AL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQK----HRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPK 626 (748)
Q Consensus 553 ~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~----~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~ 626 (748)
.. +|.||+... ..+.+||+.+++|......+. ...-.+++. .+|.|++-... ..+++||+.
T Consensus 457 ~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~------~Gl~~~~~~ 523 (781)
T 3v9f_A 457 EDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG------GGVGIYTPD 523 (781)
T ss_dssp ECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS------SCEEEECTT
T ss_pred ECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC------CCEEEEeCC
Confidence 33 578887432 468999999998876643321 111122222 25677764321 248999999
Q ss_pred CCcEEEccC---CCCCCcceeEEE-ECCEEEEEeccCCCccccEE-EEEeCCCCcEEEccC---CCCCCcceEEEEE-CC
Q psy10286 627 TDEWTSVKP---MLTKRCRLGVAA-LNNKIYVCGGYDGAIFLQSV-EMYDPITDEWKMIAS---MNVMRSRVALVAN-MG 697 (748)
Q Consensus 627 ~~~W~~~~~---~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v-~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~ 697 (748)
+++++.... ++.... .+++. -++.||+... +.+ .+||++++++..... +|.... .+++.- +|
T Consensus 524 ~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g 594 (781)
T 3v9f_A 524 MQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNG 594 (781)
T ss_dssp CCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSS
T ss_pred CCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCC
Confidence 999887653 221111 22222 2567877643 346 899999988877642 333332 233333 57
Q ss_pred EEEEEeCCCCCCCCCeEEEEeCCCCceEecC
Q psy10286 698 KLWAIGGYDGVSNLPTVEVYDPSTDSWAFVA 728 (748)
Q Consensus 698 ~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (748)
.|++.+. +.+.+|||++++++...
T Consensus 595 ~lW~~t~-------~Gl~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 595 NIWASTN-------TGISCYITSKKCFYTYD 618 (781)
T ss_dssp CEEEECS-------SCEEEEETTTTEEEEEC
T ss_pred CEEEEcC-------CceEEEECCCCceEEec
Confidence 8887653 35899999999887754
No 95
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.33 E-value=0.067 Score=57.32 Aligned_cols=267 Identities=16% Similarity=0.197 Sum_probs=138.8
Q ss_pred cEEEEEcCccCCCCCCcceEeecCCCCceeec-ccccc-cceEEecccccccCCCccceEEEEeCCCCceEEccCCCccc
Q psy10286 422 GHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMA-EEETL-SNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSMLR 499 (748)
Q Consensus 422 ~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~-~~~~~-~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r 499 (748)
+.+++.||.+ ..+..||..+++-... ..... ...+...+. ....|..-..+..||..+++-...- ....
T Consensus 169 ~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~~~~~--~~~~ 239 (445)
T 2ovr_B 169 DNIIISGSTD------RTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-RVVSGSRDATLRVWDIETGQCLHVL--MGHV 239 (445)
T ss_dssp TTEEEEEETT------SCEEEEETTTTEEEEEECCCSSCEEEEEEETT-EEEEEETTSEEEEEESSSCCEEEEE--ECCS
T ss_pred CCEEEEEeCC------CeEEEEECCcCcEEEEECCCCCcEEEEEecCC-EEEEEeCCCEEEEEECCCCcEEEEE--cCCc
Confidence 4456666653 2578888777654321 11111 111111122 2222233357888898876543221 1111
Q ss_pred ceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCC
Q psy10286 500 SRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPD 579 (748)
Q Consensus 500 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 579 (748)
....+...++..++.|+.+ ..+..||+.+.+-... +........+...++..++.|+.+ ..+..||..
T Consensus 240 ~~v~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~i~d~~ 307 (445)
T 2ovr_B 240 AAVRCVQYDGRRVVSGAYD-----FMVKVWDPETETCLHT--LQGHTNRVYSLQFDGIHVVSGSLD-----TSIRVWDVE 307 (445)
T ss_dssp SCEEEEEECSSCEEEEETT-----SCEEEEEGGGTEEEEE--ECCCSSCEEEEEECSSEEEEEETT-----SCEEEEETT
T ss_pred ccEEEEEECCCEEEEEcCC-----CEEEEEECCCCcEeEE--ecCCCCceEEEEECCCEEEEEeCC-----CeEEEEECC
Confidence 2222333477777778754 3578889877653322 111112223334477777777755 468889988
Q ss_pred CCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCC-CCCcceeEEEECCEEEEEecc
Q psy10286 580 KDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPML-TKRCRLGVAALNNKIYVCGGY 658 (748)
Q Consensus 580 ~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~i~v~GG~ 658 (748)
+.+-... +............++..++.|+.++ .+..||..+.+-...-..+ .......+...++..++.||.
T Consensus 308 ~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~ 380 (445)
T 2ovr_B 308 TGNCIHT--LTGHQSLTSGMELKDNILVSGNADS-----TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD 380 (445)
T ss_dssp TCCEEEE--ECCCCSCEEEEEEETTEEEEEETTS-----CEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEET
T ss_pred CCCEEEE--EcCCcccEEEEEEeCCEEEEEeCCC-----eEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeC
Confidence 7653221 1111222233334555667777643 5889998776543221111 122334445557777888875
Q ss_pred CCCccccEEEEEeCCCCcEEE-ccCCC-CC-Cc-ceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 659 DGAIFLQSVEMYDPITDEWKM-IASMN-VM-RS-RVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 659 ~~~~~~~~v~~yd~~~~~W~~-~~~~p-~~-r~-~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
+ ..+.+||..+.+... +.... .. .. -.++... ++.+++.|+.++. ....+.+||...+
T Consensus 381 d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~-~~~~l~v~df~~~ 443 (445)
T 2ovr_B 381 D-----GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT-EETKLLVLDFDVD 443 (445)
T ss_dssp T-----SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS-SCCEEEEEECCCC
T ss_pred C-----CeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC-CccEEEEEECCCC
Confidence 4 478999998876543 21111 11 11 1222222 5666677776654 2346888887653
No 96
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.32 E-value=0.16 Score=50.51 Aligned_cols=220 Identities=10% Similarity=0.075 Sum_probs=116.4
Q ss_pred ceEEEEeCCCCceEEccCCC----cccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeE
Q psy10286 477 STVEVFDPLVGRWQMAEAMS----MLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVG 550 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~----~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~ 550 (748)
..+..||+............ ....-.++++. ++.+|+.+.. ....+.+||+....-..+.. +....-++
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~~~~~~~~-~~~~~~~~ 125 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQFVRKFGA-TILQHPRG 125 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTSCEEEEECT-TTCSCEEE
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----CCCEEEEECCCCcEEEEecC-ccCCCceE
Confidence 56888988754433332211 11122445553 6789988632 12468899965554333322 11112234
Q ss_pred EEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCC
Q psy10286 551 AAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTD 628 (748)
Q Consensus 551 ~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 628 (748)
++.. +|++|+.... ...+.+||+................-.+++.. ++.+|+.+.. ...+.+||+...
T Consensus 126 i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~ 195 (286)
T 1q7f_A 126 VTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQ 195 (286)
T ss_dssp EEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG-----GTEEEEEETTCC
T ss_pred EEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC-----CCEEEEEcCCCC
Confidence 4443 6789987643 25789999876655444321111111233333 6789987653 357999998766
Q ss_pred cEEEccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCEEEEEeCCC
Q psy10286 629 EWTSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGKLWAIGGYD 706 (748)
Q Consensus 629 ~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~ 706 (748)
....+........-.+++.- ++.+|+.+..++ ..|.+||+....-..+..-.....-.+++.. ++++||... +
T Consensus 196 ~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~-~ 270 (286)
T 1q7f_A 196 YLRQIGGEGITNYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASK-D 270 (286)
T ss_dssp EEEEESCTTTSCSEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEET-T
T ss_pred EEEEEccCCccCCCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECC-C
Confidence 54444321111112233332 578888875321 2799999876544444321111112233333 789998842 2
Q ss_pred CCCCCCeEEEEeCCC
Q psy10286 707 GVSNLPTVEVYDPST 721 (748)
Q Consensus 707 ~~~~~~~v~~yd~~~ 721 (748)
+.|.+|+...
T Consensus 271 -----~~v~v~~~~~ 280 (286)
T 1q7f_A 271 -----YRLYIYRYVQ 280 (286)
T ss_dssp -----TEEEEEECSC
T ss_pred -----CeEEEEEccc
Confidence 4688887643
No 97
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.32 E-value=0.04 Score=64.30 Aligned_cols=215 Identities=9% Similarity=0.165 Sum_probs=125.2
Q ss_pred ceEEEEeCCCCceEEccCCC-------cccceeEEEEE-CCE-EEEEccCCCCCCCCeEEEEECCCCeEEEccC----CC
Q psy10286 477 STVEVFDPLVGRWQMAEAMS-------MLRSRVGVAVM-KNR-LYAFGGYNGSERLSTVEEFDPVRRVWNKVSP----MC 543 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~-------~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~----~~ 543 (748)
.-+.+||+.++++......+ ....-.+++.. ++. ||+ |... ..+.+||+.++++..... ++
T Consensus 377 ~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~-----~Gl~~~d~~~~~~~~~~~~~~~l~ 450 (795)
T 4a2l_A 377 GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA-----GGLSILHRNSGQVENFNQRNSQLV 450 (795)
T ss_dssp SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT-----TEEEEEETTTCCEEEECTTTSCCS
T ss_pred CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc-----CceeEEeCCCCcEEEeecCCCCcC
Confidence 35889999999887764321 11222344443 566 776 3221 358899999998877643 12
Q ss_pred CCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCC--C--CCCcc-eEEEE-ECCEEEEEccCCCCcc
Q psy10286 544 FKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSM--Q--KHRSA-GGVIA-FDSYVYALGGHDGLSI 616 (748)
Q Consensus 544 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--~--~~r~~-~~~~~-~~~~iyv~GG~~~~~~ 616 (748)
.. .-.+.+.. +|.||+... ..+.+||+.+++|+..... + .+... .++.. .+|.|++-..
T Consensus 451 ~~-~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~------ 516 (795)
T 4a2l_A 451 NE-NVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE------ 516 (795)
T ss_dssp CS-CEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES------
T ss_pred CC-eeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC------
Confidence 11 11222222 577887532 3589999999999887533 1 11111 12222 2577887543
Q ss_pred cCeEEEEECCCCcEEEccCC---C-CC-CcceeEEE-ECCEEEEEeccCCCccccEEEEEeCCCCcEEEccC---CCCCC
Q psy10286 617 FDSVERYDPKTDEWTSVKPM---L-TK-RCRLGVAA-LNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIAS---MNVMR 687 (748)
Q Consensus 617 ~~~~~~yd~~~~~W~~~~~~---p-~~-r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r 687 (748)
..+++||+.++++ ..... + .+ ..-.+++. -+|.||+... ..+++||++++++..... +|...
T Consensus 517 -~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~~ 587 (795)
T 4a2l_A 517 -EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNNV 587 (795)
T ss_dssp -SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------SCEEEEETTTTEEEEECGGGTCSCSC
T ss_pred -CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------CCceeECCCCCcEEEeCCCCCCchhh
Confidence 2489999999888 43311 1 11 11122222 2577887542 248899999999887642 33322
Q ss_pred cceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCCceEecC
Q psy10286 688 SRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFVA 728 (748)
Q Consensus 688 ~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (748)
. .+++.- +|.|++.+. +.+.+|||++++++...
T Consensus 588 i-~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~ 621 (795)
T 4a2l_A 588 V-YGILEDSFGRLWLSTN-------RGISCFNPETEKFRNFT 621 (795)
T ss_dssp E-EEEEECTTSCEEEEET-------TEEEEEETTTTEEEEEC
T ss_pred e-EEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEcC
Confidence 1 222222 578888763 36899999999888654
No 98
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.31 E-value=0.0069 Score=65.07 Aligned_cols=267 Identities=16% Similarity=0.169 Sum_probs=132.7
Q ss_pred cCcEEEEEcCccCCCCCCcceEeecCCCCceeec-ccccccceEEecccccccCCCccceEEEEeCCCCceEEccCCCcc
Q psy10286 420 VMGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMA-EEETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSML 498 (748)
Q Consensus 420 ~~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~ 498 (748)
.++..++.|+.+ ..+.+||..+++-... .........+..++.....|..-..+..||..+++-... +...
T Consensus 141 ~d~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~--~~~h 212 (435)
T 1p22_A 141 YDDQKIVSGLRD------NTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNT--LIHH 212 (435)
T ss_dssp CCSSEEEEEESS------SCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEE--ECCC
T ss_pred ECCCEEEEEeCC------CeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEE--EcCC
Confidence 456667777653 2578888776554322 111111111112222223333345688899887764322 1111
Q ss_pred cceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEE-ccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEe
Q psy10286 499 RSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNK-VSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYE 577 (748)
Q Consensus 499 r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 577 (748)
.........++..++.||.+ ..+..||..+..-.. ...+........++..++..++.|+.+ ..+..||
T Consensus 213 ~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~i~vwd 282 (435)
T 1p22_A 213 CEAVLHLRFNNGMMVTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD-----RTIKVWN 282 (435)
T ss_dssp CSCEEEEECCTTEEEEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT-----SEEEEEE
T ss_pred CCcEEEEEEcCCEEEEeeCC-----CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEE
Confidence 22223333355567777754 357888887654211 011111112223333466666677654 4688899
Q ss_pred CCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEec
Q psy10286 578 PDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGG 657 (748)
Q Consensus 578 ~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 657 (748)
..+.+-... +........+...++..++.|+.++ .+..||..+.+-... +........++.+++..++.|+
T Consensus 283 ~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~dg-----~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~sg~ 353 (435)
T 1p22_A 283 TSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIECGACLRV--LEGHEELVRCIRFDNKRIVSGA 353 (435)
T ss_dssp TTTCCEEEE--EECCSSCEEEEEEETTEEEEEETTS-----CEEEEETTTCCEEEE--ECCCSSCEEEEECCSSEEEEEE
T ss_pred CCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCCC-----eEEEEECCCCCEEEE--EeCCcCcEEEEEecCCEEEEEe
Confidence 887653222 1111222334444666777777643 588999887653221 2222223344455788888888
Q ss_pred cCCCccccEEEEEeCCCCc----------EEEccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceEe
Q psy10286 658 YDGAIFLQSVEMYDPITDE----------WKMIASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~----------W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (748)
.++ .+.+||..+.. -..+..... ....+..++..++.||.+ ..+.+||..++.-..
T Consensus 354 ~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~l~s~s~D-----g~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 354 YDG-----KIKVWDLVAALDPRAPAGTLCLRTLVEHSG---RVFRLQFDEFQIVSSSHD-----DTILIWDFLNDPAAQ 419 (435)
T ss_dssp TTS-----CEEEEEHHHHTSTTSCTTTTEEEEECCCSS---CCCCEEECSSCEEECCSS-----SEEEEEC--------
T ss_pred CCC-----cEEEEECCCCCCccccccchheeeccCCCC---CeEEEEeCCCEEEEEeCC-----CEEEEEECCCCCCcc
Confidence 653 57778764332 112211111 112223377778888754 368999988765443
No 99
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=97.28 E-value=6.3e-05 Score=65.98 Aligned_cols=74 Identities=22% Similarity=0.490 Sum_probs=50.1
Q ss_pred HHHHHHHhhhcccC--CcccchhhhhhhhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhc
Q psy10286 195 ADACADFLKKRFHP--NNVLDYYVLFSCRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFLKKR 268 (748)
Q Consensus 195 ~~~c~~~l~~~l~~--~ncl~i~~~~~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~ 268 (748)
...++.|+...+.. .+.+.+-.-.+...|+.+++|+|+|.+.+..+|+.+++.+|++|+++.|++.|++||.+.
T Consensus 52 Laa~S~~F~~~f~~~~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 52 LAASSSYFRDLFNNSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HHHHBHHHHHHHHHCCCSEEECCTTCCHHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred HHHcCHHHHHHHcCCCCCEEEECCCCCHHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 34455555443332 233333223566788999999999999999999999999999999999999999999753
No 100
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.24 E-value=0.041 Score=56.24 Aligned_cols=185 Identities=14% Similarity=0.092 Sum_probs=99.2
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEE-ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAA-LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
++.+.+.|+.+ ..+..+|..+.+-...-....... .+++. -+++.++.|+.+ ..+..||..+..-...
T Consensus 91 ~~~~l~s~s~D-----~~i~lWd~~~~~~~~~~~~~~~~~-~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 91 TLPIAASSSLD-----AHIRLWDLENGKQIKSIDAGPVDA-WTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYS 159 (321)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCTTCC-CCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCEEEEEeCCCccE-EEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEE
Confidence 44566667654 468888988876432211111111 12222 267777777754 4678888877653222
Q ss_pred cCCCCCCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCcc
Q psy10286 587 KSMQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIF 663 (748)
Q Consensus 587 ~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~ 663 (748)
-... ...-.+++. -+++.++.|+.++ .+..||..+.+-... +.........+.+ ++.+++.|+.+
T Consensus 160 ~~~~-~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~d---- 227 (321)
T 3ow8_A 160 LDTR-GKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDD---- 227 (321)
T ss_dssp EECS-SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTT----
T ss_pred ecCC-CceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCC----
Confidence 1111 111112222 2667777787654 588999988754322 1111111122223 67788888765
Q ss_pred ccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 664 LQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 664 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
..+.+||..+...... +.........+.. +++.++.||.++ .+.+||..+++
T Consensus 228 -g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D~-----~v~iwd~~~~~ 281 (321)
T 3ow8_A 228 -GYIKIYDVQHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSDK-----SVKVWDVGTRT 281 (321)
T ss_dssp -SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTE
T ss_pred -CeEEEEECCCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCE
Confidence 3588899877654322 2111222222333 577777887543 58888887764
No 101
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.23 E-value=2.3e-05 Score=80.65 Aligned_cols=46 Identities=17% Similarity=0.397 Sum_probs=41.9
Q ss_pred hhHHHHHHHhhcceeEEEecccHHHHHHHhhhcCcHHHHHHHHHHH
Q psy10286 220 CRAMEALINFAYSGRVTIHSQNVQSLMVVASFLQMQKVADACADFL 265 (748)
Q Consensus 220 ~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l 265 (748)
...|+.+++|+|++.+.+..+++.+|+.+|++|+++.|++.|+++|
T Consensus 223 ~~~f~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 268 (312)
T 3hqi_A 223 PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDAL 268 (312)
T ss_dssp HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 3566779999999999888899999999999999999999999886
No 102
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.22 E-value=0.044 Score=63.79 Aligned_cols=245 Identities=10% Similarity=0.102 Sum_probs=136.1
Q ss_pred eEeecCCCCceeeccc-ccc----cceEEec-ccccccCCCccceEEEEeCCCCceEEccCCCcc-cceeEEEEE-CCEE
Q psy10286 440 VEVFDPLVGRWQMAEE-ETL----SNAVIST-KSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSML-RSRVGVAVM-KNRL 511 (748)
Q Consensus 440 ~~~y~~~~~~W~~~~~-~~~----~~~~~~~-~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~-r~~~~~~~~-~~~i 511 (748)
+.+||+.++++..... ... ..+++.. .+.+.. |....-+.+||+.+++++.......+ ..-.+++.. ++.|
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l 463 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKI 463 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEE
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCE
Confidence 6788888777765421 111 1122222 333333 22235689999999999887532111 122233333 5678
Q ss_pred EEEccCCCCCCCCeEEEEECCCCeEEEccCCC---C-CcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 512 YAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC---F-KRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 512 yv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~---~-~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
|+... ..+.+||+.+++|......+ . ...-.+++.- +|.||+... . ..+.+||+.+++++..
T Consensus 464 wigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-----~Gl~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 464 WIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G-----GGVGIYTPDMQLVRKF 530 (781)
T ss_dssp EEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S-----SCEEEECTTCCEEEEE
T ss_pred EEEEC-------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C-----CCEEEEeCCCCeEEEc
Confidence 87432 35899999998887654322 0 1111222222 678887432 1 3488999999998877
Q ss_pred cC---CCCCCcceEEEE-ECCEEEEEccCCCCcccCeE-EEEECCCCcEEEcc---CCCCCCcceeEEEE-CCEEEEEec
Q psy10286 587 KS---MQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSV-ERYDPKTDEWTSVK---PMLTKRCRLGVAAL-NNKIYVCGG 657 (748)
Q Consensus 587 ~~---~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~-~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~i~v~GG 657 (748)
.. ++.... .+++. .+|.|++-.. ..+ .+||+.++++.... .+|.... .+++.- +|.||+.+.
T Consensus 531 ~~~~~l~~~~i-~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~ 601 (781)
T 3v9f_A 531 NQYEGFCSNTI-NQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN 601 (781)
T ss_dssp CTTTTCSCSCE-EEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS
T ss_pred cCCCCCCCCee-EEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC
Confidence 53 221111 12222 2577777543 246 89999998887664 2333332 333333 577887753
Q ss_pred cCCCccccEEEEEeCCCCcEEEcc---CCCCCCcceEEEE-E-CCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 658 YDGAIFLQSVEMYDPITDEWKMIA---SMNVMRSRVALVA-N-MGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~-~-~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
+.+.+||+++.++.... .++...+...++. . +|+||+ ||.+ .+..|||+.
T Consensus 602 -------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~~------Gl~~f~p~~ 656 (781)
T 3v9f_A 602 -------TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYF-GSIN------GLCFFNPDI 656 (781)
T ss_dssp -------SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEE-EETT------EEEEECSCC
T ss_pred -------CceEEEECCCCceEEecccCCccccccccCceEECCCCEEEE-ECCC------ceEEEChhh
Confidence 45889999999988764 2444443333333 3 566655 5532 456666654
No 103
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.21 E-value=0.17 Score=50.88 Aligned_cols=226 Identities=15% Similarity=0.165 Sum_probs=112.7
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeecc-c--ccccceEEecccccccCCCccceEEEEeCCCCceEEccCCCc
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAE-E--ETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSM 497 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~-~--~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~ 497 (748)
++..++.|+.++ .+..|+..+++....- . ..+....+..++.....|..-..+..||..+++-... +..
T Consensus 34 ~~~~l~s~~~dg------~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~--~~~ 105 (312)
T 4ery_A 34 NGEWLASSSADK------LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT--LKG 105 (312)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE--EEC
T ss_pred CCCEEEEeeCCC------eEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEE--EcC
Confidence 344566666432 4677777766654321 1 1111222333333333333345788889887754221 111
Q ss_pred ccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceE
Q psy10286 498 LRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTV 573 (748)
Q Consensus 498 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 573 (748)
.......+.. ++..++.|+.+ ..+..||..+.+-... ++..........+ ++..++.|+.+ ..+
T Consensus 106 ~~~~v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i 173 (312)
T 4ery_A 106 HSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD-----GLC 173 (312)
T ss_dssp CSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC-----CcE
Confidence 1111112222 55677777754 3588899887653322 1111111222222 66777788765 368
Q ss_pred EEEeCCCCeEEEccCCCCCCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEEEc-cCCCCCCcc-eeEEE-EC
Q psy10286 574 ECYEPDKDQWRIVKSMQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWTSV-KPMLTKRCR-LGVAA-LN 649 (748)
Q Consensus 574 ~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~-~~~~~-~~ 649 (748)
..||..+.+....-.......-..++. -++..++.|+.+ ..+..||..+.+-... ......... ..... -+
T Consensus 174 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-----NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 248 (312)
T ss_dssp EEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT-----TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSS
T ss_pred EEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCC
Confidence 889988766432211111111111222 256666667664 3688899887754322 111111111 12222 35
Q ss_pred CEEEEEeccCCCccccEEEEEeCCCCc
Q psy10286 650 NKIYVCGGYDGAIFLQSVEMYDPITDE 676 (748)
Q Consensus 650 ~~i~v~GG~~~~~~~~~v~~yd~~~~~ 676 (748)
+.+++.||.+ ..+.+||..+.+
T Consensus 249 ~~~l~sg~~d-----g~i~vwd~~~~~ 270 (312)
T 4ery_A 249 GKWIVSGSED-----NLVYIWNLQTKE 270 (312)
T ss_dssp SCEEEECCTT-----SCEEEEETTTCC
T ss_pred CcEEEEECCC-----CEEEEEECCCch
Confidence 6777788764 368889988765
No 104
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.20 E-value=0.048 Score=57.63 Aligned_cols=255 Identities=13% Similarity=0.168 Sum_probs=130.2
Q ss_pred ceEeecCCCCceeeccccc----ccceEEecccccccCCCccceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEE
Q psy10286 439 TVEVFDPLVGRWQMAEEET----LSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAF 514 (748)
Q Consensus 439 ~~~~y~~~~~~W~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~ 514 (748)
.+..||..+++........ +....+..++.....|..-..+..||..+++....-. ...........++.+++.
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~ 191 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA--GHQARVGCLSWNRHVLSS 191 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEEETTEEEE
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec--CCCCceEEEEECCCEEEE
Confidence 5888888887765543221 1122233333333333333568889988776433221 112222333346667777
Q ss_pred ccCCCCCCCCeEEEEECCCCeE--EEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCC
Q psy10286 515 GGYNGSERLSTVEEFDPVRRVW--NKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQK 591 (748)
Q Consensus 515 GG~~~~~~~~~v~~yd~~t~~W--~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~ 591 (748)
|+.+ ..+..||..+..- ..... ....-.+++.. ++..++.||.+ ..+..||..+..-...-. ..
T Consensus 192 ~~~d-----g~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~-~~ 258 (401)
T 4aez_A 192 GSRS-----GAIHHHDVRIANHQIGTLQG--HSSEVCGLAWRSDGLQLASGGND-----NVVQIWDARSSIPKFTKT-NH 258 (401)
T ss_dssp EETT-----SEEEEEETTSSSCEEEEEEC--CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTCSSEEEEEC-CC
T ss_pred EcCC-----CCEEEEecccCcceeeEEcC--CCCCeeEEEEcCCCCEEEEEeCC-----CeEEEccCCCCCccEEec-CC
Confidence 7754 4688899874321 11111 11111222222 67777888755 468889988754322111 11
Q ss_pred CCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CC-EEEEEeccCCCccccE
Q psy10286 592 HRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NN-KIYVCGGYDGAIFLQS 666 (748)
Q Consensus 592 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~ 666 (748)
...-.+++.. ++.+++.||... -..+..||..+.+-...-. ... ....+.+ ++ .+++.+|... ..
T Consensus 259 ~~~v~~~~~~p~~~~ll~~~~gs~---d~~i~i~d~~~~~~~~~~~--~~~-~v~~~~~s~~~~~l~~~~g~~d----g~ 328 (401)
T 4aez_A 259 NAAVKAVAWCPWQSNLLATGGGTM---DKQIHFWNAATGARVNTVD--AGS-QVTSLIWSPHSKEIMSTHGFPD----NN 328 (401)
T ss_dssp SSCCCEEEECTTSTTEEEEECCTT---TCEEEEEETTTCCEEEEEE--CSS-CEEEEEECSSSSEEEEEECTTT----CE
T ss_pred cceEEEEEECCCCCCEEEEecCCC---CCEEEEEECCCCCEEEEEe--CCC-cEEEEEECCCCCeEEEEeecCC----Cc
Confidence 1111233333 456777765211 2468899988776433221 111 1222333 34 4544444322 47
Q ss_pred EEEEeCCCCcEEEccCCCCCCcce-EEE-EECCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 667 VEMYDPITDEWKMIASMNVMRSRV-ALV-ANMGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 667 v~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
+.+||..+........++...... +++ .-+++.++.||.+ ..+.+||..++.
T Consensus 329 i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d-----g~i~iw~~~~~~ 382 (401)
T 4aez_A 329 LSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD-----ENLKFWRVYDGD 382 (401)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT-----SEEEEEECCC--
T ss_pred EEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEECCCCc
Confidence 888998887776654333222222 222 2367777888754 368899987765
No 105
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.17 E-value=0.055 Score=62.02 Aligned_cols=274 Identities=11% Similarity=-0.029 Sum_probs=142.5
Q ss_pred cceEeecCCCCceeeccc--ccccceEEecccc-cccCCCccceEEEEeCCC-----CceEEccCCCcccc---------
Q psy10286 438 STVEVFDPLVGRWQMAEE--ETLSNAVISTKSC-LTKAGDSLSTVEVFDPLV-----GRWQMAEAMSMLRS--------- 500 (748)
Q Consensus 438 ~~~~~y~~~~~~W~~~~~--~~~~~~~~~~~~~-~~~~g~~~~~~~~yd~~~-----~~W~~~~~~~~~r~--------- 500 (748)
.+++.||..+++-..+.. .......+++++. +... .-..++.+|..+ ++...+........
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 467888887776554432 1222333343332 1111 225789999988 77766544332211
Q ss_pred ----eeEEEEE-CCEEEEEccCCC----------------------------CCCCCeEEEEECCCCeEEEccCCCCCcc
Q psy10286 501 ----RVGVAVM-KNRLYAFGGYNG----------------------------SERLSTVEEFDPVRRVWNKVSPMCFKRS 547 (748)
Q Consensus 501 ----~~~~~~~-~~~iyv~GG~~~----------------------------~~~~~~v~~yd~~t~~W~~~~~~~~~r~ 547 (748)
..+++.. +|+..+++..+. ......++++|..+.+-..+........
T Consensus 179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 258 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK 258 (706)
T ss_dssp CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC
T ss_pred hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce
Confidence 1122222 555445544211 1133579999999987665543211112
Q ss_pred eeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCC-eEEEccCCCCCCc----ceEEEEE--CCEEEEEccCCCCcccC
Q psy10286 548 AVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKD-QWRIVKSMQKHRS----AGGVIAF--DSYVYALGGHDGLSIFD 618 (748)
Q Consensus 548 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~----~~~~~~~--~~~iyv~GG~~~~~~~~ 618 (748)
....+.. +|+..++++.+.......++.+|+.+. .+..+........ ......- +|++++.+..++ ..
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g---~~ 335 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG---WN 335 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS---SC
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC---cc
Confidence 2222222 666444544443334468999999988 6665532111111 1122223 677666555443 35
Q ss_pred eEEEEECCCCcEEEccCCCCCCcceeEEEE--C-CEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE
Q psy10286 619 SVERYDPKTDEWTSVKPMLTKRCRLGVAAL--N-NKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN 695 (748)
Q Consensus 619 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 695 (748)
.+|.+|........+..-.... .....+ + +.||+.+..++ .....++.+|..+.....+.. ....+.+...
T Consensus 336 ~l~~~~~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~l~~---~~~~~~~~~s 409 (706)
T 2z3z_A 336 HLYLYDTTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEAS-PLERHFYCIDIKGGKTKDLTP---ESGMHRTQLS 409 (706)
T ss_dssp EEEEEETTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSSC-TTCBEEEEEETTCCCCEESCC---SSSEEEEEEC
T ss_pred EEEEEECCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCCC-CceEEEEEEEcCCCCceeccC---CCceEEEEEC
Confidence 7999997777777764322111 121233 3 45666654322 223589999998877666642 1122333332
Q ss_pred -CCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 696 -MGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 696 -~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
+++.+++.+.+.. ...+++++|..+++
T Consensus 410 pdg~~l~~~~~~~~-~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 410 PDGSAIIDIFQSPT-VPRKVTVTNIGKGS 437 (706)
T ss_dssp TTSSEEEEEEECSS-CSCEEEEEESSSCE
T ss_pred CCCCEEEEEecCCC-CCcEEEEEECCCCe
Confidence 5666666543221 23468999988775
No 106
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.14 E-value=0.1 Score=52.63 Aligned_cols=217 Identities=13% Similarity=0.139 Sum_probs=112.4
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL- 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~- 554 (748)
..+..+|..+++....-.- ....-.+++.. ++..++.||.+ ..+..||..+++-...-.-... .-.++...
T Consensus 45 g~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~ 117 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLKTLKGHSN-YVFCCNFNP 117 (312)
T ss_dssp SCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECCSS-CEEEEEECS
T ss_pred CeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEEEEcCCCC-CEEEEEEcC
Confidence 4577788877766443211 11111222222 56777777754 4688899887753221111111 11122222
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEE
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTS 632 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 632 (748)
++..++.|+.+ ..+..||..+.+-... ++........+.+ ++.+++.|+.++ .+..||..+.+...
T Consensus 118 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~ 185 (312)
T 4ery_A 118 QSNLIVSGSFD-----ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASGQCLK 185 (312)
T ss_dssp SSSEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCceee
Confidence 56677777755 3588899887653222 2211111222222 567777887644 58889988776433
Q ss_pred ccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEc-cCCCCCCc-ceEE-EEECCEEEEEeCCCC
Q psy10286 633 VKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMI-ASMNVMRS-RVAL-VANMGKLWAIGGYDG 707 (748)
Q Consensus 633 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~-~~~~-~~~~~~l~v~GG~~~ 707 (748)
.-.... ......+.+ +++.++.|+.+ ..+.+||..+.+-... ........ .... ...++.+++.||.++
T Consensus 186 ~~~~~~-~~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 259 (312)
T 4ery_A 186 TLIDDD-NPPVSFVKFSPNGKYILAATLD-----NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 259 (312)
T ss_dssp EECCSS-CCCEEEEEECTTSSEEEEEETT-----TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS
T ss_pred EEeccC-CCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC
Confidence 211111 111222222 56667777654 4788999887653322 11111111 1122 223677777877543
Q ss_pred CCCCCeEEEEeCCCCc
Q psy10286 708 VSNLPTVEVYDPSTDS 723 (748)
Q Consensus 708 ~~~~~~v~~yd~~~~~ 723 (748)
.+.+||..+++
T Consensus 260 -----~i~vwd~~~~~ 270 (312)
T 4ery_A 260 -----LVYIWNLQTKE 270 (312)
T ss_dssp -----CEEEEETTTCC
T ss_pred -----EEEEEECCCch
Confidence 58889987764
No 107
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.13 E-value=0.06 Score=62.78 Aligned_cols=233 Identities=10% Similarity=0.219 Sum_probs=129.7
Q ss_pred eEeecCCCCceeecccc------cc-cc---eEEe-cccc-cccCCCccceEEEEeCCCCceEEccCCC--cc-cceeEE
Q psy10286 440 VEVFDPLVGRWQMAEEE------TL-SN---AVIS-TKSC-LTKAGDSLSTVEVFDPLVGRWQMAEAMS--ML-RSRVGV 504 (748)
Q Consensus 440 ~~~y~~~~~~W~~~~~~------~~-~~---~~~~-~~~~-~~~~g~~~~~~~~yd~~~~~W~~~~~~~--~~-r~~~~~ 504 (748)
+.+||+.++++...... .+ .. +++. ..+. +..+ ....-+.+||+.++++....... .+ ..-.++
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig-t~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i 457 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG-THAGGLSILHRNSGQVENFNQRNSQLVNENVYAI 457 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEE-ETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEE
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEE-eCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEE
Confidence 77889888888665321 11 11 2222 2333 3332 22246899999999887765311 11 111222
Q ss_pred EEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCC--C--CCcc-eeEEEEE-CCEEEEEeCCCCCCCCceEEEEe
Q psy10286 505 AVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPM--C--FKRS-AVGAAAL-NDKLYVCGGYDGVSSLNTVECYE 577 (748)
Q Consensus 505 ~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~--~--~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd 577 (748)
... +|.||+-.. ..+.+||+.+++|+..... + .+.. -.+.... +|.||+... ..+.+||
T Consensus 458 ~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~Gl~~~~ 523 (795)
T 4a2l_A 458 LPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------EGLSVFK 523 (795)
T ss_dssp EECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------SCEEEEE
T ss_pred EECCCCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-------CceEEEe
Confidence 222 567777432 2489999999999887533 1 1111 1222222 678887543 3588999
Q ss_pred CCCCeEEEccCC---C-CCC-cceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEEEcc---CCCCCCcceeEEEE
Q psy10286 578 PDKDQWRIVKSM---Q-KHR-SAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVK---PMLTKRCRLGVAAL 648 (748)
Q Consensus 578 ~~~~~W~~~~~~---~-~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~ 648 (748)
+.++++ ..... + .+- .-.+++. .+|.|++-.. ..+.+||+.+++++... .+|... -.+++.-
T Consensus 524 ~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d 594 (795)
T 4a2l_A 524 QEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILED 594 (795)
T ss_dssp EETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEEC
T ss_pred CCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEEC
Confidence 999888 43211 1 111 1122222 2577777432 24899999999988764 233322 2233322
Q ss_pred -CCEEEEEeccCCCccccEEEEEeCCCCcEEEcc---CCCCCCcce-EEEEE-CCEEEEEeC
Q psy10286 649 -NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIA---SMNVMRSRV-ALVAN-MGKLWAIGG 704 (748)
Q Consensus 649 -~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~-~~~~~-~~~l~v~GG 704 (748)
+|.||+.+. +.+.+||+++.++.... .++...+.. +++.. +|.||+ ||
T Consensus 595 ~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~ 648 (795)
T 4a2l_A 595 SFGRLWLSTN-------RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYF-GG 648 (795)
T ss_dssp TTSCEEEEET-------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEE-EE
T ss_pred CCCCEEEEcC-------CceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEE-ec
Confidence 577888763 46889999999988764 244444332 33333 566665 44
No 108
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.12 E-value=0.069 Score=55.30 Aligned_cols=284 Identities=9% Similarity=0.012 Sum_probs=133.2
Q ss_pred EEEEEcCccCCCCCCcceEeecCCCCceeecccccc---cceEEeccc-ccccCCC---ccce--EEEEeCCCCceEEcc
Q psy10286 423 HIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEETL---SNAVISTKS-CLTKAGD---SLST--VEVFDPLVGRWQMAE 493 (748)
Q Consensus 423 ~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~~---~~~~~~~~~-~~~~~g~---~~~~--~~~yd~~~~~W~~~~ 493 (748)
..+.+|.+......--.++.+|+.++++..+..... ....+..++ .++..+. .... +|.+|..+++.+.+.
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 445567765433333456667888888776543211 111333333 2333322 1123 456666667777665
Q ss_pred CCCcc-cceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCe-EEEc-------cCCCC-----CcceeEEEEE-CC-E
Q psy10286 494 AMSML-RSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRV-WNKV-------SPMCF-----KRSAVGAAAL-ND-K 557 (748)
Q Consensus 494 ~~~~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~-W~~~-------~~~~~-----~r~~~~~~~~-~~-~ 557 (748)
..+.. ..-..++.-++.+|+.+.. ...+..|+..++. ...+ ..-+. ....|+++.. +| .
T Consensus 94 ~~~~~~~~p~~~~~dg~~l~~~~~~-----~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~ 168 (361)
T 3scy_A 94 TQKTMGADPCYLTTNGKNIVTANYS-----GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY 168 (361)
T ss_dssp EEECSSSCEEEEEECSSEEEEEETT-----TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE
T ss_pred EeccCCCCcEEEEECCCEEEEEECC-----CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE
Confidence 44322 2222333333456665432 2467788875432 1110 00011 1112444443 55 4
Q ss_pred EEEEeCCCCCCCCceEEEEeCCCCe-------EEEc-----cCCCCCCcceEEEEE-CC-EEEEEccCCCCcccCeEEEE
Q psy10286 558 LYVCGGYDGVSSLNTVECYEPDKDQ-------WRIV-----KSMQKHRSAGGVIAF-DS-YVYALGGHDGLSIFDSVERY 623 (748)
Q Consensus 558 iyv~GG~~~~~~~~~~~~yd~~~~~-------W~~~-----~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~y 623 (748)
+|+.+.. .+.+..|+..... .... ...+....-..++.. ++ .+|+.+.. .+.+..|
T Consensus 169 l~~~~~~-----~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~~v~v~ 238 (361)
T 3scy_A 169 LLADDLG-----TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-----GGTVIAF 238 (361)
T ss_dssp EEEEETT-----TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----TCEEEEE
T ss_pred EEEEeCC-----CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-----CCeEEEE
Confidence 7776532 2466777655433 2111 111111111223332 44 57776633 2468888
Q ss_pred ECCCCcEEEccC---CCCCCcceeEEEE--CC-EEEEEeccCCCccccEEEEEeC--CCCcEEEccCCCCCCcceEEEEE
Q psy10286 624 DPKTDEWTSVKP---MLTKRCRLGVAAL--NN-KIYVCGGYDGAIFLQSVEMYDP--ITDEWKMIASMNVMRSRVALVAN 695 (748)
Q Consensus 624 d~~~~~W~~~~~---~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~p~~r~~~~~~~~ 695 (748)
|..++++..+.. .+..........+ ++ .||+.+. .+ .+.+.+|+. .+.+++.+...+....-..++..
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~-~~---~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~s 314 (361)
T 3scy_A 239 RYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR-LK---ADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIIT 314 (361)
T ss_dssp EEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC-SS---SCEEEEEEECTTTCCEEEEEEEECSSCCCEEEEC
T ss_pred EecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC-CC---CCEEEEEEEcCCCCcEEEeeEecCCCCCceEEEC
Confidence 888777755542 2322222233333 44 4665543 20 135666554 57777776554432222233333
Q ss_pred -CCE-EEEEeCCCCCCCCCeEEEEeCCCCceEecC
Q psy10286 696 -MGK-LWAIGGYDGVSNLPTVEVYDPSTDSWAFVA 728 (748)
Q Consensus 696 -~~~-l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (748)
+++ ||+.+..++ .-.++.+|+++++-+.+.
T Consensus 315 pdg~~l~~~~~~~~---~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 315 PNGKYLLVACRDTN---VIQIFERDQATGLLTDIK 346 (361)
T ss_dssp TTSCEEEEEETTTT---EEEEEEECTTTCCEEECS
T ss_pred CCCCEEEEEECCCC---CEEEEEEECCCCcEeecc
Confidence 455 555543221 123455788888877765
No 109
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.12 E-value=0.15 Score=52.24 Aligned_cols=255 Identities=11% Similarity=0.171 Sum_probs=121.5
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeeccc---ccccceEEecccccccCCCccceEEEEeCCCCc--eEEccCC
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEE---ETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGR--WQMAEAM 495 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~--W~~~~~~ 495 (748)
++.+++.||.+ .++..||..+++-...-. ..+....+..++.....|..-..+..||..+.. ......+
T Consensus 66 d~~~l~s~s~D------g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~ 139 (340)
T 1got_B 66 DSRLLLSASQD------GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139 (340)
T ss_dssp TSSEEEEEETT------TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEE
T ss_pred CCCEEEEEeCC------CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEe
Confidence 34556666643 257777766554322111 111111222333222223333567778876643 1111111
Q ss_pred Cccc-ceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCce
Q psy10286 496 SMLR-SRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNT 572 (748)
Q Consensus 496 ~~~r-~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 572 (748)
.... .-.++... ++. ++.|+.+ ..+..||..+.+-...-.-... .-.+++.. ++.+++.||.+ ..
T Consensus 140 ~~h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sg~~d-----~~ 207 (340)
T 1got_B 140 AGHTGYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGACD-----AS 207 (340)
T ss_dssp ECCSSCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETT-----SC
T ss_pred cCCCccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCcEEEEEcCCCC-ceEEEEECCCCCEEEEEeCC-----Cc
Confidence 1111 11122222 555 4555533 4688899988764332111111 11222222 67788888865 46
Q ss_pred EEEEeCCCCeEEEccCCCCCCcc-eEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--
Q psy10286 573 VECYEPDKDQWRIVKSMQKHRSA-GGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-- 648 (748)
Q Consensus 573 ~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 648 (748)
+..||..+..-... +...... .+++.. ++..++.|+.++ .+..||..+.+-...-..+........+.+
T Consensus 208 v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 208 AKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATGSDDA-----TCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp EEEEETTTCSEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EEEEECCCCeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCCC-----cEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 78888877653221 1111111 122222 667777887654 588899887653322111111122233333
Q ss_pred CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCCC
Q psy10286 649 NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYDG 707 (748)
Q Consensus 649 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~ 707 (748)
++++++.|+.+ ..+.+||..+..= +..+........++.+ +++.++.||.++
T Consensus 281 ~g~~l~~g~~d-----~~i~vwd~~~~~~--~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 281 SGRLLLAGYDD-----FNCNVWDALKADR--AGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCE--EEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred CCCEEEEECCC-----CeEEEEEcccCcE--eeEeecCCCcEEEEEEcCCCCEEEEEcCCc
Confidence 67788888754 4688999766432 2222111112222222 567777887653
No 110
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.11 E-value=0.081 Score=53.84 Aligned_cols=279 Identities=11% Similarity=0.072 Sum_probs=141.6
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeecccccc--cceEEeccc-ccccCCCccceEEEEeCCCCce--EEccCC
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEETL--SNAVISTKS-CLTKAGDSLSTVEVFDPLVGRW--QMAEAM 495 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~~--~~~~~~~~~-~~~~~g~~~~~~~~yd~~~~~W--~~~~~~ 495 (748)
.+.+|+.++.. ..+..||+.+++......... ....+..++ .++..+.....++.+|+.+++. ..+..-
T Consensus 9 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 9 SNFGIVVEQHL------RRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp CCEEEEEEGGG------TEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred CCEEEEEecCC------CeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 35677776542 368899998888755432211 122333333 3554444456899999988874 222222
Q ss_pred CcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CC-EEEEEeCCCCCCCCce-
Q psy10286 496 SMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-ND-KLYVCGGYDGVSSLNT- 572 (748)
Q Consensus 496 ~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~- 572 (748)
..++...+...-++.+| .+... .....+++||+.+++....-+ .....++++.. +| .+|+.+..+ ..
T Consensus 83 ~~~~~~~~~s~dg~~l~-~~~~~--~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~-----~~~ 152 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAV-TVTGL--NHPFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDRSS-----ANT 152 (331)
T ss_dssp SSCCCCEEECTTSSEEE-ECCCS--SSSCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEETT-----TTE
T ss_pred CCCccceEECCCCCEEE-EecCC--CCcccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEecCC-----Cce
Confidence 22222122211244566 33321 112379999999887654322 22223444444 44 588776532 23
Q ss_pred EEEEeCCCCe--EEE-ccCCCCCCcceEEEEE-CC-EEEEEccCCCCcccCeEEEEECCCCcE-EEccCCCCCCcceeEE
Q psy10286 573 VECYEPDKDQ--WRI-VKSMQKHRSAGGVIAF-DS-YVYALGGHDGLSIFDSVERYDPKTDEW-TSVKPMLTKRCRLGVA 646 (748)
Q Consensus 573 ~~~yd~~~~~--W~~-~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~ 646 (748)
+..|+...+. ... ...++....-..++.. ++ .+|+.+.. .+.+..||+.+.+. ..+..++......+++
T Consensus 153 i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~ 227 (331)
T 3u4y_A 153 VRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI-----GNSIGILETQNPENITLLNAVGTNNLPGTIV 227 (331)
T ss_dssp EEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT-----TTEEEEEECSSTTSCEEEEEEECSSCCCCEE
T ss_pred EEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC-----CCeEEEEECCCCcccceeeeccCCCCCceEE
Confidence 5666654321 111 1111111112233332 44 57777654 24799999987764 1122222222222333
Q ss_pred EE-CCE-EEEEeccCCCccccEEEEEeCCCCcEEEccCCCC-----CCcce---EEEE-EC-CEEEEEeCCCCCCCCCeE
Q psy10286 647 AL-NNK-IYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNV-----MRSRV---ALVA-NM-GKLWAIGGYDGVSNLPTV 714 (748)
Q Consensus 647 ~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-----~r~~~---~~~~-~~-~~l~v~GG~~~~~~~~~v 714 (748)
.. +++ +|+..+. .+.+.++|+.+.+...+...+. ++... .++. -+ ..||+.++. ...+
T Consensus 228 ~spdg~~l~v~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~~v 297 (331)
T 3u4y_A 228 VSRDGSTVYVLTES-----TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI-----SREL 297 (331)
T ss_dssp ECTTSSEEEEECSS-----EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT-----TTEE
T ss_pred ECCCCCEEEEEEcC-----CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC-----CCcE
Confidence 33 444 6666532 2568999999988755432221 12111 1222 23 456666542 2479
Q ss_pred EEEeCCCCceEecCCC
Q psy10286 715 EVYDPSTDSWAFVAPM 730 (748)
Q Consensus 715 ~~yd~~~~~W~~~~~~ 730 (748)
.+||..+..=..+..+
T Consensus 298 ~v~d~~~~~~~~~~~~ 313 (331)
T 3u4y_A 298 KVFTISGKVVGYVAGI 313 (331)
T ss_dssp EEEETTSCEEEECTTC
T ss_pred EEEEecCCcccceecc
Confidence 9999988765555544
No 111
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.10 E-value=0.00057 Score=63.20 Aligned_cols=98 Identities=14% Similarity=0.273 Sum_probs=73.2
Q ss_pred cEEEEECCeEEeeeeeeeeccC-HHHHHhhcccccccccceeeeecchheehhhccccccccccccccccccceeeeecC
Q psy10286 76 DVTIKVDDQSFTCHRIVLAATI-PYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQG 154 (748)
Q Consensus 76 Dv~i~~~~~~~~aHk~iL~a~S-~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 154 (748)
=|+|.|+|+.|...+..|.... .+|.+||.+...-. . + .....++-+ +
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~------~----------------------~--~De~geyFI-D 61 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLD------S----------------------D--KDETGAYLI-D 61 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----------------------------------BCTTCCEEE-C
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccC------c----------------------c--cCCCccEEe-c
Confidence 3677899999999999997653 37888886532100 0 0 001122222 5
Q ss_pred CCHHHHHHHHHhhhceeEEeech-hHHHHHHHHHHhcchhHHHHHHHHhhh
Q psy10286 155 IDAVAMEALINFVYSGRVTIHSQ-NVQSLMVVASFLQMQKVADACADFLKK 204 (748)
Q Consensus 155 ~~~~~~~~~l~flYtg~~~i~~~-~v~~ll~~A~~l~i~~l~~~c~~~l~~ 204 (748)
-++..|+.+|+|+-+|.+.++.+ ....++.-|++|+|+.|.+.|.+.|.+
T Consensus 62 RDP~~F~~ILnyLRtG~L~lP~~~~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 62 RDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp SCSTTHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHhcCCccCCCCCCCHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 68999999999999999987665 457899999999999999999999865
No 112
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.06 E-value=0.011 Score=61.72 Aligned_cols=231 Identities=14% Similarity=0.172 Sum_probs=112.0
Q ss_pred ccceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCe-EEEccCCCCCcceeEE
Q psy10286 475 SLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRV-WNKVSPMCFKRSAVGA 551 (748)
Q Consensus 475 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~r~~~~~ 551 (748)
.-..+..||..++.|..+..+.........+.. ++..++.|+.+ ..+..||..+.. |.....+........+
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 105 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWKQTLVLLRLNRAATF 105 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCCCEEECCCCSSCEEE
T ss_pred CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCceeeeeEecccCCceEE
Confidence 345678888888888877766543333333333 56677777754 357888888766 4433222222222222
Q ss_pred EEE--CCEEEEEeCCCCCCCCceEEEEeCCCCe-EEEccCCCC-CCcc-eEEEEE-CCEEEEEccCCCCcccCeEEEEEC
Q psy10286 552 AAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQ-WRIVKSMQK-HRSA-GGVIAF-DSYVYALGGHDGLSIFDSVERYDP 625 (748)
Q Consensus 552 ~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~~-~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~ 625 (748)
+.+ +++.++.|+.+ ..+..||..+.+ |.....+.. .... .+++.. ++..++.|+.++ .+..||.
T Consensus 106 ~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~ 175 (377)
T 3dwl_C 106 VRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR-----KAYVLSA 175 (377)
T ss_dssp EECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS-----CEEEEEE
T ss_pred EEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC-----EEEEEEE
Confidence 222 56677777754 357778877664 333322322 1111 222222 567777777643 4777876
Q ss_pred CCCc----------------EEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcE--EEccCCCC
Q psy10286 626 KTDE----------------WTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEW--KMIASMNV 685 (748)
Q Consensus 626 ~~~~----------------W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W--~~~~~~p~ 685 (748)
.+.. -..+..+ ........+.+ +++.++.|+.+ ..+.+||..+.+- ..+..+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~ 249 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHD-----SSVTIAYPSAPEQPPRALITVKL 249 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETT-----TEEC-CEECSTTSCEEECCCEEC
T ss_pred EecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCC-----CcEEEEECCCCCCcceeeEeecC
Confidence 5332 1222222 11111223333 56777777754 3677788766542 21222222
Q ss_pred CCcce-EE-EEECCEEEEEeCCCCCCCCCeEEEEeCCCCceEecCCCCC
Q psy10286 686 MRSRV-AL-VANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFVAPMCA 732 (748)
Q Consensus 686 ~r~~~-~~-~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 732 (748)
..... ++ ..-++++++.|+. ..+.+|+.....|+....+..
T Consensus 250 ~~~~v~~~~~s~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~ 292 (377)
T 3dwl_C 250 SQLPLRSLLWANESAIVAAGYN------YSPILLQGNESGWAHTRDLDA 292 (377)
T ss_dssp SSSCEEEEEEEETTEEEEEESS------SSEEEECCCC---CCSBCCCS
T ss_pred CCCceEEEEEcCCCCEEEEEcC------CcEEEEEeCCCceEEEeeecc
Confidence 22212 22 2337887777652 245688888777877666543
No 113
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.05 E-value=0.00019 Score=60.06 Aligned_cols=86 Identities=14% Similarity=0.164 Sum_probs=51.5
Q ss_pred EeechhHHHHHHHHHHhcchhHHHHHHHHhhhcccCCcccchhhhhhhhHHHHHHHhhcceeEEEecccHHHHHHHhhhc
Q psy10286 173 TIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNVLDYYVLFSCRAMEALINFAYSGRVTIHSQNVQSLMVVASFL 252 (748)
Q Consensus 173 ~i~~~~v~~ll~~A~~l~i~~l~~~c~~~l~~~l~~~ncl~i~~~~~~~~~~~ll~~~y~~~~~~~~~~~~~l~~~a~~~ 252 (748)
.++.+|...++..|+.|++++|.+.|..|+.+ ||.++....+|+
T Consensus 7 ~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~------------------------------------nF~~v~~~~eFl 50 (105)
T 2eqx_A 7 GVQVGNCLQVMWLADRHSDPELYTAAKHCAKT------------------------------------HLAQLQNTEEFL 50 (105)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHH------------------------------------TCHHHHTSHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------------------------HHHHHHhcccHh
Confidence 35566667777777777777777777666655 566676666666
Q ss_pred CcHHHHHHHHHHHhhcCCCCCcchHHHHHhhcCchHHHHHHHHHHHH-------hhhhhccCccc
Q psy10286 253 QMQKVADACADFLKKRFHPNNVLGIRQFADTLNCLQLSEAADKYVQQ-------YFHEVSMSDEF 310 (748)
Q Consensus 253 ~l~~l~~~c~~~l~~~l~~~n~~~i~~~a~~~~~~~l~~~~~~~i~~-------~~~~l~~~~~f 310 (748)
.|+. +...+.|.. +.....++++++++|+.+ |+.++++++++
T Consensus 51 ~L~~--~~L~~lL~s--------------dv~~E~~vf~av~~Wv~~d~~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 51 HLPH--RLLTDIISD--------------GVPCSQNPTEAIEAWINFNKEEREAFAESLRTSLKE 99 (105)
T ss_dssp HSCH--HHHHHHHHT--------------CEETTSCHHHHHHHHHHTTHHHHHHHHHHHHHHCCE
T ss_pred hCCH--HHHHHHHcC--------------CCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 5541 112222321 122445799999999974 44555555443
No 114
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.04 E-value=0.31 Score=52.23 Aligned_cols=267 Identities=13% Similarity=0.147 Sum_probs=136.8
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeec-cc--ccccceEEecccccccCCCccceEEEEeCCCCceEEc-cCCC
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMA-EE--ETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMA-EAMS 496 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~-~~--~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~-~~~~ 496 (748)
++..++.|+.+ .++..||..+++-... .. ..+....+..++ ....|..-..+..+|..+++-... ....
T Consensus 131 ~~~~l~sgs~d------g~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~ 203 (464)
T 3v7d_B 131 EDNYVITGADD------KMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHN 203 (464)
T ss_dssp ETTEEEEEETT------SCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred CCCEEEEEcCC------CcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCC
Confidence 34456666543 2578888766553221 11 111111222233 222333345688889887754322 1111
Q ss_pred cccceeEEEEE---CCEEEEEccCCCCCCCCeEEEEECCCCeEEEcc---------------------CCCCCcceeEEE
Q psy10286 497 MLRSRVGVAVM---KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVS---------------------PMCFKRSAVGAA 552 (748)
Q Consensus 497 ~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~---------------------~~~~~r~~~~~~ 552 (748)
.+- .++... ++..++.|+.+ ..+..||..+..-.... .+........+.
T Consensus 204 ~~v--~~l~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 276 (464)
T 3v7d_B 204 STV--RCLDIVEYKNIKYIVTGSRD-----NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV 276 (464)
T ss_dssp SCE--EEEEEEESSSCEEEEEEETT-----SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE
T ss_pred Ccc--EEEEEecCCCCCEEEEEcCC-----CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE
Confidence 111 222222 45777777754 35777777665321100 000011111222
Q ss_pred EECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 553 ALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 553 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
..++..++.|+.+ ..+..||..+.+-...-.... ..-.+++.. ++..++.|+.++ .+..||..+.+-.
T Consensus 277 ~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 277 SGHGNIVVSGSYD-----NTLIVWDVAQMKCLYILSGHT-DRIYSTIYDHERKRCISASMDT-----TIRIWDLENGELM 345 (464)
T ss_dssp EEETTEEEEEETT-----SCEEEEETTTTEEEEEECCCS-SCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEE
T ss_pred cCCCCEEEEEeCC-----CeEEEEECCCCcEEEEecCCC-CCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCcEE
Confidence 3455666777754 368889988766432211111 111222222 556677777643 5889998876533
Q ss_pred EccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCCC
Q psy10286 632 SVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSNL 711 (748)
Q Consensus 632 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~ 711 (748)
. .+...........+++..++.|+.+ ..+.+||..+..-..... ........+...++++++.|+ +
T Consensus 346 ~--~~~~h~~~v~~~~~~~~~l~s~s~d-----g~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-d----- 411 (464)
T 3v7d_B 346 Y--TLQGHTALVGLLRLSDKFLVSAAAD-----GSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-E----- 411 (464)
T ss_dssp E--EECCCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-T-----
T ss_pred E--EEeCCCCcEEEEEEcCCEEEEEeCC-----CcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-C-----
Confidence 2 2222233344555667777888764 368899988765322211 112223344455777777776 2
Q ss_pred CeEEEEeCCCCceEe
Q psy10286 712 PTVEVYDPSTDSWAF 726 (748)
Q Consensus 712 ~~v~~yd~~~~~W~~ 726 (748)
..+.+||..+++--.
T Consensus 412 g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 412 NQFNIYNLRSGKLVH 426 (464)
T ss_dssp TEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEEe
Confidence 369999998887543
No 115
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.02 E-value=0.16 Score=52.31 Aligned_cols=233 Identities=11% Similarity=0.081 Sum_probs=112.6
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeecccc-----cccceEEecccccccCCCccceEEEEeCCCCceEEccCC
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEE-----TLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAM 495 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~ 495 (748)
++.++++|+.+ ..+..||..++.|...... .+....+..++.....+..-..+..||..++++.....+
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 92 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI 92 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEEC
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEe
Confidence 34566666642 3688888888865443321 111222333333222233335688889888877654333
Q ss_pred Cccccee-EEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCe-EEEccCC--CCCcceeEEEEE-CCEEEEEeCCCCCCC
Q psy10286 496 SMLRSRV-GVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRV-WNKVSPM--CFKRSAVGAAAL-NDKLYVCGGYDGVSS 569 (748)
Q Consensus 496 ~~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~-W~~~~~~--~~~r~~~~~~~~-~~~iyv~GG~~~~~~ 569 (748)
....... +++.. ++..++.|+.++ .+..||..+.. |...... +....-.+++.. ++..++.|+.+
T Consensus 93 ~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---- 163 (372)
T 1k8k_C 93 LRINRAARCVRWAPNEKKFAVGSGSR-----VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD---- 163 (372)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS-----SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT----
T ss_pred ecCCCceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC----
Confidence 2222222 22322 566777777542 35555554432 3222211 112222233332 66777777754
Q ss_pred CceEEEEeCCCC----------------eEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 570 LNTVECYEPDKD----------------QWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 570 ~~~~~~yd~~~~----------------~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
..+..||.... .-..+..+.........+.+ ++..++.|+.+ ..+..||..+.+-.
T Consensus 164 -g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 164 -FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD-----STVCLADADKKMAV 237 (372)
T ss_dssp -SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-----TEEEEEEGGGTTEE
T ss_pred -CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcee
Confidence 35777885311 11111112111111222222 55666677654 36888998766533
Q ss_pred EccCCCCCCcc-eeEE-EECCEEEEEeccCCCccccEEEEEeCCC--CcEEEccC
Q psy10286 632 SVKPMLTKRCR-LGVA-ALNNKIYVCGGYDGAIFLQSVEMYDPIT--DEWKMIAS 682 (748)
Q Consensus 632 ~~~~~p~~r~~-~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~--~~W~~~~~ 682 (748)
.. +...... .+++ .-++.+++.| .+ ..+.+||..+ ++|..+..
T Consensus 238 ~~--~~~~~~~v~~~~~~~~~~~l~~~-~d-----~~i~i~~~~~~~~~~~~~~~ 284 (372)
T 1k8k_C 238 AT--LASETLPLLAVTFITESSLVAAG-HD-----CFPVLFTYDSAAGKLSFGGR 284 (372)
T ss_dssp EE--EECSSCCEEEEEEEETTEEEEEE-TT-----SSCEEEEEETTTTEEEECCC
T ss_pred EE--EccCCCCeEEEEEecCCCEEEEE-eC-----CeEEEEEccCcCceEEEeec
Confidence 22 1111111 2222 2367766665 33 3456677766 88877643
No 116
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.13 Score=51.48 Aligned_cols=191 Identities=13% Similarity=0.204 Sum_probs=93.0
Q ss_pred ECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 507 MKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 507 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
.++..++.|+.+ ..+..||.....+.... -..+.........++..++.|+.+ ..+..||..... ...
T Consensus 112 ~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~-~~~ 179 (313)
T 3odt_A 112 FQDGVVISGSWD-----KTAKVWKEGSLVYNLQA-HNASVWDAKVVSFSENKFLTASAD-----KTIKLWQNDKVI-KTF 179 (313)
T ss_dssp EETTEEEEEETT-----SEEEEEETTEEEEEEEC-CSSCEEEEEEEETTTTEEEEEETT-----SCEEEEETTEEE-EEE
T ss_pred ecCCEEEEEeCC-----CCEEEEcCCcEEEeccc-CCCceeEEEEccCCCCEEEEEECC-----CCEEEEecCceE-EEE
Confidence 356666777644 35778883332222221 111111111122256667777754 357778833222 122
Q ss_pred cCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccc
Q psy10286 587 KSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFL 664 (748)
Q Consensus 587 ~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~ 664 (748)
...........+..-++. ++.|+.+ ..+..||..+.+-... +.........+.+ +++ ++.||.+
T Consensus 180 ~~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~-l~~~~~d----- 245 (313)
T 3odt_A 180 SGIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGDVLRT--YEGHESFVYCIKLLPNGD-IVSCGED----- 245 (313)
T ss_dssp CSSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSC-EEEEETT-----
T ss_pred eccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchhhhhh--hhcCCceEEEEEEecCCC-EEEEecC-----
Confidence 111111222222233667 6667664 3688999887653221 1111122222222 444 5566643
Q ss_pred cEEEEEeCCCCcEEEccCCCCCCcceEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCCCCceEecCCC
Q psy10286 665 QSVEMYDPITDEWKMIASMNVMRSRVALVA-NMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFVAPM 730 (748)
Q Consensus 665 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 730 (748)
..+.+||..+.+....-..+... -.++.. -+++ ++.||.+ ..+.+||..++.|.....+
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~-~~~~~~d-----g~i~iw~~~~~~~~~~~~~ 305 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPAIS-IWSVDCMSNGD-IIVGSSD-----NLVRIFSQEKSRWASEDEI 305 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSSSC-EEEEEECTTSC-EEEEETT-----SCEEEEESCGGGCCC----
T ss_pred CEEEEEECCCCceeEEEeccCce-EEEEEEccCCC-EEEEeCC-----CcEEEEeCCCCceeehhhh
Confidence 47899999887654432222221 122222 2566 4556644 3699999999887655443
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.96 E-value=0.032 Score=59.71 Aligned_cols=212 Identities=17% Similarity=0.218 Sum_probs=116.0
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECC
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALND 556 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~ 556 (748)
..+..||..+.+-... +........+...++.+++.|+.+ ..+..||..+++-... +........+...++
T Consensus 153 g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~ 223 (435)
T 1p22_A 153 NTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSD-----STVRVWDVNTGEMLNT--LIHHCEAVLHLRFNN 223 (435)
T ss_dssp SCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETT-----SCEEEEESSSCCEEEE--ECCCCSCEEEEECCT
T ss_pred CeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCC-----CeEEEEECCCCcEEEE--EcCCCCcEEEEEEcC
Confidence 4678888877654322 111122223333377888888855 3588899888764332 111222233344455
Q ss_pred EEEEEeCCCCCCCCceEEEEeCCCCeEEE-ccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccC
Q psy10286 557 KLYVCGGYDGVSSLNTVECYEPDKDQWRI-VKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKP 635 (748)
Q Consensus 557 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 635 (748)
..++.||.+ ..+..||..+..-.. ...+........++..++..++.|+.+ ..+..||..+.+-...
T Consensus 224 ~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~-- 291 (435)
T 1p22_A 224 GMMVTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD-----RTIKVWNTSTCEFVRT-- 291 (435)
T ss_dssp TEEEEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTTCCEEEE--
T ss_pred CEEEEeeCC-----CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCcCcEEEE--
Confidence 667777754 467888887654211 111111122223333466666677664 3688999887653322
Q ss_pred CCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEE
Q psy10286 636 MLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVE 715 (748)
Q Consensus 636 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~ 715 (748)
+........+...++..++.|+.+ ..+.+||..+.+-.. .+........++..++..++.|+.++ .|.
T Consensus 292 ~~~~~~~v~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~~~~l~sg~~dg-----~i~ 359 (435)
T 1p22_A 292 LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLR--VLEGHEELVRCIRFDNKRIVSGAYDG-----KIK 359 (435)
T ss_dssp EECCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEE--EECCCSSCEEEEECCSSEEEEEETTS-----CEE
T ss_pred EcCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCCCCEEE--EEeCCcCcEEEEEecCCEEEEEeCCC-----cEE
Confidence 222222334444567777888754 368899988764322 22222223344445888888888553 577
Q ss_pred EEeCCC
Q psy10286 716 VYDPST 721 (748)
Q Consensus 716 ~yd~~~ 721 (748)
+||..+
T Consensus 360 vwd~~~ 365 (435)
T 1p22_A 360 VWDLVA 365 (435)
T ss_dssp EEEHHH
T ss_pred EEECCC
Confidence 787644
No 118
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.96 E-value=0.32 Score=52.17 Aligned_cols=185 Identities=14% Similarity=0.152 Sum_probs=100.6
Q ss_pred ECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEE
Q psy10286 507 MKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRI 585 (748)
Q Consensus 507 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 585 (748)
.++..++.|+.+ ..+..||..+.+-...-..... .-.+++.. ++..++.|+.+ ..+..||..+.+-..
T Consensus 278 ~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 278 GHGNIVVSGSYD-----NTLIVWDVAQMKCLYILSGHTD-RIYSTIYDHERKRCISASMD-----TTIRIWDLENGELMY 346 (464)
T ss_dssp EETTEEEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCcEEEEecCCCC-CEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcEEE
Confidence 355566667654 3588999987764332111111 12223332 56677777754 368899988765322
Q ss_pred ccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCcccc
Q psy10286 586 VKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQ 665 (748)
Q Consensus 586 ~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 665 (748)
.+......-.....++..++.|+.++ .+..||+.+..-..... ........+...++.+++.|+ + .
T Consensus 347 --~~~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-d-----g 412 (464)
T 3v7d_B 347 --TLQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-E-----N 412 (464)
T ss_dssp --EECCCSSCEEEEEECSSEEEEEETTS-----EEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-T-----T
T ss_pred --EEeCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-C-----C
Confidence 22222223344455677777777643 68899988765322211 112223334455777777776 2 4
Q ss_pred EEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeC
Q psy10286 666 SVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDP 719 (748)
Q Consensus 666 ~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~ 719 (748)
.+.+||..+.+-...-..+....-.++...++.+++.|+.++. .-++++|.
T Consensus 413 ~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~---~~i~~ldf 463 (464)
T 3v7d_B 413 QFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQ---SFLEILDF 463 (464)
T ss_dssp EEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTE---EEEEEEEC
T ss_pred eEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCe---EEEEEeec
Confidence 7999999988755432222222223333446666666654432 23555553
No 119
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.95 E-value=0.072 Score=54.84 Aligned_cols=275 Identities=15% Similarity=0.076 Sum_probs=129.7
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeec-cc--ccccceEEecccccccCCCccceEEEEeCCCCceEEccCCCc
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMA-EE--ETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSM 497 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~-~~--~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~ 497 (748)
++..++.|+.++ .+.+||..++.-... .. ..+....+..++.....+..-..+..||..+++....-..+.
T Consensus 43 ~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 116 (369)
T 3zwl_B 43 EGDLLFSCSKDS------SASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPV 116 (369)
T ss_dssp TSCEEEEEESSS------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS
T ss_pred CCCEEEEEeCCC------EEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCC
Confidence 445566666432 477888766554321 11 111122223333222222333568899988876544332222
Q ss_pred ccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCe----EEEccCCCC-------CcceeEEEEE--CCEEEEEeC
Q psy10286 498 LRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRV----WNKVSPMCF-------KRSAVGAAAL--NDKLYVCGG 563 (748)
Q Consensus 498 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~----W~~~~~~~~-------~r~~~~~~~~--~~~iyv~GG 563 (748)
+ -.+++.. ++..++.|+.+.......+..||..+.. +.....-+. ......++.+ +++.++.|+
T Consensus 117 ~--v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 117 P--VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp C--EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred C--eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 1 1222222 5566666654422233467777755432 222111110 1002222222 566677776
Q ss_pred CCCCCCCceEEEEeCCC-CeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCc
Q psy10286 564 YDGVSSLNTVECYEPDK-DQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRC 641 (748)
Q Consensus 564 ~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 641 (748)
.+ ..+..||..+ ..-...-.... ..-.+++.. ++..++.|+.+ ..+..||..+.+....-. ....
T Consensus 195 ~d-----g~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~--~~~~ 261 (369)
T 3zwl_B 195 KD-----GKISKYDVSNNYEYVDSIDLHE-KSISDMQFSPDLTYFITSSRD-----TNSFLVDVSTLQVLKKYE--TDCP 261 (369)
T ss_dssp TT-----SEEEEEETTTTTEEEEEEECCS-SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEE--CSSC
T ss_pred CC-----CEEEEEECCCCcEeEEEEecCC-CceeEEEECCCCCEEEEecCC-----ceEEEEECCCCceeeeec--CCCC
Confidence 54 4688999887 33222111111 111222222 56666777654 368899988766443322 1111
Q ss_pred ceeEEE-ECCEEEEEeccCCCc---------cccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCCCCC
Q psy10286 642 RLGVAA-LNNKIYVCGGYDGAI---------FLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYDGVS 709 (748)
Q Consensus 642 ~~~~~~-~~~~i~v~GG~~~~~---------~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~ 709 (748)
...++. -++..+++|+.++.. ....+..||..+.+=.. .+.........+.+ ++++++.||.++
T Consensus 262 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~dg-- 337 (369)
T 3zwl_B 262 LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIG--RVQGHFGPLNTVAISPQGTSYASGGEDG-- 337 (369)
T ss_dssp EEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEE--EEECCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchh--heecccCcEEEEEECCCCCEEEEEcCCC--
Confidence 112222 245556666543321 11267888877654322 11111222233333 677888887543
Q ss_pred CCCeEEEEeCCCCc
Q psy10286 710 NLPTVEVYDPSTDS 723 (748)
Q Consensus 710 ~~~~v~~yd~~~~~ 723 (748)
.+.+||.+++.
T Consensus 338 ---~v~iw~~~~~~ 348 (369)
T 3zwl_B 338 ---FIRLHHFEKSY 348 (369)
T ss_dssp ---EEEEEEECHHH
T ss_pred ---eEEEEECcccc
Confidence 58888876654
No 120
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.94 E-value=0.1 Score=54.95 Aligned_cols=223 Identities=15% Similarity=0.161 Sum_probs=116.2
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEEC
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALN 555 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~ 555 (748)
..+..||..+++............-.+++.. ++..++.|+.+ ..+..||..+.+....-. .......+...+
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~ 185 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLRTMA--GHQARVGCLSWN 185 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEEC--CCSSCEEEEEEE
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEEEec--CCCCceEEEEEC
Confidence 4688999998887665444322222333333 66677777754 368889988776433221 112222334446
Q ss_pred CEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcc-eEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEc
Q psy10286 556 DKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSA-GGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSV 633 (748)
Q Consensus 556 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 633 (748)
+.+++.|+.+ ..+..||.....-... .+...... .+++.. ++..++.|+.++ .+..||..+.+-...
T Consensus 186 ~~~l~~~~~d-----g~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~ 254 (401)
T 4aez_A 186 RHVLSSGSRS-----GAIHHHDVRIANHQIG-TLQGHSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFT 254 (401)
T ss_dssp TTEEEEEETT-----SEEEEEETTSSSCEEE-EEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEE
T ss_pred CCEEEEEcCC-----CCEEEEecccCcceee-EEcCCCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEE
Confidence 6777777754 4788888874321111 11111111 222222 667778887643 588999887543321
Q ss_pred cCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CC-EEEEEeCCCCCC
Q psy10286 634 KPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MG-KLWAIGGYDGVS 709 (748)
Q Consensus 634 ~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~ 709 (748)
-. .....-.+++.. ++.+++.||-. .-..+.+||..+.+-...-.. ...-.+++.. ++ .+++.+|..+
T Consensus 255 ~~-~~~~~v~~~~~~p~~~~ll~~~~gs---~d~~i~i~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~g~~d-- 326 (401)
T 4aez_A 255 KT-NHNAAVKAVAWCPWQSNLLATGGGT---MDKQIHFWNAATGARVNTVDA--GSQVTSLIWSPHSKEIMSTHGFPD-- 326 (401)
T ss_dssp EC-CCSSCCCEEEECTTSTTEEEEECCT---TTCEEEEEETTTCCEEEEEEC--SSCEEEEEECSSSSEEEEEECTTT--
T ss_pred ec-CCcceEEEEEECCCCCCEEEEecCC---CCCEEEEEECCCCCEEEEEeC--CCcEEEEEECCCCCeEEEEeecCC--
Confidence 11 111111222222 45677777511 124789999887654332111 1111222222 34 4444445332
Q ss_pred CCCeEEEEeCCCCceEec
Q psy10286 710 NLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 710 ~~~~v~~yd~~~~~W~~~ 727 (748)
..+.+||..++.....
T Consensus 327 --g~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 327 --NNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp --CEEEEEEEETTEEEEE
T ss_pred --CcEEEEecCCccceeE
Confidence 3688888887766554
No 121
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.94 E-value=0.063 Score=52.85 Aligned_cols=187 Identities=12% Similarity=0.063 Sum_probs=100.6
Q ss_pred CCEEEE-EccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEE
Q psy10286 508 KNRLYA-FGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRI 585 (748)
Q Consensus 508 ~~~iyv-~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 585 (748)
++.+|+ ..+. ...+.+||+.+.......... ...-++++.. +|++|+..+ + ..+.+||+.+.....
T Consensus 34 ~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~-~-----~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 34 AGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFNG-LYQPQGLAVDGAGTVYVTDF-N-----NRVVTLAAGSNNQTV 101 (270)
T ss_dssp TCCEEEEECSS-----SCEEEEECC-----EECCCCS-CCSCCCEEECTTCCEEEEET-T-----TEEEEECTTCSCCEE
T ss_pred CCCEEEEccCC-----CCcEEEecCCCcccceEeeCC-cCCcceeEECCCCCEEEEcC-C-----CEEEEEeCCCceEee
Confidence 567888 4332 246888998876654433211 1122334443 678998765 2 478999998876544
Q ss_pred ccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CCEEEEEeccCCCcc
Q psy10286 586 VKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIF 663 (748)
Q Consensus 586 ~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~ 663 (748)
..... ...-.+++.. ++.+|+.... ...+.+||..+.......... ...-.+++.- ++++|+....
T Consensus 102 ~~~~~-~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~----- 169 (270)
T 1rwi_B 102 LPFDG-LNYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDNSGNVYVTDTD----- 169 (270)
T ss_dssp CCCCS-CSSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCCS-CCSCCCEEECTTCCEEEEEGG-----
T ss_pred eecCC-cCCCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEeecccc-CCCceeEEEeCCCCEEEEECC-----
Confidence 42211 1112333433 6788887543 246888987766554332111 1112334433 5788887643
Q ss_pred ccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 664 LQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 664 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
.+.+.+||+....-........ ..-.+++.. ++.||+....+ ..+.+||+.+..-
T Consensus 170 ~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~-----~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNT-----NQVVKLLAGSTTS 225 (270)
T ss_dssp GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTT-----SCEEEECTTCSCC
T ss_pred CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEECCC-----CcEEEEcCCCCcc
Confidence 2579999988776544321111 112233333 46888876422 3689999877543
No 122
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=96.94 E-value=0.00021 Score=61.24 Aligned_cols=40 Identities=18% Similarity=0.439 Sum_probs=35.5
Q ss_pred hhHHHHHHHhhcceeE-EEecccHHHHHHHhhhcCcHHHHH
Q psy10286 220 CRAMEALINFAYSGRV-TIHSQNVQSLMVVASFLQMQKVAD 259 (748)
Q Consensus 220 ~~~~~~ll~~~y~~~~-~~~~~~~~~l~~~a~~~~l~~l~~ 259 (748)
...++.+++|+|+|.+ .+..+|+.+++.+|++|+++.|++
T Consensus 75 ~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 75 AEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 4566779999999999 799999999999999999988764
No 123
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.91 E-value=0.38 Score=47.58 Aligned_cols=194 Identities=10% Similarity=0.080 Sum_probs=105.1
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCC----CCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCC
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC----FKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKD 581 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~----~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 581 (748)
++.+|+.+.. ...+.+||+............ ....-.+++.. ++++|+.+... -..+.+||+...
T Consensus 40 ~g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~----~~~i~~~d~~g~ 110 (286)
T 1q7f_A 40 QNDIIVADTN-----NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP----THQIQIYNQYGQ 110 (286)
T ss_dssp TCCEEEEEGG-----GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG----GCEEEEECTTSC
T ss_pred CCCEEEEECC-----CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC----CCEEEEECCCCc
Confidence 5678887542 246889998865444433211 11223445542 68999886421 246889996655
Q ss_pred eEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CCEEEEEeccC
Q psy10286 582 QWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NNKIYVCGGYD 659 (748)
Q Consensus 582 ~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~ 659 (748)
.-........ ..-.+++.. ++.+|+.... ...+.+||+.......+........-.+++.- ++.+|+.+..
T Consensus 111 ~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~- 183 (286)
T 1q7f_A 111 FVRKFGATIL-QHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR- 183 (286)
T ss_dssp EEEEECTTTC-SCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG-
T ss_pred EEEEecCccC-CCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC-
Confidence 4443322111 111233332 6788887653 24799999876654444221111112233332 5789987643
Q ss_pred CCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 660 GAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
.+.|.+||+.......++.......-.+++.- ++++||....++ ..|.+||+....-.
T Consensus 184 ----~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~ 242 (286)
T 1q7f_A 184 ----AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLIS 242 (286)
T ss_dssp ----GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEE
T ss_pred ----CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEE
Confidence 35799999876655555321111112233332 678888865321 26899997655433
No 124
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.90 E-value=0.047 Score=55.57 Aligned_cols=259 Identities=15% Similarity=0.091 Sum_probs=123.4
Q ss_pred ceEeecCCCCceeeccc--c---cccceEEeccc-ccccCCCccceEEEEeCCCCceEEccCCCcc----cceeEEEEE-
Q psy10286 439 TVEVFDPLVGRWQMAEE--E---TLSNAVISTKS-CLTKAGDSLSTVEVFDPLVGRWQMAEAMSML----RSRVGVAVM- 507 (748)
Q Consensus 439 ~~~~y~~~~~~W~~~~~--~---~~~~~~~~~~~-~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~----r~~~~~~~~- 507 (748)
.+..||..+++....-. . ......+..++ .++..+.....++.+|+.+++-...-..+.+ ..-+.++..
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 91 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSP 91 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECC
Confidence 57788877765533211 1 12222333333 3444434446799999988775432222110 011223332
Q ss_pred C-CEEEEEccCC---CCC---CCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CC-EEEEEeCCCCCCCCceEEEEeC
Q psy10286 508 K-NRLYAFGGYN---GSE---RLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-ND-KLYVCGGYDGVSSLNTVECYEP 578 (748)
Q Consensus 508 ~-~~iyv~GG~~---~~~---~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~ 578 (748)
+ +.+|+..+.. ... ....+++||+.+.+....-+... ..++++.. ++ .+|+.+ ..+..||+
T Consensus 92 dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~--------~~i~~~d~ 161 (337)
T 1pby_B 92 DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR--QITMLAWARDGSKLYGLG--------RDLHVMDP 161 (337)
T ss_dssp TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS--SCCCEEECTTSSCEEEES--------SSEEEEET
T ss_pred CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC--CcceeEECCCCCEEEEeC--------CeEEEEEC
Confidence 3 4677764211 011 23689999999877543322221 12233332 44 466652 36899999
Q ss_pred CCCeEEEccCCCC-CCcceEEEEECCEEEEEccCCC-------------C-----cccCeEEEEECCCCcEEEccCCCCC
Q psy10286 579 DKDQWRIVKSMQK-HRSAGGVIAFDSYVYALGGHDG-------------L-----SIFDSVERYDPKTDEWTSVKPMLTK 639 (748)
Q Consensus 579 ~~~~W~~~~~~~~-~r~~~~~~~~~~~iyv~GG~~~-------------~-----~~~~~~~~yd~~~~~W~~~~~~p~~ 639 (748)
.+.+-...-+... ++. .....-+..+|+.+...+ . .....++.+|+.+.+-..+...+..
T Consensus 162 ~~~~~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 240 (337)
T 1pby_B 162 EAGTLVEDKPIQSWEAE-TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD 240 (337)
T ss_dssp TTTEEEEEECSTTTTTT-TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECS
T ss_pred CCCcEeeeeeccccCCC-ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCC
Confidence 8877543222111 110 011111222332221110 0 0011588999998875433211222
Q ss_pred CcceeEEEE-CC-EEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCE-EEEEeCCCCCCCCCeEE
Q psy10286 640 RCRLGVAAL-NN-KIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGK-LWAIGGYDGVSNLPTVE 715 (748)
Q Consensus 640 r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-l~v~GG~~~~~~~~~v~ 715 (748)
....+++.- ++ .+|+. .+.+++||+.+.+-...-.. +..-.+++.. +++ +|+ ++. ...+.
T Consensus 241 ~~~~~~~~s~dg~~l~~~--------~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~-~~~-----~~~i~ 304 (337)
T 1pby_B 241 VFYFSTAVNPAKTRAFGA--------YNVLESFDLEKNASIKRVPL--PHSYYSVNVSTDGSTVWL-GGA-----LGDLA 304 (337)
T ss_dssp SCEEEEEECTTSSEEEEE--------ESEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSCEEEE-ESB-----SSEEE
T ss_pred CceeeEEECCCCCEEEEe--------CCeEEEEECCCCcCcceecC--CCceeeEEECCCCCEEEE-EcC-----CCcEE
Confidence 222223332 33 45554 15899999988754332111 2222333333 444 555 443 24799
Q ss_pred EEeCCCCce
Q psy10286 716 VYDPSTDSW 724 (748)
Q Consensus 716 ~yd~~~~~W 724 (748)
+||+.+++-
T Consensus 305 v~d~~~~~~ 313 (337)
T 1pby_B 305 AYDAETLEK 313 (337)
T ss_dssp EEETTTCCE
T ss_pred EEECcCCcE
Confidence 999988753
No 125
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.014 Score=67.74 Aligned_cols=230 Identities=12% Similarity=0.169 Sum_probs=123.4
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--C--CEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--K--NRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAA 552 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 552 (748)
..+..||...+++..+..+.........+.. + +..++.||.+ ..+..||..+++|..+..+........++
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~~~~~~~~~~~h~~~V~~v 105 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRWSQIAVHAVHSASVNSV 105 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCCcccccccccCCCCCeEEE
Confidence 4677888877777666554433333333333 3 6777788754 35888899899887765544333333333
Q ss_pred EE--C--CEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCC-CCCcceEEEEE--------------CCEEEEEccCCC
Q psy10286 553 AL--N--DKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQ-KHRSAGGVIAF--------------DSYVYALGGHDG 613 (748)
Q Consensus 553 ~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~--------------~~~iyv~GG~~~ 613 (748)
.+ + +.+++.||.+ ..+..||..++.-.....+. .+..-.+++.. ++..++.|+.++
T Consensus 106 ~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg 180 (753)
T 3jro_A 106 QWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (753)
T ss_dssp EECCGGGCSEEEEEETT-----SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTS
T ss_pred EECCCCCCCEEEEEeCC-----CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC
Confidence 33 3 6778888755 36788887765211110000 01111112211 356777777654
Q ss_pred CcccCeEEEEECCCC--cEEEccCCCCCCcceeEEEE--C---CEEEEEeccCCCccccEEEEEeCCCCc--EEE-ccCC
Q psy10286 614 LSIFDSVERYDPKTD--EWTSVKPMLTKRCRLGVAAL--N---NKIYVCGGYDGAIFLQSVEMYDPITDE--WKM-IASM 683 (748)
Q Consensus 614 ~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~-~~~~ 683 (748)
.+..||..+. .+..+..+.........+.+ + +.+++.||.++ .+.+||..+.. +.. +...
T Consensus 181 -----~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg-----~I~iwd~~~~~~~~~~~~~~~ 250 (753)
T 3jro_A 181 -----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCIIWTQDNEQGPWKKTLLKE 250 (753)
T ss_dssp -----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS-----CEEEEEESSSSSCCBCCBSSS
T ss_pred -----eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC-----EEEEecCCCCCCcceeEEecc
Confidence 4667766543 45444333322222333333 4 78888888654 57778876642 211 1111
Q ss_pred CCCCcc-eEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCCC-CceEecCCCC
Q psy10286 684 NVMRSR-VALVA-NMGKLWAIGGYDGVSNLPTVEVYDPST-DSWAFVAPMC 731 (748)
Q Consensus 684 p~~r~~-~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~~ 731 (748)
...... .+++. -+++.++.||.++ .|.+||..+ +.|.....+.
T Consensus 251 ~~~~~~v~~l~~spdg~~l~s~s~Dg-----~I~vwd~~~~~~~~~~~~~~ 296 (753)
T 3jro_A 251 EKFPDVLWRASWSLSGNVLALSGGDN-----KVTLWKENLEGKWEPAGEVH 296 (753)
T ss_dssp SCCSSCCCCEEECTTTCCEEEECSSS-----CEECCBCCSSSCCBCCCCBC
T ss_pred CCCCCceEEEEEcCCCCEEEEEcCCC-----EEEEEecCCCCCcccccccc
Confidence 111111 12222 3677888887543 488888874 5777665543
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.88 E-value=0.057 Score=57.49 Aligned_cols=229 Identities=12% Similarity=-0.011 Sum_probs=125.1
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL- 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~- 554 (748)
..++.+|.....-..+..-.. .-.+.+.. +++.+++++.++ ....++.+|..+++...+...+. ...+.+..
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~--~v~~~~~Spdg~~la~~s~~~--~~~~i~~~d~~tg~~~~l~~~~~--~~~~~~~sp 232 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ--PLMSPAWSPDGSKLAYVTFES--GRSALVIQTLANGAVRQVASFPR--HNGAPAFSP 232 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS--CEEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEEEEECCSS--CEEEEEECT
T ss_pred ceEEEEcCCCCCCEEEeCCCC--cceeeEEcCCCCEEEEEEecC--CCcEEEEEECCCCcEEEeecCCC--cccCEEEcC
Confidence 578888887654444322111 11222222 566556665432 23589999999988776654332 22223332
Q ss_pred CCE-EEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 555 NDK-LYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 555 ~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
+|+ |++.+..++ ...++.||..+++...+...+ .......+ +++..++++..+. ...++.+|..+.+-.
T Consensus 233 dg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~~~~---~~~~~~~~spdg~~l~~~s~~~g--~~~i~~~d~~~~~~~ 304 (415)
T 2hqs_A 233 DGSKLAFALSKTG---SLNLYVMDLASGQIRQVTDGR---SNNTEPTWFPDSQNLAFTSDQAG--RPQVYKVNINGGAPQ 304 (415)
T ss_dssp TSSEEEEEECTTS---SCEEEEEETTTCCEEECCCCS---SCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTSSCCE
T ss_pred CCCEEEEEEecCC---CceEEEEECCCCCEEeCcCCC---CcccceEECCCCCEEEEEECCCC--CcEEEEEECCCCCEE
Confidence 554 554554332 247999999988876654322 11222222 5554444443211 347999999887755
Q ss_pred EccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEE-ECCEEEEEeCCCCC
Q psy10286 632 SVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVA-NMGKLWAIGGYDGV 708 (748)
Q Consensus 632 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~ 708 (748)
.+... .. ....+.+ +++.+++++..+. ...++.+|+.+.+...+.... .....+. -+++.+++++.++.
T Consensus 305 ~l~~~--~~-~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~ 376 (415)
T 2hqs_A 305 RITWE--GS-QNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGM 376 (415)
T ss_dssp ECCCS--SS-EEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETT
T ss_pred EEecC--CC-cccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCC
Confidence 54321 11 1222223 5555555543321 358999999998887764432 2222222 26776667664332
Q ss_pred CCCCeEEEEeCCCCceEecCC
Q psy10286 709 SNLPTVEVYDPSTDSWAFVAP 729 (748)
Q Consensus 709 ~~~~~v~~yd~~~~~W~~~~~ 729 (748)
...++++|..++..+.++.
T Consensus 377 --~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 377 --GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp --EEEEEEEETTSCCEEECCC
T ss_pred --ccEEEEEECCCCcEEEeeC
Confidence 2379999998887776643
No 127
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.86 E-value=0.27 Score=50.32 Aligned_cols=216 Identities=14% Similarity=0.173 Sum_probs=108.5
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCC-CCcceeEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMC-FKRSAVGAA 552 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~-~~r~~~~~~ 552 (748)
..+..+|..+.+-...-+... ..-.+++.. ++...+.||.+ ..+..||..+.. ......+. ....-.++.
T Consensus 77 g~v~iWd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~d-----~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~ 150 (340)
T 1got_B 77 GKLIIWDSYTTNKVHAIPLRS-SWVMTCAYAPSGNYVACGGLD-----NICSIYNLKTREGNVRVSRELAGHTGYLSCCR 150 (340)
T ss_dssp TEEEEEETTTCCEEEEEECSS-SCEEEEEECTTSSEEEEEETT-----CEEEEEETTTCSBSCEEEEEEECCSSCEEEEE
T ss_pred CcEEEEECCCCCcceEeecCC-ccEEEEEECCCCCEEEEEeCC-----CeEEEEECccCCCcceeEEEecCCCccEEEEE
Confidence 467788877665332211111 111222222 66777778754 467888877642 11111111 111111222
Q ss_pred E-ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcc-eEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCc
Q psy10286 553 A-LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSA-GGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDE 629 (748)
Q Consensus 553 ~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 629 (748)
. -++. ++.|+.+ ..+..||..+..-... +...... .+++.. ++.+++.|+.++ .+..||..+..
T Consensus 151 ~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~~ 217 (340)
T 1got_B 151 FLDDNQ-IVTSSGD-----TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREGM 217 (340)
T ss_dssp EEETTE-EEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCS
T ss_pred ECCCCc-EEEEECC-----CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCe
Confidence 2 2556 4455543 4688899888764322 1111111 222222 567788888754 58888987765
Q ss_pred EEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCC
Q psy10286 630 WTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGY 705 (748)
Q Consensus 630 W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~ 705 (748)
-... +.........+.+ ++..++.||.+ ..+.+||..+.+-...-..+........+.. ++++++.|+.
T Consensus 218 ~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 290 (340)
T 1got_B 218 CRQT--FTGHESDINAICFFPNGNAFATGSDD-----ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290 (340)
T ss_dssp EEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred eEEE--EcCCcCCEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC
Confidence 3321 1111111222223 56778888765 3688899877653322111111122233333 6778888875
Q ss_pred CCCCCCCeEEEEeCCCCc
Q psy10286 706 DGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 706 ~~~~~~~~v~~yd~~~~~ 723 (748)
+ ..+.+||..+..
T Consensus 291 d-----~~i~vwd~~~~~ 303 (340)
T 1got_B 291 D-----FNCNVWDALKAD 303 (340)
T ss_dssp T-----SEEEEEETTTCC
T ss_pred C-----CeEEEEEcccCc
Confidence 4 368888876643
No 128
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.078 Score=54.90 Aligned_cols=190 Identities=14% Similarity=0.183 Sum_probs=106.6
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--C--CEEEEEeCCCCCCCCceEEEEeCCCCeE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL--N--DKLYVCGGYDGVSSLNTVECYEPDKDQW 583 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~W 583 (748)
++..++.|+.+ ..+..||....++..+..+......-.++.+ + +.+++.|+.+ ..+..||..++.|
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~ 91 (379)
T 3jrp_A 22 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 91 (379)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEECC-----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCce
Confidence 45666677654 3577788776677665444322222233333 2 6777777765 3688899999988
Q ss_pred EEccCCCCCCcceEEEEE--C--CEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-----------
Q psy10286 584 RIVKSMQKHRSAGGVIAF--D--SYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL----------- 648 (748)
Q Consensus 584 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~----------- 648 (748)
..+..+.........+.+ + +.+++.|+.+ ..+..||..+........+.........+.+
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 777655433333333333 3 5677777764 3688888876632111011111111122222
Q ss_pred ----CCEEEEEeccCCCccccEEEEEeCCCC--cEEEccCCCCCCcceEEEEE--C---CEEEEEeCCCCCCCCCeEEEE
Q psy10286 649 ----NNKIYVCGGYDGAIFLQSVEMYDPITD--EWKMIASMNVMRSRVALVAN--M---GKLWAIGGYDGVSNLPTVEVY 717 (748)
Q Consensus 649 ----~~~i~v~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~l~v~GG~~~~~~~~~v~~y 717 (748)
++..++.|+.++ .+.+||..+. .|..+..+.........+.+ + +++++.||.++ .+.+|
T Consensus 167 ~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg-----~i~iw 236 (379)
T 3jrp_A 167 NGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCIIW 236 (379)
T ss_dssp ---CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----CEEEE
T ss_pred cCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC-----EEEEE
Confidence 367788887654 5777776543 46555444333333333333 4 78888888654 47888
Q ss_pred eCCCC
Q psy10286 718 DPSTD 722 (748)
Q Consensus 718 d~~~~ 722 (748)
|..+.
T Consensus 237 d~~~~ 241 (379)
T 3jrp_A 237 TQDNE 241 (379)
T ss_dssp EESST
T ss_pred eCCCC
Confidence 88775
No 129
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.84 E-value=0.22 Score=50.30 Aligned_cols=212 Identities=12% Similarity=0.070 Sum_probs=112.8
Q ss_pred ccceEEEEeCCCCceEEccCCCccccee-EEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEE
Q psy10286 475 SLSTVEVFDPLVGRWQMAEAMSMLRSRV-GVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAA 552 (748)
Q Consensus 475 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 552 (748)
.-..+..||..+++......+....... +++.. ++..++.|+.+ ..+..||..+.+....-..... .-.+++
T Consensus 117 ~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~~~~~~~~-~i~~~~ 190 (337)
T 1gxr_A 117 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQFQGHTD-GASCID 190 (337)
T ss_dssp SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEE
T ss_pred CCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceeeeeecccC-ceEEEE
Confidence 3357889999888754443332222222 22322 56677777754 3588999988765433221111 122222
Q ss_pred EE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcE
Q psy10286 553 AL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEW 630 (748)
Q Consensus 553 ~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 630 (748)
.. ++..++.|+.+ ..+..||..+.+-...-..+. .-.+++. -++..+++|+.++ .+..||..+.+-
T Consensus 191 ~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~~-----~i~~~~~~~~~~ 258 (337)
T 1gxr_A 191 ISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFTS--QIFSLGYCPTGEWLAVGMESS-----NVEVLHVNKPDK 258 (337)
T ss_dssp ECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSS--CEEEEEECTTSSEEEEEETTS-----CEEEEETTSSCE
T ss_pred ECCCCCEEEEEecC-----CcEEEEECCCCceEeeecCCC--ceEEEEECCCCCEEEEEcCCC-----cEEEEECCCCCe
Confidence 32 66677777754 468899988876433322211 1122332 2566777776543 588999887764
Q ss_pred EEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCEEEEEeCCCC
Q psy10286 631 TSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGKLWAIGGYDG 707 (748)
Q Consensus 631 ~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~ 707 (748)
...... ......+.+ +++.++.|+.+ ..+.+||..+.+-..... ....-.++... +++.++.|+.++
T Consensus 259 ~~~~~~---~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg 328 (337)
T 1gxr_A 259 YQLHLH---ESCVLSLKFAYCGKWFVSTGKD-----NLLNAWRTPYGASIFQSK--ESSSVLSCDISVDDKYIVTGSGDK 328 (337)
T ss_dssp EEECCC---SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSCEEEEEETTS
T ss_pred EEEcCC---ccceeEEEECCCCCEEEEecCC-----CcEEEEECCCCeEEEEec--CCCcEEEEEECCCCCEEEEecCCC
Confidence 433221 111222223 56677777754 478899988776543211 11112222222 567777777543
Q ss_pred CCCCCeEEEEeC
Q psy10286 708 VSNLPTVEVYDP 719 (748)
Q Consensus 708 ~~~~~~v~~yd~ 719 (748)
.+.+||.
T Consensus 329 -----~i~iw~~ 335 (337)
T 1gxr_A 329 -----KATVYEV 335 (337)
T ss_dssp -----CEEEEEE
T ss_pred -----eEEEEEE
Confidence 4666653
No 130
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.038 Score=58.30 Aligned_cols=225 Identities=10% Similarity=0.049 Sum_probs=106.3
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeecccc--cccceEEecccccccCCCccceEEEEeCCCCceEEccCCCcc
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEE--TLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSML 498 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~ 498 (748)
++..++.|+.+ ..+..||........+... .+....+..++.....+..-..+..||..+++....-.....
T Consensus 119 ~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 192 (425)
T 1r5m_A 119 DGNSIVTGVEN------GELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKET 192 (425)
T ss_dssp TSSEEEEEETT------SCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecccc
Confidence 44566666643 2477777433333333221 111122222322222223335688888887765433222111
Q ss_pred c--------------ceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeC
Q psy10286 499 R--------------SRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGG 563 (748)
Q Consensus 499 r--------------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG 563 (748)
. .-.+++...+..++.|+.+ ..+..||..+.+-...-... ...-.+++.. ++..++.|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK-----GAIFVYQITEKTPTGKLIGH-HGPISVLEFNDTNKLLLSAS 266 (425)
T ss_dssp -------------CCCBSCCEEEETTEEEEECGG-----GCEEEEETTCSSCSEEECCC-SSCEEEEEEETTTTEEEEEE
T ss_pred CccceeeccccCCcceeeEEEEcCCCEEEEEcCC-----CeEEEEEcCCCceeeeeccC-CCceEEEEECCCCCEEEEEc
Confidence 1 0222333333446666643 46888998876422111111 1111223333 666777777
Q ss_pred CCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcc
Q psy10286 564 YDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCR 642 (748)
Q Consensus 564 ~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 642 (748)
.+ ..+..||..+.+....-.. ....-.+++.. ++ .++.|+.+ ..+..||..+.+-...- ......
T Consensus 267 ~d-----~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~--~~~~~~ 332 (425)
T 1r5m_A 267 DD-----GTLRIWHGGNGNSQNCFYG-HSQSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLLALS--IVDGVP 332 (425)
T ss_dssp TT-----SCEEEECSSSBSCSEEECC-CSSCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEEEEE--ECTTCC
T ss_pred CC-----CEEEEEECCCCccceEecC-CCccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEeEec--ccCCcc
Confidence 54 3578888776542111110 11112233333 55 66666654 36889998876533321 111122
Q ss_pred eeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCc
Q psy10286 643 LGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDE 676 (748)
Q Consensus 643 ~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 676 (748)
...+.+ ++.+++.|+.+ ..+.+||..+..
T Consensus 333 i~~~~~s~~~~~l~~~~~d-----g~i~i~~~~~~~ 363 (425)
T 1r5m_A 333 IFAGRISQDGQKYAVAFMD-----GQVNVYDLKKLN 363 (425)
T ss_dssp EEEEEECTTSSEEEEEETT-----SCEEEEECHHHH
T ss_pred EEEEEEcCCCCEEEEEECC-----CeEEEEECCCCc
Confidence 223333 56777777754 367788876544
No 131
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.83 E-value=0.15 Score=51.30 Aligned_cols=220 Identities=12% Similarity=0.081 Sum_probs=114.9
Q ss_pred ceEEEEeCCCCceEEccCC---CcccceeEEEEE-C-CEEEEEccCCCCCCCCeEEEEECCCCeEEEc-cCCCCC---cc
Q psy10286 477 STVEVFDPLVGRWQMAEAM---SMLRSRVGVAVM-K-NRLYAFGGYNGSERLSTVEEFDPVRRVWNKV-SPMCFK---RS 547 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~---~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~-~~~~~~---r~ 547 (748)
..+.+||+.++++...... .....-.+++.. + +.+|+.+.. +.+.+||+. ++...+ ...... ..
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD-GTFEEIAKKDSEGRRMQG 118 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-SCEEECCSBCTTSCBCBC
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-CCEEEEEeccCCCccccC
Confidence 5689999988888765421 011122333333 5 788987641 268999998 777665 332211 11
Q ss_pred eeEEEEE-CCEEEEEeCCCC----------CCCCceEEEEeCCCCeEEEcc-CCCCCCcceEEEEE-----CC-EEEEEc
Q psy10286 548 AVGAAAL-NDKLYVCGGYDG----------VSSLNTVECYEPDKDQWRIVK-SMQKHRSAGGVIAF-----DS-YVYALG 609 (748)
Q Consensus 548 ~~~~~~~-~~~iyv~GG~~~----------~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~~~~~-----~~-~iyv~G 609 (748)
-.+++.. +|++|+.....+ ......+++||+. .+..... ....+ ...+.. ++ .+|+..
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP---NGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE---EEEEEEECTTSCEEEEEEEE
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc---ceEEEecccCCCCCEEEEEE
Confidence 2233333 678988754221 1123578999987 5554432 11111 233333 34 577765
Q ss_pred cCCCCcccCeEEEEECC-CCcEEEc---cCCCCC--CcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccC
Q psy10286 610 GHDGLSIFDSVERYDPK-TDEWTSV---KPMLTK--RCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIAS 682 (748)
Q Consensus 610 G~~~~~~~~~~~~yd~~-~~~W~~~---~~~p~~--r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 682 (748)
.. ...+++||+. +.++... ..++.. ..-.+++.- ++.+|+.... .+.+.+||+.+.+....-.
T Consensus 195 ~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-----~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 195 TP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----SSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp TT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-----TTEEEEECTTCBSCSEEEE
T ss_pred CC-----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-----CCEEEEEcCCCCcEeEEEe
Confidence 43 2478899876 4443221 122211 111223322 5788887532 2478999998543221111
Q ss_pred CCCCCcceEEEEE-CCE-EEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 683 MNVMRSRVALVAN-MGK-LWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 683 ~p~~r~~~~~~~~-~~~-l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
.+. ..-.+++.. +++ ||+.+..+ ..+++|++....
T Consensus 265 ~~~-~~~~~i~~~~dg~~l~v~~~~~-----~~l~~~~~~~~g 301 (314)
T 1pjx_A 265 CPF-EKPSNLHFKPQTKTIFVTEHEN-----NAVWKFEWQRNG 301 (314)
T ss_dssp CSS-SCEEEEEECTTSSEEEEEETTT-----TEEEEEECSSCB
T ss_pred CCC-CCceeEEECCCCCEEEEEeCCC-----CeEEEEeCCCCC
Confidence 222 122233322 444 77765422 479999987643
No 132
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.81 E-value=0.35 Score=48.03 Aligned_cols=222 Identities=12% Similarity=0.084 Sum_probs=118.8
Q ss_pred ccceEEEEeCCCCc--eEEccCCCcccceeEEEE-ECCEEEEEccCCCCCCCCeEEEEECCCC--eEEEccCCCCCccee
Q psy10286 475 SLSTVEVFDPLVGR--WQMAEAMSMLRSRVGVAV-MKNRLYAFGGYNGSERLSTVEEFDPVRR--VWNKVSPMCFKRSAV 549 (748)
Q Consensus 475 ~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~r~~~ 549 (748)
.-..+..+|+.+++ |+.-..-. .. .+.+.. -+|.+++.+. +.+..||+ +. .|+...+ .....+
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~-~~-~~~~~~~pdG~ilvs~~-------~~V~~~d~-~G~~~W~~~~~--~~~~~~ 80 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKG-WE-CNSVAATKAGEILFSYS-------KGAKMITR-DGRELWNIAAP--AGCEMQ 80 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTT-CC-CCEEEECTTSCEEEECB-------SEEEEECT-TSCEEEEEECC--TTCEEE
T ss_pred CCCEEEEEECCCCeEEEEeCCCcc-CC-CcCeEECCCCCEEEeCC-------CCEEEECC-CCCEEEEEcCC--CCcccc
Confidence 34567888887775 65443211 12 233333 3788888432 46899999 44 3765442 112233
Q ss_pred EEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCe-EEEcc--CCCCC--CcceEEEEECCEEEEEccCCCCcccCeEEEE
Q psy10286 550 GAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQ-WRIVK--SMQKH--RSAGGVIAFDSYVYALGGHDGLSIFDSVERY 623 (748)
Q Consensus 550 ~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~--~~~~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y 623 (748)
++... +|++++..+.. ...++.+|+..+. |+... ..+.+ .........+|.+++.... ...+.+|
T Consensus 81 ~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----~~~v~~~ 151 (276)
T 3no2_A 81 TARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-----TSEVREI 151 (276)
T ss_dssp EEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-----TTEEEEE
T ss_pred ccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-----CCEEEEE
Confidence 44444 77777764421 2478888986553 54331 11111 1122233346666655443 2468999
Q ss_pred ECCCC-cEEEccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCc--EEEcc-CCCCCCc--ceEEEE-E
Q psy10286 624 DPKTD-EWTSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDE--WKMIA-SMNVMRS--RVALVA-N 695 (748)
Q Consensus 624 d~~~~-~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~-~~p~~r~--~~~~~~-~ 695 (748)
|++-+ .|+.-.. ...+++... ++.+++.++.+ ..+..+|+++.+ |+.-. ..+..+. -.++.. .
T Consensus 152 d~~G~~~w~~~~~----~~~~~~~~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~ 222 (276)
T 3no2_A 152 APNGQLLNSVKLS----GTPFSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ 222 (276)
T ss_dssp CTTSCEEEEEECS----SCCCEEEECTTSCEEEECBTT-----SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT
T ss_pred CCCCCEEEEEECC----CCccceeEcCCCCEEEEeCCC-----CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC
Confidence 98732 3665432 122334444 67888877542 469999999654 66532 2332232 123333 3
Q ss_pred CCEEEEEe--CCCCCC---CCCeEEEEeCCCC-ceEe
Q psy10286 696 MGKLWAIG--GYDGVS---NLPTVEVYDPSTD-SWAF 726 (748)
Q Consensus 696 ~~~l~v~G--G~~~~~---~~~~v~~yd~~~~-~W~~ 726 (748)
+|.+||.. |..... ....++.+|+..+ .|+.
T Consensus 223 ~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~ 259 (276)
T 3no2_A 223 NGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQL 259 (276)
T ss_dssp TSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEE
T ss_pred CCCEEEEeccCccccccccCCceEEEECCCCCEEEEe
Confidence 88999886 543210 1235777777554 4664
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.81 E-value=0.061 Score=53.25 Aligned_cols=229 Identities=10% Similarity=-0.046 Sum_probs=122.0
Q ss_pred ccceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCC-CeEEEccCCCCCcceeEEE
Q psy10286 475 SLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVR-RVWNKVSPMCFKRSAVGAA 552 (748)
Q Consensus 475 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t-~~W~~~~~~~~~r~~~~~~ 552 (748)
.-..++.+|..+++...+..... .-.+++.. +++.+++++. ..++++|..+ .+...+........-..++
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE--LFEAPNWSPDGKYLLLNSE------GLLYRLSLAGDPSPEKVDTGFATICNNDHG 91 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS--CCEEEEECTTSSEEEEEET------TEEEEEESSSCCSCEECCCTTCCCBCSCCE
T ss_pred cceeEEEEeCCCCceeeeccCCc--ceEeeEECCCCCEEEEEcC------CeEEEEeCCCCCCceEeccccccccccceE
Confidence 34578888888877665433211 11222222 5665566541 3799999998 7766654333212212222
Q ss_pred E-ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CC-EEEEEccCCCCcccCeEEEEECCCCc
Q psy10286 553 A-LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DS-YVYALGGHDGLSIFDSVERYDPKTDE 629 (748)
Q Consensus 553 ~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 629 (748)
. -+++.+++++.... ....++.+|..+.....+..... ....+.. ++ .+++.++.++ ...+|.+|..+..
T Consensus 92 ~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~---~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 92 ISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ---VFDIYSMDIDSGV 164 (297)
T ss_dssp ECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT---EEEEEEEETTTCC
T ss_pred ECCCCCEEEEEEeCCC-CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC---ceEEEEEECCCCc
Confidence 2 36666666553321 34678899988776555443221 2222222 34 4555555433 2368888888877
Q ss_pred EEEccCCCCCCcceeEEEE--CCE-EEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeC
Q psy10286 630 WTSVKPMLTKRCRLGVAAL--NNK-IYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGG 704 (748)
Q Consensus 630 W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG 704 (748)
...+...+. ......+ +++ |++.++.++ ...+|.++........+.... .....+.. +++.+++++
T Consensus 165 ~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 165 ETRLTHGEG---RNDGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITDSA---YGDWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp EEECCCSSS---CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCCCS---EEEEEEEECTTSSEEEEEE
T ss_pred ceEcccCCC---ccccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEecCC---cccCCeEECCCCCEEEEEE
Confidence 766643321 1122223 454 444443332 357888888777776664322 11222222 566555554
Q ss_pred CCCCC------CCCeEEEEeCCCCceEec
Q psy10286 705 YDGVS------NLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 705 ~~~~~------~~~~v~~yd~~~~~W~~~ 727 (748)
.++.. ....++++|..+++...+
T Consensus 236 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 236 YDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp EETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred cCCCCCcccccCceEEEEEecCCCCceee
Confidence 43221 124699999998876544
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.81 E-value=0.033 Score=55.27 Aligned_cols=229 Identities=10% Similarity=-0.014 Sum_probs=118.3
Q ss_pred CcceEeecCCCCceeecccc--cccceEEecccccccCCCccceEEEEeCCC-CceEEccCCCcccceeEEEEE-CCEEE
Q psy10286 437 LSTVEVFDPLVGRWQMAEEE--TLSNAVISTKSCLTKAGDSLSTVEVFDPLV-GRWQMAEAMSMLRSRVGVAVM-KNRLY 512 (748)
Q Consensus 437 ~~~~~~y~~~~~~W~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~-~~W~~~~~~~~~r~~~~~~~~-~~~iy 512 (748)
..+++.||..++....+... .+....+..++.....+ ....++.+|..+ ++...+........-.+++.. +++.+
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 99 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLN-SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALY 99 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEE-ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEE
T ss_pred ceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEE-cCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEE
Confidence 35677777777766544321 12222333333221111 135799999998 877766543321211222222 55555
Q ss_pred EEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CC-EEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCC
Q psy10286 513 AFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-ND-KLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQ 590 (748)
Q Consensus 513 v~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 590 (748)
++++.... ....+|.+|..+.+...+..... ....+.. ++ .+++.++.++ ...++.+|..+.....+...+
T Consensus 100 ~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 100 AISDKVEF-GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ---VFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp EEEECTTT-SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT---EEEEEEEETTTCCEEECCCSS
T ss_pred EEEEeCCC-CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC---ceEEEEEECCCCcceEcccCC
Confidence 55553221 34679999988776555543221 2223332 44 4554554332 136777778777766654332
Q ss_pred CCCcceEEEEE-CCE-EEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCc----
Q psy10286 591 KHRSAGGVIAF-DSY-VYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAI---- 662 (748)
Q Consensus 591 ~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~---- 662 (748)
.. ...++.. ++. +++.+..++ ...+|.+++.......+.... .......+ +++.+++++.++..
T Consensus 173 ~~--~~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 173 GR--NDGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITDSA---YGDWFPHPSPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp SC--EEEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCCCS---EEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred Cc--cccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEecCC---cccCCeEECCCCCEEEEEEcCCCCCccc
Confidence 21 1122222 444 554443333 357888988877777664322 11222222 55555555433221
Q ss_pred --cccEEEEEeCCCCcEEEcc
Q psy10286 663 --FLQSVEMYDPITDEWKMIA 681 (748)
Q Consensus 663 --~~~~v~~yd~~~~~W~~~~ 681 (748)
....++.+|..+.+...+.
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEE
T ss_pred ccCceEEEEEecCCCCceeee
Confidence 2357999999888766554
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.79 E-value=0.09 Score=60.23 Aligned_cols=239 Identities=10% Similarity=-0.053 Sum_probs=122.8
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCC-----CeEEEccCCCCCcc----
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVR-----RVWNKVSPMCFKRS---- 547 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t-----~~W~~~~~~~~~r~---- 547 (748)
..++.+|..+++-..+......-...+ ..-+|+..++.. ...++++|..+ ++...+........
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~~~~~~~-~SpdG~~la~~~------~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 173 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNEETASLD-FSPVGDRVAYVR------NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQ 173 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTTCCTTCE-ECTTSSEEEEEE------TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESS
T ss_pred CEEEEEECCCCceEEccCCcccccCCc-CCCCCCEEEEEE------CCeEEEEecCcccccCCCcEEeccCCCCCeEccc
Confidence 678999998887665543322111111 112443333321 14688888877 66555433322210
Q ss_pred ---------eeEEEE-ECCEEEEEeCCCC----------------------------CCCCceEEEEeCCCCeEEEccCC
Q psy10286 548 ---------AVGAAA-LNDKLYVCGGYDG----------------------------VSSLNTVECYEPDKDQWRIVKSM 589 (748)
Q Consensus 548 ---------~~~~~~-~~~~iyv~GG~~~----------------------------~~~~~~~~~yd~~~~~W~~~~~~ 589 (748)
..+.+. -+|+..++++.+. ......++.||..+++-..+...
T Consensus 174 ~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 253 (706)
T 2z3z_A 174 AVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG 253 (706)
T ss_dssp CCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC
T ss_pred chhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC
Confidence 122222 2665555554211 11235789999998876655432
Q ss_pred CCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCC-cEEEccCCCCCCc----ceeEEEE--CCEEEEEeccCC
Q psy10286 590 QKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTD-EWTSVKPMLTKRC----RLGVAAL--NNKIYVCGGYDG 660 (748)
Q Consensus 590 ~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~----~~~~~~~--~~~i~v~GG~~~ 660 (748)
.........+.+ +++..++++.+.......++.+|+.+. .+..+........ ......- ++++++.+..++
T Consensus 254 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g 333 (706)
T 2z3z_A 254 EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG 333 (706)
T ss_dssp SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS
T ss_pred CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC
Confidence 111112122222 555444444433333457999999988 6665532111110 1112233 677666665443
Q ss_pred CccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--C-CEEEEEeCCCCCCCCCeEEEEeCCCCceEecC
Q psy10286 661 AIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--M-GKLWAIGGYDGVSNLPTVEVYDPSTDSWAFVA 728 (748)
Q Consensus 661 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (748)
...+|.+|........+..-.... .....+ + +.|++.+..++ .....++.+|..++..+.+.
T Consensus 334 ---~~~l~~~~~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 334 ---WNHLYLYDTTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEAS-PLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp ---SCEEEEEETTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSSC-TTCBEEEEEETTCCCCEESC
T ss_pred ---ccEEEEEECCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCCC-CceEEEEEEEcCCCCceecc
Confidence 467899997777777764322111 121222 3 45666654322 22347899998887766654
No 136
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.79 E-value=0.16 Score=53.01 Aligned_cols=273 Identities=10% Similarity=-0.022 Sum_probs=133.8
Q ss_pred cceEeecCCCCceeecccccc--cc-eEEecccc-cccCCCccceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEE
Q psy10286 438 STVEVFDPLVGRWQMAEEETL--SN-AVISTKSC-LTKAGDSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYA 513 (748)
Q Consensus 438 ~~~~~y~~~~~~W~~~~~~~~--~~-~~~~~~~~-~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv 513 (748)
..++.+|..++....+..... .. ...+.++. +... .....++.+|..+++-..+...+... ..++..++
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~-~~~~~l~~~d~~~~~~~~~~~~~~~~------~~~g~~l~ 132 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYV-KNELNLMKVDLETLEEQVIYTVDEEW------KGYGTWVA 132 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEE-ETTTEEEEEETTTCCEEEEEECCTTE------EEEEEEEE
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEE-EcCCcEEEEECCCCCcEEEEeccccc------CCCCCEEE
Confidence 467888888877665543211 11 22333332 2111 11236899998887766554433221 11112122
Q ss_pred Ecc-------------CC--C----------CCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCE-EEEEeCCCC
Q psy10286 514 FGG-------------YN--G----------SERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDK-LYVCGGYDG 566 (748)
Q Consensus 514 ~GG-------------~~--~----------~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~-iyv~GG~~~ 566 (748)
+.. .. + ......++.+|+.+++...+..-+ ....+....- ++. |+.... ++
T Consensus 133 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~-~~~~~~~~sp~dg~~l~~~~~-~~ 210 (396)
T 3c5m_A 133 NSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT-AWLGHPIYRPFDDSTVGFCHE-GP 210 (396)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEEC-SC
T ss_pred eccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCC-cccccceECCCCCCEEEEEec-CC
Confidence 110 00 0 023357999999988876654311 1122222222 344 544432 21
Q ss_pred -CCCCceEEEEeCCCCeEEEccCCCCCCcceE-EEEE-CCE-EEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcc
Q psy10286 567 -VSSLNTVECYEPDKDQWRIVKSMQKHRSAGG-VIAF-DSY-VYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCR 642 (748)
Q Consensus 567 -~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~-~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 642 (748)
......++.+|..+..+..+.. ..+..... .+.. +++ |++. +..+......++.+|+.+.+...+...+. ..
T Consensus 211 ~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~-~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~ 286 (396)
T 3c5m_A 211 HDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYV-SYFKGQTDRVIYKANPETLENEEVMVMPP--CS 286 (396)
T ss_dssp SSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEE-EEETTTCCEEEEEECTTTCCEEEEEECCS--EE
T ss_pred CCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEE-ecCCCCccceEEEEECCCCCeEEeeeCCC--CC
Confidence 1122578999998887777654 21111111 2222 454 4444 22211112349999999888777654432 11
Q ss_pred eeEEEE-CCEEEEEeccCC-----------CccccEEEEEeCCCCcEEEccCCCCCC----------cceEEEEECC-EE
Q psy10286 643 LGVAAL-NNKIYVCGGYDG-----------AIFLQSVEMYDPITDEWKMIASMNVMR----------SRVALVANMG-KL 699 (748)
Q Consensus 643 ~~~~~~-~~~i~v~GG~~~-----------~~~~~~v~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~-~l 699 (748)
....- +++++++++... ......++.+|+.+.+...+...+... .......-++ .|
T Consensus 287 -~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 365 (396)
T 3c5m_A 287 -HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGV 365 (396)
T ss_dssp -EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEE
T ss_pred -CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeE
Confidence 22233 677666654321 112368999999888766554322210 1111122244 45
Q ss_pred EEEeCCCCCCCCCeEEEEeCCCCceEec
Q psy10286 700 WAIGGYDGVSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 700 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (748)
++.+...+ ...++.+|..++.++.+
T Consensus 366 ~~~s~~~~---~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 366 LFTSDFEG---VPAIYIADVPESYKHLE 390 (396)
T ss_dssp EEEECTTS---SCEEEEEECCTTCC---
T ss_pred EEEecCCC---CceEEEEEEcccccccc
Confidence 54443322 35799999998887764
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.78 E-value=0.082 Score=60.94 Aligned_cols=283 Identities=8% Similarity=-0.082 Sum_probs=136.2
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeeccccc---------------------------ccceEEecccc-cccC
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEET---------------------------LSNAVISTKSC-LTKA 472 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~---------------------------~~~~~~~~~~~-~~~~ 472 (748)
+++.+++++....+....+++.+|..+++...+.... +....++.++. +...
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 3444444443122223457899999888775543211 22233444433 2211
Q ss_pred CCccceEEEEeCCCC---ceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCc--
Q psy10286 473 GDSLSTVEVFDPLVG---RWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKR-- 546 (748)
Q Consensus 473 g~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r-- 546 (748)
.. ..++.+|..++ .-..+..... .-..++.. +|+..+++.. ..++.+|..+++...+.......
T Consensus 127 ~~--~~i~~~d~~~~~~~~~~~l~~~~~--~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~ 196 (741)
T 2ecf_A 127 LG--GELYLYDLKQEGKAAVRQLTHGEG--FATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQLTADGSTTIG 196 (741)
T ss_dssp ET--TEEEEEESSSCSTTSCCBCCCSSS--CEEEEEECTTSSEEEEEET------TEEEEEETTTTEEEECCCCCCSSEE
T ss_pred eC--CcEEEEECCCCCcceEEEcccCCc--ccccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEeccCCcccee
Confidence 11 68999999887 5444433211 11222222 5654455431 37999999998877664432210
Q ss_pred --------------ceeEEEEECCEEEEEeCCCCC----------------------------CCCceEEEEeCCC-CeE
Q psy10286 547 --------------SAVGAAALNDKLYVCGGYDGV----------------------------SSLNTVECYEPDK-DQW 583 (748)
Q Consensus 547 --------------~~~~~~~~~~~iyv~GG~~~~----------------------------~~~~~~~~yd~~~-~~W 583 (748)
....+..-+|+..+++..++. .....++.+|..+ .+-
T Consensus 197 ~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~ 276 (741)
T 2ecf_A 197 NGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT 276 (741)
T ss_dssp ESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC
T ss_pred ccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce
Confidence 011122225554444432211 0123788889887 664
Q ss_pred EEccCC-CCCCc-ceEEEEECC-EEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCC----cceeEEEECCEEEEEe
Q psy10286 584 RIVKSM-QKHRS-AGGVIAFDS-YVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKR----CRLGVAALNNKIYVCG 656 (748)
Q Consensus 584 ~~~~~~-~~~r~-~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~~~~~i~v~G 656 (748)
..+... ..... ...+. -+| .|++... +.......++.+|+.+.+...+....... ...-+..-++++++.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~-~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~ 354 (741)
T 2ecf_A 277 QWIDLGKEQDIYLARVNW-RDPQHLSFQRQ-SRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSS 354 (741)
T ss_dssp EEECCCSCSSEEEEEEEE-EETTEEEEEEE-ETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEE
T ss_pred EEecCCCCcceEEEEEEe-CCCCEEEEEEe-cccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEe
Confidence 444321 11111 11222 344 4544433 22223467999999998876653222111 1112222367777666
Q ss_pred ccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEE--EECC-EEEEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 657 GYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALV--ANMG-KLWAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 657 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~-~l~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
+.++ ...+|.+|.... +..+..-... -...+ .-++ .|++.+..++ .....+|..+....
T Consensus 355 ~~~g---~~~l~~~~~~~~-~~~l~~~~~~--v~~~~~~s~dg~~l~~~~~~~~-~~~~~l~~~~~~g~ 416 (741)
T 2ecf_A 355 ERTG---FQHLYRIDSKGK-AAALTHGNWS--VDELLAVDEKAGLAYFRAGIES-ARESQIYAVPLQGG 416 (741)
T ss_dssp CTTS---SCEEEEECSSSC-EEESCCSSSC--EEEEEEEETTTTEEEEEECSSC-TTCBEEEEEETTCC
T ss_pred cCCC---ccEEEEEcCCCC-eeeeeecceE--EEeEeEEeCCCCEEEEEEeCCC-CceEEEEEEEcCCC
Confidence 5543 367899997766 6655432111 11222 2244 5665554332 12234666665444
No 138
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.74 E-value=0.23 Score=50.32 Aligned_cols=219 Identities=14% Similarity=0.114 Sum_probs=105.0
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-- 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-- 554 (748)
..+..++........................++..++.|+.+ ..+..||.....-...........-......
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-----KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC-----CeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 456677776665443332222222122222245566667654 3466777765543322221111111122221
Q ss_pred -CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEE
Q psy10286 555 -NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTS 632 (748)
Q Consensus 555 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 632 (748)
.+.+++.||.+ ..+..||..+.+....-.... ..-.+++.. ++.+++.|+.++ .+..||..+.+-..
T Consensus 183 ~~~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~Dg-----~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 183 SSNPIIVSCGWD-----KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDG-----QAMLWDLNEGKHLY 251 (340)
T ss_dssp SSSCEEEEEETT-----SCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTC-----EEEEEETTTTEEEE
T ss_pred CCCcEEEEEcCC-----CEEEEEECCCCceeeEecCCC-CcEEEEEECCCCCEEEEEeCCC-----eEEEEEeccCceee
Confidence 23456666644 357888988776433221111 111122222 567778887654 57888887664322
Q ss_pred ccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEE-ccC-CC-----CCCcceEEEEE--CCEEEEEe
Q psy10286 633 VKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-IAS-MN-----VMRSRVALVAN--MGKLWAIG 703 (748)
Q Consensus 633 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-~~~-~p-----~~r~~~~~~~~--~~~l~v~G 703 (748)
. +.....-..++...+..++.||.+ ..+.+||..+..-.. +.. .. .......++.+ +++.++.|
T Consensus 252 ~--~~~~~~v~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 324 (340)
T 4aow_A 252 T--LDGGDIINALCFSPNRYWLCAATG-----PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 324 (340)
T ss_dssp E--EECSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEE
T ss_pred e--ecCCceEEeeecCCCCceeeccCC-----CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEE
Confidence 2 222222222333334445556543 468888887765332 111 10 01111222222 67778888
Q ss_pred CCCCCCCCCeEEEEeCCCCc
Q psy10286 704 GYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 704 G~~~~~~~~~v~~yd~~~~~ 723 (748)
|.++ .|.+||.++++
T Consensus 325 s~Dg-----~v~iW~~~tGt 339 (340)
T 4aow_A 325 YTDN-----LVRVWQVTIGT 339 (340)
T ss_dssp ETTS-----CEEEEEEEC--
T ss_pred eCCC-----EEEEEeCCCcC
Confidence 8653 58889887764
No 139
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.74 E-value=0.18 Score=57.76 Aligned_cols=280 Identities=12% Similarity=0.053 Sum_probs=141.4
Q ss_pred CcceEeecCCCCceeecccc---------cccceEEeccccccc-----CCCccceEEEEeCCCCceEEccCCCccccee
Q psy10286 437 LSTVEVFDPLVGRWQMAEEE---------TLSNAVISTKSCLTK-----AGDSLSTVEVFDPLVGRWQMAEAMSMLRSRV 502 (748)
Q Consensus 437 ~~~~~~y~~~~~~W~~~~~~---------~~~~~~~~~~~~~~~-----~g~~~~~~~~yd~~~~~W~~~~~~~~~r~~~ 502 (748)
...+|..+...+.|..+-.. .+....++.++.... .|..-..++.+|..+++......++..+. .
T Consensus 93 ~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~-~ 171 (695)
T 2bkl_A 93 KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKY-A 171 (695)
T ss_dssp SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTT-C
T ss_pred EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccc-c
Confidence 34566666666666654321 122233444443322 34434689999999988641112222221 2
Q ss_pred EEEEE-CCEEEEEccCCCC--------CCCCeEEEEECCCCeE--EEccCCCCC-cceeEEEEE-CCEEEEEeCCCCCCC
Q psy10286 503 GVAVM-KNRLYAFGGYNGS--------ERLSTVEEFDPVRRVW--NKVSPMCFK-RSAVGAAAL-NDKLYVCGGYDGVSS 569 (748)
Q Consensus 503 ~~~~~-~~~iyv~GG~~~~--------~~~~~v~~yd~~t~~W--~~~~~~~~~-r~~~~~~~~-~~~iyv~GG~~~~~~ 569 (748)
+.+.. +|+.++++..+.. .....+++++..+..- ..+...+.. ....+.... +|+..+++...+. .
T Consensus 172 ~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~ 250 (695)
T 2bkl_A 172 TPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW-S 250 (695)
T ss_dssp CCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-T
T ss_pred ceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-C
Confidence 22222 6666666554322 2345699999887652 233222222 222233322 5554444432221 2
Q ss_pred CceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCc---EEEccCCCCCCcceeEE
Q psy10286 570 LNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDE---WTSVKPMLTKRCRLGVA 646 (748)
Q Consensus 570 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~ 646 (748)
...++.+|..+..|..+..-.... ...+..+|.+|+....+ .....++.+|..+.. |+.+-+........+..
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~ 326 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEG--APRQRVFEVDPAKPARASWKEIVPEDSSASLLSVS 326 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTT--CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCC--CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEE
Confidence 357888887777787775432211 22223466666654432 124579999987654 87764322122223344
Q ss_pred EECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEE-ECC-EEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 647 ALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVA-NMG-KLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 647 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
..++++++.+..++ ...++.+|+....-..+. ++......++.. -++ .+++... +. ..-.+++.||..+++.
T Consensus 327 ~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~s-s~-~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 327 IVGGHLSLEYLKDA---TSEVRVATLKGKPVRTVQ-LPGVGAASNLMGLEDLDDAYYVFT-SF-TTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EETTEEEEEEEETT---EEEEEEEETTCCEEEECC-CSSSSEECCCBSCTTCSEEEEEEE-ET-TEEEEEEEEETTTCCE
T ss_pred EECCEEEEEEEECC---EEEEEEEeCCCCeeEEec-CCCCeEEEEeecCCCCCEEEEEEc-CC-CCCCEEEEEECCCCcE
Confidence 45888888876554 357888887655444442 121111011111 133 4444321 11 1124789999988877
Q ss_pred EecC
Q psy10286 725 AFVA 728 (748)
Q Consensus 725 ~~~~ 728 (748)
+.+.
T Consensus 401 ~~l~ 404 (695)
T 2bkl_A 401 ELWA 404 (695)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6553
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.73 E-value=0.052 Score=55.32 Aligned_cols=224 Identities=9% Similarity=0.058 Sum_probs=114.0
Q ss_pred ccceEEEEeCCCCceEEccCCCcccceeEEEEE-CC-EEEEEccCCCCCCCCeEEEEECCCCeE--EEccCCCCCcceeE
Q psy10286 475 SLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KN-RLYAFGGYNGSERLSTVEEFDPVRRVW--NKVSPMCFKRSAVG 550 (748)
Q Consensus 475 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W--~~~~~~~~~r~~~~ 550 (748)
....+..||+.+++.......+. ....++.. ++ .+|+.+..+ ..++.+|+.+++. ..+..-..++ ++
T Consensus 18 ~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~--~~ 88 (331)
T 3u4y_A 18 HLRRISFFSTDTLEILNQITLGY--DFVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKVVAIQEGQSSM--AD 88 (331)
T ss_dssp GGTEEEEEETTTCCEEEEEECCC--CEEEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEEEEEEECSSCC--CC
T ss_pred CCCeEEEEeCcccceeeeEEccC--CcceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeEEecccCCCCc--cc
Confidence 34679999999998865543332 11233332 44 588776532 4799999988764 2222222222 21
Q ss_pred EEEE-CC-EEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CC-EEEEEccCCCCcccCe-EEEEEC
Q psy10286 551 AAAL-ND-KLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DS-YVYALGGHDGLSIFDS-VERYDP 625 (748)
Q Consensus 551 ~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~-~~~yd~ 625 (748)
++.. ++ .+| .+...+ ....+..||+.+++....-+. ....+.++.. ++ .+|+.+..+ .. +..|+.
T Consensus 89 ~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~ 158 (331)
T 3u4y_A 89 VDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSS-----ANTVRRFKI 158 (331)
T ss_dssp EEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETT-----TTEEEEEEE
T ss_pred eEECCCCCEEE-EecCCC--CcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCC-----CceEEEEEE
Confidence 2332 44 566 433211 113799999998876443222 2222344443 44 577776542 23 666665
Q ss_pred CCCc-EEEc--cCCCCCCcceeEEEE-CC-EEEEEeccCCCccccEEEEEeCCCCcE-EEccCCCCCCcceEEEEE-CCE
Q psy10286 626 KTDE-WTSV--KPMLTKRCRLGVAAL-NN-KIYVCGGYDGAIFLQSVEMYDPITDEW-KMIASMNVMRSRVALVAN-MGK 698 (748)
Q Consensus 626 ~~~~-W~~~--~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~-~~~ 698 (748)
..+. .... ...+......+++.. ++ .+|+.+.. .+.+.+||+.+.+. ..+..++....-..++.. +++
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 233 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI-----GNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGS 233 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT-----TTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSS
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC-----CCeEEEEECCCCcccceeeeccCCCCCceEEECCCCC
Confidence 4322 1111 111111222233322 44 47777643 25799999987764 112222222222223332 444
Q ss_pred -EEEEeCCCCCCCCCeEEEEeCCCCceEec
Q psy10286 699 -LWAIGGYDGVSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 699 -l~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (748)
+|+..+. ...+.+||+++++.+.+
T Consensus 234 ~l~v~~~~-----~~~i~~~d~~~~~~~~~ 258 (331)
T 3u4y_A 234 TVYVLTES-----TVDVFNFNQLSGTLSFV 258 (331)
T ss_dssp EEEEECSS-----EEEEEEEETTTTEEEEE
T ss_pred EEEEEEcC-----CCEEEEEECCCCceeee
Confidence 6666541 23589999998887443
No 141
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.72 E-value=0.17 Score=51.46 Aligned_cols=210 Identities=16% Similarity=0.142 Sum_probs=109.4
Q ss_pred cceEEEEeCCCCceEE-ccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEE
Q psy10286 476 LSTVEVFDPLVGRWQM-AEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAA 553 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~ 553 (748)
-..+..+|..+++-.. +..-+.. -.+++.. ++..++.|+.+ ..+..||..+.+-...-.. ....-.+++.
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~~~~-~~~~v~~~~~ 172 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVD--AWTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYSLDT-RGKFILSIAY 172 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTC--CCCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEEEEC-SSSCEEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCcc--EEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEEecC-CCceEEEEEE
Confidence 3568888888775432 2111111 1122222 66677777643 4678888877653221111 1111122222
Q ss_pred E-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcc-eEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcE
Q psy10286 554 L-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSA-GGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEW 630 (748)
Q Consensus 554 ~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 630 (748)
. +++.++.|+.+ ..+..||..+.+-... +...... .+++. -++.+++.|+.++ .+..||..+.+.
T Consensus 173 spdg~~lasg~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~dg-----~i~iwd~~~~~~ 240 (321)
T 3ow8_A 173 SPDGKYLASGAID-----GIINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDDG-----YIKIYDVQHANL 240 (321)
T ss_dssp CTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTTS-----CEEEEETTTCCE
T ss_pred CCCCCEEEEEcCC-----CeEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCCC-----eEEEEECCCcce
Confidence 2 67777888765 3688899888764222 1111111 12222 2677778887654 588899887654
Q ss_pred EEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCC
Q psy10286 631 TSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYD 706 (748)
Q Consensus 631 ~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 706 (748)
... +.........+.+ ++..++.||.+ ..+.+||..+.+-.. .+.........+.. +++.++.||.+
T Consensus 241 ~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~--~~~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 241 AGT--LSGHASWVLNVAFCPDDTHFVSSSSD-----KSVKVWDVGTRTCVH--TFFDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp EEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEE--EcCCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCEEEE--EEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 332 1111112222333 56777788765 368889987764322 22112222222333 56677777754
Q ss_pred CCCCCCeEEEEeC
Q psy10286 707 GVSNLPTVEVYDP 719 (748)
Q Consensus 707 ~~~~~~~v~~yd~ 719 (748)
+ .|.+||.
T Consensus 312 ~-----~i~vwd~ 319 (321)
T 3ow8_A 312 Q-----EIHIYDC 319 (321)
T ss_dssp C-----CEEEEEC
T ss_pred C-----eEEEEeC
Confidence 3 4777774
No 142
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.71 E-value=1.3 Score=50.65 Aligned_cols=237 Identities=10% Similarity=0.005 Sum_probs=125.4
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCC-----------CCCCeEEEEECCCCeEE--EccCC
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGS-----------ERLSTVEEFDPVRRVWN--KVSPM 542 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~-----------~~~~~v~~yd~~t~~W~--~~~~~ 542 (748)
..++.+|..+++...... .... ..+.+.. +|+-++++..... .....+++++..+.+.. .+...
T Consensus 151 ~~i~v~d~~tg~~~~~~~-~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~ 228 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVL-ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF 228 (710)
T ss_dssp EEEEEEETTTTEEEEEEE-EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC
T ss_pred EEEEEEECCCCCCCcccc-cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEecc
Confidence 479999999998765421 1111 1122333 5544444433322 23456999999887531 22121
Q ss_pred C-CCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCC------C--eEEEccCCCCCCcceEEEEECCEEEEEccCC
Q psy10286 543 C-FKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDK------D--QWRIVKSMQKHRSAGGVIAFDSYVYALGGHD 612 (748)
Q Consensus 543 ~-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~------~--~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~ 612 (748)
+ .+....+.... +|+..+++...+....+.++.+|..+ . .+..+..-.... .......++.+|+.+..+
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~ 307 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRH 307 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTT
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCC
Confidence 2 22222333332 55544444322222246899999876 4 577665432221 122233467888887643
Q ss_pred CCcccCeEEEEECCCC---cEEEccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCc-EEEccCCCCCC
Q psy10286 613 GLSIFDSVERYDPKTD---EWTSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDE-WKMIASMNVMR 687 (748)
Q Consensus 613 ~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r 687 (748)
+ ....++.+|..+. .|+.+.+-.......++... ++.+++....++ ...++++|+.+++ ...+.. + .
T Consensus 308 ~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~~~g~~~~~l~~-~--~ 379 (710)
T 2xdw_A 308 S--PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV---KNTLQLHDLATGALLKIFPL-E--V 379 (710)
T ss_dssp C--TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT---EEEEEEEETTTCCEEEEECC-C--S
T ss_pred C--CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC---EEEEEEEECCCCCEEEecCC-C--C
Confidence 2 2457999998875 58877433221222334445 778887776544 3578999985554 444432 2 1
Q ss_pred cceEEEEE--CC-EEEEEe-CCCCCCCCCeEEEEeCCCCc--eEec
Q psy10286 688 SRVALVAN--MG-KLWAIG-GYDGVSNLPTVEVYDPSTDS--WAFV 727 (748)
Q Consensus 688 ~~~~~~~~--~~-~l~v~G-G~~~~~~~~~v~~yd~~~~~--W~~~ 727 (748)
.....+.. ++ .+++.. +.. .-.+++.||+.+++ ++.+
T Consensus 380 ~~v~~~~~s~d~~~l~~~~ss~~---~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 380 GSVVGYSGQKKDTEIFYQFTSFL---SPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp SEEEEEECCTTCSEEEEEEECSS---CCCEEEEEETTSSSCCCEEE
T ss_pred ceEEEEecCCCCCEEEEEEeCCC---CCCEEEEEECCCCccceEEe
Confidence 11222222 33 454432 322 23579999998877 6544
No 143
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.70 E-value=0.17 Score=51.19 Aligned_cols=220 Identities=12% Similarity=0.080 Sum_probs=115.2
Q ss_pred cceEEEEeCCCCce----EEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCccee-
Q psy10286 476 LSTVEVFDPLVGRW----QMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAV- 549 (748)
Q Consensus 476 ~~~~~~yd~~~~~W----~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~- 549 (748)
-..+..||..++.. ..+........-.+++.. ++..++.|+.+ ..+..||..+.++.....+.......
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~ 145 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSSAPACY 145 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS-----SEEEEEECCCC--EEEEEEECSSSCEE
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCCcceeeecccCCCceE
Confidence 35678888876542 111111111122222332 56666777643 47889999988754443322222222
Q ss_pred EEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCC
Q psy10286 550 GAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKT 627 (748)
Q Consensus 550 ~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 627 (748)
+++.. +++.++.|+.+ ..+..||..+.+....-..... .-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 146 ~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~ 214 (337)
T 1gxr_A 146 ALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQFQGHTD-GASCIDISNDGTKLWTGGLD-----NTVRSWDLRE 214 (337)
T ss_dssp EEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETT-----SEEEEEETTT
T ss_pred EEEECCCCCEEEEEeCC-----CcEEEEeCCCCceeeeeecccC-ceEEEEECCCCCEEEEEecC-----CcEEEEECCC
Confidence 22222 66677777754 3588999988764333211111 11222222 56667777753 3689999887
Q ss_pred CcEEEccCCCCCCcceeEEE-ECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCEEEEEeCC
Q psy10286 628 DEWTSVKPMLTKRCRLGVAA-LNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGKLWAIGGY 705 (748)
Q Consensus 628 ~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~ 705 (748)
.+-...-.. ...-.+++. -++..+++|+.+ ..+.+||..+..-..+.... ..-.++... ++++++.|+.
T Consensus 215 ~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~-----~~i~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 215 GRQLQQHDF--TSQIFSLGYCPTGEWLAVGMES-----SNVEVLHVNKPDKYQLHLHE--SCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp TEEEEEEEC--SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTSSCEEEECCCS--SCEEEEEECTTSSEEEEEET
T ss_pred CceEeeecC--CCceEEEEECCCCCEEEEEcCC-----CcEEEEECCCCCeEEEcCCc--cceeEEEECCCCCEEEEecC
Confidence 754333221 111222222 256677777654 36888998876544332211 111222222 5677777774
Q ss_pred CCCCCCCeEEEEeCCCCceE
Q psy10286 706 DGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 706 ~~~~~~~~v~~yd~~~~~W~ 725 (748)
+ ..+.+||..++.-.
T Consensus 286 d-----g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 286 D-----NLLNAWRTPYGASI 300 (337)
T ss_dssp T-----SEEEEEETTTCCEE
T ss_pred C-----CcEEEEECCCCeEE
Confidence 3 36889998877544
No 144
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.68 E-value=0.093 Score=54.78 Aligned_cols=280 Identities=10% Similarity=-0.084 Sum_probs=136.1
Q ss_pred cceEeecCCCCceeecccccc---cceEEecccc-cccCCCccceEEEEeCCCCceEEccCCCcccceeEEEE--ECCEE
Q psy10286 438 STVEVFDPLVGRWQMAEEETL---SNAVISTKSC-LTKAGDSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAV--MKNRL 511 (748)
Q Consensus 438 ~~~~~y~~~~~~W~~~~~~~~---~~~~~~~~~~-~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i 511 (748)
..++.+|..++....+..... .....+.++. +... ..-..++.+|..+++-..+...+.......... -++..
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~-~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~ 138 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYV-KDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTK 138 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEE-ETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSE
T ss_pred ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEE-eCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCe
Confidence 468889988887766543221 1223444332 2211 112478999999887766655544332222222 24443
Q ss_pred EEEc---cCC--------------CCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCC-CCCCce
Q psy10286 512 YAFG---GYN--------------GSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDG-VSSLNT 572 (748)
Q Consensus 512 yv~G---G~~--------------~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~-~~~~~~ 572 (748)
++.- +.. .......++.+|+.+.+-..+..-+ ....+....- +|+..++....+ ......
T Consensus 139 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~ 217 (388)
T 3pe7_A 139 LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN-QWLGHPIYRPYDDSTVAFCHEGPHDLVDAR 217 (388)
T ss_dssp EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECSCTTTSSCS
T ss_pred eccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC-ccccccEECCCCCCEEEEEEecCCCCCcce
Confidence 3311 000 0112367999999988765554322 1222333333 555444433221 122468
Q ss_pred EEEEeCCCCeEEEccCCCCCCcceEEEE-ECCE-EEEEccCCCCcccCeEEEEECCCCcEEEccCCCCC------Cccee
Q psy10286 573 VECYEPDKDQWRIVKSMQKHRSAGGVIA-FDSY-VYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTK------RCRLG 644 (748)
Q Consensus 573 ~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~------r~~~~ 644 (748)
++.+|..+.....+............+. -+|+ |+......+. ....++.+|+.+.+-+.+...+.. ....
T Consensus 218 l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~- 295 (388)
T 3pe7_A 218 MWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGS-PDRFIYSADPETLENRQLTSMPACSHLMSNYDGS- 295 (388)
T ss_dssp EEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTC-CCEEEEEECTTTCCEEEEEEECCEEEEEECTTSS-
T ss_pred EEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCC-CcceEEEEecCCCceEEEEcCCCceeeeecCCCC-
Confidence 9999988777666544221111111122 2554 5443322221 112599999999887666543320 0001
Q ss_pred EEEECC-EEEEEe----ccCCCccccEEEEEeCCCCcEEEccCCCCC----------CcceEEEEECCE-EEEEeCCCCC
Q psy10286 645 VAALNN-KIYVCG----GYDGAIFLQSVEMYDPITDEWKMIASMNVM----------RSRVALVANMGK-LWAIGGYDGV 708 (748)
Q Consensus 645 ~~~~~~-~i~v~G----G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~----------r~~~~~~~~~~~-l~v~GG~~~~ 708 (748)
...-++ .|++.. |+.. .....++.+|+.+.+-..+...+.. ........-+++ |++....++
T Consensus 296 ~~spdg~~l~~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g- 373 (388)
T 3pe7_A 296 LMVGDGSDAPVDVQDDSGYKI-ENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHG- 373 (388)
T ss_dssp EEEEEECCC-------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS-
T ss_pred eEccCCCcceeEeeecccccc-CCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCC-
Confidence 122233 333321 1111 1235899999999887776433321 111112223554 554443332
Q ss_pred CCCCeEEEEeCCCCceE
Q psy10286 709 SNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 709 ~~~~~v~~yd~~~~~W~ 725 (748)
...+|.+|.....|+
T Consensus 374 --~~~l~~~~l~~~~~~ 388 (388)
T 3pe7_A 374 --KPALYLATLPESVWK 388 (388)
T ss_dssp --SCEEEEEECCGGGGC
T ss_pred --ceeEEEEECChhccC
Confidence 357999999887763
No 145
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.66 E-value=0.2 Score=51.05 Aligned_cols=230 Identities=8% Similarity=-0.043 Sum_probs=115.9
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEE-ccCCCCCcceeEEEE
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNK-VSPMCFKRSAVGAAA 553 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-~~~~~~~r~~~~~~~ 553 (748)
...+++||+.++++..+...+ ...-.+++.. ++++|+.+.... .....+++||+.+.+... +........-..++.
T Consensus 65 ~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~ 142 (333)
T 2dg1_A 65 EGNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVF 142 (333)
T ss_dssp TCEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEE
T ss_pred CCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEEEEccCccCCcccceEE
Confidence 357899999988877653211 1222333333 678888754221 122579999998876553 222222222223333
Q ss_pred E-CCEEEEEeCCC-CCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CC-EEEEEccCCCCcccCeEEEEECCCC-
Q psy10286 554 L-NDKLYVCGGYD-GVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DS-YVYALGGHDGLSIFDSVERYDPKTD- 628 (748)
Q Consensus 554 ~-~~~iyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~- 628 (748)
. +|++|+..... .......++++|+.+.+...+..- .....+.+.. ++ .+|+.... ...+++||+.++
T Consensus 143 d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~-----~~~i~~~d~~~~g 215 (333)
T 2dg1_A 143 DSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETT-----ANRLHRIALEDDG 215 (333)
T ss_dssp CTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGG-----GTEEEEEEECTTS
T ss_pred CCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCC-----CCeEEEEEecCCC
Confidence 3 67888865421 112245799999987766554211 0111223332 44 58876533 247899998542
Q ss_pred -cEEEcc-----CCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCC-----cceEEEEE-
Q psy10286 629 -EWTSVK-----PMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMR-----SRVALVAN- 695 (748)
Q Consensus 629 -~W~~~~-----~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~- 695 (748)
...... ..+....-.+++.- ++.+|+.... .+.+.+||++...-..+. .+... .-.+++..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~-----~~~v~~~d~~g~~~~~~~-~~~~~~g~~~~~~~~~~~~ 289 (333)
T 2dg1_A 216 VTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG-----QGRVLVFNKRGYPIGQIL-IPGRDEGHMLRSTHPQFIP 289 (333)
T ss_dssp SSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-----TTEEEEECTTSCEEEEEE-CTTGGGTCSCBCCEEEECT
T ss_pred cCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-----CCEEEEECCCCCEEEEEE-cCCCccccccCcceEEECC
Confidence 332211 11111111222322 5778887532 247899998655444442 22110 11222322
Q ss_pred C-CEEEEEeCCCCCCCCCeEEEEeCC
Q psy10286 696 M-GKLWAIGGYDGVSNLPTVEVYDPS 720 (748)
Q Consensus 696 ~-~~l~v~GG~~~~~~~~~v~~yd~~ 720 (748)
+ +.||+.+..........++.+++.
T Consensus 290 dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 290 GTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CCCEEEEEeCccCCCCCceEEEEecc
Confidence 3 477776543221122357777764
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.62 E-value=0.067 Score=55.04 Aligned_cols=229 Identities=10% Similarity=0.085 Sum_probs=112.1
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC-CcceeEEEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF-KRSAVGAAAL 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~-~r~~~~~~~~ 554 (748)
-.+|.+|..+++++.+........-..++.- ++++|+.+... ....++.||..+++++.+..... ...-..++..
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 3578889988888765432222111223322 67788776421 12578999998888766544221 1122233333
Q ss_pred -CC-EEEEEeCCCCCCCCceEEEEeCC-CCeEEEccCC------CCCCc----ceEEEEE-CCEEEEEccCCCCcccCeE
Q psy10286 555 -ND-KLYVCGGYDGVSSLNTVECYEPD-KDQWRIVKSM------QKHRS----AGGVIAF-DSYVYALGGHDGLSIFDSV 620 (748)
Q Consensus 555 -~~-~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~------~~~r~----~~~~~~~-~~~iyv~GG~~~~~~~~~~ 620 (748)
+| .+|+.+..+ ..+..||.. +.+...+... |.+|. -+.++.. ++++|+.+..+ +.+
T Consensus 95 pdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v 164 (347)
T 3hfq_A 95 EARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKV 164 (347)
T ss_dssp TTTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-----TEE
T ss_pred CCCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-----CEE
Confidence 55 577665322 467777764 3344333221 11111 1223332 56677765432 468
Q ss_pred EEEECC-CCcEEEccC--CCCCCcceeEEE-ECC-EEEEEeccCCCccccEEEEE--eCCCCcEEEcc---CCCCC---C
Q psy10286 621 ERYDPK-TDEWTSVKP--MLTKRCRLGVAA-LNN-KIYVCGGYDGAIFLQSVEMY--DPITDEWKMIA---SMNVM---R 687 (748)
Q Consensus 621 ~~yd~~-~~~W~~~~~--~p~~r~~~~~~~-~~~-~i~v~GG~~~~~~~~~v~~y--d~~~~~W~~~~---~~p~~---r 687 (748)
..||.. +.+...+.. .+....-..++. -++ .+|+.+..+ +.+.+| +..+.++..+. ..+.. .
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQTGAFTQLGIVKTIPADYTAH 239 (347)
T ss_dssp EEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETTTTEEEEEEEEESSCTTCCSC
T ss_pred EEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCCCCceEEeeeeeecCCCCCCC
Confidence 888887 555554432 111111112222 245 477765432 344455 44457765543 23321 1
Q ss_pred cceEEEEE--CC-EEEEEeCCCCCCCCCeEEEEeCCC-CceEecC
Q psy10286 688 SRVALVAN--MG-KLWAIGGYDGVSNLPTVEVYDPST-DSWAFVA 728 (748)
Q Consensus 688 ~~~~~~~~--~~-~l~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~ 728 (748)
.....+.+ ++ .||+.+.. .+.+.+||... ++++.+.
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~-----~~~v~v~~~~~~g~~~~~~ 279 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRG-----YNTLAVFAVTADGHLTLIQ 279 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEET-----TTEEEEEEECGGGCEEEEE
T ss_pred CcceeEEECCCCCEEEEEeCC-----CCEEEEEEECCCCcEEEeE
Confidence 12222222 45 47776542 24688888753 3455443
No 147
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.60 E-value=0.55 Score=48.41 Aligned_cols=175 Identities=13% Similarity=0.171 Sum_probs=90.2
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE---CCEEEEEeCCCCCCCCceEEEEeCCCCeEE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL---NDKLYVCGGYDGVSSLNTVECYEPDKDQWR 584 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 584 (748)
++..++.|+.+ ..+..||..+.+-...-.-... .-.+.... ++..++.||.+ ..+..||..+.+..
T Consensus 165 ~~~~l~t~s~D-----~~v~lwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~g~~l~sgs~D-----g~v~~wd~~~~~~~ 233 (354)
T 2pbi_B 165 SDMQILTASGD-----GTCALWDVESGQLLQSFHGHGA-DVLCLDLAPSETGNTFVSGGCD-----KKAMVWDMRSGQCV 233 (354)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTCCEEEEEECCSS-CEEEEEECCCSSCCEEEEEETT-----SCEEEEETTTCCEE
T ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEEEcCCCC-CeEEEEEEeCCCCCEEEEEeCC-----CeEEEEECCCCcEE
Confidence 44455556543 4688899888764322111111 11122221 35677788765 46888998887653
Q ss_pred EccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCC
Q psy10286 585 IVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDG 660 (748)
Q Consensus 585 ~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 660 (748)
..- ......-..+.+ ++..++.|+.++ .+..||..++.-...-...........+.+ ++.+++.|+.+
T Consensus 234 ~~~--~~h~~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d- 305 (354)
T 2pbi_B 234 QAF--ETHESDVNSVRYYPSGDAFASGSDDA-----TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND- 305 (354)
T ss_dssp EEE--CCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-
T ss_pred EEe--cCCCCCeEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC-
Confidence 321 111111222222 567777787654 588899887653322111111222233333 57777777754
Q ss_pred CccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCCC
Q psy10286 661 AIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYDG 707 (748)
Q Consensus 661 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~ 707 (748)
..+.+||..+.+= +..+........++.+ +++.++.|+.++
T Consensus 306 ----~~i~vwd~~~~~~--~~~l~~h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 306 ----YTINVWDVLKGSR--VSILFGHENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp ----SCEEEEETTTCSE--EEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ----CcEEEEECCCCce--EEEEECCCCcEEEEEECCCCCEEEEEcCCC
Confidence 3688899866542 2222212222222333 677777887553
No 148
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.23 Score=50.71 Aligned_cols=196 Identities=18% Similarity=0.274 Sum_probs=98.6
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCC-----eEEEccCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCC
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRR-----VWNKVSPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDK 580 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~-----~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 580 (748)
++.+++.|+.+ ..+..||.... .+..+..+......-.++.+ +++.++.||.+ ..+..||...
T Consensus 69 ~~~~las~s~D-----~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D-----~~v~iwd~~~ 138 (330)
T 2hes_X 69 HTSLLAAGSFD-----STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD-----KSVWIWETDE 138 (330)
T ss_dssp TSSEEEEEETT-----SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT-----SCEEEEECCT
T ss_pred CCCEEEEEeCC-----CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC-----CEEEEEeccC
Confidence 56677777754 34667776432 12222211111111112222 67777777765 3577888742
Q ss_pred --CeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--C--CEE
Q psy10286 581 --DQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--N--NKI 652 (748)
Q Consensus 581 --~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~i 652 (748)
..++.+..+......-..+.+ ++.+++.||.++ .+..+|..+..|..+..+.........+.+ + +..
T Consensus 139 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-----~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 213 (330)
T 2hes_X 139 SGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD-----TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFR 213 (330)
T ss_dssp TCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCE
T ss_pred CCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-----eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeE
Confidence 334443333222222222222 567777787754 477788777777665443322222222223 2 446
Q ss_pred EEEeccCCCccccEEEEEeCCC------CcEEEccCCCC--CCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 653 YVCGGYDGAIFLQSVEMYDPIT------DEWKMIASMNV--MRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 653 ~v~GG~~~~~~~~~v~~yd~~~------~~W~~~~~~p~--~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
++.||.++ .+.+||..+ ..|.....++. ...-.+++...+.+++.||.++ .+.+||..++.|
T Consensus 214 l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg-----~v~iw~~~~~~~ 283 (330)
T 2hes_X 214 LCSGSDDS-----TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADG-----VLAVYEEVDGEW 283 (330)
T ss_dssp EEEEETTS-----CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTS-----CEEEEEEETTEE
T ss_pred EEEEeCCC-----eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCC-----EEEEEEcCCCce
Confidence 66777553 455555432 34665544432 1222233333455667777543 588899888888
Q ss_pred EecC
Q psy10286 725 AFVA 728 (748)
Q Consensus 725 ~~~~ 728 (748)
+.+.
T Consensus 284 ~~~~ 287 (330)
T 2hes_X 284 KVFA 287 (330)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6553
No 149
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.57 E-value=0.12 Score=54.34 Aligned_cols=216 Identities=10% Similarity=0.029 Sum_probs=105.2
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCc--------
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKR-------- 546 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r-------- 546 (748)
-..+..||........+.... ..-.+++.. ++..++.|+.+ ..+..||..+.+....-..+...
T Consensus 129 dg~i~i~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 201 (425)
T 1r5m_A 129 NGELRLWNKTGALLNVLNFHR--APIVSVKWNKDGTHIISMDVE-----NVTILWNVISGTVMQHFELKETGGSSINAEN 201 (425)
T ss_dssp TSCEEEEETTSCEEEEECCCC--SCEEEEEECTTSSEEEEEETT-----CCEEEEETTTTEEEEEECCC-----------
T ss_pred CCeEEEEeCCCCeeeeccCCC--ccEEEEEECCCCCEEEEEecC-----CeEEEEECCCCcEEEEeeccccCccceeecc
Confidence 346778884433333332211 111223332 55666666643 35788898887654432222111
Q ss_pred ------ceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCe
Q psy10286 547 ------SAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDS 619 (748)
Q Consensus 547 ------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 619 (748)
...+++...+..++.|+.+ ..+..||..+.+-...-.. ....-.+++.. ++..++.|+.++ .
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~-----~ 270 (425)
T 1r5m_A 202 HSGDGSLGVDVEWVDDDKFVIPGPK-----GAIFVYQITEKTPTGKLIG-HHGPISVLEFNDTNKLLLSASDDG-----T 270 (425)
T ss_dssp ----CCCBSCCEEEETTEEEEECGG-----GCEEEEETTCSSCSEEECC-CSSCEEEEEEETTTTEEEEEETTS-----C
T ss_pred ccCCcceeeEEEEcCCCEEEEEcCC-----CeEEEEEcCCCceeeeecc-CCCceEEEEECCCCCEEEEEcCCC-----E
Confidence 0222333333345666644 4688899877542111110 11111222332 566677777543 5
Q ss_pred EEEEECCCCcEEEccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--C
Q psy10286 620 VERYDPKTDEWTSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--M 696 (748)
Q Consensus 620 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 696 (748)
+..||..+.+....-.. ....-.+++.. ++ .++.|+.+ ..+.+||..+.+-... +.........+.+ +
T Consensus 271 i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 271 LRIWHGGNGNSQNCFYG-HSQSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLLAL--SIVDGVPIFAGRISQD 341 (425)
T ss_dssp EEEECSSSBSCSEEECC-CSSCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEEEE--EECTTCCEEEEEECTT
T ss_pred EEEEECCCCccceEecC-CCccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEeEe--cccCCccEEEEEEcCC
Confidence 88888776542211110 11112233333 45 66667654 4789999877653332 1111122222222 5
Q ss_pred CEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 697 GKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 697 ~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
+++++.|+.++ .+.+||..+..
T Consensus 342 ~~~l~~~~~dg-----~i~i~~~~~~~ 363 (425)
T 1r5m_A 342 GQKYAVAFMDG-----QVNVYDLKKLN 363 (425)
T ss_dssp SSEEEEEETTS-----CEEEEECHHHH
T ss_pred CCEEEEEECCC-----eEEEEECCCCc
Confidence 77777777543 58888886654
No 150
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.56 E-value=0.8 Score=46.54 Aligned_cols=226 Identities=12% Similarity=0.079 Sum_probs=124.5
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCC--eEEEccC-C-----CCCc-
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRR--VWNKVSP-M-----CFKR- 546 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~-~-----~~~r- 546 (748)
..+..+|+.+++.........-..-+++++. ++.+|+.... ...+.+||+... .-..+.. . ....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 4689999988776433221111122344443 6789987653 357999998765 1122211 0 1111
Q ss_pred ceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCC-------CCCCc-ceEEEEE-C-CEEEEEccCCCC
Q psy10286 547 SAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSM-------QKHRS-AGGVIAF-D-SYVYALGGHDGL 614 (748)
Q Consensus 547 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-------~~~r~-~~~~~~~-~-~~iyv~GG~~~~ 614 (748)
.-.++++. ++.+|+..+.. ...+.+||+....-..+... +.... -+++++. + +.||+....
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--- 216 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--- 216 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT---
T ss_pred CCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC---
Confidence 22344444 68999997521 25789999765544433211 11111 2344443 4 899998765
Q ss_pred cccCeEEEEECCCCcEEEccCCC-CCCcceeEEEECCEEEEEeccCC--CccccEEEEEeCCCCcEEEc-cCCCCCCc-c
Q psy10286 615 SIFDSVERYDPKTDEWTSVKPML-TKRCRLGVAALNNKIYVCGGYDG--AIFLQSVEMYDPITDEWKMI-ASMNVMRS-R 689 (748)
Q Consensus 615 ~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~i~v~GG~~~--~~~~~~v~~yd~~~~~W~~~-~~~p~~r~-~ 689 (748)
.+.+.+||+.+.+....-..+ ......+++...+.+|+..|... ......+..+|..+.+.... +..+.... -
T Consensus 217 --~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p 294 (329)
T 3fvz_A 217 --NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMP 294 (329)
T ss_dssp --TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSE
T ss_pred --CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCe
Confidence 357999999877665432211 22222344444577888777422 22345799999888776553 32222222 2
Q ss_pred eEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 690 VALVAN-MGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 690 ~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
.+++.. +|.|||....+ +.|.+|++..
T Consensus 295 ~~ia~~~dG~lyvad~~~-----~~I~~~~~~~ 322 (329)
T 3fvz_A 295 HDIVASEDGTVYIGDAHT-----NTVWKFTLTE 322 (329)
T ss_dssp EEEEECTTSEEEEEESSS-----CCEEEEEEEE
T ss_pred eEEEECCCCCEEEEECCC-----CEEEEEeCCc
Confidence 333333 67899987533 4688888753
No 151
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.54 E-value=0.38 Score=50.57 Aligned_cols=218 Identities=10% Similarity=0.066 Sum_probs=111.0
Q ss_pred CccceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEE-EccCCCCCcceeEE
Q psy10286 474 DSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWN-KVSPMCFKRSAVGA 551 (748)
Q Consensus 474 ~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~-~~~~~~~~r~~~~~ 551 (748)
..-..+..||..+++-...-. .....-.+++.. ++.+++.|+.+ ..+..||..+.+-. .+.. ....-.++
T Consensus 116 ~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~--h~~~v~~~ 187 (420)
T 3vl1_A 116 TTEGDIKVLDSNFNLQREIDQ-AHVSEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGSNPRTLIG--HRATVTDI 187 (420)
T ss_dssp ETTSCEEEECTTSCEEEEETT-SSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCCCEEEEC--CSSCEEEE
T ss_pred ECCCCEEEEeCCCcceeeecc-cccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCcCceEEcC--CCCcEEEE
Confidence 334568889988765433311 111112233333 56677777754 46888998765421 1111 11111223
Q ss_pred EEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCC-CCCcc-eEEEE----------------------ECCEEE
Q psy10286 552 AAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQ-KHRSA-GGVIA----------------------FDSYVY 606 (748)
Q Consensus 552 ~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~-~~~~~----------------------~~~~iy 606 (748)
+.. ++..++.|+.+ ..+..||..+.+-...-... .+... .+++. -++..+
T Consensus 188 ~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (420)
T 3vl1_A 188 AIIDRGRNVLSASLD-----GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYV 262 (420)
T ss_dssp EEETTTTEEEEEETT-----SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEE
T ss_pred EEcCCCCEEEEEcCC-----CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEE
Confidence 333 66666777755 35788898877533221111 11111 11111 256777
Q ss_pred EEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCE-EEEEeccCCCccccEEEEEeCCCCcE--EEcc
Q psy10286 607 ALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNK-IYVCGGYDGAIFLQSVEMYDPITDEW--KMIA 681 (748)
Q Consensus 607 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W--~~~~ 681 (748)
+.|+.++ .+..||..+.+-...-..... .....+.+ ++. +++.|+.+ ..+.+||..+..- ..+.
T Consensus 263 ~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~g~~d-----g~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 263 IAGHVSG-----VITVHNVFSKEQTIQLPSKFT-CSCNSLTVDGNNANYIYAGYEN-----GMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp EEEETTS-----CEEEEETTTCCEEEEECCTTS-SCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCTTSCSEEEE
T ss_pred EEEcCCC-----eEEEEECCCCceeEEcccccC-CCceeEEEeCCCCCEEEEEeCC-----CeEEEEEcCCCcCchhhhh
Confidence 7777643 588999887653322111111 11222333 344 77777754 4788999877531 2221
Q ss_pred CCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 682 SMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 682 ~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
.. ....-.++...++++++.||.++ .+.+||..+
T Consensus 332 ~~-~~~~v~~~~~~~~~~l~s~~~d~-----~v~iw~~~~ 365 (420)
T 3vl1_A 332 IN-EGTPINNVYFAAGALFVSSGFDT-----SIKLDIISD 365 (420)
T ss_dssp ES-TTSCEEEEEEETTEEEEEETTTE-----EEEEEEECC
T ss_pred cc-CCCCceEEEeCCCCEEEEecCCc-----cEEEEeccC
Confidence 11 11122233445788888888543 577777654
No 152
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.53 E-value=0.18 Score=58.61 Aligned_cols=218 Identities=13% Similarity=0.041 Sum_probs=111.2
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL- 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~- 554 (748)
..+..||..+++....-... ...-.+++.. ++..+++||.+ ..+.+||..+++....-.-.. ..-.+++..
T Consensus 35 g~v~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~-~~v~~~~~s~ 107 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQVT-ETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEAHP-DYIRSIAVHP 107 (814)
T ss_dssp SEEEEEETTTTEEEEEEECC-SSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEEEECCS-SCEEEEEECS
T ss_pred CEEEEEECCCCceEEEEecC-CCcEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEecCC-CCEEEEEEeC
Confidence 46888888877543321111 1111222222 56667777743 468899988876543221111 111222222
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCC-eEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKD-QWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
++...+.|+.+ ..+..||..++ .....-. .....-.+++.. ++..++.|+.++ .+..||..+..-.
T Consensus 108 ~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 108 TKPYVLSGSDD-----LTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPN 176 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSSCS
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCceEEEEEc-CCCCcEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcce
Confidence 56666667644 46788888765 3222211 111111223333 466777777643 6888988654322
Q ss_pred EccCCCCCCcceeEEEE---CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCC
Q psy10286 632 SVKPMLTKRCRLGVAAL---NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYD 706 (748)
Q Consensus 632 ~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 706 (748)
..-..........++.. ++..++.|+.+ ..+.+||..+.+-... +.........+.. ++.+++.||.+
T Consensus 177 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d 249 (814)
T 3mkq_A 177 FTLTTGQERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVAT--LEGHMSNVSFAVFHPTLPIIISGSED 249 (814)
T ss_dssp EEEECCCTTCCCEEEECCSTTCCEEEEECTT-----SEEEEEETTTTEEEEE--EECCSSCEEEEEECSSSSEEEEEETT
T ss_pred eEEecCCCCCEEEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 11111111111222222 66777788754 3788999877653221 1111122222222 56677777754
Q ss_pred CCCCCCeEEEEeCCCCce
Q psy10286 707 GVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 707 ~~~~~~~v~~yd~~~~~W 724 (748)
+ .+.+||..+.+-
T Consensus 250 g-----~v~vwd~~~~~~ 262 (814)
T 3mkq_A 250 G-----TLKIWNSSTYKV 262 (814)
T ss_dssp S-----CEEEEETTTCSE
T ss_pred C-----eEEEEECCCCcE
Confidence 3 588888877543
No 153
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.53 E-value=0.18 Score=53.46 Aligned_cols=257 Identities=13% Similarity=0.131 Sum_probs=121.4
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeec-cc--ccccceEEecccccccCCCccceEEEEeCCCCceEEccCCCc
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMA-EE--ETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSM 497 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~-~~--~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~ 497 (748)
++.+++.||.++ ++..||..++..... .. ..+....+..++.....|..-..+..||..+.+-.. .+..
T Consensus 119 ~~~~l~s~s~Dg------~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~--~~~~ 190 (410)
T 1vyh_C 119 VFSVMVSASEDA------TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR--TMHG 190 (410)
T ss_dssp SSSEEEEEESSS------CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE--CCCC
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE--EEcC
Confidence 345667776532 577888776654321 11 111112223333333333333456777776654322 2221
Q ss_pred ccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceE
Q psy10286 498 LRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTV 573 (748)
Q Consensus 498 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 573 (748)
.......+.+ ++..++.||.+ ..+..||..++.-...-. ........+.. ++.+++.||.+ ..+
T Consensus 191 h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~~~--~h~~~v~~~~~~~~g~~l~s~s~D-----~~v 258 (410)
T 1vyh_C 191 HDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCSND-----QTV 258 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEEEE--CCSSCEEEEEECTTSSEEEEEETT-----SCE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEe--CCCccEEEEEECCCCCEEEEEcCC-----CeE
Confidence 1112222222 56667777754 468889988775332111 11111122222 67777888755 357
Q ss_pred EEEeCCCCeEEEccCCCCCCcceEEEE----------------------ECCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 574 ECYEPDKDQWRIVKSMQKHRSAGGVIA----------------------FDSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 574 ~~yd~~~~~W~~~~~~~~~r~~~~~~~----------------------~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
..||..+......- ......-.++. ..+.+++.|+.+ ..+..||..+..-.
T Consensus 259 ~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D-----~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 259 RVWVVATKECKAEL--REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD-----KTIKMWDVSTGMCL 331 (410)
T ss_dssp EEEETTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT-----SEEEEEETTTTEEE
T ss_pred EEEECCCCceeeEe--cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC-----CeEEEEECCCCceE
Confidence 77887776543211 00000001111 125566777664 36888998776422
Q ss_pred EccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCc-EEEccCCCCCCcceEEEEE--CCEEEEEeCCC
Q psy10286 632 SVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDE-WKMIASMNVMRSRVALVAN--MGKLWAIGGYD 706 (748)
Q Consensus 632 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 706 (748)
. .+.........+.+ +++.++.||.+ ..|.+||..+.+ ...+.. ......++.+ ++.+++.||.+
T Consensus 332 ~--~~~~h~~~v~~v~~~~~g~~l~s~s~D-----~~i~vwd~~~~~~~~~~~~---h~~~v~~l~~~~~~~~l~sgs~D 401 (410)
T 1vyh_C 332 M--TLVGHDNWVRGVLFHSGGKFILSCADD-----KTLRVWDYKNKRCMKTLNA---HEHFVTSLDFHKTAPYVVTGSVD 401 (410)
T ss_dssp E--EEECCSSCEEEEEECSSSSCEEEEETT-----TEEEEECCTTSCCCEEEEC---CSSCEEEEEECSSSSCEEEEETT
T ss_pred E--EEECCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCceEEEEcC---CCCcEEEEEEcCCCCEEEEEeCC
Confidence 1 11111111222223 56667777754 468888886643 222211 1111222222 45667777754
Q ss_pred CCCCCCeEEEEeC
Q psy10286 707 GVSNLPTVEVYDP 719 (748)
Q Consensus 707 ~~~~~~~v~~yd~ 719 (748)
+ .|.+||.
T Consensus 402 ~-----~i~vW~~ 409 (410)
T 1vyh_C 402 Q-----TVKVWEC 409 (410)
T ss_dssp S-----EEEEEC-
T ss_pred C-----cEEEEeC
Confidence 3 4666653
No 154
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.52 E-value=0.6 Score=53.00 Aligned_cols=118 Identities=19% Similarity=0.244 Sum_probs=74.0
Q ss_pred EEEECCEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCCCC--------cceeEEEEECCEEEEEeCCCCCCCCceE
Q psy10286 504 VAVMKNRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMCFK--------RSAVGAAALNDKLYVCGGYDGVSSLNTV 573 (748)
Q Consensus 504 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 573 (748)
-++.++.||+... ...++.+|..|.+ |+.-...+.. ....+.+..+++||+... -..+
T Consensus 73 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l 140 (677)
T 1kb0_A 73 PVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRL 140 (677)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEE
Confidence 3567999999865 2468999998875 8875443211 112345567889988643 1479
Q ss_pred EEEeCCCCe--EEEccC-CCC--CCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCc--EEEc
Q psy10286 574 ECYEPDKDQ--WRIVKS-MQK--HRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDE--WTSV 633 (748)
Q Consensus 574 ~~yd~~~~~--W~~~~~-~~~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~ 633 (748)
..+|..+++ |+.-.. -+. .....+.++.++.+|+..+.........++.||..+.+ |+.-
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 999998775 877543 111 11223445568888876543222234679999998775 8764
No 155
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.52 E-value=0.1 Score=54.07 Aligned_cols=215 Identities=13% Similarity=0.082 Sum_probs=104.2
Q ss_pred ceEEEEeCCCCceEEccCCC---cccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMS---MLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAA 552 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~---~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 552 (748)
..+..||..+++-....... ....-.+++.. ++..++.|+.+ ..+..||..+++-...-..... .-.+++
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-----g~v~iwd~~~~~~~~~~~~h~~-~v~~v~ 188 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-----FSVKVWDLSQKAVLKSYNAHSS-EVNCVA 188 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEE
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEcCCCC-CEEEEE
Confidence 46778887766433222111 01111222222 66777788754 3588899988764332111111 112223
Q ss_pred EE-C-CEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE---CCEEEEEccCCCCcccCeEEEEECCC
Q psy10286 553 AL-N-DKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF---DSYVYALGGHDGLSIFDSVERYDPKT 627 (748)
Q Consensus 553 ~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~ 627 (748)
.. + +.+++.||.+ ..+..||..+.+-...............+.+ ++.+++.|+.++ .+..||..+
T Consensus 189 ~s~~~~~~~~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~ 258 (357)
T 4g56_B 189 ACPGKDTIFLSCGED-----GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKN 258 (357)
T ss_dssp ECTTCSSCEEEEETT-----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSC
T ss_pred EccCCCceeeeeccC-----CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc-----ceeEEECCC
Confidence 32 3 3567777755 3577888876653222122111222223332 456777887643 588889876
Q ss_pred CcEEEccCCCCCCcceeEEEE--C-CEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEE--ECCEEEEE
Q psy10286 628 DEWTSVKPMLTKRCRLGVAAL--N-NKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVA--NMGKLWAI 702 (748)
Q Consensus 628 ~~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~ 702 (748)
.+-.. .+.........+.+ + +++++.|+.+ ..|.+||..+.+-... +.....-.+++. .++++++.
T Consensus 259 ~~~~~--~~~~~~~~v~~l~~sp~~~~~lasgs~D-----~~i~iwd~~~~~~~~~--~~H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 259 PDSAQ--TSAVHSQNITGLAYSYHSSPFLASISED-----CTVAVLDADFSEVFRD--LSHRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp GGGCE--EECCCSSCEEEEEECSSSSCCEEEEETT-----SCEEEECTTSCEEEEE--CCCSSCEEEEEECSSSTTEEEE
T ss_pred CcEeE--EEeccceeEEEEEEcCCCCCEEEEEeCC-----CEEEEEECCCCcEeEE--CCCCCCEEEEEEeCCCCCEEEE
Confidence 54211 11111122222333 3 4567777754 3688899888764433 211111122332 36788888
Q ss_pred eCCCCCCCCCeEEEEeCCC
Q psy10286 703 GGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~ 721 (748)
||.++ .|.+||..+
T Consensus 330 ~s~Dg-----~v~iW~~~~ 343 (357)
T 4g56_B 330 VGWDH-----KVLHHHLPS 343 (357)
T ss_dssp EETTS-----CEEEEECC-
T ss_pred EcCCC-----eEEEEECCC
Confidence 88654 578888654
No 156
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.51 E-value=0.23 Score=51.79 Aligned_cols=184 Identities=11% Similarity=0.055 Sum_probs=90.8
Q ss_pred cceEEEEeCCCCc------eEEccCCCcc---cceeEEEEE-----CCEE-EEEccCCCCCCCCeEEEEECCC------C
Q psy10286 476 LSTVEVFDPLVGR------WQMAEAMSML---RSRVGVAVM-----KNRL-YAFGGYNGSERLSTVEEFDPVR------R 534 (748)
Q Consensus 476 ~~~~~~yd~~~~~------W~~~~~~~~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~v~~yd~~t------~ 534 (748)
-..+..||..+++ +..+...+.. ..-.+++.. ++.. ++.|+.+ ..+..||..+ .
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFHPFADESNS 164 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEESSSSHHHH
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCCcccccccc
Confidence 3567888877766 6666544311 122233333 4555 7777754 3466676655 2
Q ss_pred e---EEEccCC--------CCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCC-C-C---CCcceE
Q psy10286 535 V---WNKVSPM--------CFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSM-Q-K---HRSAGG 597 (748)
Q Consensus 535 ~---W~~~~~~--------~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~-~---~r~~~~ 597 (748)
+ |.....+ .....-.+++.. ++ +++.|+.+ ..+..||..+.+....-.. . . ...-.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~ 238 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNSIRS 238 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCCEEE
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCccce
Confidence 1 1110011 111112233333 56 77777754 4688999887764332211 0 0 111122
Q ss_pred EEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCC-----------CCcceeEEEE--CCEEEEEeccCCCcc
Q psy10286 598 VIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLT-----------KRCRLGVAAL--NNKIYVCGGYDGAIF 663 (748)
Q Consensus 598 ~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-----------~r~~~~~~~~--~~~i~v~GG~~~~~~ 663 (748)
++.. ++.+++.|+.++. ...+..||..+.+-...-..+. .......+.+ ++..++.|+.+
T Consensus 239 i~~~~~~~~l~~~~~d~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---- 312 (397)
T 1sq9_A 239 VKFSPQGSLLAIAHDSNS--FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD---- 312 (397)
T ss_dssp EEECSSTTEEEEEEEETT--EEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT----
T ss_pred EEECCCCCEEEEEecCCC--CceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC----
Confidence 2222 5667777765311 1468899988765322211100 1222223333 56677777754
Q ss_pred ccEEEEEeCCCCcE
Q psy10286 664 LQSVEMYDPITDEW 677 (748)
Q Consensus 664 ~~~v~~yd~~~~~W 677 (748)
..+.+||..+.+-
T Consensus 313 -g~i~iwd~~~~~~ 325 (397)
T 1sq9_A 313 -GKLRFWDVKTKER 325 (397)
T ss_dssp -SEEEEEETTTTEE
T ss_pred -CeEEEEEcCCCce
Confidence 4788999887653
No 157
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.50 E-value=0.22 Score=52.89 Aligned_cols=227 Identities=8% Similarity=-0.050 Sum_probs=119.6
Q ss_pred cceEeecCCCCceeecccc--cccceEEecccc-cccCC--CccceEEEEeCCCCceEEccCCCcccceeEEEEE-CCE-
Q psy10286 438 STVEVFDPLVGRWQMAEEE--TLSNAVISTKSC-LTKAG--DSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNR- 510 (748)
Q Consensus 438 ~~~~~y~~~~~~W~~~~~~--~~~~~~~~~~~~-~~~~g--~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~- 510 (748)
..++.+|.....-..+... ......+++++. +...+ .....++.+|..+++...+...+. ...+.+.. +++
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~ 236 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSK 236 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSS--CEEEEEECTTSSE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCC--cccCEEEcCCCCE
Confidence 5788888765544443321 122223333332 21111 112479999999988776654332 12222222 454
Q ss_pred EEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCC
Q psy10286 511 LYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSM 589 (748)
Q Consensus 511 iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 589 (748)
|++.+..++ ...++.+|..+.+...+..-.. .....+.. +|+.+++++..+ ....++.+|..++.-..+...
T Consensus 237 la~~~~~~g---~~~i~~~d~~~~~~~~l~~~~~--~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~~~ 309 (415)
T 2hqs_A 237 LAFALSKTG---SLNLYVMDLASGQIRQVTDGRS--NNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGAPQRITWE 309 (415)
T ss_dssp EEEEECTTS---SCEEEEEETTTCCEEECCCCSS--CEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCCEECCCS
T ss_pred EEEEEecCC---CceEEEEECCCCCEEeCcCCCC--cccceEECCCCCEEEEEECCC--CCcEEEEEECCCCCEEEEecC
Confidence 554554322 3579999999988766544221 11222222 565444444221 124789999988765444321
Q ss_pred CCCCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEE-ECCEEEEEeccCCCccccEE
Q psy10286 590 QKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAA-LNNKIYVCGGYDGAIFLQSV 667 (748)
Q Consensus 590 ~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v 667 (748)
.......+. -+|+..++++.++. ...++.+|+.+.+...+.... ...+.+. -+++.+++++.++. ...+
T Consensus 310 --~~~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~--~~~l 380 (415)
T 2hqs_A 310 --GSQNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGM--GSVL 380 (415)
T ss_dssp --SSEEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETT--EEEE
T ss_pred --CCcccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCC--ccEE
Confidence 111112222 25554444443221 347999999999887665332 2222222 25666666654332 2479
Q ss_pred EEEeCCCCcEEEccC
Q psy10286 668 EMYDPITDEWKMIAS 682 (748)
Q Consensus 668 ~~yd~~~~~W~~~~~ 682 (748)
+.+|........+..
T Consensus 381 ~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 381 NLVSTDGRFKARLPA 395 (415)
T ss_dssp EEEETTSCCEEECCC
T ss_pred EEEECCCCcEEEeeC
Confidence 999998877776643
No 158
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.45 E-value=0.16 Score=53.00 Aligned_cols=234 Identities=10% Similarity=-0.038 Sum_probs=118.6
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECC
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALND 556 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~ 556 (748)
..++.+|..+++...+..............-+++..++++.. ..++.+|+.+.+-..+...+... ..++
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~~~~~~~~~~~~~~------~~~g 128 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE-----LNLMKVDLETLEEQVIYTVDEEW------KGYG 128 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECCTTE------EEEE
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC-----CcEEEEECCCCCcEEEEeccccc------CCCC
Confidence 468899999888777754332111101112244433333322 26899998887655554433321 1111
Q ss_pred EEEEEeC-------------CC--C----------CCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCE-EEEE
Q psy10286 557 KLYVCGG-------------YD--G----------VSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSY-VYAL 608 (748)
Q Consensus 557 ~iyv~GG-------------~~--~----------~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~-iyv~ 608 (748)
+.+++.. .. + ......++.+|+.+++...+..- .......... ++. |++.
T Consensus 129 ~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~ 206 (396)
T 3c5m_A 129 TWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFC 206 (396)
T ss_dssp EEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEE
T ss_pred CEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC--CcccccceECCCCCCEEEEE
Confidence 2122210 00 0 02335789999998887666432 1111222222 344 5444
Q ss_pred ccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCC
Q psy10286 609 GGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVM 686 (748)
Q Consensus 609 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 686 (748)
...........++.+|..+..+..+.. ..+........+ +++.+++.+.........++.+|+.+.+...+...+.
T Consensus 207 ~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~- 284 (396)
T 3c5m_A 207 HEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP- 284 (396)
T ss_dssp ECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-
T ss_pred ecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-
Confidence 321111122579999998888777654 211112222233 4553333332222222459999999888777654442
Q ss_pred CcceEEEEE-CCEEEEEeCCCC-----------CCCCCeEEEEeCCCCceEec
Q psy10286 687 RSRVALVAN-MGKLWAIGGYDG-----------VSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 687 r~~~~~~~~-~~~l~v~GG~~~-----------~~~~~~v~~yd~~~~~W~~~ 727 (748)
.. ....- +++++++++.+. ......++++|+.++..+.+
T Consensus 285 -~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 285 -CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp -EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEE
T ss_pred -CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEc
Confidence 11 22223 677776654220 11235799999988876554
No 159
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.53 Score=50.34 Aligned_cols=199 Identities=11% Similarity=0.020 Sum_probs=100.3
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEE--ccCCC-CCcceeEEEE-EC---CEEEEEeCCCCCCCCceEEEEeCCC
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNK--VSPMC-FKRSAVGAAA-LN---DKLYVCGGYDGVSSLNTVECYEPDK 580 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~--~~~~~-~~r~~~~~~~-~~---~~iyv~GG~~~~~~~~~~~~yd~~~ 580 (748)
++..++.|+.+ ..++.++..+..... ...+. ....-.+++. -+ ++.++.|+.+ ..+..||..+
T Consensus 160 ~~~~l~~~~~~-----g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~ 229 (450)
T 2vdu_B 160 DDTTVIIADKF-----GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQ 229 (450)
T ss_dssp TSSEEEEEETT-----SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESC
T ss_pred CCCEEEEEeCC-----CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCC
Confidence 55666666542 457888876654221 00111 1111122222 26 7788888765 4678888776
Q ss_pred CeEEEc-cCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCC-----------------------
Q psy10286 581 DQWRIV-KSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPM----------------------- 636 (748)
Q Consensus 581 ~~W~~~-~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~----------------------- 636 (748)
...... ..-........+.. ++..++.||.+ ..+..||..+.+....-..
T Consensus 230 ~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (450)
T 2vdu_B 230 CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD-----DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN 303 (450)
T ss_dssp TTCEEEECCCCSSCEEEEEEC-STTEEEEEESS-----SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------
T ss_pred CceeeeeecCCCCceEEEEEC-CCCEEEEEeCC-----CeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccc
Confidence 543221 10011111122222 67777777754 3688999888764332110
Q ss_pred -CCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeC--C-CCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCC---
Q psy10286 637 -LTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDP--I-TDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGV--- 708 (748)
Q Consensus 637 -p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~--~-~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~--- 708 (748)
.......+++.. +++.+++|+.. ...+.+||. . ...+..+..+.....-.+++...+.+++..+....
T Consensus 304 ~~~~~~v~~i~~~~~~~~l~~~~~~----d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~ 379 (450)
T 2vdu_B 304 DIIEFAVSKIIKSKNLPFVAFFVEA----TKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGV 379 (450)
T ss_dssp -CBCCCEEEEEECSSSSEEEEEETT----CSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSS
T ss_pred ccceEEEEEEEEeCCCCEEEEEECC----CCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCC
Confidence 001111122222 34444444321 256888887 3 34566655444443334555566778777654321
Q ss_pred -CCCCeEEEEeCCCCceEe
Q psy10286 709 -SNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 709 -~~~~~v~~yd~~~~~W~~ 726 (748)
...-.++.++.+++.|+.
T Consensus 380 ~~~~i~v~~~~~~~~~~~~ 398 (450)
T 2vdu_B 380 QKNFAKFIEYNLNENSFVV 398 (450)
T ss_dssp CCCSEEEEEEETTTTEEEE
T ss_pred CCcceEEEEEEcCCCeEEE
Confidence 122267777888888853
No 160
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.44 E-value=0.95 Score=46.07 Aligned_cols=264 Identities=11% Similarity=0.080 Sum_probs=135.5
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeecccc----c-ccceEEecccccccCCCccceEEEEeCCCCceEEccCC
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEE----T-LSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAM 495 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~----~-~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~ 495 (748)
.+.+|++|.. ..++.....-.+|...... . ...++....+..+..|.. ..+++-+-.-.+|+.+...
T Consensus 46 ~~~~~~~G~~-------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~-g~i~~S~DgG~tW~~~~~~ 117 (327)
T 2xbg_A 46 RHHGWLVGVN-------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP-PIMLHTTDGGQSWSQIPLD 117 (327)
T ss_dssp SSCEEEEETT-------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET-TEEEEESSTTSSCEECCCC
T ss_pred CCcEEEEcCC-------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC-CeEEEECCCCCCceECccc
Confidence 4456776532 1244444455689876531 1 112232222333333322 2345444445689998643
Q ss_pred C-cccceeEEEE-ECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCce
Q psy10286 496 S-MLRSRVGVAV-MKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNT 572 (748)
Q Consensus 496 ~-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 572 (748)
. .+-..+.++. -++.+|+.|.. ..+++-+-.-.+|+.+.... +..-++++.. ++.+|++|.. ..
T Consensus 118 ~~~~~~~~~i~~~~~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~~------G~ 184 (327)
T 2xbg_A 118 PKLPGSPRLIKALGNGSAEMITNV------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSSR------GS 184 (327)
T ss_dssp TTCSSCEEEEEEEETTEEEEEETT------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEETT------SS
T ss_pred cCCCCCeEEEEEECCCCEEEEeCC------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEECC------Cc
Confidence 2 2222334443 36788887742 13555544556899886432 2233444444 5677776632 13
Q ss_pred EEEEe-CCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECC-CCcEEEccC--CCCCCcceeEEE
Q psy10286 573 VECYE-PDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPK-TDEWTSVKP--MLTKRCRLGVAA 647 (748)
Q Consensus 573 ~~~yd-~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~--~p~~r~~~~~~~ 647 (748)
+++-+ ....+|+.+.. +.+...+.++.. ++.+|+.+.. ..+++.+.. ..+|+.+.. ++.....++++.
T Consensus 185 ~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~~------G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~ 257 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVNG------GKIAFSDPDNSENWGELLSPLRRNSVGFLDLAY 257 (327)
T ss_dssp EEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEETT------TEEEEEETTEEEEECCCBCTTSSCCSCEEEEEE
T ss_pred EEEEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEeCC------ceEEEecCCCCCeeEeccCCcccCCcceEEEEe
Confidence 44433 33678998853 333444444443 6788877642 135555333 568987753 233222333333
Q ss_pred E-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCC-CCCCcceEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 648 L-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASM-NVMRSRVALVA-NMGKLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 648 ~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
. ++.+|++|+. ..+++-.-.-.+|+.+... +.+...+.++. -+++++++|. ++ .++.++. .|
T Consensus 258 ~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~-~G-----~i~~~~~---~~ 322 (327)
T 2xbg_A 258 RTPNEVWLAGGA------GALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQ-KG-----ILLRYVT---DL 322 (327)
T ss_dssp SSSSCEEEEEST------TCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECS-TT-----EEEEECC---CC
T ss_pred cCCCEEEEEeCC------CeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcC-Cc-----eEEEEcC---cc
Confidence 3 5788888863 2344433345789988532 22222344444 3677666653 22 5777764 46
Q ss_pred Eec
Q psy10286 725 AFV 727 (748)
Q Consensus 725 ~~~ 727 (748)
+..
T Consensus 323 ~~~ 325 (327)
T 2xbg_A 323 TAA 325 (327)
T ss_dssp TTC
T ss_pred cCC
Confidence 544
No 161
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.43 E-value=0.043 Score=57.19 Aligned_cols=234 Identities=14% Similarity=0.098 Sum_probs=104.1
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeeccccc-----ccceEEecccccccCCCccceEEEEeCCCCc-eEEccC
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEET-----LSNAVISTKSCLTKAGDSLSTVEVFDPLVGR-WQMAEA 494 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~-W~~~~~ 494 (748)
++.+++.|+.+ ..+..||..++.|....... +....+..++.....+..-..+..||..++. |.....
T Consensus 22 ~g~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~ 95 (377)
T 3dwl_C 22 QRTEFVTTTAT------NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLV 95 (377)
T ss_dssp SSSEEECCCSS------SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEE
T ss_pred CCCEEEEecCC------CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeE
Confidence 44566666643 25778888887665544321 1112233333333333333568888888776 543332
Q ss_pred CCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCe-EEEccCCCC--CcceeEEEEE-CCEEEEEeCCCCCC
Q psy10286 495 MSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRV-WNKVSPMCF--KRSAVGAAAL-NDKLYVCGGYDGVS 568 (748)
Q Consensus 495 ~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~-W~~~~~~~~--~r~~~~~~~~-~~~iyv~GG~~~~~ 568 (748)
+.........+.. ++..++.|+.+ ..+..||..+.+ |.....+.. ...-.+++.. +++.++.|+.+
T Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--- 167 (377)
T 3dwl_C 96 LLRLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD--- 167 (377)
T ss_dssp CCCCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS---
T ss_pred ecccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC---
Confidence 2222222222222 56677777754 357778877654 322222222 1222233332 66777777755
Q ss_pred CCceEEEEeCCCCe----------------EEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcE-
Q psy10286 569 SLNTVECYEPDKDQ----------------WRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEW- 630 (748)
Q Consensus 569 ~~~~~~~yd~~~~~----------------W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W- 630 (748)
..+..||..+.. -+.+..+.....-.+++.. ++..++.|+.++ .+..||..+.+-
T Consensus 168 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~-----~i~iwd~~~~~~~ 240 (377)
T 3dwl_C 168 --RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDS-----SVTIAYPSAPEQP 240 (377)
T ss_dssp --SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTT-----EEC-CEECSTTSC
T ss_pred --CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCCc
Confidence 356777765332 2222222111111122222 566777777643 577777766542
Q ss_pred -EEccCCCCCCcceeE--EEECCEEEEEeccCCCccccEEEEEeCCCCcEEEcc
Q psy10286 631 -TSVKPMLTKRCRLGV--AALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIA 681 (748)
Q Consensus 631 -~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 681 (748)
..+..+......... ..-++++++.|+. +.+.+|+.....|....
T Consensus 241 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------~~~~~~~~~~~~~~~~~ 288 (377)
T 3dwl_C 241 PRALITVKLSQLPLRSLLWANESAIVAAGYN------YSPILLQGNESGWAHTR 288 (377)
T ss_dssp EEECCCEECSSSCEEEEEEEETTEEEEEESS------SSEEEECCCC---CCSB
T ss_pred ceeeEeecCCCCceEEEEEcCCCCEEEEEcC------CcEEEEEeCCCceEEEe
Confidence 223222222222222 2337887777753 33456776666665543
No 162
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.41 E-value=0.07 Score=54.23 Aligned_cols=232 Identities=15% Similarity=0.241 Sum_probs=114.7
Q ss_pred ceEEEEeCCCCceEEccCCCcccce-eEEEEE---CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCc-ceeEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSR-VGVAVM---KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKR-SAVGA 551 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r-~~~~~ 551 (748)
..+..||..++....+..+...... .+++.. ++.+++.||.+ ..+..||..+.+|.....+.... .-.++
T Consensus 35 ~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~h~~~V~~v 109 (316)
T 3bg1_A 35 RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-----RKVIIWREENGTWEKSHEHAGHDSSVNSV 109 (316)
T ss_dssp TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-----SCEEEECCSSSCCCEEEEECCCSSCCCEE
T ss_pred CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-----CEEEEEECCCCcceEEEEccCCCCceEEE
Confidence 4577778776654333222211111 222222 25677777754 45888898887665443222111 11223
Q ss_pred EEE-C--CEEEEEeCCCCCCCCceEEEEeCCCC-eEEEccCCCCCCcceEEEEE-------------------CCEEEEE
Q psy10286 552 AAL-N--DKLYVCGGYDGVSSLNTVECYEPDKD-QWRIVKSMQKHRSAGGVIAF-------------------DSYVYAL 608 (748)
Q Consensus 552 ~~~-~--~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~~-------------------~~~iyv~ 608 (748)
+.. + +.+++.|+.+ ..+..||..+. .|.....+.........+.+ .+..++.
T Consensus 110 ~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 184 (316)
T 3bg1_A 110 CWAPHDYGLILACGSSD-----GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFAS 184 (316)
T ss_dssp EECCTTTCSCEEEECSS-----SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEEC
T ss_pred EECCCCCCcEEEEEcCC-----CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEE
Confidence 332 3 5677778765 35667776654 46543322211111111111 1345666
Q ss_pred ccCCCCcccCeEEEEECC-CCcEEEccCCCCCCcceeEEEE--C----CEEEEEeccCCCccccEEEEEeCCC---CcEE
Q psy10286 609 GGHDGLSIFDSVERYDPK-TDEWTSVKPMLTKRCRLGVAAL--N----NKIYVCGGYDGAIFLQSVEMYDPIT---DEWK 678 (748)
Q Consensus 609 GG~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~----~~i~v~GG~~~~~~~~~v~~yd~~~---~~W~ 678 (748)
||.++ .+..+|.. ...|..+..+.........+.+ + +.+++.|+.+ ..+.+||..+ ..|.
T Consensus 185 gs~D~-----~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D-----~~v~iw~~~~~~~~~~~ 254 (316)
T 3bg1_A 185 GGCDN-----LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD-----GRVFIWTCDDASSNTWS 254 (316)
T ss_dssp CBTTS-----BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT-----CEEEEEECSSTTCCCCB
T ss_pred ecCCC-----eEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC-----CeEEEEEccCccccchh
Confidence 66643 35556655 3457666544332222233333 2 2667777765 3677887765 3332
Q ss_pred E--ccCCCCCCcceEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCC-CCceEecCCCCCCCc
Q psy10286 679 M--IASMNVMRSRVALVA-NMGKLWAIGGYDGVSNLPTVEVYDPS-TDSWAFVAPMCAHEG 735 (748)
Q Consensus 679 ~--~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~~~~r~ 735 (748)
. +... ...-.+++. -++++++.||.++ .|.+|+.. .+.|..+..+..+-.
T Consensus 255 ~~~~~~~--~~~v~~v~~sp~g~~las~~~D~-----~v~lw~~~~~g~~~~~~~~~~~~~ 308 (316)
T 3bg1_A 255 PKLLHKF--NDVVWHVSWSITANILAVSGGDN-----KVTLWKESVDGQWVCISDVNKGQG 308 (316)
T ss_dssp CCEEEEC--SSCEEEEEECTTTCCEEEEESSS-----CEEEEEECTTSCEEEEEECC----
T ss_pred hhhhhcC--CCcEEEEEEcCCCCEEEEEcCCC-----eEEEEEECCCCcEEEeeeccCCCC
Confidence 1 1111 111122222 2577888887553 47777764 578998887776443
No 163
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.41 E-value=0.42 Score=48.36 Aligned_cols=228 Identities=9% Similarity=0.035 Sum_probs=108.7
Q ss_pred ceEEEEeCC-CCceEEccCCCcccceeEEEEE-CC-EEEEEccCCCCCCCCeEEEEECC--CCeEEEccCCCCCcceeEE
Q psy10286 477 STVEVFDPL-VGRWQMAEAMSMLRSRVGVAVM-KN-RLYAFGGYNGSERLSTVEEFDPV--RRVWNKVSPMCFKRSAVGA 551 (748)
Q Consensus 477 ~~~~~yd~~-~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~--t~~W~~~~~~~~~r~~~~~ 551 (748)
..+..||.. ++++..+...+....-..++.. ++ .+|+.+..+ ..+..|+.. ++++..+..++....-..+
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE-----FRVLAYRIAPDDGALTFAAESALPGSLTHI 89 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEEEEECSSCCSEE
T ss_pred CeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC-----CeEEEEEecCCCCceeeccccccCCCCcEE
Confidence 456777663 4555444333222222223332 44 466654421 456666665 7777765443322222333
Q ss_pred EEE-CC-EEEEEeCCCCCCCCceEEEEeCCCC-eEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECC
Q psy10286 552 AAL-ND-KLYVCGGYDGVSSLNTVECYEPDKD-QWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPK 626 (748)
Q Consensus 552 ~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 626 (748)
+.. ++ .+|+.+..+ ..+..||...+ ........+....-+.++.. +..+|+.+.. ...+..||..
T Consensus 90 ~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~ 159 (343)
T 1ri6_A 90 STDHQGQFVFVGSYNA-----GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK-----QDRICLFTVS 159 (343)
T ss_dssp EECTTSSEEEEEETTT-----TEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG-----GTEEEEEEEC
T ss_pred EEcCCCCEEEEEecCC-----CeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCC-----CCEEEEEEec
Confidence 333 44 466655422 45778887422 23333222222222333333 3467776533 2468999988
Q ss_pred C-CcEEEcc----CCCCCCcceeEEEE-CC-EEEEEeccCCCccccEEEEEeCC--CCcEEE---ccCCCCC---Ccce-
Q psy10286 627 T-DEWTSVK----PMLTKRCRLGVAAL-NN-KIYVCGGYDGAIFLQSVEMYDPI--TDEWKM---IASMNVM---RSRV- 690 (748)
Q Consensus 627 ~-~~W~~~~----~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~---~~~~p~~---r~~~- 690 (748)
+ .+...+. ..+....-..++.. ++ .+|+.+.. .+.+.+||.. +.++.. +...+.. ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 234 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAA 234 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEE
T ss_pred CCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCcEEEEeeccccCccccccCCcc
Confidence 7 6665432 11111111122222 34 57777643 2478888874 344432 3333332 1122
Q ss_pred EEEEE--CCEEEEEeCCCCCCCCCeEEEEeCC--CCceEecCC
Q psy10286 691 ALVAN--MGKLWAIGGYDGVSNLPTVEVYDPS--TDSWAFVAP 729 (748)
Q Consensus 691 ~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~ 729 (748)
.++.. +..||+.++.+ ..+.+||.. +++++.+..
T Consensus 235 ~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 235 DIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp EEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEE
T ss_pred ceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeee
Confidence 23332 34676665422 468888877 556665533
No 164
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.40 E-value=0.64 Score=51.59 Aligned_cols=119 Identities=13% Similarity=0.171 Sum_probs=72.0
Q ss_pred EEEECCEEEEEccCCCCCCCCeEEEEEC-CCC--eEEEccCCCCC--------cceeEEEEECCEEEEEeCCCCCCCCce
Q psy10286 504 VAVMKNRLYAFGGYNGSERLSTVEEFDP-VRR--VWNKVSPMCFK--------RSAVGAAALNDKLYVCGGYDGVSSLNT 572 (748)
Q Consensus 504 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~-~t~--~W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 572 (748)
-++.++.||+.... ...++.+|. .+. .|+.-...+.. ....+.+..+++||+..+ -..
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~ 126 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGH 126 (571)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCE
Confidence 35679999997652 246999998 765 48875433211 112234567899988643 147
Q ss_pred EEEEeCCCCe--EEEccCCCCC--CcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCc--EEEc
Q psy10286 573 VECYEPDKDQ--WRIVKSMQKH--RSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDE--WTSV 633 (748)
Q Consensus 573 ~~~yd~~~~~--W~~~~~~~~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~ 633 (748)
++.+|..+.+ |+.-..-+.. ....+-++.++.+|+-.+..+......++.||+.+.+ |+.-
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 8999998774 8764321111 1122334568998876542111123579999998764 8654
No 165
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.40 E-value=0.32 Score=48.86 Aligned_cols=215 Identities=14% Similarity=0.118 Sum_probs=106.2
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL- 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~- 554 (748)
..+..+|..++.-...-..... .-.++... ++..++.|+.+ ..+..||..+++-...-. .....-.+++..
T Consensus 35 g~v~lWd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~ 107 (304)
T 2ynn_A 35 GRVELWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHP 107 (304)
T ss_dssp SEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEEEE-CCSSCEEEEEECS
T ss_pred CcEEEEECCCCceeEEeeccCC-cEEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEEEEe-CCCCcEEEEEEcC
Confidence 4678888877653221111111 11122222 56667777754 468889988765322111 011112223332
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCc-ceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCc--
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRS-AGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDE-- 629 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~-~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-- 629 (748)
++.+++.|+.+ ..+..||..++. .....+..... -.+++.. ++.+++.|+.++ .+..||..+..
T Consensus 108 ~~~~l~sgs~D-----~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~-----~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 108 TKPYVLSGSDD-----LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPN 176 (304)
T ss_dssp SSSEEEEEETT-----SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTS-----EEEEEETTCSSCS
T ss_pred CCCEEEEECCC-----CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCCCcc
Confidence 56677777755 357778876542 11111111111 1222222 456777887754 57888876542
Q ss_pred EEEccCCCCCCcceeEEEE----CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEe
Q psy10286 630 WTSVKPMLTKRCRLGVAAL----NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIG 703 (748)
Q Consensus 630 W~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~G 703 (748)
..... ...+ ....+.+ ++..++.|+.+ ..|.+||..+.+-. ..+.........+.. ++.+++.|
T Consensus 177 ~~~~~--~~~~-~v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~~--~~~~~h~~~v~~~~~~p~~~~l~s~ 246 (304)
T 2ynn_A 177 FTLTT--GQER-GVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCV--ATLEGHMSNVSFAVFHPTLPIIISG 246 (304)
T ss_dssp EEEEC--CCTT-CEEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEEE--EEEECCSSCEEEEEECSSSSEEEEE
T ss_pred ceecc--CCcC-cEEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCccc--eeeCCCCCCEEEEEECCCCCEEEEE
Confidence 11111 0111 1122222 45667777754 47888998876422 222212222222332 56677778
Q ss_pred CCCCCCCCCeEEEEeCCCCce
Q psy10286 704 GYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 704 G~~~~~~~~~v~~yd~~~~~W 724 (748)
|.++ .|.+||..+.+-
T Consensus 247 s~Dg-----~i~iWd~~~~~~ 262 (304)
T 2ynn_A 247 SEDG-----TLKIWNSSTYKV 262 (304)
T ss_dssp ETTS-----CEEEEETTTCCE
T ss_pred cCCC-----eEEEEECCCCce
Confidence 7553 588888877553
No 166
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.39 E-value=0.34 Score=48.97 Aligned_cols=178 Identities=13% Similarity=0.230 Sum_probs=85.8
Q ss_pred ceEEEEeCCC--CceEEccCCCcccceeE-EEEE---CCEEEEEccCCCCCCCCeEEEEECCCC-------eEEEccCCC
Q psy10286 477 STVEVFDPLV--GRWQMAEAMSMLRSRVG-VAVM---KNRLYAFGGYNGSERLSTVEEFDPVRR-------VWNKVSPMC 543 (748)
Q Consensus 477 ~~~~~yd~~~--~~W~~~~~~~~~r~~~~-~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~t~-------~W~~~~~~~ 543 (748)
..+..||..+ ..+.....+........ ++.. ++.+++.|+.+ ..+..||..+. .|..+..+.
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~ 107 (351)
T 3f3f_A 33 QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-----KTVKLWEEDPDQEECSGRRWNKLCTLN 107 (351)
T ss_dssp SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEECTTSCTTSSCSEEEEEEEC
T ss_pred CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-----CeEEEEecCCCcccccccCcceeeeec
Confidence 3566666654 34444433322222222 2332 26777888754 35677777653 344433322
Q ss_pred CCccee-EEEEE-C--CEEEEEeCCCCCCCCceEEEEeCCCCe----EEEcc---CC--C-CC-C-cceEEEEE----CC
Q psy10286 544 FKRSAV-GAAAL-N--DKLYVCGGYDGVSSLNTVECYEPDKDQ----WRIVK---SM--Q-KH-R-SAGGVIAF----DS 603 (748)
Q Consensus 544 ~~r~~~-~~~~~-~--~~iyv~GG~~~~~~~~~~~~yd~~~~~----W~~~~---~~--~-~~-r-~~~~~~~~----~~ 603 (748)
...... +++.. + +..++.|+.+ ..+..||..+.+ |.... .+ . .. . ...+++.. ++
T Consensus 108 ~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 182 (351)
T 3f3f_A 108 DSKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSP 182 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSC
T ss_pred ccCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCC
Confidence 222222 22222 3 6677777754 467888876543 32111 11 1 11 1 11122221 36
Q ss_pred EEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CC----EEEEEeccCCCccccEEEEEeCCC
Q psy10286 604 YVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NN----KIYVCGGYDGAIFLQSVEMYDPIT 674 (748)
Q Consensus 604 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~----~i~v~GG~~~~~~~~~v~~yd~~~ 674 (748)
..++.|+.++ .+..++........+..+.........+.+ ++ .+++.|+.++ .+.+||..+
T Consensus 183 ~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg-----~i~iwd~~~ 249 (351)
T 3f3f_A 183 EKLAVSALEQ-----AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG-----RIRIFKITE 249 (351)
T ss_dssp CEEEEEETTE-----EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS-----CEEEEEEEE
T ss_pred cEEEEecCCC-----cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC-----eEEEEeCCC
Confidence 6777777643 345556666666554444333333333333 33 7888887654 355565543
No 167
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.37 E-value=0.092 Score=54.11 Aligned_cols=179 Identities=18% Similarity=0.263 Sum_probs=98.1
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCC--CCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC--FKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWR 584 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~--~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 584 (748)
++.+++.||.+ ..+..||..+++|.....+. ....-.+++.. +++.++.|+.+ ..+..||..++.+.
T Consensus 27 ~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-----~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 27 AGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-----ATTCIWKKNQDDFE 96 (345)
T ss_dssp TSSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECCC-EE
T ss_pred CCCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-----CcEEEEEccCCCeE
Confidence 56677777754 35778888888776433221 11222222222 67777888865 35677787777765
Q ss_pred EccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCC-cEEEccCCCCCCcceeEEEE--CCEEEEEeccC
Q psy10286 585 IVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTD-EWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYD 659 (748)
Q Consensus 585 ~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 659 (748)
.+..+......-..+.+ ++..++.|+.++ .+..+|..+. .+..+..+.........+.+ ++.+++.|+.+
T Consensus 97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred EEEEccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 55444322222222332 567777787654 4777877654 33333222222222223333 56777788765
Q ss_pred CCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCC
Q psy10286 660 GAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYD 706 (748)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 706 (748)
+ .+.+||..+..|..+..+.........+.. +++.++.|+.+
T Consensus 172 ~-----~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 172 D-----TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp S-----CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred C-----cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 3 578888888888765444322222222333 56677777754
No 168
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.37 E-value=0.29 Score=48.93 Aligned_cols=215 Identities=13% Similarity=0.054 Sum_probs=114.4
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC----CcceeE
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF----KRSAVG 550 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~----~r~~~~ 550 (748)
...+++||+.++ ....... . ..-.+++.. ++.+|+.... ...+.+||+.+++...+..... .+....
T Consensus 49 ~~~i~~~~~~~~-~~~~~~~-~-~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i 120 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMHP-S-HHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIADSFEGKKLNSPNDV 120 (296)
T ss_dssp GTEEEEEETTSC-EEEEESS-C-SSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEECEETTEECCCCCCE
T ss_pred CCEEEEEECCCC-eEEEECC-C-CCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCE
Confidence 357899999987 5544321 1 112333333 6788876531 2469999998888766532111 111222
Q ss_pred EEEECCEEEEE----eCCC------C--CCCCceEEEEeCCCCeEEEcc-CCCCCCcceEEEEE-CCEEEEEccCCCCcc
Q psy10286 551 AAALNDKLYVC----GGYD------G--VSSLNTVECYEPDKDQWRIVK-SMQKHRSAGGVIAF-DSYVYALGGHDGLSI 616 (748)
Q Consensus 551 ~~~~~~~iyv~----GG~~------~--~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~ 616 (748)
+..-+|++|+. |... . ......+++||+. ++...+. .+..+ .+++.. ++++++.+..
T Consensus 121 ~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~gi~~s~dg~~lv~~~~----- 191 (296)
T 3e5z_A 121 CLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP---NGLAFLPSGNLLVSDTG----- 191 (296)
T ss_dssp EECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE---EEEEECTTSCEEEEETT-----
T ss_pred EECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC---ccEEECCCCCEEEEeCC-----
Confidence 22237889986 4311 0 1113579999987 5544432 22111 233332 5665544433
Q ss_pred cCeEEEEECC-CCcE-EE--ccCCCCCCcceeEEE-ECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceE
Q psy10286 617 FDSVERYDPK-TDEW-TS--VKPMLTKRCRLGVAA-LNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVA 691 (748)
Q Consensus 617 ~~~~~~yd~~-~~~W-~~--~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 691 (748)
...+++||+. +.+. .. +-..... .-.+++. -+|.||+..+ +.|.+||+.......+.. +.. -..
T Consensus 192 ~~~i~~~~~~~~g~~~~~~~~~~~~~~-~p~~i~~d~~G~l~v~~~-------~~v~~~~~~g~~~~~~~~-~~~--~~~ 260 (296)
T 3e5z_A 192 DNATHRYCLNARGETEYQGVHFTVEPG-KTDGLRVDAGGLIWASAG-------DGVHVLTPDGDELGRVLT-PQT--TSN 260 (296)
T ss_dssp TTEEEEEEECSSSCEEEEEEEECCSSS-CCCSEEEBTTSCEEEEET-------TEEEEECTTSCEEEEEEC-SSC--CCE
T ss_pred CCeEEEEEECCCCcCcCCCeEeeCCCC-CCCeEEECCCCCEEEEcC-------CeEEEECCCCCEEEEEEC-CCC--cee
Confidence 2478999886 4454 21 1111111 1123333 2678888772 579999998655544432 222 122
Q ss_pred EEEE--C-CEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 692 LVAN--M-GKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 692 ~~~~--~-~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
++.- + +.||+... ..++.|+++++.-+
T Consensus 261 ~~f~~~d~~~L~v~t~-------~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 261 LCFGGPEGRTLYMTVS-------TEFWSIETNVRGLE 290 (296)
T ss_dssp EEEESTTSCEEEEEET-------TEEEEEECSCCBCC
T ss_pred EEEECCCCCEEEEEcC-------CeEEEEEccccccc
Confidence 2221 2 36777653 36899999887644
No 169
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.36 E-value=0.26 Score=49.52 Aligned_cols=225 Identities=14% Similarity=0.131 Sum_probs=109.0
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeec-c--cccccceEEecccccccCCCccceEEEEeCCCCceEE-ccCCC
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMA-E--EETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQM-AEAMS 496 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~-~--~~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~-~~~~~ 496 (748)
++..++.|+.+ .++..||..++.-... . ...+....+..++.....|..-..+..||..+++-.. +..
T Consensus 24 ~~~~l~s~~~d------g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-- 95 (304)
T 2ynn_A 24 TEPWVLTTLYS------GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-- 95 (304)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC--
T ss_pred CCCEEEEEcCC------CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC--
Confidence 34456666643 2577788776643221 1 1112222333333333333344578888988775322 111
Q ss_pred cccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCC-CCcceeEEEEE--CCEEEEEeCCCCCCCCce
Q psy10286 497 MLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC-FKRSAVGAAAL--NDKLYVCGGYDGVSSLNT 572 (748)
Q Consensus 497 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 572 (748)
....-.+++.. ++.+++.|+.+ ..+..||..++. .....+. ....-.+++.. ++.+++.||.+ ..
T Consensus 96 h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D-----~~ 164 (304)
T 2ynn_A 96 HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-----RT 164 (304)
T ss_dssp CSSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETT-----SE
T ss_pred CCCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCC-----Ce
Confidence 11111222222 56677777754 357778876542 1111111 11111223332 45677788765 46
Q ss_pred EEEEeCCCCe--EEEccCCCCCCcceEEEEE---CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEE
Q psy10286 573 VECYEPDKDQ--WRIVKSMQKHRSAGGVIAF---DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAA 647 (748)
Q Consensus 573 ~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 647 (748)
+..||..+.. ..... ...+.-...... ++..++.|+.+ ..+..+|..+.+-.. .+.........+.
T Consensus 165 v~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~~~--~~~~h~~~v~~~~ 235 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTT--GQERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVA--TLEGHMSNVSFAV 235 (304)
T ss_dssp EEEEETTCSSCSEEEEC--CCTTCEEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEEEE--EEECCSSCEEEEE
T ss_pred EEEEECCCCCccceecc--CCcCcEEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCccce--eeCCCCCCEEEEE
Confidence 7788875543 11111 111111111221 45566677664 368889988765322 1221122222233
Q ss_pred E--CCEEEEEeccCCCccccEEEEEeCCCCcEE
Q psy10286 648 L--NNKIYVCGGYDGAIFLQSVEMYDPITDEWK 678 (748)
Q Consensus 648 ~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 678 (748)
+ ++.+++.||.++ .+.+||..+.+-.
T Consensus 236 ~~p~~~~l~s~s~Dg-----~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 236 FHPTLPIIISGSEDG-----TLKIWNSSTYKVE 263 (304)
T ss_dssp ECSSSSEEEEEETTS-----CEEEEETTTCCEE
T ss_pred ECCCCCEEEEEcCCC-----eEEEEECCCCcee
Confidence 3 566778887653 5888998776543
No 170
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.34 E-value=0.19 Score=52.47 Aligned_cols=218 Identities=14% Similarity=0.094 Sum_probs=103.6
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcce-eEEE
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSA-VGAA 552 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~-~~~~ 552 (748)
-..+..||..+++-...-..+.+......... ++.+++.|+.+ ..+..||..+.+-... +...... .+++
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~~~~--~~~~~~~v~~~~ 193 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSCSHI--LQGHRQEILAVS 193 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCCCEE--ECCCCSCEEEEE
T ss_pred CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcceeee--ecCCCCcEEEEE
Confidence 35688899888765444333322222221111 33467777644 3588888876542211 1111111 2222
Q ss_pred EE-CC-EEEEEeCCCCCCCCceEEEEeCCCCe--EEEccC------------CCCCCcceEEEEE--CCEEEEEccCCCC
Q psy10286 553 AL-ND-KLYVCGGYDGVSSLNTVECYEPDKDQ--WRIVKS------------MQKHRSAGGVIAF--DSYVYALGGHDGL 614 (748)
Q Consensus 553 ~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~------------~~~~r~~~~~~~~--~~~iyv~GG~~~~ 614 (748)
.. ++ .+++.|+.+ ..+..||..+.. ...+.. ..........+.+ ++..++.|+.++
T Consensus 194 ~~~~~~~ll~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg- 267 (408)
T 4a11_B 194 WSPRYDYILATASAD-----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN- 267 (408)
T ss_dssp ECSSCTTEEEEEETT-----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred ECCCCCcEEEEEcCC-----CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCC-
Confidence 22 33 377778755 357788876543 111100 0111111122222 566677777643
Q ss_pred cccCeEEEEECCCCcEEEccC-----CCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcc
Q psy10286 615 SIFDSVERYDPKTDEWTSVKP-----MLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSR 689 (748)
Q Consensus 615 ~~~~~~~~yd~~~~~W~~~~~-----~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 689 (748)
.+..||..+.+-..... ..............+..+++++.+ ..+.+||..+.+-... +......
T Consensus 268 ----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~v~d~~~~~~~~~--~~~~~~~ 336 (408)
T 4a11_B 268 ----RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG-----STIAVYTVYSGEQITM--LKGHYKT 336 (408)
T ss_dssp ----CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET-----TEEEEEETTTCCEEEE--ECCCSSC
T ss_pred ----eEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC-----CEEEEEECcCCcceee--eccCCCe
Confidence 58899988765322110 001111111111122334444432 4788999877653322 2111112
Q ss_pred -eEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 690 -VALVA-NMGKLWAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 690 -~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
.+++. -++++++.||.++ .+.+||+.+.
T Consensus 337 v~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~ 366 (408)
T 4a11_B 337 VDCCVFQSNFQELYSGSRDC-----NILAWVPSLY 366 (408)
T ss_dssp EEEEEEETTTTEEEEEETTS-----CEEEEEECC-
T ss_pred EEEEEEcCCCCEEEEECCCC-----eEEEEeCCCC
Confidence 22222 2677778887653 4778877664
No 171
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.33 E-value=0.37 Score=55.97 Aligned_cols=226 Identities=12% Similarity=0.095 Sum_probs=112.9
Q ss_pred cEEEEEcCccCCCCCCcceEeecCCCCceeec-c--cccccceEEecccccccCCCccceEEEEeCCCCceEEccCCCcc
Q psy10286 422 GHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMA-E--EETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSML 498 (748)
Q Consensus 422 ~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~-~--~~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~ 498 (748)
+..+++|+.+ ..+..||..++..... . ...+....+..++.....|..-..+..||..+++....-.- ..
T Consensus 25 ~~~la~~~~~------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~ 97 (814)
T 3mkq_A 25 EPWVLTTLYS------GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HP 97 (814)
T ss_dssp SSEEEEEETT------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CS
T ss_pred CCEEEEEeCC------CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-CC
Confidence 3455666532 3578888777654332 1 11222223334433333333345788999888776432111 11
Q ss_pred cceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCC-eEEEccCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEE
Q psy10286 499 RSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRR-VWNKVSPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVE 574 (748)
Q Consensus 499 r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~-~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 574 (748)
..-.+++.. ++...+.|+.+ ..+..||..++ .....-.- ....-.+++.. ++..++.|+.+ ..+.
T Consensus 98 ~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d-----g~v~ 166 (814)
T 3mkq_A 98 DYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWALEQTFEG-HEHFVMCVAFNPKDPSTFASGCLD-----RTVK 166 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGTSEEEEEEEC-CSSCEEEEEEETTEEEEEEEEETT-----SEEE
T ss_pred CCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCceEEEEEcC-CCCcEEEEEEEcCCCCEEEEEeCC-----CeEE
Confidence 111222222 55556667643 46888888776 33222111 11112233333 46677777754 4688
Q ss_pred EEeCCCCeEEEccCCCCCCcceEEEEE---CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--C
Q psy10286 575 CYEPDKDQWRIVKSMQKHRSAGGVIAF---DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--N 649 (748)
Q Consensus 575 ~yd~~~~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 649 (748)
.||..+..-...-..........++.. ++..++.|+.++ .+..||..+.+-... +.........+.+ +
T Consensus 167 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~ 239 (814)
T 3mkq_A 167 VWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL-----TIKIWDYQTKSCVAT--LEGHMSNVSFAVFHPT 239 (814)
T ss_dssp EEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTS-----EEEEEETTTTEEEEE--EECCSSCEEEEEECSS
T ss_pred EEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCcEEEE--EcCCCCCEEEEEEcCC
Confidence 888765542111111111222223332 667777777643 688999877653222 1111122222223 5
Q ss_pred CEEEEEeccCCCccccEEEEEeCCCCcE
Q psy10286 650 NKIYVCGGYDGAIFLQSVEMYDPITDEW 677 (748)
Q Consensus 650 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W 677 (748)
+.+++.||.+ ..+.+||..+.+-
T Consensus 240 ~~~l~~~~~d-----g~v~vwd~~~~~~ 262 (814)
T 3mkq_A 240 LPIIISGSED-----GTLKIWNSSTYKV 262 (814)
T ss_dssp SSEEEEEETT-----SCEEEEETTTCSE
T ss_pred CCEEEEEeCC-----CeEEEEECCCCcE
Confidence 6677777754 3578888877553
No 172
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.31 E-value=0.34 Score=48.46 Aligned_cols=197 Identities=12% Similarity=0.152 Sum_probs=95.3
Q ss_pred CEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--C--CEEEEEeCCCCCCCCceEEEEeCCCCe-E
Q psy10286 509 NRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL--N--DKLYVCGGYDGVSSLNTVECYEPDKDQ-W 583 (748)
Q Consensus 509 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~-W 583 (748)
+.+++.|+.+ ..+..||..+++|..+..+........++.+ + +.+++.|+.+ ..+..||..+.. +
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~~~~ 136 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKENGTT 136 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSSSCB
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCCCce
Confidence 5677778754 4688889888776544322211112222222 2 5667777754 356677766542 2
Q ss_pred EEccCCCCCCcceEEEEE--------------CCEEEEEccCCCCcccCeEEEEECCC--CcEEEccCCCCCCcceeEEE
Q psy10286 584 RIVKSMQKHRSAGGVIAF--------------DSYVYALGGHDGLSIFDSVERYDPKT--DEWTSVKPMLTKRCRLGVAA 647 (748)
Q Consensus 584 ~~~~~~~~~r~~~~~~~~--------------~~~iyv~GG~~~~~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~ 647 (748)
...........-.+++.. ++..++.||.++ .+..||..+ ..|.....+.........+.
T Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~-----~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~ 211 (297)
T 2pm7_B 137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211 (297)
T ss_dssp CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC-----cEEEEEEcCCCceEEEEEEecCCCCceEEEE
Confidence 100000000000111111 245777777754 355566544 34654443332222223333
Q ss_pred E--C---CEEEEEeccCCCccccEEEEEeCCC--CcEEEccC--CCCCCcceEEEE-ECCEEEEEeCCCCCCCCCeEEEE
Q psy10286 648 L--N---NKIYVCGGYDGAIFLQSVEMYDPIT--DEWKMIAS--MNVMRSRVALVA-NMGKLWAIGGYDGVSNLPTVEVY 717 (748)
Q Consensus 648 ~--~---~~i~v~GG~~~~~~~~~v~~yd~~~--~~W~~~~~--~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~v~~y 717 (748)
+ + +..++.|+.++ .+.+||..+ ..|..... ......-.++.. -++++++.||.++ .|.+|
T Consensus 212 ~sp~~~~~~~las~s~D~-----~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~-----~v~lw 281 (297)
T 2pm7_B 212 WSPTVLLRSYMASVSQDR-----TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTLW 281 (297)
T ss_dssp ECCCCSSSEEEEEEETTS-----CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTS-----CEEEE
T ss_pred ECCCCCCceEEEEEECCC-----cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCC-----cEEEE
Confidence 3 2 37788887653 566677654 34543211 111111122222 2677888887543 47777
Q ss_pred eCC-CCceEecCCC
Q psy10286 718 DPS-TDSWAFVAPM 730 (748)
Q Consensus 718 d~~-~~~W~~~~~~ 730 (748)
+.. .+.|..+..+
T Consensus 282 ~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 282 KENLEGKWEPAGEV 295 (297)
T ss_dssp EECTTSCEEEC---
T ss_pred EECCCCcEEecccc
Confidence 755 4689887655
No 173
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.30 E-value=0.26 Score=51.92 Aligned_cols=216 Identities=9% Similarity=0.097 Sum_probs=108.8
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 554 (748)
..+..||..+.+- ...+... ....+... ++..++.|+.+ ..+..||..+.+-...-. .....-.+++..
T Consensus 78 ~~v~i~d~~~~~~--~~~~~~~-~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~ 148 (420)
T 3vl1_A 78 GHDFLFNTIIRDG--SKMLKRA-DYTAVDTAKLQMRRFILGTTE-----GDIKVLDSNFNLQREIDQ-AHVSEITKLKFF 148 (420)
T ss_dssp TEEEEEECCSEET--TTTSCSC-CEEEEEEECSSSCEEEEEETT-----SCEEEECTTSCEEEEETT-SSSSCEEEEEEC
T ss_pred CcEEEEEecccce--eeEEecC-CceEEEEEecCCCEEEEEECC-----CCEEEEeCCCcceeeecc-cccCccEEEEEC
Confidence 4677888765432 2222222 11222222 67788888754 368889988775443321 111222233333
Q ss_pred -CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCc-ceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 555 -NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRS-AGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 555 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
++..++.|+.+ ..+..||..+.+-.. .+..... -.+++.. ++..++.|+.++ .+..||..+.+-.
T Consensus 149 ~~~~~l~s~s~d-----~~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 149 PSGEALISSSQD-----MQLKIWSVKDGSNPR--TLIGHRATVTDIAIIDRGRNVLSASLDG-----TIRLWECGTGTTI 216 (420)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTCCCCE--EEECCSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEeCCCCcCce--EEcCCCCcEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCCcee
Confidence 66677777754 468889987654111 1111111 1222232 566666777643 5888898876533
Q ss_pred EccCCC-CCCcc-eeEEE----------------------ECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCC
Q psy10286 632 SVKPML-TKRCR-LGVAA----------------------LNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMR 687 (748)
Q Consensus 632 ~~~~~p-~~r~~-~~~~~----------------------~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 687 (748)
..-... ..... .+++. -+++.++.|+.++ .+.+||..+.+-...-......
T Consensus 217 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~ 291 (420)
T 3vl1_A 217 HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG-----VITVHNVFSKEQTIQLPSKFTC 291 (420)
T ss_dssp EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS-----CEEEEETTTCCEEEEECCTTSS
T ss_pred EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC-----eEEEEECCCCceeEEcccccCC
Confidence 321111 11111 11111 2567778887543 5889998776532221111111
Q ss_pred cceEEEEE-CCE-EEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 688 SRVALVAN-MGK-LWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 688 ~~~~~~~~-~~~-l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
.-.+++.. ++. +++.|+.+ ..+.+||..+..
T Consensus 292 ~v~~~~~~~~~~~~l~~g~~d-----g~i~vwd~~~~~ 324 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAGYEN-----GMLAQWDLRSPE 324 (420)
T ss_dssp CEEEEEECSSCTTEEEEEETT-----SEEEEEETTCTT
T ss_pred CceeEEEeCCCCCEEEEEeCC-----CeEEEEEcCCCc
Confidence 11222222 444 77777744 368888887753
No 174
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.29 E-value=0.28 Score=51.97 Aligned_cols=219 Identities=12% Similarity=0.194 Sum_probs=110.2
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 554 (748)
+.+..+|..+++...+-.+........++.. ++..++.|+.+ ..+..||..+++-...-.-. .....+...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~~~~~~~~h--~~~v~~~s~ 197 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSH--SARVGSLSW 197 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCC--SSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCcEEEEEeCC--CCceEEEee
Confidence 4688999999887665444433322333333 67778888855 36888999887643322212 222344556
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEE--EECCEEEEEccCCCCcccCeEEEEECCCCc--E
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVI--AFDSYVYALGGHDGLSIFDSVERYDPKTDE--W 630 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W 630 (748)
++.+.+.|+.+ ..+..+|.......... +.......... .-++..++.||.++ .+..+|..+.+ +
T Consensus 198 ~~~~l~sgs~d-----~~i~~~d~~~~~~~~~~-~~~h~~~~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~~~~~ 266 (420)
T 4gga_A 198 NSYILSSGSRS-----GHIHHHDVRVAEHHVAT-LSGHSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPGEGGW 266 (420)
T ss_dssp ETTEEEEEETT-----SEEEEEETTSSSCEEEE-EECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCCSSCS
T ss_pred CCCEEEEEeCC-----CceeEeeecccceeeEE-ecccccceeeeeecCCCCeeeeeeccc-----cceEEeeccccccc
Confidence 77788888754 45667776554322111 11111111111 12556666666543 46667765543 1
Q ss_pred EEccCCCCCCcceeEEEE---CCEEEEEe-ccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeC
Q psy10286 631 TSVKPMLTKRCRLGVAAL---NNKIYVCG-GYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGG 704 (748)
Q Consensus 631 ~~~~~~p~~r~~~~~~~~---~~~i~v~G-G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG 704 (748)
..+...........+... +..+++.| |... ..|.+||..+.+-...-... ....+++.. ++.+++.+|
T Consensus 267 ~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D----~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv~~sg 340 (420)
T 4gga_A 267 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD----RHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISGHG 340 (420)
T ss_dssp CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT----CEEEEEETTTTEEEEEEECS--SCEEEEEEETTTTEEEEEEC
T ss_pred eeeeeecccCCceeeeeeCCCcccEEEEEeecCC----CEEEEEeCCccccceeeccc--cceeeeeecCCCCeEEEEEe
Confidence 111111111111122222 34455544 4321 46889998887644332211 112222222 455655556
Q ss_pred CCCCCCCCeEEEEeCCCCc
Q psy10286 705 YDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~~ 723 (748)
..+ ..|.+||..+.+
T Consensus 341 ~~d----~~I~iwd~~~~~ 355 (420)
T 4gga_A 341 FAQ----NQLVIWKYPTMA 355 (420)
T ss_dssp TTT----CCEEEEETTTCC
T ss_pred cCC----CEEEEEECCCCc
Confidence 432 358888886643
No 175
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.27 E-value=0.23 Score=52.58 Aligned_cols=213 Identities=18% Similarity=0.153 Sum_probs=105.5
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL- 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~- 554 (748)
..+..||..+++....-.. ....-.+++.. ++.+++.||.++ .+..||..+.+-. ..+......-.++.+
T Consensus 130 g~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~~l~sgs~D~-----~i~iwd~~~~~~~--~~~~~h~~~V~~v~~~ 201 (410)
T 1vyh_C 130 ATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGKLLASCSADM-----TIKLWDFQGFECI--RTMHGHDHNVSSVSIM 201 (410)
T ss_dssp SCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSSEEEEEETTS-----CCCEEETTSSCEE--ECCCCCSSCEEEEEEC
T ss_pred CeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCcee--EEEcCCCCCEEEEEEe
Confidence 4677888877654221110 11111222222 567788888653 4667787765432 222211112222222
Q ss_pred -CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEE--ECCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 555 -NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIA--FDSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 555 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
++..++.||.+ ..+..||..++.-... +.........+. -++.+++.|+.++ .+..||..+.+..
T Consensus 202 p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 202 PNGDHIVSASRD-----KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSNDQ-----TVRVWVVATKECK 269 (410)
T ss_dssp SSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcee
Confidence 56677777755 4688899887653221 111111112222 2567777777653 5778888776543
Q ss_pred EccCCCCCCcceeEEEE----------------------CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcc
Q psy10286 632 SVKPMLTKRCRLGVAAL----------------------NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSR 689 (748)
Q Consensus 632 ~~~~~p~~r~~~~~~~~----------------------~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 689 (748)
..- ........++.+ .+.+++.|+.+ ..+.+||..+..=.. .+......
T Consensus 270 ~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D-----~~i~iwd~~~~~~~~--~~~~h~~~ 340 (410)
T 1vyh_C 270 AEL--REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD-----KTIKMWDVSTGMCLM--TLVGHDNW 340 (410)
T ss_dssp EEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT-----SEEEEEETTTTEEEE--EEECCSSC
T ss_pred eEe--cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC-----CeEEEEECCCCceEE--EEECCCCc
Confidence 321 000111111111 25567777654 468899987764221 11111111
Q ss_pred eEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 690 VALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 690 ~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
...+.+ +++.++.||.+ ..|.+||..++.
T Consensus 341 v~~v~~~~~g~~l~s~s~D-----~~i~vwd~~~~~ 371 (410)
T 1vyh_C 341 VRGVLFHSGGKFILSCADD-----KTLRVWDYKNKR 371 (410)
T ss_dssp EEEEEECSSSSCEEEEETT-----TEEEEECCTTSC
T ss_pred EEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCc
Confidence 222222 56677777744 368888876643
No 176
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.27 E-value=0.091 Score=60.81 Aligned_cols=190 Identities=15% Similarity=0.195 Sum_probs=107.1
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--C--CEEEEEeCCCCCCCCceEEEEeCCCCeE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL--N--DKLYVCGGYDGVSSLNTVECYEPDKDQW 583 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~W 583 (748)
++..++.||.+ ..+..||..++++..+..+......-.++.+ + +..++.||.+ ..+..||..++.|
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~~~ 89 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 89 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCCcc
Confidence 45556667644 3678888877777766554433333333333 3 6777888765 3688899999988
Q ss_pred EEccCCCCCCcceEEEEE--C--CEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-----------
Q psy10286 584 RIVKSMQKHRSAGGVIAF--D--SYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL----------- 648 (748)
Q Consensus 584 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~----------- 648 (748)
.....+.........+.+ + +.+++.||.++ .+..||..+..-...............+.+
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 777655443333333333 3 67788887643 688888876521111001111111122222
Q ss_pred ----CCEEEEEeccCCCccccEEEEEeCCCC--cEEEccCCCCCCcceEEEEE--C---CEEEEEeCCCCCCCCCeEEEE
Q psy10286 649 ----NNKIYVCGGYDGAIFLQSVEMYDPITD--EWKMIASMNVMRSRVALVAN--M---GKLWAIGGYDGVSNLPTVEVY 717 (748)
Q Consensus 649 ----~~~i~v~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~l~v~GG~~~~~~~~~v~~y 717 (748)
++..++.|+.++ .|.+||..+. .+..+..+........++.. + +++++.||.++ .+.+|
T Consensus 165 ~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg-----~I~iw 234 (753)
T 3jro_A 165 NGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCIIW 234 (753)
T ss_dssp --CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS-----CEEEE
T ss_pred ccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC-----EEEEe
Confidence 356777777653 4777776543 45544433332223333333 4 78888888653 58888
Q ss_pred eCCCC
Q psy10286 718 DPSTD 722 (748)
Q Consensus 718 d~~~~ 722 (748)
|..++
T Consensus 235 d~~~~ 239 (753)
T 3jro_A 235 TQDNE 239 (753)
T ss_dssp EESSS
T ss_pred cCCCC
Confidence 88765
No 177
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.27 E-value=0.59 Score=48.95 Aligned_cols=194 Identities=13% Similarity=0.083 Sum_probs=99.5
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEE-----ccCCC-CCcceeEEEEE-CC-EEEEEeCCCCCCCCceEEEEeCC
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNK-----VSPMC-FKRSAVGAAAL-ND-KLYVCGGYDGVSSLNTVECYEPD 579 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-----~~~~~-~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~ 579 (748)
++.+++.|+.+ ..+..||..++.... +..+. ....-.+++.. ++ .+++.|+.+ ..+..||..
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~ 162 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-----NVILVWDVG 162 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-----SCEEEEETT
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-----CEEEEEECC
Confidence 56778888754 468888888764311 11111 11112223332 43 577777755 368899998
Q ss_pred CCeEEEccC-CCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEcc-CCC-CCCcceeEEEECCEEEEE
Q psy10286 580 KDQWRIVKS-MQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVK-PML-TKRCRLGVAALNNKIYVC 655 (748)
Q Consensus 580 ~~~W~~~~~-~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p-~~r~~~~~~~~~~~i~v~ 655 (748)
+++....-. ......-.+++.. ++..++.|+.+ ..+..||+.+.+-...- ... ..+....+..-++++++.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT 237 (402)
T ss_dssp TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEE
T ss_pred CCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEE
Confidence 886543321 1111111222222 66777777764 36999999887644322 111 111222222336787777
Q ss_pred eccCCCccccEEEEEeCCCCcE-EEccCCCCCCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 656 GGYDGAIFLQSVEMYDPITDEW-KMIASMNVMRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 656 GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
|.... ....+.+||..+..- .....+.....-..++.. +..+++.|+.++ .+.+||..++.
T Consensus 238 g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg-----~i~i~d~~~~~ 301 (402)
T 2aq5_A 238 GFSRM--SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS-----SIRYFEITSEA 301 (402)
T ss_dssp EECTT--CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS-----CEEEEEECSST
T ss_pred eccCC--CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC-----eEEEEEecCCC
Confidence 73111 125788999876431 111111112222223332 345666665432 58888887765
No 178
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.23 E-value=0.16 Score=52.40 Aligned_cols=232 Identities=10% Similarity=0.040 Sum_probs=108.6
Q ss_pred eEEEEeCCCCceEEccCCCcccceeEEEEE-CC-EEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC-CcceeEEEEE
Q psy10286 478 TVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KN-RLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF-KRSAVGAAAL 554 (748)
Q Consensus 478 ~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~-~r~~~~~~~~ 554 (748)
.+|.+|+.+++++.+... ....-..++.. ++ .||+.+..+.....-.+|.+|..+++.+.+...+. .......+.
T Consensus 30 ~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~- 107 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT- 107 (361)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-
T ss_pred EEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-
Confidence 467778888888776544 21111122222 34 57776653211222345666777777776654432 222233333
Q ss_pred CC-EEEEEeCCCCCCCCceEEEEeCCCCe-EEEc-------cCCCCC-C----cceEEEEE-CC-EEEEEccCCCCcccC
Q psy10286 555 ND-KLYVCGGYDGVSSLNTVECYEPDKDQ-WRIV-------KSMQKH-R----SAGGVIAF-DS-YVYALGGHDGLSIFD 618 (748)
Q Consensus 555 ~~-~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~-------~~~~~~-r----~~~~~~~~-~~-~iyv~GG~~~~~~~~ 618 (748)
++ .+|+.+..+ ..+..|+..++. ...+ ..-+.+ | .-|+++.. ++ .+|+.+.. .+
T Consensus 108 dg~~l~~~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-----~~ 177 (361)
T 3scy_A 108 NGKNIVTANYSG-----GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG-----TD 177 (361)
T ss_dssp CSSEEEEEETTT-----TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-----TT
T ss_pred CCCEEEEEECCC-----CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-----CC
Confidence 55 566654322 467788875432 1111 111110 1 11334433 44 57776533 23
Q ss_pred eEEEEECCCCc-------EEEc-----cCCCCCCcceeEEEE-CC-EEEEEeccCCCccccEEEEEeCCCCcEEEccC--
Q psy10286 619 SVERYDPKTDE-------WTSV-----KPMLTKRCRLGVAAL-NN-KIYVCGGYDGAIFLQSVEMYDPITDEWKMIAS-- 682 (748)
Q Consensus 619 ~~~~yd~~~~~-------W~~~-----~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~-- 682 (748)
.+..|+..... .... ...+....-..++.. ++ .+|+.+.. .+.+.+||..+.++..+..
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~~v~v~~~~~g~~~~~~~~~ 252 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-----GGTVIAFRYADGMLDEIQTVA 252 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----TCEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-----CCeEEEEEecCCceEEeEEEe
Confidence 56777655433 2111 111111111222222 44 57776532 2568888888777755533
Q ss_pred -CCCCCcceEEEEE--CC-EEEEEeCCCCCCCCCeEEEEeC--CCCceEecCCC
Q psy10286 683 -MNVMRSRVALVAN--MG-KLWAIGGYDGVSNLPTVEVYDP--STDSWAFVAPM 730 (748)
Q Consensus 683 -~p~~r~~~~~~~~--~~-~l~v~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~ 730 (748)
.+........+.+ ++ .||+.+.. + .+.+.+|+. .+++++.+..+
T Consensus 253 ~~~~~~~~~~~i~~spdg~~l~v~~~~-~---~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 253 ADTVNAQGSGDIHLSPDGKYLYASNRL-K---ADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp SCSSCCCCEEEEEECTTSSEEEEEECS-S---SCEEEEEEECTTTCCEEEEEEE
T ss_pred cCCCCCCCcccEEECCCCCEEEEECCC-C---CCEEEEEEEcCCCCcEEEeeEe
Confidence 2322222223333 45 46655432 0 235666655 56776655443
No 179
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.22 E-value=0.34 Score=49.60 Aligned_cols=224 Identities=12% Similarity=0.092 Sum_probs=107.7
Q ss_pred ceEEEEeCCCCceEEccCCCcccce-eEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSR-VGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 554 (748)
..+..||..+++-... +...... .+++.. ++..++.|+.+ ..+..||..+.+....-..+. .-.+++..
T Consensus 54 g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~--~v~~~~~~ 124 (369)
T 3zwl_B 54 SSASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSNGQCVATWKSPV--PVKRVEFS 124 (369)
T ss_dssp SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECSS--CEEEEEEC
T ss_pred CEEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEEEeecCC--CeEEEEEc
Confidence 4678888877654322 1111111 222222 56667777754 468899988876544322221 12222222
Q ss_pred -CCEEEEEeCCCCCCCCceEEEEeCCCCe----EEEccCCCC-----CCc--ceEEEEE--CCEEEEEccCCCCcccCeE
Q psy10286 555 -NDKLYVCGGYDGVSSLNTVECYEPDKDQ----WRIVKSMQK-----HRS--AGGVIAF--DSYVYALGGHDGLSIFDSV 620 (748)
Q Consensus 555 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~----W~~~~~~~~-----~r~--~~~~~~~--~~~iyv~GG~~~~~~~~~~ 620 (748)
++..++.|+.+.......+..||..+.. +......+. ... ....+.+ ++..++.|+.+ ..+
T Consensus 125 ~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i 199 (369)
T 3zwl_B 125 PCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-----GKI 199 (369)
T ss_dssp TTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-----SEE
T ss_pred cCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-----CEE
Confidence 5666666654422222466777755432 222211111 000 1222222 55666777664 368
Q ss_pred EEEECCC-CcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEE-EC
Q psy10286 621 ERYDPKT-DEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVA-NM 696 (748)
Q Consensus 621 ~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~ 696 (748)
..||..+ .+-... +.........+.+ ++..++.|+.+ ..+.+||..+.+....-.. ......++. -+
T Consensus 200 ~i~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~--~~~~~~~~~~~~ 270 (369)
T 3zwl_B 200 SKYDVSNNYEYVDS--IDLHEKSISDMQFSPDLTYFITSSRD-----TNSFLVDVSTLQVLKKYET--DCPLNTAVITPL 270 (369)
T ss_dssp EEEETTTTTEEEEE--EECCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEEC--SSCEEEEEECSS
T ss_pred EEEECCCCcEeEEE--EecCCCceeEEEECCCCCEEEEecCC-----ceEEEEECCCCceeeeecC--CCCceeEEecCC
Confidence 9999987 332221 1111222222333 56677777654 4788999887664433221 111122222 25
Q ss_pred CEEEEEeCCCCCC---------CCCeEEEEeCCCCc
Q psy10286 697 GKLWAIGGYDGVS---------NLPTVEVYDPSTDS 723 (748)
Q Consensus 697 ~~l~v~GG~~~~~---------~~~~v~~yd~~~~~ 723 (748)
++.+++|+.++.. ....+.+||..+..
T Consensus 271 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 271 KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp SSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred CceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 5666666544321 11257888876654
No 180
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.21 E-value=0.29 Score=50.31 Aligned_cols=169 Identities=15% Similarity=0.213 Sum_probs=88.9
Q ss_pred ceEEEEeCCCCceEEccCCCc--ccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSM--LRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAA 553 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~--~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~ 553 (748)
..+..+|..+++|.....+.. ...-.+++.. ++..++.|+.++ .+..||..+..+..+..+......-.++.
T Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~h~~~v~~v~ 112 (345)
T 3fm0_A 38 RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQDDFECVTTLEGHENEVKSVA 112 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECCC-EEEEEEECCCSSCEEEEE
T ss_pred CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccCCCeEEEEEccCCCCCceEEE
Confidence 457778887777753322211 1111222222 667777887553 46677777776655443332222222222
Q ss_pred E--CCEEEEEeCCCCCCCCceEEEEeCCCC-eEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCC
Q psy10286 554 L--NDKLYVCGGYDGVSSLNTVECYEPDKD-QWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTD 628 (748)
Q Consensus 554 ~--~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 628 (748)
+ +++.++.|+.+ ..+..||..+. .+..+..+.........+.+ ++.+++.|+.++ .+..||..+.
T Consensus 113 ~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~-----~i~~w~~~~~ 182 (345)
T 3fm0_A 113 WAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD-----TVKLYREEED 182 (345)
T ss_dssp ECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS-----CEEEEEEETT
T ss_pred EeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC-----cEEEEEecCC
Confidence 2 67777888765 35777887654 23333222222222222222 567777777654 5788888888
Q ss_pred cEEEccCCCCCCcceeEEEE--CCEEEEEeccCC
Q psy10286 629 EWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDG 660 (748)
Q Consensus 629 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 660 (748)
.|.....+.........+.+ +++.++.|+.++
T Consensus 183 ~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 183 DWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp EEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 88755433322222233333 567777887654
No 181
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.20 E-value=0.54 Score=48.43 Aligned_cols=217 Identities=16% Similarity=0.156 Sum_probs=108.0
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCC-----CCcceeE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC-----FKRSAVG 550 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~-----~~r~~~~ 550 (748)
..+..+|..+......-..+.... .+++.. ++..++.||.+ ..+..|+.....-....... ....-.+
T Consensus 86 g~v~vWd~~~~~~~~~~~~~~~~v-~~~~~sp~g~~lasg~~d-----~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~ 159 (354)
T 2pbi_B 86 GKVIVWDSFTTNKEHAVTMPCTWV-MACAYAPSGCAIACGGLD-----NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSA 159 (354)
T ss_dssp SEEEEEETTTCCEEEEEECSSSCC-CEEEECTTSSEEEEESTT-----SEEEEEECCCCTTCCSGGGCEEEEECSSCEEE
T ss_pred CeEEEEECCCCCcceEEecCCCCE-EEEEECCCCCEEEEeeCC-----CCEEEEEEeccccccccccceeeeccCCcEEE
Confidence 457778877665543322222111 222222 67777888865 35666765432100000000 0011112
Q ss_pred EEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcce-EEEEE---CCEEEEEccCCCCcccCeEEEEEC
Q psy10286 551 AAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAG-GVIAF---DSYVYALGGHDGLSIFDSVERYDP 625 (748)
Q Consensus 551 ~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~ 625 (748)
+... ++..++.|+.+ ..+..||..+.+-... +......- ++... ++..++.|+.++ .+..||.
T Consensus 160 ~~~~~~~~~l~t~s~D-----~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg-----~v~~wd~ 227 (354)
T 2pbi_B 160 CSFTNSDMQILTASGD-----GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCDK-----KAMVWDM 227 (354)
T ss_dssp EEECSSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETTS-----CEEEEET
T ss_pred EEEeCCCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCCC-----eEEEEEC
Confidence 2222 44455556543 4688899887764322 11111111 11221 356777887754 5888999
Q ss_pred CCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEE
Q psy10286 626 KTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWA 701 (748)
Q Consensus 626 ~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v 701 (748)
.+.+....- ........++.+ ++..++.||.+ ..+.+||..+..-...-...........+.. ++++++
T Consensus 228 ~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 300 (354)
T 2pbi_B 228 RSGQCVQAF--ETHESDVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF 300 (354)
T ss_dssp TTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred CCCcEEEEe--cCCCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEE
Confidence 887654321 111122223333 56777888765 3678899877643322111111222333333 677777
Q ss_pred EeCCCCCCCCCeEEEEeCCCCc
Q psy10286 702 IGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 702 ~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
.|+.+ ..+.+||..++.
T Consensus 301 ~g~~d-----~~i~vwd~~~~~ 317 (354)
T 2pbi_B 301 AGYND-----YTINVWDVLKGS 317 (354)
T ss_dssp EEETT-----SCEEEEETTTCS
T ss_pred EEECC-----CcEEEEECCCCc
Confidence 77744 358899986654
No 182
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.17 E-value=1 Score=45.58 Aligned_cols=225 Identities=9% Similarity=0.032 Sum_probs=119.7
Q ss_pred ceEEEEeCCCCceEEccCCC------------------cccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeE
Q psy10286 477 STVEVFDPLVGRWQMAEAMS------------------MLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVW 536 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~------------------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 536 (748)
..+++||+.++++....... ....-++++.. ++.|||.... ..+.+||+.+++.
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 56888998887765432110 01123455555 5789987431 2488899887765
Q ss_pred EEccCCCCC---cceeEEEEE--CCEEEEEeCCCC------------CCCCceEEEEeCCCCeEEEcc-CCCCCCcceEE
Q psy10286 537 NKVSPMCFK---RSAVGAAAL--NDKLYVCGGYDG------------VSSLNTVECYEPDKDQWRIVK-SMQKHRSAGGV 598 (748)
Q Consensus 537 ~~~~~~~~~---r~~~~~~~~--~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~~ 598 (748)
+.+...... ..-..+++- +|.||+.-.... ......+++||+.+.+.+... .+..| ..+
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p---~gi 190 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP---GGA 190 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC---CEE
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC---cce
Confidence 554321111 112333433 578998643210 012357999999888765442 12111 233
Q ss_pred EEE-C-CEEEEEccCCCCcccCeEEEEECCC---CcEEEccCCCCCCcceeEEEE-CCEEEEEeccCCC-----ccccEE
Q psy10286 599 IAF-D-SYVYALGGHDGLSIFDSVERYDPKT---DEWTSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGA-----IFLQSV 667 (748)
Q Consensus 599 ~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~-----~~~~~v 667 (748)
+.. + +.+|+.-.. .+.+++||+.. .+++.+..++. -.+++.- +|.|||....... .....+
T Consensus 191 a~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v 262 (322)
T 2fp8_A 191 EVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRNADGHFWVSSSEELDGNMHGRVDPKG 262 (322)
T ss_dssp EECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEECSS---EEEEEECTTSCEEEEEEEETTSSTTSCEEEEE
T ss_pred EECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEeCCC---CCCeEECCCCCEEEEecCcccccccCCCccEE
Confidence 333 3 368887432 35799999875 23444333222 2233332 5678887642100 113568
Q ss_pred EEEeCCCCcEEEccCCCC--CCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 668 EMYDPITDEWKMIASMNV--MRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 668 ~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
.+||+....-..+..... .....+++..+++|||.+.. .+.|.+|++..+.
T Consensus 263 ~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~-----~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 263 IKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLF-----HGSVGILVYDKKG 315 (322)
T ss_dssp EEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSS-----CSEEEEEEC----
T ss_pred EEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecC-----CCceEEEeccccc
Confidence 999997554444432111 12223444568999987542 2578999886543
No 183
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.16 E-value=0.17 Score=52.24 Aligned_cols=215 Identities=14% Similarity=0.074 Sum_probs=106.8
Q ss_pred ceEEEEeCCCCceEEccCC--C-cccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAM--S-MLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAA 552 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~--~-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 552 (748)
..+..||..+++-...... . ....-.+++.. ++..++.|+.+ ..+..+|..+++-...-.-.. ..-.+++
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-----~~i~iwd~~~~~~~~~~~~h~-~~V~~~~ 176 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-----ICIKVWDLAQQVVLSSYRAHA-AQVTCVA 176 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCCS-SCEEEEE
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEcCcC-CceEEEE
Confidence 4678888877653221110 0 11111222222 67777888755 358889998875332211111 1112222
Q ss_pred EE-C-CEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcce-EEEEE--CCEEEEEccCCCCcccCeEEEEECCC
Q psy10286 553 AL-N-DKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAG-GVIAF--DSYVYALGGHDGLSIFDSVERYDPKT 627 (748)
Q Consensus 553 ~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 627 (748)
.. + ..+++.|+.+ ..+..||..+.+-...-......... +++.. ++.+++.|+.++ .+..||..+
T Consensus 177 ~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~~~ 246 (344)
T 4gqb_B 177 ASPHKDSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG-----TVSLVDTKS 246 (344)
T ss_dssp ECSSCTTEEEEEETT-----SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS-----EEEEEESCC
T ss_pred ecCCCCCceeeeccc-----cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC-----cEEEEECCC
Confidence 22 3 3577778765 35788998876533221111111111 22222 567888887643 588899876
Q ss_pred CcEEEccCCCCCCcceeEEEE--CC-EEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE---CCEEEE
Q psy10286 628 DEWTSVKPMLTKRCRLGVAAL--NN-KIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN---MGKLWA 701 (748)
Q Consensus 628 ~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~l~v 701 (748)
.+ .+..+.........+.+ ++ ++++.|+.+ ..|.+||..+.+-..+.. . ......+.. +..+++
T Consensus 247 ~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D-----~~i~vwd~~~~~~~~~~~--H-~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 247 TS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSED-----CSLAVLDSSLSELFRSQA--H-RDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp ----CCEEEECCSSCEEEEEECSSSSCCEEEEETT-----SCEEEECTTCCEEEEECC--C-SSCEEEEEECSSSTTEEE
T ss_pred Cc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCCcEEEEcC--C-CCCEEEEEEeCCCCeEEE
Confidence 53 12222211222223333 33 567777755 358889988775433321 1 111222322 456777
Q ss_pred EeCCCCCCCCCeEEEEeCCCC
Q psy10286 702 IGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 702 ~GG~~~~~~~~~v~~yd~~~~ 722 (748)
.||.++ .|.+++..+.
T Consensus 317 s~s~D~-----~v~~w~v~~~ 332 (344)
T 4gqb_B 317 TVGWDH-----QVVHHVVPTE 332 (344)
T ss_dssp EEETTS-----CEEEEECCC-
T ss_pred EEcCCC-----eEEEEECCCC
Confidence 788654 4777776553
No 184
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.15 E-value=0.26 Score=50.18 Aligned_cols=143 Identities=15% Similarity=0.063 Sum_probs=71.9
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEE-CC-EEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC-----Ccce
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KN-RLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF-----KRSA 548 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~-----~r~~ 548 (748)
...++.+|+.+++....-..+....-+.++.. ++ .+|+.++. ...+++||+.+++....-..+. ...-
T Consensus 20 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~ 94 (349)
T 1jmx_B 20 PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNTFHANLSSVPGEVGRSM 94 (349)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEEEEESCCSTTEEEECS
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEEEEEEcccccccccccc
Confidence 46799999998876443333321012233333 44 57877642 2479999999887543322221 1112
Q ss_pred eEEEEE-CC-EEEEEeCC---CCC---CCCceEEEEeCCCCeEEE-ccCCCCCCcceEEEE-ECCEEEEEccCCCCcccC
Q psy10286 549 VGAAAL-ND-KLYVCGGY---DGV---SSLNTVECYEPDKDQWRI-VKSMQKHRSAGGVIA-FDSYVYALGGHDGLSIFD 618 (748)
Q Consensus 549 ~~~~~~-~~-~iyv~GG~---~~~---~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 618 (748)
++++.. +| .+|+.+.. ... .....+..||+.+++-.. +...+.++.-.+++. -++++|+.++
T Consensus 95 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~~-------- 166 (349)
T 1jmx_B 95 YSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGP-------- 166 (349)
T ss_dssp SCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESS--------
T ss_pred cceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEccC--------
Confidence 233333 45 55555421 000 012578899987633111 111112222223333 3566777432
Q ss_pred eEEEEECCCCcEE
Q psy10286 619 SVERYDPKTDEWT 631 (748)
Q Consensus 619 ~~~~yd~~~~~W~ 631 (748)
++..+|+.+.+-.
T Consensus 167 ~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 167 DIYKMDVKTGKYT 179 (349)
T ss_dssp SEEEECTTTCCEE
T ss_pred cEEEEeCCCCcee
Confidence 3888888777644
No 185
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.15 E-value=0.25 Score=54.63 Aligned_cols=227 Identities=9% Similarity=0.033 Sum_probs=116.2
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEE-C-CEEEEEccCCCCCCCCeEEEEEC--CCCeEEEccCCCCCcceeEE
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-K-NRLYAFGGYNGSERLSTVEEFDP--VRRVWNKVSPMCFKRSAVGA 551 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~--~t~~W~~~~~~~~~r~~~~~ 551 (748)
...+..+|..+++-...-.. ...-|+++.. + .++|+.+. + +.+..||+ .+.+- +..++....-.++
T Consensus 158 d~~V~v~D~~t~~~~~~i~~--g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~~~--~~~i~~g~~p~~v 227 (543)
T 1nir_A 158 AGQIALVDGDSKKIVKVIDT--GYAVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEPTK--VAEIKIGIEARSV 227 (543)
T ss_dssp GTEEEEEETTTCCEEEEEEC--STTEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSCEE--EEEEECCSEEEEE
T ss_pred CCeEEEEECCCceEEEEEec--CcccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCCcE--EEEEecCCCcceE
Confidence 35688889988765332111 1123444443 4 46676553 2 67999999 66543 2233333333344
Q ss_pred EEE-----CC-EEEEEeCCCCCCCCceEEEEeCCCCeEEEccCC-----------CCCCcceEEEEE-CCEEEEEccCCC
Q psy10286 552 AAL-----ND-KLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSM-----------QKHRSAGGVIAF-DSYVYALGGHDG 613 (748)
Q Consensus 552 ~~~-----~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-----------~~~r~~~~~~~~-~~~iyv~GG~~~ 613 (748)
+.. +| .+|+.+.. -+.+.++|..+.+-...-+. +.+|....+... ++.+|+.+..
T Consensus 228 a~sp~~~~dg~~l~v~~~~-----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-- 300 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGAYW-----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-- 300 (543)
T ss_dssp EECCSTTCTTTEEEEEEEE-----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT--
T ss_pred EeCCCcCCCCCEEEEEEcc-----CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC--
Confidence 443 45 45554321 25678889877653322111 112222222222 4455555433
Q ss_pred CcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CCE-EEEEeccCCCccccEEEEEeCCCCcEEEc---cCCCCCCc
Q psy10286 614 LSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NNK-IYVCGGYDGAIFLQSVEMYDPITDEWKMI---ASMNVMRS 688 (748)
Q Consensus 614 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~---~~~p~~r~ 688 (748)
...++.+|..+.+-..+...+..+.-+..+.- +++ +|+.+.. .+.|.++|.++.+-... +..|.+..
T Consensus 301 ---~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg~l~~~i~~g~~ph~g~ 372 (543)
T 1nir_A 301 ---TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDRRLSALVDVGKTPHPGR 372 (543)
T ss_dssp ---TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTTEEEEEEECSSSBCCTT
T ss_pred ---CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCCeEEEeeccCCCCCCCC
Confidence 35788999876432111122233333444433 454 5554422 36788999998865432 33444433
Q ss_pred ceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCC-----ceEecCCCC
Q psy10286 689 RVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTD-----SWAFVAPMC 731 (748)
Q Consensus 689 ~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~-----~W~~~~~~~ 731 (748)
+.....- ++.+|+.+.... .+|.++|..+. .|+.+..++
T Consensus 373 g~~~~~p~~g~~~~s~~~~d----~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 373 GANFVHPKYGPVWSTSHLGD----GSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp CEEEEETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred CcccCCCCCccEEEeccCCC----ceEEEEEeCCCCCchhcCeEEEEEE
Confidence 3333222 478888765322 36888887762 377655544
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.14 E-value=0.66 Score=45.95 Aligned_cols=186 Identities=9% Similarity=-0.027 Sum_probs=100.3
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCCCCcceeEEEE-ECCEEEEEeCCCCCCCCceEEEEeCCCC-eE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMCFKRSAVGAAA-LNDKLYVCGGYDGVSSLNTVECYEPDKD-QW 583 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W 583 (748)
.+++++.|.. ...+..+|+.+++ |+.-.. .....|.+.. -+|++++.+. +.+..||+..+ .|
T Consensus 4 ~~~~lv~~~~-----~~~v~~~d~~tG~~~w~~~~~--~~~~~~~~~~~pdG~ilvs~~-------~~V~~~d~~G~~~W 69 (276)
T 3no2_A 4 PQHLLVGGSG-----WNKIAIINKDTKEIVWEYPLE--KGWECNSVAATKAGEILFSYS-------KGAKMITRDGRELW 69 (276)
T ss_dssp CCEEEEECTT-----CSEEEEEETTTTEEEEEEECC--TTCCCCEEEECTTSCEEEECB-------SEEEEECTTSCEEE
T ss_pred CCcEEEeeCC-----CCEEEEEECCCCeEEEEeCCC--ccCCCcCeEECCCCCEEEeCC-------CCEEEECCCCCEEE
Confidence 3567776653 2578899987775 765432 1112233334 4888888432 46999999332 37
Q ss_pred EEccCCCCCCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCc-EEEc-c-CCCC--CCcceeEEEECCEEEEEec
Q psy10286 584 RIVKSMQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDE-WTSV-K-PMLT--KRCRLGVAALNNKIYVCGG 657 (748)
Q Consensus 584 ~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~-~-~~p~--~r~~~~~~~~~~~i~v~GG 657 (748)
+.-.+. ....+++.. .+|.+++..+.+ ...++.+|+.... |+.- . ..+. ..........++.+++...
T Consensus 70 ~~~~~~--~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~ 143 (276)
T 3no2_A 70 NIAAPA--GCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF 143 (276)
T ss_dssp EEECCT--TCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET
T ss_pred EEcCCC--CccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec
Confidence 765421 112233333 366666654421 1368888885442 4432 1 1111 1111222334666666653
Q ss_pred cCCCccccEEEEEeCCCC-cEEEccCCCCCCcceEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCCCCc--eEec
Q psy10286 658 YDGAIFLQSVEMYDPITD-EWKMIASMNVMRSRVALVA-NMGKLWAIGGYDGVSNLPTVEVYDPSTDS--WAFV 727 (748)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~~--W~~~ 727 (748)
. ...+.+||++-+ .|+.-.. . . .+++.. .++.++|.++.+ ..+..+|+++++ |+.-
T Consensus 144 ~-----~~~v~~~d~~G~~~w~~~~~-~--~-~~~~~~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 144 A-----TSEVREIAPNGQLLNSVKLS-G--T-PFSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp T-----TTEEEEECTTSCEEEEEECS-S--C-CCEEEECTTSCEEEECBTT-----SEEEEECTTTCCEEEEEE
T ss_pred C-----CCEEEEECCCCCEEEEEECC-C--C-ccceeEcCCCCEEEEeCCC-----CeEEEEeCcCCcEEEEec
Confidence 2 257899998733 2654322 1 1 223333 478888876532 369999999654 6653
No 187
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.13 E-value=0.71 Score=51.29 Aligned_cols=269 Identities=14% Similarity=0.083 Sum_probs=129.7
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCC----c-eeeccc--cc-ccceEEec--ccccccCCCccceEEEEeCCCC---
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVG----R-WQMAEE--ET-LSNAVIST--KSCLTKAGDSLSTVEVFDPLVG--- 487 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~----~-W~~~~~--~~-~~~~~~~~--~~~~~~~g~~~~~~~~yd~~~~--- 487 (748)
++..+++|+. ..+..||..++ . -..+.. .. +....+.. ++.....|..-..+..||..++
T Consensus 29 dg~~l~~~~~-------~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~ 101 (615)
T 1pgu_A 29 TTNAIAYPCG-------KSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKES 101 (615)
T ss_dssp TTTEEEEEET-------TEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGG
T ss_pred CCCEEEEecC-------CeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccc
Confidence 4455555551 25778887765 2 222222 12 22233344 4433333333346777777544
Q ss_pred ---ceEEccCCCcccce-eEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCE-EEE
Q psy10286 488 ---RWQMAEAMSMLRSR-VGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDK-LYV 560 (748)
Q Consensus 488 ---~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~-iyv 560 (748)
....+..+...... .+++.. +++.++.||.+.. ....++.||.... -..+.. ....-.+++.. ++. +++
T Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~v~~~d~~~~-~~~~~~--~~~~v~~~~~~~~~~~~l~ 177 (615)
T 1pgu_A 102 NSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD-NFGVFISWDSGNS-LGEVSG--HSQRINACHLKQSRPMRSM 177 (615)
T ss_dssp TEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS-CSEEEEETTTCCE-EEECCS--CSSCEEEEEECSSSSCEEE
T ss_pred ccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC-CccEEEEEECCCc-ceeeec--CCccEEEEEECCCCCcEEE
Confidence 33333222211111 222222 5566666664321 2346777773321 111111 11111222222 443 677
Q ss_pred EeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCc---c-eEEEEE-C-CEEEEEccCCCCcccCeEEEEECCCCcEEEcc
Q psy10286 561 CGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRS---A-GGVIAF-D-SYVYALGGHDGLSIFDSVERYDPKTDEWTSVK 634 (748)
Q Consensus 561 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~---~-~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 634 (748)
.|+.+ ..+..||..+.+-... +..... . .+++.. + +..++.|+.++ .+..||..+.+....-
T Consensus 178 ~~~~d-----~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 178 TVGDD-----GSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----KISCFDGKSGEFLKYI 245 (615)
T ss_dssp EEETT-----TEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----CEEEEETTTCCEEEEC
T ss_pred EEeCC-----CcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCCCEeEEe
Confidence 77754 4688888776553322 221111 2 222222 5 67777777643 6889998877654332
Q ss_pred CCC--CCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCC-C--CCcceEEEEECCEEEEEeCCCCC
Q psy10286 635 PML--TKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMN-V--MRSRVALVANMGKLWAIGGYDGV 708 (748)
Q Consensus 635 ~~p--~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~--~r~~~~~~~~~~~l~v~GG~~~~ 708 (748)
..+ ........+.+ ++..++.|+.+ ..+.+||..+.+....-..+ . .....++...++..++.|+.+
T Consensus 246 ~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 318 (615)
T 1pgu_A 246 EDDQEPVQGGIFALSWLDSQKFATVGAD-----ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD-- 318 (615)
T ss_dssp CBTTBCCCSCEEEEEESSSSEEEEEETT-----SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETT--
T ss_pred cccccccCCceEEEEEcCCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECC--
Confidence 110 11111222222 77777887754 46889999877654332211 1 111222333366667777654
Q ss_pred CCCCeEEEEeCCCC
Q psy10286 709 SNLPTVEVYDPSTD 722 (748)
Q Consensus 709 ~~~~~v~~yd~~~~ 722 (748)
..+.+||..++
T Consensus 319 ---g~i~~~d~~~~ 329 (615)
T 1pgu_A 319 ---GTLNFYELGHD 329 (615)
T ss_dssp ---SCEEEEETTEE
T ss_pred ---CCEEEEECCCC
Confidence 35888888763
No 188
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.09 E-value=0.42 Score=54.05 Aligned_cols=239 Identities=13% Similarity=-0.015 Sum_probs=128.6
Q ss_pred cceEEEEeCC--C-CceEEccCCCc---ccceeEEEEE-CCEEEEEccCCC-----CCCCCeEEEEECCC------CeEE
Q psy10286 476 LSTVEVFDPL--V-GRWQMAEAMSM---LRSRVGVAVM-KNRLYAFGGYNG-----SERLSTVEEFDPVR------RVWN 537 (748)
Q Consensus 476 ~~~~~~yd~~--~-~~W~~~~~~~~---~r~~~~~~~~-~~~iyv~GG~~~-----~~~~~~v~~yd~~t------~~W~ 537 (748)
...+|.++.. . +....+...+. .....+.+.. +|+..+++..+. ......++.+|..+ .+..
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee
Confidence 4568888887 4 66666665431 1122222332 554444443221 12335799999988 6655
Q ss_pred Ecc-CCCCCcceeEEEEECCEEEEEeCCCCC-C--CCceEEEEeCC-CC---eEEEccCCCCCCcceEEEEE-CCEEEEE
Q psy10286 538 KVS-PMCFKRSAVGAAALNDKLYVCGGYDGV-S--SLNTVECYEPD-KD---QWRIVKSMQKHRSAGGVIAF-DSYVYAL 608 (748)
Q Consensus 538 ~~~-~~~~~r~~~~~~~~~~~iyv~GG~~~~-~--~~~~~~~yd~~-~~---~W~~~~~~~~~r~~~~~~~~-~~~iyv~ 608 (748)
.+. .-+ ......+..-+|+..++.+.+.. . ....++.+|.. ++ ....+..-.. ......+.. +|++|+.
T Consensus 181 ~l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~-~~~~~~~~spdg~l~~~ 258 (662)
T 3azo_A 181 ELSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE-EAIAQAEWAPDGSLIVA 258 (662)
T ss_dssp ESSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT-BCEEEEEECTTSCEEEE
T ss_pred EEEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC-ceEcceEECCCCeEEEE
Confidence 554 211 11111122226654444443321 1 23579999998 56 3443322111 111222222 6777777
Q ss_pred ccCCCCcccCeEEEEECCCCcEEEccCCCCCC----c---ceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEc
Q psy10286 609 GGHDGLSIFDSVERYDPKTDEWTSVKPMLTKR----C---RLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMI 680 (748)
Q Consensus 609 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~---~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 680 (748)
+..++ ...++.+|+.+.+|..+....... . ....+.. ++++++.+.. + ...+|.+|..+.....+
T Consensus 259 ~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 259 TDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G---AAVLGILDPESGELVDA 331 (662)
T ss_dssp ECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S---SCEEEEEETTTTEEEEC
T ss_pred ECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C---ccEEEEEECCCCcEEEe
Confidence 66543 247999999899998875432111 0 1123333 6777777754 2 46789999988887776
Q ss_pred cCCCCCCcceEE-EEECCEEEEEeCCCCCCCCCeEEEEeCCCCceEec
Q psy10286 681 ASMNVMRSRVAL-VANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 681 ~~~p~~r~~~~~-~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (748)
.... .....+ ..-++.+++..+... ....++.+|+.+++.+.+
T Consensus 332 ~~~~--~~~~~~~s~~~~~~~~~~~~~~--~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 332 AGPW--TEWAATLTVSGTRAVGVAASPR--TAYEVVELDTVTGRARTI 375 (662)
T ss_dssp CSSC--CEEEEEEEEETTEEEEEEEETT--EEEEEEEEETTTCCEEEE
T ss_pred cCCC--CeEEEEEecCCCEEEEEEcCCC--CCCEEEEEECCCCceEEe
Confidence 4321 111223 344677776654322 224688889888877665
No 189
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.07 E-value=0.51 Score=52.06 Aligned_cols=276 Identities=11% Similarity=0.004 Sum_probs=136.5
Q ss_pred cCcEEEEEcCccCCCCCCcceEeecCCCCceeeccc-ccccceE-Eeccc-ccccCCCccceEEEEeC--CCCceEEccC
Q psy10286 420 VMGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEE-ETLSNAV-ISTKS-CLTKAGDSLSTVEVFDP--LVGRWQMAEA 494 (748)
Q Consensus 420 ~~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~-~~~~~~~-~~~~~-~~~~~g~~~~~~~~yd~--~~~~W~~~~~ 494 (748)
-++.+|+.+..+ .++..+|..+++-...-. ....+.+ +..++ .++..+.. +.+..||. .+.+- +..
T Consensus 147 p~~~~~vs~~~d------~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~--~~~ 217 (543)
T 1nir_A 147 LPNLFSVTLRDA------GQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTK--VAE 217 (543)
T ss_dssp GGGEEEEEEGGG------TEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEE--EEE
T ss_pred CCCEEEEEEcCC------CeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcE--EEE
Confidence 356788876542 367888888776532211 1112222 34433 34444333 78999999 55543 222
Q ss_pred CCcccceeEEEEE-----CC-EEEEEccCCCCCCCCeEEEEECCCCeEEEc-cC--C--------CCCcceeEEEEE-CC
Q psy10286 495 MSMLRSRVGVAVM-----KN-RLYAFGGYNGSERLSTVEEFDPVRRVWNKV-SP--M--------CFKRSAVGAAAL-ND 556 (748)
Q Consensus 495 ~~~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~-~~--~--------~~~r~~~~~~~~-~~ 556 (748)
++....-..++.. ++ .+|+.+-. .+.+.++|..+.+-... +. + +.+|....+... ++
T Consensus 218 i~~g~~p~~va~sp~~~~dg~~l~v~~~~-----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~ 292 (543)
T 1nir_A 218 IKIGIEARSVESSKFKGYEDRYTIAGAYW-----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP 292 (543)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEEE-----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSS
T ss_pred EecCCCcceEEeCCCcCCCCCEEEEEEcc-----CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCC
Confidence 2222222333332 34 55554321 24688889887653322 21 1 112222222222 44
Q ss_pred EEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CC-EEEEEccCCCCcccCeEEEEECCCCcEEEc-
Q psy10286 557 KLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DS-YVYALGGHDGLSIFDSVERYDPKTDEWTSV- 633 (748)
Q Consensus 557 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~- 633 (748)
.+|+.+.. ...++.+|..+.+-..+..++..+.-+..+.. ++ ++|+.+.. .+.+..+|..+++-...
T Consensus 293 ~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 293 EFIVNVKE-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDRRLSALV 362 (543)
T ss_dssp EEEEEETT-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTTEEEEEE
T ss_pred EEEEEECC-----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCCeEEEee
Confidence 55555432 35788888876431111112223333334433 44 45555433 35788899998875442
Q ss_pred --cCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCC-----cEEEccCCCCCCcc-eEEEEE--CCEEEEE
Q psy10286 634 --KPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITD-----EWKMIASMNVMRSR-VALVAN--MGKLWAI 702 (748)
Q Consensus 634 --~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~-----~W~~~~~~p~~r~~-~~~~~~--~~~l~v~ 702 (748)
...|.+..+.....- ++.+|+.+... .+.|-++|..+. .|+.+..++..-.+ ..+... +..||+-
T Consensus 363 ~~g~~ph~g~g~~~~~p~~g~~~~s~~~~----d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~ 438 (543)
T 1nir_A 363 DVGKTPHPGRGANFVHPKYGPVWSTSHLG----DGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVD 438 (543)
T ss_dssp ECSSSBCCTTCEEEEETTTEEEEEEEBSS----SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEEC
T ss_pred ccCCCCCCCCCcccCCCCCccEEEeccCC----CceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEe
Confidence 223333222222211 37788877432 247888887762 37777665543222 222222 3455553
Q ss_pred eCCCCC-CCCCeEEEEeCCCCc
Q psy10286 703 GGYDGV-SNLPTVEVYDPSTDS 723 (748)
Q Consensus 703 GG~~~~-~~~~~v~~yd~~~~~ 723 (748)
.-.+.+ ....+|.+||..+.+
T Consensus 439 ~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 439 TTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp CTTCSSHHHHTCEEEEETTCTT
T ss_pred cCCCCCcccCceEEEEECCCCC
Confidence 211111 013579999998765
No 190
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.05 E-value=0.37 Score=48.27 Aligned_cols=206 Identities=13% Similarity=0.093 Sum_probs=108.0
Q ss_pred ccceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC----Cccee
Q psy10286 475 SLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF----KRSAV 549 (748)
Q Consensus 475 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~----~r~~~ 549 (748)
....+++||+.++....... +. .-.+++.. ++.+|+..+ ..+.+||+.+++++.+...+. .+...
T Consensus 33 ~~~~i~~~d~~~~~~~~~~~-~~--~~~~i~~~~dG~l~v~~~-------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~d 102 (297)
T 3g4e_A 33 PAKKVCRWDSFTKQVQRVTM-DA--PVSSVALRQSGGYVATIG-------TKFCALNWKEQSAVVLATVDNDKKNNRFND 102 (297)
T ss_dssp TTTEEEEEETTTCCEEEEEC-SS--CEEEEEEBTTSSEEEEET-------TEEEEEETTTTEEEEEEECCTTCSSEEEEE
T ss_pred CCCEEEEEECCCCcEEEEeC-CC--ceEEEEECCCCCEEEEEC-------CeEEEEECCCCcEEEEEecCCCCCCCCCCC
Confidence 34678999998876544321 11 11223333 666666431 479999999998877654321 22222
Q ss_pred EEEEECCEEEEEeCCCC------CCCCceEEEEeCCCCeEEEc-cCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeE
Q psy10286 550 GAAALNDKLYVCGGYDG------VSSLNTVECYEPDKDQWRIV-KSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSV 620 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~~------~~~~~~~~~yd~~~~~W~~~-~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 620 (748)
.++.-+|++|+..-... ......++++|+.. +...+ ..+..+ .+.+.. +..+|+.... .+.+
T Consensus 103 i~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~p---ngi~~spdg~~lyv~~~~-----~~~i 173 (297)
T 3g4e_A 103 GKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDIS---NGLDWSLDHKIFYYIDSL-----SYSV 173 (297)
T ss_dssp EEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBE---EEEEECTTSCEEEEEEGG-----GTEE
T ss_pred EEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccc---cceEEcCCCCEEEEecCC-----CCcE
Confidence 22222778887431111 12335789999864 33322 222111 233333 3468887654 3568
Q ss_pred EEEEC--CCCcEEE---ccCCCC-CCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEE
Q psy10286 621 ERYDP--KTDEWTS---VKPMLT-KRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALV 693 (748)
Q Consensus 621 ~~yd~--~~~~W~~---~~~~p~-~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 693 (748)
++||. .+..... +..++. ...-.+++.- +|.||+....+ ..|.+||+++.+....-.+|..+ ..++
T Consensus 174 ~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-----~~v~~~d~~tG~~~~~i~~p~~~--~t~~ 246 (297)
T 3g4e_A 174 DAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-----GRVIRLDPVTGKRLQTVKLPVDK--TTSC 246 (297)
T ss_dssp EEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-----TEEEEECTTTCCEEEEEECSSSB--EEEE
T ss_pred EEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-----CEEEEEcCCCceEEEEEECCCCC--ceEE
Confidence 88875 4554432 111221 1112233332 67888875321 46999999977655433344322 2333
Q ss_pred EEC----CEEEEEeCCC
Q psy10286 694 ANM----GKLWAIGGYD 706 (748)
Q Consensus 694 ~~~----~~l~v~GG~~ 706 (748)
..+ +.|||.....
T Consensus 247 ~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 247 CFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEESGGGCEEEEEEBCT
T ss_pred EEeCCCCCEEEEEcCCc
Confidence 332 5899987544
No 191
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.01 E-value=0.39 Score=48.06 Aligned_cols=195 Identities=13% Similarity=0.060 Sum_probs=104.0
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
++.+|+++.. ...+++||+.+++...... +. .-.+.+.. +|++|+..+ ..+.+||+.+++++.+
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~~--~~~~i~~~~dG~l~v~~~-------~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTM-DA--PVSSVALRQSGGYVATIG-------TKFCALNWKEQSAVVL 88 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEEC-SS--CEEEEEEBTTSSEEEEET-------TEEEEEETTTTEEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeC-CC--ceEEEEECCCCCEEEEEC-------CeEEEEECCCCcEEEE
Confidence 4678887642 2578999999876544321 21 12233333 677776532 4789999999998877
Q ss_pred cCCCC--C--CcceEEEEECCEEEEEccCCCC------cccCeEEEEECCCCcEEEcc-CCCCCCcceeEEEE-C-CEEE
Q psy10286 587 KSMQK--H--RSAGGVIAFDSYVYALGGHDGL------SIFDSVERYDPKTDEWTSVK-PMLTKRCRLGVAAL-N-NKIY 653 (748)
Q Consensus 587 ~~~~~--~--r~~~~~~~~~~~iyv~GG~~~~------~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~-~~i~ 653 (748)
...+. + +....++.-+|++|+..-.... .....++++|+.. +...+. .+. ...+.+.. + +.+|
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~---~pngi~~spdg~~ly 164 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVD---ISNGLDWSLDHKIFY 164 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEES---BEEEEEECTTSCEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccc---cccceEEcCCCCEEE
Confidence 54432 1 2222222236788774311110 1234789999863 333321 111 11233333 3 4688
Q ss_pred EEeccCCCccccEEEEEeC--CCCcEEE---ccCCCCC-CcceEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCCCCceEe
Q psy10286 654 VCGGYDGAIFLQSVEMYDP--ITDEWKM---IASMNVM-RSRVALVA-NMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~--~~~~W~~---~~~~p~~-r~~~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (748)
+.... .+.|++||. .+..... +..++.. ..-.+++. -+|.|||..... ..|.+||+++++...
T Consensus 165 v~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-----~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 165 YIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-----GRVIRLDPVTGKRLQ 234 (297)
T ss_dssp EEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-----TEEEEECTTTCCEEE
T ss_pred EecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-----CEEEEEcCCCceEEE
Confidence 87643 357888875 4554421 1222211 11123333 267888874311 369999999777654
Q ss_pred cCCCC
Q psy10286 727 VAPMC 731 (748)
Q Consensus 727 ~~~~~ 731 (748)
.-.+|
T Consensus 235 ~i~~p 239 (297)
T 3g4e_A 235 TVKLP 239 (297)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 43444
No 192
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.00 E-value=1.1 Score=50.92 Aligned_cols=241 Identities=14% Similarity=0.095 Sum_probs=125.8
Q ss_pred CCccceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCCCC--------CCCCeEEEEECCCCeE--EEccCC
Q psy10286 473 GDSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGS--------ERLSTVEEFDPVRRVW--NKVSPM 542 (748)
Q Consensus 473 g~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~--------~~~~~v~~yd~~t~~W--~~~~~~ 542 (748)
|.....++.+|..+++..... .+..+....+-. +++-++++..... .....+++++..+..= ..+...
T Consensus 151 G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~ 228 (693)
T 3iuj_A 151 GSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA 228 (693)
T ss_dssp SCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESC
T ss_pred CCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEec
Confidence 333467899999999876541 221211111222 5543333332211 3456789988877542 122222
Q ss_pred CC--CcceeEEEE-ECCEEEEE-eCCCCCCCCceEEEEeCCCC--eEEEccCCCCCCcceEEEEECCEEEEEccCCCCcc
Q psy10286 543 CF--KRSAVGAAA-LNDKLYVC-GGYDGVSSLNTVECYEPDKD--QWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSI 616 (748)
Q Consensus 543 ~~--~r~~~~~~~-~~~~iyv~-GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~ 616 (748)
+. +....+... -+|+..++ .+.+. ..+.++.+|..+. .|..+..-..... ......++.+|+....++ .
T Consensus 229 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~--~ 303 (693)
T 3iuj_A 229 IPAQHHRYVGATVTEDDRFLLISAANST--SGNRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGSTLYLLTNRDA--P 303 (693)
T ss_dssp SGGGCCSEEEEEECTTSCEEEEEEESSS--SCCEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETTEEEEEECTTC--T
T ss_pred CCCCCeEEEEEEEcCCCCEEEEEEccCC--CCcEEEEEECCCCCCceEEEeCCCCceE-EEEeccCCEEEEEECCCC--C
Confidence 22 222223222 25553333 32221 2268999998765 6776654222211 123445889999876543 2
Q ss_pred cCeEEEEECCCC---cEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEE
Q psy10286 617 FDSVERYDPKTD---EWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALV 693 (748)
Q Consensus 617 ~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 693 (748)
...++.+|+.+. .|+.+.+-.... . +....++.|++....++ ...++++|........+. +|.........
T Consensus 304 ~~~l~~~d~~~~~~~~~~~l~~~~~~~-~-~~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l~-~p~~~~~~~~~ 377 (693)
T 3iuj_A 304 NRRLVTVDAANPGPAHWRDLIPERQQV-L-TVHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREVA-LPGLGSVSGFN 377 (693)
T ss_dssp TCEEEEEETTSCCGGGCEEEECCCSSC-E-EEEEETTEEEEEEEETT---EEEEEEECTTSCEEEEEC-CSSSSEEEECC
T ss_pred CCEEEEEeCCCCCccccEEEecCCCCE-E-EEEEECCEEEEEEEECC---eeEEEEEECCCCeeEEee-cCCCceEEeee
Confidence 457999998763 488764332222 2 45555777766554333 357899998876555553 22221111111
Q ss_pred E--ECCEEEEE-eCCCCCCCCCeEEEEeCCCCceEecCC
Q psy10286 694 A--NMGKLWAI-GGYDGVSNLPTVEVYDPSTDSWAFVAP 729 (748)
Q Consensus 694 ~--~~~~l~v~-GG~~~~~~~~~v~~yd~~~~~W~~~~~ 729 (748)
. -++.+++. .+.. .-.+++.||+.+++++.+..
T Consensus 378 ~~~d~~~l~~~~ss~~---tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 378 GKHDDPALYFGFENYA---QPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp CCTTCSCEEEEEECSS---SCCEEEEECTTTCCEEEEEC
T ss_pred cCCCCCEEEEEecCCC---CCCEEEEEECCCCeEEEEEe
Confidence 1 12344443 2222 23579999999988776644
No 193
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=95.99 E-value=0.0037 Score=56.55 Aligned_cols=87 Identities=8% Similarity=0.140 Sum_probs=61.4
Q ss_pred hcchhHHHHHHHHhhhcccCCccc-----ch--hhhhhhhHHHHHHHhhccee--------------------------E
Q psy10286 189 LQMQKVADACADFLKKRFHPNNVL-----DY--YVLFSCRAMEALINFAYSGR--------------------------V 235 (748)
Q Consensus 189 l~i~~l~~~c~~~l~~~l~~~ncl-----~i--~~~~~~~~~~~ll~~~y~~~--------------------------~ 235 (748)
|.++..+..|+.++...+....|- .. +.-.+...++.+++|+|+.. +
T Consensus 13 f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~ 92 (159)
T 2ast_A 13 FEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL 92 (159)
T ss_dssp EEEEHHHHHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHT
T ss_pred EEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHH
Confidence 445555556666666555431211 01 11245667888999999876 6
Q ss_pred EEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCCCCCcc
Q psy10286 236 TIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNVL 275 (748)
Q Consensus 236 ~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~~~n~~ 275 (748)
.+..+++.+|+.+|++|++..|.+.|++++...+.-.+.-
T Consensus 93 ~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~e 132 (159)
T 2ast_A 93 KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE 132 (159)
T ss_dssp CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHH
T ss_pred cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHH
Confidence 7788899999999999999999999999998766655543
No 194
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.98 E-value=1.4 Score=50.01 Aligned_cols=117 Identities=21% Similarity=0.280 Sum_probs=72.4
Q ss_pred EEECCEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCCCC--------cceeEEEEECCEEEEEeCCCCCCCCceEE
Q psy10286 505 AVMKNRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMCFK--------RSAVGAAALNDKLYVCGGYDGVSSLNTVE 574 (748)
Q Consensus 505 ~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 574 (748)
++.++.||+.+.. ..++.+|..|.+ |+.-...+.. ....+.++.+++||+.+. -..+.
T Consensus 67 ~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l~ 134 (689)
T 1yiq_A 67 IVVDGVMYTTGPF------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGRLE 134 (689)
T ss_dssp EEETTEEEEECGG------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEEE
T ss_pred EEECCEEEEEcCC------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCEEE
Confidence 4679999997652 468999988764 8865433211 111234567889987542 24789
Q ss_pred EEeCCCCe--EEEccC-CCC--CCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCc--EEEc
Q psy10286 575 CYEPDKDQ--WRIVKS-MQK--HRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDE--WTSV 633 (748)
Q Consensus 575 ~yd~~~~~--W~~~~~-~~~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~ 633 (748)
.+|..+.+ |+.... -+. .....+.++.++.+|+-.+.........++.||+.+.+ |+.-
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 135 AIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 99998775 887643 111 11223445678998874332222234579999998875 8754
No 195
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.98 E-value=1.4 Score=45.99 Aligned_cols=233 Identities=11% Similarity=0.075 Sum_probs=126.1
Q ss_pred EEEEeCCC--CceEEccCCCcccceeEEEEE---CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCC---CCC--c--
Q psy10286 479 VEVFDPLV--GRWQMAEAMSMLRSRVGVAVM---KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPM---CFK--R-- 546 (748)
Q Consensus 479 ~~~yd~~~--~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~---~~~--r-- 546 (748)
+++++... .+|+...+......-++++.. .+.||+.+.... .-..+++.+....+|+.+... +.. +
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~ 110 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPEGET 110 (394)
T ss_dssp EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC----
T ss_pred eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCcccccc
Confidence 56666544 689876422222223444443 467888654211 112588888788899988532 211 1
Q ss_pred -----ceeEEEEE----CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCC---CC--------------CCcceEEEE
Q psy10286 547 -----SAVGAAAL----NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSM---QK--------------HRSAGGVIA 600 (748)
Q Consensus 547 -----~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---~~--------------~r~~~~~~~ 600 (748)
.-.+++.. .+.+|+.+. ...+++.+-...+|+.+... |. ....++++.
T Consensus 111 ~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~ 184 (394)
T 3b7f_A 111 GRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILV 184 (394)
T ss_dssp CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEE
T ss_pred cccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEE
Confidence 11223332 467887542 13688888888899988532 21 111234443
Q ss_pred E---CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCC------CCC-----CcceeEEEEC---CEEEEEeccCCCcc
Q psy10286 601 F---DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPM------LTK-----RCRLGVAALN---NKIYVCGGYDGAIF 663 (748)
Q Consensus 601 ~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~------p~~-----r~~~~~~~~~---~~i~v~GG~~~~~~ 663 (748)
. .+.||+..+. ..+++.+....+|+.+... |.+ ...+.++... +.||+..+
T Consensus 185 d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~------ 252 (394)
T 3b7f_A 185 DPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH------ 252 (394)
T ss_dssp CTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET------
T ss_pred CCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC------
Confidence 3 3578876432 2588888888899988531 211 1223444332 66776432
Q ss_pred ccEEEEEeCCCCcEEEccC-CCCC--CcceEEEEE---CCEEEEEeCCCC-------CCCCCeEEEEeCCCCceEecCC-
Q psy10286 664 LQSVEMYDPITDEWKMIAS-MNVM--RSRVALVAN---MGKLWAIGGYDG-------VSNLPTVEVYDPSTDSWAFVAP- 729 (748)
Q Consensus 664 ~~~v~~yd~~~~~W~~~~~-~p~~--r~~~~~~~~---~~~l~v~GG~~~-------~~~~~~v~~yd~~~~~W~~~~~- 729 (748)
..+++.+....+|+.+.. +|.. .....++.. .+.||+.....+ ......++.-.-...+|+.+..
T Consensus 253 -~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~g 331 (394)
T 3b7f_A 253 -CGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRG 331 (394)
T ss_dssp -TEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBT
T ss_pred -CeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCC
Confidence 458888888899999854 4432 233333332 467887642111 0111234443333468998753
Q ss_pred CCC
Q psy10286 730 MCA 732 (748)
Q Consensus 730 ~~~ 732 (748)
+|.
T Consensus 332 lp~ 334 (394)
T 3b7f_A 332 LPT 334 (394)
T ss_dssp SCC
T ss_pred CCC
Confidence 554
No 196
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.97 E-value=1.5 Score=43.88 Aligned_cols=204 Identities=13% Similarity=0.051 Sum_probs=109.6
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 554 (748)
...++++|+... .......+ ..-++++.. ++++||...... ...+++||+.+.+.+.+...+..+...+.+..
T Consensus 52 ~~~I~~~d~~g~-~~~~~~~~--~~p~gia~~~dG~l~vad~~~~---~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~ 125 (306)
T 2p4o_A 52 VGEIVSITPDGN-QQIHATVE--GKVSGLAFTSNGDLVATGWNAD---SIPVVSLVKSDGTVETLLTLPDAIFLNGITPL 125 (306)
T ss_dssp TTEEEEECTTCC-EEEEEECS--SEEEEEEECTTSCEEEEEECTT---SCEEEEEECTTSCEEEEEECTTCSCEEEEEES
T ss_pred CCeEEEECCCCc-eEEEEeCC--CCceeEEEcCCCcEEEEeccCC---cceEEEEcCCCCeEEEEEeCCCccccCccccc
Confidence 356888988764 32222222 122344443 677888764211 13588999988888776665555555555544
Q ss_pred -CCEEEEEeCCCCCCCCceEEEEeCCCCe---EEEccC----CCCC--CcceEEEEECCEEEEEccCCCCcccCeEEEEE
Q psy10286 555 -NDKLYVCGGYDGVSSLNTVECYEPDKDQ---WRIVKS----MQKH--RSAGGVIAFDSYVYALGGHDGLSIFDSVERYD 624 (748)
Q Consensus 555 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~---W~~~~~----~~~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 624 (748)
++.+|+.-. ....++++|+.+.. |...+. .+.. ....++..-++.+|+.--. .+.+++||
T Consensus 126 ~~~~~~v~d~-----~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~-----~~~I~~~~ 195 (306)
T 2p4o_A 126 SDTQYLTADS-----YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTE-----KMLLLRIP 195 (306)
T ss_dssp SSSEEEEEET-----TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETT-----TTEEEEEE
T ss_pred CCCcEEEEEC-----CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCC-----CCEEEEEE
Confidence 567787642 12489999998653 322111 1111 1112233345688887543 35799999
Q ss_pred CCC-CcE---EEccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEEC---
Q psy10286 625 PKT-DEW---TSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANM--- 696 (748)
Q Consensus 625 ~~~-~~W---~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--- 696 (748)
+.. .+. ....... .-.++++- +|.+|+.-.. .+.|.+||+. .+...+...+.+......+.++
T Consensus 196 ~~~~g~~~~~~~~~~~~---~P~gi~vd~dG~l~va~~~-----~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~ 266 (306)
T 2p4o_A 196 VDSTDKPGEPEIFVEQT---NIDDFAFDVEGNLYGATHI-----YNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTE 266 (306)
T ss_dssp BCTTSCBCCCEEEEESC---CCSSEEEBTTCCEEEECBT-----TCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCST
T ss_pred eCCCCCCCccEEEeccC---CCCCeEECCCCCEEEEeCC-----CCeEEEECCC-CCEEEEeecccccCCceEEEEeccc
Confidence 865 221 1111111 11233333 6788887532 2579999986 4444443333332233333332
Q ss_pred ---CEEEEEeC
Q psy10286 697 ---GKLWAIGG 704 (748)
Q Consensus 697 ---~~l~v~GG 704 (748)
+.|||...
T Consensus 267 ~d~~~LyVt~~ 277 (306)
T 2p4o_A 267 GDCTAIYVVTN 277 (306)
T ss_dssp TTTTEEEEEEC
T ss_pred CCCCEEEEECC
Confidence 68998754
No 197
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.94 E-value=0.35 Score=48.82 Aligned_cols=141 Identities=16% Similarity=0.077 Sum_probs=73.6
Q ss_pred ceEEEEeCCCCceEEccCCCccc-ceeEEEEE-CC-EEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCC----ccee
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLR-SRVGVAVM-KN-RLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFK----RSAV 549 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r-~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~----r~~~ 549 (748)
..+..+|+.+++....-.++... .-+.++.. ++ .+|+.++. ...++++|+.+.+-...-+.+.+ ..-+
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcCCccccccccc
Confidence 57889999887654332222210 11223332 44 67877653 24799999988765432222110 0112
Q ss_pred EEEEE-CC-EEEEEeCCC---CCC---CCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CC-EEEEEccCCCCcccCe
Q psy10286 550 GAAAL-ND-KLYVCGGYD---GVS---SLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DS-YVYALGGHDGLSIFDS 619 (748)
Q Consensus 550 ~~~~~-~~-~iyv~GG~~---~~~---~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~ 619 (748)
.++.. ++ .+|+.++.. ... .-..+..||+.+.+....-+.+ ..-..++.. ++ .+|+.+ ..
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~--------~~ 155 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLG--------RD 155 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEES--------SS
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEeC--------Ce
Confidence 23333 44 677764210 000 1368999999887754332222 112233332 44 466662 35
Q ss_pred EEEEECCCCcEEE
Q psy10286 620 VERYDPKTDEWTS 632 (748)
Q Consensus 620 ~~~yd~~~~~W~~ 632 (748)
++.+|+.+.+-..
T Consensus 156 i~~~d~~~~~~~~ 168 (337)
T 1pby_B 156 LHVMDPEAGTLVE 168 (337)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCCCcEee
Confidence 9999998876543
No 198
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.93 E-value=1.8 Score=49.03 Aligned_cols=118 Identities=17% Similarity=0.209 Sum_probs=72.8
Q ss_pred EEEECCEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCCCC--------cceeEEEEECCEEEEEeCCCCCCCCceE
Q psy10286 504 VAVMKNRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMCFK--------RSAVGAAALNDKLYVCGGYDGVSSLNTV 573 (748)
Q Consensus 504 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 573 (748)
-++.++.||+.... ..++.+|..+.+ |+.-...+.. ....+.++.+++||+... -..+
T Consensus 62 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l 129 (668)
T 1kv9_A 62 PLFHDGVIYTSMSW------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DGRL 129 (668)
T ss_dssp CEEETTEEEEEEGG------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TSEE
T ss_pred CEEECCEEEEECCC------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CCEE
Confidence 35679999997652 468999988764 8875433211 011234556889987542 1478
Q ss_pred EEEeCCCCe--EEEccCCCCC--CcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCc--EEEc
Q psy10286 574 ECYEPDKDQ--WRIVKSMQKH--RSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDE--WTSV 633 (748)
Q Consensus 574 ~~yd~~~~~--W~~~~~~~~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~ 633 (748)
+.+|..+.+ |+.-..-+.. ....+.++.++.+|+-.+.........++.||+.+.+ |+.-
T Consensus 130 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 999988775 8875432211 2223445678888875432222234579999998765 8763
No 199
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.93 E-value=1.4 Score=43.05 Aligned_cols=219 Identities=11% Similarity=0.038 Sum_probs=119.2
Q ss_pred eEEEEeCCCCceEEccC---CCcc-cceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEE
Q psy10286 478 TVEVFDPLVGRWQMAEA---MSML-RSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGA 551 (748)
Q Consensus 478 ~~~~yd~~~~~W~~~~~---~~~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~ 551 (748)
.++++|........... +..+ ..-+++++. ++.||+.-.. ...+.+||+....-..+.+... ..-+++
T Consensus 11 ~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~-~~p~~i 84 (267)
T 1npe_A 11 KIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQDL-GSPEGI 84 (267)
T ss_dssp EEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECTTC-CCEEEE
T ss_pred eEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEECCC-CCccEE
Confidence 56667665543321111 1111 223455554 5789987542 3579999988764333221111 123445
Q ss_pred EEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCC
Q psy10286 552 AAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKT 627 (748)
Q Consensus 552 ~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 627 (748)
+.. ++.||+.-.. .+.+.++|+....-+.+.+....+ -..+++. ++.||+..... ....++++++..
T Consensus 85 a~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~-P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg 155 (267)
T 1npe_A 85 ALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRVLFDTGLVN-PRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDG 155 (267)
T ss_dssp EEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSS-EEEEEEETTTTEEEEEECCS---SSCEEEEEETTS
T ss_pred EEEecCCeEEEEECC-----CCEEEEEEcCCCCEEEEEECCCCC-ccEEEEeeCCCEEEEEECCC---CCcEEEEEecCC
Confidence 543 5799998642 357889998754433332211111 1233443 68999986431 124788898865
Q ss_pred CcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEc-cCCCCCCcceEEEEECCEEEEEeC
Q psy10286 628 DEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMI-ASMNVMRSRVALVANMGKLWAIGG 704 (748)
Q Consensus 628 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~l~v~GG 704 (748)
..-+.+..... ..-.+++.- +++||+.-.. .+.|+++|+....-..+ .....| .+++..++.||+...
T Consensus 156 ~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~~ 226 (267)
T 1npe_A 156 TNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTDW 226 (267)
T ss_dssp CCCEEEECTTC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEET
T ss_pred CCcEEEEECCC-CCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEEC
Confidence 44333321111 222344443 5789988643 36899999876432222 222222 455566899999753
Q ss_pred CCCCCCCCeEEEEeCCCCceE
Q psy10286 705 YDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~~W~ 725 (748)
. .+.|.++|+.+++-.
T Consensus 227 ~-----~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 227 K-----TNSVIAMDLAISKEM 242 (267)
T ss_dssp T-----TTEEEEEETTTTEEE
T ss_pred C-----CCeEEEEeCCCCCce
Confidence 2 247999999887654
No 200
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.87 E-value=1.3 Score=46.97 Aligned_cols=200 Identities=15% Similarity=0.236 Sum_probs=108.4
Q ss_pred eEEEEeCCCCceEEc--cCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEE------------EccCC-
Q psy10286 478 TVEVFDPLVGRWQMA--EAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWN------------KVSPM- 542 (748)
Q Consensus 478 ~~~~yd~~~~~W~~~--~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~------------~~~~~- 542 (748)
..|.||..+++.... +.+| .. -++....+++|+|-| +..|+||+.+++=. ..+..
T Consensus 168 ~yw~yd~~~~~~~~~~w~gi~--~i-DAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~gyPk~is~~w~~c~~~g 237 (460)
T 1qhu_A 168 RKWFWDLTTGTKKERSWPAVG--NC-TSALRWLGRYYCFQG-------NQFLRFNPVSGEVPPGYPLDVRDYFLSCPGRG 237 (460)
T ss_dssp EEEEEETTTTEEEEECCTTSC--CC-SEEEEETTEEEEEET-------TEEEEECTTTCCCCTTCCEEHHHHTSCCTTCC
T ss_pred cEEEEecccceeecccCCCCC--cc-chheeeCCceEEEEC-------CEEEEEcCccCcccCCCCcchhhcccCCCCCC
Confidence 467777776544321 2222 22 344445789999988 57888988765311 11110
Q ss_pred -----------------CCCccee-EEEE-ECCEEEEEeCCCCCCCCceEEEEeCCCCeEE--Ec----cCCCCCCcceE
Q psy10286 543 -----------------CFKRSAV-GAAA-LNDKLYVCGGYDGVSSLNTVECYEPDKDQWR--IV----KSMQKHRSAGG 597 (748)
Q Consensus 543 -----------------~~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~--~~----~~~~~~r~~~~ 597 (748)
..+.... ++.. .+|++|.|-| +..|++|...+.+. .+ +.+|. .--+
T Consensus 238 ~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~~Is~~WpglP~--~IDA 308 (460)
T 1qhu_A 238 HRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS--TVDA 308 (460)
T ss_dssp SCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCEEGGGTCTTSCS--SCSE
T ss_pred CccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCccchhhhccCCCC--CCcE
Confidence 0011122 3333 4789999988 45677766543321 11 12332 2334
Q ss_pred EEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEcc----------CCCCC--CcceeEEEE---CCEEEEEeccCCCc
Q psy10286 598 VIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVK----------PMLTK--RCRLGVAAL---NNKIYVCGGYDGAI 662 (748)
Q Consensus 598 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~----------~~p~~--r~~~~~~~~---~~~i~v~GG~~~~~ 662 (748)
+...++++|+|=|. .+|+|+..++ .+.+. .+|.. ....-++.. ++++|++-|
T Consensus 309 Af~~~~~~yfFkG~-------~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~~~~~~ktyfFkG----- 375 (460)
T 1qhu_A 309 AFSWEDKLYLIQDT-------KVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG----- 375 (460)
T ss_dssp EEEETTEEEEEETT-------EEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-----
T ss_pred EEEECCeEEEEeCC-------EEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEEeCCCCEEEEEEC-----
Confidence 44568999999874 7899986531 22222 12222 122334433 589999988
Q ss_pred cccEEEEEeCCCC---cEEEccCCCCCCcceEEEE------------ECCEEEEEeCCCCCCCCCeEEEEeCC
Q psy10286 663 FLQSVEMYDPITD---EWKMIASMNVMRSRVALVA------------NMGKLWAIGGYDGVSNLPTVEVYDPS 720 (748)
Q Consensus 663 ~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~------------~~~~l~v~GG~~~~~~~~~v~~yd~~ 720 (748)
+..|.||.... .|...+.+|. .- .++.. .++.+|+|-| +..+.||..
T Consensus 376 --~~ywryd~~~~Pr~i~~~~~gi~~-~v-dAaf~~~~~~~~~~~~~~~~~~yfF~g-------~~y~~~~~~ 437 (460)
T 1qhu_A 376 --RRLWWLDLKSGAQATWTELPWPHE-KV-DGALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRHV 437 (460)
T ss_dssp --TEEEEEEGGGGGGCCCEEECCSCS-CC-SEEEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESSH
T ss_pred --CEEEEEECCCCccchhhhCCCCCC-Cc-CEEEecccccCcccccccCCeEEEEEC-------CEEEEEcCh
Confidence 68899997632 1222222221 12 23333 4678999977 467778764
No 201
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.82 E-value=0.42 Score=50.11 Aligned_cols=184 Identities=10% Similarity=0.084 Sum_probs=91.1
Q ss_pred CCccceEEEEeCCCCc------eE-EccCCC-cccceeEEEEE-C-CEEEEEccCCCCCCCCeEEEEECCCCeEEEccCC
Q psy10286 473 GDSLSTVEVFDPLVGR------WQ-MAEAMS-MLRSRVGVAVM-K-NRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPM 542 (748)
Q Consensus 473 g~~~~~~~~yd~~~~~------W~-~~~~~~-~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~ 542 (748)
+..-..+..||..+.+ -. .+.... ....-.+++.. + +.+++.|+.+ ..+..||..+.+....-..
T Consensus 132 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~ 206 (416)
T 2pm9_A 132 GGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-----NFASIWDLKAKKEVIHLSY 206 (416)
T ss_dssp ECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEETTTTEEEEEECC
T ss_pred EcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEECCCCCcceEEec
Confidence 3334568888888765 11 111111 11112233333 3 5778887754 3588999988765443332
Q ss_pred CC-----CcceeEEEEE-CC-EEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCC-CCCcc-eEEEEE--CCEEEEEccC
Q psy10286 543 CF-----KRSAVGAAAL-ND-KLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQ-KHRSA-GGVIAF--DSYVYALGGH 611 (748)
Q Consensus 543 ~~-----~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~-~~~~~~--~~~iyv~GG~ 611 (748)
+. ...-.+++.. ++ .+++.|+.++.. ..+..||..+..- .+..+. ..... .+++.. ++.+++.|+.
T Consensus 207 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~--~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 283 (416)
T 2pm9_A 207 TSPNSGIKQQLSVVEWHPKNSTRVATATGSDND--PSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGR 283 (416)
T ss_dssp CCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS--CCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEES
T ss_pred cccccccCCceEEEEECCCCCCEEEEEECCCCC--ceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeC
Confidence 21 1222233333 33 577777755321 2577888876431 111121 11111 222222 5777788876
Q ss_pred CCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CC-EEEEEeccCCCccccEEEEEeCCCC
Q psy10286 612 DGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NN-KIYVCGGYDGAIFLQSVEMYDPITD 675 (748)
Q Consensus 612 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 675 (748)
++ .+..||..+.+-...-...... -.+++.. ++ .+++.|+.+ ..+.+||..+.
T Consensus 284 dg-----~v~~wd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~l~s~~~d-----~~i~iw~~~~~ 338 (416)
T 2pm9_A 284 DN-----TVLLWNPESAEQLSQFPARGNW-CFKTKFAPEAPDLFACASFD-----NKIEVQTLQNL 338 (416)
T ss_dssp SS-----EEEEECSSSCCEEEEEECSSSC-CCCEEECTTCTTEEEECCSS-----SEEEEEESCCC
T ss_pred CC-----CEEEeeCCCCccceeecCCCCc-eEEEEECCCCCCEEEEEecC-----CcEEEEEccCC
Confidence 43 6888998776533221111111 1122222 34 677887754 35677776543
No 202
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.82 E-value=0.62 Score=49.23 Aligned_cols=254 Identities=15% Similarity=0.145 Sum_probs=121.0
Q ss_pred ceEeecCCCCceeeccc---c--cccceEEecccccccCCCccceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEE
Q psy10286 439 TVEVFDPLVGRWQMAEE---E--TLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYA 513 (748)
Q Consensus 439 ~~~~y~~~~~~W~~~~~---~--~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv 513 (748)
++..||..+++...+-. . .+....+..++.....|..-..+..+|..+++-...- ........+...++.+.+
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~--~~h~~~v~~~s~~~~~l~ 203 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM--TSHSARVGSLSWNSYILS 203 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEETTEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE--eCCCCceEEEeeCCCEEE
Confidence 68899998887654322 1 1222233444444444444467888998887543322 212222334445677777
Q ss_pred EccCCCCCCCCeEEEEECCCCeEEEcc-CCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCe--EEEccCCC
Q psy10286 514 FGGYNGSERLSTVEEFDPVRRVWNKVS-PMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQ--WRIVKSMQ 590 (748)
Q Consensus 514 ~GG~~~~~~~~~v~~yd~~t~~W~~~~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~ 590 (748)
.|+.+ ..+..+|..+....... .-...........-++...+.||.+ +.+..+|..+.. +..+....
T Consensus 204 sgs~d-----~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D-----~~v~i~~~~~~~~~~~~~~~~~ 273 (420)
T 4gga_A 204 SGSRS-----GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFT 273 (420)
T ss_dssp EEETT-----SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCCSSCSCCSEEEC
T ss_pred EEeCC-----CceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecc-----ccceEEeeccccccceeeeeec
Confidence 78754 35677776654322111 0011111111111255666666654 345666665432 11111111
Q ss_pred CCCcc-eEEEEE--CCEEEEE-ccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccc
Q psy10286 591 KHRSA-GGVIAF--DSYVYAL-GGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFL 664 (748)
Q Consensus 591 ~~r~~-~~~~~~--~~~iyv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~ 664 (748)
..... .+.+.. +..+++. ||..+ ..+..||..+.+-...-... ....+++.. ++.+++.+|...
T Consensus 274 ~~~~~V~~~~~~p~~~~~la~~~gs~D----~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv~~sg~~d---- 343 (420)
T 4gga_A 274 QHQGAVKAVAWCPWQSNVLATGGGTSD----RHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISGHGFAQ---- 343 (420)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEECTTT----CEEEEEETTTTEEEEEEECS--SCEEEEEEETTTTEEEEEECTTT----
T ss_pred ccCCceeeeeeCCCcccEEEEEeecCC----CEEEEEeCCccccceeeccc--cceeeeeecCCCCeEEEEEecCC----
Confidence 11111 112221 3444444 44322 35888998887644332211 111222222 455655555432
Q ss_pred cEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 665 QSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 665 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
+.|.+||..+.+ .+..+.........+.+ +++.++.||.++ .|.++|...
T Consensus 344 ~~I~iwd~~~~~--~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~-----tvriWdv~~ 395 (420)
T 4gga_A 344 NQLVIWKYPTMA--KVAELKGHTSRVLSLTMSPDGATVASAAADE-----TLRLWRCFE 395 (420)
T ss_dssp CCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSCEEEEETTT-----EEEEECCSC
T ss_pred CEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEecCC-----eEEEEECCC
Confidence 468889987653 33333221222222223 677888888553 577777643
No 203
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.82 E-value=1.8 Score=43.41 Aligned_cols=208 Identities=11% Similarity=0.056 Sum_probs=112.0
Q ss_pred ceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCC
Q psy10286 488 RWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYD 565 (748)
Q Consensus 488 ~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~ 565 (748)
..+.+..+|......++++. ++.||+.--. ...+++||+.... ......+ ..-++++.. +|++|+.....
T Consensus 21 ~~~~~~~~p~~~~pegia~~~~g~lyv~d~~-----~~~I~~~d~~g~~-~~~~~~~--~~p~gia~~~dG~l~vad~~~ 92 (306)
T 2p4o_A 21 PAKIITSFPVNTFLENLASAPDGTIFVTNHE-----VGEIVSITPDGNQ-QIHATVE--GKVSGLAFTSNGDLVATGWNA 92 (306)
T ss_dssp CEEEEEEECTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTTCCE-EEEEECS--SEEEEEEECTTSCEEEEEECT
T ss_pred CceEeEeCCCCCCcceEEECCCCCEEEEeCC-----CCeEEEECCCCce-EEEEeCC--CCceeEEEcCCCcEEEEeccC
Confidence 34444444444444455543 6779987532 2468999988753 2222222 233444443 67898875321
Q ss_pred CCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCc---EEEccC----CC
Q psy10286 566 GVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDE---WTSVKP----ML 637 (748)
Q Consensus 566 ~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~---W~~~~~----~p 637 (748)
. ...++.||+.+.+.+.+...+..+.....+.. ++.+|+.... ...++++|+.+.. |..-+. .+
T Consensus 93 ~---~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~~~~v~~~~~~~~~~~~ 164 (306)
T 2p4o_A 93 D---SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY-----RGAIWLIDVVQPSGSIWLEHPMLARSNS 164 (306)
T ss_dssp T---SCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT-----TTEEEEEETTTTEEEEEEECGGGSCSST
T ss_pred C---cceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECC-----CCeEEEEeCCCCcEeEEEECCccccccc
Confidence 1 12588899888888777666554544444433 5677776432 2479999998652 211111 11
Q ss_pred CC--CcceeEEEECCEEEEEeccCCCccccEEEEEeCCC-CcE---EEccCCCCCCcceEEEE-ECCEEEEEeCCCCCCC
Q psy10286 638 TK--RCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPIT-DEW---KMIASMNVMRSRVALVA-NMGKLWAIGGYDGVSN 710 (748)
Q Consensus 638 ~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W---~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~ 710 (748)
.. ....++..-++.+|+.--. .+.|++||... .+. ..+.....+ .++++ -+|+|||.-..
T Consensus 165 ~~~~~~pngis~dg~~lyv~d~~-----~~~I~~~~~~~~g~~~~~~~~~~~~~P---~gi~vd~dG~l~va~~~----- 231 (306)
T 2p4o_A 165 ESVFPAANGLKRFGNFLYVSNTE-----KMLLLRIPVDSTDKPGEPEIFVEQTNI---DDFAFDVEGNLYGATHI----- 231 (306)
T ss_dssp TCCSCSEEEEEEETTEEEEEETT-----TTEEEEEEBCTTSCBCCCEEEEESCCC---SSEEEBTTCCEEEECBT-----
T ss_pred cCCCCcCCCcCcCCCEEEEEeCC-----CCEEEEEEeCCCCCCCccEEEeccCCC---CCeEECCCCCEEEEeCC-----
Confidence 11 1223333335678887532 36899999864 221 111111111 22233 36788887431
Q ss_pred CCeEEEEeCCCCceE
Q psy10286 711 LPTVEVYDPSTDSWA 725 (748)
Q Consensus 711 ~~~v~~yd~~~~~W~ 725 (748)
.+.|.+||+. ++..
T Consensus 232 ~~~V~~~~~~-G~~~ 245 (306)
T 2p4o_A 232 YNSVVRIAPD-RSTT 245 (306)
T ss_dssp TCCEEEECTT-CCEE
T ss_pred CCeEEEECCC-CCEE
Confidence 2468999986 4443
No 204
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.80 E-value=0.31 Score=49.66 Aligned_cols=189 Identities=20% Similarity=0.297 Sum_probs=96.2
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCC--CeEEEccCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVR--RVWNKVSPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQW 583 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t--~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 583 (748)
++..++.||.+ ..+..||... ..+..+..+......-..+.. ++.+++.||.+ ..+..||..++.|
T Consensus 118 ~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~~~~~~ 187 (330)
T 2hes_X 118 DGYYLATCSRD-----KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-----DTVRIWKDYDDDW 187 (330)
T ss_dssp TSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCCe
Confidence 56777777754 3577888743 334433322211112222222 66777888765 3577788777777
Q ss_pred EEccCCCCCCcceEEEEE--C--CEEEEEccCCCCcccCeEEEEECCC------CcEEEccCCCC--CCcceeEEEECCE
Q psy10286 584 RIVKSMQKHRSAGGVIAF--D--SYVYALGGHDGLSIFDSVERYDPKT------DEWTSVKPMLT--KRCRLGVAALNNK 651 (748)
Q Consensus 584 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~------~~W~~~~~~p~--~r~~~~~~~~~~~ 651 (748)
..+..+......-..+.+ + +..++.||.++ .+..||..+ ..|.....++. ...-.+++...+.
T Consensus 188 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~ 262 (330)
T 2hes_X 188 ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG 262 (330)
T ss_dssp EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS
T ss_pred eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC
Confidence 666544322222122222 2 44566676644 344454432 24555443332 1222223222445
Q ss_pred EEEEeccCCCccccEEEEEeCCCCcEEEccCCCCC-Cc-ceEEEEE----CCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 652 IYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVM-RS-RVALVAN----MGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 652 i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~-~~~~~~~----~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
+++.||.+ ..+.+||..+..|..+...... .. ...++.. ++++++.||.++ .|.+||.++
T Consensus 263 ~l~s~~~d-----g~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg-----~v~~W~~~~ 328 (330)
T 2hes_X 263 LIASVGAD-----GVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG-----IVNFWSLEK 328 (330)
T ss_dssp CEEEEETT-----SCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS-----EEEEEEC--
T ss_pred EEEEEeCC-----CEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC-----cEEEEEecc
Confidence 66777754 3678888888888665332211 11 2222222 467788888553 578887654
No 205
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.77 E-value=0.34 Score=50.33 Aligned_cols=243 Identities=11% Similarity=-0.062 Sum_probs=121.1
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEE--E
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAA--L 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~--~ 554 (748)
..+|.+|..+++..++...+..........-+++..+++..+ ..++.+|+.+.+-..+...+.......... -
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 134 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-----RNLMRVDLATLEENVVYQVPAEWVGYGTWVANS 134 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECCTTEEEEEEEEECT
T ss_pred ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeeeechhhcccccceeECC
Confidence 468999999998887765443222111222255433333321 479999999987666655554433222222 2
Q ss_pred CCEEEEEeC---CC--------------CCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCC-CCc
Q psy10286 555 NDKLYVCGG---YD--------------GVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHD-GLS 615 (748)
Q Consensus 555 ~~~iyv~GG---~~--------------~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~-~~~ 615 (748)
+++.++.-- .. .......++.+|+.+++-..+..-+. ...+....- +++..++.... ...
T Consensus 135 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~ 213 (388)
T 3pe7_A 135 DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDL 213 (388)
T ss_dssp TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTT
T ss_pred CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCC
Confidence 444433110 00 01133678999999887655543221 122222222 45444333322 112
Q ss_pred ccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCE-EEEEeccCCCccccEEEEEeCCCCcEEEccCCCCC------
Q psy10286 616 IFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNK-IYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVM------ 686 (748)
Q Consensus 616 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~------ 686 (748)
....++.+|+.+.....+....... ......+ +++ |+.....++ .....++.+|+.+.+-+.+...+..
T Consensus 214 ~~~~l~~~d~~~~~~~~l~~~~~~~-~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 291 (388)
T 3pe7_A 214 VDARMWLINEDGTNMRKVKTHAEGE-SCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETLENRQLTSMPACSHLMSN 291 (388)
T ss_dssp SSCSEEEEETTSCCCEESCCCCTTE-EEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTCCEEEEEEECCEEEEEEC
T ss_pred CcceEEEEeCCCCceEEeeeCCCCc-ccccceECCCCCEEEEEecCCC-CCcceEEEEecCCCceEEEEcCCCceeeeec
Confidence 2458999999887766664422111 1112223 555 544433222 1123599999999887766544320
Q ss_pred CcceEEEEECCEEEEEe----CCCCCCCCCeEEEEeCCCCceEecC
Q psy10286 687 RSRVALVANMGKLWAIG----GYDGVSNLPTVEVYDPSTDSWAFVA 728 (748)
Q Consensus 687 r~~~~~~~~~~~l~v~G----G~~~~~~~~~v~~yd~~~~~W~~~~ 728 (748)
..+.....-+..|++.. |+.. .....++++|+.++..+.+.
T Consensus 292 ~~~~~~spdg~~l~~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 292 YDGSLMVGDGSDAPVDVQDDSGYKI-ENDPFLYVFNMKNGTQHRVA 336 (388)
T ss_dssp TTSSEEEEEECCC-------------CCCCEEEEEETTTTEEEEEE
T ss_pred CCCCeEccCCCcceeEeeecccccc-CCCCEEEEEeccCCceEEec
Confidence 01112222333444321 1111 12357999999988766553
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.74 E-value=0.56 Score=46.99 Aligned_cols=216 Identities=13% Similarity=0.052 Sum_probs=109.4
Q ss_pred cceEeecCCCCceeeccc-----c-cccceE-Eecc-cccccCCCccceEEEEeCCCCceEEc-cCCCc--c-cceeEEE
Q psy10286 438 STVEVFDPLVGRWQMAEE-----E-TLSNAV-ISTK-SCLTKAGDSLSTVEVFDPLVGRWQMA-EAMSM--L-RSRVGVA 505 (748)
Q Consensus 438 ~~~~~y~~~~~~W~~~~~-----~-~~~~~~-~~~~-~~~~~~g~~~~~~~~yd~~~~~W~~~-~~~~~--~-r~~~~~~ 505 (748)
..+.+||+.++++..... . .....+ +..+ +.++.... .+.++.||+. ++...+ ..... + ..-.+++
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~ 123 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCA 123 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEE
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEE
Confidence 358899988888865432 1 111222 2233 44444322 2378999998 777665 33221 1 1122333
Q ss_pred EE-CCEEEEEccCCC----------CCCCCeEEEEECCCCeEEEcc-CCCCCcceeEEEEE-----CC-EEEEEeCCCCC
Q psy10286 506 VM-KNRLYAFGGYNG----------SERLSTVEEFDPVRRVWNKVS-PMCFKRSAVGAAAL-----ND-KLYVCGGYDGV 567 (748)
Q Consensus 506 ~~-~~~iyv~GG~~~----------~~~~~~v~~yd~~t~~W~~~~-~~~~~r~~~~~~~~-----~~-~iyv~GG~~~~ 567 (748)
.. ++.+|+.....+ ......+++||+. .+...+. .... ..+.+.. ++ .+|+....
T Consensus 124 ~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~---~~~i~~~~~~d~dg~~l~v~~~~--- 196 (314)
T 1pjx_A 124 FDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF---PNGIAVRHMNDGRPYQLIVAETP--- 196 (314)
T ss_dssp ECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS---EEEEEEEECTTSCEEEEEEEETT---
T ss_pred ECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC---cceEEEecccCCCCCEEEEEECC---
Confidence 33 678888654221 1123579999987 5554432 1111 1233333 34 57776542
Q ss_pred CCCceEEEEeCC-CCeEEE---ccCCCCC--CcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCC
Q psy10286 568 SSLNTVECYEPD-KDQWRI---VKSMQKH--RSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKR 640 (748)
Q Consensus 568 ~~~~~~~~yd~~-~~~W~~---~~~~~~~--r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 640 (748)
...+++||+. ++++.. ...++.. ..-..++.. +|.+|+.... .+.+.+||+.+.+....-..+. .
T Consensus 197 --~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~-~ 268 (314)
T 1pjx_A 197 --TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----SSHIEVFGPDGGQPKMRIRCPF-E 268 (314)
T ss_dssp --TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-----TTEEEEECTTCBSCSEEEECSS-S
T ss_pred --CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-----CCEEEEEcCCCCcEeEEEeCCC-C
Confidence 2578889876 444322 1222221 111223332 6788887532 2469999998544221112222 1
Q ss_pred cceeEEEE-CCE-EEEEeccCCCccccEEEEEeCCCC
Q psy10286 641 CRLGVAAL-NNK-IYVCGGYDGAIFLQSVEMYDPITD 675 (748)
Q Consensus 641 ~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 675 (748)
.-.+++.- ++. ||+.+..+ +.+++|++...
T Consensus 269 ~~~~i~~~~dg~~l~v~~~~~-----~~l~~~~~~~~ 300 (314)
T 1pjx_A 269 KPSNLHFKPQTKTIFVTEHEN-----NAVWKFEWQRN 300 (314)
T ss_dssp CEEEEEECTTSSEEEEEETTT-----TEEEEEECSSC
T ss_pred CceeEEECCCCCEEEEEeCCC-----CeEEEEeCCCC
Confidence 22233322 444 77766432 47899998764
No 207
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.72 E-value=1.3 Score=50.48 Aligned_cols=243 Identities=12% Similarity=-0.010 Sum_probs=123.4
Q ss_pred ceEEEEeCCCCceEEccCCCc---cc-ceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSM---LR-SRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVG 550 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~---~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~ 550 (748)
..+|+.+...+.|+.+-+... .. .......+ +|+..+++...++.....++++|..+++...... +... ..+
T Consensus 98 ~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~~-~~~ 175 (710)
T 2xdw_A 98 RVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVK-FSC 175 (710)
T ss_dssp CEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEEC-SCC
T ss_pred EEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCcc-cce
Confidence 456677666666665532211 11 11122222 6665555543333333479999999998765321 1111 112
Q ss_pred EEEE-CCEEEEEeCCCCC-----------CCCceEEEEeCCCCeEE--EccCCC-CCCcceEEEEE-CCEEEEEccCCCC
Q psy10286 551 AAAL-NDKLYVCGGYDGV-----------SSLNTVECYEPDKDQWR--IVKSMQ-KHRSAGGVIAF-DSYVYALGGHDGL 614 (748)
Q Consensus 551 ~~~~-~~~iyv~GG~~~~-----------~~~~~~~~yd~~~~~W~--~~~~~~-~~r~~~~~~~~-~~~iyv~GG~~~~ 614 (748)
.+.. ||+-++++..++. .....++.++..+.... .+-..+ .+......... +|+..+++...+.
T Consensus 176 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 255 (710)
T 2xdw_A 176 MAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC 255 (710)
T ss_dssp EEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS
T ss_pred EEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC
Confidence 3333 5554444443322 22456888998876531 221111 12222233222 4543333332222
Q ss_pred cccCeEEEEECCC------C--cEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCC---cEEEccCC
Q psy10286 615 SIFDSVERYDPKT------D--EWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITD---EWKMIASM 683 (748)
Q Consensus 615 ~~~~~~~~yd~~~------~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~ 683 (748)
...+.++.+|..+ . .+..+....... ......-++.+|+.+..++ ....++.+|..+. .|+.+...
T Consensus 256 ~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~ 332 (710)
T 2xdw_A 256 DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLVPE 332 (710)
T ss_dssp SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECC
T ss_pred CCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceeccCC
Confidence 1246899999876 4 577765322211 1222334678888875432 2467999998775 58877432
Q ss_pred CCCCcceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCCc-eEec
Q psy10286 684 NVMRSRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTDS-WAFV 727 (748)
Q Consensus 684 p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~~-W~~~ 727 (748)
.....-..+... ++++++.+..++. ..++++|+.++. .+.+
T Consensus 333 ~~~~~~~~~~~~~~~~lv~~~~~~g~---~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 333 HEKDVLEWVACVRSNFLVLCYLHDVK---NTLQLHDLATGALLKIF 375 (710)
T ss_dssp CSSCEEEEEEEETTTEEEEEEEETTE---EEEEEEETTTCCEEEEE
T ss_pred CCCCeEEEEEEEcCCEEEEEEEECCE---EEEEEEECCCCCEEEec
Confidence 221122334445 7788877654432 468888985554 3444
No 208
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.70 E-value=0.87 Score=46.05 Aligned_cols=210 Identities=12% Similarity=0.070 Sum_probs=103.4
Q ss_pred CccceEEEEeC-CCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCC---e----EEEccCCCCC
Q psy10286 474 DSLSTVEVFDP-LVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRR---V----WNKVSPMCFK 545 (748)
Q Consensus 474 ~~~~~~~~yd~-~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~---~----W~~~~~~~~~ 545 (748)
..-..+..||. .+++...+...+....-.+++...+..++.|+.+ ..+..||..+. . .+.+..+...
T Consensus 76 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp ETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred cCCCeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeC
Confidence 33457899999 8887766654111222223333335556666644 46777876640 0 2222233333
Q ss_pred cceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCC-Ce--EEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeE
Q psy10286 546 RSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDK-DQ--WRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSV 620 (748)
Q Consensus 546 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~--W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 620 (748)
..-.+++...+. ++.|+.+ ..+..||..+ .. ...... +....-.+++.. ++..++.|+.++ .+
T Consensus 151 ~~v~~~~~~~~~-l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~dg-----~i 218 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVGMNN-----SQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSIDG-----RV 218 (342)
T ss_dssp CCEEEEEECSSE-EEEEEST-----TEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETTS-----EE
T ss_pred CceEEEEecCCc-EEEEeCC-----CeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecCC-----cE
Confidence 333344444555 5555543 4688899877 32 222211 111112233333 467777777643 35
Q ss_pred EEEECCCC--------cEEEccCCC--C---CCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCC
Q psy10286 621 ERYDPKTD--------EWTSVKPML--T---KRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNV 685 (748)
Q Consensus 621 ~~yd~~~~--------~W~~~~~~p--~---~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 685 (748)
..||.... ......... . .......+.+ +++.++.|+.+ ..+.+||..+.+-.. .+..
T Consensus 219 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~vwd~~~~~~~~--~~~~ 291 (342)
T 1yfq_A 219 AVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD-----GIISCWNLQTRKKIK--NFAK 291 (342)
T ss_dssp EEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT-----SCEEEEETTTTEEEE--ECCC
T ss_pred EEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC-----ceEEEEcCccHhHhh--hhhc
Confidence 55444332 222111100 0 0112223333 56777777754 368899988765433 2222
Q ss_pred C--CcceEEEEECCEEEEEeCCCCC
Q psy10286 686 M--RSRVALVANMGKLWAIGGYDGV 708 (748)
Q Consensus 686 ~--r~~~~~~~~~~~l~v~GG~~~~ 708 (748)
. ..-.+++ -++++++.||.++.
T Consensus 292 ~h~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 292 FNEDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp CSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred ccCCCceEec-CCCCeEEEEecCCc
Confidence 1 1122334 77888888876653
No 209
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.69 E-value=1 Score=46.80 Aligned_cols=186 Identities=15% Similarity=0.219 Sum_probs=96.3
Q ss_pred EEEEEccCCCCCCCCeEEEEECCCCeEEEcc--CCCCCcc--eeEEEE--ECCEEEEEeCCCCCCCCceEEEEeCCCCe-
Q psy10286 510 RLYAFGGYNGSERLSTVEEFDPVRRVWNKVS--PMCFKRS--AVGAAA--LNDKLYVCGGYDGVSSLNTVECYEPDKDQ- 582 (748)
Q Consensus 510 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~--~~~~~r~--~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~- 582 (748)
..++.|+.+ ..+..||..+++-...- ..+.... -.++.. .++.+++.||.+ ..+..||.....
T Consensus 171 ~~l~s~s~D-----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-----~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 171 TRLITGSGD-----QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-----TTVRLWDLRITSR 240 (380)
T ss_dssp SCEEEECTT-----SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-----SCEEEEETTTTCC
T ss_pred CEEEEECCC-----CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-----CeEEEEECCCCCc
Confidence 345556543 46888998887644321 2222111 112222 267788888865 357788875321
Q ss_pred -EEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCC-----CcceeEEE--ECCEEE
Q psy10286 583 -WRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTK-----RCRLGVAA--LNNKIY 653 (748)
Q Consensus 583 -W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-----r~~~~~~~--~~~~i~ 653 (748)
-..... ....-.+++.. ++..++.|+.++ .+..||..+..-...-..... ......+. .+++++
T Consensus 241 ~~~~~~~--h~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 313 (380)
T 3iz6_a 241 AVRTYHG--HEGDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLL 313 (380)
T ss_dssp CCEEECC--CSSCCCEEEECTTSSEEEEECSSS-----CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEE
T ss_pred ceEEECC--cCCCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEE
Confidence 111110 00111122222 667777887754 588899887754332111111 11112222 367777
Q ss_pred EEeccCCCccccEEEEEeCCCCcEEE-ccCCCCC---CcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 654 VCGGYDGAIFLQSVEMYDPITDEWKM-IASMNVM---RSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~---r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
+.|+.+ ..+.+||..+.+-.. +..+..+ +-......-+++.++.||.++ .+.+|+....
T Consensus 314 ~~g~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~-----~i~iW~~~~~ 376 (380)
T 3iz6_a 314 FAGYSN-----GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK-----NLKIWAFSGH 376 (380)
T ss_dssp EEECTT-----SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-----CEEEEECCSS
T ss_pred EEEECC-----CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-----CEEEEecCCC
Confidence 787754 368899987765432 3322221 111222223678888888654 4777777653
No 210
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.68 E-value=0.86 Score=50.39 Aligned_cols=229 Identities=9% Similarity=0.042 Sum_probs=122.3
Q ss_pred ccceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECC--CCeEEEccCCCCCcceeE
Q psy10286 475 SLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPV--RRVWNKVSPMCFKRSAVG 550 (748)
Q Consensus 475 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~--t~~W~~~~~~~~~r~~~~ 550 (748)
..+.+..+|+.+++-... ++....-|.++.. +.++|+.+. ...+..||+. +.+ .+..++.+..-..
T Consensus 175 ~~~~V~viD~~t~~v~~~--i~~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~~--~v~~i~~G~~P~~ 244 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTV--LDTGYAVHISRLSASGRYLFVIGR------DGKVNMIDLWMKEPT--TVAEIKIGSEARS 244 (567)
T ss_dssp TTTEEEEEETTTCCEEEE--EECSSCEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCC--EEEEEECCSEEEE
T ss_pred CCCeEEEEECCCCeEEEE--EeCCCCccceEECCCCCEEEEEcC------CCeEEEEECCCCCCc--EeEEEecCCCCce
Confidence 346899999998764321 2222222344433 456887542 2479999995 443 3333333333334
Q ss_pred EEEE-----CC-EEEEEeCCCCCCCCceEEEEeCCCCeEEEc-c--CC--------CCCCcceEEEEECCEEEEEccCCC
Q psy10286 551 AAAL-----ND-KLYVCGGYDGVSSLNTVECYEPDKDQWRIV-K--SM--------QKHRSAGGVIAFDSYVYALGGHDG 613 (748)
Q Consensus 551 ~~~~-----~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~--~~--------~~~r~~~~~~~~~~~iyv~GG~~~ 613 (748)
++.. +| .+|+..-. -+.+.++|..+.+=... + .+ |.+|.....+..++..+++--.
T Consensus 245 ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~-- 317 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK-- 317 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET--
T ss_pred eEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec--
Confidence 4444 45 67665432 25677888776543222 1 11 1223332222233333333211
Q ss_pred CcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CCE-EEEEeccCCCccccEEEEEeCCCCcEEE---c-cCCCCCC
Q psy10286 614 LSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NNK-IYVCGGYDGAIFLQSVEMYDPITDEWKM---I-ASMNVMR 687 (748)
Q Consensus 614 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~---~-~~~p~~r 687 (748)
....++..|........+...+..+..|....- +++ +|+... ..+.|.++|.++++=.. + +..|.+.
T Consensus 318 --~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~ViD~~t~kl~~~i~vgg~~Phpg 390 (567)
T 1qks_A 318 --ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN-----ARNKLVVIDTKEGKLVAIEDTGGQTPHPG 390 (567)
T ss_dssp --TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEEEEEECSSSSBCCT
T ss_pred --CCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC-----CCCeEEEEECCCCcEEEEEeccCcCCCCc
Confidence 135788899887766666556666776665543 344 444432 24789999999886432 3 4445553
Q ss_pred cceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCC-----ceEecCCCC
Q psy10286 688 SRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTD-----SWAFVAPMC 731 (748)
Q Consensus 688 ~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~-----~W~~~~~~~ 731 (748)
.+.....- ++.+|+.+-.. ...|.++|..+. .|+.+..++
T Consensus 391 ~g~~~~~p~~g~v~~t~~~g----~~~Vsvid~~~~~~~~~~~kvv~~i~ 436 (567)
T 1qks_A 391 RGANFVHPTFGPVWATSHMG----DDSVALIGTDPEGHPDNAWKILDSFP 436 (567)
T ss_dssp TCEEEEETTTEEEEEEEBSS----SSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred cceeeECCCCCcEEEeCCCC----CCeEEEecCCCCCCccccCEEEEEEe
Confidence 34433222 36788765322 136888887663 387665544
No 211
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.67 E-value=0.68 Score=46.92 Aligned_cols=200 Identities=10% Similarity=0.046 Sum_probs=105.5
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
++.+|+.+..+ ..+++||+.++++......+ ...-.+++.. +|++|+.+..+. .....+++||+.+......
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEEE
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEEE
Confidence 67788877532 47999999998877653211 1223344443 778888754321 1225799999988876532
Q ss_pred -cCCCCCCcceEEEEE-CCEEEEEccCC-CCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CC-EEEEEeccCCC
Q psy10286 587 -KSMQKHRSAGGVIAF-DSYVYALGGHD-GLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NN-KIYVCGGYDGA 661 (748)
Q Consensus 587 -~~~~~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~ 661 (748)
........-..++.. ++.+|+..... .......++++|+.+.+...+... .....+.+.- ++ .+|+....
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~--- 202 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETT--- 202 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGG---
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCC---
Confidence 222111111222222 67888765321 111234799999988776654211 0111233322 34 57777532
Q ss_pred ccccEEEEEeCCC--CcEEEcc-----CCCCCCcceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCCceEe
Q psy10286 662 IFLQSVEMYDPIT--DEWKMIA-----SMNVMRSRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 662 ~~~~~v~~yd~~~--~~W~~~~-----~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (748)
.+.+++||..+ .....+. ..+....-.+++.- ++++|+.... ...+.+||+....-..
T Consensus 203 --~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~-----~~~v~~~d~~g~~~~~ 268 (333)
T 2dg1_A 203 --ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG-----QGRVLVFNKRGYPIGQ 268 (333)
T ss_dssp --GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-----TTEEEEECTTSCEEEE
T ss_pred --CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-----CCEEEEECCCCCEEEE
Confidence 25789999854 2333221 11111111222322 5778886531 1368889886544333
No 212
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.67 E-value=1.4 Score=46.05 Aligned_cols=215 Identities=15% Similarity=0.110 Sum_probs=102.7
Q ss_pred ccceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEE
Q psy10286 475 SLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAA 553 (748)
Q Consensus 475 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~ 553 (748)
.-..+..||..+++-...-.- ....-.+++.. ++..++.|+.+ ..+..||..+.+....-.... .-.+++.
T Consensus 143 ~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~~~--~v~~~~~ 214 (393)
T 1erj_A 143 EDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLTLSIED--GVTTVAV 214 (393)
T ss_dssp TTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSS--CEEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEEEEEcCC--CcEEEEE
Confidence 345688888887654322110 11111223332 55566677644 468889998886543322211 1122223
Q ss_pred E--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCC-----CCCCcc-eEEEEE-CCEEEEEccCCCCcccCeEEEEE
Q psy10286 554 L--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSM-----QKHRSA-GGVIAF-DSYVYALGGHDGLSIFDSVERYD 624 (748)
Q Consensus 554 ~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-----~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd 624 (748)
. ++++++.|+.+ ..+..||..+..-...-.. ...... .+++.. ++..++.|+.++ .+..||
T Consensus 215 ~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~-----~v~~wd 284 (393)
T 1erj_A 215 SPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR-----SVKLWN 284 (393)
T ss_dssp CSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS-----EEEEEE
T ss_pred ECCCCCEEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC-----EEEEEE
Confidence 2 67788888865 3578889887654322110 001111 122222 566777777643 577788
Q ss_pred CCCCcEEEccCCC----------CCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEE
Q psy10286 625 PKTDEWTSVKPML----------TKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVAL 692 (748)
Q Consensus 625 ~~~~~W~~~~~~p----------~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 692 (748)
..+..-......+ ........+.+ ++..++.||.+ ..+.+||..+.+-.. .+.........
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D-----~~v~iwd~~~~~~~~--~l~~h~~~v~~ 357 (393)
T 1erj_A 285 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD-----RGVLFWDKKSGNPLL--MLQGHRNSVIS 357 (393)
T ss_dssp C---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT-----SEEEEEETTTCCEEE--EEECCSSCEEE
T ss_pred CCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCeEEE--EECCCCCCEEE
Confidence 7653221110000 00001111222 45666777654 468889987765322 11111122222
Q ss_pred EE-E-------CCEEEEEeCCCCCCCCCeEEEEeC
Q psy10286 693 VA-N-------MGKLWAIGGYDGVSNLPTVEVYDP 719 (748)
Q Consensus 693 ~~-~-------~~~l~v~GG~~~~~~~~~v~~yd~ 719 (748)
+. . ++.+++.||.++ .+.++|.
T Consensus 358 v~~~~~~~~~p~~~~l~sgs~Dg-----~i~iW~~ 387 (393)
T 1erj_A 358 VAVANGSSLGPEYNVFATGSGDC-----KARIWKY 387 (393)
T ss_dssp EEECSSCTTCTTCEEEEEEETTS-----EEEEEEE
T ss_pred EEecCCcCcCCCCCEEEEECCCC-----cEEECcc
Confidence 22 2 367888888653 4566554
No 213
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=95.66 E-value=0.72 Score=43.35 Aligned_cols=144 Identities=12% Similarity=0.091 Sum_probs=84.3
Q ss_pred EEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEE--Ec----cCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEE
Q psy10286 503 GVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWN--KV----SPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVE 574 (748)
Q Consensus 503 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~--~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 574 (748)
+++..+|.+|+|=| ..+|+++.....+. .+ +.+|.. -. ++... ++++|+|-| +.+|
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~-iD-Aa~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPNR-ID-AAYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCSS-CC-EEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCCC-cc-EEEEeccCCcEEEEcc-------CEEE
Confidence 44557999999977 46888887654432 22 344532 22 23333 689999988 5678
Q ss_pred EEeCCCCeE---EEccCCCCCC--cceEEE-EE--CCEEEEEccCCCCcccCeEEEEECCCCcEEE-----c----cCCC
Q psy10286 575 CYEPDKDQW---RIVKSMQKHR--SAGGVI-AF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTS-----V----KPML 637 (748)
Q Consensus 575 ~yd~~~~~W---~~~~~~~~~r--~~~~~~-~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~----~~~p 637 (748)
+|+..+-.- ..+..+..|. ..--+| .. ++++|+|-|. ..|+||..+++-.. + +.+|
T Consensus 92 ~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~-------~ywr~d~~~~~~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN-------QVWRYDDTNHIMDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp EESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT-------EEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC-------EEEEEeCcCccccCCCCccHHHcCCCCC
Confidence 886432110 2222221221 122223 22 4899999884 79999987654221 1 1122
Q ss_pred CCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEE
Q psy10286 638 TKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWK 678 (748)
Q Consensus 638 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 678 (748)
..-.++...++++|++-| +..|.||..+++=.
T Consensus 165 --~~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 165 --DKVDAVYEKNGYIYFFNG-------PIQFEYSIWSNRIV 196 (207)
T ss_dssp --SCCSEEEEETTEEEEEET-------TEEEEEETTTTEEE
T ss_pred --CCccEEEEcCCcEEEEEC-------CEEEEEeCCccEEe
Confidence 222344456899999987 68899998876543
No 214
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.64 E-value=1.1 Score=49.82 Aligned_cols=120 Identities=15% Similarity=0.176 Sum_probs=70.9
Q ss_pred EEEECCEEEEEccCCCCCCCCeEEEEEC-CCC--eEEEccCCCCC--------cceeEEEE--ECCE----EEEEeCCCC
Q psy10286 504 VAVMKNRLYAFGGYNGSERLSTVEEFDP-VRR--VWNKVSPMCFK--------RSAVGAAA--LNDK----LYVCGGYDG 566 (748)
Q Consensus 504 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~-~t~--~W~~~~~~~~~--------r~~~~~~~--~~~~----iyv~GG~~~ 566 (748)
-++.++.||+.+.. ...++.+|. .+. .|+.-...+.. ....+.++ .+++ ||+...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~--- 129 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL--- 129 (599)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---
Confidence 35669999998652 246899999 766 48875443211 11123444 5777 887532
Q ss_pred CCCCceEEEEeCCCCe--EEEccCCCCC--CcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCc--EEEcc
Q psy10286 567 VSSLNTVECYEPDKDQ--WRIVKSMQKH--RSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDE--WTSVK 634 (748)
Q Consensus 567 ~~~~~~~~~yd~~~~~--W~~~~~~~~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~ 634 (748)
-..+..+|..+.+ |+.-..-+.. ....+-++.++.+|+-.+.........++.||..+.+ |+.-.
T Consensus 130 ---dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 ---DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ---CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 1478999988775 8764321111 1122335568888764432111123579999998765 87643
No 215
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.60 E-value=0.96 Score=46.07 Aligned_cols=187 Identities=11% Similarity=0.057 Sum_probs=93.6
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEE---ECCEEEEEeCCCCCCCCceEEEEeCCCCeEE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAA---LNDKLYVCGGYDGVSSLNTVECYEPDKDQWR 584 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 584 (748)
++..++.|+.+ ..+..||..+.+......-.. .-.+++. -++..++.|+.+ ..+..||..+.+-.
T Consensus 97 ~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 97 DGSKVFTASCD-----KTAKMWDLSSNQAIQIAQHDA--PVKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPM 164 (368)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECSS--CEEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCS
T ss_pred CCCEEEEEcCC-----CcEEEEEcCCCCceeeccccC--ceEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEE
Confidence 56666677644 478899999887655432221 2223332 266777788755 46888888765421
Q ss_pred EccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCc--EEEccCCCCCCcceeEEEEC----CEEEEEecc
Q psy10286 585 IVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDE--WTSVKPMLTKRCRLGVAALN----NKIYVCGGY 658 (748)
Q Consensus 585 ~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~----~~i~v~GG~ 658 (748)
.. +..+....+.....+.+++.++. ..+..||..... +..+...............+ ...++.|+.
T Consensus 165 ~~--~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (368)
T 3mmy_A 165 MV--LQLPERCYCADVIYPMAVVATAE------RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI 236 (368)
T ss_dssp EE--EECSSCEEEEEEETTEEEEEEGG------GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET
T ss_pred EE--EecCCCceEEEecCCeeEEEeCC------CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC
Confidence 11 11122223334445555544432 357778876543 33332211111111112222 233666665
Q ss_pred CCCccccEEEEEeCCCCcE-----EEccC--C--CCCCc----ceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 659 DGAIFLQSVEMYDPITDEW-----KMIAS--M--NVMRS----RVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 659 ~~~~~~~~v~~yd~~~~~W-----~~~~~--~--p~~r~----~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
+ ..+.+||.....- ..-+. . ..... ....+.+ ++++++.||.++ .+.+||..++.
T Consensus 237 d-----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg-----~i~iwd~~~~~ 306 (368)
T 3mmy_A 237 E-----GRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG-----RFSFWDKDART 306 (368)
T ss_dssp T-----SEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS-----CEEEEETTTTE
T ss_pred C-----CcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC-----eEEEEECCCCc
Confidence 4 4677888766421 11000 0 00000 1222223 577778887553 58899988764
Q ss_pred e
Q psy10286 724 W 724 (748)
Q Consensus 724 W 724 (748)
-
T Consensus 307 ~ 307 (368)
T 3mmy_A 307 K 307 (368)
T ss_dssp E
T ss_pred E
Confidence 3
No 216
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.58 E-value=1.9 Score=45.04 Aligned_cols=187 Identities=11% Similarity=0.073 Sum_probs=106.8
Q ss_pred eEEEEECCC--CeEEEccCCCCCcceeEEEEE---CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCC---CCC--C-
Q psy10286 525 TVEEFDPVR--RVWNKVSPMCFKRSAVGAAAL---NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSM---QKH--R- 593 (748)
Q Consensus 525 ~v~~yd~~t--~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---~~~--r- 593 (748)
-+++++... .+|+...+.+....-++++.. ++.||+.+.... .-..+++.+....+|+.+... +.. +
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~ 109 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPEGE 109 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC---
T ss_pred ceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCccccc
Confidence 366777654 689876432223333444443 467887654211 112578887788899988632 211 1
Q ss_pred ------cceEEEEE----CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCC---CC--------------CCcceeEE
Q psy10286 594 ------SAGGVIAF----DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPM---LT--------------KRCRLGVA 646 (748)
Q Consensus 594 ------~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---p~--------------~r~~~~~~ 646 (748)
.-.+++.. .+.||+.+. ...+++.+....+|+.+... |. ....++++
T Consensus 110 ~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~ 183 (394)
T 3b7f_A 110 TGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSIL 183 (394)
T ss_dssp -CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEE
T ss_pred ccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEE
Confidence 11123332 567877543 13688998888899998532 21 11123333
Q ss_pred EE---CCEEEEEeccCCCccccEEEEEeCCCCcEEEccC------CCCC-----CcceEEEEE-C--CEEEEEeCCCCCC
Q psy10286 647 AL---NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIAS------MNVM-----RSRVALVAN-M--GKLWAIGGYDGVS 709 (748)
Q Consensus 647 ~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~------~p~~-----r~~~~~~~~-~--~~l~v~GG~~~~~ 709 (748)
.- .+.||+.++. ..+++.+-...+|+.+.. +|.+ ...+.++.. . +.||+..+
T Consensus 184 ~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~----- 252 (394)
T 3b7f_A 184 VDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH----- 252 (394)
T ss_dssp ECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET-----
T ss_pred ECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC-----
Confidence 32 2567776432 357888888889998743 1211 122344433 2 67777432
Q ss_pred CCCeEEEEeCCCCceEecCC-CCC
Q psy10286 710 NLPTVEVYDPSTDSWAFVAP-MCA 732 (748)
Q Consensus 710 ~~~~v~~yd~~~~~W~~~~~-~~~ 732 (748)
..+++.+-...+|+.+.. +|.
T Consensus 253 --~gl~~s~D~G~tW~~~~~~l~~ 274 (394)
T 3b7f_A 253 --CGIYRMDRREGVWKRIGDAMPR 274 (394)
T ss_dssp --TEEEEEETTTTEEECGGGGSCT
T ss_pred --CeEEEeCCCCCcceECCCCCCC
Confidence 358888888999998864 554
No 217
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.58 E-value=0.0036 Score=52.77 Aligned_cols=86 Identities=12% Similarity=0.100 Sum_probs=60.9
Q ss_pred cEEEEECCeEEeeeeeeeeccC-HHHHHhhcccccccccceeeeecchheehhhccccccccccccccccccceeeeecC
Q psy10286 76 DVTIKVDDQSFTCHRIVLAATI-PYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQG 154 (748)
Q Consensus 76 Dv~i~~~~~~~~aHk~iL~a~S-~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 154 (748)
=|+|.|+|+.|...+..|.... ..+.+|+.+...- .....++-+ +
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~---------------------------------~~~~g~~Fi-D 51 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNY---------------------------------DPVLNEYFF-D 51 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTE---------------------------------ETTTTEEEE-C
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCC---------------------------------CCCCCcEEE-e
Confidence 3788999999999999987542 2345555431100 011222222 5
Q ss_pred CCHHHHHHHHHhhhceeEEeech-hHHHHHHHHHHhcchhHH
Q psy10286 155 IDAVAMEALINFVYSGRVTIHSQ-NVQSLMVVASFLQMQKVA 195 (748)
Q Consensus 155 ~~~~~~~~~l~flYtg~~~i~~~-~v~~ll~~A~~l~i~~l~ 195 (748)
=++..|+.+|+|+.+|++.++.+ .+..+++-|++|+|+...
T Consensus 52 Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea~fy~i~~~~ 93 (115)
T 3kvt_A 52 RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEELEFWGLDSNQ 93 (115)
T ss_dssp SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHHHHHTCCGGG
T ss_pred cChHHHHHHHHHhcCCCCCCCCcccHHHHHHHHHHhCCChHH
Confidence 68999999999999999987765 578899999999998754
No 218
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.58 E-value=0.66 Score=53.20 Aligned_cols=191 Identities=8% Similarity=-0.042 Sum_probs=91.9
Q ss_pred eEEEEECCC-CeEEEccCC-CCCcc-eeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCC----CcceE
Q psy10286 525 TVEEFDPVR-RVWNKVSPM-CFKRS-AVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKH----RSAGG 597 (748)
Q Consensus 525 ~v~~yd~~t-~~W~~~~~~-~~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~----r~~~~ 597 (748)
.++.+|..+ .+-..+... ..... ...+. -+|+..+++..+.......++.+|+.+.+...+...... .....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 788899887 664444321 11111 11222 455444444332222346899999999887665322111 11122
Q ss_pred EEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeE--EEECC-EEEEEeccCCCccccEEEEEeCCC
Q psy10286 598 VIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGV--AALNN-KIYVCGGYDGAIFLQSVEMYDPIT 674 (748)
Q Consensus 598 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~-~i~v~GG~~~~~~~~~v~~yd~~~ 674 (748)
+..-+|++++.++.++ ...+|.+|.... +..+..-. ...... ..-++ .|++.+..++ .....+|..+...
T Consensus 343 ~~spdg~~~~~~~~~g---~~~l~~~~~~~~-~~~l~~~~--~~v~~~~~~s~dg~~l~~~~~~~~-~~~~~l~~~~~~g 415 (741)
T 2ecf_A 343 RFLDDGSILWSSERTG---FQHLYRIDSKGK-AAALTHGN--WSVDELLAVDEKAGLAYFRAGIES-ARESQIYAVPLQG 415 (741)
T ss_dssp EECTTSCEEEEECTTS---SCEEEEECSSSC-EEESCCSS--SCEEEEEEEETTTTEEEEEECSSC-TTCBEEEEEETTC
T ss_pred EECCCCeEEEEecCCC---ccEEEEEcCCCC-eeeeeecc--eEEEeEeEEeCCCCEEEEEEeCCC-CceEEEEEEEcCC
Confidence 2223667666665543 357999997666 66554321 111122 22244 5666654332 1234567776654
Q ss_pred CcEEEccCCCCCCcceEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCCCCceEec
Q psy10286 675 DEWKMIASMNVMRSRVALVA-NMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 675 ~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (748)
..-..+.. ....+.+.. -+++.+++...+.. .-..++++|..+...+.+
T Consensus 416 ~~~~~l~~---~~~~~~~~~spdg~~l~~~~~~~~-~p~~~~l~~~~~~~~~~l 465 (741)
T 2ecf_A 416 GQPQRLSK---APGMHSASFARNASVYVDSWSNNS-TPPQIELFRANGEKIATL 465 (741)
T ss_dssp CCCEECCC---SCSEEEEEECTTSSEEEEEEEETT-EEEEEEEEETTSCEEECS
T ss_pred CCeeeccc---CCCceEEEECCCCCEEEEEecCCC-CCCeEEEEEcCCCeEEEe
Confidence 43344433 111122222 24554444332211 223678888766654443
No 219
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.58 E-value=2.3 Score=43.09 Aligned_cols=218 Identities=11% Similarity=0.095 Sum_probs=118.3
Q ss_pred EEEEeCCCCceEEccCC-Cccc-ceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCC-CCcceeEEEE-E
Q psy10286 479 VEVFDPLVGRWQMAEAM-SMLR-SRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC-FKRSAVGAAA-L 554 (748)
Q Consensus 479 ~~~yd~~~~~W~~~~~~-~~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~-~~r~~~~~~~-~ 554 (748)
+++..-.-.+|+.+... +.+. ...++...++.+|+.|.. ..+++-+-.-.+|+.+.... .+-....++. -
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~ 131 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP------PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALG 131 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET------TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEE
T ss_pred EEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC------CeEEEECCCCCCceECccccCCCCCeEEEEEEC
Confidence 55544445689988642 2222 334455557889987632 24555444456899976431 1212233433 3
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECC-CCcEEE
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPK-TDEWTS 632 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~ 632 (748)
++.+|+.|.. ..+++-+-.-.+|+.+.... +...++++.. ++.+|++|.. ..+++-+-. ...|+.
T Consensus 132 ~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~~------G~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 132 NGSAEMITNV------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSSR------GSFYSTWEPGQTAWEP 198 (327)
T ss_dssp TTEEEEEETT------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEETT------SSEEEEECTTCSSCEE
T ss_pred CCCEEEEeCC------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEECC------CcEEEEeCCCCCceeE
Confidence 7889888752 13555444467899886432 2233444443 5667766532 235555433 678998
Q ss_pred ccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCC-CCcEEEccCC--CCCCcceEEEEE-CCEEEEEeCCCC
Q psy10286 633 VKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPI-TDEWKMIASM--NVMRSRVALVAN-MGKLWAIGGYDG 707 (748)
Q Consensus 633 ~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~--p~~r~~~~~~~~-~~~l~v~GG~~~ 707 (748)
+.. +.+...+.++.. ++.+|+++.. ..++..+.. -.+|+.+... +.....+.++.. ++.+|+.|+.
T Consensus 199 ~~~-~~~~~~~~~~~~~~g~~~~~~~~------G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~-- 269 (327)
T 2xbg_A 199 HNR-TTSRRLHNMGFTPDGRLWMIVNG------GKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA-- 269 (327)
T ss_dssp EEC-CSSSCEEEEEECTTSCEEEEETT------TEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST--
T ss_pred CCC-CCCCccceeEECCCCCEEEEeCC------ceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC--
Confidence 853 333444444433 5778877642 235555323 5689887532 332223333333 5788888762
Q ss_pred CCCCCeEEEEeCCCCceEecC
Q psy10286 708 VSNLPTVEVYDPSTDSWAFVA 728 (748)
Q Consensus 708 ~~~~~~v~~yd~~~~~W~~~~ 728 (748)
..+++-.=...+|+.+.
T Consensus 270 ----g~i~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 270 ----GALLCSQDGGQTWQQDV 286 (327)
T ss_dssp ----TCEEEESSTTSSCEECG
T ss_pred ----CeEEEeCCCCcccEEcC
Confidence 13544333357899875
No 220
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.56 E-value=0.51 Score=48.07 Aligned_cols=225 Identities=11% Similarity=0.184 Sum_probs=108.2
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeecccc----cccceEEecc---cccccCCCccceEEEEeCCCCc--eEE
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEE----TLSNAVISTK---SCLTKAGDSLSTVEVFDPLVGR--WQM 491 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~----~~~~~~~~~~---~~~~~~g~~~~~~~~yd~~~~~--W~~ 491 (748)
+..+++.|+... .-..+..||..++........ .+....+... +.....|..-..+..||..+++ ...
T Consensus 30 ~~~l~~~~s~~~---~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 106 (357)
T 3i2n_A 30 SAKFVTMGNFAR---GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYS 106 (357)
T ss_dssp SSEEEEEEC--C---CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEE
T ss_pred CceEEEecCccC---CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEE
Confidence 335666776421 114688888887776543221 1111122222 1222223334568888888765 222
Q ss_pred ccCCCcccceeEEEE-------ECCEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCCC--CcceeEEEE-----EC
Q psy10286 492 AEAMSMLRSRVGVAV-------MKNRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMCF--KRSAVGAAA-----LN 555 (748)
Q Consensus 492 ~~~~~~~r~~~~~~~-------~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~--~r~~~~~~~-----~~ 555 (748)
+.....+- .++.. -++..++.|+.+ ..+..||..+.. ...+..... .+.-.+++. -+
T Consensus 107 ~~~~~~~v--~~~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 107 VKGHKEII--NAIDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE 179 (357)
T ss_dssp ECCCSSCE--EEEEEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C
T ss_pred EEecccce--EEEeeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC
Confidence 22111111 11211 245667777754 358888888754 233322111 122223321 36
Q ss_pred CEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE----CCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 556 DKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF----DSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 556 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
+..++.|+.+ ..+..||..+..-....... ..-.+++.. ++..++.|+.++ .+..||..+.+
T Consensus 180 ~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~-- 245 (357)
T 3i2n_A 180 ERVVCAGYDN-----GDIKLFDLRNMALRWETNIK--NGVCSLEFDRKDISMNKLVATSLEG-----KFHVFDMRTQH-- 245 (357)
T ss_dssp CCEEEEEETT-----SEEEEEETTTTEEEEEEECS--SCEEEEEESCSSSSCCEEEEEESTT-----EEEEEEEEEEE--
T ss_pred CCEEEEEccC-----CeEEEEECccCceeeecCCC--CceEEEEcCCCCCCCCEEEEECCCC-----eEEEEeCcCCC--
Confidence 7777777754 47889999887743332221 122233333 466677776643 57777765421
Q ss_pred EccCCC-----CCCcc-eeEEEE-CCE-EEEEeccCCCccccEEEEEeCCC
Q psy10286 632 SVKPML-----TKRCR-LGVAAL-NNK-IYVCGGYDGAIFLQSVEMYDPIT 674 (748)
Q Consensus 632 ~~~~~p-----~~r~~-~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~ 674 (748)
.+..++ ..... .+++.. ++. +++.||.++ .+.+||..+
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~ 291 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG-----GLHLWKYEY 291 (357)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS-----EEEEEEEEC
T ss_pred cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC-----cEEEeecCC
Confidence 111111 11112 223333 455 777777653 577777654
No 221
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.54 E-value=0.78 Score=47.95 Aligned_cols=261 Identities=13% Similarity=0.091 Sum_probs=125.0
Q ss_pred cceEeecCCCCcee-e---ccc-ccccceEEecccccccCCCccceEEEEeCCCC--ceEEccCCCcc-cceeEEEEE--
Q psy10286 438 STVEVFDPLVGRWQ-M---AEE-ETLSNAVISTKSCLTKAGDSLSTVEVFDPLVG--RWQMAEAMSML-RSRVGVAVM-- 507 (748)
Q Consensus 438 ~~~~~y~~~~~~W~-~---~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~--~W~~~~~~~~~-r~~~~~~~~-- 507 (748)
..+..||..++.-. . ... ..+....+..++.....|..-..+..||..+. ....+..+... ..-.+++..
T Consensus 45 ~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 124 (416)
T 2pm9_A 45 SSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAK 124 (416)
T ss_dssp CCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS
T ss_pred CeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCC
Confidence 36778877665421 1 111 11112222333333333333346788888761 11122212111 111223333
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCe------EE-EccCCC-CCcceeEEEEE-C-CEEEEEeCCCCCCCCceEEEEe
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRV------WN-KVSPMC-FKRSAVGAAAL-N-DKLYVCGGYDGVSSLNTVECYE 577 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~------W~-~~~~~~-~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd 577 (748)
++.+++.|+.+ ..+..||..+.+ -. ...... ....-.+++.. + +.+++.|+.+ ..+..||
T Consensus 125 ~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd 194 (416)
T 2pm9_A 125 QDNVLASGGNN-----GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-----NFASIWD 194 (416)
T ss_dssp STTBEEEECSS-----SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEE
Confidence 26677777754 357888887764 11 111111 11122233333 3 5788888754 4588999
Q ss_pred CCCCeEEEccCCCC-----CCcceEEEEE-C-CEEEEEccCCCCcccCeEEEEECCCCcEEEccCCC-CCCcceeEEEE-
Q psy10286 578 PDKDQWRIVKSMQK-----HRSAGGVIAF-D-SYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPML-TKRCRLGVAAL- 648 (748)
Q Consensus 578 ~~~~~W~~~~~~~~-----~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~- 648 (748)
..+.+....-..+. ...-.+++.. + ..+++.|+.++. ...+..||..+..- .+..+. ........+.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s 271 (416)
T 2pm9_A 195 LKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNANT-PLQTLNQGHQKGILSLDWC 271 (416)
T ss_dssp TTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEEC
T ss_pred CCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCCCC-CcEEeecCccCceeEEEeC
Confidence 98876544333222 1112223333 3 357777776431 12577888876431 111222 11222223333
Q ss_pred --CCEEEEEeccCCCccccEEEEEeCCCCcEEE-ccCCCCCCcceEEEEE-CC-EEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 649 --NNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-IASMNVMRSRVALVAN-MG-KLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 649 --~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
++.+++.|+.+ ..+.+||..+.+-.. +.....+ -.++... ++ ++++.|+.+ ..+.+||..+..
T Consensus 272 ~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~l~s~~~d-----~~i~iw~~~~~~ 339 (416)
T 2pm9_A 272 HQDEHLLLSSGRD-----NTVLLWNPESAEQLSQFPARGNW--CFKTKFAPEAPDLFACASFD-----NKIEVQTLQNLT 339 (416)
T ss_dssp SSCSSCEEEEESS-----SEEEEECSSSCCEEEEEECSSSC--CCCEEECTTCTTEEEECCSS-----SEEEEEESCCCC
T ss_pred CCCCCeEEEEeCC-----CCEEEeeCCCCccceeecCCCCc--eEEEEECCCCCCEEEEEecC-----CcEEEEEccCCC
Confidence 56788888764 468899987764332 2111111 1122222 44 688888754 357888876643
No 222
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.52 E-value=0.34 Score=50.36 Aligned_cols=183 Identities=10% Similarity=-0.002 Sum_probs=99.8
Q ss_pred EEEEEccCCCCCCCCeEEEEECCCCeEEEccCC-CCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 510 RLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPM-CFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 510 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~-~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
.+++.|+.+ ..+..||..+.+....-.. .....-.+++.. ++..++.|+.+ ..+..||..++.....
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVF 156 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEE
Confidence 566667654 3588899887776554332 222222333333 34677777754 4688899988776655
Q ss_pred cCCCCCCcc-eEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCE-EEEEeccCCC
Q psy10286 587 KSMQKHRSA-GGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNK-IYVCGGYDGA 661 (748)
Q Consensus 587 ~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~ 661 (748)
......... .+++.. ++..++.|+.+ ..+..||.....-..+.. .......+.+ ++. +++.|+.+
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~d-- 226 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKL---HKAKVTHAEFNPRCDWLMATSSVD-- 226 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEEC---SSSCEEEEEECSSCTTEEEEEETT--
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEecc---CCCcEEEEEECCCCCCEEEEEeCC--
Confidence 433221111 222222 56677777764 468889985444333321 1122223333 344 77788754
Q ss_pred ccccEEEEEeCCC----CcEEEccCCCCCCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 662 IFLQSVEMYDPIT----DEWKMIASMNVMRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 662 ~~~~~v~~yd~~~----~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
..+.+||..+ ......- .....-.++... +++.++.|+.+ ..+.+||..+.
T Consensus 227 ---~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d-----~~i~iwd~~~~ 283 (383)
T 3ei3_B 227 ---ATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQR-----NEIRVYSSYDW 283 (383)
T ss_dssp ---SEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESS-----SEEEEEETTBT
T ss_pred ---CEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCC-----CcEEEEECCCC
Confidence 4788898876 3332221 111111222222 56777777754 36888887664
No 223
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=95.43 E-value=1 Score=41.86 Aligned_cols=144 Identities=17% Similarity=0.167 Sum_probs=85.4
Q ss_pred EEEEECCEEEEEccCCCCCCCCeEEEEECCCC--eEE--Ec----cCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCce
Q psy10286 503 GVAVMKNRLYAFGGYNGSERLSTVEEFDPVRR--VWN--KV----SPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNT 572 (748)
Q Consensus 503 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~--~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 572 (748)
+++..+|.+|+|=| +.+|+++.... ... .+ +.+|... -++... ++++|+|-| +.
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~I--DAa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRKL--DSVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSSC--SEEEECTTTCCEEEEET-------TE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCCc--cEEEEECCCCeEEEEeC-------CE
Confidence 34557999999977 46889887652 222 12 3455422 123333 689999988 57
Q ss_pred EEEEeCCCCeE-EEccC--CCCC--CcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEE-----cc-CCC-CCC
Q psy10286 573 VECYEPDKDQW-RIVKS--MQKH--RSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTS-----VK-PML-TKR 640 (748)
Q Consensus 573 ~~~yd~~~~~W-~~~~~--~~~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~~-~~p-~~r 640 (748)
.|+|+..+-.- +.+.. +|.. ...++....++++|+|-|. ..|+||..+++-.. +. ..+ .+.
T Consensus 75 yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~-------~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~ 147 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR-------RLWRFDVKAQMVDPRSASEVDRMFPGVPL 147 (195)
T ss_dssp EEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT-------EEEEEETTTTEECGGGCEEHHHHSTTSCS
T ss_pred EEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC-------EEEEEeCCcccccCCCccChhhcCCCCCC
Confidence 88888543111 11222 2221 2233333237899999874 78999987764211 11 111 122
Q ss_pred cceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc
Q psy10286 641 CRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE 676 (748)
Q Consensus 641 ~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 676 (748)
.-.++...++.+|++-| +..|.||..+..
T Consensus 148 ~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~ 176 (195)
T 1itv_A 148 DTHDVFQFREKAYFCQD-------RFYWRVSSRSEL 176 (195)
T ss_dssp SCSEEEEETTEEEEEET-------TEEEEEECCTTC
T ss_pred CCCEEEEeCCeEEEEeC-------CEEEEEECCccE
Confidence 33455566899999988 578899987765
No 224
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.42 E-value=0.61 Score=49.58 Aligned_cols=173 Identities=12% Similarity=0.177 Sum_probs=101.9
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEc--cCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCe---
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKV--SPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQ--- 582 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~--~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--- 582 (748)
++++|+|-| +..|+||..+++.... +.+| . --++...+|++|.|-| +..++||+.+.+
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~ 220 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQG-------NQFLRFNPVSGEVPP 220 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEET-------TEEEEECTTTCCCCT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEEC-------CEEEEEcCccCcccC
Confidence 678899887 4789999998876532 2233 2 2355556899999988 577888876543
Q ss_pred ---------EEEccCCC------------------CCC-cceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEE--
Q psy10286 583 ---------WRIVKSMQ------------------KHR-SAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWT-- 631 (748)
Q Consensus 583 ---------W~~~~~~~------------------~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-- 631 (748)
|-.++... .+. ..-+++. .+|++|+|-|. ..|++|...+.+.
T Consensus 221 gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~-------~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 221 GYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS-------HYWRLDTNRDGWHSW 293 (460)
T ss_dssp TCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT-------EEEECTTGGGCCCCE
T ss_pred CCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC-------EEEEEecCCCCcCcc
Confidence 21111100 011 1223333 47899999884 5777776543332
Q ss_pred Ec----cCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccC----------CCCC--CcceEEEE-
Q psy10286 632 SV----KPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIAS----------MNVM--RSRVALVA- 694 (748)
Q Consensus 632 ~~----~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~----------~p~~--r~~~~~~~- 694 (748)
.+ +.+|.. --++...++++|++=| +.+|+|+..+. .+.+.. +|.. ...-.++.
T Consensus 294 ~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~ 363 (460)
T 1qhu_A 294 PIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFV 363 (460)
T ss_dssp EGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEEC
T ss_pred chhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEE
Confidence 12 123322 3344456899999977 57899986531 222211 2222 11223333
Q ss_pred --ECCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 695 --NMGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 695 --~~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
.++++|+|-| +..|.||...
T Consensus 364 ~~~~~ktyfFkG-------~~ywryd~~~ 385 (460)
T 1qhu_A 364 CPGSSRLHIMAG-------RRLWWLDLKS 385 (460)
T ss_dssp CTTCCEEEEEET-------TEEEEEEGGG
T ss_pred eCCCCEEEEEEC-------CEEEEEECCC
Confidence 2689999987 4688998764
No 225
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.41 E-value=2.6 Score=42.50 Aligned_cols=213 Identities=14% Similarity=0.089 Sum_probs=119.8
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCC----CeEEEc-c-CCCCCcce
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVR----RVWNKV-S-PMCFKRSA 548 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t----~~W~~~-~-~~~~~r~~ 548 (748)
+.+..+|+.+.....+-+ ....-++++.. ++.||+.... ...++++|+.+ .....+ + .+..+
T Consensus 10 ~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~p--- 79 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP--- 79 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC---
T ss_pred CeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCCCc---
Confidence 467888888877655422 22333555554 6789998642 35789999876 222222 1 22222
Q ss_pred eEEEE--ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc--CCCCCCcceEEEE--ECCEEEEEccCCCCcccCeEEE
Q psy10286 549 VGAAA--LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK--SMQKHRSAGGVIA--FDSYVYALGGHDGLSIFDSVER 622 (748)
Q Consensus 549 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~ 622 (748)
.++++ .+++||+.-.. .+.++++|+....-..+. .+..| .++++ .++.||+..... ...+++
T Consensus 80 ~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~----~~~I~~ 147 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT----PAKIKK 147 (316)
T ss_dssp CEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS----SCEEEE
T ss_pred CEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC----CCeEEE
Confidence 34444 37899998442 357889998765433332 22222 23444 378999876321 257999
Q ss_pred EECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCC-CCCcceEEEEECCEE
Q psy10286 623 YDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMN-VMRSRVALVANMGKL 699 (748)
Q Consensus 623 yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~l 699 (748)
+++....-+.+..... ..-.+++.- +++||+.-.. .+.|+.+|.....-..+.... ....-.++++.++.|
T Consensus 148 ~~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~l 221 (316)
T 1ijq_A 148 GGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKV 221 (316)
T ss_dssp EETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEE
T ss_pred EcCCCCCeEEEEECCC-CCceEEEEeccCCEEEEEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEE
Confidence 9987654443322111 222344443 6899998643 368999998754333332211 112235666678999
Q ss_pred EEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 700 WAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 700 ~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
|+.-.. ...|.++|+.++
T Consensus 222 y~~d~~-----~~~V~~~~~~~g 239 (316)
T 1ijq_A 222 FWTDII-----NEAIFSANRLTG 239 (316)
T ss_dssp EEEETT-----TTEEEEEETTTC
T ss_pred EEEECC-----CCeEEEEeCCCC
Confidence 997531 246777776544
No 226
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.39 E-value=0.013 Score=50.15 Aligned_cols=91 Identities=14% Similarity=0.251 Sum_probs=61.9
Q ss_pred ccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccccccccccccccccceeeeecC
Q psy10286 75 CDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQG 154 (748)
Q Consensus 75 ~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 154 (748)
.=|+|.|+|+.|..-+..|.... ..||.. .+.. . .......++-+ +
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p---~S~L~~--~~~~---~-------------------------~~~~~~g~~Fi-D 58 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYP---DTLLGS--TEKE---F-------------------------FFNEDTKEYFF-D 58 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTST---TSSTTS--SGGG---G-------------------------TBCSSSCSEEE-C
T ss_pred CEEEEEeCCEEEEEeHHHHhcCC---Cceecc--cCCc---c-------------------------cccCCCCcEEE-c
Confidence 35788899999999998886432 223332 0000 0 00112233333 4
Q ss_pred CCHHHHHHHHHhhhceeEEeech-hHHHHHHHHHHhcchhHH-HHHH
Q psy10286 155 IDAVAMEALINFVYSGRVTIHSQ-NVQSLMVVASFLQMQKVA-DACA 199 (748)
Q Consensus 155 ~~~~~~~~~l~flYtg~~~i~~~-~v~~ll~~A~~l~i~~l~-~~c~ 199 (748)
=++..|+.+|+|+-+|++.+..+ .+..+++-|++|+|+.+. +.|+
T Consensus 59 Rdp~~F~~ILnflR~G~l~~p~~~~~~~l~~Ea~fy~i~~l~l~~cC 105 (124)
T 1s1g_A 59 RDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCC 105 (124)
T ss_dssp SCHHHHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHTTCCGGGBCHHH
T ss_pred CChHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCChHHHHHHH
Confidence 59999999999999999987665 588899999999999874 5543
No 227
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.36 E-value=0.56 Score=53.49 Aligned_cols=242 Identities=13% Similarity=0.021 Sum_probs=126.2
Q ss_pred cceEEEEeCCCCceEEccCCCc---cc-ceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCccee
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSM---LR-SRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAV 549 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~---~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~ 549 (748)
...+|+.+...+.|+.+...+. .. .......+ +|+..+++...++.....++++|..+++......++.... .
T Consensus 93 ~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~-~ 171 (695)
T 2bkl_A 93 KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKY-A 171 (695)
T ss_dssp SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTT-C
T ss_pred EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccc-c
Confidence 4567888877778887754332 11 11222222 6666565443333334689999999987531111222211 2
Q ss_pred EEEE-ECCEEEEEeCCCCC--------CCCceEEEEeCCCCeE--EEccCCCCC-CcceEEEE-ECCEEEEEccCCCCcc
Q psy10286 550 GAAA-LNDKLYVCGGYDGV--------SSLNTVECYEPDKDQW--RIVKSMQKH-RSAGGVIA-FDSYVYALGGHDGLSI 616 (748)
Q Consensus 550 ~~~~-~~~~iyv~GG~~~~--------~~~~~~~~yd~~~~~W--~~~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~ 616 (748)
+.+. -+|+.++++..+.. .....++.++..+..- ..+...+.. ....+... -+|+..+++..++. .
T Consensus 172 ~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~ 250 (695)
T 2bkl_A 172 TPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW-S 250 (695)
T ss_dssp CCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-T
T ss_pred ceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-C
Confidence 2223 26666666654432 1245688999887652 222222221 22222222 25544444433221 2
Q ss_pred cCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc---EEEccCCCCCCcceEEE
Q psy10286 617 FDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE---WKMIASMNVMRSRVALV 693 (748)
Q Consensus 617 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~~~~ 693 (748)
...++.+|..+..|..+..-.. .....+..+|.+|+....+ .....++.+|..+.. |+.+-.......-..+.
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~--~~~~~~~~~g~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~ 326 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVG--AKYEVHAWKDRFYVLTDEG--APRQRVFEVDPAKPARASWKEIVPEDSSASLLSVS 326 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSS--CCEEEEEETTEEEEEECTT--CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCC--ceEEEEecCCcEEEEECCC--CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEE
Confidence 4578888877778887753222 1222233566666554332 224689999987654 88764322122222334
Q ss_pred EECCEEEEEeCCCCCCCCCeEEEEeCCCCceEe
Q psy10286 694 ANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 694 ~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (748)
..++++++.+..++. ..++++|+....-+.
T Consensus 327 ~~~~~lv~~~~~dg~---~~l~~~~~~g~~~~~ 356 (695)
T 2bkl_A 327 IVGGHLSLEYLKDAT---SEVRVATLKGKPVRT 356 (695)
T ss_dssp EETTEEEEEEEETTE---EEEEEEETTCCEEEE
T ss_pred EECCEEEEEEEECCE---EEEEEEeCCCCeeEE
Confidence 458888888765432 467888876544333
No 228
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.35 E-value=1.9 Score=42.83 Aligned_cols=222 Identities=12% Similarity=0.129 Sum_probs=105.9
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 554 (748)
+.+..+|..+++....-.+........++.. +++.++.|+.+ ..+..||..+++-...-.-... ...+...
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~~~~~~~~h~~--~~~~~~~ 117 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSHSA--RVGSLSW 117 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSS--CEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCceeEEEecCccc--eEEEeec
Confidence 4688889988876654333322222222222 66777888854 4688899988864332221221 2233444
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceE-EEEECCEEEEEccCCCCcccCeEEEEECCCCcEE--
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGG-VIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWT-- 631 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-- 631 (748)
++.+.+.|+.+ ..+..++..+................. ....++..++.|+.++ .+..||..+.+-.
T Consensus 118 ~~~~l~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~ 187 (318)
T 4ggc_A 118 NSYILSSGSRS-----GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPGEGGWV 187 (318)
T ss_dssp ETTEEEEEETT-----SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCBTTBSC
T ss_pred CCCEEEEEecC-----CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc-----ceeEEECCCCccccc
Confidence 56666666643 234445544433222111111111111 2222556666676643 4778887764311
Q ss_pred EccCCCCCCcc-eeEEEE--CCE-EEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCC
Q psy10286 632 SVKPMLTKRCR-LGVAAL--NNK-IYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDG 707 (748)
Q Consensus 632 ~~~~~p~~r~~-~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~ 707 (748)
........... .+.+.. ++. +.+.+|.. ...+..+|.....-..................++.+++.+|..+
T Consensus 188 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d 263 (318)
T 4ggc_A 188 PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS----DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ 263 (318)
T ss_dssp CSEEECCCCSCEEEEEECTTSTTEEEEEECTT----TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTT
T ss_pred ceeeecccCCceEEEEecCCCCcEEEEEecCC----CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCC
Confidence 11111111111 112221 233 33344422 24677888877665444322222222222223566666655432
Q ss_pred CCCCCeEEEEeCCCCc
Q psy10286 708 VSNLPTVEVYDPSTDS 723 (748)
Q Consensus 708 ~~~~~~v~~yd~~~~~ 723 (748)
..+.+||..+++
T Consensus 264 ----~~i~iwd~~~~~ 275 (318)
T 4ggc_A 264 ----NQLVIWKYPTMA 275 (318)
T ss_dssp ----CCEEEEETTTCC
T ss_pred ----CEEEEEECCCCc
Confidence 358899987654
No 229
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.34 E-value=1.3 Score=45.98 Aligned_cols=192 Identities=12% Similarity=0.054 Sum_probs=95.9
Q ss_pred EEEEEccCCCCCCCCeEEEEECCCCe------EEEccCCCCC---cceeEEEEE-----CCEE-EEEeCCCCCCCCceEE
Q psy10286 510 RLYAFGGYNGSERLSTVEEFDPVRRV------WNKVSPMCFK---RSAVGAAAL-----NDKL-YVCGGYDGVSSLNTVE 574 (748)
Q Consensus 510 ~iyv~GG~~~~~~~~~v~~yd~~t~~------W~~~~~~~~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~~~ 574 (748)
..++.|+.+ ..+..||..+.+ +..+...+.. ..-.+++.. ++.. ++.|+.+ ..+.
T Consensus 82 ~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~ 151 (397)
T 1sq9_A 82 CLVATTSFS-----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTY 151 (397)
T ss_dssp EEEEEEETT-----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEE
T ss_pred cEEEEEcCC-----CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEE
Confidence 777777754 357777777665 6665443211 222233333 4555 7777754 3566
Q ss_pred EEeCCC------Ce---EEEccCC--------CCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCC
Q psy10286 575 CYEPDK------DQ---WRIVKSM--------QKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPM 636 (748)
Q Consensus 575 ~yd~~~------~~---W~~~~~~--------~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 636 (748)
.||..+ .. |.....+ .....-.+++.. ++ +++.|+.+ ..+..||..+.+....-..
T Consensus 152 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 152 IWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPLYNFES 225 (397)
T ss_dssp EEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEEEEEEC
T ss_pred EEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCceeEEEec
Confidence 777655 21 1110011 111112233333 56 66777654 3688999987654332111
Q ss_pred -CCC---CcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEE-ccCCCC----------CCcceEEEEE--CC
Q psy10286 637 -LTK---RCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-IASMNV----------MRSRVALVAN--MG 697 (748)
Q Consensus 637 -p~~---r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~----------~r~~~~~~~~--~~ 697 (748)
... ......+.+ ++.+++.|+.++. ...+.+||..+.+-.. +...+. .......+.. ++
T Consensus 226 ~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 226 QHSMINNSNSIRSVKFSPQGSLLAIAHDSNS--FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp CC---CCCCCEEEEEECSSTTEEEEEEEETT--EEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred cccccccCCccceEEECCCCCEEEEEecCCC--CceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 001 222223333 5667777764311 1478999987764322 211000 1222222333 57
Q ss_pred EEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 698 KLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 698 ~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
++++.|+.+ ..+.+||..+.+-
T Consensus 304 ~~l~~~~~d-----g~i~iwd~~~~~~ 325 (397)
T 1sq9_A 304 ETLCSAGWD-----GKLRFWDVKTKER 325 (397)
T ss_dssp SEEEEEETT-----SEEEEEETTTTEE
T ss_pred CEEEEEeCC-----CeEEEEEcCCCce
Confidence 777777744 3689999877643
No 230
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=95.31 E-value=1.6 Score=41.02 Aligned_cols=144 Identities=11% Similarity=0.142 Sum_probs=83.8
Q ss_pred EEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEE--Ec----cCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEE
Q psy10286 550 GAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWR--IV----KSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVE 621 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~--~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 621 (748)
+++..+|++|+|=| ..+|+++.....+. .+ +.+|. ... ++... ++++|+|-|. .+|
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG~-------~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRGR-------KFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEETT-------EEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEccC-------EEE
Confidence 44457999999987 46778776554432 12 23442 222 23333 6899999884 688
Q ss_pred EEECCCCcE---EEccC--CCCCCcceeEEEE---CCEEEEEeccCCCccccEEEEEeCCCCcEEE-----c----cCCC
Q psy10286 622 RYDPKTDEW---TSVKP--MLTKRCRLGVAAL---NNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-----I----ASMN 684 (748)
Q Consensus 622 ~yd~~~~~W---~~~~~--~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p 684 (748)
+|+..+-.- ..+.. +|..-...-++.. ++++|++-| +..|+||..+++-.. + +.+|
T Consensus 92 ~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp EESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCC
Confidence 887432211 22322 2221112333333 489999987 688999987653211 1 1122
Q ss_pred CCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 685 VMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 685 ~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
..--++...++++|+|-| +..+.||..+++=.
T Consensus 165 --~~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 165 --DKVDAVYEKNGYIYFFNG-------PIQFEYSIWSNRIV 196 (207)
T ss_dssp --SCCSEEEEETTEEEEEET-------TEEEEEETTTTEEE
T ss_pred --CCccEEEEcCCcEEEEEC-------CEEEEEeCCccEEe
Confidence 112334456999999977 46899998776543
No 231
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.28 E-value=0.54 Score=49.29 Aligned_cols=189 Identities=17% Similarity=0.102 Sum_probs=94.4
Q ss_pred cceEEEEeCCCCceEE-----ccCCCcccce-eEEEEE-CC-EEEEEccCCCCCCCCeEEEEECCCCeEEEccC-CCCCc
Q psy10286 476 LSTVEVFDPLVGRWQM-----AEAMSMLRSR-VGVAVM-KN-RLYAFGGYNGSERLSTVEEFDPVRRVWNKVSP-MCFKR 546 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~-----~~~~~~~r~~-~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~-~~~~r 546 (748)
-..+..||..++.... +..+...... .+++.. ++ .+++.|+.+ ..+..||..+++....-. .....
T Consensus 103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~ 177 (402)
T 2aq5_A 103 DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-----NVILVWDVGTGAAVLTLGPDVHPD 177 (402)
T ss_dssp TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-----SCEEEEETTTTEEEEEECTTTCCS
T ss_pred CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-----CEEEEEECCCCCccEEEecCCCCC
Confidence 3568888887764321 1111111111 222222 33 577777754 358899999886543321 11122
Q ss_pred ceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc-CC-CCCCcceEEEEECCEEEEEccCCCCcccCeEEEE
Q psy10286 547 SAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK-SM-QKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERY 623 (748)
Q Consensus 547 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~-~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y 623 (748)
.-.+++.. ++..++.|+.+ ..+..||+.+.+-...- .. ...+....+..-++.+++.|.... ....+..|
T Consensus 178 ~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~d~~i~iw 250 (402)
T 2aq5_A 178 TIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM--SERQVALW 250 (402)
T ss_dssp CEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTT--CCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCC--CCceEEEE
Confidence 22233333 67777777754 47899999887643322 11 111122222333678777772110 02468899
Q ss_pred ECCCCcE-EEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCc--EEEcc
Q psy10286 624 DPKTDEW-TSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDE--WKMIA 681 (748)
Q Consensus 624 d~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 681 (748)
|..+..- .............+++.. +..+++.|+.+ ..+.+||..+.+ ...+.
T Consensus 251 d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d-----g~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 251 DTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD-----SSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp ETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC-----SCEEEEEECSSTTCEEEEE
T ss_pred cCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC-----CeEEEEEecCCCcceEeec
Confidence 9876431 011111111222223322 34566667543 367888887765 44443
No 232
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.23 E-value=1.8 Score=42.97 Aligned_cols=222 Identities=13% Similarity=0.063 Sum_probs=116.6
Q ss_pred cEEEEEcCccCCCCCCcceEeecCCCCceeecccc-cccceE-EecccccccCCCccceEEEEeCCCCceEEccCCCccc
Q psy10286 422 GHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEEE-TLSNAV-ISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSMLR 499 (748)
Q Consensus 422 ~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~-~~~~~~-~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r 499 (748)
+.+|+++... ..+..||+.++ ....... .....+ +..++.++........+..||+.+++...+.......
T Consensus 40 ~~l~~~~~~~------~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 112 (296)
T 3e5z_A 40 SAVIFSDVRQ------NRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGK 112 (296)
T ss_dssp TEEEEEEGGG------TEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTE
T ss_pred CEEEEEeCCC------CEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCC
Confidence 3477776542 25888999887 5544321 112222 2334444444333467999999888877654321111
Q ss_pred ---ceeEEEEE-CCEEEEE----ccCC--------CCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEe
Q psy10286 500 ---SRVGVAVM-KNRLYAF----GGYN--------GSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCG 562 (748)
Q Consensus 500 ---~~~~~~~~-~~~iyv~----GG~~--------~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~G 562 (748)
.-..++.. +|.+|+. |... .......+++||+. ++...+..-. ....+.+.. ++++++.+
T Consensus 113 ~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~~~~gi~~s~dg~~lv~~ 189 (296)
T 3e5z_A 113 KLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR--VKPNGLAFLPSGNLLVSD 189 (296)
T ss_dssp ECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC--SSEEEEEECTTSCEEEEE
T ss_pred CCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC--CCCccEEECCCCCEEEEe
Confidence 11122232 7789986 4311 01123579999988 5544432211 111233333 66666444
Q ss_pred CCCCCCCCceEEEEeCC-CCeE-EE--ccCCCCCCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCC
Q psy10286 563 GYDGVSSLNTVECYEPD-KDQW-RI--VKSMQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPML 637 (748)
Q Consensus 563 G~~~~~~~~~~~~yd~~-~~~W-~~--~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 637 (748)
.. ...+++||+. +++. .. .-......- .+++. -+|.||+..+ +.+.+||+.......+. .+
T Consensus 190 ~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p-~~i~~d~~G~l~v~~~-------~~v~~~~~~g~~~~~~~-~~ 255 (296)
T 3e5z_A 190 TG-----DNATHRYCLNARGETEYQGVHFTVEPGKT-DGLRVDAGGLIWASAG-------DGVHVLTPDGDELGRVL-TP 255 (296)
T ss_dssp TT-----TTEEEEEEECSSSCEEEEEEEECCSSSCC-CSEEEBTTSCEEEEET-------TEEEEECTTSCEEEEEE-CS
T ss_pred CC-----CCeEEEEEECCCCcCcCCCeEeeCCCCCC-CeEEECCCCCEEEEcC-------CeEEEECCCCCEEEEEE-CC
Confidence 32 2578899876 4444 11 111111111 12333 3778888762 46999999865544443 22
Q ss_pred CCCcceeEEEE---C-CEEEEEeccCCCccccEEEEEeCCCCcE
Q psy10286 638 TKRCRLGVAAL---N-NKIYVCGGYDGAIFLQSVEMYDPITDEW 677 (748)
Q Consensus 638 ~~r~~~~~~~~---~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W 677 (748)
.. ...+.+ + +.||+... +.++.|++++++-
T Consensus 256 ~~---~~~~~f~~~d~~~L~v~t~-------~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 256 QT---TSNLCFGGPEGRTLYMTVS-------TEFWSIETNVRGL 289 (296)
T ss_dssp SC---CCEEEEESTTSCEEEEEET-------TEEEEEECSCCBC
T ss_pred CC---ceeEEEECCCCCEEEEEcC-------CeEEEEEcccccc
Confidence 22 222333 2 35777653 4799999987653
No 233
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.21 E-value=2.7 Score=42.65 Aligned_cols=188 Identities=8% Similarity=0.022 Sum_probs=91.3
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEc-cCCCCCcce-eEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKV-SPMCFKRSA-VGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWR 584 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~-~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 584 (748)
++.+++.|+.+ ..+..||..+.+-... ..+...... .+++.. ++..++.||.+ ..+..||..+.+-.
T Consensus 127 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~ 196 (366)
T 3k26_A 127 DPNLLLSVSKD-----HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSKRMM 196 (366)
T ss_dssp CTTEEEEEETT-----SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSHHHH
T ss_pred CCCEEEEEeCC-----CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCCccc
Confidence 55677777754 3688899988764433 211212222 223332 56677777754 36788888765311
Q ss_pred Ec-c-------------------------CCC-CCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcE-------
Q psy10286 585 IV-K-------------------------SMQ-KHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEW------- 630 (748)
Q Consensus 585 ~~-~-------------------------~~~-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W------- 630 (748)
.. . ... ....-.++... +.+++.|+.+ ..+..||..+..=
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~ 270 (366)
T 3k26_A 197 NAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCE-----NAIVCWKPGKMEDDIDKIKP 270 (366)
T ss_dssp HHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSS-----SEEEEEEESSTTCCGGGCCT
T ss_pred cccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecC-----CEEEEEeCCCcccccccccc
Confidence 00 0 000 11111222233 5566666653 3577787655321
Q ss_pred -----EEccCCC--CCCcceeEEEEC--CEEEEEeccCCCccccEEEEEeCCCCcEE--EccCCCCC--CcceEEEEE--
Q psy10286 631 -----TSVKPML--TKRCRLGVAALN--NKIYVCGGYDGAIFLQSVEMYDPITDEWK--MIASMNVM--RSRVALVAN-- 695 (748)
Q Consensus 631 -----~~~~~~p--~~r~~~~~~~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~~W~--~~~~~p~~--r~~~~~~~~-- 695 (748)
..+..+. ...........+ +.+++.|+.+ ..+.+||..+.+-. .+..+... ......+..
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 345 (366)
T 3k26_A 271 SESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV-----GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR 345 (366)
T ss_dssp TCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT-----SCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECT
T ss_pred CCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC-----CcEEEEECCCCCCccccceEEcccccCCceEEEEeCC
Confidence 1111111 111111122234 7778888754 36888998775311 11112211 112222222
Q ss_pred CCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 696 MGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 696 ~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
++++++.||.++ .+.+||+.+
T Consensus 346 ~~~~l~s~~~dg-----~i~iwd~~~ 366 (366)
T 3k26_A 346 DSSILIAVCDDA-----SIWRWDRLR 366 (366)
T ss_dssp TSSEEEEEETTS-----EEEEEEC--
T ss_pred CCCeEEEEeCCC-----EEEEEEecC
Confidence 677888887543 688888753
No 234
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.10 E-value=0.4 Score=49.30 Aligned_cols=191 Identities=15% Similarity=0.082 Sum_probs=95.0
Q ss_pred EEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccC--C-CCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCC
Q psy10286 505 AVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSP--M-CFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDK 580 (748)
Q Consensus 505 ~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~--~-~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 580 (748)
+...+..++.|+.+ ..+..||..+++-..... + .....-.+++.. +++.++.|+.+ ..+..||..+
T Consensus 89 ~~s~d~~l~~~s~d-----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-----~~i~iwd~~~ 158 (344)
T 4gqb_B 89 TWVGERGILVASDS-----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-----ICIKVWDLAQ 158 (344)
T ss_dssp EEETTTEEEEEETT-----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTT
T ss_pred EEeCCCeEEEEECC-----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCC
Confidence 33344445566643 367888887764211110 0 111111223322 67777888765 3688899888
Q ss_pred CeEEEccCCCCCCcc-eEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE---CCEEEE
Q psy10286 581 DQWRIVKSMQKHRSA-GGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL---NNKIYV 654 (748)
Q Consensus 581 ~~W~~~~~~~~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v 654 (748)
++-... +...... .+++.. +..+++.|+.++ .+..||..+.+-...-..........++.+ ++++++
T Consensus 159 ~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 159 QVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSEDN-----RILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp TEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEE
T ss_pred CcEEEE--EcCcCCceEEEEecCCCCCceeeecccc-----ccccccccccceeeeeecceeeccceeeeecCCCCcceE
Confidence 753222 2211111 122222 335777787654 588899887654332111111112222222 466888
Q ss_pred EeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--C-CEEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 655 CGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--M-GKLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 655 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
.|+.+ ..|.+||..+.+ .+..+.........+.+ + .++++.|+.++ .|.+||..+++-
T Consensus 232 sg~~d-----g~v~~wd~~~~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~-----~i~vwd~~~~~~ 292 (344)
T 4gqb_B 232 FGDEN-----GTVSLVDTKSTS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC-----SLAVLDSSLSEL 292 (344)
T ss_dssp EEETT-----SEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTS-----CEEEECTTCCEE
T ss_pred EeccC-----CcEEEEECCCCc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC-----eEEEEECCCCcE
Confidence 88764 368889987643 22222211222222333 3 35667777543 578888777653
No 235
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=95.08 E-value=0.0081 Score=49.79 Aligned_cols=89 Identities=12% Similarity=0.229 Sum_probs=60.3
Q ss_pred EEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccccccccccccccccceeeeecCCC
Q psy10286 77 VTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQGID 156 (748)
Q Consensus 77 v~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 156 (748)
|+|.|+|+.|...+..|..... .||... +.. . .......++-+ +=+
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~--~~~--~--------------------------~~~~~~~~~Fi-DRd 47 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSS--ERD--F--------------------------FYHPETQQYFF-DRD 47 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSG--GGG--G--------------------------GEEGGGTEEEE-CSC
T ss_pred EEEEECCEEEEEeHHHHhcCCC---cccccc--CCc--c--------------------------cccCCCCcEEE-eCC
Confidence 7899999999999988864321 233320 000 0 00112233333 459
Q ss_pred HHHHHHHHHhhhceeEEeech-hHHHHHHHHHHhcchhHH-HHHH
Q psy10286 157 AVAMEALINFVYSGRVTIHSQ-NVQSLMVVASFLQMQKVA-DACA 199 (748)
Q Consensus 157 ~~~~~~~l~flYtg~~~i~~~-~v~~ll~~A~~l~i~~l~-~~c~ 199 (748)
+..|+.+|+|+-+|++.++.+ .+..+++-|++|+|+.+. +.|+
T Consensus 48 p~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 48 PDIFRHILNFYRTGKLHYPRHECISAYDEELAFFGLIPEIIGDCC 92 (105)
T ss_dssp TTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHHTCCSCCBCHHH
T ss_pred cHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999987655 478899999999999873 4443
No 236
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=95.07 E-value=3 Score=42.16 Aligned_cols=222 Identities=13% Similarity=-0.032 Sum_probs=110.3
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCE-EEEEccC-----------------CCC----CCCCeEEEEECCC
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNR-LYAFGGY-----------------NGS----ERLSTVEEFDPVR 533 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~-iyv~GG~-----------------~~~----~~~~~v~~yd~~t 533 (748)
..+|.+|..+++...+...+. ..+.+.. +++ |++.... ++. .....++.+|+.+
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred ceEEEEECCCCceEEEEcCCC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 468999998887776654332 2222222 554 4444321 000 1135799999999
Q ss_pred CeE-EEccCCCCCcceeEEEEE-CCEEEEEeCCCCCC---C-CceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEE
Q psy10286 534 RVW-NKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVS---S-LNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYA 607 (748)
Q Consensus 534 ~~W-~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~---~-~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv 607 (748)
++. ..+.. + .....+.. +| +++.+..++.. . ...++.+| ++++..+..- .......-+|+.++
T Consensus 162 ~~~~~~l~~-~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~ 230 (347)
T 2gop_A 162 EEVIEEFEK-P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERIL 230 (347)
T ss_dssp TEEEEEEEE-E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEE
T ss_pred CeEEeeecC-C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCEEE
Confidence 887 55554 3 22233333 55 55555443221 1 45788888 7777666432 11222244554343
Q ss_pred EccCCC---CcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCC
Q psy10286 608 LGGHDG---LSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMN 684 (748)
Q Consensus 608 ~GG~~~---~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 684 (748)
+++... ......++.+| +.++..+..-.. ........+.+.+|+.++.++ ...+| ++ +.+...+...
T Consensus 231 ~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~-~~~~~~~~~sdg~~~~~~~~~---~~~l~-~~--~g~~~~~~~~- 300 (347)
T 2gop_A 231 LYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVD-RGVGQAKIKDGKVYFTLFEEG---SVNLY-IW--DGEIKPIAKG- 300 (347)
T ss_dssp EEECCSSSCCCSSCEEEEEC--SSCEEESSTTCC-SEEEEEEEETTEEEEEEEETT---EEEEE-EE--SSSEEEEECS-
T ss_pred EEEccccCCccccceEEEEC--CCceEeccccCC-cccCCccEEcCcEEEEEecCC---cEEEE-Ec--CCceEEEecC-
Confidence 433221 12345799999 667776643211 111111223234777766544 34677 77 3444444221
Q ss_pred CCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceEecCC
Q psy10286 685 VMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFVAP 729 (748)
Q Consensus 685 ~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 729 (748)
.....++.... .+++.++..+ ....+|.+| ++.+.+..
T Consensus 301 -~~~v~~~~~s~-~~~~~~~~~~--~~~~l~~~~---g~~~~lt~ 338 (347)
T 2gop_A 301 -RHWIMGFDVDE-IVVYLKETAT--RLRELFTWD---GEEKQLTD 338 (347)
T ss_dssp -SSEEEEEEESS-SEEEEEECSS--SCCEEEEES---SSEEECCC
T ss_pred -CCeEEeeeeeC-cEEEEEcCCC--ChHHheEeC---CcEEEecc
Confidence 22222222234 5555554332 223788887 45555543
No 237
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.05 E-value=1.7 Score=43.09 Aligned_cols=215 Identities=12% Similarity=0.104 Sum_probs=99.3
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCe-EEEccCCCCCcceeEEEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRV-WNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~r~~~~~~~~ 554 (748)
..+..||..++.-...-... ...-.+++.. ++..++.|+.++ .+..||..... ...+..+............
T Consensus 39 g~v~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg-----~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (313)
T 3odt_A 39 GTVRLWSKDDQWLGTVVYTG-QGFLNSVCYDSEKELLLFGGKDT-----MINGVPLFATSGEDPLYTLIGHQGNVCSLSF 112 (313)
T ss_dssp SEEEEEEESSSEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTS-----CEEEEETTCCTTSCC-CEECCCSSCEEEEEE
T ss_pred CcEEEEECCCCEEEEEeecC-CccEEEEEECCCCCEEEEecCCC-----eEEEEEeeecCCCCcccchhhcccCEEEEEe
Confidence 46778887665433221111 1111223333 666777777543 45666654421 1111111111222233333
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEE-E-CCEEEEEccCCCCcccCeEEEEECCCCcEEE
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIA-F-DSYVYALGGHDGLSIFDSVERYDPKTDEWTS 632 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 632 (748)
++..++.|+.+ ..+..||.....+.... .. ..-.++.. - ++..++.|+.++ .+..||.....- .
T Consensus 113 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~-~~--~~v~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~-~ 178 (313)
T 3odt_A 113 QDGVVISGSWD-----KTAKVWKEGSLVYNLQA-HN--ASVWDAKVVSFSENKFLTASADK-----TIKLWQNDKVIK-T 178 (313)
T ss_dssp ETTEEEEEETT-----SEEEEEETTEEEEEEEC-CS--SCEEEEEEEETTTTEEEEEETTS-----CEEEEETTEEEE-E
T ss_pred cCCEEEEEeCC-----CCEEEEcCCcEEEeccc-CC--CceeEEEEccCCCCEEEEEECCC-----CEEEEecCceEE-E
Confidence 56666777754 46777883322222221 11 11112222 2 566677777643 577888332221 1
Q ss_pred ccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcce-EEEEE-CCEEEEEeCCCCCCC
Q psy10286 633 VKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRV-ALVAN-MGKLWAIGGYDGVSN 710 (748)
Q Consensus 633 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~l~v~GG~~~~~~ 710 (748)
............+..-++. ++.|+.+ ..+.+||..+.+-... +....... +++.. +++ ++.||.+
T Consensus 179 ~~~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~-l~~~~~d---- 245 (313)
T 3odt_A 179 FSGIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGDVLRT--YEGHESFVYCIKLLPNGD-IVSCGED---- 245 (313)
T ss_dssp ECSSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSC-EEEEETT----
T ss_pred EeccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchhhhhh--hhcCCceEEEEEEecCCC-EEEEecC----
Confidence 2111111222222233667 6677654 4788999877643221 11111222 22232 444 5566643
Q ss_pred CCeEEEEeCCCCceE
Q psy10286 711 LPTVEVYDPSTDSWA 725 (748)
Q Consensus 711 ~~~v~~yd~~~~~W~ 725 (748)
..+.+||..+++..
T Consensus 246 -g~v~iwd~~~~~~~ 259 (313)
T 3odt_A 246 -RTVRIWSKENGSLK 259 (313)
T ss_dssp -SEEEEECTTTCCEE
T ss_pred -CEEEEEECCCCcee
Confidence 36888988877644
No 238
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.04 E-value=0.16 Score=62.50 Aligned_cols=248 Identities=10% Similarity=0.120 Sum_probs=119.7
Q ss_pred ceEeecCCCCceeecc-c--ccccceEEecccccccCCCccceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEc
Q psy10286 439 TVEVFDPLVGRWQMAE-E--ETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFG 515 (748)
Q Consensus 439 ~~~~y~~~~~~W~~~~-~--~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~G 515 (748)
.+..||..+++....- . ..+....+..++.....+..-..+..||..+++........ ..-.+++...+..++.|
T Consensus 984 ~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~l~~~ 1061 (1249)
T 3sfz_A 984 AIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQ--ETVKDFRLLQDSRLLSW 1061 (1249)
T ss_dssp CCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCS--SCEEEEEECSSSEEEEE
T ss_pred CEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCC--CcEEEEEEcCCCcEEEE
Confidence 4677777665543221 1 11222233333333333333457889999888776543222 12223333334445566
Q ss_pred cCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcc
Q psy10286 516 GYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSA 595 (748)
Q Consensus 516 G~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~ 595 (748)
+.+ ..+..||..+++-...-.-....-...+..-+++.++.|+.++ .+..||..+.. .+..+......
T Consensus 1062 ~~d-----g~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~-----~v~iwd~~~~~--~~~~l~~h~~~ 1129 (1249)
T 3sfz_A 1062 SFD-----GTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK-----TAKIWSFDLLS--PLHELKGHNGC 1129 (1249)
T ss_dssp ESS-----SEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS-----CCCEECSSSSS--CSBCCCCCSSC
T ss_pred ECC-----CcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCcc--eeeeeccCCCc
Confidence 643 3688899887653221111111111222223677777777653 46677776543 12222221111
Q ss_pred eEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEcc-CC------CCCCcceeEEEE--CCEEEEEeccCCCccc
Q psy10286 596 GGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVK-PM------LTKRCRLGVAAL--NNKIYVCGGYDGAIFL 664 (748)
Q Consensus 596 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~------p~~r~~~~~~~~--~~~i~v~GG~~~~~~~ 664 (748)
-.++.+ ++.+.+.|+.++ .+..||..+.+....- +. .........+.+ +++.++.||
T Consensus 1130 v~~~~~s~dg~~lat~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~------- 1197 (1249)
T 3sfz_A 1130 VRCSAFSLDGILLATGDDNG-----EIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG------- 1197 (1249)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES-------
T ss_pred EEEEEECCCCCEEEEEeCCC-----EEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC-------
Confidence 222222 677888887654 4677887765432211 10 111111222223 566666665
Q ss_pred cEEEEEeCCCCcEEEccCCCCCC--cceEEEEECCEEEEEeCCCCCCCCCeEEEEeC
Q psy10286 665 QSVEMYDPITDEWKMIASMNVMR--SRVALVANMGKLWAIGGYDGVSNLPTVEVYDP 719 (748)
Q Consensus 665 ~~v~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~ 719 (748)
..+.+||..+.+... .+.... .......-+++.++.|+.++ .+++|+.
T Consensus 1198 g~v~vwd~~~g~~~~--~~~~~~~~i~~~~~s~dg~~l~~~~~dg-----~v~vw~l 1247 (1249)
T 3sfz_A 1198 GYLKWWNVATGDSSQ--TFYTNGTNLKKIHVSPDFRTYVTVDNLG-----ILYILQV 1247 (1249)
T ss_dssp SSEEEBCSSSCBCCC--CCCCSSCCCCCCEECSSSCCEEEECTTC-----CEEEECC
T ss_pred CeEEEEECCCCceee--eeeccCCcccEEEECCCCCEEEEecCCc-----EEEEEee
Confidence 368889987764322 222111 11222233677777777543 4777765
No 239
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.03 E-value=3.3 Score=47.55 Aligned_cols=182 Identities=14% Similarity=0.143 Sum_probs=99.9
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK 587 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 587 (748)
++.|||-.. +.+.+||+.++++...... ....-.+.+..+|.||+... +.+++||+.+++++...
T Consensus 73 ~g~lWigT~-------~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~~~g~lWigt~-------~Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 73 NTYLYMGTD-------NGILVYNYRADRYEQPETD-FPTDVRTMALQGDTLWLGAL-------NGLYTYQLQSRKLTSFD 137 (758)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEECCCSCC-CCSCEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEC
T ss_pred CCcEEEEeC-------CCeEEEeCCCCEEECcccC-CCceEEEEEecCCcEEEEcC-------CcceeEeCCCCeEEEec
Confidence 678887432 3578999999987652111 11111233345888887432 36899999999887762
Q ss_pred ----CCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCC----CCcceeEEEE--CCEEEEEe
Q psy10286 588 ----SMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLT----KRCRLGVAAL--NNKIYVCG 656 (748)
Q Consensus 588 ----~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~----~r~~~~~~~~--~~~i~v~G 656 (748)
.++... -.+++.. ++.|++... ..+.+||+.+++++....... ...-.++..- ++.|||-.
T Consensus 138 ~~~~~l~~~~-i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt 209 (758)
T 3ott_A 138 TRRNGLPNNT-IYSIIRTKDNQIYVGTY-------NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT 209 (758)
T ss_dssp HHHHCCSCSC-EEEEEECTTCCEEEEET-------TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE
T ss_pred cCCCCcCCCe-EEEEEEcCCCCEEEEeC-------CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE
Confidence 122211 1222222 678887321 358899999998876532111 0111223332 24577632
Q ss_pred ccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCCceEec
Q psy10286 657 GYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 657 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (748)
. ..++.||+.++++.....++... -.+++.. +|.|+|-.. ..+.+||+.++.++.+
T Consensus 210 -~------~Gl~~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWigT~-------~Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 210 -E------GYLFQYFPSTGQIKQTEAFHNNS-IKSLALDGNGDLLAGTD-------NGLYVYHNDTTPLQHI 266 (758)
T ss_dssp -E------EEEEEEETTTTEEEEEEEEEEEE-EEEEEECTTCCEEEEET-------TEEEEECCTTSCCEEE
T ss_pred -C------CCCeEEcCCCCeEEeccCCCCCe-EEEEEEcCCCCEEEEeC-------CceeEEecCCCcEEEE
Confidence 1 25889999999887664332111 1122222 466766421 2366677766665543
No 240
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.99 E-value=4.1 Score=45.13 Aligned_cols=116 Identities=17% Similarity=0.264 Sum_probs=68.1
Q ss_pred EEEECCEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCCCC------cceeEEEEECCEEEEEeCCCCCCCCceEEE
Q psy10286 504 VAVMKNRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMCFK------RSAVGAAALNDKLYVCGGYDGVSSLNTVEC 575 (748)
Q Consensus 504 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 575 (748)
-++.++.||+.++. ..++.+|..|.+ |+.-...+.. ....+.++.+++||+... -..+..
T Consensus 64 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 64 AIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp CEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred cEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 35679999997653 248999988764 8875443221 011234567899987532 247899
Q ss_pred EeCCCCe--EEEccCCCCCC--cceEEEEECC------EEEEEccCC-CCcccCeEEEEECCCCc--EEE
Q psy10286 576 YEPDKDQ--WRIVKSMQKHR--SAGGVIAFDS------YVYALGGHD-GLSIFDSVERYDPKTDE--WTS 632 (748)
Q Consensus 576 yd~~~~~--W~~~~~~~~~r--~~~~~~~~~~------~iyv~GG~~-~~~~~~~~~~yd~~~~~--W~~ 632 (748)
+|..+.+ |+.-..-+... ...+-++.++ .+|+ |... .......++.||+.+.+ |+.
T Consensus 132 lD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 132 LNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeec
Confidence 9998775 87653221111 1122334455 6655 3321 11124579999998764 865
No 241
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.99 E-value=2.4 Score=44.14 Aligned_cols=188 Identities=15% Similarity=0.163 Sum_probs=95.5
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
+++.++.|+.+ ..+..||..+.+-...-.- ....-.+++.. ++..++.|+.+ ..+..||..+++....
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLT 202 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEEE
Confidence 66777778754 3688899988764332111 11112233332 56666677654 4688899988775433
Q ss_pred cCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEc-cCCC----CCCcceeEEEE--CCEEEEEec
Q psy10286 587 KSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSV-KPML----TKRCRLGVAAL--NNKIYVCGG 657 (748)
Q Consensus 587 ~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p----~~r~~~~~~~~--~~~i~v~GG 657 (748)
-.... .-.+++.. ++.+++.|+.++ .+..||..+..-... .... ........+.+ +++.++.|+
T Consensus 203 ~~~~~--~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 203 LSIED--GVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp EECSS--CEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEcCC--CcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 22211 11222222 677888888754 588899887654322 1110 11111222233 567777887
Q ss_pred cCCCccccEEEEEeCCCCcEEEccC----------CCCCCcc-eEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 658 YDGAIFLQSVEMYDPITDEWKMIAS----------MNVMRSR-VALVA-NMGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~W~~~~~----------~p~~r~~-~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
.+ ..+.+||..+..-..... +...... .+++. -+++.++.||.+ ..+.+||..++.
T Consensus 276 ~d-----~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D-----~~v~iwd~~~~~ 343 (393)
T 1erj_A 276 LD-----RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD-----RGVLFWDKKSGN 343 (393)
T ss_dssp TT-----SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT-----SEEEEEETTTCC
T ss_pred CC-----CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCe
Confidence 65 367788876532211000 0000011 11222 256667777744 368888887764
No 242
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.94 E-value=4.2 Score=42.32 Aligned_cols=212 Identities=11% Similarity=0.090 Sum_probs=120.4
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccC--CCCCcceeEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSP--MCFKRSAVGAA 552 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~--~~~~r~~~~~~ 552 (748)
+.+..+++.......+... ...-.+++.. ++.||+.-- ....++++++.....+.+.. +..+ .+.+
T Consensus 96 ~~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p---~gla 165 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP---GGLA 165 (386)
T ss_dssp SCEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCEEEEECSSCSCC---CCEE
T ss_pred ccceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeCCCCCc---cEEE
Confidence 4678888877766555331 2223445544 678998743 23579999998876655422 2222 2333
Q ss_pred E--ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc--CCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECC
Q psy10286 553 A--LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK--SMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPK 626 (748)
Q Consensus 553 ~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 626 (748)
+ .++.||+.-.. .+.++++++....-..+. .+..| .++++. ++.||+.-... ...++++++.
T Consensus 166 vd~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~~----~~~I~r~~~d 233 (386)
T 3v65_B 166 VDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMD 233 (386)
T ss_dssp EETTTTEEEEEETT-----TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred EEeCCCeEEEEcCC-----CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccCC----CCEEEEEeCC
Confidence 3 37899988542 247888887755433332 22222 234443 68999875321 3579999987
Q ss_pred CCcEEEccCCCCCCcceeEEE--ECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeC
Q psy10286 627 TDEWTSVKPMLTKRCRLGVAA--LNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGG 704 (748)
Q Consensus 627 ~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG 704 (748)
...-+.+..... ..-.+++. .+++||+.-.. .+.|+.+|.....-..+..... ..-.++++.++.||+.--
T Consensus 234 G~~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~-~~P~giav~~~~ly~td~ 306 (386)
T 3v65_B 234 GSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQGL-PHPFAITVFEDSLYWTDW 306 (386)
T ss_dssp SCSCEEEECSSC-SCEEEEEEEGGGTEEEEEETT-----TTEEEEECTTSCSCEEEECSSC-SSEEEEEEETTEEEEEET
T ss_pred CCCcEEEEECCC-CCeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCCCeeEEEEECCC-CCceEEEEECCEEEEeeC
Confidence 654333321111 11234444 37899998643 3689999987543232221111 122456668899999853
Q ss_pred CCCCCCCCeEEEEeCCCC
Q psy10286 705 YDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~ 722 (748)
....|.++|..++
T Consensus 307 -----~~~~V~~~~~~~G 319 (386)
T 3v65_B 307 -----HTKSINSANKFTG 319 (386)
T ss_dssp -----TTTEEEEEETTTC
T ss_pred -----CCCeEEEEECCCC
Confidence 1246777775443
No 243
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.93 E-value=0.17 Score=62.31 Aligned_cols=218 Identities=8% Similarity=0.060 Sum_probs=108.3
Q ss_pred ccceEEEEeCCCCceEEccCCCcccceeEEEE-ECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEE
Q psy10286 475 SLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAV-MKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAA 553 (748)
Q Consensus 475 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~ 553 (748)
....+..||..+++......-....- .+++. -++...+.||.+ ..+..||..+++....... ...-.+++.
T Consensus 981 ~~g~i~i~d~~~~~~~~~~~~h~~~v-~~l~~s~dg~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~--~~~v~~~~~ 1052 (1249)
T 3sfz_A 981 EDGAIKIIELPNNRVFSSGVGHKKAV-RHIQFTADGKTLISSSED-----SVIQVWNWQTGDYVFLQAH--QETVKDFRL 1052 (1249)
T ss_dssp TTSCCEEEETTTTSCEEECCCCSSCC-CCEEECSSSSCEEEECSS-----SBEEEEETTTTEEECCBCC--SSCEEEEEE
T ss_pred CCCCEEEEEcCCCceeeecccCCCce-EEEEECCCCCEEEEEcCC-----CEEEEEECCCCceEEEecC--CCcEEEEEE
Confidence 33567788887765433211111111 11222 256667777754 4688999998876643322 222223333
Q ss_pred ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEc
Q psy10286 554 LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSV 633 (748)
Q Consensus 554 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 633 (748)
..+..++.|+.+ ..+..||..+++-...-..........+..-++..++.|+.++ .+..||..+.+ .+
T Consensus 1053 ~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~-----~v~iwd~~~~~--~~ 1120 (1249)
T 3sfz_A 1053 LQDSRLLSWSFD-----GTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK-----TAKIWSFDLLS--PL 1120 (1249)
T ss_dssp CSSSEEEEEESS-----SEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS-----CCCEECSSSSS--CS
T ss_pred cCCCcEEEEECC-----CcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCcc--ee
Confidence 333334555544 4688889877653221111111112222233666777777644 46677766543 22
Q ss_pred cCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEc-cCC------CCCCcc-eEEEE-ECCEEEEE
Q psy10286 634 KPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMI-ASM------NVMRSR-VALVA-NMGKLWAI 702 (748)
Q Consensus 634 ~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~------p~~r~~-~~~~~-~~~~l~v~ 702 (748)
..+........++.+ ++++++.|+.++ .+.+||..+.+.... .+. ...... .+++. -+++.++.
T Consensus 1121 ~~l~~h~~~v~~~~~s~dg~~lat~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s 1195 (1249)
T 3sfz_A 1121 HELKGHNGCVRCSAFSLDGILLATGDDNG-----EIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVS 1195 (1249)
T ss_dssp BCCCCCSSCEEEEEECSSSSEEEEEETTS-----CCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEE
T ss_pred eeeccCCCcEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEE
Confidence 222222222233333 677888887654 467788776543221 110 011111 12222 25666666
Q ss_pred eCCCCCCCCCeEEEEeCCCCce
Q psy10286 703 GGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~~~W 724 (748)
|| ..+.+||..+++.
T Consensus 1196 ~~-------g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1196 AG-------GYLKWWNVATGDS 1210 (1249)
T ss_dssp ES-------SSEEEBCSSSCBC
T ss_pred CC-------CeEEEEECCCCce
Confidence 65 2688888877653
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.90 E-value=1.7 Score=43.72 Aligned_cols=237 Identities=15% Similarity=0.243 Sum_probs=116.0
Q ss_pred ceEeecCCCCc--eeecccccccce-EEecccccccCCCccceEEEEeCCCC-ceEEccCCCcccceeEEEEECCEEEEE
Q psy10286 439 TVEVFDPLVGR--WQMAEEETLSNA-VISTKSCLTKAGDSLSTVEVFDPLVG-RWQMAEAMSMLRSRVGVAVMKNRLYAF 514 (748)
Q Consensus 439 ~~~~y~~~~~~--W~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~~~~~iyv~ 514 (748)
.+.+|| .+++ |....+.....+ ....++.++.... . ++.||+..+ .|..... ... ....++.++.||+.
T Consensus 41 ~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~--~-l~~~d~~g~~~~~~~~~--~~~-~~~~~~~~~~l~v~ 113 (330)
T 3hxj_A 41 NLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGSD--K-VYAINPDGTEKWRFDTK--KAI-VSDFTIFEDILYVT 113 (330)
T ss_dssp TTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSSC--E-EEEECCCGGGGGGSCC--------CCEEEETTEEEEE
T ss_pred EEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEecC--c-EEEECCCCcEEEEEECC--CCc-ccCceEECCEEEEE
Confidence 467888 5554 443322222222 2223455555432 2 899997432 2532211 111 11223338888874
Q ss_pred ccCCCCCCCCeEEEEECC-CCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCC-eEEEccCCCC
Q psy10286 515 GGYNGSERLSTVEEFDPV-RRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKD-QWRIVKSMQK 591 (748)
Q Consensus 515 GG~~~~~~~~~v~~yd~~-t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~ 591 (748)
.. ...+++||+. ...|....+.+. ..+.+.. ++.+|+. .. -..++.||+... .|....+ .
T Consensus 114 t~------~~~l~~~d~~g~~~~~~~~~~~~---~~~~~~~~~g~l~vg-t~-----~~~l~~~d~~g~~~~~~~~~--~ 176 (330)
T 3hxj_A 114 SM------DGHLYAINTDGTEKWRFKTKKAI---YATPIVSEDGTIYVG-SN-----DNYLYAINPDGTEKWRFKTN--D 176 (330)
T ss_dssp CT------TSEEEEECTTSCEEEEEECSSCC---CSCCEECTTSCEEEE-CT-----TSEEEEECTTSCEEEEEECS--S
T ss_pred ec------CCEEEEEcCCCCEEEEEcCCCce---eeeeEEcCCCEEEEE-cC-----CCEEEEECCCCCEeEEEecC--C
Confidence 32 1468899987 345765433221 1222334 6777763 32 147899999832 3665432 2
Q ss_pred CCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCC-CcEEEccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEE
Q psy10286 592 HRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKT-DEWTSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVE 668 (748)
Q Consensus 592 ~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~ 668 (748)
... .+.+. .++.||+.. ..+++||... ..|+..... ....+.+.. ++.||+... ...++
T Consensus 177 ~~~-~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~---~~~~~~~~~~~g~l~v~t~------~~gl~ 238 (330)
T 3hxj_A 177 AIT-SAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGY---WTVTRPAISEDGTIYVTSL------DGHLY 238 (330)
T ss_dssp CCC-SCCEECTTCCEEEES--------SSEEEECTTSCEEEEECCSS---CCCSCCEECTTSCEEEEET------TTEEE
T ss_pred Cce-eeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCC---cceeceEECCCCeEEEEcC------CCeEE
Confidence 222 22333 467788754 3588899442 346654321 112223333 457777542 14688
Q ss_pred EEeCCCCc-EEEccCCCCCCcceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCC-ceEe
Q psy10286 669 MYDPITDE-WKMIASMNVMRSRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTD-SWAF 726 (748)
Q Consensus 669 ~yd~~~~~-W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~-~W~~ 726 (748)
+||+.... |..-.. ..... ..+.. ++.||+... + ..+++||+... .|+.
T Consensus 239 ~~~~~g~~~~~~~~~--~~~~~-~~~~~~~g~l~v~t~-~-----ggl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 239 AINPDGTEKWRFKTG--KRIES-SPVIGNTDTIYFGSY-D-----GHLYAINPDGTEKWNF 290 (330)
T ss_dssp EECTTSCEEEEEECS--SCCCS-CCEECTTSCEEEECT-T-----CEEEEECTTSCEEEEE
T ss_pred EECCCCCEeEEeeCC--CCccc-cceEcCCCeEEEecC-C-----CCEEEECCCCcEEEEE
Confidence 88875544 543221 11111 12233 677776532 1 25788887433 3543
No 245
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.89 E-value=3 Score=42.21 Aligned_cols=202 Identities=10% Similarity=0.029 Sum_probs=102.1
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEE-ECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC----CcceeEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAV-MKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF----KRSAVGA 551 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~----~r~~~~~ 551 (748)
..+++||+.+++..... .+. .-.+++. -++.+|+... ..+++||+.+++...+...+. .+....+
T Consensus 71 ~~i~~~d~~~~~~~~~~-~~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~ 140 (326)
T 2ghs_A 71 RELHELHLASGRKTVHA-LPF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLHAELESDLPGNRSNDGR 140 (326)
T ss_dssp TEEEEEETTTTEEEEEE-CSS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEE
T ss_pred CEEEEEECCCCcEEEEE-CCC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEE
Confidence 57899999887655442 221 1222332 3788877542 359999999998876654322 1222222
Q ss_pred EEECCEEEEEeC-CCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CC-EEEEEccCCCCcccCeEEEEECC--
Q psy10286 552 AALNDKLYVCGG-YDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DS-YVYALGGHDGLSIFDSVERYDPK-- 626 (748)
Q Consensus 552 ~~~~~~iyv~GG-~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~-- 626 (748)
+.-+|++|+... .........+++|| +.+...+..- .....+.+.. ++ .+|+.... ...+++||..
T Consensus 141 ~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~--~~~~~~i~~s~dg~~lyv~~~~-----~~~I~~~d~~~~ 211 (326)
T 2ghs_A 141 MHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD--ISIPNSICFSPDGTTGYFVDTK-----VNRLMRVPLDAR 211 (326)
T ss_dssp ECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE--ESSEEEEEECTTSCEEEEEETT-----TCEEEEEEBCTT
T ss_pred ECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC--CcccCCeEEcCCCCEEEEEECC-----CCEEEEEEcccc
Confidence 222678887432 11112346789998 4665544210 0111233332 44 67776543 2479999875
Q ss_pred CC-c------EEEccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE---
Q psy10286 627 TD-E------WTSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--- 695 (748)
Q Consensus 627 ~~-~------W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--- 695 (748)
+. . +...... ...-.+++.- ++.+|+.... .+.+.+||+....-..+. +|.. .-.+++..
T Consensus 212 ~Gl~~~~~~~~~~~~~~--~~~p~gi~~d~~G~lwva~~~-----~~~v~~~d~~g~~~~~i~-~~~~-~~~~~af~g~d 282 (326)
T 2ghs_A 212 TGLPTGKAEVFIDSTGI--KGGMDGSVCDAEGHIWNARWG-----EGAVDRYDTDGNHIARYE-VPGK-QTTCPAFIGPD 282 (326)
T ss_dssp TCCBSSCCEEEEECTTS--SSEEEEEEECTTSCEEEEEET-----TTEEEEECTTCCEEEEEE-CSCS-BEEEEEEESTT
T ss_pred cCCcccCceEEEECCCC--CCCCCeeEECCCCCEEEEEeC-----CCEEEEECCCCCEEEEEE-CCCC-CcEEEEEecCC
Confidence 43 2 2222110 1111223322 5678876521 147999999554333332 2322 12223332
Q ss_pred CCEEEEEeCCC
Q psy10286 696 MGKLWAIGGYD 706 (748)
Q Consensus 696 ~~~l~v~GG~~ 706 (748)
++.|||.....
T Consensus 283 ~~~L~vt~~~~ 293 (326)
T 2ghs_A 283 ASRLLVTSARE 293 (326)
T ss_dssp SCEEEEEEBCT
T ss_pred CCEEEEEecCC
Confidence 25788875443
No 246
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.84 E-value=2.7 Score=44.26 Aligned_cols=227 Identities=13% Similarity=0.131 Sum_probs=120.2
Q ss_pred cccccccCCCccceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCe-EEEccC
Q psy10286 465 TKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRV-WNKVSP 541 (748)
Q Consensus 465 ~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~-W~~~~~ 541 (748)
..+.++........+.++|+.++.-..+.... ...+ ++.. ++.+|+...... ..++++|+.++. ...+..
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~~~~~g~ 212 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGWAPTRIGQ 212 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTTCEEEEEE
T ss_pred CCCCEEEEecCCCcEEEEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCceeEEeee
Confidence 34445554444467899999887655543221 1112 2322 456777654221 279999987543 223311
Q ss_pred CC--CCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccC---CCCCCcc-e-EEEEE--CCEEEEEcc
Q psy10286 542 MC--FKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKS---MQKHRSA-G-GVIAF--DSYVYALGG 610 (748)
Q Consensus 542 ~~--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~r~~-~-~~~~~--~~~iyv~GG 610 (748)
.+ ....-+++++. ++.||+..+ ...+++||+.+........ ....... . .++.. ++.+|+...
T Consensus 213 ~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 213 LGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp CCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred ccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 11 11222334443 689999432 2479999998887655421 1111222 1 45544 589999864
Q ss_pred CCCCcccCeEEEEECCCCcEEEccCCCC----------C--CcceeEEEE-CCEEEEEec-cCCCccccEEEEEeCCCCc
Q psy10286 611 HDGLSIFDSVERYDPKTDEWTSVKPMLT----------K--RCRLGVAAL-NNKIYVCGG-YDGAIFLQSVEMYDPITDE 676 (748)
Q Consensus 611 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~----------~--r~~~~~~~~-~~~i~v~GG-~~~~~~~~~v~~yd~~~~~ 676 (748)
. .+.+++||+....-........ . ..-.+++.- ++.||+... . .+.|.++|+.+..
T Consensus 287 ~-----~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-----~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 287 N-----LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-----GYCLRKLDILDGY 356 (409)
T ss_dssp T-----TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-----TCEEEEEETTTTE
T ss_pred C-----CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-----CCEEEEEECCCCE
Confidence 4 3579999987652222211100 0 111233333 567998864 3 3579999976776
Q ss_pred EEEccCCC-----------CCCc--ceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeC
Q psy10286 677 WKMIASMN-----------VMRS--RVALVAN-MGKLWAIGGYDGVSNLPTVEVYDP 719 (748)
Q Consensus 677 W~~~~~~p-----------~~r~--~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~ 719 (748)
...+...+ ..+. -+++++. ++.|||....+ ..|..+++
T Consensus 357 v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n-----~~Ir~i~~ 408 (409)
T 3hrp_A 357 VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG-----KAIRKYAV 408 (409)
T ss_dssp EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT-----CEEEEEEE
T ss_pred EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCC-----CeEEEEEe
Confidence 66553211 0111 2334433 48899886422 35666654
No 247
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=94.79 E-value=1.1 Score=45.48 Aligned_cols=216 Identities=9% Similarity=-0.018 Sum_probs=108.2
Q ss_pred cceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 554 (748)
...+|.+|..+++-..+. ........ +|+..++....+......++.+|..+++...+...+. ....+..
T Consensus 42 ~~~l~~~d~~~~~~~~l~------~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~ws 112 (347)
T 2gop_A 42 ENTIVIENLKNNARRFIE------NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN---IRSLEWN 112 (347)
T ss_dssp EEEEEEEETTTCCEEEEE------SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE---EEEEEEC
T ss_pred cceEEEEeCCCCceEEcc------cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC---ccceeEC
Confidence 356888888887766551 11122222 4543333332221223469999999888776654332 2222222
Q ss_pred -CCEEEEEeCCC------------------CC----CCCceEEEEeCCCCeE-EEccCCCCCCcceEEEEECCEEEEEcc
Q psy10286 555 -NDKLYVCGGYD------------------GV----SSLNTVECYEPDKDQW-RIVKSMQKHRSAGGVIAFDSYVYALGG 610 (748)
Q Consensus 555 -~~~iyv~GG~~------------------~~----~~~~~~~~yd~~~~~W-~~~~~~~~~r~~~~~~~~~~~iyv~GG 610 (748)
+|+.++++... +. .....++.+|+.+++. ..+.. + .....+...+.+++.+.
T Consensus 113 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~~ 188 (347)
T 2gop_A 113 EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNVP 188 (347)
T ss_dssp TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEEE
T ss_pred CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEEe
Confidence 55433343211 00 1135789999998887 66554 2 22333333333555554
Q ss_pred CCCCc---c-cCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCC---CccccEEEEEeCCCCcEEEccCC
Q psy10286 611 HDGLS---I-FDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDG---AIFLQSVEMYDPITDEWKMIASM 683 (748)
Q Consensus 611 ~~~~~---~-~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~---~~~~~~v~~yd~~~~~W~~~~~~ 683 (748)
.++.. . ...++.+| +.++..+..- .......-+|+.+++++... ......++.+| +.++..+..-
T Consensus 189 ~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~ 260 (347)
T 2gop_A 189 HREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDE 260 (347)
T ss_dssp CCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTT
T ss_pred cccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEecccc
Confidence 43211 1 45789999 6777766432 12222244665444443322 12346899999 6667766432
Q ss_pred CCCCcceE-EEEECCEEEEEeCCCCCCCCCeEEEEe
Q psy10286 684 NVMRSRVA-LVANMGKLWAIGGYDGVSNLPTVEVYD 718 (748)
Q Consensus 684 p~~r~~~~-~~~~~~~l~v~GG~~~~~~~~~v~~yd 718 (748)
.. ..... .+..++ +|+.++.++ ...++ ++
T Consensus 261 ~~-~~~~~~~~~sdg-~~~~~~~~~---~~~l~-~~ 290 (347)
T 2gop_A 261 VD-RGVGQAKIKDGK-VYFTLFEEG---SVNLY-IW 290 (347)
T ss_dssp CC-SEEEEEEEETTE-EEEEEEETT---EEEEE-EE
T ss_pred CC-cccCCccEEcCc-EEEEEecCC---cEEEE-Ec
Confidence 11 11111 222244 666665443 23466 66
No 248
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.73 E-value=2.2 Score=42.87 Aligned_cols=219 Identities=12% Similarity=0.085 Sum_probs=107.0
Q ss_pred ceEEEEeCCCCc----eEEccCCCcccceeEEEEE-CCE-EEEEccCCCCCCCCeEEEEEC-CCCeEEEccCCCCCccee
Q psy10286 477 STVEVFDPLVGR----WQMAEAMSMLRSRVGVAVM-KNR-LYAFGGYNGSERLSTVEEFDP-VRRVWNKVSPMCFKRSAV 549 (748)
Q Consensus 477 ~~~~~yd~~~~~----W~~~~~~~~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~-~t~~W~~~~~~~~~r~~~ 549 (748)
..+..||..++. ...... ....-.+++.. ++. .++.|+.+ ..+..||. .+.+...+...+....-.
T Consensus 33 ~~v~iw~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~v~ 105 (342)
T 1yfq_A 33 GSLTVYKFDIQAKNVDLLQSLR--YKHPLLCCNFIDNTDLQIYVGTVQ-----GEILKVDLIGSPSFQALTNNEANLGIC 105 (342)
T ss_dssp SEEEEEEEETTTTEEEEEEEEE--CSSCEEEEEEEESSSEEEEEEETT-----SCEEEECSSSSSSEEECBSCCCCSCEE
T ss_pred CeEEEEEeCCCCccccceeeee--cCCceEEEEECCCCCcEEEEEcCC-----CeEEEEEeccCCceEeccccCCCCceE
Confidence 456777766655 222221 11222233333 666 77777754 36889999 887766554411222222
Q ss_pred EEEEECCEEEEEeCCCCCCCCceEEEEeCCCC---e----EEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEE
Q psy10286 550 GAAALNDKLYVCGGYDGVSSLNTVECYEPDKD---Q----WRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVER 622 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~---~----W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 622 (748)
+++...+..++.|+.+ ..+..||..+. . .+.+..+..+..-.+++...+. ++.|+.+ ..+..
T Consensus 106 ~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~d-----~~i~i 174 (342)
T 1yfq_A 106 RICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMNN-----SQVQW 174 (342)
T ss_dssp EEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-EEEEEST-----TEEEE
T ss_pred EEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-EEEEeCC-----CeEEE
Confidence 3333335556666654 46777876530 0 2222223322222344444555 5556553 36889
Q ss_pred EECCC-Cc--EEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCC--------cEEEccCCC--C--
Q psy10286 623 YDPKT-DE--WTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITD--------EWKMIASMN--V-- 685 (748)
Q Consensus 623 yd~~~-~~--W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~--------~W~~~~~~p--~-- 685 (748)
||..+ .. ...... +....-.+++.. ++..++.|+.++ .+.+||.... ....-.... .
T Consensus 175 ~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (342)
T 1yfq_A 175 FRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSIDG-----RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDT 248 (342)
T ss_dssp EESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETTS-----EEEEEECCTTCCSTTCTTCEEEECCCCCTTCC
T ss_pred EECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecCC-----cEEEEEEcCCCcccccccceeeeccccccccc
Confidence 99887 33 222211 111112222332 467778887543 4555554332 122111110 0
Q ss_pred -CCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 686 -MRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 686 -~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
.......+.+ ++++++.|+.++ .+.+||..+++.
T Consensus 249 ~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~ 285 (342)
T 1yfq_A 249 NLAYPVNSIEFSPRHKFLYTAGSDG-----IISCWNLQTRKK 285 (342)
T ss_dssp SSCCCEEEEEECTTTCCEEEEETTS-----CEEEEETTTTEE
T ss_pred ccceeEEEEEEcCCCCEEEEecCCc-----eEEEEcCccHhH
Confidence 0112222333 577777777543 589999987654
No 249
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.70 E-value=0.72 Score=46.03 Aligned_cols=188 Identities=13% Similarity=0.185 Sum_probs=91.6
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCC-CCcceeEEEEE---CCEEEEEeCCCCCCCCceEEEEeCCCCeE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC-FKRSAVGAAAL---NDKLYVCGGYDGVSSLNTVECYEPDKDQW 583 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~-~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 583 (748)
+++.++.||.+ ..+..||..+.....+..+. ....-.+++.. ++.+++.|+.+ ..+..||..++.|
T Consensus 20 ~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-----~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 20 YGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVMIWKEENGRW 89 (297)
T ss_dssp TSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----TEEEEEEBSSSCB
T ss_pred CCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-----CEEEEEEcCCCce
Confidence 56667777754 35777777644322222211 11111223322 26777778765 4678889888776
Q ss_pred EEccCCCCCCcceEEEEE--C--CEEEEEccCCCCcccCeEEEEECCCCc-EEEccCCCCCCcceeEEEE----------
Q psy10286 584 RIVKSMQKHRSAGGVIAF--D--SYVYALGGHDGLSIFDSVERYDPKTDE-WTSVKPMLTKRCRLGVAAL---------- 648 (748)
Q Consensus 584 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~---------- 648 (748)
..+..+.........+.+ + +.+++.|+.++ .+..||..+.. +... .+.........+.+
T Consensus 90 ~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 90 SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEBCSSSCBCCE-EEECCSSCEEEEEECCCC------
T ss_pred EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEecCCCceeee-eeecccCccceEeecCCccccccc
Confidence 544332221112222222 2 56677777643 57777776542 2100 00000001111111
Q ss_pred -----CCEEEEEeccCCCccccEEEEEeCCC--CcEEEccCCCCCCcceEEEEE--C---CEEEEEeCCCCCCCCCeEEE
Q psy10286 649 -----NNKIYVCGGYDGAIFLQSVEMYDPIT--DEWKMIASMNVMRSRVALVAN--M---GKLWAIGGYDGVSNLPTVEV 716 (748)
Q Consensus 649 -----~~~i~v~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~~--~---~~l~v~GG~~~~~~~~~v~~ 716 (748)
+++.++.||.++ .|.+||..+ ..|.....+.........+.. + +.+++.|+.++ .+.+
T Consensus 164 ~~~~~~~~~l~sgs~D~-----~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~-----~v~i 233 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR-----TCII 233 (297)
T ss_dssp ------CCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----CEEE
T ss_pred CCCCCCcceEEEEcCCC-----cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC-----cEEE
Confidence 245778887654 466666544 346554444322222333333 2 47778887553 5777
Q ss_pred EeCCC
Q psy10286 717 YDPST 721 (748)
Q Consensus 717 yd~~~ 721 (748)
||..+
T Consensus 234 Wd~~~ 238 (297)
T 2pm7_B 234 WTQDN 238 (297)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 77765
No 250
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.69 E-value=1.7 Score=50.02 Aligned_cols=209 Identities=11% Similarity=0.089 Sum_probs=110.0
Q ss_pred ceEEEEeCCCCceEEccC--CC---cccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCC------CeEE---E---
Q psy10286 477 STVEVFDPLVGRWQMAEA--MS---MLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVR------RVWN---K--- 538 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~--~~---~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t------~~W~---~--- 538 (748)
.-+.+||+.+++++.... .. ....-+++... ++.||+- ... .-+.+||+.+ ..+. .
T Consensus 392 ~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig-T~~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 465 (758)
T 3ott_A 392 GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIS-TCL-----GGIFVVDKHKLMQSTSGQYIAEQNYSV 465 (758)
T ss_dssp TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEE-ESS-----SCEEEEEHHHHHHCCSSEEECSEEECG
T ss_pred CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEE-ECC-----CceEEEccccccccCCcceeccccccc
Confidence 468899999998876531 11 11112233332 5678873 221 2377787653 2232 1
Q ss_pred ccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCC-Ccc-eEEEE-ECCEEEEEccCCCC
Q psy10286 539 VSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKH-RSA-GGVIA-FDSYVYALGGHDGL 614 (748)
Q Consensus 539 ~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-r~~-~~~~~-~~~~iyv~GG~~~~ 614 (748)
...++.. .-.+...- +|.||+.||.. ..+.+||+.+++++....-... ... .++.. .+|.|++-. .
T Consensus 466 ~~~l~~~-~i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~--- 535 (758)
T 3ott_A 466 HNGLSGM-FINQIIPDNEGNVWVLLYNN-----KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H--- 535 (758)
T ss_dssp GGTCSCS-CEEEEEECTTSCEEEEETTC-----SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T---
T ss_pred ccccccc-eeeeEEEcCCCCEEEEccCC-----CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c---
Confidence 1122221 11222222 67899877643 4589999999999876421111 111 22222 257888643 2
Q ss_pred cccCeEEEEECCCCcEEEcc--CCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEE
Q psy10286 615 SIFDSVERYDPKTDEWTSVK--PMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVAL 692 (748)
Q Consensus 615 ~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 692 (748)
..+.+||+.+++++... .+|. ..-.+++.-+|.||+.+. +.+.+||+++.+....+ ++......++
T Consensus 536 ---~Gl~~~~~~~~~~~~~~~~gl~~-~~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~-~~~~~~~~~~ 603 (758)
T 3ott_A 536 ---GGVMRINPKDESQQSISFGSFSN-NEILSMTCVKNSIWVSTT-------NGLWIIDRKTMDARQQN-MTNKRFTSLL 603 (758)
T ss_dssp ---TEEEEECC--CCCCBCCCCC----CCEEEEEEETTEEEEEES-------SCEEEEETTTCCEEEC---CCCCCSEEE
T ss_pred ---CceEEEecCCCceEEecccCCCc-cceEEEEECCCCEEEECC-------CCeEEEcCCCceeEEec-CCCCceeeeE
Confidence 35899999988876553 2332 222344444788888763 45889999998877653 3333333222
Q ss_pred EEE-CCEEEEEeCCCCCCCCCeEEEEeCC
Q psy10286 693 VAN-MGKLWAIGGYDGVSNLPTVEVYDPS 720 (748)
Q Consensus 693 ~~~-~~~l~v~GG~~~~~~~~~v~~yd~~ 720 (748)
... +|.|| |||.+ .+..|+|+
T Consensus 604 ~~~~~G~l~-fG~~~------Gl~~f~p~ 625 (758)
T 3ott_A 604 FDPKEDCVY-LGGAD------GFGISHSN 625 (758)
T ss_dssp EETTTTEEE-EECBS------EEEEEEC-
T ss_pred EECCCCcEE-EecCC------ceEEEChh
Confidence 222 56655 55533 35555554
No 251
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=94.68 E-value=2.7 Score=38.97 Aligned_cols=145 Identities=9% Similarity=0.066 Sum_probs=83.8
Q ss_pred EEEEECCEEEEEeCCCCCCCCceEEEEeCCC--CeEE--Ec----cCCCCCCcceEEEEE--CCEEEEEccCCCCcccCe
Q psy10286 550 GAAALNDKLYVCGGYDGVSSLNTVECYEPDK--DQWR--IV----KSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDS 619 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~--~~W~--~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 619 (748)
+++..+|++|+|-| +.+|+++... .... .+ +.+|.. . -++... ++++|+|-|. .
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-I-DAa~~~~~~~~~yfFkG~-------~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-L-DSVFEEPLSKKLFFFSGR-------Q 74 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-C-SEEEECTTTCCEEEEETT-------E
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCC-c-cEEEEECCCCeEEEEeCC-------E
Confidence 34557999999988 5788887765 2222 12 234432 1 233333 6899999884 7
Q ss_pred EEEEECCCCcE-EEccC--CCCCCcceeEEE--ECCEEEEEeccCCCccccEEEEEeCCCCcEEE-----cc-CCC-CCC
Q psy10286 620 VERYDPKTDEW-TSVKP--MLTKRCRLGVAA--LNNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-----IA-SMN-VMR 687 (748)
Q Consensus 620 ~~~yd~~~~~W-~~~~~--~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-----~~-~~p-~~r 687 (748)
.|+|+..+..- ..+.. +|..-...-++. .++++|++-| +..|.||..+++-.. +. ..+ .+.
T Consensus 75 yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~ 147 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVPL 147 (195)
T ss_dssp EEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSCS
T ss_pred EEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCCC
Confidence 88888543211 11222 222111223333 3689999977 688999987754211 11 111 122
Q ss_pred cceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 688 SRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 688 ~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
.-.++...++.+|+|-| +..+.||..+..=
T Consensus 148 ~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~v 177 (195)
T 1itv_A 148 DTHDVFQFREKAYFCQD-------RFYWRVSSRSELN 177 (195)
T ss_dssp SCSEEEEETTEEEEEET-------TEEEEEECCTTCC
T ss_pred CCCEEEEeCCeEEEEeC-------CEEEEEECCccEE
Confidence 23345556899999987 4688898877653
No 252
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.67 E-value=1.9 Score=47.63 Aligned_cols=221 Identities=13% Similarity=0.034 Sum_probs=108.8
Q ss_pred ceEEEEeCCCC----c-eEEccCCCcccceeEEEEE---CCEEEEEccCCCCCCCCeEEEEECCCC------eEEEccCC
Q psy10286 477 STVEVFDPLVG----R-WQMAEAMSMLRSRVGVAVM---KNRLYAFGGYNGSERLSTVEEFDPVRR------VWNKVSPM 542 (748)
Q Consensus 477 ~~~~~yd~~~~----~-W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~t~------~W~~~~~~ 542 (748)
..+..||..++ + -..+.....+. -.+++.. ++..++.|+.+ ..+..||..+. .......+
T Consensus 39 ~~v~v~~~~~~~~~~~~~~~~~~h~~~~-v~~~~~sp~~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~~~~~ 112 (615)
T 1pgu_A 39 KSAFVRCLDDGDSKVPPVVQFTGHGSSV-VTTVKFSPIKGSQYLCSGDES-----GKVIVWGWTFDKESNSVEVNVKSEF 112 (615)
T ss_dssp TEEEEEECCSSCCSSCSEEEECTTTTSC-EEEEEECSSTTCCEEEEEETT-----SEEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred CeEEEEECCCCCCccccceEEecCCCce-EEEEEECcCCCCCEEEEecCC-----CEEEEEeCCCCcccccccccccchh
Confidence 46788888765 2 22222111110 1222222 56777777754 35777777544 33333222
Q ss_pred CC-CcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCE-EEEEccCCCCccc
Q psy10286 543 CF-KRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSY-VYALGGHDGLSIF 617 (748)
Q Consensus 543 ~~-~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~-iyv~GG~~~~~~~ 617 (748)
.. ...-.+++.. +++.++.||.+.. ....++.||... .-. .+.........+.+ ++. +++.|+.+
T Consensus 113 ~~~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~v~~~d~~~-~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~d----- 182 (615)
T 1pgu_A 113 QVLAGPISDISWDFEGRRLCVVGEGRD-NFGVFISWDSGN-SLG---EVSGHSQRINACHLKQSRPMRSMTVGDD----- 182 (615)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECCSS-CSEEEEETTTCC-EEE---ECCSCSSCEEEEEECSSSSCEEEEEETT-----
T ss_pred hcccccEEEEEEeCCCCEEEEeccCCC-CccEEEEEECCC-cce---eeecCCccEEEEEECCCCCcEEEEEeCC-----
Confidence 21 1112222222 6666666664422 235677777322 111 12211112222222 333 67777764
Q ss_pred CeEEEEECCCCcEEEccCCCCCCc---ceeEEEE--C-CEEEEEeccCCCccccEEEEEeCCCCcEEEcc-CC--CCCCc
Q psy10286 618 DSVERYDPKTDEWTSVKPMLTKRC---RLGVAAL--N-NKIYVCGGYDGAIFLQSVEMYDPITDEWKMIA-SM--NVMRS 688 (748)
Q Consensus 618 ~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~--p~~r~ 688 (748)
..+..||..+.+-... +..... ....+.+ + +..++.|+.+ ..+.+||..+.+....- .. .....
T Consensus 183 ~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~ 255 (615)
T 1pgu_A 183 GSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSD-----RKISCFDGKSGEFLKYIEDDQEPVQGG 255 (615)
T ss_dssp TEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETT-----CCEEEEETTTCCEEEECCBTTBCCCSC
T ss_pred CcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCEeEEecccccccCCc
Confidence 4688898776553322 221111 2223333 4 6777888764 36889998877654322 10 11111
Q ss_pred ceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 689 RVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 689 ~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
-.++...+++.++.|+.+ ..+.+||..+++..
T Consensus 256 v~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 256 IFALSWLDSQKFATVGAD-----ATIRVWDVTTSKCV 287 (615)
T ss_dssp EEEEEESSSSEEEEEETT-----SEEEEEETTTTEEE
T ss_pred eEEEEEcCCCEEEEEcCC-----CcEEEEECCCCcEE
Confidence 112222277788888754 36899999876543
No 253
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.66 E-value=4.2 Score=41.03 Aligned_cols=189 Identities=15% Similarity=0.084 Sum_probs=104.5
Q ss_pred CeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCC--eEEEccCC------CCCCc
Q psy10286 524 STVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKD--QWRIVKSM------QKHRS 594 (748)
Q Consensus 524 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~------~~~r~ 594 (748)
..+.++|+.+.+.........-..-+++++. +|++|+.... ...+.+||+... .-..+... .....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 4699999987765432211111122344443 6789988653 257899998765 22222110 01111
Q ss_pred c-eEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCC-------CCC-CcceeEEEE-C-CEEEEEeccCCC
Q psy10286 595 A-GGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPM-------LTK-RCRLGVAAL-N-NKIYVCGGYDGA 661 (748)
Q Consensus 595 ~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-------p~~-r~~~~~~~~-~-~~i~v~GG~~~~ 661 (748)
. ..+++. ++.+|+..+.. ...+.+||+....-..+... +.. ..-++++.- + +.|||....+
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-- 217 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-- 217 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT--
T ss_pred CCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC--
Confidence 1 234443 68999998631 24799999665544433211 111 112344443 4 8999987543
Q ss_pred ccccEEEEEeCCCCcEEEc-cCCCCCCcceEEEEECCEEEEEeCCCC--CCCCCeEEEEeCCCCceEe
Q psy10286 662 IFLQSVEMYDPITDEWKMI-ASMNVMRSRVALVANMGKLWAIGGYDG--VSNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 662 ~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~l~v~GG~~~--~~~~~~v~~yd~~~~~W~~ 726 (748)
+.|.+||+.+.+.... ........-.+++...+.+|+..|... +.....+.++|+.+++...
T Consensus 218 ---~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 218 ---GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp ---TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEE
T ss_pred ---CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEE
Confidence 5899999986665443 222222222334444577888777432 2234579999988876544
No 254
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.65 E-value=4.1 Score=46.68 Aligned_cols=239 Identities=15% Similarity=0.112 Sum_probs=123.0
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCC---------CCCCeEEEEECCCCeE--EEccCCC-
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGS---------ERLSTVEEFDPVRRVW--NKVSPMC- 543 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~---------~~~~~v~~yd~~t~~W--~~~~~~~- 543 (748)
..++.+|..+++..... .+..+. .+.+.. ++.||. +..+.. .....+++++..+..- ..+...+
T Consensus 189 ~~i~v~dl~tg~~~~~~-~~~~~~-~~~~wspD~~l~~-~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~ 265 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADE-LKWVKF-SGLAWLGNDALLY-SRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE 265 (741)
T ss_dssp EEEEEEETTTCCEEEEE-EEEEES-CCCEESTTSEEEE-EECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEEEEEECCCCCCCCcc-CCCcee-ccEEEECCCEEEE-EEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC
Confidence 46999999999875531 111110 112222 433433 332221 1245688888876641 1222222
Q ss_pred CCcceeEEEE-ECCEEEEEeCCCCCCCCceEEEEeCCCC--e-EEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCe
Q psy10286 544 FKRSAVGAAA-LNDKLYVCGGYDGVSSLNTVECYEPDKD--Q-WRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDS 619 (748)
Q Consensus 544 ~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~-W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 619 (748)
.+....+... -+|+..++....+....+.++.+|..+. . |..+..-..... ......++.||+....++ ....
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~s~~~~--~~~~ 342 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW-DFVDGVGDQLWFVSGDGA--PLKK 342 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE-EEEEEETTEEEEEECTTC--TTCE
T ss_pred CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE-EEEeccCCEEEEEECCCC--CCCE
Confidence 1222223322 2665444433332223568999998877 6 777754332222 222345778887754422 2457
Q ss_pred EEEEECCC--CcEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEE-EC
Q psy10286 620 VERYDPKT--DEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVA-NM 696 (748)
Q Consensus 620 ~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~ 696 (748)
++.+|..+ ..|+.+-+-... ...++...++.+++....++ ...++.+|.....-..+. +|.......... -+
T Consensus 343 l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d 417 (741)
T 1yr2_A 343 IVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHDA---KSQVLAFDLDGKPAGAVS-LPGIGSASGLSGRPG 417 (741)
T ss_dssp EEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEETT---EEEEEEEETTSCEEEECB-CSSSCEEEEEECCBT
T ss_pred EEEEeCCCCccccEEEecCCCC-eEEEEEEECCEEEEEEEECC---EEEEEEEeCCCCceeecc-CCCCeEEEEeecCCC
Confidence 99999887 579887532211 12233444888888776544 357889997655444443 221111111111 13
Q ss_pred C-EEEEEe-CCCCCCCCCeEEEEeCCCCceEecCC
Q psy10286 697 G-KLWAIG-GYDGVSNLPTVEVYDPSTDSWAFVAP 729 (748)
Q Consensus 697 ~-~l~v~G-G~~~~~~~~~v~~yd~~~~~W~~~~~ 729 (748)
+ .|++.. +.. .-.+++.||..+++.+.+..
T Consensus 418 ~~~l~~~~ss~~---~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 418 DRHAYLSFSSFT---QPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp CSCEEEEEEETT---EEEEEEEEETTTTEEEECSC
T ss_pred CCEEEEEEcCCC---CCCEEEEEECCCCcEEEEec
Confidence 3 344432 221 22478999999988776644
No 255
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=94.55 E-value=3.5 Score=42.40 Aligned_cols=71 Identities=18% Similarity=0.258 Sum_probs=43.7
Q ss_pred CCEEEEEeccCC-----CccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 649 NNKIYVCGGYDG-----AIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 649 ~~~i~v~GG~~~-----~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
++++|+....++ ....+.++++|.++.+ .+..++... -.+++.. +..||+.++ ++|.+||.++
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~-------~~v~v~D~~t 334 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG-------GNVNVYDISQ 334 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS-------SCEEEEECSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC-------CeEEEEECCC
Confidence 478998764221 1124689999998874 444444444 4555444 456665542 5799999988
Q ss_pred CceEecCC
Q psy10286 722 DSWAFVAP 729 (748)
Q Consensus 722 ~~W~~~~~ 729 (748)
+.-+.+..
T Consensus 335 ~~l~~~~~ 342 (361)
T 2oiz_A 335 PEPKLLRT 342 (361)
T ss_dssp SSCEEEEE
T ss_pred CcceeeEE
Confidence 73355554
No 256
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.54 E-value=0.97 Score=45.78 Aligned_cols=153 Identities=16% Similarity=0.074 Sum_probs=79.9
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CC-EEEEEeCCCCCCCCceEEEEeCCCCeEEE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-ND-KLYVCGGYDGVSSLNTVECYEPDKDQWRI 585 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 585 (748)
++.+|+.++.+ ..++++|+.+++....-+.+.....+..+.. ++ .+|+.++.+ ..+..||+.+++...
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCKNTF 79 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEeCCCCcEEE
Confidence 67788887643 5799999999876543333321122333333 44 578776432 579999999887543
Q ss_pred ccCCCC-----CCcceEEEEE-CC-EEEEEccC---CCC---cccCeEEEEECCCCcEEE-ccCCCCCCcceeEEE-ECC
Q psy10286 586 VKSMQK-----HRSAGGVIAF-DS-YVYALGGH---DGL---SIFDSVERYDPKTDEWTS-VKPMLTKRCRLGVAA-LNN 650 (748)
Q Consensus 586 ~~~~~~-----~r~~~~~~~~-~~-~iyv~GG~---~~~---~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~ 650 (748)
.-..+. ...-..++.. ++ .+|+.+.. ... .....+..||+.+++-.. +.....++...+++. -++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 322221 1111233332 44 55554421 000 002579999987743211 111122222233332 256
Q ss_pred EEEEEeccCCCccccEEEEEeCCCCcEE
Q psy10286 651 KIYVCGGYDGAIFLQSVEMYDPITDEWK 678 (748)
Q Consensus 651 ~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 678 (748)
++|+.++ +++++|+.+.+-.
T Consensus 160 ~l~~~~~--------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 160 SLYVAGP--------DIYKMDVKTGKYT 179 (349)
T ss_dssp CEEEESS--------SEEEECTTTCCEE
T ss_pred cEEEccC--------cEEEEeCCCCcee
Confidence 6777432 3888888776644
No 257
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.53 E-value=2.5 Score=47.57 Aligned_cols=190 Identities=8% Similarity=-0.015 Sum_probs=107.0
Q ss_pred ceEEEEeCCC------CceEEcc-CCCcccceeEEEE-ECCEEEEEccCCCCC---CCCeEEEEECC-CC---eEEEccC
Q psy10286 477 STVEVFDPLV------GRWQMAE-AMSMLRSRVGVAV-MKNRLYAFGGYNGSE---RLSTVEEFDPV-RR---VWNKVSP 541 (748)
Q Consensus 477 ~~~~~yd~~~------~~W~~~~-~~~~~r~~~~~~~-~~~~iyv~GG~~~~~---~~~~v~~yd~~-t~---~W~~~~~ 541 (748)
..++.+|..+ ++...+. .-.. .....+. -+|+..++...+... ....++.+|.. ++ +...+..
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR--FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS--EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC--cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 5789999988 6666665 3221 1111112 255544444332211 23579999998 56 3444332
Q ss_pred CCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCC----c---ceEEEEE-CCEEEEEccCC
Q psy10286 542 MCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHR----S---AGGVIAF-DSYVYALGGHD 612 (748)
Q Consensus 542 ~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r----~---~~~~~~~-~~~iyv~GG~~ 612 (748)
-. .......+.. +|++|+.+..++ ...++.+|+.++++..+.+..... + ....+.. ++++++.+..
T Consensus 239 ~~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~- 313 (662)
T 3azo_A 239 GP-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK- 313 (662)
T ss_dssp ET-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-
T ss_pred CC-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-
Confidence 11 1122233333 778887776543 247999999899998875432211 1 1223333 6777777654
Q ss_pred CCcccCeEEEEECCCCcEEEccCCCCCCcceeE-EEECCEEEEEeccCCCccccEEEEEeCCCCcEEEc
Q psy10286 613 GLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGV-AALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMI 680 (748)
Q Consensus 613 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 680 (748)
+ ...++.+|..+.+.+.+... ....... ..-++.+++..+... ....++.+|..+.+.+.+
T Consensus 314 ~---~~~l~~~d~~~~~~~~l~~~--~~~~~~~~s~~~~~~~~~~~~~~--~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 314 G---AAVLGILDPESGELVDAAGP--WTEWAATLTVSGTRAVGVAASPR--TAYEVVELDTVTGRARTI 375 (662)
T ss_dssp S---SCEEEEEETTTTEEEECCSS--CCEEEEEEEEETTEEEEEEEETT--EEEEEEEEETTTCCEEEE
T ss_pred C---ccEEEEEECCCCcEEEecCC--CCeEEEEEecCCCEEEEEEcCCC--CCCEEEEEECCCCceEEe
Confidence 3 45799999988887776432 1111222 334666666654322 235789999988887776
No 258
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.52 E-value=3.5 Score=40.82 Aligned_cols=255 Identities=15% Similarity=0.129 Sum_probs=116.7
Q ss_pred ceEeecCCCCceeeccc-cc----ccceEEecccccccCCCccceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEE
Q psy10286 439 TVEVFDPLVGRWQMAEE-ET----LSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYA 513 (748)
Q Consensus 439 ~~~~y~~~~~~W~~~~~-~~----~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv 513 (748)
++..||..+++....-. .. +....+..++.....|..-..+..+|..+++-...-.. ..........++.+.+
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~--h~~~~~~~~~~~~~l~ 123 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS--HSARVGSLSWNSYILS 123 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEEETTEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC--ccceEEEeecCCCEEE
Confidence 68899998887654321 11 11222333433333344445788899888764332211 1112223334556666
Q ss_pred EccCCCCCCCCeEEEEECCCCeEEEccCCC-CCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeE--EEccCCC
Q psy10286 514 FGGYNGSERLSTVEEFDPVRRVWNKVSPMC-FKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQW--RIVKSMQ 590 (748)
Q Consensus 514 ~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~~ 590 (748)
.|+.+ ..+..++..+.......... ...........+++.++.|+.+ ..+..||..+.+- .......
T Consensus 124 s~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~ 193 (318)
T 4ggc_A 124 SGSRS-----GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFT 193 (318)
T ss_dssp EEETT-----SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCBTTBSCCSEEEC
T ss_pred EEecC-----CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC-----cceeEEECCCCcccccceeeec
Confidence 66643 24455555544322111111 1111112222256666677654 3567788765431 1111111
Q ss_pred CCCcc-eEEEEE--CC-EEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccE
Q psy10286 591 KHRSA-GGVIAF--DS-YVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQS 666 (748)
Q Consensus 591 ~~r~~-~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~ 666 (748)
..... .+.+.. ++ .+++.+|.. ...+..+|..+..-..................++.+++.+|... ..
T Consensus 194 ~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d----~~ 265 (318)
T 4ggc_A 194 QHQGAVKAVAWCPWQSNVLATGGGTS----DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ----NQ 265 (318)
T ss_dssp CCCSCEEEEEECTTSTTEEEEEECTT----TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTT----CC
T ss_pred ccCCceEEEEecCCCCcEEEEEecCC----CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCC----CE
Confidence 11111 111221 23 334444432 23577788877665443222211111111122456666555322 46
Q ss_pred EEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCC
Q psy10286 667 VEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPS 720 (748)
Q Consensus 667 v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~ 720 (748)
+.+||..+.+- +..+........++.+ ++++++.||.++ .|.++|..
T Consensus 266 i~iwd~~~~~~--~~~l~gH~~~V~~l~~spdg~~l~S~s~D~-----~v~iWd~~ 314 (318)
T 4ggc_A 266 LVIWKYPTMAK--VAELKGHTSRVLSLTMSPDGATVASAAADE-----TLRLWRCF 314 (318)
T ss_dssp EEEEETTTCCE--EEEECCCSSCEEEEEECTTSSCEEEEETTT-----EEEEECCS
T ss_pred EEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEecCC-----eEEEEECC
Confidence 88999876542 2223222222223333 677888888653 57777764
No 259
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=94.52 E-value=0.018 Score=50.25 Aligned_cols=86 Identities=14% Similarity=0.196 Sum_probs=59.9
Q ss_pred ccEEEEECCeEEeeeeeeeeccCHHHHHhhcccccccccceeeeecchheehhhccccccccccccccccccceeeeecC
Q psy10286 75 CDVTIKVDDQSFTCHRIVLAATIPYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQG 154 (748)
Q Consensus 75 ~Dv~i~~~~~~~~aHk~iL~a~S~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 154 (748)
.=|+|.|+|+.|...+..|.... ..||... +. ... ......++-+ +
T Consensus 35 ~~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~--~~--~~~--------------------------~~~~~g~yFi-D 80 (140)
T 2nz0_B 35 ELIVLNVSGRRFQTWRTTLERYP---DTLLGST--EK--EFF--------------------------FNEDTKEYFF-D 80 (140)
T ss_dssp CEEEEEETTEEEEEEHHHHHTCT---TSTTTSG--GG--GGS--------------------------EETTTTEEEE-C
T ss_pred CEEEEEECCEEEEeeHHHHhcCC---Ceeeccc--CC--ccc--------------------------ccCCCCeEEE-e
Confidence 45788899999999998886432 2344331 00 000 0112233333 4
Q ss_pred CCHHHHHHHHHhhhceeEEeech-hHHHHHHHHHHhcchhH
Q psy10286 155 IDAVAMEALINFVYSGRVTIHSQ-NVQSLMVVASFLQMQKV 194 (748)
Q Consensus 155 ~~~~~~~~~l~flYtg~~~i~~~-~v~~ll~~A~~l~i~~l 194 (748)
=++..|+.+|+|+-+|++.+..+ .+..+++-|++|+|+.+
T Consensus 81 Rdp~~F~~ILnflR~G~l~~p~~~~~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 81 RDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPE 121 (140)
T ss_dssp SCHHHHHHHHHHHHHSSBCCCTTSCHHHHHHHHHHHTCCGG
T ss_pred CCcHHHHHHHHHHhcCCcCCCCCcCHHHHHHHHHHcCCChH
Confidence 59999999999999999987655 48889999999999987
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.51 E-value=1.7 Score=48.07 Aligned_cols=119 Identities=13% Similarity=0.168 Sum_probs=72.2
Q ss_pred EEEECCEEEEEeCCCCCCCCceEEEEeC-CCCe--EEEccCCCCC--------CcceEEEEECCEEEEEccCCCCcccCe
Q psy10286 551 AAALNDKLYVCGGYDGVSSLNTVECYEP-DKDQ--WRIVKSMQKH--------RSAGGVIAFDSYVYALGGHDGLSIFDS 619 (748)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~-~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 619 (748)
-++.++.+|+.+.. ...++.+|. .+.+ |+.-...+.. ....+.++.+++||+.... ..
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------g~ 126 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN------GH 126 (571)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT------SE
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC------CE
Confidence 34569999997652 246899998 6654 9876443211 1123456779999987542 46
Q ss_pred EEEEECCCC--cEEEccCC-CCC-CcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc--EEEc
Q psy10286 620 VERYDPKTD--EWTSVKPM-LTK-RCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE--WKMI 680 (748)
Q Consensus 620 ~~~yd~~~~--~W~~~~~~-p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~ 680 (748)
++.+|..+. .|+.-..- +.. ....+.++.++.+|+..+.........++.||.++.+ |+.-
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 999999877 58754221 111 1122334568888775432111123579999998764 8753
No 261
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=94.42 E-value=0.022 Score=46.58 Aligned_cols=85 Identities=15% Similarity=0.171 Sum_probs=57.8
Q ss_pred EEEEECCeEEeeeeeeeeccC-HHHHHhhcccccccccceeeeecchheehhhccccccccccccccccccceeeeecCC
Q psy10286 77 VTIKVDDQSFTCHRIVLAATI-PYFQAMFTSDMAESKQREITMQGIDAVIVLAATIPYFQAMFTSDMAESKQREITMQGI 155 (748)
Q Consensus 77 v~i~~~~~~~~aHk~iL~a~S-~~F~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 155 (748)
|+|.|+|+.|...+..|+..- ..+.+|+.+... -.....++-+ +=
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~---------------------------------~~~~~~eyFi-DR 48 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRY---------------------------------YDPLRNEYFF-DR 48 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGG---------------------------------EETTTTEEEE-CS
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccc---------------------------------cCCCceeEEE-cC
Confidence 688999999999999885431 122233321000 0011222323 56
Q ss_pred CHHHHHHHHHhhhc-eeEEeech-hHHHHHHHHHHhcchhHH
Q psy10286 156 DAVAMEALINFVYS-GRVTIHSQ-NVQSLMVVASFLQMQKVA 195 (748)
Q Consensus 156 ~~~~~~~~l~flYt-g~~~i~~~-~v~~ll~~A~~l~i~~l~ 195 (748)
++..|+.+|+|+-+ |++.++.+ .+..+++-|++|+|+++.
T Consensus 49 dp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 49 NRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEIKFYELGENA 90 (100)
T ss_dssp CSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHHHHTTCCHHH
T ss_pred ChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 89999999999999 89977655 578899999999998855
No 262
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.40 E-value=0.26 Score=52.60 Aligned_cols=187 Identities=14% Similarity=0.052 Sum_probs=96.0
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCC-CCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPM-CFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWR 584 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~-~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 584 (748)
++.+.+.|+.++ .+..||..+......-.. .....-.+++.. ++..++.||.+ ..+-+||..++...
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-----~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-----GTTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-----SCEEEEETTSCEEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-----CEEEEeeccCCcee
Confidence 455777787553 577888876643332221 122222333432 56677778765 35788899887765
Q ss_pred EccCCCCCC-cceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE---CCEEEEEeccC
Q psy10286 585 IVKSMQKHR-SAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL---NNKIYVCGGYD 659 (748)
Q Consensus 585 ~~~~~~~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~ 659 (748)
......... ...++.. -++.+++.|+.++ .+..+|..... +..+.........+.+ ++.+++.||.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 553322211 1222333 3677778887644 58888876543 2222221222233333 34577777755
Q ss_pred CCccccEEEEEeCCCCcEEE-ccCCCCCCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 660 GAIFLQSVEMYDPITDEWKM-IASMNVMRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
+ .|.+||..+.+-.. +...........++.+ +++.++.||.++ .|.+||..+.
T Consensus 273 ~-----~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~-----~i~iwd~~~~ 328 (435)
T 4e54_B 273 Q-----TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS-----EIRVYSASQW 328 (435)
T ss_dssp S-----BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS-----CEEEEESSSS
T ss_pred c-----eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC-----EEEEEECCCC
Confidence 3 46678876543211 1000101111122222 566777777543 4777777653
No 263
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.32 E-value=2.2 Score=48.37 Aligned_cols=118 Identities=15% Similarity=0.246 Sum_probs=73.9
Q ss_pred EEEECCEEEEEeCCCCCCCCceEEEEeCCCCe--EEEccCCCCC--------CcceEEEEECCEEEEEccCCCCcccCeE
Q psy10286 551 AAALNDKLYVCGGYDGVSSLNTVECYEPDKDQ--WRIVKSMQKH--------RSAGGVIAFDSYVYALGGHDGLSIFDSV 620 (748)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 620 (748)
-++.++.||+... ...++.+|..+.+ |+.-...+.. ....+.++.+++||+.... ..+
T Consensus 73 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d------g~l 140 (677)
T 1kb0_A 73 PVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD------GRL 140 (677)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT------SEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC------CEE
Confidence 3457999998765 2578999988775 8876543311 1223456678999986432 469
Q ss_pred EEEECCCCc--EEEccC-CCC--CCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc--EEEc
Q psy10286 621 ERYDPKTDE--WTSVKP-MLT--KRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE--WKMI 680 (748)
Q Consensus 621 ~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~ 680 (748)
+.+|..+.+ |+.-.. -+. .....+.++.++.+|+..+.........++.||..+.+ |+.-
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 999998764 876432 111 11223345568888775542222234689999998765 8764
No 264
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.25 E-value=4.1 Score=40.79 Aligned_cols=186 Identities=13% Similarity=0.144 Sum_probs=95.3
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK 587 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 587 (748)
++...+.|+.+ ..+..++........................++..++.|+.+ ..+..||.....-....
T Consensus 97 dg~~l~s~~~d-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~~~~~d~~~~~~~~~~ 166 (340)
T 4aow_A 97 DGQFALSGSWD-----GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-----KTIKLWNTLGVCKYTVQ 166 (340)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEEC
T ss_pred CCCEEEEEccc-----ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC-----CeEEEEEeCCCceEEEE
Confidence 56777777754 357788888776554433332222222222355666677654 34567776654432222
Q ss_pred CCCCCCcceEEEEE----CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCC
Q psy10286 588 SMQKHRSAGGVIAF----DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGA 661 (748)
Q Consensus 588 ~~~~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 661 (748)
.... ......+.+ .+.+++.||.++ .+..||..+.+....-.. ......++.+ ++++++.||.+
T Consensus 167 ~~~~-~~~v~~~~~~~~~~~~~~~s~~~d~-----~i~i~d~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~D-- 236 (340)
T 4aow_A 167 DESH-SEWVSCVRFSPNSSNPIIVSCGWDK-----LVKVWNLANCKLKTNHIG--HTGYLNTVTVSPDGSLCASGGKD-- 236 (340)
T ss_dssp SSSC-SSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEEETT--
T ss_pred eccc-cCcccceEEccCCCCcEEEEEcCCC-----EEEEEECCCCceeeEecC--CCCcEEEEEECCCCCEEEEEeCC--
Confidence 1111 111122222 234566666543 578889887765432111 1111222233 57788888765
Q ss_pred ccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 662 IFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 662 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
..+.+||..+.+-.. .+.....-..+....+..++.||.+ ..+.+||.++..
T Consensus 237 ---g~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~ 288 (340)
T 4aow_A 237 ---GQAMLWDLNEGKHLY--TLDGGDIINALCFSPNRYWLCAATG-----PSIKIWDLEGKI 288 (340)
T ss_dssp ---CEEEEEETTTTEEEE--EEECSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTE
T ss_pred ---CeEEEEEeccCceee--eecCCceEEeeecCCCCceeeccCC-----CEEEEEECCCCe
Confidence 368889987654322 2222222223333344455556543 368888887764
No 265
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.19 E-value=4.6 Score=40.76 Aligned_cols=187 Identities=10% Similarity=0.050 Sum_probs=97.7
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEE-ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAA-LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
++.+|+++... ..+++||+.+++..... .+. .-.+.+. -+|++|+... ..+++||+.+++++.+
T Consensus 60 ~~~l~~~d~~~-----~~i~~~d~~~~~~~~~~-~~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 60 SGTAWWFNILE-----RELHELHLASGRKTVHA-LPF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLH 124 (326)
T ss_dssp TTEEEEEEGGG-----TEEEEEETTTTEEEEEE-CSS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEE
T ss_pred CCEEEEEECCC-----CEEEEEECCCCcEEEEE-CCC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEE
Confidence 36788876432 47899999988765443 221 2223333 3788887642 3599999999988776
Q ss_pred cCCCCC----CcceEEEEECCEEEEEccC-CCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CC-EEEEEeccC
Q psy10286 587 KSMQKH----RSAGGVIAFDSYVYALGGH-DGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NN-KIYVCGGYD 659 (748)
Q Consensus 587 ~~~~~~----r~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~ 659 (748)
...+.. +....++.-+|++|+.... ........+++|| +.+...+.. ......+.+.- ++ .+|+....
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~- 199 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFVDTK- 199 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEEETT-
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEEECC-
Confidence 543321 1112222226778764321 1111235799999 456554421 00111233322 34 57776532
Q ss_pred CCccccEEEEEeCC--CC-c------EEEccCCCCCCcceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 660 GAIFLQSVEMYDPI--TD-E------WKMIASMNVMRSRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 660 ~~~~~~~v~~yd~~--~~-~------W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
.+.|++||.. +. . +..+... ...-.+++.- +|.+|+.... ...+.+||+....-.
T Consensus 200 ----~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~--~~~p~gi~~d~~G~lwva~~~-----~~~v~~~d~~g~~~~ 264 (326)
T 2ghs_A 200 ----VNRLMRVPLDARTGLPTGKAEVFIDSTGI--KGGMDGSVCDAEGHIWNARWG-----EGAVDRYDTDGNHIA 264 (326)
T ss_dssp ----TCEEEEEEBCTTTCCBSSCCEEEEECTTS--SSEEEEEEECTTSCEEEEEET-----TTEEEEECTTCCEEE
T ss_pred ----CCEEEEEEcccccCCcccCceEEEECCCC--CCCCCeeEECCCCCEEEEEeC-----CCEEEEECCCCCEEE
Confidence 2578999875 43 2 2222110 1111222222 5778876421 136888998544333
No 266
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=94.19 E-value=0.0093 Score=53.90 Aligned_cols=56 Identities=11% Similarity=0.294 Sum_probs=33.4
Q ss_pred hhhhHHHHHHHhhccee---------------------------EEEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCC
Q psy10286 218 FSCRAMEALINFAYSGR---------------------------VTIHSQNVQSLMVVASFLQMQKVADACADFLKKRFH 270 (748)
Q Consensus 218 ~~~~~~~~ll~~~y~~~---------------------------~~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~ 270 (748)
.+...|+.+++|+|... +.+...++.+|+.+|++|++..|.+.|++++...+.
T Consensus 47 V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 126 (160)
T 2p1m_A 47 VTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIK 126 (160)
T ss_dssp SCHHHHHHHHHC------------------------------------------CHHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred CcHHHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 34567777888887754 356778889999999999999999999999988774
Q ss_pred CCC
Q psy10286 271 PNN 273 (748)
Q Consensus 271 ~~n 273 (748)
-.+
T Consensus 127 gkt 129 (160)
T 2p1m_A 127 GKT 129 (160)
T ss_dssp TCC
T ss_pred CCC
Confidence 444
No 267
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.17 E-value=0.7 Score=46.64 Aligned_cols=189 Identities=16% Similarity=0.188 Sum_probs=94.8
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC-CcceeEEEEE---CCEEEEEeCCCCCCCCceEEEEeCCCCeE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF-KRSAVGAAAL---NDKLYVCGGYDGVSSLNTVECYEPDKDQW 583 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~-~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 583 (748)
++...+.||.+ ..+..||..++....+..+.. ...-.+++.. ++.+++.||.+ ..+..||..+..|
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-----RKVIIWREENGTW 93 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-----SCEEEECCSSSCC
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-----CEEEEEECCCCcc
Confidence 45666777744 467778877765433322211 1111223322 26677777765 4678899888776
Q ss_pred EEccCCCCCCcc-eEEEEE-C--CEEEEEccCCCCcccCeEEEEECCCC-cEEEccCCCCCCcceeEEEE----------
Q psy10286 584 RIVKSMQKHRSA-GGVIAF-D--SYVYALGGHDGLSIFDSVERYDPKTD-EWTSVKPMLTKRCRLGVAAL---------- 648 (748)
Q Consensus 584 ~~~~~~~~~r~~-~~~~~~-~--~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~---------- 648 (748)
.....+...... .+++.. + +.+++.|+.++ .+..+|..+. .|...............+.+
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 544333222111 222222 2 56777777654 4677777655 57543322111111111111
Q ss_pred ---------CCEEEEEeccCCCccccEEEEEeCC-CCcEEEccCCCCCCcceEEEEE--C----CEEEEEeCCCCCCCCC
Q psy10286 649 ---------NNKIYVCGGYDGAIFLQSVEMYDPI-TDEWKMIASMNVMRSRVALVAN--M----GKLWAIGGYDGVSNLP 712 (748)
Q Consensus 649 ---------~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~----~~l~v~GG~~~~~~~~ 712 (748)
.++.++.||.++ .+.+||.. ...|..+..+.........+.. + +.+++.|+.++
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~----- 238 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCDN-----LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG----- 238 (316)
T ss_dssp --CCSCCCCCCCBEECCBTTS-----BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC-----
T ss_pred ccccccCccccceEEEecCCC-----eEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC-----
Confidence 134666776543 45666665 3457666544332222222332 2 25666666442
Q ss_pred eEEEEeCCC
Q psy10286 713 TVEVYDPST 721 (748)
Q Consensus 713 ~v~~yd~~~ 721 (748)
.+.+||..+
T Consensus 239 ~v~iw~~~~ 247 (316)
T 3bg1_A 239 RVFIWTCDD 247 (316)
T ss_dssp EEEEEECSS
T ss_pred eEEEEEccC
Confidence 567777654
No 268
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=94.17 E-value=8.4 Score=46.04 Aligned_cols=102 Identities=14% Similarity=0.014 Sum_probs=57.7
Q ss_pred CeEE-EEECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEE
Q psy10286 618 DSVE-RYDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVA 694 (748)
Q Consensus 618 ~~~~-~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 694 (748)
..++ .||..+.+...+. ... .....+.+ +++.+++++.+ ..++++|..+.+-..+..-........+..
T Consensus 358 ~~l~~~~d~~~~~~~~l~--~~~-~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE--ENL-GNVFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTIS 429 (1045)
T ss_dssp EEEEEEEETTTCCEEECC--CCC-CSEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEEC
T ss_pred CceEEEEECCCCCceEec--CCc-cceeeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCccceEEC
Confidence 3688 8898887766654 111 12222233 56666666543 489999999887766532222221222222
Q ss_pred ECCEEEEEeCCCC-----CCCCCeEEEEeCCCCceEec
Q psy10286 695 NMGKLWAIGGYDG-----VSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 695 ~~~~l~v~GG~~~-----~~~~~~v~~yd~~~~~W~~~ 727 (748)
-+++.+++++.+. ......++++|..++....+
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe
Confidence 3666666655432 11234789999988775544
No 269
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.16 E-value=6.1 Score=43.48 Aligned_cols=285 Identities=12% Similarity=0.046 Sum_probs=146.4
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCC--CCcee-ecccccccce-EEe-----cccccccCCCccceEEEEeCCCCceEE
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPL--VGRWQ-MAEEETLSNA-VIS-----TKSCLTKAGDSLSTVEVFDPLVGRWQM 491 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~--~~~W~-~~~~~~~~~~-~~~-----~~~~~~~~g~~~~~~~~yd~~~~~W~~ 491 (748)
+..+|+.+. ...+..||.. +.+-. .+........ .++ .+..++......+.+..+|..+.+=..
T Consensus 208 Gr~lyv~~~-------dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~ 280 (567)
T 1qks_A 208 GRYLFVIGR-------DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKK 280 (567)
T ss_dssp SCEEEEEET-------TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEE
T ss_pred CCEEEEEcC-------CCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEE
Confidence 456777542 1368899985 43221 1111111122 233 233455544445678889987765432
Q ss_pred c-c--CC--------CcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CC-EE
Q psy10286 492 A-E--AM--------SMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-ND-KL 558 (748)
Q Consensus 492 ~-~--~~--------~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~i 558 (748)
. + .+ |.+|...-.+..++..+++-- .....++..|..+.....+..++.++.-|....- ++ ++
T Consensus 281 ~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~ 356 (567)
T 1qks_A 281 IQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYF 356 (567)
T ss_dssp EEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEE
T ss_pred EEeccccccccccccCCCceEEEEEcCCCCEEEEEe----cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEE
Confidence 2 1 11 122332222222333333321 1235788899887766555556666776766554 44 45
Q ss_pred EEEeCCCCCCCCceEEEEeCCCCeEEEc----cCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCc---
Q psy10286 559 YVCGGYDGVSSLNTVECYEPDKDQWRIV----KSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDE--- 629 (748)
Q Consensus 559 yv~GG~~~~~~~~~~~~yd~~~~~W~~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~--- 629 (748)
|+... ..+.+.++|..+++=... ...|.+..+.. ... ++.+|+.+-.. ...+..+|..+..
T Consensus 357 ~va~~-----~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~-~~~p~~g~v~~t~~~g----~~~Vsvid~~~~~~~~ 426 (567)
T 1qks_A 357 ITAAN-----ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN-FVHPTFGPVWATSHMG----DDSVALIGTDPEGHPD 426 (567)
T ss_dssp EEEEG-----GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-EEETTTEEEEEEEBSS----SSEEEEEECCTTTCTT
T ss_pred EEEeC-----CCCeEEEEECCCCcEEEEEeccCcCCCCcccee-eECCCCCcEEEeCCCC----CCeEEEecCCCCCCcc
Confidence 55433 236799999998863322 23344433332 233 36788765321 2468888877633
Q ss_pred --EEEccCCCCCCcc-eeEEEE--CCEEEEEeccCCC-ccccEEEEEeCCCC-------cEEEcc-----CCC--CCCcc
Q psy10286 630 --WTSVKPMLTKRCR-LGVAAL--NNKIYVCGGYDGA-IFLQSVEMYDPITD-------EWKMIA-----SMN--VMRSR 689 (748)
Q Consensus 630 --W~~~~~~p~~r~~-~~~~~~--~~~i~v~GG~~~~-~~~~~v~~yd~~~~-------~W~~~~-----~~p--~~r~~ 689 (748)
|+.+..++....+ ..+... +..+||---.+.. ...++|.+||..+. .+..++ .++ ..|..
T Consensus 427 ~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 506 (567)
T 1qks_A 427 NAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 506 (567)
T ss_dssp TBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE
T ss_pred ccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE
Confidence 8777655433221 222233 3467775422211 12468999998765 234442 232 22333
Q ss_pred eEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCCceEec
Q psy10286 690 VALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 690 ~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (748)
|....- +.++|+--+ ++....+.|.+||.+|.+-...
T Consensus 507 ~~~~~~~G~~~~~s~~-~~~~~~~~i~v~D~~t~~~~~~ 544 (567)
T 1qks_A 507 QGEFNKDGTEVWFSVW-NGKDQESALVVVDDKTLELKHV 544 (567)
T ss_dssp EEEECTTSSEEEEEEE-CCTTSCCEEEEEETTTTEEEEE
T ss_pred eeeECCCCCEEEEEee-cCCCCCCcEEEEECCCceEEEE
Confidence 332222 567887622 2222346899999988765543
No 270
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.08 E-value=1.6 Score=43.65 Aligned_cols=216 Identities=13% Similarity=0.059 Sum_probs=106.6
Q ss_pred CccceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCC-c--cee
Q psy10286 474 DSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFK-R--SAV 549 (748)
Q Consensus 474 ~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~-r--~~~ 549 (748)
.....+++|++ +++........ ..-.+++.. +|++|+.... ...+.+||+. ++.+.+...... + .-.
T Consensus 64 ~~~~~i~~~~~-~g~~~~~~~~~--~~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~ 134 (305)
T 3dr2_A 64 LVGRRVLGWRE-DGTVDVLLDAT--AFTNGNAVDAQQRLVHCEHG-----RRAITRSDAD-GQAHLLVGRYAGKRLNSPN 134 (305)
T ss_dssp TTTTEEEEEET-TSCEEEEEESC--SCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECEETTEECSCCC
T ss_pred CCCCEEEEEeC-CCCEEEEeCCC--CccceeeECCCCCEEEEECC-----CCEEEEECCC-CCEEEEEeccCCCccCCCC
Confidence 33456888888 44443332111 111233332 6788876421 2468889986 556554321111 1 111
Q ss_pred EEEE-ECCEEEEE----eCCC---C-----CCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CC-EEEEEccCCCC
Q psy10286 550 GAAA-LNDKLYVC----GGYD---G-----VSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DS-YVYALGGHDGL 614 (748)
Q Consensus 550 ~~~~-~~~~iyv~----GG~~---~-----~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~ 614 (748)
.++. -+|.+|+. |-.. + ......+++||+.+++++.+..+ . .-.+.+.. ++ .+|+.......
T Consensus 135 ~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~--~-~p~gl~~spdg~~lyv~~~~~~~ 211 (305)
T 3dr2_A 135 DLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADL--D-HPNGLAFSPDEQTLYVSQTPEQG 211 (305)
T ss_dssp CEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEE--S-SEEEEEECTTSSEEEEEECCC--
T ss_pred CEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecC--C-CCcceEEcCCCCEEEEEecCCcC
Confidence 2333 37889985 3221 0 11236799999988887765411 1 11233333 34 58876543211
Q ss_pred cccCeEEEEECCCCcEEEc---cCCCCCCcceeEEE-ECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcce
Q psy10286 615 SIFDSVERYDPKTDEWTSV---KPMLTKRCRLGVAA-LNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRV 690 (748)
Q Consensus 615 ~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 690 (748)
.....+++||...+..... ...+. ..-.+++. -+|.||+..+ +.|.+||++......+.. +.. -.
T Consensus 212 ~~~~~i~~~~~~~~~l~~~~~~~~~~~-~~pdgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~~~-~~~--~~ 280 (305)
T 3dr2_A 212 HGSVEITAFAWRDGALHDRRHFASVPD-GLPDGFCVDRGGWLWSSSG-------TGVCVFDSDGQLLGHIPT-PGT--AS 280 (305)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEECCSS-SCCCSEEECTTSCEEECCS-------SEEEEECTTSCEEEEEEC-SSC--CC
T ss_pred CCCCEEEEEEecCCCccCCeEEEECCC-CCCCeEEECCCCCEEEecC-------CcEEEECCCCCEEEEEEC-CCc--ee
Confidence 1125799999876543211 11111 11122333 2567777652 359999997665555432 221 12
Q ss_pred EEEE--ECCEEEEEeCCCCCCCCCeEEEEeC
Q psy10286 691 ALVA--NMGKLWAIGGYDGVSNLPTVEVYDP 719 (748)
Q Consensus 691 ~~~~--~~~~l~v~GG~~~~~~~~~v~~yd~ 719 (748)
.++. -++.||+... ..++.++.
T Consensus 281 ~~~f~~d~~~L~it~~-------~~l~~~~~ 304 (305)
T 3dr2_A 281 NCTFDQAQQRLFITGG-------PCLWMLPL 304 (305)
T ss_dssp EEEECTTSCEEEEEET-------TEEEEEEC
T ss_pred EEEEeCCCCEEEEEcC-------CeEEEEEC
Confidence 2222 2356777643 25666654
No 271
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.92 E-value=0.55 Score=48.45 Aligned_cols=188 Identities=14% Similarity=0.148 Sum_probs=90.4
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCC---CCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPM---CFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQW 583 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~---~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 583 (748)
++.++ .|+.+ ..+..||..+++-...... .....-.+++.. +++.++.|+.+ ..+..||..+++-
T Consensus 105 d~~~l-~~s~d-----g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-----g~v~iwd~~~~~~ 173 (357)
T 4g56_B 105 EKGIL-VASDS-----GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-----FSVKVWDLSQKAV 173 (357)
T ss_dssp TTEEE-EEETT-----SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTTEE
T ss_pred CCCEE-EEECC-----CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 45544 45533 3577888776542221111 111111222222 67777888765 3578899888764
Q ss_pred EEccCCCCCCcce-EEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE---CCEEEEEec
Q psy10286 584 RIVKSMQKHRSAG-GVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL---NNKIYVCGG 657 (748)
Q Consensus 584 ~~~~~~~~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG 657 (748)
... +......- +++.. ++.+++.||.++ .+..||..+.+-...............+.+ ++.+++.|+
T Consensus 174 ~~~--~~~h~~~v~~v~~s~~~~~~~~s~~~dg-----~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 174 LKS--YNAHSSEVNCVAACPGKDTIFLSCGEDG-----RILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp EEE--ECCCSSCEEEEEECTTCSSCEEEEETTS-----CEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred EEE--EcCCCCCEEEEEEccCCCceeeeeccCC-----ceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee
Confidence 332 11111111 22222 335777777644 578888877653322222222222233333 456788887
Q ss_pred cCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--C-CEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 658 YDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--M-GKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
.+ ..|.+||..+.+- +..+.........+.+ + +++++.|+.++ .|.+||..+++..
T Consensus 247 ~d-----~~i~~wd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~-----~i~iwd~~~~~~~ 305 (357)
T 4g56_B 247 ET-----GNVSLVNIKNPDS--AQTSAVHSQNITGLAYSYHSSPFLASISEDC-----TVAVLDADFSEVF 305 (357)
T ss_dssp SS-----SCEEEEESSCGGG--CEEECCCSSCEEEEEECSSSSCCEEEEETTS-----CEEEECTTSCEEE
T ss_pred cc-----cceeEEECCCCcE--eEEEeccceeEEEEEEcCCCCCEEEEEeCCC-----EEEEEECCCCcEe
Confidence 54 3588899876431 1111111122222322 3 46666776543 5889998877543
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=93.85 E-value=6.6 Score=40.13 Aligned_cols=212 Identities=11% Similarity=0.077 Sum_probs=120.8
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEcc--CCCCCcceeEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVS--PMCFKRSAVGAA 552 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~--~~~~~r~~~~~~ 552 (748)
..+..+++.......+..- ...-.+++.. ++.||+.-- ....++++++.....+.+. .+..+ .+.+
T Consensus 53 ~~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p---~gla 122 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP---GGLA 122 (349)
T ss_dssp SCEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCSCC---CEEE
T ss_pred cceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEec-----cCCceEEEecCCCCceEEEeCCCCCc---cEEE
Confidence 4577888877766654321 1223444443 688998753 2357999999876544432 22222 2344
Q ss_pred E--ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc--CCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECC
Q psy10286 553 A--LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK--SMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPK 626 (748)
Q Consensus 553 ~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 626 (748)
+ .++.||+.-.. .+.++++++....-..+. .+..| .++++. ++.||+..... ...++++++.
T Consensus 123 vd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~d 190 (349)
T 3v64_C 123 VDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMD 190 (349)
T ss_dssp EETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred EecCCCeEEEEcCC-----CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCC
Confidence 4 37899988542 357888988765433332 22223 234443 78999876432 3579999987
Q ss_pred CCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeC
Q psy10286 627 TDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGG 704 (748)
Q Consensus 627 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG 704 (748)
...-+.+..-.. ..-.+.+.- +++||+.-.. .+.|+.+|+....-..+..... ..-.++++.++.||+.--
T Consensus 191 G~~~~~~~~~~~-~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~~~~-~~P~giav~~~~ly~td~ 263 (349)
T 3v64_C 191 GSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQGL-PHPFAITVFEDSLYWTDW 263 (349)
T ss_dssp SCSCEESCCSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSC-SSEEEEEEETTEEEEEET
T ss_pred CCCcEEEEECCC-CCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEeCCC-CCceEEEEECCEEEEecC
Confidence 655444422111 112344443 7899998642 3689999987543333221111 122455667899999853
Q ss_pred CCCCCCCCeEEEEeCCCC
Q psy10286 705 YDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~ 722 (748)
. ...|..+|..++
T Consensus 264 ~-----~~~V~~~~~~~G 276 (349)
T 3v64_C 264 H-----TKSINSANKFTG 276 (349)
T ss_dssp T-----TTEEEEEETTTC
T ss_pred C-----CCeEEEEEccCC
Confidence 2 245777775443
No 273
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.82 E-value=1.9 Score=44.55 Aligned_cols=174 Identities=8% Similarity=-0.020 Sum_probs=94.4
Q ss_pred ceEEEEeCCCCceEEccCCC-cccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcc-eeEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMS-MLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRS-AVGAA 552 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~-~~~~~ 552 (748)
..+..||..+.+....-... ....-.+++.. ++.+++.|+.+ ..+..||..+.............. -.+++
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 170 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVFAKTDSWDYWYCCVD 170 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEEECCCCSSCCEEEEE
T ss_pred CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEEeccCCCCCCeEEEE
Confidence 46888898887766554332 22222334443 34677777644 468889998877665543322111 22222
Q ss_pred EE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCE-EEEEccCCCCcccCeEEEEECCC--
Q psy10286 553 AL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSY-VYALGGHDGLSIFDSVERYDPKT-- 627 (748)
Q Consensus 553 ~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~-- 627 (748)
.. ++..++.|+.+ ..+..||.....-..+..-. ..-.+++.. ++. +++.|+.++ .+..||..+
T Consensus 171 ~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~ 238 (383)
T 3ei3_B 171 VSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLHK--AKVTHAEFNPRCDWLMATSSVDA-----TVKLWDLRNIK 238 (383)
T ss_dssp EETTTTEEEEEETT-----SEEEEEETTSCEEEEEECSS--SCEEEEEECSSCTTEEEEEETTS-----EEEEEEGGGCC
T ss_pred ECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccCC--CcEEEEEECCCCCCEEEEEeCCC-----EEEEEeCCCCC
Confidence 22 66777777754 47888998654433332111 111222222 344 777777643 688888876
Q ss_pred --CcEEEccCCCCCCcceeEEEE---CCEEEEEeccCCCccccEEEEEeCCCC
Q psy10286 628 --DEWTSVKPMLTKRCRLGVAAL---NNKIYVCGGYDGAIFLQSVEMYDPITD 675 (748)
Q Consensus 628 --~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~ 675 (748)
....... .... ....+.+ ++..++.|+.+ ..+.+||..+.
T Consensus 239 ~~~~~~~~~--~~~~-~v~~~~~s~~~~~~l~~~~~d-----~~i~iwd~~~~ 283 (383)
T 3ei3_B 239 DKNSYIAEM--PHEK-PVNAAYFNPTDSTKLLTTDQR-----NEIRVYSSYDW 283 (383)
T ss_dssp STTCEEEEE--ECSS-CEEEEEECTTTSCEEEEEESS-----SEEEEEETTBT
T ss_pred cccceEEEe--cCCC-ceEEEEEcCCCCCEEEEEcCC-----CcEEEEECCCC
Confidence 3332221 1111 2222222 56677777754 47888887654
No 274
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.70 E-value=7.2 Score=44.59 Aligned_cols=240 Identities=15% Similarity=0.061 Sum_probs=119.9
Q ss_pred ceEEEEeCC---CCceEEccCCCc---cc-ceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcc
Q psy10286 477 STVEVFDPL---VGRWQMAEAMSM---LR-SRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRS 547 (748)
Q Consensus 477 ~~~~~yd~~---~~~W~~~~~~~~---~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~ 547 (748)
..+|+.+.. .+.|+.+-+... .. .......+ +|+..+++...++.....++++|..+++..... .+....
T Consensus 133 ~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~ 211 (741)
T 1yr2_A 133 SQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKF 211 (741)
T ss_dssp CEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEES
T ss_pred EEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCcee
Confidence 456777765 566766532221 11 11122222 666555554333323357999999998875431 111110
Q ss_pred eeEEEEE-CCEEEEEeCCCCC---------CCCceEEEEeCCCCeE--EEccCCCC-CCcceEEEE-ECCE-EEEEccCC
Q psy10286 548 AVGAAAL-NDKLYVCGGYDGV---------SSLNTVECYEPDKDQW--RIVKSMQK-HRSAGGVIA-FDSY-VYALGGHD 612 (748)
Q Consensus 548 ~~~~~~~-~~~iyv~GG~~~~---------~~~~~~~~yd~~~~~W--~~~~~~~~-~r~~~~~~~-~~~~-iyv~GG~~ 612 (748)
.+.+.. ++.|| ++..++. .....++.++..+..- ..+-..+. +........ -+|+ |++... +
T Consensus 212 -~~~~wspD~~l~-~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~-~ 288 (741)
T 1yr2_A 212 -SGLAWLGNDALL-YSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSS-E 288 (741)
T ss_dssp -CCCEESTTSEEE-EEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE-C
T ss_pred -ccEEEECCCEEE-EEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEE-c
Confidence 112222 43344 3333221 1245688888766541 12211111 222222222 2554 444443 2
Q ss_pred CCcccCeEEEEECCCC--c-EEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCC--CcEEEccCCCCCC
Q psy10286 613 GLSIFDSVERYDPKTD--E-WTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPIT--DEWKMIASMNVMR 687 (748)
Q Consensus 613 ~~~~~~~~~~yd~~~~--~-W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~r 687 (748)
+....+.++.+|..+. . |..+........ ......++.||+....+ .....++.+|..+ ..|+.+-+-...
T Consensus 289 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~- 364 (741)
T 1yr2_A 289 GTDPVNTVHVARVTNGKIGPVTALIPDLKAQW-DFVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPESKD- 364 (741)
T ss_dssp TTCSCCEEEEEEEETTEECCCEEEECSSSSCE-EEEEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCCSS-
T ss_pred cCCCcceEEEEECCCCCCcccEEecCCCCceE-EEEeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecCCCC-
Confidence 2223568999998877 6 877753322221 22234467787776432 2246799999887 579887432211
Q ss_pred cceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceEec
Q psy10286 688 SRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 688 ~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (748)
.-..+...++++++....++. ..++++|+..+.-+.+
T Consensus 365 ~l~~~~~~~~~lv~~~~~dg~---~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 365 NLESVGIAGNRLFASYIHDAK---SQVLAFDLDGKPAGAV 401 (741)
T ss_dssp EEEEEEEEBTEEEEEEEETTE---EEEEEEETTSCEEEEC
T ss_pred eEEEEEEECCEEEEEEEECCE---EEEEEEeCCCCceeec
Confidence 112334448888887654432 4678888755544433
No 275
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=93.64 E-value=4.4 Score=41.05 Aligned_cols=136 Identities=13% Similarity=0.082 Sum_probs=62.9
Q ss_pred CCCccceEEEEeCCCCceEE-ccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCccee
Q psy10286 472 AGDSLSTVEVFDPLVGRWQM-AEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAV 549 (748)
Q Consensus 472 ~g~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~ 549 (748)
.|..-..+..+|..+++... +..- ...-.+++.. ++..++.||.+ ..+..||.....-............-
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h--~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGH--QSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGECKFSSAEKENHSDWV 165 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECC--CSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCEEEECCTTTSCSSCE
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCC--CCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCceeeeecccCCCcee
Confidence 33334578889988776432 2111 1111222222 56666777754 35777887654332222211111111
Q ss_pred EEEEE--CC----------EEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEE-ECCEEEEEccCCCCcc
Q psy10286 550 GAAAL--ND----------KLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIA-FDSYVYALGGHDGLSI 616 (748)
Q Consensus 550 ~~~~~--~~----------~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~ 616 (748)
.++.. ++ ..++.||.+ ..+..||.....-..... ....-.+++. -+++.++.||.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~--h~~~v~~~~~s~~g~~l~sgs~dg--- 235 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNFQIRYTFKA--HESNVNHLSISPNGKYIATGGKDK--- 235 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTTEEEEEEEC--CSSCEEEEEECTTSSEEEEEETTC---
T ss_pred eeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCCceeEEEcC--ccccceEEEECCCCCEEEEEcCCC---
Confidence 22222 11 456667654 357777743321111111 0111112222 2667777777643
Q ss_pred cCeEEEEECC
Q psy10286 617 FDSVERYDPK 626 (748)
Q Consensus 617 ~~~~~~yd~~ 626 (748)
.+..||..
T Consensus 236 --~v~iwd~~ 243 (343)
T 2xzm_R 236 --KLLIWDIL 243 (343)
T ss_dssp --EEEEEESS
T ss_pred --eEEEEECC
Confidence 57788874
No 276
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=93.64 E-value=5.1 Score=40.54 Aligned_cols=150 Identities=17% Similarity=0.220 Sum_probs=77.6
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEE--
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWT-- 631 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-- 631 (748)
++..++.|+.+ ..+..||..+.+-...........-.+++.. ++.+++.|+.++ .+..||..+.+-.
T Consensus 138 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg-----~i~iwd~~~~~~~~~ 207 (343)
T 3lrv_A 138 NTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG-----ILDVYNLSSPDQASS 207 (343)
T ss_dssp -CCEEEEEETT-----CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS-----CEEEEESSCTTSCCE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCCCCcc
Confidence 56677778755 3678899888775433322222122233333 678888888754 6889998876532
Q ss_pred EccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEE-EccCCC---CCCcceEEEEE-CCEEEEEeC
Q psy10286 632 SVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWK-MIASMN---VMRSRVALVAN-MGKLWAIGG 704 (748)
Q Consensus 632 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p---~~r~~~~~~~~-~~~l~v~GG 704 (748)
.+.. . .......+.+ ++..++.|+ + +.+.+||..+.+-. .+..+. .+....+++.. +++.++.|+
T Consensus 208 ~~~~-~-h~~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 208 RFPV-D-EEAKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp ECCC-C-TTSCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred EEec-c-CCCCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence 2211 0 1122223333 566777776 2 26889998765311 111111 01111122222 566666654
Q ss_pred CCCCCCCCeEEEEe--CCCCceEe
Q psy10286 705 YDGVSNLPTVEVYD--PSTDSWAF 726 (748)
Q Consensus 705 ~~~~~~~~~v~~yd--~~~~~W~~ 726 (748)
..+ ..+.+|+ .....|..
T Consensus 280 ~~d----~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 280 NES----NSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp TTT----TEEEEEEECTTTCSEEE
T ss_pred CCC----CcEEEEEEcccccceEe
Confidence 311 2455554 46678986
No 277
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=93.63 E-value=3.7 Score=46.60 Aligned_cols=118 Identities=19% Similarity=0.285 Sum_probs=72.7
Q ss_pred EEEECCEEEEEeCCCCCCCCceEEEEeCCCCe--EEEccCCCCC--------CcceEEEEECCEEEEEccCCCCcccCeE
Q psy10286 551 AAALNDKLYVCGGYDGVSSLNTVECYEPDKDQ--WRIVKSMQKH--------RSAGGVIAFDSYVYALGGHDGLSIFDSV 620 (748)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 620 (748)
-++.++.||+.+. ...++.+|..+.+ |+.-...+.. ....+.++.+++||+... -..+
T Consensus 66 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l 133 (689)
T 1yiq_A 66 PIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGRL 133 (689)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCEE
Confidence 3457999998754 2468999987765 9875443311 112344667899988653 2469
Q ss_pred EEEECCCCc--EEEccC-CCC--CCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc--EEEc
Q psy10286 621 ERYDPKTDE--WTSVKP-MLT--KRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE--WKMI 680 (748)
Q Consensus 621 ~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~ 680 (748)
+.+|..+.+ |+.-.. -+. .....+.++.++.+|+-.+.........++.||.++.+ |+.-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999998774 876542 111 12223345678888774332111234589999998876 8753
No 278
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.60 E-value=13 Score=42.68 Aligned_cols=213 Identities=14% Similarity=0.067 Sum_probs=118.1
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCC----e-EEEcc-CCCCCcce
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRR----V-WNKVS-PMCFKRSA 548 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~----~-W~~~~-~~~~~r~~ 548 (748)
..+..++.....+..+... .+.-.++++. +++||+.-.. ...++++++... . ...+. .+..+
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~--~~~~~gl~~d~~~~~lY~sD~~-----~~~I~~~~l~g~~~~~~~~~vi~~~l~~P--- 473 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP--- 473 (791)
T ss_dssp SSEEEECTTSCCCEEEECS--CSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC---
T ss_pred cceeEeeccCCcceeeecC--CCceEEEeecccCCeeEEeecc-----ceeEEEEeccCCCCCcceeEEEecCCCCc---
Confidence 3566667766666555322 2233444544 6889987642 256888887642 2 22232 22222
Q ss_pred eEEEE--ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc--CCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEE
Q psy10286 549 VGAAA--LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK--SMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVER 622 (748)
Q Consensus 549 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 622 (748)
.++++ .+++||+.-. ....++++++....-+.+. .+..|+ ++++. ++.||+.--.. ...|++
T Consensus 474 ~GLAvD~~~~~LY~tD~-----~~~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g~----~~~I~~ 541 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT----PAKIKK 541 (791)
T ss_dssp CEEEEETTTTEEEEEET-----TTTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECSS----SCEEEE
T ss_pred ceeeeeecCCcEEEEec-----CCCeEEEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCCC----CCeEEE
Confidence 23444 3679999854 2357899998876655543 233332 44443 68999875211 257999
Q ss_pred EECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCC-CCCCcceEEEEECCEE
Q psy10286 623 YDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASM-NVMRSRVALVANMGKL 699 (748)
Q Consensus 623 yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~l 699 (748)
+++....-..+..-.. ..-.++++- +++||+.-.. .+.|+.+|+....=..+..- ..-....++++.+++|
T Consensus 542 ~~~dG~~~~~lv~~~l-~~P~GLavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~l 615 (791)
T 3m0c_C 542 GGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKV 615 (791)
T ss_dssp EETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEE
T ss_pred EecCCCceEEEEeCCC-CCceEEEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEE
Confidence 9987665444422111 111233433 6899998642 36899999876443333211 1112335677789999
Q ss_pred EEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 700 WAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 700 ~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
|+.-. ....|+++|..++
T Consensus 616 YwtD~-----~~~~I~~~dk~tG 633 (791)
T 3m0c_C 616 FWTDI-----INEAIFSANRLTG 633 (791)
T ss_dssp EEEET-----TTTEEEEEETTTC
T ss_pred EEEEC-----CCCEEEEEeCCCC
Confidence 99853 2345666665443
No 279
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.46 E-value=1.8 Score=43.35 Aligned_cols=196 Identities=15% Similarity=0.081 Sum_probs=99.8
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
++.||+.+.. ...+++|++ +.+...... +.. ...+.+.- +|++|+.... ...+.+||+. ++.+.+
T Consensus 56 g~~l~~~d~~-----~~~i~~~~~-~g~~~~~~~-~~~-~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 56 QRTLVWSDLV-----GRRVLGWRE-DGTVDVLLD-ATA-FTNGNAVDAQQRLVHCEHG-----RRAITRSDAD-GQAHLL 121 (305)
T ss_dssp GTEEEEEETT-----TTEEEEEET-TSCEEEEEE-SCS-CEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEE
T ss_pred CCEEEEEECC-----CCEEEEEeC-CCCEEEEeC-CCC-ccceeeECCCCCEEEEECC-----CCEEEEECCC-CCEEEE
Confidence 3457777643 246888988 444433322 111 12233333 6788876431 1468899986 666555
Q ss_pred cCCC-CC---CcceEEEEECCEEEEE----ccCCC--------CcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-C
Q psy10286 587 KSMQ-KH---RSAGGVIAFDSYVYAL----GGHDG--------LSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-N 649 (748)
Q Consensus 587 ~~~~-~~---r~~~~~~~~~~~iyv~----GG~~~--------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~ 649 (748)
.... .. +....++.-+|.+|+. |-... ......+++||+.+.+++.+. ... ...+.+.. +
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~-~p~gl~~spd 198 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD-HPNGLAFSPD 198 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES-SEEEEEECTT
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC-CCcceEEcCC
Confidence 3221 11 1112223337889985 33211 011357999999888877664 111 11233333 3
Q ss_pred C-EEEEEeccCCCccccEEEEEeCCCCcEEE---ccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 650 N-KIYVCGGYDGAIFLQSVEMYDPITDEWKM---IASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 650 ~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~---~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
+ .+|+..........+.+++||...+.... +...+......-++--+|+||+..+ ..|.+||+......
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~~ 271 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG-------TGVCVFDSDGQLLG 271 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS-------SEEEEECTTSCEEE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC-------CcEEEECCCCCEEE
Confidence 4 57777543211123579999987654221 1111111111112223577777642 25899999766555
Q ss_pred ec
Q psy10286 726 FV 727 (748)
Q Consensus 726 ~~ 727 (748)
.+
T Consensus 272 ~~ 273 (305)
T 3dr2_A 272 HI 273 (305)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 280
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.44 E-value=4.2 Score=41.13 Aligned_cols=105 Identities=12% Similarity=0.099 Sum_probs=58.0
Q ss_pred CEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 509 NRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 509 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
+.+++.|+.+ ..+..||..+.+-...-.- ....-.+++.. ++.+++.|+.+ ..+..||..+.+-...
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLVAI 153 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEEEE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEEEE
Confidence 5677778754 3688899887653221110 11112223332 56777888754 4688999988764333
Q ss_pred c-CCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCc
Q psy10286 587 K-SMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDE 629 (748)
Q Consensus 587 ~-~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 629 (748)
- .+.........+.+ ++..++.||.++ .+..||..+.+
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~ 194 (366)
T 3k26_A 154 FGGVEGHRDEVLSADYDLLGEKIMSCGMDH-----SLKLWRINSKR 194 (366)
T ss_dssp ECSTTSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESCSHH
T ss_pred ecccccccCceeEEEECCCCCEEEEecCCC-----CEEEEECCCCc
Confidence 2 11222222222222 466677777643 58888887653
No 281
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.19 E-value=9.5 Score=39.93 Aligned_cols=193 Identities=16% Similarity=0.118 Sum_probs=106.2
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCe-EE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQ-WR 584 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~ 584 (748)
++.||+.... ...+.++|+.+++-..+.... ...+ .+.. ++.+|+.....+ ..++.+|+.++. ..
T Consensus 141 ~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 141 NNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGWAPT 208 (409)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTTCEE
T ss_pred CCCEEEEecC-----CCcEEEEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCceeE
Confidence 6789998752 357999999987765543321 1122 3332 446776644221 278999987543 23
Q ss_pred EccCCC--CCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEcc---CCCCCCcc-e-eEEEE--CCEEE
Q psy10286 585 IVKSMQ--KHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVK---PMLTKRCR-L-GVAAL--NNKIY 653 (748)
Q Consensus 585 ~~~~~~--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~-~-~~~~~--~~~i~ 653 (748)
.+...+ ....-+++++. ++.||+..+ ...+++||+.+.....+. ........ . +++.. ++.+|
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 331111 11222334443 689999432 247999999988765552 11111222 1 44444 58999
Q ss_pred EEeccCCCccccEEEEEeCCCCcEEEccCCCC----------CCc--ceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCC
Q psy10286 654 VCGGYDGAIFLQSVEMYDPITDEWKMIASMNV----------MRS--RVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPS 720 (748)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~----------~r~--~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~ 720 (748)
+.... .+.|++||+....-...+.... .+. -.+++.. +++|||.-.. ....|.++|+.
T Consensus 283 v~d~~-----~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~----~~~~I~~~~~~ 353 (409)
T 3hrp_A 283 MSDQN-----LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF----KGYCLRKLDIL 353 (409)
T ss_dssp EEETT-----TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT----TTCEEEEEETT
T ss_pred EEeCC-----CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC----CCCEEEEEECC
Confidence 98643 3579999987653222222100 111 1233333 5779988531 12479999976
Q ss_pred CCceEec
Q psy10286 721 TDSWAFV 727 (748)
Q Consensus 721 ~~~W~~~ 727 (748)
++....+
T Consensus 354 ~G~v~~~ 360 (409)
T 3hrp_A 354 DGYVSTV 360 (409)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 7665544
No 282
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.98 E-value=5.2 Score=45.28 Aligned_cols=187 Identities=14% Similarity=0.205 Sum_probs=95.8
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
++.+.+.||.+ ..+..||..+.+-...-.- ....-.+++.. ++..++.||.+ ..+..||.....-..+
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRRFVG-HTKDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYTI 509 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeEEeC-CCCCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCcceee
Confidence 66777778754 4688899888753321110 11111222222 56666777755 3577788755432222
Q ss_pred c-CCCCCCcceEEEEE--CC--EEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccC
Q psy10286 587 K-SMQKHRSAGGVIAF--DS--YVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYD 659 (748)
Q Consensus 587 ~-~~~~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 659 (748)
. .....+....++.+ ++ ..++.|+.++ .+..||..+.+-... +.........+.+ ++++++.||.+
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~D 582 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKD 582 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 2 11112222223333 22 4566666643 588899877654322 1111122222333 67788888865
Q ss_pred CCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 660 GAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
+ .|.+||..+.+-. ..+.....-.+++...+..++.+|.+ ..+.+||..++.-
T Consensus 583 g-----~i~iwd~~~~~~~--~~~~~~~~v~~~~~sp~~~~l~~~~~-----~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 583 G-----VVLLWDLAEGKKL--YSLEANSVIHALCFSPNRYWLCAATE-----HGIKIWDLESKSI 635 (694)
T ss_dssp S-----BCEEEETTTTEEE--ECCBCSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEE
T ss_pred C-----eEEEEECCCCceE--EEecCCCcEEEEEEcCCCcEEEEEcC-----CCEEEEECCCCCC
Confidence 3 5788898776532 22222222333444433334444422 3588999887654
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.98 E-value=10 Score=39.62 Aligned_cols=213 Identities=14% Similarity=0.073 Sum_probs=120.2
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCC-----eEEEcc-CCCCCcce
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRR-----VWNKVS-PMCFKRSA 548 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~-----~W~~~~-~~~~~r~~ 548 (748)
..+..+|+....+..+.+ ..+.-.++++. ++.||+.--. ...++++++... ....+. .+. .-
T Consensus 92 ~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~---~p 161 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQ---AP 161 (400)
T ss_dssp TEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEEC------CCCEEEECSSCS---CE
T ss_pred ceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecC-----CCeEEEEEcccCCCCCcceEEEeCCCC---Cc
Confidence 567888888877766532 22333455554 6899997532 256888888752 222222 121 22
Q ss_pred eEEEE--ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc--CCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEE
Q psy10286 549 VGAAA--LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK--SMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVER 622 (748)
Q Consensus 549 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 622 (748)
.+.++ .++.||+.-.. ...++++|+....-..+. .+..|+ ++++. ++.||+.-... ...+++
T Consensus 162 ~glavD~~~~~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~~----~~~I~~ 229 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT----PAKIKK 229 (400)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECSS----SCCEEE
T ss_pred ccEEEEecCCceEEEECC-----CCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCCC----CCEEEE
Confidence 34444 37899998542 357889998876654443 232232 34443 68999875211 246999
Q ss_pred EECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCC-CCCcceEEEEECCEE
Q psy10286 623 YDPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMN-VMRSRVALVANMGKL 699 (748)
Q Consensus 623 yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~l 699 (748)
+++....-+.+..-.. ..-.++++- +++||+.-.. .+.|+.+|.....-..+...+ .-..-.++++.++.|
T Consensus 230 ~~~dG~~~~~~~~~~l-~~P~glavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~l 303 (400)
T 3p5b_L 230 GGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKV 303 (400)
T ss_dssp EETTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEE
T ss_pred EeCCCCccEEEEECCC-CceEEEEEEeCCCEEEEEECC-----CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEE
Confidence 9987544333211111 112334443 6899998643 468999998764433332211 112235667789999
Q ss_pred EEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 700 WAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 700 ~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
|+.-- ....|+++|+.++
T Consensus 304 ywtd~-----~~~~V~~~~~~~G 321 (400)
T 3p5b_L 304 FWTDI-----INEAIFSANRLTG 321 (400)
T ss_dssp EEEES-----SSCSEEEEESSSC
T ss_pred EEecC-----CCCeEEEEEcCCC
Confidence 99852 1235777775443
No 284
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=92.97 E-value=1.2 Score=45.23 Aligned_cols=214 Identities=11% Similarity=0.116 Sum_probs=106.0
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-C---CEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCCCCcceeE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-K---NRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMCFKRSAVG 550 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~---~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~r~~~~ 550 (748)
..+..||..+++............-.+++.. + +.+++.|+.+ ..+..||..+.+ -..+..-..+ -.+
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~--v~~ 116 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG-----GNLHIWNLEAPEMPVYSVKGHKEI--INA 116 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT-----SCEEEECTTSCSSCSEEECCCSSC--EEE
T ss_pred cEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC-----CeEEEEeCCCCCccEEEEEecccc--eEE
Confidence 5688888888776544322222222222222 2 4777777754 357888887654 1111111111 111
Q ss_pred EEE-------ECCEEEEEeCCCCCCCCceEEEEeCCCCe--EEEccCCCC--CCcceEEEE-----ECCEEEEEccCCCC
Q psy10286 551 AAA-------LNDKLYVCGGYDGVSSLNTVECYEPDKDQ--WRIVKSMQK--HRSAGGVIA-----FDSYVYALGGHDGL 614 (748)
Q Consensus 551 ~~~-------~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~--~r~~~~~~~-----~~~~iyv~GG~~~~ 614 (748)
+.. -++..++.|+.+ ..+..||..+.. ......... .+.-.+++. -++..++.|+.+
T Consensus 117 ~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-- 189 (357)
T 3i2n_A 117 IDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-- 189 (357)
T ss_dssp EEEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT--
T ss_pred EeeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC--
Confidence 211 256667777754 367888887754 233322111 112222221 366777777764
Q ss_pred cccCeEEEEECCCCcEEEccCCCCCCcceeEEEE----CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCC-----C
Q psy10286 615 SIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL----NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMN-----V 685 (748)
Q Consensus 615 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-----~ 685 (748)
..+..||..+.+-...... ...-.+++.. ++..++.|+.+ ..+.+||..+.+ .+..++ .
T Consensus 190 ---~~i~i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~--~~~~~~~~~~~~ 257 (357)
T 3i2n_A 190 ---GDIKLFDLRNMALRWETNI--KNGVCSLEFDRKDISMNKLVATSLE-----GKFHVFDMRTQH--PTKGFASVSEKA 257 (357)
T ss_dssp ---SEEEEEETTTTEEEEEEEC--SSCEEEEEESCSSSSCCEEEEEEST-----TEEEEEEEEEEE--TTTEEEEEEEEC
T ss_pred ---CeEEEEECccCceeeecCC--CCceEEEEcCCCCCCCCEEEEECCC-----CeEEEEeCcCCC--cccceeeeccCC
Confidence 3689999988764333221 1222233332 46677777654 367778765421 111111 1
Q ss_pred CC-cceEEEEE-CCE-EEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 686 MR-SRVALVAN-MGK-LWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 686 ~r-~~~~~~~~-~~~-l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
.. .-.++... ++. +++.||.++ .+.+||..+
T Consensus 258 ~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~ 291 (357)
T 3i2n_A 258 HKSTVWQVRHLPQNRELFLTAGGAG-----GLHLWKYEY 291 (357)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTS-----EEEEEEEEC
T ss_pred CcCCEEEEEECCCCCcEEEEEeCCC-----cEEEeecCC
Confidence 11 12223333 455 777777543 577777654
No 285
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.91 E-value=4.9 Score=45.35 Aligned_cols=117 Identities=17% Similarity=0.223 Sum_probs=72.3
Q ss_pred EEEECCEEEEEeCCCCCCCCceEEEEeCCCCe--EEEccCCCCC--------CcceEEEEECCEEEEEccCCCCcccCeE
Q psy10286 551 AAALNDKLYVCGGYDGVSSLNTVECYEPDKDQ--WRIVKSMQKH--------RSAGGVIAFDSYVYALGGHDGLSIFDSV 620 (748)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 620 (748)
-++.++.||+.... ..++.+|..+.+ |+.-...+.. ....+.++.+++||+... ...+
T Consensus 62 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l 129 (668)
T 1kv9_A 62 PLFHDGVIYTSMSW------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DGRL 129 (668)
T ss_dssp CEEETTEEEEEEGG------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TSEE
T ss_pred CEEECCEEEEECCC------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CCEE
Confidence 34679999987652 468899987764 8876443211 112345667899988643 2469
Q ss_pred EEEECCCCc--EEEccCCCC--CCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc--EEE
Q psy10286 621 ERYDPKTDE--WTSVKPMLT--KRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE--WKM 679 (748)
Q Consensus 621 ~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~ 679 (748)
+.+|..+.+ |+.-..-+. .....+.++.++.+|+..+.........++.||.++.+ |+.
T Consensus 130 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 999988774 876532111 12223345668888774332111234589999998765 875
No 286
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=92.90 E-value=2 Score=47.61 Aligned_cols=221 Identities=10% Similarity=-0.043 Sum_probs=110.8
Q ss_pred ceEEEEeC--CCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE
Q psy10286 477 STVEVFDP--LVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 477 ~~~~~yd~--~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 554 (748)
..+|..+. .... ..+...+..+ ..+...-++.++++.+..+ ....||..+++-..+...+. ...+..-
T Consensus 90 ~~l~~~~~~~~g~~-~~l~~~~~~~-~~~~s~dg~~~~~~s~~~~-----~~~l~d~~~g~~~~l~~~~~---~~~~~sp 159 (582)
T 3o4h_A 90 HALFKVNTSRPGEE-QRLEAVKPMR-ILSGVDTGEAVVFTGATED-----RVALYALDGGGLRELARLPG---FGFVSDI 159 (582)
T ss_dssp EEEEEEETTSTTCC-EECTTSCSBE-EEEEEECSSCEEEEEECSS-----CEEEEEEETTEEEEEEEESS---CEEEEEE
T ss_pred eEEEEEeccCCCcc-ccccCCCCce-eeeeCCCCCeEEEEecCCC-----CceEEEccCCcEEEeecCCC---ceEEECC
Confidence 45666776 3332 2443333222 2222222445555544322 23477888887766654332 2223334
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEc
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSV 633 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 633 (748)
+|+..++++.++. ....++.+|+.+++++.+..-+.. ....+.. +|+.++.+..++ ...++.+|..+++...+
T Consensus 160 DG~~la~~~~~~~-~~~~i~~~d~~~g~~~~l~~~~~~--~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~~~ 233 (582)
T 3o4h_A 160 RGDLIAGLGFFGG-GRVSLFTSNLSSGGLRVFDSGEGS--FSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVEDL 233 (582)
T ss_dssp ETTEEEEEEEEET-TEEEEEEEETTTCCCEEECCSSCE--EEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEEEC
T ss_pred CCCEEEEEEEcCC-CCeEEEEEcCCCCCceEeecCCCc--cccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEEEc
Confidence 6666665554321 124699999999888766432211 1222222 555444443322 24799999999888733
Q ss_pred cCCCCCCccee-----E--EEECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCC
Q psy10286 634 KPMLTKRCRLG-----V--AALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYD 706 (748)
Q Consensus 634 ~~~p~~r~~~~-----~--~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~ 706 (748)
......-.... . ..-++++++.+..++ .+.+|+. .+... .+.. ...++...++++++.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g-----~~~l~~~--g~~~~---~~~~-~v~~~~~sdg~~l~~~s~~ 302 (582)
T 3o4h_A 234 ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG-----RSAVFID--GERVE---APQG-NHGRVVLWRGKLVTSHTSL 302 (582)
T ss_dssp CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT-----EEEEEET--TEEEC---CCSS-EEEEEEEETTEEEEEEEET
T ss_pred cCCCcChhhhhhccccceeEcCCCcEEEEEEcCC-----cEEEEEE--CCeec---cCCC-ceEEEEecCCEEEEEEcCC
Confidence 22111000000 0 223667777776543 5667776 44333 2221 1122222388888776643
Q ss_pred CCCCCCeEEEEeCCCCceEec
Q psy10286 707 GVSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 707 ~~~~~~~v~~yd~~~~~W~~~ 727 (748)
.. ...++.+|..+ +.+.+
T Consensus 303 ~~--p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 303 ST--PPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp TE--EEEEEEETTCC-EEECC
T ss_pred CC--CCeEEEEcCCC-ceEEE
Confidence 22 24678888765 44443
No 287
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=92.79 E-value=3 Score=43.09 Aligned_cols=219 Identities=13% Similarity=0.144 Sum_probs=105.7
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCC--cceeE----
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFK--RSAVG---- 550 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~--r~~~~---- 550 (748)
..+..+|..+.+-...-......-...+..-++...+.||.++ .+..||..+..-.. ..++.. ..+|.
T Consensus 88 ~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~-----~v~iw~~~~~~~~~-~~~~~~~~~~gh~~~v~ 161 (380)
T 3iz6_a 88 GRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDS-----ACSIFNLSSQADRD-GNMPVSRVLTGHKGYAS 161 (380)
T ss_dssp SEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSS-----CCEEEECCCCSSCC-CSSTTCCBCCCCSSCCC
T ss_pred CeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCC-----cEEEEECCCCcccc-CCccceeeccCCCcceE
Confidence 4677888877654322111111111111122667778888653 45566665432110 111111 11111
Q ss_pred -EEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc--CCCCCCcc--eEEEE--ECCEEEEEccCCCCcccCeEE
Q psy10286 551 -AAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK--SMQKHRSA--GGVIA--FDSYVYALGGHDGLSIFDSVE 621 (748)
Q Consensus 551 -~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~--~~~~~--~~~~iyv~GG~~~~~~~~~~~ 621 (748)
+... ++..++.|+.+ ..+..||..++.-...- ..+..... .++.. .++.+++.||.++ .+.
T Consensus 162 ~~~~~~~~~~~l~s~s~D-----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~ 231 (380)
T 3iz6_a 162 SCQYVPDQETRLITGSGD-----QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-----TVR 231 (380)
T ss_dssp CCBCCSSSSSCEEEECTT-----SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-----CEE
T ss_pred EEEEecCCCCEEEEECCC-----CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-----eEE
Confidence 1111 23445566644 46788898887643322 22222111 12222 2677888888754 578
Q ss_pred EEECCCC--cEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEc-cCCCCC----Cc-ceE
Q psy10286 622 RYDPKTD--EWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMI-ASMNVM----RS-RVA 691 (748)
Q Consensus 622 ~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~----r~-~~~ 691 (748)
.||.... .-..+.. .......+.+ ++..++.|+.++ .+.+||..+..-... ...+.. .. -.+
T Consensus 232 ~wd~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 232 LWDLRITSRAVRTYHG---HEGDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTGHQLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp EEETTTTCCCCEEECC---CSSCCCEEEECTTSSEEEEECSSS-----CEEEEETTTTEEEEEECCCCSSSCCSSCSCSE
T ss_pred EEECCCCCcceEEECC---cCCCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCCcEEEEecccccccccccCceEE
Confidence 8887632 1111111 1111122222 567788887653 688899887654332 111110 11 122
Q ss_pred EE-EECCEEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 692 LV-ANMGKLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 692 ~~-~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
++ ..++++++.|+.++ .+.+||..+.+-
T Consensus 304 ~~~s~~g~~l~~g~~dg-----~i~vwd~~~~~~ 332 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNG-----DCYVWDTLLAEM 332 (380)
T ss_dssp EEECSSSSEEEEECTTS-----CEEEEETTTCCE
T ss_pred EEECCCCCEEEEEECCC-----CEEEEECCCCce
Confidence 22 23677888877543 589999877654
No 288
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=92.71 E-value=1.3 Score=44.50 Aligned_cols=198 Identities=13% Similarity=0.174 Sum_probs=95.0
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCC-eEEEccCCCCCcceeEEEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRR-VWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~-~W~~~~~~~~~r~~~~~~~~ 554 (748)
..+.+|| .+++-.....++.. ...+.+.. ++.||+... . +++||+... .|.... +... ....+..
T Consensus 40 ~~l~~~d-~~g~~~~~~~~~~~-~~~~~~~~~~g~l~v~t~-------~-l~~~d~~g~~~~~~~~--~~~~-~~~~~~~ 106 (330)
T 3hxj_A 40 KNLYAIN-TDGSVKWFFKSGEI-IECRPSIGKDGTIYFGSD-------K-VYAINPDGTEKWRFDT--KKAI-VSDFTIF 106 (330)
T ss_dssp TTTEEEC-TTSCEEESSCGGGE-EEECCEETTTTEECCSSC-------E-EEEECCCGGGGGGSCC--------CCEEEE
T ss_pred CEEEEEC-CCCcEEEEEecCCC-cccceEEecCCcEEEecC-------c-EEEECCCCcEEEEEEC--CCCc-ccCceEE
Confidence 4578899 66653222222211 11222332 677776221 2 889997432 243221 1111 1122334
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCC-CCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCC-cEE
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPD-KDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTD-EWT 631 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~ 631 (748)
++.+|+... + ..+++||+. ...|+...+.+ . ..+.+.. ++.+|+... ...+++||+... .|.
T Consensus 107 ~~~l~v~t~-~-----~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~vgt~------~~~l~~~d~~g~~~~~ 171 (330)
T 3hxj_A 107 EDILYVTSM-D-----GHLYAINTDGTEKWRFKTKKA--I-YATPIVSEDGTIYVGSN------DNYLYAINPDGTEKWR 171 (330)
T ss_dssp TTEEEEECT-T-----SEEEEECTTSCEEEEEECSSC--C-CSCCEECTTSCEEEECT------TSEEEEECTTSCEEEE
T ss_pred CCEEEEEec-C-----CEEEEEcCCCCEEEEEcCCCc--e-eeeeEEcCCCEEEEEcC------CCEEEEECCCCCEeEE
Confidence 888887432 1 468899988 34576653322 1 2222333 677777432 146999999822 365
Q ss_pred EccCCCCCCcceeEEE-ECCEEEEEeccCCCccccEEEEEeCCC-CcEEEccCCCCCCcceEEEEE-CCEEEEEeCCCCC
Q psy10286 632 SVKPMLTKRCRLGVAA-LNNKIYVCGGYDGAIFLQSVEMYDPIT-DEWKMIASMNVMRSRVALVAN-MGKLWAIGGYDGV 708 (748)
Q Consensus 632 ~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~ 708 (748)
.-.. ... ..+.+. -++.||+.. ..+++||... ..|..-... .. ..+.+.. ++.||+...
T Consensus 172 ~~~~--~~~-~~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~--~~-~~~~~~~~~g~l~v~t~---- 233 (330)
T 3hxj_A 172 FKTN--DAI-TSAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGY--WT-VTRPAISEDGTIYVTSL---- 233 (330)
T ss_dssp EECS--SCC-CSCCEECTTCCEEEES--------SSEEEECTTSCEEEEECCSS--CC-CSCCEECTTSCEEEEET----
T ss_pred EecC--CCc-eeeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCC--cc-eeceEECCCCeEEEEcC----
Confidence 4322 111 122333 366777654 3578888442 346654221 11 1222223 456766531
Q ss_pred CCCCeEEEEeCCCC
Q psy10286 709 SNLPTVEVYDPSTD 722 (748)
Q Consensus 709 ~~~~~v~~yd~~~~ 722 (748)
...+++||+...
T Consensus 234 --~~gl~~~~~~g~ 245 (330)
T 3hxj_A 234 --DGHLYAINPDGT 245 (330)
T ss_dssp --TTEEEEECTTSC
T ss_pred --CCeEEEECCCCC
Confidence 124666665443
No 289
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.71 E-value=5.5 Score=40.17 Aligned_cols=184 Identities=9% Similarity=0.052 Sum_probs=92.9
Q ss_pred CEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCC-CCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 509 NRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC-FKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 509 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
+..++.|+.+ ..+..||..+........+. ....-.+++.. ++..++.|+.+ ..+..||..+......
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCceee
Confidence 4777778754 35778887763222211111 11111222222 66667777754 4788999988876554
Q ss_pred cCCCCCCcceEEEE---ECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCcc
Q psy10286 587 KSMQKHRSAGGVIA---FDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIF 663 (748)
Q Consensus 587 ~~~~~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~ 663 (748)
.... ..-.++.. -++.+++.|+.++ .+..||..+.+-.. .+.......+.....+.+++.++
T Consensus 124 ~~~~--~~v~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------ 188 (368)
T 3mmy_A 124 AQHD--APVKTIHWIKAPNYSCVMTGSWDK-----TLKFWDTRSSNPMM--VLQLPERCYCADVIYPMAVVATA------ 188 (368)
T ss_dssp EECS--SCEEEEEEEECSSCEEEEEEETTS-----EEEEECSSCSSCSE--EEECSSCEEEEEEETTEEEEEEG------
T ss_pred cccc--CceEEEEEEeCCCCCEEEEccCCC-----cEEEEECCCCcEEE--EEecCCCceEEEecCCeeEEEeC------
Confidence 3211 11122332 2667788887643 68889987664211 11222233334444565555443
Q ss_pred ccEEEEEeCCCCc--EEEccCCCCCCcceEEEEEC----CEEEEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 664 LQSVEMYDPITDE--WKMIASMNVMRSRVALVANM----GKLWAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 664 ~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~----~~l~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
...+..||..... +..+...............+ ...++.|+.+ ..+.+||..+.
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----g~i~i~~~~~~ 248 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE-----GRVAIHYINPP 248 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT-----SEEEEEESSCS
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCC-----CcEEEEecCCC
Confidence 2457778776543 44433222222222222222 2236666643 35777777664
No 290
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=92.62 E-value=6.3 Score=37.14 Aligned_cols=144 Identities=13% Similarity=0.152 Sum_probs=81.1
Q ss_pred EEEEECCEEEEEccCCCCCCCCeEEEEECCCCe-EE--Ec----cCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceE
Q psy10286 503 GVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRV-WN--KV----SPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTV 573 (748)
Q Consensus 503 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~-W~--~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 573 (748)
|++..++.+|+|=| +.+|+++..... .. .+ +.+|.. -. ++... ++++|+|-| +..
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~~-ID-AA~~~~~~~k~yfFkG-------~~y 98 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEK-ID-AVYEAPQEEKAVFFAG-------NEY 98 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCSC-CS-EEEEETTTTEEEEEET-------TEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCCC-cc-EEEEECCCCEEEEEeC-------CEE
Confidence 44556899999977 467777655422 11 22 233422 22 22222 689999988 678
Q ss_pred EEEeCCCCe--E-EEccC--CCCCC-cceEEEE--ECCEEEEEccCCCCcccCeEEEEECCCCcEEE-----cc-C-CCC
Q psy10286 574 ECYEPDKDQ--W-RIVKS--MQKHR-SAGGVIA--FDSYVYALGGHDGLSIFDSVERYDPKTDEWTS-----VK-P-MLT 638 (748)
Q Consensus 574 ~~yd~~~~~--W-~~~~~--~~~~r-~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~~-~-~p~ 638 (748)
|+||..+-. + +.+.. +|... .--++.. .++++|+|-|. ..|+||..+++-.. +. . +..
T Consensus 99 W~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~-------~ywr~d~~~~~v~~gyPr~i~~~w~g~ 171 (218)
T 1gen_A 99 WIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD-------KFWRYNEVKKKMDPGFPKLIADAWNAI 171 (218)
T ss_dssp EEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT-------EEEEEETTTTEECSSCCEEHHHHSSSC
T ss_pred EEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC-------EEEEEECccccccCCCCcchhhccCCC
Confidence 999852100 0 11212 22111 1223333 36899999884 79999988764321 11 0 112
Q ss_pred CCcceeEEEEC--CEEEEEeccCCCccccEEEEEeCCCCc
Q psy10286 639 KRCRLGVAALN--NKIYVCGGYDGAIFLQSVEMYDPITDE 676 (748)
Q Consensus 639 ~r~~~~~~~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~~ 676 (748)
+..-.++...+ +.+|++-| +..|.||..+..
T Consensus 172 p~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 172 PDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp CSSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CCCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 22333444444 89999987 578899876654
No 291
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=92.27 E-value=13 Score=39.29 Aligned_cols=236 Identities=9% Similarity=-0.007 Sum_probs=113.6
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCC--CCceeec-cc----ccccceEEecccccccCCCccceEEEEeCCCCceEE--
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPL--VGRWQMA-EE----ETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQM-- 491 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~--~~~W~~~-~~----~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~-- 491 (748)
+..+++.|+.+ ..+..||.. ++..... .. ..+....+..++.....|.....++.++..+.....
T Consensus 114 ~~~l~~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 114 ESRLIACADSD------KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp SSEEEEEEGGG------TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred CCEEEEEECCC------CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccc
Confidence 33456777653 246777766 4433222 11 111122223333322223333457888876654321
Q ss_pred ccCCCcccc-eeEEEEE-C---CEEEEEccCCCCCCCCeEEEEECCCCeEEEc-cCCCCCcceeEEEEECCEEEEEeCCC
Q psy10286 492 AEAMSMLRS-RVGVAVM-K---NRLYAFGGYNGSERLSTVEEFDPVRRVWNKV-SPMCFKRSAVGAAALNDKLYVCGGYD 565 (748)
Q Consensus 492 ~~~~~~~r~-~~~~~~~-~---~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~-~~~~~~r~~~~~~~~~~~iyv~GG~~ 565 (748)
...+..... -.+++.. + +..++.|+.+ ..+..||..+.+.... ..-....-...+.. +++.++.||.+
T Consensus 188 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD 261 (450)
T ss_dssp CCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS
T ss_pred ceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC
Confidence 111111111 1222222 6 7788888754 3678888776643221 11111111112222 77777777754
Q ss_pred CCCCCceEEEEeCCCCeEEEccCC------------------------CCCCcceEEEEE-CC-EEEEEccCCCCcccCe
Q psy10286 566 GVSSLNTVECYEPDKDQWRIVKSM------------------------QKHRSAGGVIAF-DS-YVYALGGHDGLSIFDS 619 (748)
Q Consensus 566 ~~~~~~~~~~yd~~~~~W~~~~~~------------------------~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~ 619 (748)
..+..||..+.+....-.. .....-..++.. ++ .+++.++.+ ..
T Consensus 262 -----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d-----~~ 331 (450)
T 2vdu_B 262 -----DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT-----KC 331 (450)
T ss_dssp -----SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC-----SE
T ss_pred -----CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC-----Ce
Confidence 4788899888764322111 000111122222 34 444444232 46
Q ss_pred EEEEEC--C-CCcEEEccCCCCCCcceeEEEECCEEEEEeccCCC----ccccEEEEEeCCCCcEE
Q psy10286 620 VERYDP--K-TDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGA----IFLQSVEMYDPITDEWK 678 (748)
Q Consensus 620 ~~~yd~--~-~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~----~~~~~v~~yd~~~~~W~ 678 (748)
+..||. . ...+..+..+.....-.+++...+.+++..+.... ...-.++.++..++.|.
T Consensus 332 i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 332 IIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp EEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred EEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 778877 3 34556555444333334455556777777654321 12237778888888885
No 292
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.25 E-value=3.9 Score=45.38 Aligned_cols=120 Identities=14% Similarity=0.200 Sum_probs=70.8
Q ss_pred EEEEECCEEEEEeCCCCCCCCceEEEEeC-CCCe--EEEccCCCCC-----C---cceEEEE--ECCE----EEEEccCC
Q psy10286 550 GAAALNDKLYVCGGYDGVSSLNTVECYEP-DKDQ--WRIVKSMQKH-----R---SAGGVIA--FDSY----VYALGGHD 612 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~-~~~~--W~~~~~~~~~-----r---~~~~~~~--~~~~----iyv~GG~~ 612 (748)
+-++.++.||+.+.. ...++.+|. .+.+ |+.-...+.. + ...+.++ .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-- 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-- 129 (599)
T ss_dssp CCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT--
T ss_pred ccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC--
Confidence 345569999998652 246899998 6664 9886543321 1 1223455 5777 887543
Q ss_pred CCcccCeEEEEECCCCc--EEEccCCCCC--CcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc--EEEc
Q psy10286 613 GLSIFDSVERYDPKTDE--WTSVKPMLTK--RCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE--WKMI 680 (748)
Q Consensus 613 ~~~~~~~~~~yd~~~~~--W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~ 680 (748)
-..++.+|..+.+ |+.-..-+.. ....+-++.++++|+-++.........++.||.++.+ |+.-
T Consensus 130 ----dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 ----DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp ----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred ----CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 2469999988775 8754221111 1122335568887764421111123589999998765 8754
No 293
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=92.22 E-value=5 Score=42.13 Aligned_cols=149 Identities=12% Similarity=0.116 Sum_probs=80.2
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEE
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTS 632 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 632 (748)
++.+++.|+.+ ..+..||..+.+-...-..+.....-.++.+ ++..++.|+.++ .+..||..+.+...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG-----IIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEcCCccEEE
Confidence 47777888754 4788999887654322111111112222223 677777887753 58899998866533
Q ss_pred ccCCCCCCcceeEEEE-----CCEEEEEeccCCCccccEEEEEeCCCCcEEEc-c-C---------CCC-----------
Q psy10286 633 VKPMLTKRCRLGVAAL-----NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMI-A-S---------MNV----------- 685 (748)
Q Consensus 633 ~~~~p~~r~~~~~~~~-----~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~---------~p~----------- 685 (748)
.-..+....-.+++.. ++.+++.|+.+ ..+.+||..+.+-... . . .|.
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 2111111111111111 34566666643 3688899877653221 1 0 000
Q ss_pred ---CCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 686 ---MRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 686 ---~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
...-.+++..++++++.||.++ .|.+||..+.+
T Consensus 326 ~~~~~~v~~l~~~~~~~l~s~~~d~-----~i~~wd~~~~~ 361 (437)
T 3gre_A 326 IRSLNALSTISVSNDKILLTDEATS-----SIVMFSLNELS 361 (437)
T ss_dssp CCSGGGGCCEEEETTEEEEEEGGGT-----EEEEEETTCGG
T ss_pred cccCCceEEEEECCceEEEecCCCC-----eEEEEECCCcc
Confidence 0111233444888888888653 68888887754
No 294
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=92.12 E-value=2 Score=45.59 Aligned_cols=147 Identities=11% Similarity=0.079 Sum_probs=84.1
Q ss_pred EEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEE--c----cCCCCCcceeEEEE--ECCEEEEEeCCCCCCCCceEE
Q psy10286 503 GVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNK--V----SPMCFKRSAVGAAA--LNDKLYVCGGYDGVSSLNTVE 574 (748)
Q Consensus 503 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~--~----~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 574 (748)
+++..+|.+|+|-| ..+|+++.....+.. + +.+|... . ++.. .++++|+|-| +.+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~i-D-Aa~~~~~~g~~~fFKg-------~~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNGL-E-AAYEFADRDEVRFFKG-------NKYW 330 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSSC-C-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCCe-e-EEEEEcCCCeEEEEeC-------CEEE
Confidence 55667999999987 457777765544322 2 2344322 1 2222 2789999988 5678
Q ss_pred EEeCCCC--eE-EEcc---CCCCCCcce-EEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEE-----Ecc-CCC-C
Q psy10286 575 CYEPDKD--QW-RIVK---SMQKHRSAG-GVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWT-----SVK-PML-T 638 (748)
Q Consensus 575 ~yd~~~~--~W-~~~~---~~~~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-----~~~-~~p-~ 638 (748)
+|+..+- .+ ..+. .+|..-..- ++... ++++|+|-|. ..|+||..+.+-. .+. ..| .
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~-------~yw~yd~~~~~~~~gYPk~I~~~fpgi 403 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVAN-------KYWRYDEYKRSMDPGYPKMIAHDFPGI 403 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETT-------EEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCC-------EEEEEeCCCccccCCCCcchhhcCCCC
Confidence 8874320 00 1111 122211112 23333 6899999884 7999998754322 111 111 1
Q ss_pred CCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEEE
Q psy10286 639 KRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKM 679 (748)
Q Consensus 639 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 679 (748)
+..--++...++++|++-| +..|+||..+.+-..
T Consensus 404 p~~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 404 GHKVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRILT 437 (450)
T ss_dssp CSCCSEEEEETTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCCccEEEEcCCeEEEEeC-------CEEEEEECCcceEec
Confidence 2222344456899999987 688999988776543
No 295
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.09 E-value=1.1 Score=46.45 Aligned_cols=147 Identities=13% Similarity=0.186 Sum_probs=76.6
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEE
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTS 632 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 632 (748)
++.+++.||.+ ..+..||..+..-...-..+.+......... ++.+++.|+.++ .+..||..+.+-..
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP-----KVQLCDLKSGSCSH 180 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS-----SEEEEESSSSCCCE
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC-----eEEEEeCCCcceee
Confidence 45577777754 4688899888775444333222211111111 345777777643 58889987654221
Q ss_pred ccCCCCCCcceeEEEE--CC-EEEEEeccCCCccccEEEEEeCCCCc--EEEccC------------CCCCCcceEEEEE
Q psy10286 633 VKPMLTKRCRLGVAAL--NN-KIYVCGGYDGAIFLQSVEMYDPITDE--WKMIAS------------MNVMRSRVALVAN 695 (748)
Q Consensus 633 ~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~------------~p~~r~~~~~~~~ 695 (748)
. +...........+ ++ .+++.|+.++ .+.+||..+.. ...+.. ..........+..
T Consensus 181 ~--~~~~~~~v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 181 I--LQGHRQEILAVSWSPRYDYILATASADS-----RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp E--ECCCCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred e--ecCCCCcEEEEEECCCCCcEEEEEcCCC-----cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 1 1111222222333 33 3788887653 57888886543 122110 0111122222333
Q ss_pred --CCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 696 --MGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 696 --~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
+++.++.||.++ .+.+||..++.
T Consensus 254 ~~~~~~l~~~~~dg-----~i~vwd~~~~~ 278 (408)
T 4a11_B 254 TSDGLHLLTVGTDN-----RMRLWNSSNGE 278 (408)
T ss_dssp CTTSSEEEEEETTS-----CEEEEETTTCC
T ss_pred cCCCCEEEEecCCC-----eEEEEECCCCc
Confidence 567777777543 58999988764
No 296
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=92.08 E-value=9.1 Score=37.00 Aligned_cols=189 Identities=13% Similarity=0.026 Sum_probs=103.6
Q ss_pred cccccCCCccceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC
Q psy10286 467 SCLTKAGDSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF 544 (748)
Q Consensus 467 ~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~ 544 (748)
+.++........+++||+....-..+..... ..-+++++. ++.||+.-.. .+.++++|+....-..+.+...
T Consensus 48 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~ 121 (267)
T 1npe_A 48 KVVYWTDISEPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRVLFDTGL 121 (267)
T ss_dssp TEEEEEETTTTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSC
T ss_pred CEEEEEECCCCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECC-----CCEEEEEEcCCCCEEEEEECCC
Confidence 3344433344678889887664333221111 122445554 5799997642 3578999987543333222111
Q ss_pred CcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeE
Q psy10286 545 KRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSV 620 (748)
Q Consensus 545 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 620 (748)
. .-.++++. ++++|+..... ....++++++....-+.+..... ..-.+++.- ++.||+.-.. .+.+
T Consensus 122 ~-~P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~-----~~~I 191 (267)
T 1npe_A 122 V-NPRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAG-----THRA 191 (267)
T ss_dssp S-SEEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETT-----TTEE
T ss_pred C-CccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECC-----CCEE
Confidence 1 12344443 68999985321 13578888876544333322111 122333443 5789988654 3579
Q ss_pred EEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEE
Q psy10286 621 ERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWK 678 (748)
Q Consensus 621 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 678 (748)
+++|+....-..+.. ....-.+++.-++.+|+.... .+.|.++|+.+.+-.
T Consensus 192 ~~~~~~g~~~~~~~~--~~~~P~gi~~d~~~lyva~~~-----~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 192 ECLNPAQPGRRKVLE--GLQYPFAVTSYGKNLYYTDWK-----TNSVIAMDLAISKEM 242 (267)
T ss_dssp EEEETTEEEEEEEEE--CCCSEEEEEEETTEEEEEETT-----TTEEEEEETTTTEEE
T ss_pred EEEecCCCceEEEec--CCCCceEEEEeCCEEEEEECC-----CCeEEEEeCCCCCce
Confidence 999997643222211 111224566668899997632 257999999877644
No 297
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=92.06 E-value=7.1 Score=44.22 Aligned_cols=208 Identities=13% Similarity=0.060 Sum_probs=107.6
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCC--------CCCceEEEEeCC
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGV--------SSLNTVECYEPD 579 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~--------~~~~~~~~yd~~ 579 (748)
+|+..+++-..++.....++++|..+++..... .+..+....+-. |++-++++..+.. .....++.++..
T Consensus 139 Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lg 216 (693)
T 3iuj_A 139 DGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLG 216 (693)
T ss_dssp TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETT
T ss_pred CCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECC
Confidence 565555543222223357999999999875431 111112222333 6643333332211 334568888877
Q ss_pred CCeE--EEccCCCC--CCcceEEEE-ECCE-EEEEccCCCCcccCeEEEEECCCC--cEEEccCCCCCCcceeEEEECCE
Q psy10286 580 KDQW--RIVKSMQK--HRSAGGVIA-FDSY-VYALGGHDGLSIFDSVERYDPKTD--EWTSVKPMLTKRCRLGVAALNNK 651 (748)
Q Consensus 580 ~~~W--~~~~~~~~--~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~ 651 (748)
+..= ..+-..+. +....+... -+++ |++...... ..+.++.+|..+. .|..+..-.... .......+++
T Consensus 217 t~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~g~~ 293 (693)
T 3iuj_A 217 TAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST--SGNRLYVKDLSQENAPLLTVQGDLDAD-VSLVDNKGST 293 (693)
T ss_dssp SCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS--SCCEEEEEETTSTTCCCEEEECSSSSC-EEEEEEETTE
T ss_pred CCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC--CCcEEEEEECCCCCCceEEEeCCCCce-EEEEeccCCE
Confidence 6542 11211121 222222222 2454 444333221 1368999998765 677764322111 1223345889
Q ss_pred EEEEeccCCCccccEEEEEeCCCC---cEEEccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceEec
Q psy10286 652 IYVCGGYDGAIFLQSVEMYDPITD---EWKMIASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 652 i~v~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (748)
+|+....++ ....++.+|..+. .|+.+.+-.... . +....++.|++..-.++ ...++++|+.++..+.+
T Consensus 294 l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~-~~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 294 LYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQV-L-TVHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREV 365 (693)
T ss_dssp EEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSC-E-EEEEETTEEEEEEEETT---EEEEEEECTTSCEEEEE
T ss_pred EEEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCCE-E-EEEEECCEEEEEEEECC---eeEEEEEECCCCeeEEe
Confidence 999876543 2468999998763 488763322222 2 55556777766543332 24688888876655554
No 298
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=92.01 E-value=0.081 Score=46.49 Aligned_cols=39 Identities=10% Similarity=0.267 Sum_probs=32.6
Q ss_pred EEecccHHHHHHHhhhcCcHHHHHHHHHHHhhcCCCCCc
Q psy10286 236 TIHSQNVQSLMVVASFLQMQKVADACADFLKKRFHPNNV 274 (748)
Q Consensus 236 ~~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l~~~n~ 274 (748)
.+..+++.+|+.+|+++++..|.+.|++++...+.-.+.
T Consensus 88 ~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ 126 (141)
T 1fs1_B 88 KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTP 126 (141)
T ss_dssp CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCH
T ss_pred hCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCH
Confidence 456788999999999999999999999999876655543
No 299
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=91.74 E-value=15 Score=43.94 Aligned_cols=145 Identities=10% Similarity=-0.049 Sum_probs=79.8
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEE-EEECCCCeEEEccCCCCCcceeEEEEE-
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVE-EFDPVRRVWNKVSPMCFKRSAVGAAAL- 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~-~yd~~t~~W~~~~~~~~~r~~~~~~~~- 554 (748)
..++.++..++....+...+..+....... +++.+++++. ...+| .||..+.+...+. .........+..
T Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d~~~~~~~~l~--~~~~~~~~~~~Sp 388 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIYDYRTGKAEKFE--ENLGNVFAMGVDR 388 (1045)
T ss_dssp TEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-----TEEEEEEEETTTCCEEECC--CCCCSEEEEEECT
T ss_pred CEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-----CCceEEEEECCCCCceEec--CCccceeeeEECC
Confidence 467888887777665543332121122222 5554455442 24788 9999888766655 221222233332
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCC-----CcccCeEEEEECCCCc
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDG-----LSIFDSVERYDPKTDE 629 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~~~~yd~~~~~ 629 (748)
+|+..++++.+ ..++.||..+++-..+..-........+..-+|+..++++.++ ......++.+|..+.+
T Consensus 389 DG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 389 NGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 67666666533 4899999998876655422211112222223666555555422 1123579999999887
Q ss_pred EEEcc
Q psy10286 630 WTSVK 634 (748)
Q Consensus 630 W~~~~ 634 (748)
...+.
T Consensus 464 ~~~l~ 468 (1045)
T 1k32_A 464 IFAAT 468 (1045)
T ss_dssp EEECS
T ss_pred EEEee
Confidence 65554
No 300
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.69 E-value=0.95 Score=48.00 Aligned_cols=190 Identities=10% Similarity=0.111 Sum_probs=89.7
Q ss_pred EEEEccCCCCCCCCeEEEEECCCC---eEEE--ccCC-CCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCe
Q psy10286 511 LYAFGGYNGSERLSTVEEFDPVRR---VWNK--VSPM-CFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQ 582 (748)
Q Consensus 511 iyv~GG~~~~~~~~~v~~yd~~t~---~W~~--~~~~-~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 582 (748)
+++.|+.+ ..+..||..+. .+.. ...+ .....-++++.. ++.+++.|+.+ ..+..||..+..
T Consensus 196 ~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~ 265 (430)
T 2xyi_A 196 YLLSASDD-----HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNN 265 (430)
T ss_dssp EEEEECTT-----SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSC
T ss_pred eEEEEeCC-----CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCC
Confidence 66667644 35778887762 1211 1111 111222333333 56677777644 468889987652
Q ss_pred -EEEccCCCCCCcceEEEEE---CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE---CCEEEEE
Q psy10286 583 -WRIVKSMQKHRSAGGVIAF---DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL---NNKIYVC 655 (748)
Q Consensus 583 -W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~ 655 (748)
...+..+........++.+ +..+++.|+.++ .+..||..+.. ..+..+.........+.+ +..+++.
T Consensus 266 ~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg-----~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~~l~s 339 (430)
T 2xyi_A 266 TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK-----TVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNETILAS 339 (430)
T ss_dssp SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTCTT-SCSEEEECCSSCEEEEEECSSCTTEEEE
T ss_pred CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC-----eEEEEeCCCCC-CCeEEeecCCCCEEEEEECCCCCCEEEE
Confidence 1111111111111222222 335888888743 68889987632 011111111122222333 3357888
Q ss_pred eccCCCccccEEEEEeCCCCcE------------EEccCCCCCCcceEEEEE--CCE-EEEEeCCCCCCCCCeEEEEeCC
Q psy10286 656 GGYDGAIFLQSVEMYDPITDEW------------KMIASMNVMRSRVALVAN--MGK-LWAIGGYDGVSNLPTVEVYDPS 720 (748)
Q Consensus 656 GG~~~~~~~~~v~~yd~~~~~W------------~~~~~~p~~r~~~~~~~~--~~~-l~v~GG~~~~~~~~~v~~yd~~ 720 (748)
||.++ .+.+||.....= ..+............+.. ++. +++.|+.+ ..+.+|++.
T Consensus 340 ~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~d-----g~i~iw~~~ 409 (430)
T 2xyi_A 340 SGTDR-----RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSED-----NIMQVWQMA 409 (430)
T ss_dssp EETTS-----CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETT-----SEEEEEEEC
T ss_pred EeCCC-----cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECC-----CCEEEeEcc
Confidence 87653 567777655110 000011111111222222 444 77777643 468888887
Q ss_pred CCceEe
Q psy10286 721 TDSWAF 726 (748)
Q Consensus 721 ~~~W~~ 726 (748)
++.+..
T Consensus 410 ~~~~~~ 415 (430)
T 2xyi_A 410 ENVYND 415 (430)
T ss_dssp HHHHCC
T ss_pred cccccC
Confidence 776653
No 301
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=91.44 E-value=12 Score=37.06 Aligned_cols=189 Identities=16% Similarity=0.225 Sum_probs=94.3
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCC--CeEEEccCCCCCcce-eEEEEE---CCEEEEEeCCCCCCCCceEEEEeCCCC
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVR--RVWNKVSPMCFKRSA-VGAAAL---NDKLYVCGGYDGVSSLNTVECYEPDKD 581 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t--~~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~ 581 (748)
++..++.|+.+ ..+..||..+ ..|.....+...... .+++.. ++.+++.||.+ ..+..||..+.
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-----g~v~vwd~~~~ 91 (351)
T 3f3f_A 22 YGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-----KTVKLWEEDPD 91 (351)
T ss_dssp SSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEECTT
T ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-----CeEEEEecCCC
Confidence 45566666643 3566666654 344444332222222 223332 36777888765 35677777654
Q ss_pred -------eEEEccCCCCCCcceEEEEE--C--CEEEEEccCCCCcccCeEEEEECCCCc----EEEcc-----CC-CCC-
Q psy10286 582 -------QWRIVKSMQKHRSAGGVIAF--D--SYVYALGGHDGLSIFDSVERYDPKTDE----WTSVK-----PM-LTK- 639 (748)
Q Consensus 582 -------~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~----W~~~~-----~~-p~~- 639 (748)
.|..+..+.........+.+ + +..++.|+.++ .+..||..+.+ |.... .. +..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 92 QEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG-----ILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp SCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC-----EEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred cccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC-----cEEEecCCChHHhccccccccccccccccCCc
Confidence 34444333322222222222 3 66777777643 68888877653 22110 11 111
Q ss_pred CcceeEEEE-----CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CC----EEEEEeCCCCC
Q psy10286 640 RCRLGVAAL-----NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MG----KLWAIGGYDGV 708 (748)
Q Consensus 640 r~~~~~~~~-----~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~----~l~v~GG~~~~ 708 (748)
.....+..+ ++..+++|+.++ .+..++.....+..+..+.........+.. ++ ++++.||.++
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg- 240 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQ-----AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG- 240 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTE-----EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS-
T ss_pred ccceeEEEeccCCCCCcEEEEecCCC-----cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC-
Confidence 111122222 266777777542 445566666666555444433333333333 33 7888887553
Q ss_pred CCCCeEEEEeCCC
Q psy10286 709 SNLPTVEVYDPST 721 (748)
Q Consensus 709 ~~~~~v~~yd~~~ 721 (748)
.+.+||..+
T Consensus 241 ----~i~iwd~~~ 249 (351)
T 3f3f_A 241 ----RIRIFKITE 249 (351)
T ss_dssp ----CEEEEEEEE
T ss_pred ----eEEEEeCCC
Confidence 477777655
No 302
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=91.40 E-value=5.5 Score=36.83 Aligned_cols=144 Identities=10% Similarity=0.092 Sum_probs=80.3
Q ss_pred EEEECCEEEEEccCCCCCCCCeEEEEECCCCe---EEEc----cCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEE
Q psy10286 504 VAVMKNRLYAFGGYNGSERLSTVEEFDPVRRV---WNKV----SPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECY 576 (748)
Q Consensus 504 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~---W~~~----~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y 576 (748)
++..++.+|+|-| +.+|+++..... =..+ +.+|.. -..+....++++|+|-| +..|+|
T Consensus 11 ~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~~-iDAa~~~~~g~~yfFkg-------~~yw~~ 75 (196)
T 3c7x_A 11 VAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPAS-INTAYERKDGKFVFFKG-------DKHWVF 75 (196)
T ss_dssp EEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCSS-CCEEEECTTSCEEEEET-------TEEEEE
T ss_pred EEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCCC-ccEEEEeCCCcEEEecC-------CEEEEE
Confidence 4466899999987 468888643210 0112 234542 22221124789999988 578888
Q ss_pred eCCCCeE---EEccC----CCCCCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEEE-----ccCC-CCCCcc
Q psy10286 577 EPDKDQW---RIVKS----MQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWTS-----VKPM-LTKRCR 642 (748)
Q Consensus 577 d~~~~~W---~~~~~----~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~~~~-p~~r~~ 642 (748)
+..+... ..+.. +|.....++... .++++|+|-|. ..|+||..+++-.. +... ..+..-
T Consensus 76 ~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG~-------~yw~yd~~~~~v~~gyPk~i~~~~gip~~i 148 (196)
T 3c7x_A 76 DEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN-------KYYRFNEELRAVDSEYPKNIKVWEGIPESP 148 (196)
T ss_dssp ETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEETT-------EEEEEETTTTEECTTCSEEGGGSBTCCSSC
T ss_pred eCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEECC-------EEEEEeCCcccccCCCCccHHHCCCcCCCc
Confidence 8542110 12222 332222222222 26899999884 78999987764321 1111 112222
Q ss_pred eeEEEE-CC-EEEEEeccCCCccccEEEEEeCCCCc
Q psy10286 643 LGVAAL-NN-KIYVCGGYDGAIFLQSVEMYDPITDE 676 (748)
Q Consensus 643 ~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 676 (748)
.++... ++ ++|++-| +..|.||..+.+
T Consensus 149 daAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 149 RGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp SEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred ceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 333344 44 8999987 688999988764
No 303
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=91.26 E-value=10 Score=42.75 Aligned_cols=188 Identities=16% Similarity=0.165 Sum_probs=91.3
Q ss_pred ecccccccCCCccceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccC-
Q psy10286 464 STKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSP- 541 (748)
Q Consensus 464 ~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~- 541 (748)
..++.....|..-..+..+|..+++-...-. .+...-.+++.. ++..++.|+.+ ..+..||.....-..+..
T Consensus 439 s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~ 512 (694)
T 3dm0_A 439 SSDGQFALSGSWDGELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYTISEG 512 (694)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEECSS
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCcceeeccC
Confidence 3333333333344578888988765322110 011111222222 56666777754 357778876543222221
Q ss_pred CCCCcceeEEEEE--CC--EEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcce-EEEEE-CCEEEEEccCCCCc
Q psy10286 542 MCFKRSAVGAAAL--ND--KLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAG-GVIAF-DSYVYALGGHDGLS 615 (748)
Q Consensus 542 ~~~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~-~~~iyv~GG~~~~~ 615 (748)
....+....++.+ ++ ..++.|+.+ ..+..||..+.+-... +......- +++.. ++.+++.||.++
T Consensus 513 ~~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~Dg-- 583 (694)
T 3dm0_A 513 GEGHRDWVSCVRFSPNTLQPTIVSASWD-----KTVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKDG-- 583 (694)
T ss_dssp TTSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred CCCCCCcEEEEEEeCCCCcceEEEEeCC-----CeEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCCC--
Confidence 1111222223333 22 456667654 4678889877654322 11111111 22222 677788888754
Q ss_pred ccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcE
Q psy10286 616 IFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEW 677 (748)
Q Consensus 616 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 677 (748)
.+..+|..+.+-.. .+.....-++++.. ++.+++. |.+ +.+.+||..+..-
T Consensus 584 ---~i~iwd~~~~~~~~--~~~~~~~v~~~~~sp~~~~l~~-~~~-----~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 584 ---VVLLWDLAEGKKLY--SLEANSVIHALCFSPNRYWLCA-ATE-----HGIKIWDLESKSI 635 (694)
T ss_dssp ---BCEEEETTTTEEEE--CCBCSSCEEEEEECSSSSEEEE-EET-----TEEEEEETTTTEE
T ss_pred ---eEEEEECCCCceEE--EecCCCcEEEEEEcCCCcEEEE-EcC-----CCEEEEECCCCCC
Confidence 57788887775322 22222222333333 3444444 332 4588899887654
No 304
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=91.22 E-value=13 Score=37.05 Aligned_cols=214 Identities=14% Similarity=0.118 Sum_probs=100.4
Q ss_pred CccceEEEEeCCCCceEEccCCCccccee-EEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEE
Q psy10286 474 DSLSTVEVFDPLVGRWQMAEAMSMLRSRV-GVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGA 551 (748)
Q Consensus 474 ~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~ 551 (748)
..-..+..||..+++-... +....... +++.. ++.+++.|+.+ ..+..||.....-..+..-. ..-.++
T Consensus 84 s~D~~v~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~s~D-----~~i~vwd~~~~~~~~~~~h~--~~v~~~ 154 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQR--FVGHKSDVMSVDIDKKASMIISGSRD-----KTIKVWTIKGQCLATLLGHN--DWVSQV 154 (319)
T ss_dssp ETTSEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSCEEEEEETT-----SCEEEEETTSCEEEEECCCS--SCEEEE
T ss_pred eCCCEEEEEECCCCCeeEE--EccCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEEEeccC--CcEEEE
Confidence 3345788899888753221 11111111 22222 56677778755 35777887655433322111 111112
Q ss_pred EEE-------CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcce-EEEEE-CCEEEEEccCCCCcccCeEEE
Q psy10286 552 AAL-------NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAG-GVIAF-DSYVYALGGHDGLSIFDSVER 622 (748)
Q Consensus 552 ~~~-------~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~ 622 (748)
... ++..++.||.+ ..+..||..+.+-... +......- +++.. ++..++.||.++ .+..
T Consensus 155 ~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~dg-----~i~i 222 (319)
T 3frx_A 155 RVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKDG-----EIML 222 (319)
T ss_dssp EECCC------CCEEEEEETT-----SCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETTC-----EEEE
T ss_pred EEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCCC-----eEEE
Confidence 221 23356666654 3577888876653221 11111111 22222 677777887643 6888
Q ss_pred EECCCCcEEEccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCc-EEEccC-CCC---C-CcceEEEE-
Q psy10286 623 YDPKTDEWTSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDE-WKMIAS-MNV---M-RSRVALVA- 694 (748)
Q Consensus 623 yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~~~-~p~---~-r~~~~~~~- 694 (748)
||..+.+-... +.....-.+++.. ++.+++.|.. +.+.+|+..... +..+.. ... . ......+.
T Consensus 223 wd~~~~~~~~~--~~~~~~v~~~~~sp~~~~la~~~~------~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 294 (319)
T 3frx_A 223 WNLAAKKAMYT--LSAQDEVFSLAFSPNRYWLAAATA------TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAW 294 (319)
T ss_dssp EETTTTEEEEE--EECCSCEEEEEECSSSSEEEEEET------TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEE
T ss_pred EECCCCcEEEE--ecCCCcEEEEEEcCCCCEEEEEcC------CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEE
Confidence 99877653221 1111111222222 4555555432 345666655432 222211 110 0 11112222
Q ss_pred -ECCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 695 -NMGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 695 -~~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
-+++.++.|+.++ .|.+||..+
T Consensus 295 spdg~~l~sg~~Dg-----~i~vWd~~t 317 (319)
T 3frx_A 295 SADGQTLFAGYTDN-----VIRVWQVMT 317 (319)
T ss_dssp CTTSSEEEEEETTS-----CEEEEEEEE
T ss_pred CCCCCEEEEeecCc-----eEEEEEEee
Confidence 2788888888553 477777654
No 305
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=91.06 E-value=25 Score=40.04 Aligned_cols=246 Identities=14% Similarity=0.134 Sum_probs=132.8
Q ss_pred CceEEccCCCcccceeEEEEE---CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCc----ceeEEEEE----C
Q psy10286 487 GRWQMAEAMSMLRSRVGVAVM---KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKR----SAVGAAAL----N 555 (748)
Q Consensus 487 ~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r----~~~~~~~~----~ 555 (748)
.+|+.+.+-...-.-+++++. .+.+|+... . ..+++.+-...+|+.+.+.+... .......+ .
T Consensus 11 ~~w~~~~~~~~~g~i~~i~~~p~~~~~~~~~~~-~-----ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~ 84 (737)
T 2cn3_A 11 YKWDNVVIGGGGGFMPGIVFNETEKDLIYARAA-I-----GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDP 84 (737)
T ss_dssp EEEEEECCCSBCSCCCEEEECSSSTTCEEEECS-S-----SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSST
T ss_pred CeeEEcccCCCcceeeEEEECCCCCCEEEEEec-C-----CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCC
Confidence 468888754333122344443 256777431 1 35999999999999987643211 22333333 3
Q ss_pred CEEEEEeCCCC--CCC-CceEEEEeCCCCeEEEccC-CCC-----CC-cceEEEEE---CCEEEEEccCCCCcccCeEEE
Q psy10286 556 DKLYVCGGYDG--VSS-LNTVECYEPDKDQWRIVKS-MQK-----HR-SAGGVIAF---DSYVYALGGHDGLSIFDSVER 622 (748)
Q Consensus 556 ~~iyv~GG~~~--~~~-~~~~~~yd~~~~~W~~~~~-~~~-----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~ 622 (748)
+.+|+..|... ... -..+++=.-.-.+|+.+.. .+. .+ ..+.+++. .+.+|+-... + ..+++
T Consensus 85 ~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~-g----~gl~~ 159 (737)
T 2cn3_A 85 NRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC-G----NGLWR 159 (737)
T ss_dssp TCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST-T----CCEEE
T ss_pred CEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc-C----CcEEE
Confidence 58998765311 111 1345554455678998752 111 12 22445543 3567764311 1 24665
Q ss_pred EECCCCcEEEccCCCCCC--------------cceeEEEEC----------CEEEEEeccCCCccccEEEEEeCCCCcEE
Q psy10286 623 YDPKTDEWTSVKPMLTKR--------------CRLGVAALN----------NKIYVCGGYDGAIFLQSVEMYDPITDEWK 678 (748)
Q Consensus 623 yd~~~~~W~~~~~~p~~r--------------~~~~~~~~~----------~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 678 (748)
=+-.-.+|+.+..+|... .+...+.++ +.||+.-+..+ ..+++=.-.-.+|+
T Consensus 160 S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~----~~v~~S~DgG~tW~ 235 (737)
T 2cn3_A 160 STDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKN----ESIYRSTDGGVTWK 235 (737)
T ss_dssp ESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSS----CCEEEESSTTSCCE
T ss_pred eCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCC----ccEEEEcCCCCceE
Confidence 555567899987655321 112223332 25666432111 12444333456799
Q ss_pred EccCCCCCCcceEEEEE-CCEEEEEeCCCCC----CCCCeEEEEeCCCCceEecCCCCCC----CcceEEEEeecCCC
Q psy10286 679 MIASMNVMRSRVALVAN-MGKLWAIGGYDGV----SNLPTVEVYDPSTDSWAFVAPMCAH----EGGVGVGVIPICNP 747 (748)
Q Consensus 679 ~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~----~~~~~v~~yd~~~~~W~~~~~~~~~----r~~~~~~~~~~~~~ 747 (748)
.+..+|.....+.++.. ++.+|+..+.... .....+++++-...+|+.+.+.|.. +++.+.+.+.--+|
T Consensus 236 ~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~ 313 (737)
T 2cn3_A 236 AVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNP 313 (737)
T ss_dssp ECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCT
T ss_pred ECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCCC
Confidence 99877765544444433 7899987543211 1334789999999999999887653 44555444433333
No 306
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=90.91 E-value=10 Score=37.87 Aligned_cols=192 Identities=10% Similarity=0.027 Sum_probs=98.6
Q ss_pred ccccccCCCccceEEEEeCCCCceEEccCCCc--c-cceeEEEEE--CCEEEEEccCCC------------CCCCCeEEE
Q psy10286 466 KSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSM--L-RSRVGVAVM--KNRLYAFGGYNG------------SERLSTVEE 528 (748)
Q Consensus 466 ~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~--~-r~~~~~~~~--~~~iyv~GG~~~------------~~~~~~v~~ 528 (748)
++.++.... ...+..||+.++..+.+..... + ..-..+++. +|.||+.-.... ......+++
T Consensus 91 ~g~l~v~d~-~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 91 NNQLYIVDC-YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TTEEEEEET-TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred CCcEEEEEC-CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 444544421 2458889988776655432211 1 112333333 578998642210 112356999
Q ss_pred EECCCCeEEEcc-CCCCCcceeEEEEE-CC-EEEEEeCCCCCCCCceEEEEeCCC---CeEEEccCCCCCCcceEEEEE-
Q psy10286 529 FDPVRRVWNKVS-PMCFKRSAVGAAAL-ND-KLYVCGGYDGVSSLNTVECYEPDK---DQWRIVKSMQKHRSAGGVIAF- 601 (748)
Q Consensus 529 yd~~t~~W~~~~-~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~---~~W~~~~~~~~~r~~~~~~~~- 601 (748)
||+.+.+...+. .+.. ..+++.. ++ .+|+.-.. .+.+++||+.. ..++....++. -..++.-
T Consensus 170 ~d~~~~~~~~~~~~~~~---p~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d~ 238 (322)
T 2fp8_A 170 YDPSTKETTLLLKELHV---PGGAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRNA 238 (322)
T ss_dssp EETTTTEEEEEEEEESC---CCEEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEECSS---EEEEEECT
T ss_pred EeCCCCEEEEeccCCcc---CcceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEeCCC---CCCeEECC
Confidence 999888765432 1111 1234443 44 58887331 25788998875 23444333322 1223332
Q ss_pred CCEEEEEccCCCC-----cccCeEEEEECCCCcEEEccCCCC---CCcceeEEEECCEEEEEeccCCCccccEEEEEeCC
Q psy10286 602 DSYVYALGGHDGL-----SIFDSVERYDPKTDEWTSVKPMLT---KRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPI 673 (748)
Q Consensus 602 ~~~iyv~GG~~~~-----~~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 673 (748)
+|.||+....... .....+.+||+....-..+. .+. .....+++..+++|||.+.. .+.|.+|++.
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~-~~~g~~~~~~~~~~~~~g~L~v~~~~-----~~~i~~~~~~ 312 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP-LPPPFAGEHFEQIQEHDGLLYIGTLF-----HGSVGILVYD 312 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE-CCTTTTTSCCCEEEEETTEEEEECSS-----CSEEEEEEC-
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEE-CCCCCccccceEEEEeCCEEEEeecC-----CCceEEEecc
Confidence 5788887542100 01246899999755444443 121 12223444568899987543 2578888875
Q ss_pred CC
Q psy10286 674 TD 675 (748)
Q Consensus 674 ~~ 675 (748)
.+
T Consensus 313 ~~ 314 (322)
T 2fp8_A 313 KK 314 (322)
T ss_dssp --
T ss_pred cc
Confidence 43
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=90.90 E-value=4.1 Score=46.29 Aligned_cols=218 Identities=13% Similarity=0.066 Sum_probs=115.6
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCCCC-cceeEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMCFK-RSAVGA 551 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~-r~~~~~ 551 (748)
..+..++..+.....+... .+.-+++++. ++.||+.-. ....++++++.+.. ......+... ..-.++
T Consensus 386 ~~I~~id~~~~~~~~~~~~--~~~p~gla~d~~~~~Ly~sD~-----~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~gl 458 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDL-----SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 458 (699)
T ss_dssp TC-CEECTTSCCEECCSCC--CTTCCCCEEETTTTEEEECCT-----TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCE
T ss_pred cceEEEeCCCCcceeeecc--CcceEEEccccccCeEEEEec-----CCCeEEEEecCCCCCCcceEEEEeCCCCCcceE
Confidence 4677788877776655332 2223344444 678998643 22468888887510 0011111111 111233
Q ss_pred EE--ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccC--CCCCCcceEEEE--ECCEEEEEccCCCCcccCeEEEEEC
Q psy10286 552 AA--LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKS--MQKHRSAGGVIA--FDSYVYALGGHDGLSIFDSVERYDP 625 (748)
Q Consensus 552 ~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~ 625 (748)
++ .+++||+.-. ....++++|+....-..+.. +..|+ ++++ .++.||+.... ....|+++++
T Consensus 459 avD~~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~----~~~~I~~~~~ 526 (699)
T 1n7d_A 459 AVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKGGL 526 (699)
T ss_dssp ECCCSSSBCEECCT-----TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS----SSCCEEBCCS
T ss_pred EEEeeCCcEEEEec-----cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC----CCCeEEEEeC
Confidence 33 3678998632 23568899988765444422 22332 3333 36788876421 1246888887
Q ss_pred CCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCC-CCCcceEEEEECCEEEEE
Q psy10286 626 KTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMN-VMRSRVALVANMGKLWAI 702 (748)
Q Consensus 626 ~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~l~v~ 702 (748)
....-+.+..... ..-.++++- +++||+.-.. .+.|+++|+....-..+...+ ......++++.++.||+.
T Consensus 527 dG~~~~~l~~~~l-~~PnGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywt 600 (699)
T 1n7d_A 527 NGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWT 600 (699)
T ss_dssp SSCCCCEESCSSC-SSCCCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEE
T ss_pred CCCCeeEEEeCCC-CCccEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEE
Confidence 6543333321111 111233432 5789998643 368999998764444443221 112234566678899998
Q ss_pred eCCCCCCCCCeEEEEeCCCCce
Q psy10286 703 GGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~~~W 724 (748)
-. ....|.++|+.+++-
T Consensus 601 d~-----~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 601 DI-----INEAIFSANRLTGSD 617 (699)
T ss_dssp CS-----TTTCEEEEETTTEEE
T ss_pred eC-----CCCeEEEEEccCCCc
Confidence 53 224789999876543
No 308
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.75 E-value=1.3 Score=47.03 Aligned_cols=145 Identities=14% Similarity=0.098 Sum_probs=76.6
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCC-CCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQ-KHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
++.+.+.|+.++ .+..||..+......-... ....-.+++.. ++.+++.||.++ .+..+|..++...
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~-----~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG-----TTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS-----CEEEEETTSCEEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC-----EEEEeeccCCcee
Confidence 445667777553 5777887765533222221 11122233332 566777777654 4788898887665
Q ss_pred EccCCCCCCcc-eeEEE-ECCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE---CCEEEEEeCCC
Q psy10286 632 SVKPMLTKRCR-LGVAA-LNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN---MGKLWAIGGYD 706 (748)
Q Consensus 632 ~~~~~p~~r~~-~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~ 706 (748)
.+......... .++.. -++.+++.|+.+ ..|..||..... +..+........++.+ ++.+++.||.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 54332222221 22222 367788888765 368888876543 2222222222233333 34577777754
Q ss_pred CCCCCCeEEEEeCCCC
Q psy10286 707 GVSNLPTVEVYDPSTD 722 (748)
Q Consensus 707 ~~~~~~~v~~yd~~~~ 722 (748)
+ .|.+||..+.
T Consensus 273 ~-----~v~iwd~~~~ 283 (435)
T 4e54_B 273 Q-----TVKIWDLRQV 283 (435)
T ss_dssp S-----BCCEEETTTC
T ss_pred c-----eeeEEecccc
Confidence 3 4667776554
No 309
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=90.75 E-value=11 Score=35.73 Aligned_cols=138 Identities=13% Similarity=0.151 Sum_probs=78.7
Q ss_pred CCEEEEEccCCCCCCCCeEEEEE------CCCCeEEE--c----cCCC---CCcceeEEEE--ECCEEEEEeCCCCCCCC
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFD------PVRRVWNK--V----SPMC---FKRSAVGAAA--LNDKLYVCGGYDGVSSL 570 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd------~~t~~W~~--~----~~~~---~~r~~~~~~~--~~~~iyv~GG~~~~~~~ 570 (748)
.|.+|+|-| ..+|+++ ........ + +.+| ......-++. .++++|+|-|
T Consensus 13 ~ge~~fFk~-------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg------- 78 (225)
T 3oyo_A 13 EYEVYFFAK-------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG------- 78 (225)
T ss_dssp TTEEEEEET-------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET-------
T ss_pred CCEEEEEEC-------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC-------
Confidence 788999977 4688887 22111211 1 2344 1112232333 5899999988
Q ss_pred ceEEEEeCC----CCeEEEc--------cCCCCC--CcceEEE-E--ECCEEEEEccCCCCcccCeEEEEECCCCcEEE-
Q psy10286 571 NTVECYEPD----KDQWRIV--------KSMQKH--RSAGGVI-A--FDSYVYALGGHDGLSIFDSVERYDPKTDEWTS- 632 (748)
Q Consensus 571 ~~~~~yd~~----~~~W~~~--------~~~~~~--r~~~~~~-~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~- 632 (748)
+..|+||.. .+....- +.+|.. ...--+| . .++++|+|-|. ..|+||..+++...
T Consensus 79 ~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~-------~yw~~d~~~~~~~~g 151 (225)
T 3oyo_A 79 NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGN-------KYVRIAYDSKQLVGN 151 (225)
T ss_dssp TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETT-------EEEEEETTTTEEEEE
T ss_pred CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCC-------eEEEEECCCCeecCC
Confidence 578999753 2222211 123321 0022233 2 27899999884 79999977766543
Q ss_pred ---cc-CCCC------CCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCC
Q psy10286 633 ---VK-PMLT------KRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPI 673 (748)
Q Consensus 633 ---~~-~~p~------~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 673 (748)
+. ..|. +..--++... ++++|++-| +..|+||..
T Consensus 152 Pk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 152 IRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp EEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred CcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 11 1221 2222334443 789999988 688999987
No 310
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=90.70 E-value=5.7 Score=40.88 Aligned_cols=147 Identities=12% Similarity=0.081 Sum_probs=83.6
Q ss_pred EEEEECCEEEEEccCCCCCCCCeEEEEECCCCeE--EEc----cCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEE
Q psy10286 503 GVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVW--NKV----SPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVE 574 (748)
Q Consensus 503 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W--~~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 574 (748)
+++.++|.+|+|=| +.+|+++.....- ..+ +.+|.. -. ++... ++++|+|-| +..|
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~~-iD-Aa~~~~~~g~~~fFkg-------~~yW 248 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPSG-IE-AAYEIEARNQVFLFKD-------DKYW 248 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCSS-CC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCCC-cc-EEEEecCCCEEEEEeC-------CEEE
Confidence 34556999999977 4577776554321 112 234532 22 23333 799999987 5677
Q ss_pred EEeCCCCe--E-EEccC--CCCCC-cceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEE-----cc-CCC-CC
Q psy10286 575 CYEPDKDQ--W-RIVKS--MQKHR-SAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTS-----VK-PML-TK 639 (748)
Q Consensus 575 ~yd~~~~~--W-~~~~~--~~~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~~-~~p-~~ 639 (748)
+|+...-. + +.+.. +|..- .--++... ++++|+|-|. ..|+||..+++-.. +. ..| .+
T Consensus 249 r~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~-------~yw~yd~~~~~v~~gyPk~I~~~f~g~p 321 (365)
T 3ba0_A 249 LISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN-------QYWRYDERRQMMDPGYPKLITKNFQGIG 321 (365)
T ss_dssp ECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT-------EEEEEETTTTEECSSCCCCHHHHSTTCC
T ss_pred EEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC-------EEEEEeCCcceecCCCCcchhhcCCCCC
Confidence 77653211 1 12222 23211 12233333 5899999884 79999987664321 10 011 12
Q ss_pred CcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEE
Q psy10286 640 RCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKM 679 (748)
Q Consensus 640 r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 679 (748)
..--++... ++++|++-| +..|+||..+.+-..
T Consensus 322 ~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 322 PKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp SSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 223344445 889999987 689999998876544
No 311
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=90.69 E-value=9.7 Score=36.04 Aligned_cols=140 Identities=13% Similarity=0.070 Sum_probs=79.0
Q ss_pred ECCEEEEEeCCCCCCCCceEEEEe------CCCCeEEE--c----cCCCC-----CCcceEEEEECCEEEEEccCCCCcc
Q psy10286 554 LNDKLYVCGGYDGVSSLNTVECYE------PDKDQWRI--V----KSMQK-----HRSAGGVIAFDSYVYALGGHDGLSI 616 (748)
Q Consensus 554 ~~~~iyv~GG~~~~~~~~~~~~yd------~~~~~W~~--~----~~~~~-----~r~~~~~~~~~~~iyv~GG~~~~~~ 616 (748)
.+|++|+|-| ..+|+++ ........ + +.+|. ....++....++++|+|-|.
T Consensus 12 ~~ge~~fFk~-------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg~----- 79 (225)
T 3oyo_A 12 SEYEVYFFAK-------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSGN----- 79 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEETT-----
T ss_pred CCCEEEEEEC-------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcCC-----
Confidence 3789999987 4678887 22111211 1 23441 22222222258999999884
Q ss_pred cCeEEEEECCC----CcEEE----c----cCCCCC--CcceeEEEE---CCEEEEEeccCCCccccEEEEEeCCCCcEEE
Q psy10286 617 FDSVERYDPKT----DEWTS----V----KPMLTK--RCRLGVAAL---NNKIYVCGGYDGAIFLQSVEMYDPITDEWKM 679 (748)
Q Consensus 617 ~~~~~~yd~~~----~~W~~----~----~~~p~~--r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 679 (748)
..|+||..+ +.... + +.+|.. ....-++.. ++++|++-| +..|+||...++...
T Consensus 80 --~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG-------~~yw~~d~~~~~~~~ 150 (225)
T 3oyo_A 80 --HSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG-------NKYVRIAYDSKQLVG 150 (225)
T ss_dssp --EEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred --EEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC-------CeEEEEECCCCeecC
Confidence 789997632 22221 1 122321 012233332 689999988 689999977765543
Q ss_pred ----cc-CCCC------CCcceEEEE--ECCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 680 ----IA-SMNV------MRSRVALVA--NMGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 680 ----~~-~~p~------~r~~~~~~~--~~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
+. ..|. +..--++.. .++++|+|-| +..|+||..+
T Consensus 151 gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~~ 198 (225)
T 3oyo_A 151 NIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFTP 198 (225)
T ss_dssp EEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECCT
T ss_pred CCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCc
Confidence 11 1221 222223333 3799999987 4789999983
No 312
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=90.47 E-value=16 Score=37.19 Aligned_cols=190 Identities=8% Similarity=-0.066 Sum_probs=100.0
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
+|++.++++.. ....+..+|+.+.+......-.. .-.+++.. +|++++.|+. +.+..++..++.....
T Consensus 144 Dg~~la~as~~---~d~~i~iwd~~~~~~~~~~~~~~--~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 144 EGTVAAIASSK---VPAIMRIIDPSDLTEKFEIETRG--EVKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIAR 212 (365)
T ss_dssp TSSCEEEEESC---SSCEEEEEETTTTEEEEEEECSS--CCCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEE
T ss_pred CCCEEEEEECC---CCCEEEEeECCCCcEEEEeCCCC--ceEEEEEccCCceEEeccc------eeEEEEEeccCcceee
Confidence 56554443311 22468889999887544322111 11233332 6777777652 3566777777665433
Q ss_pred cCCCCCCcceE--EEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEcc--CCCCCCcceeEEEE--CCEEEEEeccCC
Q psy10286 587 KSMQKHRSAGG--VIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVK--PMLTKRCRLGVAAL--NNKIYVCGGYDG 660 (748)
Q Consensus 587 ~~~~~~r~~~~--~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~i~v~GG~~~ 660 (748)
........... +..-++..++.++.++.. ...++.+|.....+.... .+........++.+ ++++++.|+.+
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D- 290 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND- 290 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT-
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC-
Confidence 22222221112 223378888877764432 124666776666554332 11111122223333 78888888865
Q ss_pred CccccEEEEEeCCCCcEEEccCCCCC-CcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 661 AIFLQSVEMYDPITDEWKMIASMNVM-RSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 661 ~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
..|.+||..+.+- +..+..+ ......+.. ++++++-|+.+ .+|-++|...
T Consensus 291 ----~~V~iwd~~~~~~--~~~~~~gH~~~V~~v~fSpdg~~laS~S~D-----~tvrvw~ip~ 343 (365)
T 4h5i_A 291 ----NSIALVKLKDLSM--SKIFKQAHSFAITEVTISPDSTYVASVSAA-----NTIHIIKLPL 343 (365)
T ss_dssp ----SCEEEEETTTTEE--EEEETTSSSSCEEEEEECTTSCEEEEEETT-----SEEEEEECCT
T ss_pred ----CEEEEEECCCCcE--EEEecCcccCCEEEEEECCCCCEEEEEeCC-----CeEEEEEcCC
Confidence 3688999887643 2221111 122223333 78888888755 4688888754
No 313
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=90.37 E-value=6.8 Score=39.16 Aligned_cols=142 Identities=12% Similarity=0.180 Sum_probs=72.3
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEE
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTS 632 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 632 (748)
++...+.|+.+ ..+..||..+++-... +......-..+.+ ++.+++.|+.++ .+..||.....-..
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQR--FVGHKSDVMSVDIDKKASMIISGSRDK-----TIKVWTIKGQCLAT 143 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSCEEEEEETTS-----CEEEEETTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeEE--EccCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCeEEE
Confidence 66777777755 4788899888763221 1111111112222 567777777754 47778876544333
Q ss_pred ccCCCCCCcceeEEEE--------CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEE
Q psy10286 633 VKPMLTKRCRLGVAAL--------NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAI 702 (748)
Q Consensus 633 ~~~~p~~r~~~~~~~~--------~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~ 702 (748)
+..- ......+.+ ++..++.||.+ ..+..||..+.+-.. .+.........+.. ++++++.
T Consensus 144 ~~~h---~~~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~--~~~~h~~~v~~~~~sp~g~~l~s 213 (319)
T 3frx_A 144 LLGH---NDWVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEA--DFIGHNSNINTLTASPDGTLIAS 213 (319)
T ss_dssp ECCC---SSCEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEE--EECCCCSCEEEEEECTTSSEEEE
T ss_pred Eecc---CCcEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhe--eecCCCCcEEEEEEcCCCCEEEE
Confidence 2211 111111111 23356667654 367888887654322 11111112222222 5777777
Q ss_pred eCCCCCCCCCeEEEEeCCCCc
Q psy10286 703 GGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~~~ 723 (748)
||.++ .|.+||..+.+
T Consensus 214 ~~~dg-----~i~iwd~~~~~ 229 (319)
T 3frx_A 214 AGKDG-----EIMLWNLAAKK 229 (319)
T ss_dssp EETTC-----EEEEEETTTTE
T ss_pred EeCCC-----eEEEEECCCCc
Confidence 77543 57777776643
No 314
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=90.15 E-value=18 Score=39.27 Aligned_cols=199 Identities=15% Similarity=0.146 Sum_probs=95.2
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 554 (748)
..+..||.....-..+.... .....+.+ +++.++.|+.+ ..+..||.....-..+..... .-.+++..
T Consensus 366 g~v~~~~~~~~~~~~~~~~~---~~v~~~~~s~dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~--~v~~~~~s 435 (577)
T 2ymu_A 366 KTVKLWNRNGQLLQTLTGHS---SSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSS--SVWGVAFS 435 (577)
T ss_dssp SEEEEEETTCCEEEEEECCS---SCEEEEEECTTSSCEEEEETT-----SEEEEECTTCCEEEEEECCSS--CEEEEEEC
T ss_pred CEEEEEcCCCCEEEEecCCC---CCeEEEEECCCCCEEEEEeCC-----CEEEEEeCCCCEEEEecCCCC--CeEEEEEC
Confidence 45677775443333332211 11122222 56666777644 367788865443333222111 11122222
Q ss_pred -CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEEE
Q psy10286 555 -NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWTS 632 (748)
Q Consensus 555 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 632 (748)
+++.++.|+.+ ..+..||.....-..+..-. ..-.+++. -++++++.|+.++ .+..||.....-..
T Consensus 436 ~d~~~l~~~~~d-----~~v~~w~~~~~~~~~~~~~~--~~v~~~~~spd~~~las~~~d~-----~i~iw~~~~~~~~~ 503 (577)
T 2ymu_A 436 PDDQTIASASDD-----KTVKLWNRNGQLLQTLTGHS--SSVRGVAFSPDGQTIASASDDK-----TVKLWNRNGQLLQT 503 (577)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTSCEEEEEECCS--SCEEEEEECTTSCEEEEEETTS-----EEEEEETTSCEEEE
T ss_pred CCCCEEEEEcCC-----CEEEEEECCCCEEEEEcCCC--CCEEEEEEcCCCCEEEEEeCCC-----EEEEEcCCCCEEEE
Confidence 66777777754 36778887655444332211 11122222 2677777777643 57778864433222
Q ss_pred ccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEE-ECCEEEEEeCCCC
Q psy10286 633 VKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVA-NMGKLWAIGGYDG 707 (748)
Q Consensus 633 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~ 707 (748)
+.. .......+.+ +++.++.||.+ ..|.+||.....-..+.... ..-.+++. -+++.++.||.++
T Consensus 504 ~~~---h~~~v~~l~~s~dg~~l~s~~~d-----g~v~lwd~~~~~~~~~~~h~--~~v~~~~fs~dg~~l~s~~~D~ 571 (577)
T 2ymu_A 504 LTG---HSSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHS--SSVWGVAFSPDGQTIASASSDK 571 (577)
T ss_dssp EEC---CSSCEEEEEECTTSSCEEEEETT-----SEEEEECTTSCEEEEEECCS--SCEEEEEECTTSSCEEEEETTS
T ss_pred EeC---CCCCEEEEEEcCCCCEEEEEECc-----CEEEEEeCCCCEEEEEcCCC--CCEEEEEEcCCCCEEEEEeCCC
Confidence 221 1111222222 67777777754 36888886554333332111 11112222 2677777777553
No 315
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=90.10 E-value=12 Score=41.42 Aligned_cols=116 Identities=15% Similarity=0.189 Sum_probs=68.9
Q ss_pred EEEECCEEEEEeCCCCCCCCceEEEEeCCCCe--EEEccCCCCC---C---cceEEEEECCEEEEEccCCCCcccCeEEE
Q psy10286 551 AAALNDKLYVCGGYDGVSSLNTVECYEPDKDQ--WRIVKSMQKH---R---SAGGVIAFDSYVYALGGHDGLSIFDSVER 622 (748)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~---r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 622 (748)
.++.++.+|+.++. ..++.+|..+.+ |+.-...+.. . ...+.++.+++||+... ...++.
T Consensus 64 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 64 AIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp CEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred cEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 35679999998663 248999987764 9876543321 1 12344568999988542 246999
Q ss_pred EECCCCc--EEEccCCCCCC--cceeEEEECC------EEEEEeccCC-CccccEEEEEeCCCCc--EEE
Q psy10286 623 YDPKTDE--WTSVKPMLTKR--CRLGVAALNN------KIYVCGGYDG-AIFLQSVEMYDPITDE--WKM 679 (748)
Q Consensus 623 yd~~~~~--W~~~~~~p~~r--~~~~~~~~~~------~i~v~GG~~~-~~~~~~v~~yd~~~~~--W~~ 679 (748)
+|.++.+ |+.-..-+... ...+-++.++ .+|+ |...+ ......++.||..+.+ |+.
T Consensus 132 lD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 132 LNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeec
Confidence 9998774 87643221111 1122334555 5554 43211 1124579999998765 864
No 316
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=89.90 E-value=19 Score=36.95 Aligned_cols=70 Identities=10% Similarity=0.070 Sum_probs=39.4
Q ss_pred CCEEEEEeccCC----CccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCE-EEEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 649 NNKIYVCGGYDG----AIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGK-LWAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 649 ~~~i~v~GG~~~----~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-l~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
++++|+...... ....++|+++|..+.+- +..++.+...+++... +++ +++.+... .+++.+||..++
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~~g~~p~~i~~s~Dg~~~l~v~~~~----~~~V~ViD~~t~ 351 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQISLGHDVDAISVAQDGGPDLYALSAG----TEVLHIYDAGAG 351 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEECCCCcCeEEECCCCCeEEEEEcCC----CCeEEEEECCCC
Confidence 478898754211 11346899999887654 3333434333444433 554 44443321 257999998775
Q ss_pred ce
Q psy10286 723 SW 724 (748)
Q Consensus 723 ~W 724 (748)
+-
T Consensus 352 ~v 353 (373)
T 2mad_H 352 DQ 353 (373)
T ss_pred CE
Confidence 53
No 317
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.81 E-value=3.8 Score=44.82 Aligned_cols=257 Identities=11% Similarity=0.009 Sum_probs=144.7
Q ss_pred CccceEEEEeCCCCceEEccCCCcccceeEEEE----ECCEEEEEccCC------------CCCCCCeEEEEECCCCe--
Q psy10286 474 DSLSTVEVFDPLVGRWQMAEAMSMLRSRVGVAV----MKNRLYAFGGYN------------GSERLSTVEEFDPVRRV-- 535 (748)
Q Consensus 474 ~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~----~~~~iyv~GG~~------------~~~~~~~v~~yd~~t~~-- 535 (748)
...+.+.+.|+.+.+-..+-.+|....-|+++. -++++|+-+... .....+.+-+.|..+.+
T Consensus 109 ~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~ 188 (595)
T 1fwx_A 109 KANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA 188 (595)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEE
T ss_pred CCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEE
Confidence 445679999999988666546666556667665 267888876331 12234578889999875
Q ss_pred EEEc-cCCCCCcceeEEEEE-CCEEEEEeCCC-------------------------------C-CCCCceEEEEeCCCC
Q psy10286 536 WNKV-SPMCFKRSAVGAAAL-NDKLYVCGGYD-------------------------------G-VSSLNTVECYEPDKD 581 (748)
Q Consensus 536 W~~~-~~~~~~r~~~~~~~~-~~~iyv~GG~~-------------------------------~-~~~~~~~~~yd~~~~ 581 (748)
|+-. +.-| ....+.. ++.+|+..-.+ | ....+.+-+.|+.+.
T Consensus 189 ~qI~Vgg~p----d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~ 264 (595)
T 1fwx_A 189 WQVLVSGNL----DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKE 264 (595)
T ss_dssp EEEEESSCC----CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG
T ss_pred EEEEeCCCc----cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCccc
Confidence 5432 1111 1111111 22333332111 1 112356788888873
Q ss_pred eEEE-ccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCc-E---------EEccCCC-CCCcceeEEE
Q psy10286 582 QWRI-VKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDE-W---------TSVKPML-TKRCRLGVAA 647 (748)
Q Consensus 582 ~W~~-~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W---------~~~~~~p-~~r~~~~~~~ 647 (748)
+.+. +...|.+..-|++... +.++|+.++. .+.+.+||..+.+ + ..+...+ ..+-.|.+..
T Consensus 265 ~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~-----s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~ 339 (595)
T 1fwx_A 265 ASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL-----SPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFD 339 (595)
T ss_dssp GCCSSEEEEEEESSCCCEEECTTSSEEEEECTT-----SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEEC
T ss_pred CCceeEEEEecCCCceEEEEcCCCCEEEEeCCC-----CCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEEC
Confidence 3222 2334455555666665 4467777765 4679999988652 1 0111222 2234455554
Q ss_pred ECCEEEEEeccCCCccccEEEEEeCCC--------CcEEEccCCCCCCc-ceEEEE-------ECCEEEEEeCCCCCCCC
Q psy10286 648 LNNKIYVCGGYDGAIFLQSVEMYDPIT--------DEWKMIASMNVMRS-RVALVA-------NMGKLWAIGGYDGVSNL 711 (748)
Q Consensus 648 ~~~~i~v~GG~~~~~~~~~v~~yd~~~--------~~W~~~~~~p~~r~-~~~~~~-------~~~~l~v~GG~~~~~~~ 711 (748)
-+|.+|+.-..+ +++..+|..+ +.+..+..++..-. +|.... -+..+|+.-++..+..+
T Consensus 340 ~dG~aY~t~~ld-----sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~ 414 (595)
T 1fwx_A 340 GRGNAYTSLFLD-----SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFL 414 (595)
T ss_dssp TTSEEEEEETTT-----TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSC
T ss_pred CCCeEEEEEecC-----CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccc
Confidence 567888775433 5677777655 23555554444322 443332 25678887776543321
Q ss_pred -------CeEEEEeCCCCceEecCCCCCCCcceEEEEeec
Q psy10286 712 -------PTVEVYDPSTDSWAFVAPMCAHEGGVGVGVIPI 744 (748)
Q Consensus 712 -------~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 744 (748)
.+-.+||..+++-+.+.+.|....=|-+++++.
T Consensus 415 ~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~~ 454 (595)
T 1fwx_A 415 NVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVHP 454 (595)
T ss_dssp CCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEECT
T ss_pred cCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEccH
Confidence 134789999889888877776444566666653
No 318
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=89.76 E-value=5.1 Score=44.19 Aligned_cols=198 Identities=11% Similarity=-0.033 Sum_probs=97.2
Q ss_pred EECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeC--CCCeE
Q psy10286 506 VMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEP--DKDQW 583 (748)
Q Consensus 506 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~--~~~~W 583 (748)
..+|+..++++..+ ..+..|+..++.-..+..-+.. ...+.+...+++...+..++......++..+. ....-
T Consensus 30 ~~DG~~la~~s~~~----g~~~lw~~~~g~~~~lt~~~~~-~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~ 104 (582)
T 3o4h_A 30 VVDGDKLLVVGFSE----GSVNAYLYDGGETVKLNREPIN-SVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ 104 (582)
T ss_dssp EETTTEEEEEEEET----TEEEEEEEETTEEEECCSSCCS-EECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCE
T ss_pred CCCCCeEEEEEccC----CceeEEEEcCCCcEeeeccccc-ccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccc
Confidence 34666556555311 1344444445544444332211 11111222335555444322223456777877 44332
Q ss_pred EEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCc
Q psy10286 584 RIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAI 662 (748)
Q Consensus 584 ~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 662 (748)
.+...+..+ ..+... ++.++++.+.. +.+..||..+.+-..+...+. ...+..-+|+.+++++.+...
T Consensus 105 -~l~~~~~~~--~~~~s~dg~~~~~~s~~~-----~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 105 -RLEAVKPMR--ILSGVDTGEAVVFTGATE-----DRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp -ECTTSCSBE--EEEEEECSSCEEEEEECS-----SCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETT
T ss_pred -cccCCCCce--eeeeCCCCCeEEEEecCC-----CCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCC
Confidence 333322222 223333 44555555442 234477888887766654333 223333466666655543221
Q ss_pred cccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 663 FLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 663 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
...++.+|..+.+++.+..-+.. ....+.. +|+.++.+..++ ...++++|+.+++.+
T Consensus 174 -~~~i~~~d~~~g~~~~l~~~~~~--~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 174 -RVSLFTSNLSSGGLRVFDSGEGS--FSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVE 231 (582)
T ss_dssp -EEEEEEEETTTCCCEEECCSSCE--EEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEE
T ss_pred -CeEEEEEcCCCCCceEeecCCCc--cccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEE
Confidence 24699999999988877432211 1222222 565555443322 247999999998877
No 319
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=89.74 E-value=12 Score=39.63 Aligned_cols=147 Identities=11% Similarity=0.085 Sum_probs=82.5
Q ss_pred EEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEE--c----cCCCCCCcceEEEE--ECCEEEEEccCCCCcccCeEE
Q psy10286 550 GAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRI--V----KSMQKHRSAGGVIA--FDSYVYALGGHDGLSIFDSVE 621 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~--~----~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 621 (748)
+++..+|++|+|-| ...|+++.....+.. + +.+|.. .. ++.. .++++|+|=|. .+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg~-------~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKGN-------KYW 330 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEETT-------EEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeCC-------EEE
Confidence 45567999999988 456666655443321 1 123322 12 2222 27999999884 688
Q ss_pred EEECCCC--cE-EEcc---CCCCCCcce-eEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEE-----Ecc-CCC-C
Q psy10286 622 RYDPKTD--EW-TSVK---PMLTKRCRL-GVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWK-----MIA-SMN-V 685 (748)
Q Consensus 622 ~yd~~~~--~W-~~~~---~~p~~r~~~-~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~-----~~~-~~p-~ 685 (748)
+|+..+- .+ ..+. .+|..-... ++... ++++|+|-| +..|+||..+++-. .+. ..| .
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fpgi 403 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGI 403 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCCCC
Confidence 8874321 00 1111 122211122 22233 589999987 68999998754322 111 111 1
Q ss_pred CCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceEe
Q psy10286 686 MRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 686 ~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (748)
+..--+++..++++|+|-| +..|.||..+.+=..
T Consensus 404 p~~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 404 GHKVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRILT 437 (450)
T ss_dssp CSCCSEEEEETTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCCccEEEEcCCeEEEEeC-------CEEEEEECCcceEec
Confidence 1122234456899999987 468999988776544
No 320
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=89.65 E-value=3.4 Score=38.28 Aligned_cols=144 Identities=11% Similarity=0.033 Sum_probs=79.6
Q ss_pred EEEEECCEEEEEeCCCCCCCCceEEEEeCCC---CeEEEc----cCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEE
Q psy10286 550 GAAALNDKLYVCGGYDGVSSLNTVECYEPDK---DQWRIV----KSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVER 622 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~---~~W~~~----~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 622 (748)
+++..+|++|+|-| +.+|+++... +.=..+ +.+|. ...++....++++|+|-|. ..|+
T Consensus 10 A~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg~-------~yw~ 74 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKGD-------KHWV 74 (196)
T ss_dssp EEEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEETT-------EEEE
T ss_pred EEEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecCC-------EEEE
Confidence 34467999999988 5677775431 000112 13343 2222222247889999884 6899
Q ss_pred EECCCCcE---EEccC----CCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEE-----ccCC-CCCC
Q psy10286 623 YDPKTDEW---TSVKP----MLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-----IASM-NVMR 687 (748)
Q Consensus 623 yd~~~~~W---~~~~~----~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-----~~~~-p~~r 687 (748)
|+..+... ..+.. +|..+.. ++... ++++|++-| +..|+||..+++-.. +... ..+.
T Consensus 75 ~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip~ 146 (196)
T 3c7x_A 75 FDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIPE 146 (196)
T ss_dssp EETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCCS
T ss_pred EeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcCC
Confidence 98542110 12222 3322222 23322 689999987 678999987754221 1111 1112
Q ss_pred cceEEEEE-CC-EEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 688 SRVALVAN-MG-KLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 688 ~~~~~~~~-~~-~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
.-.++... ++ ++|+|-| +..+.||..+.+
T Consensus 147 ~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 147 SPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp SCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred CcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 22333333 44 9999977 468999987764
No 321
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=89.61 E-value=18 Score=36.24 Aligned_cols=176 Identities=11% Similarity=0.084 Sum_probs=86.2
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV 586 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 586 (748)
++..++.|+.+ ..+..||..+.+-...........-.+++.. ++.+++.|+.+ ..+..||..+..-..
T Consensus 138 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-----g~i~iwd~~~~~~~~- 206 (343)
T 3lrv_A 138 NTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-----GILDVYNLSSPDQAS- 206 (343)
T ss_dssp -CCEEEEEETT-----CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT-----SCEEEEESSCTTSCC-
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCCCCc-
Confidence 45677778754 3588899888765443322222222233333 77888888865 468889988765220
Q ss_pred cCCCC-CCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEE-EccCCCCCCcce--eEEEE--CCEEEEEecc
Q psy10286 587 KSMQK-HRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWT-SVKPMLTKRCRL--GVAAL--NNKIYVCGGY 658 (748)
Q Consensus 587 ~~~~~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~--~~~~~--~~~i~v~GG~ 658 (748)
..+.. ....-..+.+ ++..++.|+ ++ .+..||..+.+-. .+.......... .++.+ +++.++.|+.
T Consensus 207 ~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 207 SRFPVDEEAKIKEVKFADNGYWMVVEC-DQ-----TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp EECCCCTTSCEEEEEECTTSSEEEEEE-SS-----BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred cEEeccCCCCEEEEEEeCCCCEEEEEe-CC-----eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 01111 1111122222 566666666 22 6888998765321 111110010111 12333 4666666543
Q ss_pred -CCCccccEEEEEeCCCCcEEE----ccCCCC---CCcceEEEEECCEEEEEe
Q psy10286 659 -DGAIFLQSVEMYDPITDEWKM----IASMNV---MRSRVALVANMGKLWAIG 703 (748)
Q Consensus 659 -~~~~~~~~v~~yd~~~~~W~~----~~~~p~---~r~~~~~~~~~~~l~v~G 703 (748)
++ .-.+|.|+.....|.. .-.+.. ......++..++.+.++-
T Consensus 281 ~d~---~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 281 ESN---SLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp TTT---EEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred CCC---cEEEEEEcccccceEecCceeEecCccccccceeEEEecCCceEEEE
Confidence 22 1244555557778987 112221 222333444567766653
No 322
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=89.46 E-value=0.15 Score=53.14 Aligned_cols=182 Identities=13% Similarity=0.145 Sum_probs=74.1
Q ss_pred EEECCEEEEEccCCCCCCCCeEEEEECCCCe--EEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCC-
Q psy10286 505 AVMKNRLYAFGGYNGSERLSTVEEFDPVRRV--WNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKD- 581 (748)
Q Consensus 505 ~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~- 581 (748)
++.++.||+.+. + ..++.+|..+++ |+... .. ...+.+..++.+|+.|+.+ ..++.+|..++
T Consensus 6 ~v~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~~--~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~ 70 (369)
T 2hz6_A 6 TLPETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--DP--VLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNE 70 (369)
T ss_dssp --CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--CC--SCCCC-----CCEEECTTT-----CCEEEC-----C
T ss_pred eeeCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--CC--ceecceEcCCCEEEEeCCC-----CEEEEEECCCCc
Confidence 334667776443 2 368999988764 87643 11 1122334567788876543 35888998654
Q ss_pred -eEEEccCCCCCCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCc--EEEccCCCCCCcceeEEEECCEEEEEec
Q psy10286 582 -QWRIVKSMQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDE--WTSVKPMLTKRCRLGVAALNNKIYVCGG 657 (748)
Q Consensus 582 -~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG 657 (748)
.|+.-...+... ..+.+. .++.+|+ |+. ...++.+|+.+++ |+.-.... . ..+..++.+|+ |+
T Consensus 71 ~~w~~~~~~~~~~-~~sp~~~~~~~v~~-g~~-----dg~v~a~D~~tG~~~w~~~~~~~-~----~~~p~~~~v~~-~~ 137 (369)
T 2hz6_A 71 GLTKLPFTIPELV-QASPCRSSDGILYM-GKK-----QDIWYVIDLLTGEKQQTLSSAFA-D----SLSPSTSLLYL-GR 137 (369)
T ss_dssp CSEECSCCHHHHH-TTCSCC-----CCC-CEE-----EEEEEEECCC---------------------------EEE-EE
T ss_pred eeeeeeccCcccc-ccCceEecCCEEEE-EeC-----CCEEEEEECCCCcEEEEecCCCc-c----cccccCCEEEE-Ee
Confidence 465432211101 111122 3555553 332 2358899988654 65432110 0 11123444554 43
Q ss_pred cCCCccccEEEEEeCCCCc--EEEc-cCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCc--eEe
Q psy10286 658 YDGAIFLQSVEMYDPITDE--WKMI-ASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDS--WAF 726 (748)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~--W~~~-~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~--W~~ 726 (748)
.+ ..++.+|+.+.+ |+.- .....+.... -...++.+|+.. .+ ..++.+|+.+++ |+.
T Consensus 138 ~d-----g~v~a~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~-~d-----g~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 138 TE-----YTITMYDTKTRELRWNATYFDYAASLPED-DVDYKMSHFVSN-GD-----GLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp EE-----EEEECCCSSSSSCCCEEEEEEECCBCCCC-CTTCCCCEEEEE-TS-----CEEEEECTTTCCEEEEE
T ss_pred cC-----CEEEEEECCCCCEEEeEecccccCccccC-CccccceEEEEC-CC-----CEEEEEECCCCcEEEEe
Confidence 22 468888887654 7642 1110000000 001125566532 21 358888887764 664
No 323
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=89.11 E-value=20 Score=35.99 Aligned_cols=140 Identities=12% Similarity=0.136 Sum_probs=67.2
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEE-ccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEE
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRI-VKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTS 632 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 632 (748)
++.+.+.|+.+ ..+..||..+.+... +.. ....-.+++.. ++..++.||.++ .+..||.....-..
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~~~d~-----~i~~wd~~~~~~~~ 154 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKRFVG--HQSEVYSVAFSPDNRQILSAGAER-----EIKLWNILGECKFS 154 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEEEEC--CCSCEEEEEECSSTTEEEEEETTS-----CEEEEESSSCEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEEEcC--CCCcEEEEEECCCCCEEEEEcCCC-----EEEEEeccCCceee
Confidence 56667777755 468889988765422 111 11111122222 566667777643 57788876443333
Q ss_pred ccCCCCCCcceeEEEEC------------CEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCE
Q psy10286 633 VKPMLTKRCRLGVAALN------------NKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGK 698 (748)
Q Consensus 633 ~~~~p~~r~~~~~~~~~------------~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 698 (748)
............++.+. +..++.||.+ ..+.+||.....-..+.. .......+.+ +++
T Consensus 155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~---h~~~v~~~~~s~~g~ 226 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNFQIRYTFKA---HESNVNHLSISPNGK 226 (343)
T ss_dssp CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTTEEEEEEEC---CSSCEEEEEECTTSS
T ss_pred eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCCceeEEEcC---ccccceEEEECCCCC
Confidence 22211112222222221 1466677654 367788843321111111 1111222222 566
Q ss_pred EEEEeCCCCCCCCCeEEEEeC
Q psy10286 699 LWAIGGYDGVSNLPTVEVYDP 719 (748)
Q Consensus 699 l~v~GG~~~~~~~~~v~~yd~ 719 (748)
.++.||.++ .+.+||.
T Consensus 227 ~l~sgs~dg-----~v~iwd~ 242 (343)
T 2xzm_R 227 YIATGGKDK-----KLLIWDI 242 (343)
T ss_dssp EEEEEETTC-----EEEEEES
T ss_pred EEEEEcCCC-----eEEEEEC
Confidence 777777543 4666666
No 324
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=89.07 E-value=11 Score=38.75 Aligned_cols=147 Identities=8% Similarity=0.021 Sum_probs=82.4
Q ss_pred EEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeE--EEc----cCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEE
Q psy10286 550 GAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQW--RIV----KSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVE 621 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 621 (748)
+++..+|++|+|-| +.+|+++.....- ..+ +.+|. ... ++... ++++|+|-|. ..|
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iD-Aa~~~~~~g~~~fFkg~-------~yW 248 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPS-GIE-AAYEIEARNQVFLFKDD-------KYW 248 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCS-SCC-EEEEEGGGTEEEEEETT-------EEE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCC-Ccc-EEEEecCCCEEEEEeCC-------EEE
Confidence 34557999999977 4566665443221 111 23342 222 23333 7999999874 688
Q ss_pred EEECCCCc--E-EEccC--CCCCC-cceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEE-----ccC-CC-CC
Q psy10286 622 RYDPKTDE--W-TSVKP--MLTKR-CRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-----IAS-MN-VM 686 (748)
Q Consensus 622 ~yd~~~~~--W-~~~~~--~p~~r-~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-----~~~-~p-~~ 686 (748)
+|+..... + ..+.. +|..- .--++... ++++|++-| +..|+||..+++-.. +.. .| .+
T Consensus 249 r~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p 321 (365)
T 3ba0_A 249 LISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQGIG 321 (365)
T ss_dssp ECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTTCC
T ss_pred EEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCCCC
Confidence 88754321 1 12322 23211 11233333 589999987 689999987654221 100 11 12
Q ss_pred CcceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCCceEe
Q psy10286 687 RSRVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 687 r~~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (748)
..--++... ++++|+|=| +..|.||..+.+-..
T Consensus 322 ~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 322 PKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp SSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 222334444 899999977 468999998876554
No 325
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=89.04 E-value=22 Score=40.54 Aligned_cols=234 Identities=12% Similarity=-0.019 Sum_probs=112.5
Q ss_pred ceEEEEeCCCC-ceEEccCCCcccceeEEEEE-CC-EEEEEccCCCCCCCCeEEEEECCCCeE--EEccCCCCCcceeEE
Q psy10286 477 STVEVFDPLVG-RWQMAEAMSMLRSRVGVAVM-KN-RLYAFGGYNGSERLSTVEEFDPVRRVW--NKVSPMCFKRSAVGA 551 (748)
Q Consensus 477 ~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W--~~~~~~~~~r~~~~~ 551 (748)
..++..|..++ +. ++.. ......+.+.. ++ .||..- .+.......+++.+..+..- ..+-.-+......+.
T Consensus 201 ~~l~v~dl~~g~~~--l~~~-~~~~~~~~~WspDg~~l~y~~-~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 276 (751)
T 2xe4_A 201 YTIEFKRISDPSQT--IADK-VSGTNGEIVWGPDHTSLFYVT-KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFM 276 (751)
T ss_dssp EEEEEEETTCTTCC--CCCC-EEEECSCCEECSSTTEEEEEE-ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEE
T ss_pred EEEEEEECCCCCEe--CCcc-ccCceeeEEEecCCCEEEEEE-ECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEE
Confidence 46888998887 52 1110 01111111221 33 444432 22222234688888876531 111111222222222
Q ss_pred EEE-CC-EEEEEeCCCCCCCCceEEEEeCCCC--eE--EEccCCCCCCcceEEE-EECCEEEEEccCCCCcccCeEEEEE
Q psy10286 552 AAL-ND-KLYVCGGYDGVSSLNTVECYEPDKD--QW--RIVKSMQKHRSAGGVI-AFDSYVYALGGHDGLSIFDSVERYD 624 (748)
Q Consensus 552 ~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~--~W--~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd 624 (748)
... +| .|++..... ..+.++.+|..+. .+ +.+.+-... ..++.. ..++.+|+..-.++ .....++.+|
T Consensus 277 ~~SpDg~~l~~~~~~~---~~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~s~~~~~g~~l~~~t~~~~-a~~~~L~~~d 351 (751)
T 2xe4_A 277 YKAADTNTLCIGSQSP---ETAEVHLLDLRKGNAHNTLEIVRPREKG-VRYDVQMHGTSHLVILTNEGG-AVNHKLLIAP 351 (751)
T ss_dssp EECTTSSEEEEEEECS---SCEEEEEEESSSCTTCCCEEESSCCCTT-CCEEEEEETTTEEEEEECTTT-CTTCEEEEEE
T ss_pred EECCCCCEEEEEecCC---CCceEEEEECCCCCCCceeEEeecCCCC-ceEEEeeeeCCEEEEEeCCCC-CCCcEEEEEc
Confidence 222 55 454444321 2468899998875 45 555432111 112222 23778888865431 1235799999
Q ss_pred CCC-CcEEE-ccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeC-------CCCc-EEEccCCCCCCcceEEEE
Q psy10286 625 PKT-DEWTS-VKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDP-------ITDE-WKMIASMNVMRSRVALVA 694 (748)
Q Consensus 625 ~~~-~~W~~-~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~-------~~~~-W~~~~~~p~~r~~~~~~~ 694 (748)
..+ ..|+. +-+-.......+....++.|++....++ ...++++|+ .+.. ...+. ++.. .+....
T Consensus 352 ~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g---~~~l~~~dl~~~~~~~~~g~~~~~l~-l~~~--~~~~~~ 425 (751)
T 2xe4_A 352 RGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG---LTRIWTMMADSQDGVFKAGTGLREVV-MEEP--IFTVHL 425 (751)
T ss_dssp TTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT---EEEEEEEECCTTTSCCCTTTCCEECC-CCCS--SCEEEE
T ss_pred CCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC---EEEEEEEecccccccccCCccceEEC-CCCc--eeEEEe
Confidence 876 67875 4221111122333444778877765443 457889986 3433 34442 2222 222111
Q ss_pred -------EC-CEEEEE-eCCCCCCCCCeEEEEeCCCCceEecC
Q psy10286 695 -------NM-GKLWAI-GGYDGVSNLPTVEVYDPSTDSWAFVA 728 (748)
Q Consensus 695 -------~~-~~l~v~-GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (748)
.+ +.+++. .+.. .-.+++.||+.+++.+.+.
T Consensus 426 ~~~~~~~~~~~~l~~~~ss~~---~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 426 VESQMLEYEEPTFRMEYSSLA---TPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp CGGGCCCTTCSCEEEEEEETT---EEEEEEEECTTTCCEEEEE
T ss_pred ccCcccCCCCCEEEEEEeCCC---CCCEEEEEECCCCcEEEEe
Confidence 12 333333 2221 2246889999888776554
No 326
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=89.01 E-value=13 Score=39.16 Aligned_cols=100 Identities=15% Similarity=-0.032 Sum_probs=54.4
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCC----CCCCCCeEEEEECCCCeEEEccCCC-CC----
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYN----GSERLSTVEEFDPVRRVWNKVSPMC-FK---- 545 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~----~~~~~~~v~~yd~~t~~W~~~~~~~-~~---- 545 (748)
+.+..+|+.+++-. ..++..... .+++- ++++||.--.. .+...+.+.++|+.+++-...-+++ .+
T Consensus 99 ~~VsVID~~t~~vv--~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRIL--GMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEE--EEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEE--EEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 68999999887543 222222222 33333 55788864110 0112357999999998643221122 11
Q ss_pred -cceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeE
Q psy10286 546 -RSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQW 583 (748)
Q Consensus 546 -r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 583 (748)
..-+.++.. ++++|+..-. ..+.+.++|+.+++=
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kv 212 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTF 212 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEE
T ss_pred CCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeE
Confidence 112233333 4578886421 136789999988764
No 327
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=88.04 E-value=23 Score=35.50 Aligned_cols=213 Identities=16% Similarity=0.210 Sum_probs=108.4
Q ss_pred cceEEEEeCCCCceEEccCCCc------cc-ceeEEEE----ECCEEEEEccC----C--CC--CCCCeEEEEECC---C
Q psy10286 476 LSTVEVFDPLVGRWQMAEAMSM------LR-SRVGVAV----MKNRLYAFGGY----N--GS--ERLSTVEEFDPV---R 533 (748)
Q Consensus 476 ~~~~~~yd~~~~~W~~~~~~~~------~r-~~~~~~~----~~~~iyv~GG~----~--~~--~~~~~v~~yd~~---t 533 (748)
...+..+|+..+.-..+ ..+. +. .-.++.+ -+++|+++.-. . +. ...+.+.+||+. +
T Consensus 34 ~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~t 112 (334)
T 2p9w_A 34 KGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSEN 112 (334)
T ss_dssp TTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTT
T ss_pred CCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCC
Confidence 35788899986654444 2221 12 2244555 25788886211 0 11 124679999988 4
Q ss_pred C--eEEE-ccCCCCC-------cc-ee-EEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCe---EEEccCCCCCCcce-
Q psy10286 534 R--VWNK-VSPMCFK-------RS-AV-GAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQ---WRIVKSMQKHRSAG- 596 (748)
Q Consensus 534 ~--~W~~-~~~~~~~-------r~-~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~r~~~- 596 (748)
+ .|.. ++..... +. .. .+++- +|.+||.|... ...+++++|.... |-...+....+.+.
T Consensus 113 g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~----~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~n 188 (334)
T 2p9w_A 113 SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG----MPAIARVSADGKTVSTFAWESGNGGQRPGYS 188 (334)
T ss_dssp CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES----SCEEEEECTTSCCEEEEEECCCCSSSCCSCS
T ss_pred CCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC----CCeEEEEeCCCCEEeeeeecCCCcccccCcc
Confidence 4 3543 2211111 22 12 23332 78999976532 1569999998653 54333323334443
Q ss_pred EEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcE--EEcc--CCC-CCCccee--EEEECCEEEEEeccCCCccccEE
Q psy10286 597 GVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEW--TSVK--PML-TKRCRLG--VAALNNKIYVCGGYDGAIFLQSV 667 (748)
Q Consensus 597 ~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~--~~p-~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~v 667 (748)
+++.. +..|++..+ . ..+++||..+... ..+. ... .....-+ ....+|++++++.. .+.+
T Consensus 189 GIv~~pdg~~Liv~~~-~-----g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~-----~~~~ 257 (334)
T 2p9w_A 189 GITFDPHSNKLIAFGG-P-----RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR-----APYA 257 (334)
T ss_dssp EEEEETTTTEEEEESS-S-----SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE-----TTEE
T ss_pred eEEEeCCCCEEEEEcC-C-----CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC-----CCCE
Confidence 45555 446666655 2 3689999875432 1111 000 0011112 22368888666532 1344
Q ss_pred EEEeCCCCcEEEc---cCCCC---CCcceEEEE----ECCEEEEEeCC
Q psy10286 668 EMYDPITDEWKMI---ASMNV---MRSRVALVA----NMGKLWAIGGY 705 (748)
Q Consensus 668 ~~yd~~~~~W~~~---~~~p~---~r~~~~~~~----~~~~l~v~GG~ 705 (748)
+.+-...+ |... +..|. ++.....+. .+++||++.++
T Consensus 258 ~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 258 ISFRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EEEECSST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECC
T ss_pred EEEECCCC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeee
Confidence 55544444 8764 22232 233333333 57999999765
No 328
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=87.98 E-value=3.3 Score=43.69 Aligned_cols=143 Identities=13% Similarity=0.180 Sum_probs=69.2
Q ss_pred EEEEeCCCCCCCCceEEEEeCCCCe---EEE--ccCCCC-CCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCc
Q psy10286 558 LYVCGGYDGVSSLNTVECYEPDKDQ---WRI--VKSMQK-HRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDE 629 (748)
Q Consensus 558 iyv~GG~~~~~~~~~~~~yd~~~~~---W~~--~~~~~~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 629 (748)
+++.|+.+ ..+..||..+.. +.. ...... ...-.+++.. ++.+++.|+.+ ..+..||..+..
T Consensus 196 ~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~ 265 (430)
T 2xyi_A 196 YLLSASDD-----HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNN 265 (430)
T ss_dssp EEEEECTT-----SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSC
T ss_pred eEEEEeCC-----CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCC
Confidence 67777754 357888887621 211 111111 1111223332 56677777764 468899988652
Q ss_pred -EEEccCCCCCCcceeEEEE---CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE---CCEEEEE
Q psy10286 630 -WTSVKPMLTKRCRLGVAAL---NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN---MGKLWAI 702 (748)
Q Consensus 630 -W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~l~v~ 702 (748)
...+..+........++.+ +..+++.|+.+ ..|.+||..+.. ..+..+.........+.. +..+++.
T Consensus 266 ~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~~l~s 339 (430)
T 2xyi_A 266 TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD-----KTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNETILAS 339 (430)
T ss_dssp SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCTT-SCSEEEECCSSCEEEEEECSSCTTEEEE
T ss_pred CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEeCCCCC-CCeEEeecCCCCEEEEEECCCCCCEEEE
Confidence 1111111111122233333 33488888865 468899987632 011111111112222222 3357777
Q ss_pred eCCCCCCCCCeEEEEeCCC
Q psy10286 703 GGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~ 721 (748)
||.++ .+.+||..+
T Consensus 340 ~~~d~-----~i~iwd~~~ 353 (430)
T 2xyi_A 340 SGTDR-----RLHVWDLSK 353 (430)
T ss_dssp EETTS-----CCEEEEGGG
T ss_pred EeCCC-----cEEEEeCCC
Confidence 77543 467777655
No 329
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=86.39 E-value=32 Score=35.39 Aligned_cols=211 Identities=10% Similarity=0.043 Sum_probs=113.7
Q ss_pred ceEeecCCCCceeeccc-ccccceEE-e-cccccccCCCccceEEEEeCCCCceEEccC--CCcccceeEEEEECCEEEE
Q psy10286 439 TVEVFDPLVGRWQMAEE-ETLSNAVI-S-TKSCLTKAGDSLSTVEVFDPLVGRWQMAEA--MSMLRSRVGVAVMKNRLYA 513 (748)
Q Consensus 439 ~~~~y~~~~~~W~~~~~-~~~~~~~~-~-~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~--~~~~r~~~~~~~~~~~iyv 513 (748)
.+..+++.......+.. .....++. . ..+.++........++++++.....+.+.. +..| .+.++...++.||+
T Consensus 97 ~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd~~~g~lY~ 175 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP-GGLAVDWVHDKLYW 175 (386)
T ss_dssp CEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCC-CCEEEETTTTEEEE
T ss_pred cceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCc-cEEEEEeCCCeEEE
Confidence 45666666555544332 11122222 1 234455444445678899988776655422 2222 22232223789998
Q ss_pred EccCCCCCCCCeEEEEECCCCeEEEcc--CCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCC
Q psy10286 514 FGGYNGSERLSTVEEFDPVRRVWNKVS--PMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSM 589 (748)
Q Consensus 514 ~GG~~~~~~~~~v~~yd~~t~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 589 (748)
.-.. .+.++++++....-..+. .+..| .++++. ++.||+.--. ....++++++....-+.+..-
T Consensus 176 ~d~~-----~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~~~~~ 243 (386)
T 3v65_B 176 TDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWG----NTPRIEASSMDGSGRRIIADT 243 (386)
T ss_dssp EETT-----TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECS----SSCEEEEEETTSCSCEEEECS
T ss_pred EcCC-----CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccC----CCCEEEEEeCCCCCcEEEEEC
Confidence 7542 247888887754333221 22222 234443 6889987421 135799999876543333211
Q ss_pred CCCCcceEEEE--ECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEE
Q psy10286 590 QKHRSAGGVIA--FDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSV 667 (748)
Q Consensus 590 ~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v 667 (748)
.. ..-.++++ .+++||+.-.. ...|+++|+....-..+.... ...-.++++.++.||+..-. .+.|
T Consensus 244 ~~-~~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~-----~~~V 311 (386)
T 3v65_B 244 HL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWH-----TKSI 311 (386)
T ss_dssp SC-SCEEEEEEEGGGTEEEEEETT-----TTEEEEECTTSCSCEEEECSS-CSSEEEEEEETTEEEEEETT-----TTEE
T ss_pred CC-CCeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCCCeeEEEEECC-CCCceEEEEECCEEEEeeCC-----CCeE
Confidence 11 11123444 37899998643 357999998754322222111 12235667788999998632 3578
Q ss_pred EEEeCCC
Q psy10286 668 EMYDPIT 674 (748)
Q Consensus 668 ~~yd~~~ 674 (748)
.++|..+
T Consensus 312 ~~~~~~~ 318 (386)
T 3v65_B 312 NSANKFT 318 (386)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 8888544
No 330
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=86.28 E-value=52 Score=37.67 Aligned_cols=228 Identities=14% Similarity=0.132 Sum_probs=122.8
Q ss_pred CceEEccCCCcccceeEEEEE---CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC-----CcceeEEEEE---C
Q psy10286 487 GRWQMAEAMSMLRSRVGVAVM---KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF-----KRSAVGAAAL---N 555 (748)
Q Consensus 487 ~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~-----~r~~~~~~~~---~ 555 (748)
.+|+.+.+.... .-.++++. .+.+|+ |+.. ..+++-+-.-.+|+.+...+. .+.-+++++. .
T Consensus 4 ~~W~~~~~~~~g-~i~~i~~~p~~~~~~~a-~~~~-----ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~ 76 (789)
T 1sqj_A 4 YEFKNVAIGGGG-YITGIVAHPKTKDLLYA-RTDI-----GGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNP 76 (789)
T ss_dssp CEEEECCCCBCS-CEEEEEECSSSTTCEEE-EESS-----SCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEE
T ss_pred ccceEccCCCCC-cEEEEEECCCCCCEEEE-EecC-----CCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCC
Confidence 468888763322 22333333 245666 3322 247888878889999865331 2334444443 2
Q ss_pred CEEEEEeCCCCCCCCceEEEEeCCCCeEEEccC-CCC-----CC-cceEEEEE---CCEEEEEccCCCCcccCeEEEEEC
Q psy10286 556 DKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKS-MQK-----HR-SAGGVIAF---DSYVYALGGHDGLSIFDSVERYDP 625 (748)
Q Consensus 556 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~~~-----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~ 625 (748)
+.+|+..|.........+++=+-.-.+|+.+.. ++. .| ..+.+++. .+.+|+ |.. ...+++=+-
T Consensus 77 ~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~-g~~-----~~gl~~S~D 150 (789)
T 1sqj_A 77 DRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWM-GTR-----TEGIWKSSD 150 (789)
T ss_dssp EEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEE-ECS-----SSCEEEESS
T ss_pred CEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEE-Eec-----cCCEEEECC
Confidence 578887664221111455555556678998853 111 12 22345544 356666 332 134666555
Q ss_pred CCCcEEEccCCCC---CCcceeEEEE----CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCC-----------
Q psy10286 626 KTDEWTSVKPMLT---KRCRLGVAAL----NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMR----------- 687 (748)
Q Consensus 626 ~~~~W~~~~~~p~---~r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r----------- 687 (748)
.-.+|+.+...|. .-.......+ .+.||+..... ..+++=.-.-.+|+.+..++...
T Consensus 151 gG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-----~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~ 225 (789)
T 1sqj_A 151 RAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP-----QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDK 225 (789)
T ss_dssp TTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST-----TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTC
T ss_pred CCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC-----CeEEEEcCCCcCcccCCCCcCccccccccccCcc
Confidence 6678999876441 1122333333 24677654321 23443333456899987554322
Q ss_pred -----cceEEEEE--CCEEEEEeCCCC---CCCCCeEEEEeCCCCceEecCCCCC
Q psy10286 688 -----SRVALVAN--MGKLWAIGGYDG---VSNLPTVEVYDPSTDSWAFVAPMCA 732 (748)
Q Consensus 688 -----~~~~~~~~--~~~l~v~GG~~~---~~~~~~v~~yd~~~~~W~~~~~~~~ 732 (748)
..+.++.. ++.||+..+... ......+++.+-...+|+.+.+.|.
T Consensus 226 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~~~~ 280 (789)
T 1sqj_A 226 KPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVG 280 (789)
T ss_dssp CCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCCCTT
T ss_pred cccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECcCCCC
Confidence 11443332 789998743211 0123468888888899999887554
No 331
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=86.04 E-value=23 Score=33.27 Aligned_cols=145 Identities=14% Similarity=0.132 Sum_probs=79.3
Q ss_pred EEEEECCEEEEEeCCCCCCCCceEEEEeCCCCe-E--EEcc----CCCCCCcceEEEE-ECCEEEEEccCCCCcccCeEE
Q psy10286 550 GAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQ-W--RIVK----SMQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVE 621 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W--~~~~----~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 621 (748)
+++..+|++|+|-| +.+|+++..... . ..+. .+|. ...++... .++++|+|-|. ..|
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG~-------~yW 99 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAGN-------EYW 99 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEETT-------EEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeCC-------EEE
Confidence 45557999999988 456766654421 1 1121 2332 22222222 26899999884 789
Q ss_pred EEECCCCc---EEEccC--CCCCC-cceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEE-----cc-C-CCCC
Q psy10286 622 RYDPKTDE---WTSVKP--MLTKR-CRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKM-----IA-S-MNVM 686 (748)
Q Consensus 622 ~yd~~~~~---W~~~~~--~p~~r-~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-----~~-~-~p~~ 686 (748)
+||..+.. =..+.. +|..- .--++... ++++|++-| +..|.||..+++-.. +. . +..+
T Consensus 100 ~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g~p 172 (218)
T 1gen_A 100 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIP 172 (218)
T ss_dssp EEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSCC
T ss_pred EEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCCCC
Confidence 99852100 011111 22111 12233332 689999987 689999987764221 11 1 1112
Q ss_pred CcceEEEEEC--CEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 687 RSRVALVANM--GKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 687 r~~~~~~~~~--~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
..-.++...+ +.+|+|-| +..|.||..+..
T Consensus 173 ~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 173 DNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp SSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 2223444444 89999977 467888876554
No 332
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=86.03 E-value=35 Score=35.39 Aligned_cols=149 Identities=11% Similarity=0.003 Sum_probs=79.3
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCC-CCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC-FKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRI 585 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 585 (748)
++.+++.|+.+ ..+..||..+.+-...-..+ ....-.+++.. ++..++.|+.+ ..+..||..+.+...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCccEEE
Confidence 46777777754 47889999887543221111 11122222222 67777888765 468899988866433
Q ss_pred ccCCCCCCcceEEEEE-----CCEEEEEccCCCCcccCeEEEEECCCCcEEEc-cC----------CC------------
Q psy10286 586 VKSMQKHRSAGGVIAF-----DSYVYALGGHDGLSIFDSVERYDPKTDEWTSV-KP----------ML------------ 637 (748)
Q Consensus 586 ~~~~~~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~----------~p------------ 637 (748)
.-..+....-.+++.. ++.+++.|+.++ .+..||..+.+-... .. .|
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT-----FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTTE-----EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCCC-----cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 2111211111122111 345666666533 588888877653221 10 00
Q ss_pred --CCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc
Q psy10286 638 --TKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE 676 (748)
Q Consensus 638 --~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 676 (748)
....-.+++..++..++.||.+ ..|.+||..+.+
T Consensus 326 ~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~~wd~~~~~ 361 (437)
T 3gre_A 326 IRSLNALSTISVSNDKILLTDEAT-----SSIVMFSLNELS 361 (437)
T ss_dssp CCSGGGGCCEEEETTEEEEEEGGG-----TEEEEEETTCGG
T ss_pred cccCCceEEEEECCceEEEecCCC-----CeEEEEECCCcc
Confidence 0011123344478888888865 367788876654
No 333
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=85.78 E-value=35 Score=35.19 Aligned_cols=278 Identities=12% Similarity=0.007 Sum_probs=130.4
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeec-ccccccceEEecc-cccccCC---------CccceEEEEeCCCCce
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMA-EEETLSNAVISTK-SCLTKAG---------DSLSTVEVFDPLVGRW 489 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~-~~~~~~~~~~~~~-~~~~~~g---------~~~~~~~~yd~~~~~W 489 (748)
++++|+.-.... .....+.++|+.+++-... +........++.+ ..+|... ...+.+..+|+.+.+-
T Consensus 44 ~~~vyV~~~~~~--~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v 121 (386)
T 3sjl_D 44 ARRVYVNDPAHF--AAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP 121 (386)
T ss_dssp TTEEEEEECGGG--CSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCEEEEEcCccc--CCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeE
Confidence 567888744211 1125889999988776432 2111122333333 3344432 1245699999999875
Q ss_pred EEccCCCc-cc-----ceeEEEE--ECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC-------CcceeEEEEE
Q psy10286 490 QMAEAMSM-LR-----SRVGVAV--MKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF-------KRSAVGAAAL 554 (748)
Q Consensus 490 ~~~~~~~~-~r-----~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~-------~r~~~~~~~~ 554 (748)
..--+++. .| .-+.+++ -+.++||.... ..+.+.+.|..+++=...=+.|. ....+.+..-
T Consensus 122 ~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~----~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~ 197 (386)
T 3sjl_D 122 TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----PAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCR 197 (386)
T ss_dssp EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEET
T ss_pred EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----CCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECC
Confidence 33212221 11 1122222 25578886421 23579999999886432212221 1112223333
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEE-EECCEEEEEccCCCCcccCeEEEEECCCCc----
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVI-AFDSYVYALGGHDGLSIFDSVERYDPKTDE---- 629 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~---- 629 (748)
+|++.++.-..... +. +..+ ....+-..++..+... .-+|+++..-- ...++.+|..++.
T Consensus 198 DG~~~~v~~~~~g~----v~--~~~~---~~~~~~~~~~~~~~~~~~~dG~~~~vs~------~g~V~v~d~~~~~~~v~ 262 (386)
T 3sjl_D 198 DGSLAKVAFGTEGT----PE--ITHT---EVFHPEDEFLINHPAYSQKAGRLVWPTY------TGKIHQIDLSSGDAKFL 262 (386)
T ss_dssp TSCEEEEECCSSSC----CE--EEEC---CCCSCTTSCBCSCCEEETTTTEEEEEBT------TSEEEEEECTTSSCEEC
T ss_pred CCCEEEEECCCCCe----EE--Eeec---ceeccccccccccceeEcCCCcEEEEeC------CCEEEEEECCCCcceee
Confidence 55554443211111 10 1000 1111111223222221 13555433221 1357777765443
Q ss_pred --EEEccC-------CCCCCcceeEEEECCEEEEEeccC--C--CccccEEEEEeCCCCcEEEccCCCCCCcceEEEE-E
Q psy10286 630 --WTSVKP-------MLTKRCRLGVAALNNKIYVCGGYD--G--AIFLQSVEMYDPITDEWKMIASMNVMRSRVALVA-N 695 (748)
Q Consensus 630 --W~~~~~-------~p~~r~~~~~~~~~~~i~v~GG~~--~--~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~ 695 (748)
|..... .|......+...-++++|+.-+.+ + ...-+.|+++|.++.+-.. ..+.+..-.++.+ -
T Consensus 263 ~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~--~i~vg~~~~~lavs~ 340 (386)
T 3sjl_D 263 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA--KFEMGHEIDSINVSQ 340 (386)
T ss_dssp CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE--EEEEEEEECEEEECS
T ss_pred cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEE--EEECCCCcceEEECC
Confidence 431110 111222222222368999974321 1 1235789999998876543 3333333334444 3
Q ss_pred CC--EEEEEeCCCCCCCCCeEEEEeCCCCceEe
Q psy10286 696 MG--KLWAIGGYDGVSNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 696 ~~--~l~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (748)
++ .+|+.-+. .++|.+||..+++-..
T Consensus 341 D~~~~ly~tn~~-----~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 341 DEKPLLYALSTG-----DKTLYIHDAESGEELR 368 (386)
T ss_dssp SSSCEEEEEETT-----TTEEEEEETTTCCEEE
T ss_pred CCCeEEEEEcCC-----CCeEEEEECCCCcEEE
Confidence 54 46776442 3579999999887543
No 334
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=85.61 E-value=31 Score=34.37 Aligned_cols=184 Identities=9% Similarity=0.015 Sum_probs=101.4
Q ss_pred cccccCCCccceEEEEeCCC----CceEEc-c-CCCcccceeEEEE--ECCEEEEEccCCCCCCCCeEEEEECCCCeEEE
Q psy10286 467 SCLTKAGDSLSTVEVFDPLV----GRWQMA-E-AMSMLRSRVGVAV--MKNRLYAFGGYNGSERLSTVEEFDPVRRVWNK 538 (748)
Q Consensus 467 ~~~~~~g~~~~~~~~yd~~~----~~W~~~-~-~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~ 538 (748)
+.++........++++++.. .....+ . .+..| .++++ .++.||+.-.. .+.++++|+....-..
T Consensus 42 ~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p---~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~ 113 (316)
T 1ijq_A 42 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKT 113 (316)
T ss_dssp TEEEEEETTTTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEE
T ss_pred CEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc---CEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEE
Confidence 34444434446788888775 222222 1 22222 34444 37899997432 3578899987654333
Q ss_pred cc--CCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCC
Q psy10286 539 VS--PMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHD 612 (748)
Q Consensus 539 ~~--~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~ 612 (748)
+. .+..| .+.++. ++.||+.... ....++++++....-+.+..... ..-.+++.- +++||+.-..
T Consensus 114 ~~~~~~~~P---~~iavdp~~g~ly~~d~~----~~~~I~~~~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~- 184 (316)
T 1ijq_A 114 LFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK- 184 (316)
T ss_dssp EEECTTCCE---EEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETT-
T ss_pred EEECCCCCc---ceEEeCCCCCEEEEEccC----CCCeEEEEcCCCCCeEEEEECCC-CCceEEEEeccCCEEEEEECC-
Confidence 22 23222 244443 7899987531 12578999987654443322111 122344443 6899998654
Q ss_pred CCcccCeEEEEECCCCcEEEccCC-CCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc
Q psy10286 613 GLSIFDSVERYDPKTDEWTSVKPM-LTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE 676 (748)
Q Consensus 613 ~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 676 (748)
.+.++++|+....-..+... .....-.++++.++.+|+.-.. .+.|.++|+.+.+
T Consensus 185 ----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~-----~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 185 ----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII-----NEAIFSANRLTGS 240 (316)
T ss_dssp ----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT-----TTEEEEEETTTCC
T ss_pred ----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECC-----CCeEEEEeCCCCc
Confidence 35799999875433333221 1122335677778999998632 3688999876543
No 335
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=85.61 E-value=47 Score=36.54 Aligned_cols=180 Identities=12% Similarity=0.086 Sum_probs=94.9
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEcc-CC-----CCCcce
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVS-PM-----CFKRSA 548 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~-~~-----~~~r~~ 548 (748)
..+..||..+.+... .+.........+.. ++.+++.||.+ ..+..||..+++....- .. .....-
T Consensus 170 ~~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D-----~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V 242 (611)
T 1nr0_A 170 NTVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGD-----GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSV 242 (611)
T ss_dssp SCEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEECBCTTSSSCSSSSCE
T ss_pred CeEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECC-----CcEEEEECCCCcEeeeeccccccccccCCCE
Confidence 456777766543322 12211112222222 67788888855 36888898876543321 10 111112
Q ss_pred eEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCC-CcceEEEEECCEEEEEccCCCCcccCeEEEEECC
Q psy10286 549 VGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKH-RSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPK 626 (748)
Q Consensus 549 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 626 (748)
.+++.. +++.++.||.+ ..+..||..+.+....-..... ......+..++..++.++.++ .+..+|+.
T Consensus 243 ~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~-----~i~~~~~~ 312 (611)
T 1nr0_A 243 FGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG-----FINFVNPE 312 (611)
T ss_dssp EEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTC-----CEEEEETT
T ss_pred EEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCC-----cEEEEeCC
Confidence 223332 67777888755 4788999988876543222211 112223334666666666543 47778887
Q ss_pred CCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEc
Q psy10286 627 TDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMI 680 (748)
Q Consensus 627 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 680 (748)
+.+-... +.........+.+ +++.++.|+.+ ..+..+|..+......
T Consensus 313 ~~~~~~~--~~gh~~~v~~l~~spdg~~l~s~s~D-----~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 313 LGSIDQV--RYGHNKAITALSSSADGKTLFSADAE-----GHINSWDISTGISNRV 361 (611)
T ss_dssp TTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEC
T ss_pred CCCcceE--EcCCCCCEEEEEEeCCCCEEEEEeCC-----CcEEEEECCCCceeee
Confidence 7653222 1111111222223 67777788765 3678899888765543
No 336
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=85.13 E-value=13 Score=42.07 Aligned_cols=58 Identities=10% Similarity=-0.153 Sum_probs=31.9
Q ss_pred ceEEEEeCCCCceEEccCCCccc--ceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEcc
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLR--SRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVS 540 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~ 540 (748)
..++.+|..+++-..+....... .......-+|+..+++.. ..++.+|..+++...+.
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEE
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC------CeEEEEECCCCceEEEe
Confidence 57889999988776665432211 111111225544444432 36888888776655443
No 337
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=84.45 E-value=35 Score=35.80 Aligned_cols=245 Identities=13% Similarity=0.068 Sum_probs=118.0
Q ss_pred CcEEEEEcCccCCCCCCcceEeecCCCCceeeccc-ccccceEEecc-cccccCC---------CccceEEEEeCCCCce
Q psy10286 421 MGHIFAVGGLTKAGDSLSTVEVFDPLVGRWQMAEE-ETLSNAVISTK-SCLTKAG---------DSLSTVEVFDPLVGRW 489 (748)
Q Consensus 421 ~~~i~v~GG~~~~~~~~~~~~~y~~~~~~W~~~~~-~~~~~~~~~~~-~~~~~~g---------~~~~~~~~yd~~~~~W 489 (748)
..++|+.-.... . ....+.++|+.+++-...-+ .......++.+ ..+|+.. ...+.+..+|+.+++-
T Consensus 84 ~~~vyV~n~~~~-~-~~~~VsVID~~t~~vv~~I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 84 ARRVYIQDPAHF-A-AITQQFVIDGSTGRILGMTDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp TTEEEEEECTTT-C-SSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCEEEEECCCcC-C-CCCeEEEEECCCCEEEEEEECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 457888754211 1 11689999998876643221 11122333333 3333332 1346799999999875
Q ss_pred EEccCCC-ccc-------ceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC-------CcceeEEEEE
Q psy10286 490 QMAEAMS-MLR-------SRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF-------KRSAVGAAAL 554 (748)
Q Consensus 490 ~~~~~~~-~~r-------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~-------~r~~~~~~~~ 554 (748)
..--+++ .+| .+..+..-++++||..-. ..+.+.++|..+++=...=+.+. ....+.+..-
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~ 237 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCR 237 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEET
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcC
Confidence 3221122 111 122222235678886421 23679999999886432211211 1111222222
Q ss_pred CCEEEEEeCCCCC--------------------------------CCCceEEEEeCCCC------eEEEccCC-------
Q psy10286 555 NDKLYVCGGYDGV--------------------------------SSLNTVECYEPDKD------QWRIVKSM------- 589 (748)
Q Consensus 555 ~~~iyv~GG~~~~--------------------------------~~~~~~~~yd~~~~------~W~~~~~~------- 589 (748)
+|+++++.-..+. .....++..|..++ +|+....-
T Consensus 238 dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 238 DGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp TSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence 4444433321110 00123555565433 23322110
Q ss_pred CCCCcceEEEEECCEEEEEccCCC--C--cccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CC--EEEEEeccCCCc
Q psy10286 590 QKHRSAGGVIAFDSYVYALGGHDG--L--SIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NN--KIYVCGGYDGAI 662 (748)
Q Consensus 590 ~~~r~~~~~~~~~~~iyv~GG~~~--~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~--~i~v~GG~~~~~ 662 (748)
|......+...-++++|+.-...+ . ...+.+.++|+.+.+- +...+.++.-++++.- ++ .+|+..+.
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv--v~~I~vg~~P~gia~spDg~~~lyv~n~~---- 391 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER--INKIELGHEIDSINVSQDAEPLLYALSAG---- 391 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEEEEEEEECEEEECCSSSCEEEEEETT----
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE--EEEEECCCCcCeEEEccCCCEEEEEEcCC----
Confidence 111111222222578999753211 1 1246899999988753 3333444434444443 34 56666532
Q ss_pred cccEEEEEeCCCCcEE
Q psy10286 663 FLQSVEMYDPITDEWK 678 (748)
Q Consensus 663 ~~~~v~~yd~~~~~W~ 678 (748)
.++|.++|..+.+-.
T Consensus 392 -s~~VsVID~~t~kvv 406 (426)
T 3c75_H 392 -TQTLHIYDAATGEEL 406 (426)
T ss_dssp -TTEEEEEETTTCCEE
T ss_pred -CCeEEEEECCCCCEE
Confidence 368999998876543
No 338
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=84.39 E-value=39 Score=34.58 Aligned_cols=114 Identities=9% Similarity=-0.137 Sum_probs=58.5
Q ss_pred CEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--CCEEEEEeCCCC----CCCCceEEEEeCCCCe
Q psy10286 509 NRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL--NDKLYVCGGYDG----VSSLNTVECYEPDKDQ 582 (748)
Q Consensus 509 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~----~~~~~~~~~yd~~~~~ 582 (748)
..+|+.-+.... ....+.+||+.+++- +..++.+... ..+.. +..+|+..-... ....+.+..||+.+.+
T Consensus 33 ~~~yv~~~~~~~-~~~~v~v~D~~t~~~--~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 33 RRSYINLPAHHS-AIIQQWVLDAGSGSI--LGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CEEEEeCCcccC-CccEEEEEECCCCeE--EEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 356776431111 111789999988763 3445544433 33332 457888753211 1124678899998754
Q ss_pred EEEccCCC-CCCc-----ceEEEE--ECCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 583 WRIVKSMQ-KHRS-----AGGVIA--FDSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 583 W~~~~~~~-~~r~-----~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
-...-+++ .+|. -...+. -+..+|+..-.. .+.+..+| .+++-.
T Consensus 109 ~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~----~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 109 PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA----GPAVGLVV-QGGSSD 160 (373)
T ss_pred EEEEEECCCccccccCCCccceEECCCCCEEEEEecCC----CCeEEEEE-CCCCEE
Confidence 32211222 1111 112222 255777764211 25689999 887644
No 339
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=84.22 E-value=56 Score=36.23 Aligned_cols=212 Identities=14% Similarity=0.150 Sum_probs=123.2
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEE-
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAA- 553 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~- 553 (748)
.++...|..+..-..+-+++..+.-.++++. ++.||+.-.. ...++++++.....+.+..... ..-.++++
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~-----~~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD 88 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS-----LKTISRAFMNGSALEHVVEFGL-DYPEGMAVD 88 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSC-SCCCEEEEE
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC-----CCeEEEEECCCCCcEEEEeCCC-CCcceEEEE
Confidence 5677888876554444344333445566655 6899997542 3578899987665554432211 11234454
Q ss_pred -ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc--cCCCCCCcceEEEEE--CCEEEEEc-cCCCCcccCeEEEEECCC
Q psy10286 554 -LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV--KSMQKHRSAGGVIAF--DSYVYALG-GHDGLSIFDSVERYDPKT 627 (748)
Q Consensus 554 -~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~r~~~~~~~~--~~~iyv~G-G~~~~~~~~~~~~yd~~~ 627 (748)
.+++||+.-. ....++++++....=+.+ ..+..| .++++. +|.||+.- |. ...+++.++..
T Consensus 89 ~~~~~LY~tD~-----~~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g~-----~~~I~r~~~dG 155 (628)
T 4a0p_A 89 WLGKNLYWADT-----GTNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEWGG-----KPKIDRAAMDG 155 (628)
T ss_dssp TTTTEEEEEET-----TTTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEECSS-----SCEEEEEETTS
T ss_pred eCCCEEEEEEC-----CCCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCCCC-----CCEEEEEeCCC
Confidence 4789999744 236789998865532222 233333 244444 68999875 32 35799999876
Q ss_pred CcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEcc-CCCCCCcceEEEEECCEEEEEeC
Q psy10286 628 DEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIA-SMNVMRSRVALVANMGKLWAIGG 704 (748)
Q Consensus 628 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~l~v~GG 704 (748)
..-+.+.. .-..-.+.+.- +++||+.-.. .+.|+.+|+....=+.+. .++ .-.++++.+++||+.--
T Consensus 156 ~~~~~l~~--~~~~P~GlalD~~~~~LY~aD~~-----~~~I~~~d~dG~~~~v~~~~l~---~P~glav~~~~ly~tD~ 225 (628)
T 4a0p_A 156 SERTTLVP--NVGRANGLTIDYAKRRLYWTDLD-----TNLIESSNMLGLNREVIADDLP---HPFGLTQYQDYIYWTDW 225 (628)
T ss_dssp CSCEEEEC--SCSSEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECCS---CEEEEEEETTEEEEEET
T ss_pred CceEEEEC--CCCCcceEEEccccCEEEEEECC-----CCEEEEEcCCCCceEEeeccCC---CceEEEEECCEEEEecC
Confidence 65544432 11111233333 5899998643 468999998653323332 222 23567777899998842
Q ss_pred CCCCCCCCeEEEEeCCCC
Q psy10286 705 YDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~ 722 (748)
....|+++|..++
T Consensus 226 -----~~~~I~~~dk~tg 238 (628)
T 4a0p_A 226 -----SRRSIERANKTSG 238 (628)
T ss_dssp -----TTTEEEEEETTTC
T ss_pred -----CCCEEEEEECCCC
Confidence 2245777776543
No 340
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=84.22 E-value=0.81 Score=37.79 Aligned_cols=48 Identities=13% Similarity=0.308 Sum_probs=40.2
Q ss_pred hhhHHHHHHHhhcceeEEEecc-cHHHHHHHhhhcCcHHHHHHHHHHHh
Q psy10286 219 SCRAMEALINFAYSGRVTIHSQ-NVQSLMVVASFLQMQKVADACADFLK 266 (748)
Q Consensus 219 ~~~~~~~ll~~~y~~~~~~~~~-~~~~l~~~a~~~~l~~l~~~c~~~l~ 266 (748)
+...|+.+++|+++|.+.+..+ ....++..|++|+|+.|++.|++-|.
T Consensus 57 dp~~F~~IL~~lr~g~l~~p~~~~~~~l~~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 57 DPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp CHHHHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHhCCCeeCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 5678888999999998876443 34789999999999999999988765
No 341
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=83.60 E-value=5.5 Score=37.81 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=58.7
Q ss_pred ECCEEEEEeCCCCCCCCceEEEEe--CCC--CeEE----Ec----cCCCC---C-CcceEEEE-ECCEEEEEccCCCCcc
Q psy10286 554 LNDKLYVCGGYDGVSSLNTVECYE--PDK--DQWR----IV----KSMQK---H-RSAGGVIA-FDSYVYALGGHDGLSI 616 (748)
Q Consensus 554 ~~~~iyv~GG~~~~~~~~~~~~yd--~~~--~~W~----~~----~~~~~---~-r~~~~~~~-~~~~iyv~GG~~~~~~ 616 (748)
.++++|+|-| +.+|+|+ +.+ +.-. .+ +.+|. + ...++... .++++|+|-|.
T Consensus 71 ~~g~~~fFKg-------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG~----- 138 (227)
T 3lp9_A 71 ENNEAFIFYE-------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKGD----- 138 (227)
T ss_dssp STTEEEEEET-------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEETT-----
T ss_pred CCCEEEEEeC-------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEECC-----
Confidence 5899999988 5788998 321 1111 11 12331 1 22222222 26899999884
Q ss_pred cCeEEEEECCCCcEEE-----cc-CCCCC------CcceeEEE--ECCEEEEEeccCCCccccEEEEEeCCCC
Q psy10286 617 FDSVERYDPKTDEWTS-----VK-PMLTK------RCRLGVAA--LNNKIYVCGGYDGAIFLQSVEMYDPITD 675 (748)
Q Consensus 617 ~~~~~~yd~~~~~W~~-----~~-~~p~~------r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 675 (748)
..|+||..+++-.. +. .+|.. ..--++.. .++++|++-| +..|.||..++
T Consensus 139 --~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 139 --QYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp --EEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred --EEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 79999987653211 11 12211 12223333 2589999987 68899998776
No 342
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=83.48 E-value=0.39 Score=49.95 Aligned_cols=142 Identities=14% Similarity=0.177 Sum_probs=58.4
Q ss_pred EEECCEEEEEeCCCCCCCCceEEEEeCCCCe--EEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCC-
Q psy10286 552 AALNDKLYVCGGYDGVSSLNTVECYEPDKDQ--WRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTD- 628 (748)
Q Consensus 552 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~- 628 (748)
++.++.+|+.+. + ..++.+|..+++ |+... . ....+.+..++.+|+.|+.+ ..++.+|.++.
T Consensus 6 ~v~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~ 70 (369)
T 2hz6_A 6 TLPETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNE 70 (369)
T ss_dssp --CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTT-----CCEEEC-----C
T ss_pred eeeCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCC-----CEEEEEECCCCc
Confidence 344677776543 2 368999987764 87654 1 11123344567788887553 35899998654
Q ss_pred -cEEEccCCCCCCcceeEEE-ECCEEEEEeccCCCccccEEEEEeCCCCc--EEEccCCCCCCcceEEEEECCEEEEEeC
Q psy10286 629 -EWTSVKPMLTKRCRLGVAA-LNNKIYVCGGYDGAIFLQSVEMYDPITDE--WKMIASMNVMRSRVALVANMGKLWAIGG 704 (748)
Q Consensus 629 -~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~l~v~GG 704 (748)
.|..-...+... ..+.+. .++.+| +|+. ...++.+|+++.+ |+.-..-. ...+..++.||+ |+
T Consensus 71 ~~w~~~~~~~~~~-~~sp~~~~~~~v~-~g~~-----dg~v~a~D~~tG~~~w~~~~~~~-----~~~~p~~~~v~~-~~ 137 (369)
T 2hz6_A 71 GLTKLPFTIPELV-QASPCRSSDGILY-MGKK-----QDIWYVIDLLTGEKQQTLSSAFA-----DSLSPSTSLLYL-GR 137 (369)
T ss_dssp CSEECSCCHHHHH-TTCSCC-----CC-CCEE-----EEEEEEECCC---------------------------EEE-EE
T ss_pred eeeeeeccCcccc-ccCceEecCCEEE-EEeC-----CCEEEEEECCCCcEEEEecCCCc-----ccccccCCEEEE-Ee
Confidence 565422111100 111111 345554 3432 2468899988654 65432110 111123445554 43
Q ss_pred CCCCCCCCeEEEEeCCCCc--eEe
Q psy10286 705 YDGVSNLPTVEVYDPSTDS--WAF 726 (748)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~~--W~~ 726 (748)
.+ ..+..+|+.+++ |+.
T Consensus 138 ~d-----g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 138 TE-----YTITMYDTKTRELRWNA 156 (369)
T ss_dssp EE-----EEEECCCSSSSSCCCEE
T ss_pred cC-----CEEEEEECCCCCEEEeE
Confidence 22 257888887764 763
No 343
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=83.40 E-value=17 Score=34.09 Aligned_cols=136 Identities=17% Similarity=0.241 Sum_probs=75.1
Q ss_pred ECCEEEEEccCCCCCCCCeEEEEECCCCeE--EEc----cCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCC
Q psy10286 507 MKNRLYAFGGYNGSERLSTVEEFDPVRRVW--NKV----SPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDK 580 (748)
Q Consensus 507 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W--~~~----~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 580 (748)
.+|.+|+|=| +.+|+++.....+ ..+ +.+|... -++...++++|+|-| +.+|+|+..+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~~I--DAA~~~~~~~yfFkG-------~~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPSTV--DAAFSWEDKLYLIQD-------TKVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCSSC--SEEEEETTEEEEEET-------TEEEEEECSS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCCCc--cEEEEECCcEEEecC-------CEEEEEeCCC
Confidence 3788999877 4577776543221 122 2344322 234445999999988 5789998653
Q ss_pred C-eE-----EEcc---CCCCC--Cc-ceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCC---cEEEccCCCCCCcce
Q psy10286 581 D-QW-----RIVK---SMQKH--RS-AGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTD---EWTSVKPMLTKRCRL 643 (748)
Q Consensus 581 ~-~W-----~~~~---~~~~~--r~-~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~ 643 (748)
+ += +.+. .+|.. .. --++... ++++|+|-|. ..|+||..+. .|...+..| ....
T Consensus 91 ~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~-------~ywr~d~~~~P~~i~~~~~g~p-~~vd- 161 (219)
T 1hxn_A 91 GYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR-------RLWWLDLKSGAQATWTELPWPH-EKVD- 161 (219)
T ss_dssp SCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT-------EEEEEEGGGGGGCCCEEECCSC-SCCS-
T ss_pred CceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCC-------EEEEEeCCCCceEhhhcCCCCC-CCcC-
Confidence 2 11 1121 12322 11 2233332 6899999884 7899996542 333322222 2222
Q ss_pred eEEE------------ECCEEEEEeccCCCccccEEEEEeCCC
Q psy10286 644 GVAA------------LNNKIYVCGGYDGAIFLQSVEMYDPIT 674 (748)
Q Consensus 644 ~~~~------------~~~~i~v~GG~~~~~~~~~v~~yd~~~ 674 (748)
++.. .++.+|++-| +..|.||..+
T Consensus 162 Aa~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~~~ 197 (219)
T 1hxn_A 162 GALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRHVD 197 (219)
T ss_dssp EEEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESSHH
T ss_pred EEEEccccccccceeccCCeEEEEEC-------CEEEEEeCCc
Confidence 2333 3467999887 5677887643
No 344
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=83.23 E-value=30 Score=32.40 Aligned_cols=136 Identities=15% Similarity=0.214 Sum_probs=75.6
Q ss_pred ECCEEEEEeCCCCCCCCceEEEEeCCCCeE--EEcc----CCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCC
Q psy10286 554 LNDKLYVCGGYDGVSSLNTVECYEPDKDQW--RIVK----SMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKT 627 (748)
Q Consensus 554 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~----~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 627 (748)
.+|++|+|-| +..|+++.....+ ..+. .+|. .--++...++++|+|-|. .+|+|+..+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~--~IDAA~~~~~~~yfFkG~-------~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS--TVDAAFSWEDKLYLIQDT-------KVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCS--SCSEEEEETTEEEEEETT-------EEEEEECSS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCC--CccEEEEECCcEEEecCC-------EEEEEeCCC
Confidence 4899999987 4566666543221 1221 2332 222344458999999884 799998753
Q ss_pred CcEEEcc----------CCCCC--CcceeEEE-E--CCEEEEEeccCCCccccEEEEEeCCC---CcEEEccCCCCCCcc
Q psy10286 628 DEWTSVK----------PMLTK--RCRLGVAA-L--NNKIYVCGGYDGAIFLQSVEMYDPIT---DEWKMIASMNVMRSR 689 (748)
Q Consensus 628 ~~W~~~~----------~~p~~--r~~~~~~~-~--~~~i~v~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~ 689 (748)
+. +... .+|.. ....-+|. . ++++|++-| +..|.||..+ ..|...+.+|.. -.
T Consensus 91 ~~-~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p~~-vd 161 (219)
T 1hxn_A 91 GY-TLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHEK-VD 161 (219)
T ss_dssp SC-EECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCSC-CS
T ss_pred Cc-eecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCCCC-cC
Confidence 21 1221 12322 11223333 2 589999988 6789999654 234433333222 22
Q ss_pred eEEEE-----------ECCEEEEEeCCCCCCCCCeEEEEeCCC
Q psy10286 690 VALVA-----------NMGKLWAIGGYDGVSNLPTVEVYDPST 721 (748)
Q Consensus 690 ~~~~~-----------~~~~l~v~GG~~~~~~~~~v~~yd~~~ 721 (748)
++... .++.+|+|-| +.-+.||..+
T Consensus 162 Aa~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~~~ 197 (219)
T 1hxn_A 162 GALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRHVD 197 (219)
T ss_dssp EEEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESSHH
T ss_pred EEEEccccccccceeccCCeEEEEEC-------CEEEEEeCCc
Confidence 22221 3568999977 3567777643
No 345
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=82.58 E-value=71 Score=36.20 Aligned_cols=241 Identities=17% Similarity=0.112 Sum_probs=129.5
Q ss_pred ceEEEEeCCCCceEEccCCCccc----cee-EEEEE---CCEEEEEccCCCC--C-CCCeEEEEECCCCeEEEccC-CC-
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLR----SRV-GVAVM---KNRLYAFGGYNGS--E-RLSTVEEFDPVRRVWNKVSP-MC- 543 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r----~~~-~~~~~---~~~iyv~GG~~~~--~-~~~~v~~yd~~t~~W~~~~~-~~- 543 (748)
..+++.+-.-.+|+.+.+.+... ... ++++. .+.||+..|.... . ....+++=.-.-.+|+.+.. .+
T Consensus 45 ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~ 124 (737)
T 2cn3_A 45 GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKM 124 (737)
T ss_dssp SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCC
T ss_pred CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCccc
Confidence 46899998889999987643211 223 33332 3579987653111 1 12345555555678988742 11
Q ss_pred ----CCc-ceeEEEEE---CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCC--------------cceEEEEE
Q psy10286 544 ----FKR-SAVGAAAL---NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHR--------------SAGGVIAF 601 (748)
Q Consensus 544 ----~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r--------------~~~~~~~~ 601 (748)
..+ ..+.+++. .+.+|+... .+ ..+++=+-...+|+.+..+|... .+...+.+
T Consensus 125 ~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g----~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~ 199 (737)
T 2cn3_A 125 GGNMPGRSMGERLAIDPNDNRILYLGTR-CG----NGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVF 199 (737)
T ss_dssp CTTSTTTTSCCCEEECSSCTTCEEEECS-TT----CCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEE
T ss_pred CCCcCcccccceEEECCCCCCEEEEeec-cC----CcEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEc
Confidence 112 12344443 256776431 11 23454444456899987665321 01122232
Q ss_pred C----------CEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CCEEEEEeccCC----CccccE
Q psy10286 602 D----------SYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NNKIYVCGGYDG----AIFLQS 666 (748)
Q Consensus 602 ~----------~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~----~~~~~~ 666 (748)
+ +.||+.-+..+ ..+++=.-.-.+|+.+..+|.....+.++.- ++.+|+..+-.. ......
T Consensus 200 dp~~~~~~~~~~~v~~~~~~~~----~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~ 275 (737)
T 2cn3_A 200 DKSSSTPGNPTKTIYVGVADKN----ESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQ 275 (737)
T ss_dssp CGGGSCTTSCCSCEEEEESCSS----CCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEE
T ss_pred CCCCcccCCCCCEEEEEecCCC----ccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCce
Confidence 1 26776432111 1355544446689999877664443444433 678888764321 113457
Q ss_pred EEEEeCCCCcEEEccCCCCC----CcceEEEEE----CCEEEEEeCCCCCCCCCeEEEEeCCCCceEec
Q psy10286 667 VEMYDPITDEWKMIASMNVM----RSRVALVAN----MGKLWAIGGYDGVSNLPTVEVYDPSTDSWAFV 727 (748)
Q Consensus 667 v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~----~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (748)
+++++....+|+.+...|.. +++++.+.+ .+.||+.+.... .....+++=.=...+|+.+
T Consensus 276 v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~~~-~~~~~l~~S~DgG~tW~~~ 343 (737)
T 2cn3_A 276 VWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAW-WPDEYIFRSTDGGATWKNI 343 (737)
T ss_dssp EEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEECCC-SSCCCEEEESSTTSSCEES
T ss_pred EEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecccC-CCCccEEEeCCCCccccch
Confidence 99999999999999776543 444544444 267888765311 0112244333334678776
No 346
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=82.31 E-value=56 Score=36.68 Aligned_cols=278 Identities=8% Similarity=0.024 Sum_probs=128.2
Q ss_pred cceEeecCCCCce---eecccccccceEEecccccccCCCccceEEEEeCCCCceEEccCCCcccc---e----------
Q psy10286 438 STVEVFDPLVGRW---QMAEEETLSNAVISTKSCLTKAGDSLSTVEVFDPLVGRWQMAEAMSMLRS---R---------- 501 (748)
Q Consensus 438 ~~~~~y~~~~~~W---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~~~~~r~---~---------- 501 (748)
.+++.+|..+++. ..+.. .......++++.....+ .-..++.+|..+++-.++..-..... +
T Consensus 90 ~~i~~~d~~~g~~~~~~~l~~-~~~~~~~SPDG~~la~~-~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~ 167 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNELPR-PIQYLCWSPVGSKLAYV-YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEM 167 (719)
T ss_dssp EEEEEEETTTTEECCSSCCCS-SBCCEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHT
T ss_pred eEEEEEECCCCccccceecCc-ccccceECCCCCEEEEE-ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeec
Confidence 4688888888776 44432 22333444443321111 12578899988877666542221110 0
Q ss_pred ----eEEEEE-CCEEEEEccCCCC-----------------------------CCCCeEEEEECCCCe---EEEccCC--
Q psy10286 502 ----VGVAVM-KNRLYAFGGYNGS-----------------------------ERLSTVEEFDPVRRV---WNKVSPM-- 542 (748)
Q Consensus 502 ----~~~~~~-~~~iyv~GG~~~~-----------------------------~~~~~v~~yd~~t~~---W~~~~~~-- 542 (748)
.+.+.. +|+..+++..+.. .....++.+|..+++ |..+...
T Consensus 168 ~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 247 (719)
T 1z68_A 168 LATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAM 247 (719)
T ss_dssp TCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHH
T ss_pred ccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCcc
Confidence 122222 5555555443211 122368888888765 2233211
Q ss_pred --CCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEe----CCCCeEEEccC----CCCCCcc-----eEEEEECC-EE
Q psy10286 543 --CFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYE----PDKDQWRIVKS----MQKHRSA-----GGVIAFDS-YV 605 (748)
Q Consensus 543 --~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd----~~~~~W~~~~~----~~~~r~~-----~~~~~~~~-~i 605 (748)
.........+.. ++++++.... .......++.+| +.++++..+.. -...... .....-+| .+
T Consensus 248 ~~~~~~~~~~~~~SpD~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 326 (719)
T 1z68_A 248 IASSDYYFSWLTWVTDERVCLQWLK-RVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISY 326 (719)
T ss_dssp HHTSCEEEEEEEESSSSEEEEEEEE-SSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCE
T ss_pred CCCCcceEEEeEEeCCCeEEEEEec-cccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeE
Confidence 011111222222 6776665321 112235788899 77766554431 1111111 11222244 45
Q ss_pred EEE-ccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccC-CCccccEEEEEeCCCC--cEEEcc
Q psy10286 606 YAL-GGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYD-GAIFLQSVEMYDPITD--EWKMIA 681 (748)
Q Consensus 606 yv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~-~~~~~~~v~~yd~~~~--~W~~~~ 681 (748)
++. ...++ ...++.+|..+.+...+.......... ...-++.||+.+... .......+|..+..+. +.+.+.
T Consensus 327 ~~~~~~~~g---~~~l~~~~~~~~~~~~lt~~~~~v~~~-~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~ 402 (719)
T 1z68_A 327 YKIFSDKDG---YKHIHYIKDTVENAIQITSGKWEAINI-FRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVT 402 (719)
T ss_dssp EEEEECTTS---CEEEEEESSCSTTCEECSCSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESS
T ss_pred EEEEEccCC---ceEEEEEECCCCceEecccCceEEEEE-EEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceecc
Confidence 543 33333 357999999888766664322111111 122344566655330 1112346777777554 345553
Q ss_pred C-CCCCCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 682 S-MNVMRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 682 ~-~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
. ++........+.. +++.+++.+... ..+.+++||..+++.
T Consensus 403 ~~~~~~~~~~~~~~~s~dg~~l~~~~s~~--~~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 403 CHLRKERCQYYTASFSDYAKYYALVCYGP--GIPISTLHDGRTDQE 446 (719)
T ss_dssp TTTTTTTBCBEEEEECGGGSSEEEEECCB--SSCEEEEECSSSCCE
T ss_pred CccCCCCCceEEEEECCCCCEEEEEcCCC--CCCeEEEEECCCCCE
Confidence 2 2212222222222 344334322111 224688888877653
No 347
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=81.93 E-value=25 Score=39.66 Aligned_cols=187 Identities=10% Similarity=0.025 Sum_probs=98.9
Q ss_pred ccccccCCCccceEEEEeCCC----CceEEcc--CCCcccceeEEEE--ECCEEEEEccCCCCCCCCeEEEEECCCCeEE
Q psy10286 466 KSCLTKAGDSLSTVEVFDPLV----GRWQMAE--AMSMLRSRVGVAV--MKNRLYAFGGYNGSERLSTVEEFDPVRRVWN 537 (748)
Q Consensus 466 ~~~~~~~g~~~~~~~~yd~~~----~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 537 (748)
.+.+|........++++++.. ..-..+. .+..| .++++ .++.||+.-. ....++++++....-.
T Consensus 417 ~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P---~glavD~~~g~LY~tD~-----~~~~I~v~d~dg~~~~ 488 (699)
T 1n7d_A 417 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRK 488 (699)
T ss_dssp TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--C---CCEECCCSSSBCEECCT-----TTSCEEEEBSSSCCEE
T ss_pred cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCc---ceEEEEeeCCcEEEEec-----cCCeEEEEecCCCceE
Confidence 444555544456778888764 1111111 11112 22333 4678988632 2356899998876544
Q ss_pred EccC--CCCCcceeEEEE--ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccC
Q psy10286 538 KVSP--MCFKRSAVGAAA--LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGH 611 (748)
Q Consensus 538 ~~~~--~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~ 611 (748)
.+.. +..|+ ++++ .++.||+..- .....++++++....-+.+..-.. ..-.++++- +++||+.-..
T Consensus 489 ~l~~~~~~~P~---giavDp~~g~ly~td~----~~~~~I~~~~~dG~~~~~l~~~~l-~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 489 TLFREQGSKPR---AIVVDPVHGFMYWTDW----GTPAKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp EECCCSSCCCC---CEECCSSSSCCEECCC----SSSCCEEBCCSSSCCCCEESCSSC-SSCCCEEECTTTCCEEEEETT
T ss_pred EEEeCCCCCcc---eEEEccCCCcEEEccc----CCCCeEEEEeCCCCCeeEEEeCCC-CCccEEEEeccCCEEEEEecC
Confidence 4322 22332 2333 2678887531 112467777765443322221111 111234442 6789987654
Q ss_pred CCCcccCeEEEEECCCCcEEEccCCC-CCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCcEE
Q psy10286 612 DGLSIFDSVERYDPKTDEWTSVKPML-TKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDEWK 678 (748)
Q Consensus 612 ~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 678 (748)
...|+++|+....-..+...+ ......++++.++.||+.-.. .+.|.++|+.+.+-.
T Consensus 561 -----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~-----~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 561 -----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII-----NEAIFSANRLTGSDV 618 (699)
T ss_dssp -----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECST-----TTCEEEEETTTEEEE
T ss_pred -----CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCC-----CCeEEEEEccCCCce
Confidence 457999998754444443221 122335667788899998732 357889998765433
No 348
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=81.26 E-value=30 Score=35.15 Aligned_cols=116 Identities=16% Similarity=0.148 Sum_probs=59.0
Q ss_pred CEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--CCEEEEEeCCCC----CCCCceEEEEeCCCCe
Q psy10286 509 NRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL--NDKLYVCGGYDG----VSSLNTVECYEPDKDQ 582 (748)
Q Consensus 509 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~----~~~~~~~~~yd~~~~~ 582 (748)
.++||.-........+.+++||+.+.+-.. .++..... .++.. +..+|+..-..+ ...-+.+..||+.+.+
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~--~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLG--MVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEE--EEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEE--EecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 356665432112223578999988876432 23333333 33333 457888752110 0123568999998765
Q ss_pred EEEccCCCCCC-----cceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEE
Q psy10286 583 WRIVKSMQKHR-----SAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWT 631 (748)
Q Consensus 583 W~~~~~~~~~r-----~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 631 (748)
-...-+++..+ .-+.++.. +..+|+.... ..+.+.++|+.+++-.
T Consensus 93 ~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----~~~~v~v~d~~~~~~~ 144 (361)
T 2oiz_A 93 FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----PATSIGIVDVAKGDYV 144 (361)
T ss_dssp EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES----SSEEEEEEETTTTEEE
T ss_pred EEEEEEcCccccccCCCcceEEECCCCCEEEEECCC----CCCeEEEEECCCCcEE
Confidence 32221222111 12233332 4577776421 0256889999887543
No 349
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=80.89 E-value=52 Score=33.51 Aligned_cols=128 Identities=13% Similarity=0.134 Sum_probs=79.8
Q ss_pred CCCCceE--EccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEE-EE------CCCCeEEEccC-CCCCcceeEEEE
Q psy10286 484 PLVGRWQ--MAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEE-FD------PVRRVWNKVSP-MCFKRSAVGAAA 553 (748)
Q Consensus 484 ~~~~~W~--~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~-yd------~~t~~W~~~~~-~~~~r~~~~~~~ 553 (748)
...+.|+ .++..|..-.-|+.+.+++.-|++|=.++......+-. |- |..-.=+.++. ....-+..+.-.
T Consensus 267 F~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvky 346 (670)
T 3ju4_A 267 FHKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKY 346 (670)
T ss_dssp STTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEE
T ss_pred eccCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhh
Confidence 3455674 45666766677999999988889986665544444322 21 11122233333 222334455556
Q ss_pred ECCEEEEEe-CCCCCCCCceEEEEeCCCCeEEEccC-CCCCCcceEEEEECCEEEEEccC
Q psy10286 554 LNDKLYVCG-GYDGVSSLNTVECYEPDKDQWRIVKS-MQKHRSAGGVIAFDSYVYALGGH 611 (748)
Q Consensus 554 ~~~~iyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~~-~~~~r~~~~~~~~~~~iyv~GG~ 611 (748)
++|.+|+.- |..+...-+.+.+-+.....|+.+.- -........-+..++.||+||..
T Consensus 347 YdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 347 YDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp ETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred hCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 799999884 44444555678888888889988742 22233444567789999999975
No 350
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=80.88 E-value=51 Score=33.39 Aligned_cols=152 Identities=9% Similarity=0.027 Sum_probs=81.1
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEc
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSV 633 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 633 (748)
+|+..++++.+ .-..+..||+.+.+......- ...-.+++.. ++++++.|+. +.+..++..+......
T Consensus 144 Dg~~la~as~~---~d~~i~iwd~~~~~~~~~~~~--~~~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 144 EGTVAAIASSK---VPAIMRIIDPSDLTEKFEIET--RGEVKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIAR 212 (365)
T ss_dssp TSSCEEEEESC---SSCEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEE
T ss_pred CCCEEEEEECC---CCCEEEEeECCCCcEEEEeCC--CCceEEEEEccCCceEEeccc------eeEEEEEeccCcceee
Confidence 66655543311 124688899988775443221 1111223322 5666666653 3577788777765433
Q ss_pred cCCCCCCcceeE--EEECCEEEEEeccCCCccccEEEEEeCCCCcEEEcc--CCCCCCcceEEEEE--CCEEEEEeCCCC
Q psy10286 634 KPMLTKRCRLGV--AALNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIA--SMNVMRSRVALVAN--MGKLWAIGGYDG 707 (748)
Q Consensus 634 ~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~l~v~GG~~~ 707 (748)
............ ..-++..++.++.++.. ...++.+|.....+.... .+........++.+ ++++++.|+.++
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 222222222222 23378888888765432 225667777666554432 12222222233333 788888888653
Q ss_pred CCCCCeEEEEeCCCCc
Q psy10286 708 VSNLPTVEVYDPSTDS 723 (748)
Q Consensus 708 ~~~~~~v~~yd~~~~~ 723 (748)
.|.+||.++.+
T Consensus 292 -----~V~iwd~~~~~ 302 (365)
T 4h5i_A 292 -----SIALVKLKDLS 302 (365)
T ss_dssp -----CEEEEETTTTE
T ss_pred -----EEEEEECCCCc
Confidence 58999987764
No 351
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=80.65 E-value=21 Score=33.69 Aligned_cols=140 Identities=10% Similarity=0.051 Sum_probs=76.2
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCC----CeEEE----c----cCCCC-----CCcceEEEEECCEEEEEccCCCCccc
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDK----DQWRI----V----KSMQK-----HRSAGGVIAFDSYVYALGGHDGLSIF 617 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~----~~W~~----~----~~~~~-----~r~~~~~~~~~~~iyv~GG~~~~~~~ 617 (748)
+|++|+|-| +..|+++... +.... + +.+|. .....+.-..++++|+|-|.
T Consensus 15 ~ge~yfFkg-------~~~wr~~~~~~~~~~~~~~~P~~I~~~W~~Lp~~~f~p~~iDaaf~~~~g~~~fFKg~------ 81 (227)
T 3lp9_A 15 NNEAYFFIN-------DKYVLLDYAPGSSRDKVLYGPTPVRDGFKSLNQTIFGSYGIDCSFDTENNEAFIFYEN------ 81 (227)
T ss_dssp TTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHSGGGTTSHHHHHCCSEEEECSTTEEEEEETT------
T ss_pred CCeEEEEEC-------CEEEEEeCCCCCccccccCCceEHhhcCCcCCcccCCCCCceEEEECCCCEEEEEeCC------
Confidence 689999977 4677776521 22211 1 22321 12222222358999999884
Q ss_pred CeEEEEE--CCCCcEE------Ecc----CCCC---CCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEE-
Q psy10286 618 DSVERYD--PKTDEWT------SVK----PMLT---KRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKM- 679 (748)
Q Consensus 618 ~~~~~yd--~~~~~W~------~~~----~~p~---~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~- 679 (748)
.+|+|+ +.+.... .+. .+|. +..--++... ++++|++-| +..|+||..+++-..
T Consensus 82 -~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG-------~~yw~~d~~~~~~~~g 153 (227)
T 3lp9_A 82 -FCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG-------DQYARIDYGSNSMVNK 153 (227)
T ss_dssp -EEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEETTTTEESSS
T ss_pred -EEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC-------CEEEEEeCCCccccCC
Confidence 789998 3221111 111 2331 1111223232 689999988 689999987653211
Q ss_pred ----cc-CCCCC------CcceEEEE--ECCEEEEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 680 ----IA-SMNVM------RSRVALVA--NMGKLWAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 680 ----~~-~~p~~------r~~~~~~~--~~~~l~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
+. .+|.. ..--++.. .++++|+|-| +.-|.||..+.
T Consensus 154 yPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 154 EIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp SCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred CCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 11 12211 11223333 3689999977 46799998776
No 352
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=80.10 E-value=18 Score=40.76 Aligned_cols=166 Identities=9% Similarity=-0.110 Sum_probs=81.2
Q ss_pred CCEEEEEccCCCC----CCCCeEEEEECCCCeEEEccCCCCC--cceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCC
Q psy10286 508 KNRLYAFGGYNGS----ERLSTVEEFDPVRRVWNKVSPMCFK--RSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKD 581 (748)
Q Consensus 508 ~~~iyv~GG~~~~----~~~~~v~~yd~~t~~W~~~~~~~~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 581 (748)
+|+..+++..+.. .....++.+|..+.+-..+...... +....+..-+|+..+++.. ..++.+|..++
T Consensus 71 Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~------~~i~~~~~~~g 144 (723)
T 1xfd_A 71 DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE------NNIYYCAHVGK 144 (723)
T ss_dssp TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET------TEEEEESSSSS
T ss_pred CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC------CeEEEEECCCC
Confidence 5665555543322 2246899999998876555432211 1111122225554445442 36888888776
Q ss_pred eEEEccCCCCCCc----------------ceEEEEE--CCEEEEEccCCCC-----------------------------
Q psy10286 582 QWRIVKSMQKHRS----------------AGGVIAF--DSYVYALGGHDGL----------------------------- 614 (748)
Q Consensus 582 ~W~~~~~~~~~r~----------------~~~~~~~--~~~iyv~GG~~~~----------------------------- 614 (748)
....+........ ....... +|+.++++..++.
T Consensus 145 ~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 224 (723)
T 1xfd_A 145 QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSE 224 (723)
T ss_dssp CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSC
T ss_pred ceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCC
Confidence 6554432211100 0012222 4544444432210
Q ss_pred cccCeEEEEECCCCcE-EEccCCCCC---CcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEc
Q psy10286 615 SIFDSVERYDPKTDEW-TSVKPMLTK---RCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMI 680 (748)
Q Consensus 615 ~~~~~~~~yd~~~~~W-~~~~~~p~~---r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 680 (748)
.....++.+|..+.+- ..+...... ......+.+ +++++++....+ .....++.+|..+.+...+
T Consensus 225 ~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 225 NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA-QNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT-SCEEEEEEEETTTCCEEEE
T ss_pred CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC-CCeEEEEEEeCCCCcceEE
Confidence 0123788899887762 444321110 111222223 677665554322 2245789999988876554
No 353
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=79.94 E-value=90 Score=35.68 Aligned_cols=240 Identities=13% Similarity=0.131 Sum_probs=128.0
Q ss_pred eEEEEeCCCCceEEccCCCc-----ccceeEEEEE---CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccC-CC-----
Q psy10286 478 TVEVFDPLVGRWQMAEAMSM-----LRSRVGVAVM---KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSP-MC----- 543 (748)
Q Consensus 478 ~~~~yd~~~~~W~~~~~~~~-----~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~-~~----- 543 (748)
.+++-+-.-.+|+.+...+. .+.-+++++. .+.+|+..|.........+++=+-.-.+|+.+.. ++
T Consensus 38 gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~ 117 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGAND 117 (789)
T ss_dssp CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTS
T ss_pred CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccC
Confidence 46777777778998865331 2334455544 2568887664221111456665556678998743 11
Q ss_pred CCc-ceeEEEEE---CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCC---CCcceEEEEE----CCEEEEEccCC
Q psy10286 544 FKR-SAVGAAAL---NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQK---HRSAGGVIAF----DSYVYALGGHD 612 (748)
Q Consensus 544 ~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~---~r~~~~~~~~----~~~iyv~GG~~ 612 (748)
..| ..+.+++. .+.+|+ |... ..+++=+-.-.+|+.+..+|. .-.......+ .+.||+.....
T Consensus 118 ~~~~~~~~iav~p~~~~~v~~-g~~~-----~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 191 (789)
T 1sqj_A 118 MGRNNGERLAVNPFNSNEVWM-GTRT-----EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP 191 (789)
T ss_dssp TTTTSCCCEEEETTEEEEEEE-ECSS-----SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST
T ss_pred CCccceeEEEEcCCCCCEEEE-Eecc-----CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC
Confidence 122 22334443 346666 3321 345554445678999876541 1122233332 34677755321
Q ss_pred CCcccCeEEEEECCCCcEEEccCCCCCC----------------cceeEEEE--CCEEEEEeccCC---CccccEEEEEe
Q psy10286 613 GLSIFDSVERYDPKTDEWTSVKPMLTKR----------------CRLGVAAL--NNKIYVCGGYDG---AIFLQSVEMYD 671 (748)
Q Consensus 613 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r----------------~~~~~~~~--~~~i~v~GG~~~---~~~~~~v~~yd 671 (748)
..+++=.-.-.+|+.+..++... ..+.++.. ++.||+..+... ......+++.+
T Consensus 192 -----~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~ 266 (789)
T 1sqj_A 192 -----QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQN 266 (789)
T ss_dssp -----TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEE
T ss_pred -----CeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEe
Confidence 23554444456899987544321 11444433 788998843211 01245788888
Q ss_pred CCCCcEEEccCCCCC---------Cc---ce-EEEEE---CCEEEEEeCCCCC-CCCCeEEEEeCCCCceEecC
Q psy10286 672 PITDEWKMIASMNVM---------RS---RV-ALVAN---MGKLWAIGGYDGV-SNLPTVEVYDPSTDSWAFVA 728 (748)
Q Consensus 672 ~~~~~W~~~~~~p~~---------r~---~~-~~~~~---~~~l~v~GG~~~~-~~~~~v~~yd~~~~~W~~~~ 728 (748)
-...+|+.+...|.. .+ +. .+++. .+.||+.++.... .....+++=+=...+|+.+.
T Consensus 267 DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~~~~~~l~~S~DgG~tW~~~~ 340 (789)
T 1sqj_A 267 RTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPALDSIYLSTDAGATWKDVT 340 (789)
T ss_dssp TTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSCSSCCCEEEESSTTSSEEEHH
T ss_pred CCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCCcccccEEEecCCCCCceeCc
Confidence 888999998764431 12 32 33332 3568877653210 01134555554567899886
No 354
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=79.73 E-value=60 Score=33.49 Aligned_cols=151 Identities=13% Similarity=0.105 Sum_probs=72.6
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCC--eEEEccCCC----CCcceeEEEEE--CC-EEEEEeCCCCCCCCceEEEEeC
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRR--VWNKVSPMC----FKRSAVGAAAL--ND-KLYVCGGYDGVSSLNTVECYEP 578 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~----~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~ 578 (748)
++.+++.| .+ ..+..||..+. .+..+...+ .......++.+ ++ .+++.|+.+ ..+..||.
T Consensus 188 ~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~ 256 (447)
T 3dw8_B 188 DYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK-----GTIRLCDM 256 (447)
T ss_dssp TSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT-----SCEEEEET
T ss_pred CCCEEEEe-CC-----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC-----CeEEEEEC
Confidence 55566655 22 46888888732 222221111 11111222232 44 778888765 36788888
Q ss_pred CCCeE-----EEccCCCCC--C--------cceEEEEE-CCEEEEEccCCCCcccCeEEEEECCC-CcEE-EccCCCCCC
Q psy10286 579 DKDQW-----RIVKSMQKH--R--------SAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKT-DEWT-SVKPMLTKR 640 (748)
Q Consensus 579 ~~~~W-----~~~~~~~~~--r--------~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~-~~~~~p~~r 640 (748)
.+... .....-..+ + .-.+++.. ++..++.|+. ..+..||..+ .+-. .+......+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~------~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY------LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES------SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC------CeEEEEeCCCCccccceeecccccc
Confidence 77652 222111100 0 11122222 5566666654 4688899875 3211 000000000
Q ss_pred c-------------ceeEEE-ECCEEEEEeccCCCccccEEEEEeCCCCcEEEc
Q psy10286 641 C-------------RLGVAA-LNNKIYVCGGYDGAIFLQSVEMYDPITDEWKMI 680 (748)
Q Consensus 641 ~-------------~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 680 (748)
. ...++. -++..++.|+.+ ..+.+||..+.+-..+
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----g~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----NFFRMFDRNTKRDITL 379 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----TEEEEEETTTCCEEEE
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccC-----CEEEEEEcCCCcceee
Confidence 0 011222 256666777764 4788999988776553
No 355
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=79.68 E-value=71 Score=34.37 Aligned_cols=209 Identities=17% Similarity=0.168 Sum_probs=102.0
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEE-E
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAA-L 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~ 554 (748)
..+..+|.....-..+..... .-.+++.. ++..++.|+.+ ..+..||.....-..+..-..+ -.+++. -
T Consensus 325 ~~i~~w~~~~~~~~~~~~~~~--~v~~~~~s~~g~~l~~~~~d-----g~v~~~~~~~~~~~~~~~~~~~--v~~~~~s~ 395 (577)
T 2ymu_A 325 KTVKLWNRNGQHLQTLTGHSS--SVWGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSSS--VRGVAFSP 395 (577)
T ss_dssp SCEEEEETTSCEEEEECCCSS--CEEEEEECTTSSEEEEEETT-----SEEEEEETTCCEEEEEECCSSC--EEEEEECT
T ss_pred CeEEEEeCCCCeeEEEeCCCC--CEEEEEECCCCCEEEEEeCC-----CEEEEEcCCCCEEEEecCCCCC--eEEEEECC
Confidence 346666765554433322111 11222222 56677777644 3577788655443333221111 112222 2
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEEEc
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWTSV 633 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 633 (748)
+++.++.|+.+ ..+..||.....-..+..... .-.+++. -+++.++.|+.++ .+..||.....-..+
T Consensus 396 dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~--~v~~~~~s~d~~~l~~~~~d~-----~v~~w~~~~~~~~~~ 463 (577)
T 2ymu_A 396 DGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSS--SVWGVAFSPDDQTIASASDDK-----TVKLWNRNGQLLQTL 463 (577)
T ss_dssp TSSCEEEEETT-----SEEEEECTTCCEEEEEECCSS--CEEEEEECTTSSEEEEEETTS-----EEEEEETTSCEEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCEEEEecCCCC--CeEEEEECCCCCEEEEEcCCC-----EEEEEECCCCEEEEE
Confidence 66777777754 367788865443333321111 1112222 2566777776643 577888765444333
Q ss_pred cCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEE--ECCEEEEEeCCCCCC
Q psy10286 634 KPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVA--NMGKLWAIGGYDGVS 709 (748)
Q Consensus 634 ~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~ 709 (748)
... ......+.+ ++++++.|+.+ ..+.+||.....-..+... ......+. -++++++.||.++
T Consensus 464 ~~~---~~~v~~~~~spd~~~las~~~d-----~~i~iw~~~~~~~~~~~~h---~~~v~~l~~s~dg~~l~s~~~dg-- 530 (577)
T 2ymu_A 464 TGH---SSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGH---SSSVRGVAFSPDGQTIASASDDK-- 530 (577)
T ss_dssp ECC---SSCEEEEEECTTSCEEEEEETT-----SEEEEEETTSCEEEEEECC---SSCEEEEEECTTSSCEEEEETTS--
T ss_pred cCC---CCCEEEEEEcCCCCEEEEEeCC-----CEEEEEcCCCCEEEEEeCC---CCCEEEEEEcCCCCEEEEEECcC--
Confidence 221 112222222 67788888754 3678888654433333211 11122222 2677777777543
Q ss_pred CCCeEEEEeCCCC
Q psy10286 710 NLPTVEVYDPSTD 722 (748)
Q Consensus 710 ~~~~v~~yd~~~~ 722 (748)
.|.+||....
T Consensus 531 ---~v~lwd~~~~ 540 (577)
T 2ymu_A 531 ---TVKLWNRNGQ 540 (577)
T ss_dssp ---EEEEECTTSC
T ss_pred ---EEEEEeCCCC
Confidence 5788886443
No 356
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=79.66 E-value=55 Score=33.05 Aligned_cols=208 Identities=12% Similarity=0.059 Sum_probs=113.2
Q ss_pred eEeecCCCCceeeccc-ccccceEE-e-cccccccCCCccceEEEEeCCCCceEEccC--CCcccceeEEEE--ECCEEE
Q psy10286 440 VEVFDPLVGRWQMAEE-ETLSNAVI-S-TKSCLTKAGDSLSTVEVFDPLVGRWQMAEA--MSMLRSRVGVAV--MKNRLY 512 (748)
Q Consensus 440 ~~~y~~~~~~W~~~~~-~~~~~~~~-~-~~~~~~~~g~~~~~~~~yd~~~~~W~~~~~--~~~~r~~~~~~~--~~~~iy 512 (748)
+..+++.......+.. .....++. . ..+.++........++++++.....+.+.. +..| .++++ .++.||
T Consensus 55 I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~ly 131 (349)
T 3v64_C 55 IRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLY 131 (349)
T ss_dssp EEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC---CEEEEETTTTEEE
T ss_pred eEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCc---cEEEEecCCCeEE
Confidence 5566665555544322 11112222 1 234455444445678888887766544322 2222 23444 378999
Q ss_pred EEccCCCCCCCCeEEEEECCCCeEEEcc--CCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccC
Q psy10286 513 AFGGYNGSERLSTVEEFDPVRRVWNKVS--PMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKS 588 (748)
Q Consensus 513 v~GG~~~~~~~~~v~~yd~~t~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 588 (748)
+.-.. .+.++++++....-..+. .+..| .++++. ++.||+.-... ...++++++....-+.+..
T Consensus 132 ~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~ 199 (349)
T 3v64_C 132 WTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIAD 199 (349)
T ss_dssp EEETT-----TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEESCC
T ss_pred EEcCC-----CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCCCCCcEEEEE
Confidence 87542 357889998765433322 22223 234443 68999875311 3679999987654344322
Q ss_pred CCCCCcceEEEE--ECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccE
Q psy10286 589 MQKHRSAGGVIA--FDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQS 666 (748)
Q Consensus 589 ~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~ 666 (748)
-.. ..-.+++. .+++||+.-.. ...++++|+....-..+.... ...-.++++.++.||+.... .+.
T Consensus 200 ~~~-~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~-----~~~ 267 (349)
T 3v64_C 200 THL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWH-----TKS 267 (349)
T ss_dssp SSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTEEEEEETT-----TTE
T ss_pred CCC-CCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEeCC-CCCceEEEEECCEEEEecCC-----CCe
Confidence 111 11124444 37899998643 357999998754323322111 12235666788999998643 357
Q ss_pred EEEEeCCC
Q psy10286 667 VEMYDPIT 674 (748)
Q Consensus 667 v~~yd~~~ 674 (748)
|..+|..+
T Consensus 268 V~~~~~~~ 275 (349)
T 3v64_C 268 INSANKFT 275 (349)
T ss_dssp EEEEETTT
T ss_pred EEEEEccC
Confidence 88888544
No 357
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=79.18 E-value=54 Score=32.65 Aligned_cols=213 Identities=13% Similarity=0.095 Sum_probs=115.9
Q ss_pred ceEEEEeCCCCc--eEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCC---eEEEccCCCCCccee
Q psy10286 477 STVEVFDPLVGR--WQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRR---VWNKVSPMCFKRSAV 549 (748)
Q Consensus 477 ~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~---~W~~~~~~~~~r~~~ 549 (748)
+++..+|+.... ...+ .+......++... ++.||+.-- ....++++++... ++.....+..+ .
T Consensus 13 ~~I~~i~l~~~~~~~~~~--~~~~~~~~~ld~d~~~~~lyw~D~-----~~~~I~r~~~~g~~~~~~~~~~~l~~p---~ 82 (318)
T 3sov_A 13 RDLRLVDATNGKENATIV--VGGLEDAAAVDFVFSHGLIYWSDV-----SEEAIKRTEFNKTESVQNVVVSGLLSP---D 82 (318)
T ss_dssp EEEEEEETTCTTSCCEEE--EEEEEEEEEEEEEGGGTEEEEEET-----TTTEEEEEETTSSSCCCEEEEECCSCC---C
T ss_pred CeEEEEECCCCceEEEEE--ecCCCccEEEEEEeCCCEEEEEEC-----CCCcEEEEEccCCCceEEEEcCCCCCc---c
Confidence 567777777653 2111 1111233344444 589999753 2357899998765 23222222222 2
Q ss_pred EEEE--ECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEc--cCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEE
Q psy10286 550 GAAA--LNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIV--KSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERY 623 (748)
Q Consensus 550 ~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~y 623 (748)
+.++ .++.||+.-.. ...++++++....-+.+ ..+..| .+.++. ++.||+.--. ....++++
T Consensus 83 glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~----~~~~I~r~ 150 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSE-----TNRIEVSNLDGSLRKVLFWQELDQP---RAIALDPSSGFMYWTDWG----EVPKIERA 150 (318)
T ss_dssp EEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSSE---EEEEEEGGGTEEEEEECS----SSCEEEEE
T ss_pred EEEEEcCCCeEEEEECC-----CCEEEEEECCCCcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC----CCCEEEEE
Confidence 3444 37899987542 25788898876543333 222223 233443 6899987521 13579999
Q ss_pred ECCCCcEEEccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEE
Q psy10286 624 DPKTDEWTSVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWA 701 (748)
Q Consensus 624 d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v 701 (748)
++....-+.+..-.. ..-.+.+.- +++||+.-.. .+.|+.+|.....-+.+..-. ...-.++++.++.+|+
T Consensus 151 ~~dG~~~~~~~~~~l-~~Pnglavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~-~~~P~glav~~~~lyw 223 (318)
T 3sov_A 151 GMDGSSRFIIINSEI-YWPNGLTLDYEEQKLYWADAK-----LNFIHKSNLDGTNRQAVVKGS-LPHPFALTLFEDILYW 223 (318)
T ss_dssp ETTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSC-CSCEEEEEEETTEEEE
T ss_pred EcCCCCeEEEEECCC-CCccEEEEeccCCEEEEEECC-----CCEEEEEcCCCCceEEEecCC-CCCceEEEEeCCEEEE
Confidence 987543333211111 112344443 6899998642 468999998754433332211 1122456667889998
Q ss_pred EeCCCCCCCCCeEEEEeCCCCc
Q psy10286 702 IGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 702 ~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
.-- ....|.++|+.+++
T Consensus 224 td~-----~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 224 TDW-----STHSILACNKYTGE 240 (318)
T ss_dssp EET-----TTTEEEEEETTTCC
T ss_pred Eec-----CCCeEEEEECCCCC
Confidence 832 22467888875543
No 358
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=78.99 E-value=32 Score=35.69 Aligned_cols=149 Identities=13% Similarity=0.199 Sum_probs=73.9
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCC--eEEEccCCC----CCCcceEEEEE--CC-EEEEEccCCCCcccCeEEEEEC
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKD--QWRIVKSMQ----KHRSAGGVIAF--DS-YVYALGGHDGLSIFDSVERYDP 625 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~----~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~ 625 (748)
++++++.| .+ ..+..||..+. .+..+...+ ........+.+ ++ .+++.|+.++ .+..||.
T Consensus 188 ~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd~ 256 (447)
T 3dw8_B 188 DYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG-----TIRLCDM 256 (447)
T ss_dssp TSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEe-CC-----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC-----eEEEEEC
Confidence 56666665 33 46888888732 233221111 11111222222 34 6788887754 5888998
Q ss_pred CCCcE-----EEccCCCCC--C-------cceeEEEE--CCEEEEEeccCCCccccEEEEEeCCC-CcE-EEccCCCCCC
Q psy10286 626 KTDEW-----TSVKPMLTK--R-------CRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPIT-DEW-KMIASMNVMR 687 (748)
Q Consensus 626 ~~~~W-----~~~~~~p~~--r-------~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W-~~~~~~p~~r 687 (748)
.+.+. ..+.....+ + .....+.+ +++.++.|+. ..+.+||..+ .+- ..+......+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~------~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY------LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES------SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC------CeEEEEeCCCCccccceeecccccc
Confidence 87653 222111100 0 02223333 5666666653 5788999875 321 1111100000
Q ss_pred c-------------ceEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 688 S-------------RVALVA-NMGKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 688 ~-------------~~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
. ...++. -+++.++.|+.+ ..|.+||..++.-.
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----g~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----NFFRMFDRNTKRDI 377 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----TEEEEEETTTCCEE
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccC-----CEEEEEEcCCCcce
Confidence 0 011233 356666777754 36899999887654
No 359
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=78.73 E-value=63 Score=33.22 Aligned_cols=100 Identities=15% Similarity=-0.015 Sum_probs=55.6
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCC----CCCCCeEEEEECCCCeEEEccCCCC------
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNG----SERLSTVEEFDPVRRVWNKVSPMCF------ 544 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~----~~~~~~v~~yd~~t~~W~~~~~~~~------ 544 (748)
+.+..+|+.+++-. ...+....-+ +++- +..+|+...... +...+.+.++|+.+.+-...-+++.
T Consensus 59 ~~V~ViD~~t~~v~--~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 59 TQQFVIDGEAGRVI--GMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp EEEEEEETTTTEEE--EEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CEEEEEECCCCeEE--EEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 68999999887642 2222222223 3333 456888753210 0123579999999987433212221
Q ss_pred CcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeE
Q psy10286 545 KRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQW 583 (748)
Q Consensus 545 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 583 (748)
...-+.++.. +.++|+.... ..+.+.+.|..+++=
T Consensus 136 g~~P~~~a~spDGk~lyVan~~----~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 136 GTYPWMTSLTPDGKTLLFYQFS----PAPAVGVVDLEGKAF 172 (386)
T ss_dssp SCCGGGEEECTTSSEEEEEECS----SSCEEEEEETTTTEE
T ss_pred CCCCceEEEcCCCCEEEEEEcC----CCCeEEEEECCCCcE
Confidence 1122333333 4578887431 136899999988864
No 360
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=78.65 E-value=37 Score=34.06 Aligned_cols=167 Identities=14% Similarity=0.127 Sum_probs=84.4
Q ss_pred cceEEEEeCC---CC--ceEE-ccCCCcc-------cce--eEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCe---E
Q psy10286 476 LSTVEVFDPL---VG--RWQM-AEAMSML-------RSR--VGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRV---W 536 (748)
Q Consensus 476 ~~~~~~yd~~---~~--~W~~-~~~~~~~-------r~~--~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~---W 536 (748)
.+.+.+||+. ++ .|.. ++..... +.+ -.+++- +|.+||.|... ...+++++|.... |
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~----~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG----MPAIARVSADGKTVSTF 174 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES----SCEEEEECTTSCCEEEE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC----CCeEEEEeCCCCEEeee
Confidence 3668999987 44 3532 2211111 222 223332 78999976532 1469999998542 6
Q ss_pred EEccCCCCCccee-EEEEE-CC-EEEEEeCCCCCCCCceEEEEeCCCCeEEEccC----CCCCCcce---EEEEECCEEE
Q psy10286 537 NKVSPMCFKRSAV-GAAAL-ND-KLYVCGGYDGVSSLNTVECYEPDKDQWRIVKS----MQKHRSAG---GVIAFDSYVY 606 (748)
Q Consensus 537 ~~~~~~~~~r~~~-~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~----~~~~r~~~---~~~~~~~~iy 606 (748)
-.-.+....+.+. +++.. +| .+++..+ . ..++.||..+-....++. ....-... ....++|++.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~-----g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vl 248 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGG-P-----RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESV 248 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESS-S-----SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEE
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcC-C-----CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEE
Confidence 5433333334333 55555 45 5666544 2 468899987432201110 00000111 1233688885
Q ss_pred EEccCCCCcccCeEEEEECCCCcEEEcc---CCCC---CCcceeEEE----ECCEEEEEecc
Q psy10286 607 ALGGHDGLSIFDSVERYDPKTDEWTSVK---PMLT---KRCRLGVAA----LNNKIYVCGGY 658 (748)
Q Consensus 607 v~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~---~r~~~~~~~----~~~~i~v~GG~ 658 (748)
+++-. .+..+.+-...+ |.... ..|. ++....+++ .+++||++.++
T Consensus 249 lV~~~-----~~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 249 LVGAR-----APYAISFRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EEEEE-----TTEEEEEECSST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECC
T ss_pred EEEcC-----CCCEEEEECCCC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeee
Confidence 55432 134455544444 87653 1121 344444444 57899999874
No 361
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=77.61 E-value=64 Score=36.15 Aligned_cols=116 Identities=11% Similarity=-0.039 Sum_probs=55.1
Q ss_pred CCEEEEEccCCCCcccCeEEEEE----CCCCcEEEccC----CCCCCcc-----eeEEEECCE-EEEE-eccCCCccccE
Q psy10286 602 DSYVYALGGHDGLSIFDSVERYD----PKTDEWTSVKP----MLTKRCR-----LGVAALNNK-IYVC-GGYDGAIFLQS 666 (748)
Q Consensus 602 ~~~iyv~GG~~~~~~~~~~~~yd----~~~~~W~~~~~----~p~~r~~-----~~~~~~~~~-i~v~-GG~~~~~~~~~ 666 (748)
++++++.....+ .....++.+| +.+.++..+.. ....... .-...-+++ +++. ...++ ...
T Consensus 263 D~~~~~~~~~~~-~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g---~~~ 338 (719)
T 1z68_A 263 DERVCLQWLKRV-QNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG---YKH 338 (719)
T ss_dssp SSEEEEEEEESS-TTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS---CEE
T ss_pred CCeEEEEEeccc-cCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC---ceE
Confidence 667666532211 1234789999 77766554431 1111111 112222444 5543 32322 467
Q ss_pred EEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCC-CCCCCCeEEEEeCCCC
Q psy10286 667 VEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYD-GVSNLPTVEVYDPSTD 722 (748)
Q Consensus 667 v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~-~~~~~~~v~~yd~~~~ 722 (748)
++.+|..+.+...+..-.......... -+++||+.+... .......+|..+..++
T Consensus 339 l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 339 IHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp EEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred EEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 999999888766664322211111222 345566555320 1122345677776544
No 362
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=76.51 E-value=94 Score=34.04 Aligned_cols=188 Identities=14% Similarity=0.067 Sum_probs=99.9
Q ss_pred EEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCC-CcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc
Q psy10286 510 RLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCF-KRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK 587 (748)
Q Consensus 510 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~-~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 587 (748)
..++.||.+ ..+..||..+.+... .+.. ...-.+++.. ++++++.||.+ ..+..||..+++....-
T Consensus 161 ~~l~s~s~D-----~~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D-----~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 161 FRIISGSDD-----NTVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGD-----GTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp CEEEEEETT-----SCEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEC
T ss_pred eEEEEEeCC-----CeEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECC-----CcEEEEECCCCcEeeee
Confidence 356777754 357788876654432 1221 1111222222 67888888865 46788888776543321
Q ss_pred -CC-----CCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCC-CCcceeEEEECCEEEEEeccC
Q psy10286 588 -SM-----QKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLT-KRCRLGVAALNNKIYVCGGYD 659 (748)
Q Consensus 588 -~~-----~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~ 659 (748)
.. .....-.+++.. ++..++.||.+ ..+..+|..+.+....-.... .......+..++..++.++.+
T Consensus 229 ~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 229 EDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp BCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred ccccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 11 011111122222 67777777764 368889998877654322111 111222334466666666654
Q ss_pred CCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCCceEe
Q psy10286 660 GAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (748)
+ .+..+|+.+..-... +........++.. +++.++.||.++ .+.++|..++....
T Consensus 304 ~-----~i~~~~~~~~~~~~~--~~gh~~~v~~l~~spdg~~l~s~s~D~-----~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 304 G-----FINFVNPELGSIDQV--RYGHNKAITALSSSADGKTLFSADAEG-----HINSWDISTGISNR 360 (611)
T ss_dssp C-----CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEE
T ss_pred C-----cEEEEeCCCCCcceE--EcCCCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEECCCCceee
Confidence 3 567788877653221 1111112222222 677777777553 58899988876544
No 363
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=75.58 E-value=71 Score=32.16 Aligned_cols=205 Identities=12% Similarity=-0.031 Sum_probs=88.8
Q ss_pred CeEEEEECCC-CeEEE-ccCC--CCCcceeEEEEE-CC-EEEEEeCCCCCCCCceEEEEeCC-CCeEEEccCC--CCCCc
Q psy10286 524 STVEEFDPVR-RVWNK-VSPM--CFKRSAVGAAAL-ND-KLYVCGGYDGVSSLNTVECYEPD-KDQWRIVKSM--QKHRS 594 (748)
Q Consensus 524 ~~v~~yd~~t-~~W~~-~~~~--~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~--~~~r~ 594 (748)
..+..|+... .+... +... ......++++.. +| .+|+... . .+.+..||.. +++...+... +..-.
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~-~----~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL-T----ANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-T----TTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC-C----CCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 3566777653 33321 1111 112233444443 55 4665431 1 2578899987 6766544322 21011
Q ss_pred ce-EEEEE-CC-EEEEEccCCCCcccCeEEEEECCCCcEE----EccCCCCCC---c-------ceeEEE-E--CC-EEE
Q psy10286 595 AG-GVIAF-DS-YVYALGGHDGLSIFDSVERYDPKTDEWT----SVKPMLTKR---C-------RLGVAA-L--NN-KIY 653 (748)
Q Consensus 595 ~~-~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~----~~~~~p~~r---~-------~~~~~~-~--~~-~i~ 653 (748)
.. .++.. +| .+|+.+..++ .-.++.+|+.+++.. .+..+|..- . ....+. + ++ .||
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~---~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGN---RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTT---EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred CCCEeEECCCCCEEEEEECCCC---eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 11 22222 44 6777653321 113444555566543 344444321 1 222333 3 44 566
Q ss_pred EEeccCCCccccEEEEEeCC-CCcEEEc----cCCCCCCcceEEEE---ECCEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 654 VCGGYDGAIFLQSVEMYDPI-TDEWKMI----ASMNVMRSRVALVA---NMGKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~-~~~W~~~----~~~p~~r~~~~~~~---~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
+.....+......+.+|+.. +.+...+ +.....-.+.+... -++.||+.+.. .+.+.+|+...+.-+
T Consensus 271 v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~-----~~~v~v~~~~~~~l~ 345 (365)
T 1jof_A 271 ASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ-----EGWLEIYRWKDEFLH 345 (365)
T ss_dssp EEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS-----SCEEEEEEEETTEEE
T ss_pred EECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcC-----CCeEEEEEEchhhCc
Confidence 54321111112378888874 5555542 11111111222223 24556655432 246777776655443
Q ss_pred ecC--CCCCCCcceEEEE
Q psy10286 726 FVA--PMCAHEGGVGVGV 741 (748)
Q Consensus 726 ~~~--~~~~~r~~~~~~~ 741 (748)
.+. ++|.+-+-..|+-
T Consensus 346 ~~~~~~~~~p~~~~~~~~ 363 (365)
T 1jof_A 346 RVARVRIPEPGFGMNAIW 363 (365)
T ss_dssp EEEEEECCSTTEEEEEEE
T ss_pred eeeEEEcCCCcceeeeEe
Confidence 332 2444444444443
No 364
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=75.57 E-value=70 Score=32.09 Aligned_cols=62 Identities=10% Similarity=0.140 Sum_probs=35.9
Q ss_pred CCEEEEEccCCCCcccCe-EEEEECCCCcEEEccCCCC--CCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCC
Q psy10286 602 DSYVYALGGHDGLSIFDS-VERYDPKTDEWTSVKPMLT--KRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITD 675 (748)
Q Consensus 602 ~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 675 (748)
++.+++.|+.++ . +..+|..+.+-... +.. .......+.+ +++.++.|+.+ ..+.+||....
T Consensus 206 ~g~~l~s~s~d~-----~~v~iwd~~~~~~~~~--~~~g~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDG-----TIIRVFKTEDGVLVRE--FRRGLDRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTC-----SEEEEEETTTCCEEEE--EECTTCCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CCCEEEEEeCCC-----CEEEEEECCCCcEEEE--EEcCCCCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 677778887643 4 88899887653321 110 1111222222 67778888754 46788887543
No 365
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=73.85 E-value=77 Score=31.77 Aligned_cols=64 Identities=13% Similarity=0.080 Sum_probs=36.7
Q ss_pred CCEEEEEeccCCCccccE-EEEEeCCCCcEEE-ccCCCCCCcceEEEE-ECCEEEEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 649 NNKIYVCGGYDGAIFLQS-VEMYDPITDEWKM-IASMNVMRSRVALVA-NMGKLWAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 649 ~~~i~v~GG~~~~~~~~~-v~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
++++++.|+.++ . +.+||..+.+-.. +..-.....-.+++. -+++.++.|+.+ ..+.+||..+.
T Consensus 206 ~g~~l~s~s~d~-----~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDG-----TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTC-----SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CCCEEEEEeCCC-----CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 677888887653 4 8889988764332 210001111122222 267788888754 46888887654
No 366
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=72.50 E-value=92 Score=32.08 Aligned_cols=213 Identities=9% Similarity=-0.013 Sum_probs=109.8
Q ss_pred ceEeecCCCCceeecccc-cccceEE-e-cccccccCCCccceEEEEeCCCC----ceEEccCCCcccceeEEEEE--CC
Q psy10286 439 TVEVFDPLVGRWQMAEEE-TLSNAVI-S-TKSCLTKAGDSLSTVEVFDPLVG----RWQMAEAMSMLRSRVGVAVM--KN 509 (748)
Q Consensus 439 ~~~~y~~~~~~W~~~~~~-~~~~~~~-~-~~~~~~~~g~~~~~~~~yd~~~~----~W~~~~~~~~~r~~~~~~~~--~~ 509 (748)
.+...+.....+..+... ....++. . ..+.+|........++++++... ....+..- ....-.++++. ++
T Consensus 93 ~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~p~glavD~~~~ 171 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHS 171 (400)
T ss_dssp EEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS-SCSCEEEEEEETTTT
T ss_pred eeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC-CCCCcccEEEEecCC
Confidence 355555555555443321 1111221 1 23445544444456777777642 12222111 11122344443 78
Q ss_pred EEEEEccCCCCCCCCeEEEEECCCCeEEEcc--CCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEE
Q psy10286 510 RLYAFGGYNGSERLSTVEEFDPVRRVWNKVS--PMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRI 585 (748)
Q Consensus 510 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 585 (748)
.||+.-.. ...++++|+....-..+. .+..| .+.++. ++.||+.-.. ....++++++....=+.
T Consensus 172 ~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~----~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 172 NIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp EEEEEETT-----TTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECS----SSCCEEEEETTSCSCEE
T ss_pred ceEEEECC-----CCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCC----CCCEEEEEeCCCCccEE
Confidence 99998542 357889998876544432 22223 244443 6899987421 12468888887543222
Q ss_pred ccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCC-CCCCcceeEEEECCEEEEEeccCCCc
Q psy10286 586 VKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPM-LTKRCRLGVAALNNKIYVCGGYDGAI 662 (748)
Q Consensus 586 ~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~ 662 (748)
+..-.. ..-.++++- +++||+.-.. .+.|+++|.....-..+... ..-....++++.++.||+..-.
T Consensus 240 ~~~~~l-~~P~glavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~---- 309 (400)
T 3p5b_L 240 LVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII---- 309 (400)
T ss_dssp EECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESS----
T ss_pred EEECCC-CceEEEEEEeCCCEEEEEECC-----CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCC----
Confidence 211110 111234443 7899998543 46899999875443333221 1122335777789999998732
Q ss_pred cccEEEEEeCCCC
Q psy10286 663 FLQSVEMYDPITD 675 (748)
Q Consensus 663 ~~~~v~~yd~~~~ 675 (748)
.+.|+++|..+.
T Consensus 310 -~~~V~~~~~~~G 321 (400)
T 3p5b_L 310 -NEAIFSANRLTG 321 (400)
T ss_dssp -SCSEEEEESSSC
T ss_pred -CCeEEEEEcCCC
Confidence 256888885443
No 367
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=72.06 E-value=18 Score=39.86 Aligned_cols=143 Identities=14% Similarity=0.155 Sum_probs=78.1
Q ss_pred EEEEECCEEEEEccCCCCCCCCeEEEEECCCC-eEE--Ec----cCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceE
Q psy10286 503 GVAVMKNRLYAFGGYNGSERLSTVEEFDPVRR-VWN--KV----SPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTV 573 (748)
Q Consensus 503 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~-~W~--~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 573 (748)
+++..++.+|+|=| +.+|+++.... ... .+ +.+|... . ++... ++++|+|-| +..
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~~I-D-AA~~~~~~~k~yFFkG-------~~y 511 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEKI-D-AVYEAPQEEKAVFFAG-------NEY 511 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCSSC-S-BCCEETTTTEEEEEET-------TEE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCccc-e-EEEEECCCCEEEEEec-------CEE
Confidence 45556889999977 46888876552 221 12 2233221 1 22222 678999987 578
Q ss_pred EEEeCCCC--eE-EEccC--CCCC--CcceEEEE--ECCEEEEEccCCCCcccCeEEEEECCCCcEE-----Ecc-CC-C
Q psy10286 574 ECYEPDKD--QW-RIVKS--MQKH--RSAGGVIA--FDSYVYALGGHDGLSIFDSVERYDPKTDEWT-----SVK-PM-L 637 (748)
Q Consensus 574 ~~yd~~~~--~W-~~~~~--~~~~--r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-----~~~-~~-p 637 (748)
|+|+..+- .+ +.+.. +|.. +.. ++.. .++++|+|-|. ..|+||..+++-. .+. .. .
T Consensus 512 Wry~~~~l~~GYPk~Is~~G~P~~~~~ID-AAf~~~~~gktYFFkG~-------~ywryd~~~~~vd~gYPk~i~~~w~G 583 (631)
T 1ck7_A 512 WIYSASTLERGYPKPLTSLGLPPDVQRVD-AAFNWSKNKKTYIFAGD-------KFWRYNEVKKKMDPGFPKLIADAWNA 583 (631)
T ss_dssp EEEETTEECTTCCEEGGGGTCCTTCCCCC-BCCCCTTTCEEEEEETT-------EEEEEETTTTEECTTCCEETTTSCSS
T ss_pred EEECCCccccCCCccchhcCCCCCCCcce-eEEEecCCCeEEEEECC-------EEEEEcCCcccccCCCCcchHhhcCC
Confidence 89985210 00 11211 1211 111 2222 36899999884 7999998765321 111 11 1
Q ss_pred CCCcceeEEEEC--CEEEEEeccCCCccccEEEEEeCCCCc
Q psy10286 638 TKRCRLGVAALN--NKIYVCGGYDGAIFLQSVEMYDPITDE 676 (748)
Q Consensus 638 ~~r~~~~~~~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~~ 676 (748)
.+..--++...+ +++|++-| +..|+||..+..
T Consensus 584 ~p~~iDAAf~~~~~g~~YFFkG-------~~Ywr~d~~~~~ 617 (631)
T 1ck7_A 584 IPDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 617 (631)
T ss_dssp CCTTCCEEECCTTSCBCEEEET-------TEEECCBTTBTT
T ss_pred CCCCCcEeEEEcCCCeEEEEEC-------CEEEEEeCccce
Confidence 122223344433 78999987 567888876543
No 368
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=71.48 E-value=1.2e+02 Score=34.47 Aligned_cols=184 Identities=11% Similarity=-0.021 Sum_probs=88.3
Q ss_pred CeEEEEECCCC-eEEEccCCCCCcceeEEEEE-CC-EEEEEeCCCCCCCCceEEEEeCCCCeE--EEccCCCCCCcceEE
Q psy10286 524 STVEEFDPVRR-VWNKVSPMCFKRSAVGAAAL-ND-KLYVCGGYDGVSSLNTVECYEPDKDQW--RIVKSMQKHRSAGGV 598 (748)
Q Consensus 524 ~~v~~yd~~t~-~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~~~~r~~~~~ 598 (748)
..++++|..++ +. ++. .......+.+.. +| .|+... .+.......++.++..+..- ..+-.-+...+....
T Consensus 201 ~~l~v~dl~~g~~~--l~~-~~~~~~~~~~WspDg~~l~y~~-~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 276 (751)
T 2xe4_A 201 YTIEFKRISDPSQT--IAD-KVSGTNGEIVWGPDHTSLFYVT-KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFM 276 (751)
T ss_dssp EEEEEEETTCTTCC--CCC-CEEEECSCCEECSSTTEEEEEE-ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEE
T ss_pred EEEEEEECCCCCEe--CCc-cccCceeeEEEecCCCEEEEEE-ECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEE
Confidence 46889998887 52 111 001111112221 44 444332 22112224677777766421 111011222222222
Q ss_pred EEE-CC-EEEEEccCCCCcccCeEEEEECCCC--cE--EEccCCCCCCcceeEE-EECCEEEEEeccCCCccccEEEEEe
Q psy10286 599 IAF-DS-YVYALGGHDGLSIFDSVERYDPKTD--EW--TSVKPMLTKRCRLGVA-ALNNKIYVCGGYDGAIFLQSVEMYD 671 (748)
Q Consensus 599 ~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~--~W--~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd 671 (748)
... ++ .|++..... ..+.++.+|..+. .+ ..+.+-.. ...++.. ..++.+|+....++ .....++.+|
T Consensus 277 ~~SpDg~~l~~~~~~~---~~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~~-a~~~~L~~~d 351 (751)
T 2xe4_A 277 YKAADTNTLCIGSQSP---ETAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEGG-AVNHKLLIAP 351 (751)
T ss_dssp EECTTSSEEEEEEECS---SCEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTTT-CTTCEEEEEE
T ss_pred EECCCCCEEEEEecCC---CCceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCCC-CCCcEEEEEc
Confidence 222 44 455544322 2468999998875 46 55533211 1112222 23788888875441 1235899999
Q ss_pred CCC-CcEEE-ccCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeC
Q psy10286 672 PIT-DEWKM-IASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDP 719 (748)
Q Consensus 672 ~~~-~~W~~-~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~ 719 (748)
..+ ..|+. +-.......-......++.|++....++ ...++++|+
T Consensus 352 ~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g---~~~l~~~dl 398 (751)
T 2xe4_A 352 RGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG---LTRIWTMMA 398 (751)
T ss_dssp TTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT---EEEEEEEEC
T ss_pred CCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC---EEEEEEEec
Confidence 876 67876 4221111122233445777777765433 246888886
No 369
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=71.05 E-value=1.8 Score=34.94 Aligned_cols=36 Identities=14% Similarity=0.308 Sum_probs=29.2
Q ss_pred hhhhHHHHHHHhhc-----c---eeEE---EecccHHHHHHHhhhcC
Q psy10286 218 FSCRAMEALINFAY-----S---GRVT---IHSQNVQSLMVVASFLQ 253 (748)
Q Consensus 218 ~~~~~~~~ll~~~y-----~---~~~~---~~~~~~~~l~~~a~~~~ 253 (748)
.+...++.+++|+| + +.+. +..+++.+|+.+|++|+
T Consensus 50 V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 50 IPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLD 96 (97)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCGGGHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCHHHHHHHHHHHhhhC
Confidence 45677888999999 4 5565 78899999999999886
No 370
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=70.74 E-value=1.5e+02 Score=33.79 Aligned_cols=145 Identities=9% Similarity=0.031 Sum_probs=84.3
Q ss_pred ECCEEEEEccCCCCCCCCeEEEEECCCCeEEEcc--CCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCe
Q psy10286 507 MKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVS--PMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQ 582 (748)
Q Consensus 507 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 582 (748)
.++.||+.-. ....|+++++....-+.+. .+..| .++++- ++.||+.-- .....++++++....
T Consensus 481 ~~~~LY~tD~-----~~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~----g~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 481 IHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDW----GTPAKIKKGGLNGVD 548 (791)
T ss_dssp TTTEEEEEET-----TTTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEEC----SSSCEEEEEETTSCC
T ss_pred cCCcEEEEec-----CCCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEEecC----CCCCeEEEEecCCCc
Confidence 3779999754 2357999998876554442 23333 244443 689998741 112578899887655
Q ss_pred EEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEcc-CCCCCCcceeEEEECCEEEEEeccC
Q psy10286 583 WRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVK-PMLTKRCRLGVAALNNKIYVCGGYD 659 (748)
Q Consensus 583 W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~ 659 (748)
-..+..-.. ..-.++++- +++||+.-.. .+.|+++|+....-..+. ....-....++++.+++||+.-..
T Consensus 549 ~~~lv~~~l-~~P~GLavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~- 621 (791)
T 3m0c_C 549 IYSLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII- 621 (791)
T ss_dssp EEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT-
T ss_pred eEEEEeCCC-CCceEEEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECC-
Confidence 444322111 111234433 7899998543 467999998755433332 211112335677789999998743
Q ss_pred CCccccEEEEEeCCC
Q psy10286 660 GAIFLQSVEMYDPIT 674 (748)
Q Consensus 660 ~~~~~~~v~~yd~~~ 674 (748)
.+.|+.+|..+
T Consensus 622 ----~~~I~~~dk~t 632 (791)
T 3m0c_C 622 ----NEAIFSANRLT 632 (791)
T ss_dssp ----TTEEEEEETTT
T ss_pred ----CCEEEEEeCCC
Confidence 35666666433
No 371
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=68.14 E-value=81 Score=34.40 Aligned_cols=208 Identities=11% Similarity=0.127 Sum_probs=115.0
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE----CCEEEEEeCCC------C------CCCCc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL----NDKLYVCGGYD------G------VSSLN 571 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~----~~~iyv~GG~~------~------~~~~~ 571 (748)
+.++||--. ....+.+.|+.+.+-..+-.+|....-|+.+.. ++++|+-+... + ....+
T Consensus 101 G~~lfVnd~-----~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 101 GRFLFMNDK-----ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEET-----TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCEEEEEcC-----CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 457888432 346799999999886665567777777887763 56888775331 1 12335
Q ss_pred eEEEEeCCCCe--EEEccCCCCCCcceEEEEE-CCEEEEEccCC-------------------------------C-Ccc
Q psy10286 572 TVECYEPDKDQ--WRIVKSMQKHRSAGGVIAF-DSYVYALGGHD-------------------------------G-LSI 616 (748)
Q Consensus 572 ~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~-------------------------------~-~~~ 616 (748)
.+-+.|..+.+ |+..-+- .-.+..+.. ++.+|+.--.+ | ...
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg---~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSG---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEETTTTEEEEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred eEEEEECCCCeEEEEEEeCC---CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 77888988765 5543211 111122222 22333332111 0 112
Q ss_pred cCeEEEEECCCCcEEE-ccCCCCCCcceeEEEE-CC-EEEEEeccCCCccccEEEEEeCCCCc-E---------EEccCC
Q psy10286 617 FDSVERYDPKTDEWTS-VKPMLTKRCRLGVAAL-NN-KIYVCGGYDGAIFLQSVEMYDPITDE-W---------KMIASM 683 (748)
Q Consensus 617 ~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~-W---------~~~~~~ 683 (748)
.+.+-+.|+.+.+.+. +...|.+..-|++..- +| .+|+.|+. .+.+.+||..+.+ + ..+...
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~-----s~~VsVid~~~~~~~~~~~l~~~~~v~~~v 327 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL-----SPTVTVLDVTRFDAVFYENADPRSAVVAEP 327 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT-----SSBEEEEEGGGHHHHHHSCCCGGGGEEECC
T ss_pred ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC-----CCeEEEEECcccccccccccCcccceEEEc
Confidence 3568888888743322 2344555566777666 44 56666643 4789999988642 1 012223
Q ss_pred CCC-CcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCC--------CceEecCCCCCC
Q psy10286 684 NVM-RSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPST--------DSWAFVAPMCAH 733 (748)
Q Consensus 684 p~~-r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~--------~~W~~~~~~~~~ 733 (748)
+.+ +-.|.+..-+|.+|+.-..+ ++|.+||.++ +.+..+..++..
T Consensus 328 ~vG~gP~h~aF~~dG~aY~t~~ld-----sqV~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 328 ELGLGPLHTAFDGRGNAYTSLFLD-----SQVVKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp BCCSCEEEEEECTTSEEEEEETTT-----TEEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred CCCCCcceEEECCCCeEEEEEecC-----CcEEEEEhhHhhhhhcccccceeEEEeecc
Confidence 322 33455544467888875533 4677777665 235555555443
No 372
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=67.81 E-value=1.6e+02 Score=33.03 Aligned_cols=244 Identities=10% Similarity=0.039 Sum_probs=123.5
Q ss_pred CCccceEEEEeCCCCceEEccCCCcccc------eeEE-EEE-CCEEEEEcc-----CCCCCCCCeEEEEECCCCe--EE
Q psy10286 473 GDSLSTVEVFDPLVGRWQMAEAMSMLRS------RVGV-AVM-KNRLYAFGG-----YNGSERLSTVEEFDPVRRV--WN 537 (748)
Q Consensus 473 g~~~~~~~~yd~~~~~W~~~~~~~~~r~------~~~~-~~~-~~~iyv~GG-----~~~~~~~~~v~~yd~~t~~--W~ 537 (748)
|.-...+..||..++++..-+--|.... -++. +-. ++.+|+.-- .+.......+++....|.. =.
T Consensus 152 G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~ 231 (711)
T 4hvt_A 152 GKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAK 231 (711)
T ss_dssp TCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCE
T ss_pred CCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCe
Confidence 4455678889999998853211122211 2233 334 566776421 1223334567766655542 01
Q ss_pred EccCCCCCcceeEEEEE-CCE-----EEEEeCCCCCCCCceEEEEeCCC--CeEEEccCCCCCCcceEEEEECCEEEEEc
Q psy10286 538 KVSPMCFKRSAVGAAAL-NDK-----LYVCGGYDGVSSLNTVECYEPDK--DQWRIVKSMQKHRSAGGVIAFDSYVYALG 609 (748)
Q Consensus 538 ~~~~~~~~r~~~~~~~~-~~~-----iyv~GG~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~r~~~~~~~~~~~iyv~G 609 (748)
.+-.-+......++... +++ +++..+.+ ...+.++..|... ..|..+ .+ |+...-....++.+|+..
T Consensus 232 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~l-~~--~~~~~~~~~~~~~~~~~~ 306 (711)
T 4hvt_A 232 KLFEVPKEYIYVSAGKLLSDTISSSLIFISANKD--FYNYDNYILDTKYKNLKLQKI-NM--PSDATLQGSFKEYVFWLL 306 (711)
T ss_dssp EEEECCTTSCEEEEEESSCTTTCSSEEEEEEESS--SSCEEEEEEECSSSSCEEEEC-CS--CTTCEEEEEETTEEEEEC
T ss_pred EEeccCCCceEEEEEEecCCCceEEEEEEEEecc--cCceeEEEEcCCCCCCcceEe-ec--CCcceEeeeECCEEEEEE
Confidence 11001112222233222 222 44433222 2236777777653 667777 23 332222456799999987
Q ss_pred cCCCC-----cccCeEEEEECCC--------CcEEE-ccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCC
Q psy10286 610 GHDGL-----SIFDSVERYDPKT--------DEWTS-VKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITD 675 (748)
Q Consensus 610 G~~~~-----~~~~~~~~yd~~~--------~~W~~-~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 675 (748)
..+.. .....+...|..+ ..|+. +.+- ..+.--+....++.+++..-.++ ...++++|+.++
T Consensus 307 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~g 382 (711)
T 4hvt_A 307 RSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT-ANEVFNFISTTKDRVFLATYDNV---VAKVVTFTLENE 382 (711)
T ss_dssp SSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC-TTEEEEEEEECSSCEEEEEEETT---EEEEEEECEETT
T ss_pred CcccccccccCCCCeEEEEECCcccccccccccceEEECCC-CCCeEEEEEEECCEEEEEEEECC---EEEEEEEECCCC
Confidence 54311 1345688888654 46887 3322 22333344555777777654333 357889998888
Q ss_pred cEEEc--cCCCCCCcceEEEEE---CCEEEEE-eCCCCCCCCCeEEEEeCCCCceEecCCC
Q psy10286 676 EWKMI--ASMNVMRSRVALVAN---MGKLWAI-GGYDGVSNLPTVEVYDPSTDSWAFVAPM 730 (748)
Q Consensus 676 ~W~~~--~~~p~~r~~~~~~~~---~~~l~v~-GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 730 (748)
.|... -.+|.. ........ ++.+++. .+.. .-.+++.||+. ++++.+...
T Consensus 383 ~~~~~~~i~lp~~-~~~~~~~~~~~~~~~~~~~ss~~---~P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 383 QWTKPVVLKLPYQ-NAIFGMSSYEEEEEALITIENSI---VPPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp EECCCEEECCCST-TCEEEEECCTTCSCEEEEEECSS---SCCEEEEECTT-SCEEEEECC
T ss_pred ceEEEeccCCCCC-eEEEEEeecCcCCEEEEEEecCC---CCCEEEEEeCC-CcEEEEecC
Confidence 88432 223322 12222222 3344443 3332 23578999987 777765443
No 373
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=66.41 E-value=1.3e+02 Score=31.52 Aligned_cols=163 Identities=11% Similarity=-0.037 Sum_probs=75.7
Q ss_pred ccccCCCccceEEEEeCCCC----ceEEcc---CC----CcccceeEEEEECCEEEEEc-cCCCCCCCCeEEEEECCCCe
Q psy10286 468 CLTKAGDSLSTVEVFDPLVG----RWQMAE---AM----SMLRSRVGVAVMKNRLYAFG-GYNGSERLSTVEEFDPVRRV 535 (748)
Q Consensus 468 ~~~~~g~~~~~~~~yd~~~~----~W~~~~---~~----~~~r~~~~~~~~~~~iyv~G-G~~~~~~~~~v~~yd~~t~~ 535 (748)
.++..|...+.++.+|..++ +-.+.- .+ ...+-++..+.-++ |||.. |...+.....+..+|..|.+
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe
Confidence 34445566688999998766 322221 01 11122222333366 77742 21122345789999999875
Q ss_pred EEEc-c--CCCCCcceeEEE-EECCEEEEEeC----------CCCC----CCCceEEEEeCCCCeEEEccCCCCCCcc--
Q psy10286 536 WNKV-S--PMCFKRSAVGAA-ALNDKLYVCGG----------YDGV----SSLNTVECYEPDKDQWRIVKSMQKHRSA-- 595 (748)
Q Consensus 536 W~~~-~--~~~~~r~~~~~~-~~~~~iyv~GG----------~~~~----~~~~~~~~yd~~~~~W~~~~~~~~~r~~-- 595 (748)
=... + ..+... .+... .-++++++.-- +... ...+.+..||..+.+ .+..++.+..+
T Consensus 176 v~~~~~~~~~~~~~-~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~vg~~g~~ 252 (462)
T 2ece_A 176 PLGKWEIDRGDQYL-AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTLGEENRM 252 (462)
T ss_dssp EEEECCSBCTTCCC-CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEESCTTEEE
T ss_pred EEEEEccCCCCccc-cceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEecCCCCCc
Confidence 3221 1 112111 11122 22444444432 2221 246899999998764 33323222111
Q ss_pred --eEEEEE---CCEEEEEccCCCCcccCeEEEEECCCCcEEEcc
Q psy10286 596 --GGVIAF---DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVK 634 (748)
Q Consensus 596 --~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 634 (748)
+-...+ +..+|+..-.+-....+.++.|....++|+...
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 111111 446777654111111345554444447776543
No 374
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=65.34 E-value=1.3e+02 Score=31.32 Aligned_cols=60 Identities=13% Similarity=0.188 Sum_probs=34.5
Q ss_pred CEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCC
Q psy10286 556 DKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKT 627 (748)
Q Consensus 556 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 627 (748)
+.+++.|+.+ ..+..||..+..-.. .... .......+.+ +++.++.|+.++ .+..||+..
T Consensus 162 ~~~las~s~D-----g~v~iwD~~~~~~~~-~~~~-~~~~v~~v~wspdg~~lasgs~dg-----~v~iwd~~~ 223 (434)
T 2oit_A 162 PSMVAVCLAD-----GSIAVLQVTETVKVC-ATLP-STVAVTSVCWSPKGKQLAVGKQNG-----TVVQYLPTL 223 (434)
T ss_dssp TTEEEEEETT-----SCEEEEEESSSEEEE-EEEC-GGGCEEEEEECTTSSCEEEEETTS-----CEEEECTTC
T ss_pred CCEEEEEECC-----CeEEEEEcCCCccee-eccC-CCCceeEEEEcCCCCEEEEEcCCC-----cEEEEccCC
Confidence 6778878765 357888887763211 1111 1112222222 567777777643 588899873
No 375
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=65.30 E-value=4.1 Score=37.55 Aligned_cols=48 Identities=13% Similarity=0.308 Sum_probs=38.9
Q ss_pred hhhHHHHHHHhhcceeEEEecc-cHHHHHHHhhhcCcHHHHHHHHHHHh
Q psy10286 219 SCRAMEALINFAYSGRVTIHSQ-NVQSLMVVASFLQMQKVADACADFLK 266 (748)
Q Consensus 219 ~~~~~~~ll~~~y~~~~~~~~~-~~~~l~~~a~~~~l~~l~~~c~~~l~ 266 (748)
+...|..+++|+.+|.+.+... ....++..|+||+|+.|.+.|.+.|.
T Consensus 63 DP~~F~~ILnyLRtG~L~lP~~~~~~~l~eEA~FygL~~Lv~~l~~~i~ 111 (202)
T 3drx_A 63 DPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIR 111 (202)
T ss_dssp CSTTHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHhcCCccCCCCCCCHHHHHHHHHHCCcHHHHHHHHHHHH
Confidence 4567888999999999876443 33678899999999999998887775
No 376
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=64.66 E-value=2.1e+02 Score=33.17 Aligned_cols=177 Identities=11% Similarity=0.001 Sum_probs=89.1
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE--
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-- 554 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-- 554 (748)
..+..||..+.+-... ++....-.+++...++..+.|+.+ ..+..+|..+.+-...-..+ ..-.++.+
T Consensus 39 g~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~~~~~~~~---~~V~~v~~sp 108 (902)
T 2oaj_A 39 GEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKVLTTVFVP---GKITSIDTDA 108 (902)
T ss_dssp SEEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSEEEEEECS---SCEEEEECCT
T ss_pred CEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcEEEEEcCC---CCEEEEEECC
Confidence 4677788765543222 111111223333345555555533 47888998876532211111 11222222
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc--------CCCCCC--cceEEEEEC--CEEEEEccCCCCcccCeEEE
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK--------SMQKHR--SAGGVIAFD--SYVYALGGHDGLSIFDSVER 622 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--------~~~~~r--~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~ 622 (748)
++...+.|+.+ ..+..||..+..-.... ..+... .-.+++... +.+++.|+.+ ..+ .
T Consensus 109 ~g~~l~sgs~d-----g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d-----g~v-l 177 (902)
T 2oaj_A 109 SLDWMLIGLQN-----GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY-----VTL-T 177 (902)
T ss_dssp TCSEEEEEETT-----SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS-----CEE-E
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC-----CcE-E
Confidence 56666677654 46788998887643110 001111 112333332 3566677654 357 8
Q ss_pred EECCCCcEEEccCCC------C---------C-CcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEE
Q psy10286 623 YDPKTDEWTSVKPML------T---------K-RCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKM 679 (748)
Q Consensus 623 yd~~~~~W~~~~~~p------~---------~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 679 (748)
+|..+.+-...-... . . ......+.+ ++..++.|+.++ .+.+||..+.+-..
T Consensus 178 Wd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg-----~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 178 YSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN-----SLVFWDANSGHMIM 247 (902)
T ss_dssp EETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC-----CEEEEETTTCCEEE
T ss_pred EECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC-----eEEEEECCCCcEEE
Confidence 998887643321110 0 0 011223333 677888887653 68899998876543
No 377
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=64.47 E-value=2.1e+02 Score=33.14 Aligned_cols=187 Identities=12% Similarity=-0.003 Sum_probs=94.3
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK 587 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 587 (748)
++.+.+.|+.+ ..+..||..+.+-... .+....-.+++...|+..+.|+.+ ..+..||..+.+-...-
T Consensus 28 dg~~lAsgs~D-----g~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 28 TQNLLAIATVT-----GEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp TTTEEEEEETT-----SEEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSEEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcEEEEE
Confidence 55666677654 3577777666543222 111112223333345555555543 57888998876532211
Q ss_pred CCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEcc--------CCCCCC--cceeEEEE--CCEEE
Q psy10286 588 SMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVK--------PMLTKR--CRLGVAAL--NNKIY 653 (748)
Q Consensus 588 ~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--------~~p~~r--~~~~~~~~--~~~i~ 653 (748)
. .+ ..-.++.+ ++...+.|+.++ .+..||..+.+-.... ..+... .-.+++.. ++.++
T Consensus 96 ~--~~-~~V~~v~~sp~g~~l~sgs~dg-----~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 96 F--VP-GKITSIDTDASLDWMLIGLQNG-----SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp E--CS-SCEEEEECCTTCSEEEEEETTS-----CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred c--CC-CCEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 1 11 11122222 556666676643 5888998877643110 001111 11222222 23567
Q ss_pred EEeccCCCccccEEEEEeCCCCcEEEc-c-CC----CC---------C-CcceEEEEE--CCEEEEEeCCCCCCCCCeEE
Q psy10286 654 VCGGYDGAIFLQSVEMYDPITDEWKMI-A-SM----NV---------M-RSRVALVAN--MGKLWAIGGYDGVSNLPTVE 715 (748)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~~----p~---------~-r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~ 715 (748)
++|+.+ ..+ .||..+.+-... . .. +. . ......+.. +++.++.|+.++ .+.
T Consensus 168 ~~g~~d-----g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg-----~i~ 236 (902)
T 2oaj_A 168 LISYEY-----VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN-----SLV 236 (902)
T ss_dssp EEECSS-----CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC-----CEE
T ss_pred EEEeCC-----CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC-----eEE
Confidence 777644 357 899988764332 1 10 00 0 111223333 678888887553 589
Q ss_pred EEeCCCCceE
Q psy10286 716 VYDPSTDSWA 725 (748)
Q Consensus 716 ~yd~~~~~W~ 725 (748)
+||..+++-.
T Consensus 237 lWd~~~g~~~ 246 (902)
T 2oaj_A 237 FWDANSGHMI 246 (902)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcEE
Confidence 9999887643
No 378
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=62.92 E-value=1.3e+02 Score=30.01 Aligned_cols=83 Identities=10% Similarity=0.113 Sum_probs=45.6
Q ss_pred eEEEEE-CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCC-----CCcceeEEEEE--CCEEEEEeCCCCCCCCceE
Q psy10286 502 VGVAVM-KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMC-----FKRSAVGAAAL--NDKLYVCGGYDGVSSLNTV 573 (748)
Q Consensus 502 ~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~-----~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 573 (748)
+++++. +++||+..-.........+.+||+.+++-...-.++ ....-..+++- ++.+|+.....+ ....+
T Consensus 70 ~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~--~~~~i 147 (343)
T 2qe8_A 70 LGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD--DKAAL 147 (343)
T ss_dssp EEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--GGCEE
T ss_pred eEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--CCCeE
Confidence 444443 578999752110011357999999988743321221 11122444554 578998743110 13578
Q ss_pred EEEeCCCCe-EEEc
Q psy10286 574 ECYEPDKDQ-WRIV 586 (748)
Q Consensus 574 ~~yd~~~~~-W~~~ 586 (748)
.+||+.+++ |+.+
T Consensus 148 ~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 148 IRVDLQTGLAARVL 161 (343)
T ss_dssp EEEETTTCCEEEEC
T ss_pred EEEECCCCCEEEEe
Confidence 999987654 6655
No 379
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=62.39 E-value=48 Score=36.55 Aligned_cols=145 Identities=14% Similarity=0.186 Sum_probs=76.1
Q ss_pred EEEEECCEEEEEeCCCCCCCCceEEEEeCCCC-eEE--Ec----cCCCCCCcceEEEE-ECCEEEEEccCCCCcccCeEE
Q psy10286 550 GAAALNDKLYVCGGYDGVSSLNTVECYEPDKD-QWR--IV----KSMQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVE 621 (748)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~--~~----~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 621 (748)
+++..+|++|+|-| +..|+++.... ... .+ +.+|. ...++... .++++|+|-|. ..|
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~-~IDAA~~~~~~~k~yFFkG~-------~yW 512 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAGN-------EYW 512 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCS-SCSBCCEETTTTEEEEEETT-------EEE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCc-cceEEEEECCCCEEEEEecC-------EEE
Confidence 44556899999977 46777776542 111 11 12332 12222222 26899999874 789
Q ss_pred EEECCCC--cE-EEccC--CCCCCcceeEEE---ECCEEEEEeccCCCccccEEEEEeCCCCcEE-----Ecc-CC-CCC
Q psy10286 622 RYDPKTD--EW-TSVKP--MLTKRCRLGVAA---LNNKIYVCGGYDGAIFLQSVEMYDPITDEWK-----MIA-SM-NVM 686 (748)
Q Consensus 622 ~yd~~~~--~W-~~~~~--~p~~r~~~~~~~---~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~-----~~~-~~-p~~ 686 (748)
+|+..+. .+ ..+.. +|..-...-++. .++++|++-| +..|+||..+++-. .+. .. ..+
T Consensus 513 ry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~~w~G~p 585 (631)
T 1ck7_A 513 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIP 585 (631)
T ss_dssp EEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTTSCSSCC
T ss_pred EECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHhhcCCCC
Confidence 9985310 00 11211 121111122222 3689999987 68999998765311 111 11 112
Q ss_pred CcceEEEEEC--CEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 687 RSRVALVANM--GKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 687 r~~~~~~~~~--~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
..--++.... +++|+|-| +..|.||..+..
T Consensus 586 ~~iDAAf~~~~~g~~YFFkG-------~~Ywr~d~~~~~ 617 (631)
T 1ck7_A 586 DNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 617 (631)
T ss_dssp TTCCEEECCTTSCBCEEEET-------TEEECCBTTBTT
T ss_pred CCCcEeEEEcCCCeEEEEEC-------CEEEEEeCccce
Confidence 2223333333 89999977 356777765543
No 380
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=62.29 E-value=2.1e+02 Score=32.40 Aligned_cols=237 Identities=13% Similarity=0.116 Sum_probs=124.0
Q ss_pred eEEEEeCCCCceEEccC-C-----Cc---ccc-eeEEEEE---CCEEEEEccCC-CCCCCCeEEEEECCCCeEEEccC-C
Q psy10286 478 TVEVFDPLVGRWQMAEA-M-----SM---LRS-RVGVAVM---KNRLYAFGGYN-GSERLSTVEEFDPVRRVWNKVSP-M 542 (748)
Q Consensus 478 ~~~~yd~~~~~W~~~~~-~-----~~---~r~-~~~~~~~---~~~iyv~GG~~-~~~~~~~v~~yd~~t~~W~~~~~-~ 542 (748)
.+++-+-.-.+|+.+.. + +. ... -+++++. .+.+|+..|.. .......+++=+-.-.+|+.+.. .
T Consensus 44 gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~ 123 (763)
T 3a0f_A 44 GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPV 123 (763)
T ss_dssp CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSS
T ss_pred cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCc
Confidence 36666666778988765 3 21 122 2333332 36788866531 11122445555555678998752 1
Q ss_pred C-----CCcc-eeEEEEE---CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCC---cceEEEEE----CCEEE
Q psy10286 543 C-----FKRS-AVGAAAL---NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHR---SAGGVIAF----DSYVY 606 (748)
Q Consensus 543 ~-----~~r~-~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r---~~~~~~~~----~~~iy 606 (748)
+ ..|. ...+++. .+.+|+.+. ...+++=+-.-.+|+.+..++... .....+.+ .+.+|
T Consensus 124 ~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~------~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 197 (763)
T 3a0f_A 124 PMGANDMGRNGGERLAVNPHWTDELWFGSR------TQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAY 197 (763)
T ss_dssp CCCTTSTTTTSBCCEEECTTSTTCEEEECS------SSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEE
T ss_pred ccCccccCccccceEEECCCCCCEEEEEeC------CCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEE
Confidence 1 1232 1234443 367887542 134554444567899998766432 22222222 34677
Q ss_pred EEccCCCCcccCeEEEEECCCCcEEEccCCCC--------------------CCcceeEEEE-CCEEEEEeccCC---Cc
Q psy10286 607 ALGGHDGLSIFDSVERYDPKTDEWTSVKPMLT--------------------KRCRLGVAAL-NNKIYVCGGYDG---AI 662 (748)
Q Consensus 607 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~--------------------~r~~~~~~~~-~~~i~v~GG~~~---~~ 662 (748)
+.+...+ .+++=+-.-.+|+.+...|. +...+.++.. ++.+|+...... ..
T Consensus 198 ~~~~~~g-----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 272 (763)
T 3a0f_A 198 VASHAVG-----GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGV 272 (763)
T ss_dssp EEESSTT-----CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCC
T ss_pred EEEeCCC-----eEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCC
Confidence 7654321 35554445568999875442 2233333332 578888753110 01
Q ss_pred cccEEEEEeCCCCcEEEccCCCCC--Cc------------ceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCCceEe
Q psy10286 663 FLQSVEMYDPITDEWKMIASMNVM--RS------------RVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTDSWAF 726 (748)
Q Consensus 663 ~~~~v~~yd~~~~~W~~~~~~p~~--r~------------~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (748)
....+++.+-...+|+.+.+.+.. .+ ++..+.+ .+.||+.+.... ....+++=.=...+|+.
T Consensus 273 ~~g~v~rS~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~gg~~~i~v~~~~~v~~~~~~~~--~~~~l~~S~DgG~tW~~ 350 (763)
T 3a0f_A 273 LYGEVWSYDPTNGNWKHITPSREGANTYPAPTGNKKVVPGGWNGISVGNGDTVVVSTLDAN--GEDSVYLSRDAGNSWKD 350 (763)
T ss_dssp CCEEEEEEETTTTEEEECCTTSSSSCEESCCCCCTTSCCCEEEEEEECSTBCEEEEEESCT--TSCCEEEESBTTSSEEE
T ss_pred cceeEEEEeCCCCceEECCCCCCCCccccccccccccccCCceeEEEcCCCeEEEEecCCC--CCCCEEEECCCCCCccc
Confidence 235788999889999998755431 11 2333333 366777664211 11234433333578988
Q ss_pred c
Q psy10286 727 V 727 (748)
Q Consensus 727 ~ 727 (748)
+
T Consensus 351 ~ 351 (763)
T 3a0f_A 351 L 351 (763)
T ss_dssp H
T ss_pred C
Confidence 7
No 381
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=62.19 E-value=1.6e+02 Score=30.94 Aligned_cols=164 Identities=8% Similarity=-0.067 Sum_probs=76.6
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCC----eEEE-cc--CC--CCCc-ceeEEEEE-CCEEEEE--eCCCCCCCCceEE
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRR----VWNK-VS--PM--CFKR-SAVGAAAL-NDKLYVC--GGYDGVSSLNTVE 574 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~----~W~~-~~--~~--~~~r-~~~~~~~~-~~~iyv~--GG~~~~~~~~~~~ 574 (748)
..++|+-|.. .+.++++|..++ +=.. +. .+ ..+. .-|+.... +| |||. |+..+ ..-..+.
T Consensus 95 r~~l~v~~l~-----s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g-~~~g~v~ 167 (462)
T 2ece_A 95 RRFLIVPGLR-----SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEG-EGPGGIL 167 (462)
T ss_dssp SCEEEEEBTT-----TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTS-CSCCEEE
T ss_pred CCEEEEccCC-----CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCC-CCCCeEE
Confidence 4567776663 367999998776 3222 21 01 1111 23444444 66 8874 33222 2347899
Q ss_pred EEeCCCCeEEEccCCC-CC-CcceEEEEE-C-CEEEEEc---------cCCCC----cccCeEEEEECCCCcEEEccCCC
Q psy10286 575 CYEPDKDQWRIVKSMQ-KH-RSAGGVIAF-D-SYVYALG---------GHDGL----SIFDSVERYDPKTDEWTSVKPML 637 (748)
Q Consensus 575 ~yd~~~~~W~~~~~~~-~~-r~~~~~~~~-~-~~iyv~G---------G~~~~----~~~~~~~~yd~~~~~W~~~~~~p 637 (748)
.+|..+.+=...-+.+ .+ ...+..... + +.+|.-- |.+.. ...+.+..||..+.+ .+..++
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~ 245 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLT 245 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEE
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEe
Confidence 9999877632221111 11 112222222 3 3344331 22211 235789999998763 333333
Q ss_pred CCCccee--EEEE-----CCEEEEEeccCCCccccEEEEEeCCCCcEEEc
Q psy10286 638 TKRCRLG--VAAL-----NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMI 680 (748)
Q Consensus 638 ~~r~~~~--~~~~-----~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 680 (748)
.+..+.. -..+ +...||..-.+.....++|+.|.....+|...
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~ 295 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAE 295 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEE
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEE
Confidence 2211111 1111 34566665421111234555544444777654
No 382
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=62.05 E-value=1e+02 Score=32.16 Aligned_cols=143 Identities=13% Similarity=0.074 Sum_probs=78.3
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CC-EEEEEeCCCCCCCCceEEEEeCCCCeE--
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-ND-KLYVCGGYDGVSSLNTVECYEPDKDQW-- 583 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W-- 583 (748)
++.||+.--. ..+.++|+.+++...+.+ ...+ -.++++. ++ .||+....++ .....+..++... .|
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~-~~~~-P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~g-~~~~ 218 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS-GLSK-VRTICWTHEADSMIITNDQNN-NDRPNNYILTRES-GFKV 218 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC-CCSC-EEEEEECTTSSEEEEEECCSC-TTSEEEEEEEGGG-TSCS
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec-CCCC-cceEEEeCCCCEEEEEeCCCC-cccceEEEEeCCC-ceee
Confidence 4789987531 679999999988877654 1111 2233332 44 4998865332 1223466666543 22
Q ss_pred -EEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CC-EEEEEecc
Q psy10286 584 -RIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NN-KIYVCGGY 658 (748)
Q Consensus 584 -~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~ 658 (748)
..++.+..| +.+++. ++.||+.--. ...+++||+.+..-..+...+....-.+++.. ++ .||+.--.
T Consensus 219 ~~~l~~~~~p---~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 219 ITELTKGQNC---NGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp EEEEEECSSC---CCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred eeeeccCCCc---eEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 233322222 344443 6788887533 24799999987765343322221112233333 34 58988532
Q ss_pred CCCccccEEEEEeCC
Q psy10286 659 DGAIFLQSVEMYDPI 673 (748)
Q Consensus 659 ~~~~~~~~v~~yd~~ 673 (748)
.+.|++++..
T Consensus 291 -----~~~I~~~~~d 300 (430)
T 3tc9_A 291 -----QHYILRSDYD 300 (430)
T ss_dssp -----TTEEEEEEEE
T ss_pred -----CCEEEEEeCC
Confidence 3577776544
No 383
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=61.93 E-value=6.3 Score=42.70 Aligned_cols=43 Identities=14% Similarity=0.220 Sum_probs=36.7
Q ss_pred CCCHHHHHHHHHhhhc-eeEEeech-hHHHHHHHHHHhcchhHHH
Q psy10286 154 GIDAVAMEALINFVYS-GRVTIHSQ-NVQSLMVVASFLQMQKVAD 196 (748)
Q Consensus 154 ~~~~~~~~~~l~flYt-g~~~i~~~-~v~~ll~~A~~l~i~~l~~ 196 (748)
|=++..|+.+|+|+.| |++..+.+ .+..+.+-|++|+++++.-
T Consensus 98 DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E~~f~~i~~~~~ 142 (514)
T 2r9r_B 98 DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAM 142 (514)
T ss_dssp CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHHHHHTTCCHHHH
T ss_pred cCChHHHHHHHHHHhcCCccccCCcccHHHHHHHHHhcCCCHHHH
Confidence 6699999999999999 99987665 4677899999999987653
No 384
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=61.34 E-value=59 Score=38.72 Aligned_cols=176 Identities=12% Similarity=0.049 Sum_probs=96.4
Q ss_pred cceeEEEEECCEEEEEeCCCCCCCCceEEEEeCCCCeEE-EccC----CCCCCcceEEEEE---CCEEEEEccCCCCccc
Q psy10286 546 RSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPDKDQWR-IVKS----MQKHRSAGGVIAF---DSYVYALGGHDGLSIF 617 (748)
Q Consensus 546 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~----~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~ 617 (748)
-.++++...++.+ ++|.-+.......++.|++....|- .... +.....++++++. ++..+++|-- .....
T Consensus 334 q~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP-~~~~~ 411 (1095)
T 3k6s_A 334 QEGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAP-RYQHT 411 (1095)
T ss_dssp CTTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEET-TGGGT
T ss_pred cccccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEcc-ccccc
Confidence 3455555554444 7776554444567788887655443 2221 2233445666543 2344566532 22335
Q ss_pred CeEEEEECCCCcEEEccC----CCCCCcceeEEEEC------CEEEEEeccC--CCccccEEEEEeCCC--CcEEEccCC
Q psy10286 618 DSVERYDPKTDEWTSVKP----MLTKRCRLGVAALN------NKIYVCGGYD--GAIFLQSVEMYDPIT--DEWKMIASM 683 (748)
Q Consensus 618 ~~~~~yd~~~~~W~~~~~----~p~~r~~~~~~~~~------~~i~v~GG~~--~~~~~~~v~~yd~~~--~~W~~~~~~ 683 (748)
..++.|......|+.... -.....++++++.| +.++++|.-. .......+++|.... ..|.....+
T Consensus 412 G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~l 491 (1095)
T 3k6s_A 412 GKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVL 491 (1095)
T ss_dssp CEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSSC
T ss_pred ceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEEe
Confidence 679999888778876542 22335666777642 2477777422 122345788886543 458643222
Q ss_pred ------CCCCcceEEEEEC-------CEEEEEeCCCCCCCCCeEEEEeCCCC-ce
Q psy10286 684 ------NVMRSRVALVANM-------GKLWAIGGYDGVSNLPTVEVYDPSTD-SW 724 (748)
Q Consensus 684 ------p~~r~~~~~~~~~-------~~l~v~GG~~~~~~~~~v~~yd~~~~-~W 724 (748)
+..|++.+++.++ ..|+| |.-........+++|.-..+ .|
T Consensus 492 ~g~~~~~~~~FG~sva~~gD~NgDG~~Dl~V-GAP~~~~~~G~vyi~~g~~~~g~ 545 (1095)
T 3k6s_A 492 YGEQGHPWGRFGAALTVLGDVNGDKLTDVVI-GAPGEEENRGAVYLFHGVLGPSI 545 (1095)
T ss_dssp CCCCSCSSCCBTSCEEEEECSSSSSCCEEEE-ECTTTTTSCCBEEEEEBCSSSCB
T ss_pred ecccCCccccCccceEeecccCCCCCcCEEE-eCCcCCCCCCEEEEecCCCCCCc
Confidence 3567888877652 23544 43222223457899987665 55
No 385
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=60.22 E-value=2.3e+02 Score=32.11 Aligned_cols=197 Identities=12% Similarity=0.185 Sum_probs=108.3
Q ss_pred eEEEEECCCCeEEEccC-C-----CC---CcceeEEEEE----CCEEEEEeCCC-CCCCCceEEEEeCCCCeEEEccC-C
Q psy10286 525 TVEEFDPVRRVWNKVSP-M-----CF---KRSAVGAAAL----NDKLYVCGGYD-GVSSLNTVECYEPDKDQWRIVKS-M 589 (748)
Q Consensus 525 ~v~~yd~~t~~W~~~~~-~-----~~---~r~~~~~~~~----~~~iyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~-~ 589 (748)
.+++-+-.-.+|+.+.. + +. ........++ .+.+|+..|.. .......+++=+-.-.+|+.+.. .
T Consensus 44 gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~ 123 (763)
T 3a0f_A 44 GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPV 123 (763)
T ss_dssp CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSS
T ss_pred cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCc
Confidence 47888888889999865 3 21 1222333333 36889876531 11122445554445678998852 2
Q ss_pred C-----CCCc-ceEEEEE---CCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCC---cceeEEEE----CCEEE
Q psy10286 590 Q-----KHRS-AGGVIAF---DSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKR---CRLGVAAL----NNKIY 653 (748)
Q Consensus 590 ~-----~~r~-~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~----~~~i~ 653 (748)
+ ..|. ...+++. .+.+|+.+.. ..+++=+-.-.+|+.+..++..+ .......+ .+.+|
T Consensus 124 ~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~------~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 197 (763)
T 3a0f_A 124 PMGANDMGRNGGERLAVNPHWTDELWFGSRT------QGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAY 197 (763)
T ss_dssp CCCTTSTTTTSBCCEEECTTSTTCEEEECSS------SCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEE
T ss_pred ccCccccCccccceEEECCCCCCEEEEEeCC------CcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEE
Confidence 1 1121 1244443 3678876421 34665555567899998666432 22223333 24677
Q ss_pred EEeccCCCccccEEEEEeCCCCcEEEccCCCC--------------------CCcceEEEEE-CCEEEEEeCCCC---CC
Q psy10286 654 VCGGYDGAIFLQSVEMYDPITDEWKMIASMNV--------------------MRSRVALVAN-MGKLWAIGGYDG---VS 709 (748)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~--------------------~r~~~~~~~~-~~~l~v~GG~~~---~~ 709 (748)
+.+...+ .+++=+-.-.+|+.+...|. +...+.++.. ++.+|+...... ..
T Consensus 198 ~~~~~~g-----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 272 (763)
T 3a0f_A 198 VASHAVG-----GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGV 272 (763)
T ss_dssp EEESSTT-----CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCC
T ss_pred EEEeCCC-----eEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCC
Confidence 7653221 34444334568999875552 2233333332 688888742110 01
Q ss_pred CCCeEEEEeCCCCceEecCCCCC
Q psy10286 710 NLPTVEVYDPSTDSWAFVAPMCA 732 (748)
Q Consensus 710 ~~~~v~~yd~~~~~W~~~~~~~~ 732 (748)
....+++.+-...+|+.+.+++.
T Consensus 273 ~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 273 LYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp CCEEEEEEETTTTEEEECCTTSS
T ss_pred cceeEEEEeCCCCceEECCCCCC
Confidence 23478898888999999876654
No 386
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=54.82 E-value=96 Score=32.33 Aligned_cols=143 Identities=11% Similarity=0.039 Sum_probs=77.7
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEE-EC-CEEEEEccCCCCcccCeEEEEECCCCcEE-
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIA-FD-SYVYALGGHDGLSIFDSVERYDPKTDEWT- 631 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~- 631 (748)
++.||+.--. ..+.++|+.+++.+.+.. ...+- ..++. -+ +.||+....++. ....+..++... .|.
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~-~~~~P-~~ia~d~~G~~lyvad~~~~~-~~~~v~~~~~~g-~~~~ 218 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS-GLSKV-RTICWTHEADSMIITNDQNNN-DRPNNYILTRES-GFKV 218 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC-CCSCE-EEEEECTTSSEEEEEECCSCT-TSEEEEEEEGGG-TSCS
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec-CCCCc-ceEEEeCCCCEEEEEeCCCCc-ccceEEEEeCCC-ceee
Confidence 4789988431 689999999988877654 11111 22222 23 459988754321 122466666543 232
Q ss_pred --EccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-C-CEEEEEeCC
Q psy10286 632 --SVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-M-GKLWAIGGY 705 (748)
Q Consensus 632 --~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~l~v~GG~ 705 (748)
.+..+ ..-+++++. ++.||+..-. .+.|++||+.+..-..+...+....-..++.. + +.||+.--
T Consensus 219 ~~~l~~~---~~p~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~- 289 (430)
T 3tc9_A 219 ITELTKG---QNCNGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV- 289 (430)
T ss_dssp EEEEEEC---SSCCCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET-
T ss_pred eeeeccC---CCceEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC-
Confidence 22222 222444444 5788887532 25799999987765444333221111223332 3 45898843
Q ss_pred CCCCCCCeEEEEeCC
Q psy10286 706 DGVSNLPTVEVYDPS 720 (748)
Q Consensus 706 ~~~~~~~~v~~yd~~ 720 (748)
..+.|+++++.
T Consensus 290 ----~~~~I~~~~~d 300 (430)
T 3tc9_A 290 ----NQHYILRSDYD 300 (430)
T ss_dssp ----TTTEEEEEEEE
T ss_pred ----CCCEEEEEeCC
Confidence 23467776654
No 387
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=54.72 E-value=1.7e+02 Score=28.90 Aligned_cols=175 Identities=10% Similarity=0.033 Sum_probs=96.2
Q ss_pred ccceEEEEeCCCCc---eEEccCCCcccceeEEEE--ECCEEEEEccCCCCCCCCeEEEEECCCCeEEEc--cCCCCCcc
Q psy10286 475 SLSTVEVFDPLVGR---WQMAEAMSMLRSRVGVAV--MKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKV--SPMCFKRS 547 (748)
Q Consensus 475 ~~~~~~~yd~~~~~---W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~--~~~~~~r~ 547 (748)
....++++++.... +.....+..| .++++ .++.||+.-.. ...++++++....-+.+ ..+..|
T Consensus 55 ~~~~I~r~~~~g~~~~~~~~~~~l~~p---~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~~~~P-- 124 (318)
T 3sov_A 55 SEEAIKRTEFNKTESVQNVVVSGLLSP---DGLACDWLGEKLYWTDSE-----TNRIEVSNLDGSLRKVLFWQELDQP-- 124 (318)
T ss_dssp TTTEEEEEETTSSSCCCEEEEECCSCC---CEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSSE--
T ss_pred CCCcEEEEEccCCCceEEEEcCCCCCc---cEEEEEcCCCeEEEEECC-----CCEEEEEECCCCcEEEEEeCCCCCc--
Confidence 34567777776542 2222222222 23444 37899987532 35788999876432322 223333
Q ss_pred eeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEE
Q psy10286 548 AVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERY 623 (748)
Q Consensus 548 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~y 623 (748)
.+.++. ++.||+.--. ....++++++....-+.+..-.. ..-.+++.- +++||+.-.. ...++++
T Consensus 125 -~giavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~~~~~~l-~~Pnglavd~~~~~lY~aD~~-----~~~I~~~ 193 (318)
T 3sov_A 125 -RAIALDPSSGFMYWTDWG----EVPKIERAGMDGSSRFIIINSEI-YWPNGLTLDYEEQKLYWADAK-----LNFIHKS 193 (318)
T ss_dssp -EEEEEEGGGTEEEEEECS----SSCEEEEEETTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEE
T ss_pred -cEEEEeCCCCEEEEEecC----CCCEEEEEEcCCCCeEEEEECCC-CCccEEEEeccCCEEEEEECC-----CCEEEEE
Confidence 234443 6899987421 13578999887543222211111 111244443 7899998543 4679999
Q ss_pred ECCCCcEEEccCCCCCCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc
Q psy10286 624 DPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE 676 (748)
Q Consensus 624 d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 676 (748)
|.....-+.+... ....-.++++.++.+|+.--. ...|+++|+.+.+
T Consensus 194 d~dG~~~~~~~~~-~~~~P~glav~~~~lywtd~~-----~~~V~~~~~~~G~ 240 (318)
T 3sov_A 194 NLDGTNRQAVVKG-SLPHPFALTLFEDILYWTDWS-----THSILACNKYTGE 240 (318)
T ss_dssp ETTSCSCEEEECS-CCSCEEEEEEETTEEEEEETT-----TTEEEEEETTTCC
T ss_pred cCCCCceEEEecC-CCCCceEEEEeCCEEEEEecC-----CCeEEEEECCCCC
Confidence 9875443333221 112235677778999998432 3588999986543
No 388
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=54.36 E-value=8.1 Score=34.70 Aligned_cols=33 Identities=12% Similarity=0.364 Sum_probs=27.0
Q ss_pred EecccHHHHHHHhhhcCcHHHHHHHHHHHhhcC
Q psy10286 237 IHSQNVQSLMVVASFLQMQKVADACADFLKKRF 269 (748)
Q Consensus 237 ~~~~~~~~l~~~a~~~~l~~l~~~c~~~l~~~l 269 (748)
+....+.+|+.+|++|++..|.+.|+..+...+
T Consensus 101 vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~i 133 (169)
T 3v7d_A 101 VDQEMLYEIILAANYLNIKPLLDAGCKVVAEMI 133 (169)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 456678899999999999999999988886533
No 389
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=53.76 E-value=1.8e+02 Score=28.98 Aligned_cols=182 Identities=10% Similarity=0.066 Sum_probs=79.7
Q ss_pred EEEEECCCCeEEEccCCC--CCcceeEEEEE-CCE-EEEEeCCCCCCCCceEEEEeCC-CCeEEEccCCCC-CCcceEEE
Q psy10286 526 VEEFDPVRRVWNKVSPMC--FKRSAVGAAAL-NDK-LYVCGGYDGVSSLNTVECYEPD-KDQWRIVKSMQK-HRSAGGVI 599 (748)
Q Consensus 526 v~~yd~~t~~W~~~~~~~--~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~~~-~r~~~~~~ 599 (748)
++.+|+.+++.+.+...+ ....-..++.. +++ +|+.+. + .+..||.. +++.......+. ....+.+.
T Consensus 18 ~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~-~------~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~ 90 (365)
T 1jof_A 18 TVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-K------KWSSFAVKSPTEIVHEASHPIGGHPRANDA 90 (365)
T ss_dssp EEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-T------EEEEEEEEETTEEEEEEEEECCSSGGGGCT
T ss_pred EEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc-c------eEEEEEECCCCCEEEeeEeecCCCCccEEE
Confidence 445678888877654321 11122233333 554 665543 1 67888875 555443321110 11112122
Q ss_pred EECCE-EEEEccCCC----Cc-----ccCeEEEEECCC-CcEEE-ccCC--CCCCcceeEEEE-CC-EEEEEeccCCCcc
Q psy10286 600 AFDSY-VYALGGHDG----LS-----IFDSVERYDPKT-DEWTS-VKPM--LTKRCRLGVAAL-NN-KIYVCGGYDGAIF 663 (748)
Q Consensus 600 ~~~~~-iyv~GG~~~----~~-----~~~~~~~yd~~~-~~W~~-~~~~--p~~r~~~~~~~~-~~-~i~v~GG~~~~~~ 663 (748)
.-+|+ +|++.+..+ .. ....+..|+... .+... +... ......++++.- ++ .+|+.. ..
T Consensus 91 spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~-~~---- 165 (365)
T 1jof_A 91 DTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD-LT---- 165 (365)
T ss_dssp TSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-TT----
T ss_pred CCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc-CC----
Confidence 22555 354322100 00 123466777653 33322 1111 112223344333 44 466543 21
Q ss_pred ccEEEEEeCC-CCcEEEccCCC--C-CCcceEEEEE-CC-EEEEEeCCCCCCCCCeEEEE--eCCCCce
Q psy10286 664 LQSVEMYDPI-TDEWKMIASMN--V-MRSRVALVAN-MG-KLWAIGGYDGVSNLPTVEVY--DPSTDSW 724 (748)
Q Consensus 664 ~~~v~~yd~~-~~~W~~~~~~p--~-~r~~~~~~~~-~~-~l~v~GG~~~~~~~~~v~~y--d~~~~~W 724 (748)
.+.+++||.. +.+...+.... . ...-..++.. ++ .+|+.+..+ +.+.+| |+.+++.
T Consensus 166 ~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 166 ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG-----NRICEYVIDPATHMP 229 (365)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCE
T ss_pred CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC-----CeEEEEEEeCCCCcE
Confidence 2579999987 67665543322 1 1111222222 44 666665322 245555 5556654
No 390
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=49.42 E-value=1.7e+02 Score=29.78 Aligned_cols=84 Identities=8% Similarity=0.034 Sum_probs=49.8
Q ss_pred CCEEEEEec-c-CC-CccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CC-EEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 649 NNKIYVCGG-Y-DG-AIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MG-KLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 649 ~~~i~v~GG-~-~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
++++|+.-. . .. -...+.+.++|..+++ .+..++.+..-+++... ++ ++|+..+.. .++|.++|..+
T Consensus 275 g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~----~~~VsVID~~t-- 346 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLAAAENTSSVTASVGQ--TSGPISNGHDSDAIIAAQDGASDNYANSAG----TEVLDIYDAAS-- 346 (368)
T ss_dssp TTEEEEEEEECSSCTTSCEEEEEEEESSSCC--EEECCEEEEEECEEEECCSSSCEEEEEETT----TTEEEEEESSS--
T ss_pred CCEEEEEeccccCcccccCCCEEEEECCCCe--EEEEEECCCCcceEEECCCCCEEEEEccCC----CCeEEEEECCC--
Confidence 568888532 1 10 0001345599988864 45556555555555554 44 477776521 25799999854
Q ss_pred eEecCCCCCCCcceEEE
Q psy10286 724 WAFVAPMCAHEGGVGVG 740 (748)
Q Consensus 724 W~~~~~~~~~r~~~~~~ 740 (748)
|+.+..++..+.-++.+
T Consensus 347 ~kvv~~I~vg~~P~~i~ 363 (368)
T 1mda_H 347 DQDQSSVELDKGPESLS 363 (368)
T ss_dssp CEEEEECCCCSCCCEEE
T ss_pred CcEEEEEECCCCCCEEE
Confidence 66777777777666554
No 391
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=47.96 E-value=81 Score=30.69 Aligned_cols=130 Identities=13% Similarity=0.080 Sum_probs=61.9
Q ss_pred ceeEEEEECCEEEEEccCCCCCCCCeEEEEECC--CCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEe
Q psy10286 500 SRVGVAVMKNRLYAFGGYNGSERLSTVEEFDPV--RRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYE 577 (748)
Q Consensus 500 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~--t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 577 (748)
..|+++.-++.+|..|-..... +.. |. ......+ -... .|+++..+|++|.+|-....+ +.. -.
T Consensus 72 ~~hs~~l~~G~v~~wG~n~~Gq-lg~-----P~~~~~~v~~i---a~G~-~hs~al~~G~v~~wG~n~~gq-lg~---~~ 137 (282)
T 3qhy_B 72 NYHSLALKDGEVIAWGGNEDGQ-TTV-----PAEARSGVDAI---AAGA-WASYALKDGKVIAWGDDSDGQ-TTV---PA 137 (282)
T ss_dssp SSEEEEEETTEEEEEECCTTST-TCC-----CGGGSSSEEEE---EEET-TEEEEEETTEEEEEECCTTST-TSC---CG
T ss_pred CCEEEEEECCEEEEeeCCCCCC-CCC-----CcccCCCeEEE---ECcC-CEEEEEeCCeEEEecCCCCCc-CCC---Cc
Confidence 3466666699999999543111 100 10 0112222 1222 344443499999998643211 110 00
Q ss_pred CCCCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECC--CCcEEEccCCCCCCcceeEEEECCEEEEE
Q psy10286 578 PDKDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPK--TDEWTSVKPMLTKRCRLGVAALNNKIYVC 655 (748)
Q Consensus 578 ~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~~~~i~v~ 655 (748)
+.......+. .-..|+++..++.+|.+|-..... +. -|. ......+ .....|+++.-++++|..
T Consensus 138 ~~~~~i~~i~----~G~~~~~~l~~G~v~~wG~n~~gq-lg-----~p~~~~~~v~~i----~~G~~hs~al~~G~v~~w 203 (282)
T 3qhy_B 138 EAQSGVTALD----GGVYTALAVKNGGVIAWGDNYFGQ-TT-----VPAEAQSGVDDV----AGGIFHSLALKDGKVIAW 203 (282)
T ss_dssp GGGSSEEEEE----ECSSEEEEEETTEEEEEECCTTST-TS-----CCGGGGSSEEEE----EECSSEEEEEETTEEEEE
T ss_pred cCCCCeEEEE----cccCEEEEEECCEEEEecCCCCCC-CC-----CceecCCCeEEE----EecCCEEEEEECCeEEEE
Confidence 0011122221 123466666699999999653221 11 000 1122222 123456666678999999
Q ss_pred ec
Q psy10286 656 GG 657 (748)
Q Consensus 656 GG 657 (748)
|-
T Consensus 204 G~ 205 (282)
T 3qhy_B 204 GD 205 (282)
T ss_dssp EC
T ss_pred EC
Confidence 85
No 392
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=46.90 E-value=3.1e+02 Score=29.75 Aligned_cols=145 Identities=14% Similarity=0.042 Sum_probs=75.3
Q ss_pred CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc-CCCCC-CcceEEEEE-CCEEEEEccCCCCcccCeEEEEECCCCc--
Q psy10286 555 NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK-SMQKH-RSAGGVIAF-DSYVYALGGHDGLSIFDSVERYDPKTDE-- 629 (748)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~-- 629 (748)
+|+..+.|+.++ .+..||..+ .+.... .++.+ +..++++.. +|+..+.||.++ .+..||..++.
T Consensus 96 dG~~LAs~s~dg-----~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DG-----tVkIWd~~~~~l~ 164 (588)
T 2j04_A 96 IDDWMAVLSNNG-----NVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDG-----ELQFFSIRKNSEN 164 (588)
T ss_dssp SSSCEEEEETTS-----CEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTS-----EEEEEECCCCTTT
T ss_pred CCCEEEEEeCCC-----cEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCC-----EEEEEECCCCccc
Confidence 677667766543 466677433 444433 22222 233444433 788888888754 68889988763
Q ss_pred ------EEEccCCCC--CCcceeEEEECCEEEEEeccCCCccccEEEEEeCCCCc----EEEccCCCCCCcceEEEEECC
Q psy10286 630 ------WTSVKPMLT--KRCRLGVAALNNKIYVCGGYDGAIFLQSVEMYDPITDE----WKMIASMNVMRSRVALVANMG 697 (748)
Q Consensus 630 ------W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~----W~~~~~~p~~r~~~~~~~~~~ 697 (748)
...+..-.. ...-.+.+...+. ++.||.+ +.+..+|..++. |..+..... ..-.+++..+
T Consensus 165 ~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D-----~tVrlWd~~~~~~~~~~~tL~~~h~-~~V~svaFsg- 236 (588)
T 2j04_A 165 TPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSN-----NSVFSMTVSASSHQPVSRMIQNASR-RKITDLKIVD- 236 (588)
T ss_dssp CCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETT-----CCEEEECCCSSSSCCCEEEEECCCS-SCCCCEEEET-
T ss_pred cccceeeeeeecccccccccEEEEEEcCCc-EEEEeCC-----CeEEEEECCCCccccceeeeccccc-CcEEEEEEEC-
Confidence 222211011 1122333333444 6666653 578888887765 344422111 1122222334
Q ss_pred EEEEEeCCCCCCCCCeEEEEeCCCCce
Q psy10286 698 KLWAIGGYDGVSNLPTVEVYDPSTDSW 724 (748)
Q Consensus 698 ~l~v~GG~~~~~~~~~v~~yd~~~~~W 724 (748)
..++.+| + ..|.+||..++.-
T Consensus 237 ~~LASa~-~-----~tIkLWd~~~~~~ 257 (588)
T 2j04_A 237 YKVVLTC-P-----GYVHKIDLKNYSI 257 (588)
T ss_dssp TEEEEEC-S-----SEEEEEETTTTEE
T ss_pred CEEEEEe-C-----CeEEEEECCCCeE
Confidence 4444444 1 3799999887765
No 393
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=45.52 E-value=2.7e+02 Score=28.52 Aligned_cols=126 Identities=17% Similarity=0.283 Sum_probs=76.6
Q ss_pred CCeEEE--ccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceE--EEEe-----CCCCeEEEccC-CCCCCcceEEEEEC
Q psy10286 533 RRVWNK--VSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTV--ECYE-----PDKDQWRIVKS-MQKHRSAGGVIAFD 602 (748)
Q Consensus 533 t~~W~~--~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~--~~yd-----~~~~~W~~~~~-~~~~r~~~~~~~~~ 602 (748)
.+.|+. ++.+|..-.-|+.+.+++.-|++|=.+|...-..+ ..|. |..-.=+.+++ ....-...+.-+++
T Consensus 269 ~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYd 348 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYD 348 (670)
T ss_dssp TSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEET
T ss_pred cCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhC
Confidence 445643 45667777889999999888899865543322222 2221 11111223322 12222334556789
Q ss_pred CEEEEEc-cCCCCcccCeEEEEECCCCcEEEcc-CCCCCCcceeEEEECCEEEEEecc
Q psy10286 603 SYVYALG-GHDGLSIFDSVERYDPKTDEWTSVK-PMLTKRCRLGVAALNNKIYVCGGY 658 (748)
Q Consensus 603 ~~iyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~ 658 (748)
|.+|++- |..+...-+.+.+-+.....|+.+. +-..-....-.+.+++.||+||-.
T Consensus 349 gvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 349 GVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp TEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred CEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 9999986 4444455567888888888999875 222333344467789999999963
No 394
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=43.13 E-value=2.5e+02 Score=27.62 Aligned_cols=125 Identities=12% Similarity=0.111 Sum_probs=65.7
Q ss_pred EEEEE-CCEEEEEccC-CCCCCCCeEEEEECCCCeEEEccCC---C-CC-cceeEEEEE-CCEEEEEeCCCCCCCCceEE
Q psy10286 503 GVAVM-KNRLYAFGGY-NGSERLSTVEEFDPVRRVWNKVSPM---C-FK-RSAVGAAAL-NDKLYVCGGYDGVSSLNTVE 574 (748)
Q Consensus 503 ~~~~~-~~~iyv~GG~-~~~~~~~~v~~yd~~t~~W~~~~~~---~-~~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~ 574 (748)
.+++. +|++|+.... .+. . ..++.++ +.+-...+.. + .. ..-++++.- ++++|+..-.........+.
T Consensus 21 ~va~~~~g~~~v~~~~~~~~-~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 21 NITLTPDGRLFLSLHQFYQP-E-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp EEEECTTSCEEEEECGGGCC-S-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred eEEECCCCCEEEEeCCCCCC-c-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 34443 7889987532 221 1 5678887 4544333221 0 11 233444443 58999985210000135799
Q ss_pred EEeCCCCeEEEccCCCC----C-CcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCc-EEEc
Q psy10286 575 CYEPDKDQWRIVKSMQK----H-RSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDE-WTSV 633 (748)
Q Consensus 575 ~yd~~~~~W~~~~~~~~----~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~ 633 (748)
+||+.+++-...-.++. + ..-..+++. ++.+|+..... .....+.+||+.+++ |..+
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--GGGCEEEEEETTTCCEEEEC
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--CCCCeEEEEECCCCCEEEEe
Confidence 99999887432222221 1 122444444 57899874310 013579999998654 5544
No 395
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=41.18 E-value=3.7e+02 Score=30.02 Aligned_cols=102 Identities=9% Similarity=0.005 Sum_probs=59.1
Q ss_pred cCeEEEEECCC--CcEEEccCCCCCCcceeEEEECCEEEEEeccCC-----CccccEEEEEeCCC--------CcEEEc-
Q psy10286 617 FDSVERYDPKT--DEWTSVKPMLTKRCRLGVAALNNKIYVCGGYDG-----AIFLQSVEMYDPIT--------DEWKMI- 680 (748)
Q Consensus 617 ~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~-----~~~~~~v~~yd~~~--------~~W~~~- 680 (748)
.+.++..|... ..|.++ ..| +...-....++++|+....+. ......+...|..+ ..|+.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~l-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKI-NMP--SDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF 344 (711)
T ss_dssp CEEEEEEECSSSSCEEEEC-CSC--TTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE
T ss_pred ceeEEEEcCCCCCCcceEe-ecC--CcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE
Confidence 36778777653 678777 223 322223566899999764431 11345788888654 468873
Q ss_pred cCCCCCCcceEEEEECCEEEEEeCCCCCCCCCeEEEEeCCCCceE
Q psy10286 681 ASMNVMRSRVALVANMGKLWAIGGYDGVSNLPTVEVYDPSTDSWA 725 (748)
Q Consensus 681 ~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (748)
.+- ..+.--.+...++.+++..-.++ ...++++|+.++.|.
T Consensus 345 ~~~-~~~~l~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~g~~~ 385 (711)
T 4hvt_A 345 TPT-ANEVFNFISTTKDRVFLATYDNV---VAKVVTFTLENEQWT 385 (711)
T ss_dssp CCC-TTEEEEEEEECSSCEEEEEEETT---EEEEEEECEETTEEC
T ss_pred CCC-CCCeEEEEEEECCEEEEEEEECC---EEEEEEEECCCCceE
Confidence 322 22333344455677776643322 236788888778774
No 396
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=41.14 E-value=1.5e+02 Score=35.16 Aligned_cols=147 Identities=14% Similarity=0.053 Sum_probs=81.9
Q ss_pred cceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEcc-----CCCCCCcceeEEEE---CCEEEEEeccCCCcccc
Q psy10286 594 SAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVK-----PMLTKRCRLGVAAL---NNKIYVCGGYDGAIFLQ 665 (748)
Q Consensus 594 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-----~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~ 665 (748)
.++++....+.+ ++|.-........++.|+.....|-.-. .+.....++++++. ++..+|+|.-.. ....
T Consensus 335 ~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~~-~~~G 412 (1095)
T 3k6s_A 335 EGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRY-QHTG 412 (1095)
T ss_dssp TTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETTG-GGTC
T ss_pred ccccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEcccc-cccc
Confidence 445555555544 7776544445567888887655543322 12233345555543 234567774321 2346
Q ss_pred EEEEEeCCCCcEEEccC----CCCCCcceEEEEEC------CEEEEEeCCC--CCCCCCeEEEEeCCC--CceEecCCC-
Q psy10286 666 SVEMYDPITDEWKMIAS----MNVMRSRVALVANM------GKLWAIGGYD--GVSNLPTVEVYDPST--DSWAFVAPM- 730 (748)
Q Consensus 666 ~v~~yd~~~~~W~~~~~----~p~~r~~~~~~~~~------~~l~v~GG~~--~~~~~~~v~~yd~~~--~~W~~~~~~- 730 (748)
.+++|......|..... -....++++++..| ..++++|.-. .......|++|.... ..|.....+
T Consensus 413 ~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~l~ 492 (1095)
T 3k6s_A 413 KAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLY 492 (1095)
T ss_dssp EEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSSCC
T ss_pred eEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEEee
Confidence 89999888778876532 22345667777642 3577777422 122334688886544 458743332
Q ss_pred -----CCCCcceEEEEe
Q psy10286 731 -----CAHEGGVGVGVI 742 (748)
Q Consensus 731 -----~~~r~~~~~~~~ 742 (748)
+.+|++.+.+.+
T Consensus 493 g~~~~~~~~FG~sva~~ 509 (1095)
T 3k6s_A 493 GEQGHPWGRFGAALTVL 509 (1095)
T ss_dssp CCCSCSSCCBTSCEEEE
T ss_pred cccCCccccCccceEee
Confidence 357778877653
No 397
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=40.40 E-value=4e+02 Score=29.18 Aligned_cols=172 Identities=10% Similarity=0.033 Sum_probs=98.0
Q ss_pred CeEEEEECCCCeEEEccCCCCCcceeEEEEE--CCEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEE-
Q psy10286 524 STVEEFDPVRRVWNKVSPMCFKRSAVGAAAL--NDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIA- 600 (748)
Q Consensus 524 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~- 600 (748)
.++.+.|+.+..-...-+++.-+...+++.. +++||+.-.. ...++++++.....+.+...... .-.++++
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~-----~~~I~r~~~~g~~~~~v~~~g~~-~P~GlAvD 88 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS-----LKTISRAFMNGSALEHVVEFGLD-YPEGMAVD 88 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCS-CCCEEEEE
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC-----CCeEEEEECCCCCcEEEEeCCCC-CcceEEEE
Confidence 4677778776543333333333344455554 6899998542 35788898877655554332211 1124444
Q ss_pred -ECCEEEEEccCCCCcccCeEEEEECCCCcEEEc--cCCCCCCcceeEEEE--CCEEEEEe-ccCCCccccEEEEEeCCC
Q psy10286 601 -FDSYVYALGGHDGLSIFDSVERYDPKTDEWTSV--KPMLTKRCRLGVAAL--NNKIYVCG-GYDGAIFLQSVEMYDPIT 674 (748)
Q Consensus 601 -~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~r~~~~~~~~--~~~i~v~G-G~~~~~~~~~v~~yd~~~ 674 (748)
.++.||+.-.. ...++++++....=+.+ ..+..| .++++- ++.||+.- |. ...|++.++..
T Consensus 89 ~~~~~LY~tD~~-----~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g~-----~~~I~r~~~dG 155 (628)
T 4a0p_A 89 WLGKNLYWADTG-----TNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEWGG-----KPKIDRAAMDG 155 (628)
T ss_dssp TTTTEEEEEETT-----TTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEECSS-----SCEEEEEETTS
T ss_pred eCCCEEEEEECC-----CCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCCCC-----CCEEEEEeCCC
Confidence 47899998553 35799999875543332 223233 244444 68999885 31 35889998876
Q ss_pred CcEEEccC-CCCCCcceEEEEE--CCEEEEEeCCCCCCCCCeEEEEeCCCC
Q psy10286 675 DEWKMIAS-MNVMRSRVALVAN--MGKLWAIGGYDGVSNLPTVEVYDPSTD 722 (748)
Q Consensus 675 ~~W~~~~~-~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~ 722 (748)
..-+.+.. +.. -.++++- +++||+.=. ..+.|+.+|+...
T Consensus 156 ~~~~~l~~~~~~---P~GlalD~~~~~LY~aD~-----~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 156 SERTTLVPNVGR---ANGLTIDYAKRRLYWTDL-----DTNLIESSNMLGL 198 (628)
T ss_dssp CSCEEEECSCSS---EEEEEEETTTTEEEEEET-----TTTEEEEEETTSC
T ss_pred CceEEEECCCCC---cceEEEccccCEEEEEEC-----CCCEEEEEcCCCC
Confidence 65554432 211 1233333 588888843 2346777777653
No 398
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=39.34 E-value=4.2e+02 Score=29.01 Aligned_cols=221 Identities=12% Similarity=0.076 Sum_probs=0.0
Q ss_pred ceEEEEeCCCCceEEccCCCcccceeEEEEE--CCEEEEEccCCCCCCCCeEEEEECCCC--eEEEccCCCCCcceeEEE
Q psy10286 477 STVEVFDPLVGRWQMAEAMSMLRSRVGVAVM--KNRLYAFGGYNGSERLSTVEEFDPVRR--VWNKVSPMCFKRSAVGAA 552 (748)
Q Consensus 477 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~r~~~~~~ 552 (748)
+++...|.....-......+..+.-.++++. ++.||+. ....+.++++++... .-..+..-...-.+.+.-
T Consensus 18 ~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~s-----D~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD 92 (619)
T 3s94_A 18 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWS-----DVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACD 92 (619)
T ss_dssp SBEEEECCC---------CBCCSCEEEEEEETTTTEEEEE-----ETTTTEEEEEEC-----CEEEECSSCSCEEEEEEE
T ss_pred ccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEE-----ECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEE
Q ss_pred EECCEEEEEeCCCCCCCCceEEEEeCCCCeEEEcc-CCCCCCcceEEEEECCEEEEEc-cCCCCcccCeEEEEECCCCcE
Q psy10286 553 ALNDKLYVCGGYDGVSSLNTVECYEPDKDQWRIVK-SMQKHRSAGGVIAFDSYVYALG-GHDGLSIFDSVERYDPKTDEW 630 (748)
Q Consensus 553 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~~~~~~~~iyv~G-G~~~~~~~~~~~~yd~~~~~W 630 (748)
..+++||+.-. ..+.++++|+....=+.+. .--..-.+-+.-..+|.||+.- |. ...+++.++....-
T Consensus 93 ~~~~~ly~~d~-----~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~-----~~~I~r~~~dG~~~ 162 (619)
T 3s94_A 93 WLGEKLYWTDS-----ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE-----VPKIERAGMDGSSR 162 (619)
T ss_dssp TTTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSS-----SCEEEEEETTSCSC
T ss_pred ecCCEEEEEeC-----CCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCC-----CCEEEEEECCCCce
Q ss_pred EEccCCCCCCcceeEEEE-CCEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEECCEEEEEeCCCCCC
Q psy10286 631 TSVKPMLTKRCRLGVAAL-NNKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVANMGKLWAIGGYDGVS 709 (748)
Q Consensus 631 ~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 709 (748)
+.+..-....-..-++-. +++||+.-.. .+.|+.+|.....=..+.. .....-+++++.++.||+. +.
T Consensus 163 ~~l~~~~~~~P~Glald~~~~~LY~aD~~-----~~~I~~~~~dG~~~~~~~~-~~~~~P~gi~~~~~~ly~t-----d~ 231 (619)
T 3s94_A 163 FIIINSEIYWPNGLTLDYEEQKLYWADAK-----LNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFEDILYWT-----DW 231 (619)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEETT-----TCCEEEESSSCCEEC----------CCCEEESSSEEEEE-----CT
T ss_pred EEEEeCCCCCCcEEEEEccCCEEEEEeCC-----CCeEEEecCCCCccEEEEe-CCCCCceEEEEeCCEEEEe-----cC
Q ss_pred CCCeEEEEeCCCCc
Q psy10286 710 NLPTVEVYDPSTDS 723 (748)
Q Consensus 710 ~~~~v~~yd~~~~~ 723 (748)
..+.|+++|..+++
T Consensus 232 ~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 232 STHSILACNKYTGE 245 (619)
T ss_dssp TTCSEEEEESSSCC
T ss_pred CCCEEEEEECCCCc
No 399
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=39.09 E-value=3.5e+02 Score=28.00 Aligned_cols=143 Identities=13% Similarity=0.076 Sum_probs=75.4
Q ss_pred CEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCe-E-EE
Q psy10286 509 NRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQ-W-RI 585 (748)
Q Consensus 509 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W-~~ 585 (748)
+.||+.-.. ..+.++|+.+++...+.. . ...-.++++- +|.||+....+. .....+..++..... + ..
T Consensus 153 g~Lyv~D~~------~~I~~id~~~g~v~~~~~-~-~~~P~giavd~dG~lyVad~~~~-~~~~gv~~~~~~~~~~~~~~ 223 (433)
T 4hw6_A 153 DDLYWVGQR------DAFRHVDFVNQYVDIKTT-N-IGQCADVNFTLNGDMVVVDDQSS-DTNTGIYLFTRASGFTERLS 223 (433)
T ss_dssp CEEEEECBT------SCEEEEETTTTEEEEECC-C-CSCEEEEEECTTCCEEEEECCSC-TTSEEEEEECGGGTTCCEEE
T ss_pred CEEEEEeCC------CCEEEEECCCCEEEEeec-C-CCCccEEEECCCCCEEEEcCCCC-cccceEEEEECCCCeecccc
Confidence 789997432 679999999888877654 1 1122333333 566998754221 112345556543221 1 12
Q ss_pred ccCCCCCCcceEEEEE--CCEEEEEccCCCCcccCeEEEEECCCCcE-EEccCCCCCCcceeEEEE--CCEEEEEeccCC
Q psy10286 586 VKSMQKHRSAGGVIAF--DSYVYALGGHDGLSIFDSVERYDPKTDEW-TSVKPMLTKRCRLGVAAL--NNKIYVCGGYDG 660 (748)
Q Consensus 586 ~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 660 (748)
++.+..| ..+++. ++.||+.-.. ...+++||+.+... +.+...........++.- ++.||+.--.
T Consensus 224 ~~~~~~P---~giavd~~~G~lyv~d~~-----~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~-- 293 (433)
T 4hw6_A 224 LCNARGA---KTCAVHPQNGKIYYTRYH-----HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG-- 293 (433)
T ss_dssp EEECSSB---CCCEECTTTCCEEECBTT-----CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT--
T ss_pred ccccCCC---CEEEEeCCCCeEEEEECC-----CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC--
Confidence 2222211 233333 6788886543 24799999986665 333211111112233333 3468988532
Q ss_pred CccccEEEEEeCC
Q psy10286 661 AIFLQSVEMYDPI 673 (748)
Q Consensus 661 ~~~~~~v~~yd~~ 673 (748)
.+.|++++..
T Consensus 294 ---~~~I~~~~~d 303 (433)
T 4hw6_A 294 ---KHCIYRVDYN 303 (433)
T ss_dssp ---TTEEEEEEBC
T ss_pred ---CCEEEEEeCC
Confidence 3578886654
No 400
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=37.93 E-value=3.6e+02 Score=27.86 Aligned_cols=142 Identities=16% Similarity=0.117 Sum_probs=74.2
Q ss_pred CEEEEEeCCCCCCCCceEEEEeCCCCeEEEccCCCCCCcceEEEE-ECCEEEEEccCCCCcccCeEEEEECCCCcEE---
Q psy10286 556 DKLYVCGGYDGVSSLNTVECYEPDKDQWRIVKSMQKHRSAGGVIA-FDSYVYALGGHDGLSIFDSVERYDPKTDEWT--- 631 (748)
Q Consensus 556 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~--- 631 (748)
+.||+.-.. ..+.++|+.+++.+.+.. ...+ -..++. -++.||+....+.. ....+..++.... |.
T Consensus 153 g~Lyv~D~~------~~I~~id~~~g~v~~~~~-~~~~-P~giavd~dG~lyVad~~~~~-~~~gv~~~~~~~~-~~~~~ 222 (433)
T 4hw6_A 153 DDLYWVGQR------DAFRHVDFVNQYVDIKTT-NIGQ-CADVNFTLNGDMVVVDDQSSD-TNTGIYLFTRASG-FTERL 222 (433)
T ss_dssp CEEEEECBT------SCEEEEETTTTEEEEECC-CCSC-EEEEEECTTCCEEEEECCSCT-TSEEEEEECGGGT-TCCEE
T ss_pred CEEEEEeCC------CCEEEEECCCCEEEEeec-CCCC-ccEEEECCCCCEEEEcCCCCc-ccceEEEEECCCC-eeccc
Confidence 799987431 689999999888877654 1111 122232 25568887643211 1123556654322 21
Q ss_pred EccCCCCCCcceeEEEE--CCEEEEEeccCCCccccEEEEEeCCCCcE-EEccCCCCCCcceEEEEE--CCEEEEEeCCC
Q psy10286 632 SVKPMLTKRCRLGVAAL--NNKIYVCGGYDGAIFLQSVEMYDPITDEW-KMIASMNVMRSRVALVAN--MGKLWAIGGYD 706 (748)
Q Consensus 632 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 706 (748)
.++.+ ..-.++++. ++.||+.-.. .+.|++||+.+... ..+...........++.. ++.|||.--
T Consensus 223 ~~~~~---~~P~giavd~~~G~lyv~d~~-----~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~-- 292 (433)
T 4hw6_A 223 SLCNA---RGAKTCAVHPQNGKIYYTRYH-----HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN-- 292 (433)
T ss_dssp EEEEC---SSBCCCEECTTTCCEEECBTT-----CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET--
T ss_pred ccccc---CCCCEEEEeCCCCeEEEEECC-----CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC--
Confidence 22211 122333333 5788887532 25799999986655 333211111112233333 346998843
Q ss_pred CCCCCCeEEEEeCC
Q psy10286 707 GVSNLPTVEVYDPS 720 (748)
Q Consensus 707 ~~~~~~~v~~yd~~ 720 (748)
..+.|+++|+.
T Consensus 293 ---~~~~I~~~~~d 303 (433)
T 4hw6_A 293 ---GKHCIYRVDYN 303 (433)
T ss_dssp ---TTTEEEEEEBC
T ss_pred ---CCCEEEEEeCC
Confidence 23578887654
No 401
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=36.61 E-value=4.4e+02 Score=28.55 Aligned_cols=173 Identities=10% Similarity=0.035 Sum_probs=90.0
Q ss_pred CCEEEEEccCCCCCCCCeEEEEECCCCeEEEcc-CCC-CCcceeEEEEE-CCEEEEEeCCCCCCCCceEEEEeCCCCe--
Q psy10286 508 KNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVS-PMC-FKRSAVGAAAL-NDKLYVCGGYDGVSSLNTVECYEPDKDQ-- 582 (748)
Q Consensus 508 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~-~~~-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~-- 582 (748)
+|+..+.|+.++ .+..||..+ .+.... .++ ..+..++++.. +|+..+.||.+ ..+..||..++.
T Consensus 96 dG~~LAs~s~dg-----~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D-----GtVkIWd~~~~~l~ 164 (588)
T 2j04_A 96 IDDWMAVLSNNG-----NVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED-----GELQFFSIRKNSEN 164 (588)
T ss_dssp SSSCEEEEETTS-----CEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT-----SEEEEEECCCCTTT
T ss_pred CCCEEEEEeCCC-----cEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC-----CEEEEEECCCCccc
Confidence 777777777543 467777433 444433 222 12345555543 88888888865 468889988763
Q ss_pred ------EEEcc-CCC-CCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCc----EEEccCCCCCCc-ceeEEEEC
Q psy10286 583 ------WRIVK-SMQ-KHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDE----WTSVKPMLTKRC-RLGVAALN 649 (748)
Q Consensus 583 ------W~~~~-~~~-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~-~~~~~~~~ 649 (748)
...+. ... ....-.+++...+. ++.+|.+ +.+..+|..++. |..+.. ..+. -.+++..+
T Consensus 165 ~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D-----~tVrlWd~~~~~~~~~~~tL~~--~h~~~V~svaFsg 236 (588)
T 2j04_A 165 TPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSN-----NSVFSMTVSASSHQPVSRMIQN--ASRRKITDLKIVD 236 (588)
T ss_dssp CCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETT-----CCEEEECCCSSSSCCCEEEEEC--CCSSCCCCEEEET
T ss_pred cccceeeeeeecccccccccEEEEEEcCCc-EEEEeCC-----CeEEEEECCCCccccceeeecc--cccCcEEEEEEEC
Confidence 12221 011 11122334444455 6666654 457788887665 334322 1221 22222234
Q ss_pred CEEEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEE--E-CCEEEEEeCCCC
Q psy10286 650 NKIYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVA--N-MGKLWAIGGYDG 707 (748)
Q Consensus 650 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~-~~~l~v~GG~~~ 707 (748)
..++.++. ..|..||..+..=..... ...-.-..++. . +++.++.++.++
T Consensus 237 -~~LASa~~------~tIkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG 289 (588)
T 2j04_A 237 -YKVVLTCP------GYVHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLMSNKTS 289 (588)
T ss_dssp -TEEEEECS------SEEEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEECSSCE
T ss_pred -CEEEEEeC------CeEEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCC
Confidence 45555541 589999998876644321 11111222333 2 456777776443
No 402
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=32.61 E-value=16 Score=30.81 Aligned_cols=39 Identities=10% Similarity=0.168 Sum_probs=32.0
Q ss_pred hhhHHHHHHHhhcceeEEEecc-cHHHHHHHhhhcCcHHH
Q psy10286 219 SCRAMEALINFAYSGRVTIHSQ-NVQSLMVVASFLQMQKV 257 (748)
Q Consensus 219 ~~~~~~~ll~~~y~~~~~~~~~-~~~~l~~~a~~~~l~~l 257 (748)
+...|..+++|+.+|.+.+... ....+...|++|+|+.+
T Consensus 60 dp~~F~~ILnflR~G~l~~p~~~~~~~l~~Ea~fy~i~~l 99 (124)
T 1s1g_A 60 DPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPE 99 (124)
T ss_dssp CHHHHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHTTCCGG
T ss_pred ChHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCChH
Confidence 5678888999999998876543 46888999999999875
No 403
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=31.17 E-value=80 Score=30.74 Aligned_cols=132 Identities=14% Similarity=0.143 Sum_probs=60.6
Q ss_pred eeEEEEECCEEEEEccCCCCCCCCeEEEEECCCCeEEEccCCCCCcceeEEEEECCEEEEEeCCCCCCCCceEEEEeCC-
Q psy10286 501 RVGVAVMKNRLYAFGGYNGSERLSTVEEFDPVRRVWNKVSPMCFKRSAVGAAALNDKLYVCGGYDGVSSLNTVECYEPD- 579 (748)
Q Consensus 501 ~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~- 579 (748)
.|+++.-++.+|..|-.... .+. + |.. .-..+..+-.. ..|+++.-++++|.+|-....+ +.. |.
T Consensus 34 ~h~~~l~~G~v~~wG~n~~G-qlg-~----p~~-~~~~i~~ia~G-~~hs~~l~~G~v~~wG~n~~Gq-lg~-----P~~ 99 (282)
T 3qhy_B 34 FHGLALKGGKVLGWGANLNG-QLT-M----PAA-TQSGVDAIAAG-NYHSLALKDGEVIAWGGNEDGQ-TTV-----PAE 99 (282)
T ss_dssp SEEEEEETTEEEEEECCSSS-TTS-C----CGG-GGSCCCEEEEC-SSEEEEEETTEEEEEECCTTST-TCC-----CGG
T ss_pred CeEEEEECCEEEEEeCCCCC-CCC-C----Ccc-CCCCEEEEEeC-CCEEEEEECCEEEEeeCCCCCC-CCC-----Ccc
Confidence 45555569999999953311 111 0 100 00001111112 3455555699999998643211 110 10
Q ss_pred -CCeEEEccCCCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEECCEEEEEecc
Q psy10286 580 -KDQWRIVKSMQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAALNNKIYVCGGY 658 (748)
Q Consensus 580 -~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 658 (748)
......++ . -..|+++..++.+|.+|-..... +.. -.+.......+ .....|+++.-++.+|..|-.
T Consensus 100 ~~~~v~~ia---~-G~~hs~al~~G~v~~wG~n~~gq-lg~---~~~~~~~i~~i----~~G~~~~~~l~~G~v~~wG~n 167 (282)
T 3qhy_B 100 ARSGVDAIA---A-GAWASYALKDGKVIAWGDDSDGQ-TTV---PAEAQSGVTAL----DGGVYTALAVKNGGVIAWGDN 167 (282)
T ss_dssp GSSSEEEEE---E-ETTEEEEEETTEEEEEECCTTST-TSC---CGGGGSSEEEE----EECSSEEEEEETTEEEEEECC
T ss_pred cCCCeEEEE---C-cCCEEEEEeCCeEEEecCCCCCc-CCC---CccCCCCeEEE----EcccCEEEEEECCEEEEecCC
Confidence 01111111 1 22355544499999998643211 110 00001112222 123456666669999999853
No 404
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=31.12 E-value=1.2e+02 Score=31.31 Aligned_cols=18 Identities=17% Similarity=0.266 Sum_probs=12.9
Q ss_pred ceeEEEEE-CCEEEEEccC
Q psy10286 500 SRVGVAVM-KNRLYAFGGY 517 (748)
Q Consensus 500 ~~~~~~~~-~~~iyv~GG~ 517 (748)
..|++++. ++.||..|-.
T Consensus 130 ~~h~~alt~~G~v~~wG~n 148 (406)
T 4d9s_A 130 DSHCLAVTMEGEVQSWGRN 148 (406)
T ss_dssp SSEEEEEETTSCEEEEECC
T ss_pred hhheEEEcCCCcEEEeCCC
Confidence 35666665 7899999953
No 405
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=29.57 E-value=24 Score=20.13 Aligned_cols=14 Identities=36% Similarity=0.617 Sum_probs=12.0
Q ss_pred hhHHHHHHHHHHhc
Q psy10286 177 QNVQSLMVVASFLQ 190 (748)
Q Consensus 177 ~~v~~ll~~A~~l~ 190 (748)
.||+.|++||++|+
T Consensus 3 ~nvq~LLeAAeyLE 16 (26)
T 1pd7_B 3 MNIQMLLEAADYLE 16 (26)
T ss_dssp CSTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 47899999999886
No 406
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=29.18 E-value=6.3e+02 Score=28.02 Aligned_cols=147 Identities=9% Similarity=-0.011 Sum_probs=70.2
Q ss_pred eEEEEeCCC---C---eEEEccCCC----CCCcceEEE-EECCEEEEEccCCCCcccCeEEEEECCCCc--EEEccCC--
Q psy10286 572 TVECYEPDK---D---QWRIVKSMQ----KHRSAGGVI-AFDSYVYALGGHDGLSIFDSVERYDPKTDE--WTSVKPM-- 636 (748)
Q Consensus 572 ~~~~yd~~~---~---~W~~~~~~~----~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~-- 636 (748)
.++.+|..+ + ++..+.... ........+ .-+|+++++.-..+ .....++.+|+.+++ |......
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~-~~~~~i~~~d~~tg~~~~~~~~~~~l 307 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRI-QNYSVMDICDYDESSGRWNCLVARQH 307 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESS-TTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCC-CCEEEEEEEECCCCccccceeEEEEe
Confidence 688899988 6 666654210 111111111 23777555433211 113468888987765 4433211
Q ss_pred ----CCCCcc-----eeEEEECCE-EEEEeccCCCccccEEEEEeCCCCcEEEccCCCCCCcceEEEEE-CCEEEEEeCC
Q psy10286 637 ----LTKRCR-----LGVAALNNK-IYVCGGYDGAIFLQSVEMYDPITDEWKMIASMNVMRSRVALVAN-MGKLWAIGGY 705 (748)
Q Consensus 637 ----p~~r~~-----~~~~~~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~ 705 (748)
...... .-+..-+|+ |+++....+ ....++.||..+..-..+..-... ....... +++||..+..
T Consensus 308 ~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~--G~~~l~~~~~~~~~~~~lT~g~~~--v~~~~~~d~~~i~f~~~~ 383 (740)
T 4a5s_A 308 IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEE--GYRHICYFQIDKKDCTFITKGTWE--VIGIEALTSDYLYYISNE 383 (740)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSEEEEEEECTT--SCEEEEEEETTCSSCEESCCSSSC--EEEEEEECSSEEEEEESC
T ss_pred eeccCCceEccCcCCCceEcCCCCEEEEEEEcCC--CceEEEEEECCCCceEecccCCEE--EEEEEEEeCCEEEEEEec
Confidence 111111 112222454 442443221 146899999988766655432111 1112212 6777777654
Q ss_pred -CCCCCCCeEEEEeCCCCc
Q psy10286 706 -DGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 706 -~~~~~~~~v~~yd~~~~~ 723 (748)
.+......++..+..++.
T Consensus 384 ~~~~~~~~~ly~v~~~g~~ 402 (740)
T 4a5s_A 384 YKGMPGGRNLYKIQLIDYT 402 (740)
T ss_dssp GGGCTTCBEEEEEETTEEE
T ss_pred CCCCCceeEEEEEECCCCC
Confidence 012223467777765543
No 407
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=25.31 E-value=5e+02 Score=27.06 Aligned_cols=18 Identities=17% Similarity=0.420 Sum_probs=12.8
Q ss_pred CcceeEEEE-CCEEEEEec
Q psy10286 640 RCRLGVAAL-NNKIYVCGG 657 (748)
Q Consensus 640 r~~~~~~~~-~~~i~v~GG 657 (748)
...|+++.. ++.+|.+|-
T Consensus 321 G~~hs~~lt~~G~v~~wG~ 339 (473)
T 3of7_A 321 GEHHSLILSQDGDLYSCGR 339 (473)
T ss_dssp CSSEEEEEETTSCEEEEEE
T ss_pred CCCeEEEEeCCCeEEEEEC
Confidence 345666665 689999994
No 408
>2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A*
Probab=24.01 E-value=4.1e+02 Score=26.87 Aligned_cols=142 Identities=11% Similarity=0.097 Sum_probs=68.7
Q ss_pred eEEEEECCEEEEEeCCCCCCCCceEEEE-eC--CCCeEEEccCCCCCCcceEEEEE-CCEEEEEccCCCCcccCeEEEEE
Q psy10286 549 VGAAALNDKLYVCGGYDGVSSLNTVECY-EP--DKDQWRIVKSMQKHRSAGGVIAF-DSYVYALGGHDGLSIFDSVERYD 624 (748)
Q Consensus 549 ~~~~~~~~~iyv~GG~~~~~~~~~~~~y-d~--~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd 624 (748)
+++..-+|+|++-.- ....| +- ...+|+....++.+ ....++.. +|+|+++.-....... .++.-
T Consensus 189 ~gI~l~dGrLv~p~~--------~~~~~S~D~~~G~tW~~~~~~~~~-~e~~vve~~dG~L~~~~r~~~g~~r-~v~~S- 257 (386)
T 2xzi_A 189 NGIRLTTGELVIPAM--------GRNIIGRGAPGNRTWSVQRLSGAG-AEGTIVQTPDGKLYRNDRPSQKGYR-MVARG- 257 (386)
T ss_dssp CCEECTTSCEEEEET--------TEEEEEESSTTSCEEEEEECTTCC-SSEEEEECTTSCEEEEECCSSSEEE-EEEEE-
T ss_pred cEEEecCCEEEEEeE--------EEEEEccCCCCCCcccccCcCCCC-CcCEEEEeCCCcEEEEEeCCCCccE-EEEEE-
Confidence 444444677665432 22333 22 46899987666544 34455555 6888887655332111 22221
Q ss_pred CCCCcEEEcc---CCCCCCcceeEEEE---CCEEEEEeccCC--CccccEEEE-EeCCCCcEEEccCC---CCCC----c
Q psy10286 625 PKTDEWTSVK---PMLTKRCRLGVAAL---NNKIYVCGGYDG--AIFLQSVEM-YDPITDEWKMIASM---NVMR----S 688 (748)
Q Consensus 625 ~~~~~W~~~~---~~p~~r~~~~~~~~---~~~i~v~GG~~~--~~~~~~v~~-yd~~~~~W~~~~~~---p~~r----~ 688 (748)
.. .+|+... .+|.+.+..++..+ +..+.++..... ....-.++. .|-...+|...-.+ |... .
T Consensus 258 ~D-~tWt~~~~~~~l~~~~~~~~~i~~~~~~~~~ll~~~p~~~~~R~~l~l~~S~D~~G~tW~~~~~~~~g~~~~~~~~~ 336 (386)
T 2xzi_A 258 TL-EGFGAFAPDAGLPDPACQGSVLRYNSDAPARTIFLNSASGTSRRAMRVRISYDADAKKFNYGRKLEDAKVSGAGHEG 336 (386)
T ss_dssp ET-TEECCCEEEEEEEECSCCCEEEEEESSSSCEEEEEEECSSSCSCCEEEEEECSTTCCCCCCCEEGGGGCCSSSCEEE
T ss_pred eC-CccCcccccCCCCCCCCccEEEEecCCCCCEEEEECCCCCCCCcceEEEEEcCCCCCccCCceEEecCCccccCCce
Confidence 22 8898764 34444444444444 344555543221 111223444 33216678653221 2111 4
Q ss_pred ceEEEE-E-CCEEEEE
Q psy10286 689 RVALVA-N-MGKLWAI 702 (748)
Q Consensus 689 ~~~~~~-~-~~~l~v~ 702 (748)
+++... . +++|+++
T Consensus 337 ~ys~l~~~~dg~l~~l 352 (386)
T 2xzi_A 337 GYSSMTKTGDYKIGAL 352 (386)
T ss_dssp EEEEEEECTTSCEEEE
T ss_pred EeceeEECCCCEEEEE
Confidence 444443 3 5677776
No 409
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=22.88 E-value=3.6e+02 Score=26.92 Aligned_cols=99 Identities=4% Similarity=-0.046 Sum_probs=48.0
Q ss_pred eEEEEeCCCCe--EEEccC--CCCCCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCC-----CCcc
Q psy10286 572 TVECYEPDKDQ--WRIVKS--MQKHRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLT-----KRCR 642 (748)
Q Consensus 572 ~~~~yd~~~~~--W~~~~~--~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-----~r~~ 642 (748)
.++.+|..+++ |+.-.. .|.--........++.+|++.... ...++.||+.++.|..--.++. |-..
T Consensus 21 ~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~----dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~ 96 (339)
T 2be1_A 21 GLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFG----DGNIYYFNAHQGLQKLPLSIRQLVSTSPLHL 96 (339)
T ss_dssp CEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCST----TTEEEEEETTTEEEEEEEEHHHHHTTCSEEE
T ss_pred eEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECC----CCEEEEEECCCCcEEeeeccccceecccccc
Confidence 56777776664 876543 111000001111356777775321 1368999988876653211111 1111
Q ss_pred eeEEEE-------CCEEEEEeccCCCccccEEEEEeCCCCc--EEE
Q psy10286 643 LGVAAL-------NNKIYVCGGYDGAIFLQSVEMYDPITDE--WKM 679 (748)
Q Consensus 643 ~~~~~~-------~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~ 679 (748)
.+.-++ .+..+++|+.+ ..++.+|..+.+ |+.
T Consensus 97 ~~~pvv~~~~~~~~~g~Vy~Gs~~-----g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 97 KTNIVVNDSGKIVEDEKVYTGSMR-----TIMYTINMLNGEIISAF 137 (339)
T ss_dssp ECC----------CCEEEEECEEE-----EEEEEEETTTCCEEEEE
T ss_pred CCCceeecccccccCCEEEEEecC-----CEEEEEECCCCcEEEEE
Confidence 111122 44455556543 467778877765 654
No 410
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=22.78 E-value=1e+03 Score=28.30 Aligned_cols=161 Identities=11% Similarity=0.068 Sum_probs=87.2
Q ss_pred CeEEEEECCCCeEEEccC--CCCCcceeEEEEE--C---CEEEEEeCC-C----CCCCCceEEEEeCCCCeEEEccCCCC
Q psy10286 524 STVEEFDPVRRVWNKVSP--MCFKRSAVGAAAL--N---DKLYVCGGY-D----GVSSLNTVECYEPDKDQWRIVKSMQK 591 (748)
Q Consensus 524 ~~v~~yd~~t~~W~~~~~--~~~~r~~~~~~~~--~---~~iyv~GG~-~----~~~~~~~~~~yd~~~~~W~~~~~~~~ 591 (748)
..+..+||.+ |+.+.. +...-...+++.+ . ...+++|-. . .......+..|+...++.+.+...+.
T Consensus 807 s~i~lidp~t--~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v 884 (1158)
T 3ei3_A 807 HNLLIIDQHT--FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEV 884 (1158)
T ss_dssp EEEEEEETTT--CCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEeCCC--CeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEc
Confidence 3466778765 444432 3333233333333 1 356666641 1 11134567778777777777765444
Q ss_pred CCcceEEEEECCEEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCc-ceeEEEECCEEEEEeccCCCccccEEEEE
Q psy10286 592 HRSAGGVIAFDSYVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRC-RLGVAALNNKIYVCGGYDGAIFLQSVEMY 670 (748)
Q Consensus 592 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~v~~y 670 (748)
.-.-.+++.++|++.+.-| +.+..|+...++.-.......+.. .....+.+++|+|-.-.. .-.+..|
T Consensus 885 ~g~v~al~~~~g~Lla~ig-------~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~----Sv~~~~y 953 (1158)
T 3ei3_A 885 KGAVYSMVEFNGKLLASIN-------STVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMR----SVLLLAY 953 (1158)
T ss_dssp SSCEEEEEEETTEEEEEET-------TEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSB----CEEEEEE
T ss_pred CCcCEEEeeeCCEEEEEcC-------CEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhh----eEEEEEE
Confidence 4444567778887666555 368888876554211100000011 112334577665433221 1245678
Q ss_pred eCCCCcEEEccCCCCCCcceEEEEECC
Q psy10286 671 DPITDEWKMIASMNVMRSRVALVANMG 697 (748)
Q Consensus 671 d~~~~~W~~~~~~p~~r~~~~~~~~~~ 697 (748)
+...++-..++.-..+|.-.++..+++
T Consensus 954 ~~~~~~L~~~a~D~~~~~vta~~~ld~ 980 (1158)
T 3ei3_A 954 KPMEGNFEEIARDFNPNWMSAVEILDD 980 (1158)
T ss_dssp ETTTTEEEEEEECCSCBCEEEEEEEET
T ss_pred EcCCCeEEEEEeecccccEEEEEEEcc
Confidence 999999988887777787666666643
No 411
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=21.96 E-value=20 Score=29.11 Aligned_cols=39 Identities=10% Similarity=0.203 Sum_probs=31.1
Q ss_pred hhhHHHHHHHhhcceeEEEecc-cHHHHHHHhhhcCcHHH
Q psy10286 219 SCRAMEALINFAYSGRVTIHSQ-NVQSLMVVASFLQMQKV 257 (748)
Q Consensus 219 ~~~~~~~ll~~~y~~~~~~~~~-~~~~l~~~a~~~~l~~l 257 (748)
+...|..+++|..+|.+.+... ....+...|++|+|+.+
T Consensus 47 dp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 47 DPDIFRHILNFYRTGKLHYPRHECISAYDEELAFFGLIPE 86 (105)
T ss_dssp CTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHHTCCSC
T ss_pred CcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCCHH
Confidence 5567888999999998876543 46888899999999764
No 412
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=21.38 E-value=8.5e+02 Score=26.87 Aligned_cols=192 Identities=9% Similarity=0.079 Sum_probs=90.7
Q ss_pred eEEEEECCC---C---eEEEccCCC----CCcceeEEE-EECCEEEEEeCCCCCCCCceEEEEeCCCCe--EEEccCC--
Q psy10286 525 TVEEFDPVR---R---VWNKVSPMC----FKRSAVGAA-ALNDKLYVCGGYDGVSSLNTVECYEPDKDQ--WRIVKSM-- 589 (748)
Q Consensus 525 ~v~~yd~~t---~---~W~~~~~~~----~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~-- 589 (748)
.++++|..+ + ++..+.... ...+-...+ .-+|+++++--.. .+....++.+|..+++ |......
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r-~~~~~~i~~~d~~tg~~~~~~~~~~~l 307 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRR-IQNYSVMDICDYDESSGRWNCLVARQH 307 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEES-STTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCC-CCCEEEEEEEECCCCccccceeEEEEe
Confidence 688899998 7 666654311 122222222 2378755543211 1123468888887765 4332211
Q ss_pred ----CCCCc-----ceEEEEECC-EEEEEccCCCCcccCeEEEEECCCCcEEEccCCCCCCcceeEEEE-CCEEEEEecc
Q psy10286 590 ----QKHRS-----AGGVIAFDS-YVYALGGHDGLSIFDSVERYDPKTDEWTSVKPMLTKRCRLGVAAL-NNKIYVCGGY 658 (748)
Q Consensus 590 ----~~~r~-----~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~ 658 (748)
..... ...+..-+| .|+++....+. ...++.||..+.+-..+..-.. ........ ++.||..+..
T Consensus 308 ~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G--~~~l~~~~~~~~~~~~lT~g~~--~v~~~~~~d~~~i~f~~~~ 383 (740)
T 4a5s_A 308 IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG--YRHICYFQIDKKDCTFITKGTW--EVIGIEALTSDYLYYISNE 383 (740)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS--CEEEEEEETTCSSCEESCCSSS--CEEEEEEECSSEEEEEESC
T ss_pred eeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC--ceEEEEEECCCCceEecccCCE--EEEEEEEEeCCEEEEEEec
Confidence 11111 111222255 44434432211 4679999998877666543211 11112223 6678877653
Q ss_pred -CCCccccEEEEEeCCCCcEE-EccCC-CCCCc-ceEEEEE-CCEEEEEeCCCCCCCCCeEEEEeCCCCc
Q psy10286 659 -DGAIFLQSVEMYDPITDEWK-MIASM-NVMRS-RVALVAN-MGKLWAIGGYDGVSNLPTVEVYDPSTDS 723 (748)
Q Consensus 659 -~~~~~~~~v~~yd~~~~~W~-~~~~~-p~~r~-~~~~~~~-~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 723 (748)
.+......++..+.....-. .+... ..... .+..... +++.+++--.. .. ...+++++..+++
T Consensus 384 ~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~-~~-~p~~~l~~~~~~~ 451 (740)
T 4a5s_A 384 YKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSG-PG-LPLYTLHSSVNDK 451 (740)
T ss_dssp GGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECS-BS-SCEEEEEETTTTE
T ss_pred CCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCC-CC-CCEEEEEECCCCc
Confidence 01222457777777654433 33321 11122 2333322 45544432211 11 4567888877654
Done!