Query psy10289
Match_columns 497
No_of_seqs 373 out of 4391
Neff 10.3
Searched_HMMs 46136
Date Fri Aug 16 22:37:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10289.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10289hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4194|consensus 100.0 9.3E-46 2E-50 349.3 7.3 418 52-481 42-465 (873)
2 KOG4194|consensus 100.0 1.3E-44 2.7E-49 341.7 0.7 366 11-440 80-448 (873)
3 PLN00113 leucine-rich repeat r 100.0 1.2E-40 2.7E-45 366.1 23.9 350 91-445 213-585 (968)
4 PLN00113 leucine-rich repeat r 100.0 1E-40 2.2E-45 366.8 22.9 452 5-476 89-570 (968)
5 KOG4237|consensus 100.0 6.1E-33 1.3E-37 251.5 -3.0 386 53-452 34-485 (498)
6 KOG0472|consensus 100.0 4.5E-34 9.7E-39 259.3 -11.0 354 109-473 106-546 (565)
7 KOG0472|consensus 100.0 7.5E-33 1.6E-37 251.3 -5.0 410 5-467 64-563 (565)
8 KOG0444|consensus 100.0 1.6E-32 3.4E-37 262.0 -6.5 345 109-466 24-373 (1255)
9 KOG0444|consensus 100.0 5.3E-31 1.2E-35 251.6 -2.8 331 109-449 47-380 (1255)
10 KOG4237|consensus 99.9 1.1E-27 2.4E-32 217.5 -4.2 322 146-483 51-374 (498)
11 KOG0618|consensus 99.9 3E-27 6.6E-32 235.7 -3.3 269 165-443 219-488 (1081)
12 KOG0618|consensus 99.9 1.8E-26 4E-31 230.2 -0.4 318 111-442 193-511 (1081)
13 PLN03210 Resistant to P. syrin 99.9 1.7E-21 3.7E-26 215.3 25.7 282 115-417 609-903 (1153)
14 PRK15387 E3 ubiquitin-protein 99.9 1.1E-21 2.4E-26 201.9 18.6 265 117-427 201-465 (788)
15 PRK15387 E3 ubiquitin-protein 99.9 1.5E-21 3.1E-26 201.0 19.1 261 141-447 201-461 (788)
16 PLN03210 Resistant to P. syrin 99.9 7E-20 1.5E-24 202.5 25.3 315 111-446 582-909 (1153)
17 PRK15370 E3 ubiquitin-protein 99.8 8.8E-19 1.9E-23 181.7 15.7 248 141-420 178-428 (754)
18 PRK15370 E3 ubiquitin-protein 99.8 1.5E-18 3.2E-23 180.0 16.4 248 118-396 179-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 1.6E-18 3.4E-23 166.9 5.1 275 145-443 2-319 (319)
20 cd00116 LRR_RI Leucine-rich re 99.7 1.5E-18 3.3E-23 167.0 3.1 278 121-418 2-318 (319)
21 KOG0617|consensus 99.6 1.5E-17 3.2E-22 135.0 -4.1 183 282-470 30-214 (264)
22 KOG0617|consensus 99.5 2.4E-16 5.1E-21 128.0 -4.8 157 113-274 29-186 (264)
23 PF14580 LRR_9: Leucine-rich r 99.3 2.7E-12 5.9E-17 109.1 4.7 129 112-244 14-147 (175)
24 PF14580 LRR_9: Leucine-rich r 99.3 3.3E-12 7.1E-17 108.7 5.0 121 124-250 4-126 (175)
25 KOG1909|consensus 99.3 1.7E-12 3.7E-17 117.6 2.0 237 186-443 27-310 (382)
26 KOG1259|consensus 99.3 1.7E-12 3.8E-17 115.1 1.9 136 306-449 281-417 (490)
27 KOG3207|consensus 99.2 2.3E-12 4.9E-17 120.0 1.1 186 260-446 145-341 (505)
28 KOG1909|consensus 99.2 4.7E-12 1E-16 114.8 2.1 162 210-371 89-283 (382)
29 KOG3207|consensus 99.2 1.1E-11 2.4E-16 115.5 2.2 209 162-371 118-339 (505)
30 KOG1259|consensus 99.1 5.1E-12 1.1E-16 112.1 -1.5 137 112-254 279-416 (490)
31 PF13855 LRR_8: Leucine rich r 99.1 3.7E-11 8E-16 84.1 3.1 61 383-443 1-61 (61)
32 PF13855 LRR_8: Leucine rich r 99.1 1.6E-10 3.4E-15 80.9 4.1 61 117-177 1-61 (61)
33 COG4886 Leucine-rich repeat (L 99.0 4.4E-10 9.5E-15 111.4 7.7 199 145-352 97-296 (394)
34 COG4886 Leucine-rich repeat (L 99.0 4.6E-10 1E-14 111.3 6.9 198 216-424 96-294 (394)
35 KOG0532|consensus 99.0 1.9E-11 4.2E-16 117.5 -2.8 175 166-349 76-250 (722)
36 KOG0531|consensus 99.0 5.6E-11 1.2E-15 118.0 -0.3 217 115-344 70-288 (414)
37 KOG4658|consensus 99.0 8.8E-10 1.9E-14 117.0 6.9 128 117-248 523-653 (889)
38 KOG0531|consensus 99.0 1.7E-10 3.6E-15 114.6 1.3 226 112-348 90-320 (414)
39 KOG4658|consensus 98.8 4.1E-09 9E-14 112.0 6.0 204 139-348 521-732 (889)
40 KOG0532|consensus 98.8 2.5E-10 5.5E-15 110.0 -3.0 176 238-424 76-251 (722)
41 PF13306 LRR_5: Leucine rich r 98.8 1.1E-08 2.3E-13 84.1 6.7 122 112-239 7-128 (129)
42 PF13306 LRR_5: Leucine rich r 98.8 2.1E-08 4.5E-13 82.4 7.3 128 131-264 2-129 (129)
43 KOG2120|consensus 98.7 3.1E-10 6.8E-15 100.9 -4.9 179 261-441 185-373 (419)
44 PLN03150 hypothetical protein; 98.6 6.7E-08 1.5E-12 100.6 8.4 106 287-394 420-526 (623)
45 PLN03150 hypothetical protein; 98.6 9.4E-08 2E-12 99.5 8.3 108 142-249 419-527 (623)
46 KOG2982|consensus 98.5 3.2E-08 6.9E-13 88.3 2.2 186 260-445 70-263 (418)
47 KOG4579|consensus 98.4 1.4E-08 3.1E-13 80.0 -2.3 135 334-474 28-165 (177)
48 KOG1859|consensus 98.4 3.1E-09 6.6E-14 105.4 -7.7 197 90-297 84-291 (1096)
49 COG5238 RNA1 Ran GTPase-activa 98.3 2.6E-07 5.7E-12 81.5 2.1 177 258-445 89-286 (388)
50 COG5238 RNA1 Ran GTPase-activa 98.3 1.7E-07 3.7E-12 82.7 0.1 92 331-423 212-319 (388)
51 PF12799 LRR_4: Leucine Rich r 98.2 1E-06 2.2E-11 56.3 3.3 39 408-447 2-40 (44)
52 KOG1644|consensus 98.2 1.9E-06 4.1E-11 73.0 5.4 81 143-225 44-125 (233)
53 KOG2982|consensus 98.2 1.9E-06 4E-11 77.3 4.7 206 188-415 70-287 (418)
54 KOG4579|consensus 98.2 8.8E-08 1.9E-12 75.7 -3.4 113 119-233 29-143 (177)
55 KOG1859|consensus 98.1 3.3E-08 7.1E-13 98.3 -7.8 127 118-250 165-292 (1096)
56 KOG2120|consensus 98.1 1.1E-07 2.5E-12 84.9 -4.0 176 238-417 186-373 (419)
57 PF12799 LRR_4: Leucine Rich r 98.1 3.9E-06 8.5E-11 53.6 3.5 40 383-423 1-40 (44)
58 KOG1644|consensus 98.1 9.5E-06 2.1E-10 68.8 6.3 104 165-270 42-149 (233)
59 PRK15386 type III secretion pr 97.9 7.4E-05 1.6E-09 71.9 9.6 159 233-417 48-210 (426)
60 KOG4341|consensus 97.9 1.3E-06 2.9E-11 81.8 -2.2 112 282-394 317-437 (483)
61 PRK15386 type III secretion pr 97.9 8.4E-05 1.8E-09 71.6 9.5 89 260-366 51-140 (426)
62 KOG4341|consensus 97.8 3.2E-06 6.9E-11 79.3 -1.7 136 307-442 292-437 (483)
63 KOG3665|consensus 97.4 5.8E-05 1.3E-09 78.8 1.7 132 189-322 122-263 (699)
64 KOG2739|consensus 97.3 0.00015 3.3E-09 64.3 3.1 61 116-178 42-104 (260)
65 KOG3665|consensus 97.3 0.00014 3E-09 76.0 3.0 132 309-445 122-264 (699)
66 KOG2123|consensus 97.0 4.3E-05 9.4E-10 68.1 -3.8 101 115-219 17-123 (388)
67 KOG2739|consensus 97.0 0.00039 8.5E-09 61.8 1.9 106 285-393 43-153 (260)
68 KOG2123|consensus 96.8 0.00011 2.5E-09 65.5 -2.5 100 332-437 18-123 (388)
69 KOG1947|consensus 96.6 0.00083 1.8E-08 68.5 1.8 110 235-344 186-306 (482)
70 PF00560 LRR_1: Leucine Rich R 96.6 0.00072 1.6E-08 35.8 0.5 22 10-32 1-22 (22)
71 KOG1947|consensus 96.5 0.00071 1.5E-08 69.0 0.2 126 211-346 241-375 (482)
72 smart00370 LRR Leucine-rich re 95.9 0.0043 9.2E-08 34.4 1.3 23 8-30 1-23 (26)
73 smart00369 LRR_TYP Leucine-ric 95.9 0.0043 9.2E-08 34.4 1.3 23 8-30 1-23 (26)
74 PF13504 LRR_7: Leucine rich r 95.7 0.0061 1.3E-07 29.9 1.2 17 431-447 1-17 (17)
75 PF00560 LRR_1: Leucine Rich R 95.4 0.0065 1.4E-07 32.1 0.8 17 385-401 2-18 (22)
76 smart00370 LRR Leucine-rich re 94.6 0.027 5.9E-07 31.1 1.9 22 383-404 2-23 (26)
77 smart00369 LRR_TYP Leucine-ric 94.6 0.027 5.9E-07 31.1 1.9 22 383-404 2-23 (26)
78 PF13504 LRR_7: Leucine rich r 94.5 0.026 5.7E-07 27.6 1.4 14 385-398 3-16 (17)
79 KOG3864|consensus 94.1 0.012 2.7E-07 50.4 -0.4 84 310-394 102-187 (221)
80 PF13516 LRR_6: Leucine Rich r 93.9 0.019 4.1E-07 31.0 0.3 23 8-30 1-23 (24)
81 KOG4308|consensus 93.1 0.0014 3.1E-08 65.5 -8.9 83 239-321 89-184 (478)
82 KOG3864|consensus 92.6 0.014 3E-07 50.1 -2.4 34 407-440 151-185 (221)
83 KOG4308|consensus 92.0 0.0018 3.9E-08 64.8 -9.9 134 260-394 171-329 (478)
84 smart00365 LRR_SD22 Leucine-ri 91.9 0.094 2E-06 28.9 1.2 19 8-26 1-19 (26)
85 smart00364 LRR_BAC Leucine-ric 89.6 0.25 5.4E-06 27.1 1.5 19 431-449 2-20 (26)
86 KOG0473|consensus 88.7 0.0081 1.7E-07 52.6 -7.2 91 131-224 32-122 (326)
87 smart00368 LRR_RI Leucine rich 85.0 0.39 8.6E-06 27.0 0.7 19 9-27 2-20 (28)
88 TIGR00864 PCC polycystin catio 84.5 0.32 6.9E-06 57.6 0.2 39 413-451 1-39 (2740)
89 KOG0473|consensus 79.3 0.047 1E-06 48.0 -6.7 93 323-420 32-124 (326)
90 KOG3763|consensus 66.0 3.1 6.8E-05 41.7 1.4 80 308-389 217-307 (585)
91 KOG3763|consensus 64.2 2 4.3E-05 43.1 -0.4 62 360-421 220-284 (585)
92 smart00013 LRRNT Leucine rich 63.8 13 0.00028 21.7 3.2 24 55-83 1-24 (33)
93 smart00367 LRR_CC Leucine-rich 63.4 3.3 7.3E-05 22.6 0.6 17 8-24 1-18 (26)
94 PF01462 LRRNT: Leucine rich r 61.7 9.3 0.0002 21.4 2.2 24 55-83 1-24 (28)
95 TIGR00864 PCC polycystin catio 42.3 16 0.00035 44.4 2.2 29 390-418 2-30 (2740)
96 KOG4242|consensus 30.8 4.3E+02 0.0093 26.8 9.3 14 407-420 440-453 (553)
97 TIGR02167 Liste_lipo_26 bacter 23.2 35 0.00076 18.7 0.4 14 5-18 2-15 (26)
No 1
>KOG4194|consensus
Probab=100.00 E-value=9.3e-46 Score=349.30 Aligned_cols=418 Identities=24% Similarity=0.323 Sum_probs=368.9
Q ss_pred cCCCCCCCceeccCCCCcEEEEecCCCCCCCC--C-CCCCCCCCceEEeecCCCCCCccccCccccCCCCCcEEEccCCC
Q psy10289 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPI--P-IGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSF 128 (497)
Q Consensus 52 ~~~~~p~~~~c~~~~~~~~~~~c~~~~~~~~~--~-~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 128 (497)
....||+.|.|... .++|....+..+. . ...+|.....|+++.+. ..-.-...|.++++|+++++.+|.
T Consensus 42 ~~~~cpa~c~c~~~-----lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNk---l~~id~~~f~nl~nLq~v~l~~N~ 113 (873)
T KOG4194|consen 42 DLSECPATCPCNTR-----LLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNK---LSHIDFEFFYNLPNLQEVNLNKNE 113 (873)
T ss_pred ccccCCCcCCCCce-----eeecCccccccccccccCCcCccceeeeeccccc---cccCcHHHHhcCCcceeeeeccch
Confidence 34589999999865 6889988876642 1 13466677889998772 222223468999999999999999
Q ss_pred CCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhh
Q psy10289 129 IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRL 208 (497)
Q Consensus 129 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~ 208 (497)
++.|+. .-....+|+.|+|.+|.|+++....++.++.|+.|||+.|.+..++...|..-.++++|+|++|+|+.+....
T Consensus 114 Lt~IP~-f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~ 192 (873)
T KOG4194|consen 114 LTRIPR-FGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGH 192 (873)
T ss_pred hhhccc-ccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccccccc
Confidence 999973 2234457999999999999999999999999999999999999999888988899999999999999999999
Q ss_pred hcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCCCCCccChhhhcCCccCc
Q psy10289 209 FLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLE 288 (497)
Q Consensus 209 ~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 288 (497)
|.++.+|..|.++.|+++.++...|.++++|+.|++..|.|.-+...+|.++++|+.|.+..|.+.....++|..+.+++
T Consensus 193 F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme 272 (873)
T KOG4194|consen 193 FDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKME 272 (873)
T ss_pred ccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccc
Confidence 99999999999999999999999999999999999999999988888999999999999999999998889999999999
Q ss_pred eeeccCCcCCCcCccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCC
Q psy10289 289 TLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368 (497)
Q Consensus 289 ~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n 368 (497)
+|++..|++..+....+-+++.|+.|++++|.|..+..+.|..+++|++|+++.|+++.++++.|..+.. |++|+|++|
T Consensus 273 ~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~-Le~LnLs~N 351 (873)
T KOG4194|consen 273 HLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQ-LEELNLSHN 351 (873)
T ss_pred eeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHH-hhhhccccc
Confidence 9999999999988888899999999999999999999999999999999999999999999999999987 999999999
Q ss_pred cCCCcchhhHhhcCCCCCEEecCCCcCC---cCCcccccCCCcCcEEeCcCCCCcccchhhhccCCCCCEEECCCCcccc
Q psy10289 369 NIQLSDVKNVLDKLVKLKALSIADMNYT---DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKG 445 (497)
Q Consensus 369 ~i~~~~~~~~~~~~~~L~~L~l~~n~i~---~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 445 (497)
.++.. -...|..+++|+.||++.|.+. +-....|.++++|+.|.+.+|++..++..+|.+++.|++|||.+|.|.+
T Consensus 352 si~~l-~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaS 430 (873)
T KOG4194|consen 352 SIDHL-AEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIAS 430 (873)
T ss_pred chHHH-HhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCccee
Confidence 98732 2356788999999999999876 2245668999999999999999999999999999999999999999999
Q ss_pred ccCCCcccCCchhHHHHhhhhhHhhhhccCCCceEE
Q psy10289 446 FDEKSYIMSEPKNIHKAAKNSFALQSSMGKNAEYAV 481 (497)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 481 (497)
|-+..|....++++ -+.-..|-|+|.+.|.+.|.+
T Consensus 431 Iq~nAFe~m~Lk~L-v~nSssflCDCql~Wl~qWl~ 465 (873)
T KOG4194|consen 431 IQPNAFEPMELKEL-VMNSSSFLCDCQLKWLAQWLY 465 (873)
T ss_pred ecccccccchhhhh-hhcccceEEeccHHHHHHHHH
Confidence 99988887766665 344556779999999888854
No 2
>KOG4194|consensus
Probab=100.00 E-value=1.3e-44 Score=341.68 Aligned_cols=366 Identities=27% Similarity=0.409 Sum_probs=315.3
Q ss_pred cceecCCCCcccccCchhhhhhHHHHHHHHHHHHHHHhccccCCCCCCCceeccCCCCcEEEEecCCCCCCCCCCCCCCC
Q psy10289 11 LKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDL 90 (497)
Q Consensus 11 L~~Ldls~n~i~~i~~~~f~~l~~L~~l~~~~~~~~~~~~~~~~~~p~~~~c~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 90 (497)
-++||+|+|.+.+++...|.++++|+.+. ...+.+..+
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~----------------------------------l~~N~Lt~I-------- 117 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVN----------------------------------LNKNELTRI-------- 117 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeee----------------------------------eccchhhhc--------
Confidence 35799999999999999999999988652 112222222
Q ss_pred CCceEEeecCCCCCCccccCccccC-CCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcE
Q psy10289 91 GTEVLKIVPSEENPNHLTIGPIFQQ-FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169 (497)
Q Consensus 91 ~~~~l~l~~~~~~~~~~~~~~~~~~-~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 169 (497)
+.|.+ ..+++.|+|.+|.|+++...+++.++.|+.||||.|.|+.++...|..-.++++
T Consensus 118 --------------------P~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~ 177 (873)
T KOG4194|consen 118 --------------------PRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKK 177 (873)
T ss_pred --------------------ccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceE
Confidence 23333 346888999999888888888888888999999999998888888887788999
Q ss_pred EeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCC
Q psy10289 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGL 249 (497)
Q Consensus 170 L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l 249 (497)
|+|++|.|+.+..+.|..+.+|..|.|+.|+++.+++..|.++++|+.|++..|+|..+..-.|.++++|+.|.+..|++
T Consensus 178 L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I 257 (873)
T KOG4194|consen 178 LNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDI 257 (873)
T ss_pred EeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCc
Confidence 99999999988888888888999999999999998888888899999999999988877777888999999999999999
Q ss_pred cccCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccccccccc
Q psy10289 250 ENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAF 329 (497)
Q Consensus 250 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 329 (497)
..+....|..+.++++|+++.|+++....+++.+++.|+.|+++.|.|..+.++.+..+++|++|+|++|+++..+++.|
T Consensus 258 ~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf 337 (873)
T KOG4194|consen 258 SKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSF 337 (873)
T ss_pred ccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHH
Confidence 99888889999999999999999988888888899999999999999998888888889999999999999999999889
Q ss_pred cCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCC--CcchhhHhhcCCCCCEEecCCCcCCcCCcccccCCC
Q psy10289 330 TNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ--LSDVKNVLDKLVKLKALSIADMNYTDIPKGLFKMNP 407 (497)
Q Consensus 330 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~--~~~~~~~~~~~~~L~~L~l~~n~i~~l~~~~~~~~~ 407 (497)
..+..|++|++++|.+..+...+|..+.+ |+.|||++|.+. .++-...|..+++|+.|++.+|++..||..+|.+++
T Consensus 338 ~~L~~Le~LnLs~Nsi~~l~e~af~~lss-L~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~ 416 (873)
T KOG4194|consen 338 RVLSQLEELNLSHNSIDHLAEGAFVGLSS-LHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLE 416 (873)
T ss_pred HHHHHhhhhcccccchHHHHhhHHHHhhh-hhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCc
Confidence 99999999999999999988888888876 999999999864 334556788899999999999999999999999999
Q ss_pred cCcEEeCcCCCCcccchhhhccCCCCCEEECCC
Q psy10289 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSR 440 (497)
Q Consensus 408 ~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~ 440 (497)
+|+.|+|.+|.|..+.+.+|..+ .|++|.+..
T Consensus 417 ~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 417 ALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred ccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 99999999999999999999988 888887754
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-40 Score=366.12 Aligned_cols=350 Identities=19% Similarity=0.203 Sum_probs=189.2
Q ss_pred CCceEEeecCCCCCCccccCccccCCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEE
Q psy10289 91 GTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170 (497)
Q Consensus 91 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 170 (497)
.++.+++..+ .....++..+.++++|++|++++|.++...+..|.++++|++|++++|++.+..+..+.++++|++|
T Consensus 213 ~L~~L~L~~n---~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 289 (968)
T PLN00113 213 SLKWIYLGYN---NLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISL 289 (968)
T ss_pred CccEEECcCC---ccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEE
Confidence 4455555444 1222344455666666666666666554444555666666666666666655555555566666666
Q ss_pred eccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCc
Q psy10289 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLE 250 (497)
Q Consensus 171 ~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~ 250 (497)
++++|.+....+..+.++++|++|++++|.+.+..+..+..+++|+.|++++|.+.+..+..++.+++|+.|++++|.+.
T Consensus 290 ~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~ 369 (968)
T PLN00113 290 DLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT 369 (968)
T ss_pred ECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeE
Confidence 66666655444444555666666666666665555555566666666666666665544555555666666666666655
Q ss_pred ccCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCccccccccccc
Q psy10289 251 NINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFT 330 (497)
Q Consensus 251 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 330 (497)
+..+..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+..++.|+.|++++|.+.+..+..+.
T Consensus 370 ~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 449 (968)
T PLN00113 370 GEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKW 449 (968)
T ss_pred eeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhc
Confidence 44444444455555555555555555555555555566666655555555555555555555555555555544444344
Q ss_pred CCCCCCEEECcCCC-----------------------CCccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCE
Q psy10289 331 NLTNLIELDISYNK-----------------------LDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKA 387 (497)
Q Consensus 331 ~~~~L~~L~l~~n~-----------------------l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~ 387 (497)
.+++|++|++++|. +.+..+..+..++. |+.|++++|.+. ..+|..+..+++|+.
T Consensus 450 ~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~-~~~p~~~~~l~~L~~ 527 (968)
T PLN00113 450 DMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSE-LMQLKLSENKLS-GEIPDELSSCKKLVS 527 (968)
T ss_pred cCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhc-cCEEECcCCcce-eeCChHHcCccCCCE
Confidence 44444444444444 44333333444433 455555555443 233444455555555
Q ss_pred EecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccchhhhccCCCCCEEECCCCcccc
Q psy10289 388 LSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKG 445 (497)
Q Consensus 388 L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 445 (497)
|++++|.++...+..|..+++|+.|++++|++++..|..+..+++|+++++++|++++
T Consensus 528 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 528 LDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred EECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 5555555544333344555555555555555555444445555555555555555554
No 4
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1e-40 Score=366.84 Aligned_cols=452 Identities=21% Similarity=0.236 Sum_probs=246.4
Q ss_pred eeeccccceecCCCCccc-ccCchhhhhhHHHHHHHHHHHHHHHhccccCCCCCCCceeccCCCCcEEEEecCCCCCCC-
Q psy10289 5 LIFMSKLKSLDLSYNDIV-EINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANP- 82 (497)
Q Consensus 5 ~~~~~~L~~Ldls~n~i~-~i~~~~f~~l~~L~~l~~~~~~~~~~~~~~~~~~p~~~~c~~~~~~~~~~~c~~~~~~~~- 82 (497)
|..+++|++|||++|.+. .++...|..+++|++|+ +..+...+..|... .. ....++.....+...
T Consensus 89 ~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~-------Ls~n~l~~~~p~~~---l~--~L~~L~Ls~n~~~~~~ 156 (968)
T PLN00113 89 IFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLN-------LSNNNFTGSIPRGS---IP--NLETLDLSNNMLSGEI 156 (968)
T ss_pred HhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEE-------CcCCccccccCccc---cC--CCCEEECcCCcccccC
Confidence 456777888888888776 56666677777777764 11121112222211 00 111122222222111
Q ss_pred CC-CCCCCCCCceEEeecCCCCCCccccCccccCCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCcccc
Q psy10289 83 IP-IGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF 161 (497)
Q Consensus 83 ~~-~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 161 (497)
+. +.. -..++.|+++.+ .....++..+.++++|++|++++|.+....+..+.++++|++|++++|++.+..+..+
T Consensus 157 p~~~~~-l~~L~~L~L~~n---~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l 232 (968)
T PLN00113 157 PNDIGS-FSSLKVLDLGGN---VLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI 232 (968)
T ss_pred ChHHhc-CCCCCEEECccC---cccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhH
Confidence 10 111 124555555544 1122334455556666666666665554444455555566666666665555555555
Q ss_pred CCCCCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccE
Q psy10289 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKT 241 (497)
Q Consensus 162 ~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~ 241 (497)
.++++|++|++++|.+....+..|+++++|++|++++|.+.+..|..+.++++|++|++++|.+.+..+..+.++++|+.
T Consensus 233 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 312 (968)
T PLN00113 233 GGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEI 312 (968)
T ss_pred hcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcE
Confidence 55566666666665555433334555555666666655555444555555555555555555555544555555555555
Q ss_pred EEcCCCCCcccCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCcccc----------------
Q psy10289 242 FKCRSCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEKSF---------------- 305 (497)
Q Consensus 242 L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~---------------- 305 (497)
|++++|.+.+..+..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+
T Consensus 313 L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l 392 (968)
T PLN00113 313 LHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSL 392 (968)
T ss_pred EECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEe
Confidence 5555555555444445555555555555555554445555555555555555555444444333
Q ss_pred --------CCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcchhh
Q psy10289 306 --------SSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSDVKN 377 (497)
Q Consensus 306 --------~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~ 377 (497)
..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+..+..+..++. |+.|++++|.+. +.++.
T Consensus 393 ~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~n~~~-~~~p~ 470 (968)
T PLN00113 393 EGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPS-LQMLSLARNKFF-GGLPD 470 (968)
T ss_pred cccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCC-CcEEECcCceee-eecCc
Confidence 34444444444444444443444444455555555555544444433334443 555555555543 22232
Q ss_pred HhhcCCCCCEEecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccchhhhccCCCCCEEECCCCccccccCCCcc-cCCc
Q psy10289 378 VLDKLVKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI-MSEP 456 (497)
Q Consensus 378 ~~~~~~~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~-~~~~ 456 (497)
.+ ..++|+.|++++|+++...+..|..+++|+.|++++|++.+..+..+.++++|++|++++|++++..+..+. +..+
T Consensus 471 ~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 549 (968)
T PLN00113 471 SF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVL 549 (968)
T ss_pred cc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccC
Confidence 22 335677777777777655445567788888888888888887777888888888888888888875554443 3333
Q ss_pred hhHHHHhhhhhH--hhhhccCC
Q psy10289 457 KNIHKAAKNSFA--LQSSMGKN 476 (497)
Q Consensus 457 ~~~~~~~~n~~~--~~~~~~~~ 476 (497)
+ .+++++|+++ .|..+...
T Consensus 550 ~-~L~Ls~N~l~~~~p~~l~~l 570 (968)
T PLN00113 550 S-QLDLSQNQLSGEIPKNLGNV 570 (968)
T ss_pred C-EEECCCCcccccCChhHhcC
Confidence 3 3478888886 44444443
No 5
>KOG4237|consensus
Probab=99.97 E-value=6.1e-33 Score=251.49 Aligned_cols=386 Identities=23% Similarity=0.299 Sum_probs=277.3
Q ss_pred CCCCCCCceeccCCCCcEEEEecCCCCCCCCCCCCCCCCCceEEeecCCCCCCccccCccccCCCCCcEEEccCCCCCcc
Q psy10289 53 SVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAI 132 (497)
Q Consensus 53 ~~~~p~~~~c~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~ 132 (497)
..+||..|.|.... ...|+|...++..+| ..+|+....+.+..+ ......+.+|+.+++||+|||++|.|+.|
T Consensus 34 ~~~CP~pC~Cs~~~--g~~VdCr~~GL~eVP--~~LP~~tveirLdqN---~I~~iP~~aF~~l~~LRrLdLS~N~Is~I 106 (498)
T KOG4237|consen 34 ASACPAPCTCSDVE--GGIVDCRGKGLTEVP--ANLPPETVEIRLDQN---QISSIPPGAFKTLHRLRRLDLSKNNISFI 106 (498)
T ss_pred cccCCCCcccCCCC--CceEEccCCCcccCc--ccCCCcceEEEeccC---CcccCChhhccchhhhceecccccchhhc
Confidence 56899999999754 347999999999998 689999999999776 33344455999999999999999999999
Q ss_pred CCCCCCCCCCCCEEeccC-CcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcC
Q psy10289 133 GFHPFWGVPSLRYLNLTH-NNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLK 211 (497)
Q Consensus 133 ~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~ 211 (497)
.+++|.++++|..|-+.+ |+|+.++.++|.++..|+-|.+..|++..+..++|..++++..|.+.+|.+..+...+|..
T Consensus 107 ~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~ 186 (498)
T KOG4237|consen 107 APDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQG 186 (498)
T ss_pred ChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccc
Confidence 999999999988877766 9999999999999999999999999999999999999999999999999999887778888
Q ss_pred CCCCCEEeccCCCCC------------ccChhhhcCCccccEEE-------------------------cCCC-CCcccC
Q psy10289 212 LSKLKSLDLSYNDIV------------EINPEIFKDIQELKTFK-------------------------CRSC-GLENIN 253 (497)
Q Consensus 212 l~~L~~L~l~~n~i~------------~~~~~~~~~~~~L~~L~-------------------------l~~~-~l~~~~ 253 (497)
+..++.+.+..|.+. ...+..+++........ .+.+ ....-+
T Consensus 187 l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP 266 (498)
T KOG4237|consen 187 LAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICP 266 (498)
T ss_pred hhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcCh
Confidence 999998888777621 11111122211111111 1122 222234
Q ss_pred cccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccccccccccCCC
Q psy10289 254 PMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLT 333 (497)
Q Consensus 254 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~ 333 (497)
...|..+++|+.|++++|+++.+...+|.+...+++|++..|++..+....|.++..|+.|+|++|+|+.+.+.+|....
T Consensus 267 ~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~ 346 (498)
T KOG4237|consen 267 AKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLF 346 (498)
T ss_pred HHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccc
Confidence 45677888888888888888888888888888888888888888887777888888888888888888888888888888
Q ss_pred CCCEEECcCCCCCccC-cccc--------------cccccCCCEEEcCCCcCCCcc--hhhHh---------hcCCCCCE
Q psy10289 334 NLIELDISYNKLDRLE-VASF--------------DPIENSLRDLKISGNNIQLSD--VKNVL---------DKLVKLKA 387 (497)
Q Consensus 334 ~L~~L~l~~n~l~~~~-~~~~--------------~~~~~~L~~L~ls~n~i~~~~--~~~~~---------~~~~~L~~ 387 (497)
.|..|++-.|.+..-- ..++ ..-|..++.+.++...+.... .++.. ..++-+.+
T Consensus 347 ~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~t 426 (498)
T KOG4237|consen 347 SLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDT 426 (498)
T ss_pred eeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhh
Confidence 8888888887654211 0000 111224566666655443110 01110 11222222
Q ss_pred -EecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccchhhhccCCCCCEEECCCCccccccCCCcc
Q psy10289 388 -LSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI 452 (497)
Q Consensus 388 -L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 452 (497)
...++..++.+|.++- ..-.++++.+|.++.++... ..+| .+|+++|+|+.+....|.
T Consensus 427 VvRcSnk~lk~lp~~iP---~d~telyl~gn~~~~vp~~~---~~~l-~~dls~n~i~~Lsn~tf~ 485 (498)
T KOG4237|consen 427 VVRCSNKLLKLLPRGIP---VDVTELYLDGNAITSVPDEL---LRSL-LLDLSNNRISSLSNYTFS 485 (498)
T ss_pred hHhhcccchhhcCCCCC---chhHHHhcccchhcccCHHH---Hhhh-hcccccCceehhhccccc
Confidence 2234444555555441 34567778888888777663 4556 778888888877766554
No 6
>KOG0472|consensus
Probab=99.97 E-value=4.5e-34 Score=259.26 Aligned_cols=354 Identities=24% Similarity=0.272 Sum_probs=228.8
Q ss_pred cCccccCCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCC
Q psy10289 109 IGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188 (497)
Q Consensus 109 ~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l 188 (497)
++..+.....++.++.++|.+.++++ .+..+..|..++..+|++.+.+ ..+.++.+|..+++.+|.++..|++... +
T Consensus 106 lp~~i~s~~~l~~l~~s~n~~~el~~-~i~~~~~l~dl~~~~N~i~slp-~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m 182 (565)
T KOG0472|consen 106 LPEQIGSLISLVKLDCSSNELKELPD-SIGRLLDLEDLDATNNQISSLP-EDMVNLSKLSKLDLEGNKLKALPENHIA-M 182 (565)
T ss_pred ccHHHhhhhhhhhhhccccceeecCc-hHHHHhhhhhhhccccccccCc-hHHHHHHHHHHhhccccchhhCCHHHHH-H
Confidence 34455555666666666666555543 3445555666666666665553 3455555666666666666666655443 6
Q ss_pred cCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEc
Q psy10289 189 SDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268 (497)
Q Consensus 189 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l 268 (497)
..|++|+...|-++.+ |..++.+.+|+.|++..|++..+| .|.++..|+.+.++.|.++-++.....+++++..||+
T Consensus 183 ~~L~~ld~~~N~L~tl-P~~lg~l~~L~~LyL~~Nki~~lP--ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDL 259 (565)
T KOG0472|consen 183 KRLKHLDCNSNLLETL-PPELGGLESLELLYLRRNKIRFLP--EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDL 259 (565)
T ss_pred HHHHhcccchhhhhcC-ChhhcchhhhHHHHhhhcccccCC--CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeec
Confidence 6666666666666666 444666666666667777666665 3666777777777777777666666667778888888
Q ss_pred cCCCCCccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccccc-----------------------
Q psy10289 269 GYNQLKYLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT----------------------- 325 (497)
Q Consensus 269 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~----------------------- 325 (497)
.+|++++. |+.+.-+.+|+.|++++|.+++. |.+++++ .|+.|.+.+|.+..+-
T Consensus 260 RdNklke~-Pde~clLrsL~rLDlSNN~is~L-p~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dg 336 (565)
T KOG0472|consen 260 RDNKLKEV-PDEICLLRSLERLDLSNNDISSL-PYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDG 336 (565)
T ss_pred cccccccC-chHHHHhhhhhhhcccCCccccC-Ccccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCC
Confidence 88887763 55666777788888888877764 4466776 7777777777663220
Q ss_pred ---------------c---ccccCCCCCCEEECcCCCCCccCcccccccccC-CCEEEcCCCcCCC--------------
Q psy10289 326 ---------------T---TAFTNLTNLIELDISYNKLDRLEVASFDPIENS-LRDLKISGNNIQL-------------- 372 (497)
Q Consensus 326 ---------------~---~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~-L~~L~ls~n~i~~-------------- 372 (497)
+ .....+.+.+.|++++-+++.++.+.|....+. ...+++++|++..
T Consensus 337 lS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~ 416 (565)
T KOG0472|consen 337 LSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTD 416 (565)
T ss_pred CCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHH
Confidence 0 001123455666777666666666655543321 3345555554320
Q ss_pred --------cchhhHhhcCCCCCEEecCCCcCCcCCcccccCCCcCcEEeCcCCC-----------------------Ccc
Q psy10289 373 --------SDVKNVLDKLVKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNN-----------------------LQD 421 (497)
Q Consensus 373 --------~~~~~~~~~~~~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~-----------------------l~~ 421 (497)
.-++..+..+++|..|++++|-+.++|... +.+..|+.|+++.|+ +..
T Consensus 417 l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP~e~-~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~ 495 (565)
T KOG0472|consen 417 LVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDLPEEM-GSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGS 495 (565)
T ss_pred HHhhcCccccchHHHHhhhcceeeecccchhhhcchhh-hhhhhhheecccccccccchHHHhhHHHHHHHHhccccccc
Confidence 012344556677777777777777777664 334557777776654 445
Q ss_pred cchhhhccCCCCCEEECCCCccccccCCCcccCCchhHHHHhhhhhHhhhhc
Q psy10289 422 IHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAAKNSFALQSSM 473 (497)
Q Consensus 422 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 473 (497)
++++.+.++.+|.+||+.+|.+..||+....++.++.+ ++.+|||+.|...
T Consensus 496 vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hL-eL~gNpfr~Pr~~ 546 (565)
T KOG0472|consen 496 VDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHL-ELDGNPFRQPRHQ 546 (565)
T ss_pred cChHHhhhhhhcceeccCCCchhhCChhhccccceeEE-EecCCccCCCHHH
Confidence 55566778999999999999999999999999988877 8999999966544
No 7
>KOG0472|consensus
Probab=99.97 E-value=7.5e-33 Score=251.33 Aligned_cols=410 Identities=23% Similarity=0.305 Sum_probs=299.1
Q ss_pred eeeccccceecCCCCcccccCchhhhhhHHHHHHHHHHHHHHHhccccCCCCCCCceeccCCCCcEEEEecCCCCCCCCC
Q psy10289 5 LIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIP 84 (497)
Q Consensus 5 ~~~~~~L~~Ldls~n~i~~i~~~~f~~l~~L~~l~~~~~~~~~~~~~~~~~~p~~~~c~~~~~~~~~~~c~~~~~~~~~~ 84 (497)
+.++..|.+|++++|.....+ .+.+.+..++.++... +.....|.. ..+
T Consensus 64 l~nL~~l~vl~~~~n~l~~lp-~aig~l~~l~~l~vs~--------n~ls~lp~~-------------------i~s--- 112 (565)
T KOG0472|consen 64 LKNLACLTVLNVHDNKLSQLP-AAIGELEALKSLNVSH--------NKLSELPEQ-------------------IGS--- 112 (565)
T ss_pred hhcccceeEEEeccchhhhCC-HHHHHHHHHHHhhccc--------chHhhccHH-------------------Hhh---
Confidence 456788889999999988874 4666777776664111 111111210 000
Q ss_pred CCCCCCCCceEEeecCCCCCCccccCccccCCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCC
Q psy10289 85 IGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGM 164 (497)
Q Consensus 85 ~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 164 (497)
...+..++.+.+ .....++.+..+-.++.++-.+|+++..+. .+..+.+|..+++.+|+++..++..+. +
T Consensus 113 ----~~~l~~l~~s~n----~~~el~~~i~~~~~l~dl~~~~N~i~slp~-~~~~~~~l~~l~~~~n~l~~l~~~~i~-m 182 (565)
T KOG0472|consen 113 ----LISLVKLDCSSN----ELKELPDSIGRLLDLEDLDATNNQISSLPE-DMVNLSKLSKLDLEGNKLKALPENHIA-M 182 (565)
T ss_pred ----hhhhhhhhcccc----ceeecCchHHHHhhhhhhhccccccccCch-HHHHHHHHHHhhccccchhhCCHHHHH-H
Confidence 012222222222 233455678899999999999999999864 566888999999999999999877666 9
Q ss_pred CCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEc
Q psy10289 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKC 244 (497)
Q Consensus 165 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l 244 (497)
+.|+++|...|.+..+|++ ++.+.+|.-|++.+|++..+ | .|.+|..|.++.++.|.|..++.+....++.+.+|++
T Consensus 183 ~~L~~ld~~~N~L~tlP~~-lg~l~~L~~LyL~~Nki~~l-P-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDL 259 (565)
T KOG0472|consen 183 KRLKHLDCNSNLLETLPPE-LGGLESLELLYLRRNKIRFL-P-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDL 259 (565)
T ss_pred HHHHhcccchhhhhcCChh-hcchhhhHHHHhhhcccccC-C-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeec
Confidence 9999999999999999987 58999999999999999988 4 6999999999999999999999998889999999999
Q ss_pred CCCCCcccCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcC-----------------------
Q psy10289 245 RSCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVIL----------------------- 301 (497)
Q Consensus 245 ~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~----------------------- 301 (497)
+.|+++.+|.... -+.+|..||+++|.+++. |..++++ .|+.|.+.||.+..+-
T Consensus 260 RdNklke~Pde~c-lLrsL~rLDlSNN~is~L-p~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dg 336 (565)
T KOG0472|consen 260 RDNKLKEVPDEIC-LLRSLERLDLSNNDISSL-PYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDG 336 (565)
T ss_pred cccccccCchHHH-HhhhhhhhcccCCccccC-Ccccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCC
Confidence 9999999877654 488999999999999975 5678888 8999999998753320
Q ss_pred ---------------ccccC---CCCCcc--------------------------EEEccCCcccccc------------
Q psy10289 302 ---------------EKSFS---SQFKLQ--------------------------VLCLKRNRLAKVT------------ 325 (497)
Q Consensus 302 ---------------~~~~~---~~~~L~--------------------------~L~l~~n~l~~~~------------ 325 (497)
+..|. ...+.+ ..+++.|++.+++
T Consensus 337 lS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~ 416 (565)
T KOG0472|consen 337 LSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTD 416 (565)
T ss_pred CCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHH
Confidence 00000 011233 4444444443222
Q ss_pred -----------cccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCc
Q psy10289 326 -----------TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMN 394 (497)
Q Consensus 326 -----------~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~ 394 (497)
+..++.+++|..|++++|.+.+++.+.+ .+.. |+.++++.|.+. ..|..+..+..++.+-.++|+
T Consensus 417 l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP~e~~-~lv~-Lq~LnlS~NrFr--~lP~~~y~lq~lEtllas~nq 492 (565)
T KOG0472|consen 417 LVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDLPEEMG-SLVR-LQTLNLSFNRFR--MLPECLYELQTLETLLASNNQ 492 (565)
T ss_pred HHhhcCccccchHHHHhhhcceeeecccchhhhcchhhh-hhhh-hheecccccccc--cchHHHhhHHHHHHHHhcccc
Confidence 1223445566666666666666554433 2333 666677666554 456666555566666666677
Q ss_pred CCcCCcccccCCCcCcEEeCcCCCCcccchhhhccCCCCCEEECCCCccccccCCCcccCCchhHHHHhhhhh
Q psy10289 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAAKNSF 467 (497)
Q Consensus 395 i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~n~~ 467 (497)
+.++++.-..++.+|..||+.+|.+..+++. +++|.+|++|+++||+++ .|+....+.+...++...++++
T Consensus 493 i~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~-LgnmtnL~hLeL~gNpfr-~Pr~~iLmkgT~aiL~ylrdrI 563 (565)
T KOG0472|consen 493 IGSVDPSGLKNMRNLTTLDLQNNDLQQIPPI-LGNMTNLRHLELDGNPFR-QPRHQILMKGTAAILSYLRDRI 563 (565)
T ss_pred ccccChHHhhhhhhcceeccCCCchhhCChh-hccccceeEEEecCCccC-CCHHHHhccChHHHHHHhcccC
Confidence 7777766567889999999999999999875 799999999999999999 7887777777777777777664
No 8
>KOG0444|consensus
Probab=99.96 E-value=1.6e-32 Score=262.00 Aligned_cols=345 Identities=23% Similarity=0.342 Sum_probs=222.3
Q ss_pred cCccccCCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCc--cCCccccc
Q psy10289 109 IGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE--SIPSSVFM 186 (497)
Q Consensus 109 ~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~--~~~~~~~~ 186 (497)
.|.....+++++.|.+...++..++ ..++.+.+|++|.+++|++..+. +.+..++.|+.+++..|+++ .||+++|
T Consensus 24 FP~~v~qMt~~~WLkLnrt~L~~vP-eEL~~lqkLEHLs~~HN~L~~vh-GELs~Lp~LRsv~~R~N~LKnsGiP~diF- 100 (1255)
T KOG0444|consen 24 FPHDVEQMTQMTWLKLNRTKLEQVP-EELSRLQKLEHLSMAHNQLISVH-GELSDLPRLRSVIVRDNNLKNSGIPTDIF- 100 (1255)
T ss_pred CchhHHHhhheeEEEechhhhhhCh-HHHHHHhhhhhhhhhhhhhHhhh-hhhccchhhHHHhhhccccccCCCCchhc-
Confidence 4445566667777777666666664 45566667777777777766653 34566677777777777665 5666665
Q ss_pred CCcCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEE
Q psy10289 187 HLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266 (497)
Q Consensus 187 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L 266 (497)
.+..|..|++++|++... |..+...+++-.|++++|+|..||...|.++..|-.|++++|.+..+||.. ..+..|++|
T Consensus 101 ~l~dLt~lDLShNqL~Ev-P~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~-RRL~~LqtL 178 (1255)
T KOG0444|consen 101 RLKDLTILDLSHNQLREV-PTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQI-RRLSMLQTL 178 (1255)
T ss_pred ccccceeeecchhhhhhc-chhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHH-HHHhhhhhh
Confidence 566777777777777665 555666666777777777777777666777777777777777777666643 446667777
Q ss_pred EccCCCCCccChhhhcCCccCceeeccCCcCC-CcCccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCC
Q psy10289 267 DLGYNQLKYLLADELEDLKKLETLLLDGNHFP-VILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345 (497)
Q Consensus 267 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l 345 (497)
++++|.+.......+..+++|++|.+++.+-+ .-.|.++..+.+|..+|++.|.+..+ |+++..+++|+.|++++|++
T Consensus 179 ~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~v-Pecly~l~~LrrLNLS~N~i 257 (1255)
T KOG0444|consen 179 KLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIV-PECLYKLRNLRRLNLSGNKI 257 (1255)
T ss_pred hcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcc-hHHHhhhhhhheeccCcCce
Confidence 77777666544444555666666666665422 23455666667777777777776544 34566677777777777777
Q ss_pred CccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCC--cCCcccccCCCcCcEEeCcCCCCcccc
Q psy10289 346 DRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYT--DIPKGLFKMNPHLQFLNLSGNNLQDIH 423 (497)
Q Consensus 346 ~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~--~l~~~~~~~~~~L~~L~Ls~n~l~~~~ 423 (497)
+.+... ...+.+ |++|++|.|+++ .+|..+..+++|+.|++.+|+++ .||.++ +.+.+|+++..++|.+.-++
T Consensus 258 teL~~~-~~~W~~-lEtLNlSrNQLt--~LP~avcKL~kL~kLy~n~NkL~FeGiPSGI-GKL~~Levf~aanN~LElVP 332 (1255)
T KOG0444|consen 258 TELNMT-EGEWEN-LETLNLSRNQLT--VLPDAVCKLTKLTKLYANNNKLTFEGIPSGI-GKLIQLEVFHAANNKLELVP 332 (1255)
T ss_pred eeeecc-HHHHhh-hhhhccccchhc--cchHHHhhhHHHHHHHhccCcccccCCccch-hhhhhhHHHHhhccccccCc
Confidence 665422 222333 677777777666 55667777777777777777544 666664 66677777777766655443
Q ss_pred hhhhccCCCCCEEECCCCccccccCCCcccCCchhHHHHhhhh
Q psy10289 424 NLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAAKNS 466 (497)
Q Consensus 424 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~n~ 466 (497)
..++.|+.|+.|.++.|.+-++|+.+-.+..+..+ ++..||
T Consensus 333 -EglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vL-DlreNp 373 (1255)
T KOG0444|consen 333 -EGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVL-DLRENP 373 (1255)
T ss_pred -hhhhhhHHHHHhcccccceeechhhhhhcCCccee-eccCCc
Confidence 34666777777777777777777766665554433 555554
No 9
>KOG0444|consensus
Probab=99.96 E-value=5.3e-31 Score=251.60 Aligned_cols=331 Identities=23% Similarity=0.329 Sum_probs=280.5
Q ss_pred cCccccCCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCc--cCCccccCCCCCCcEEeccCCCCccCCccccc
Q psy10289 109 IGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNIT--SLLDYNFKGMMNLQELYLDFNKIESIPSSVFM 186 (497)
Q Consensus 109 ~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~ 186 (497)
+|..++++.+|++|.+++|++..+. +.+..++.||.+++..|++. +++++ +..+..|+.|||++|+++.+|.. +.
T Consensus 47 vPeEL~~lqkLEHLs~~HN~L~~vh-GELs~Lp~LRsv~~R~N~LKnsGiP~d-iF~l~dLt~lDLShNqL~EvP~~-LE 123 (1255)
T KOG0444|consen 47 VPEELSRLQKLEHLSMAHNQLISVH-GELSDLPRLRSVIVRDNNLKNSGIPTD-IFRLKDLTILDLSHNQLREVPTN-LE 123 (1255)
T ss_pred ChHHHHHHhhhhhhhhhhhhhHhhh-hhhccchhhHHHhhhccccccCCCCch-hcccccceeeecchhhhhhcchh-hh
Confidence 4557888999999999999988875 56788999999999999885 56544 55788999999999999999876 57
Q ss_pred CCcCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEE
Q psy10289 187 HLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266 (497)
Q Consensus 187 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L 266 (497)
.-.++-+|++++|+|..++...|.+++.|-+||+++|++..+||. ...+..|++|.+++|.+....-..+..+++|+.|
T Consensus 124 ~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ-~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vL 202 (1255)
T KOG0444|consen 124 YAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQ-IRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVL 202 (1255)
T ss_pred hhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHH-HHHHhhhhhhhcCCChhhHHHHhcCccchhhhhh
Confidence 778999999999999999778888999999999999999999887 5678899999999999887666666678899999
Q ss_pred EccCCCCC-ccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCC
Q psy10289 267 DLGYNQLK-YLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345 (497)
Q Consensus 267 ~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l 345 (497)
.+++.+-+ .-.|.++..+.+|..++++.|.+.. .|+.+..+++|+.|+|++|+|+.+... .....+|+.|++++|++
T Consensus 203 hms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~-vPecly~l~~LrrLNLS~N~iteL~~~-~~~W~~lEtLNlSrNQL 280 (1255)
T KOG0444|consen 203 HMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPI-VPECLYKLRNLRRLNLSGNKITELNMT-EGEWENLETLNLSRNQL 280 (1255)
T ss_pred hcccccchhhcCCCchhhhhhhhhccccccCCCc-chHHHhhhhhhheeccCcCceeeeecc-HHHHhhhhhhccccchh
Confidence 99988655 4567788899999999999998876 566778889999999999999877542 45567899999999999
Q ss_pred CccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccchh
Q psy10289 346 DRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNL 425 (497)
Q Consensus 346 ~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~ 425 (497)
+.++ .++..++. |+.|.+.+|+++...+|..++.+.+|+.+..++|.+.-+|.++ ..|+.|+.|.|+.|++-.++.
T Consensus 281 t~LP-~avcKL~k-L~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LElVPEgl-cRC~kL~kL~L~~NrLiTLPe- 356 (1255)
T KOG0444|consen 281 TVLP-DAVCKLTK-LTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLELVPEGL-CRCVKLQKLKLDHNRLITLPE- 356 (1255)
T ss_pred ccch-HHHhhhHH-HHHHHhccCcccccCCccchhhhhhhHHHHhhccccccCchhh-hhhHHHHHhcccccceeechh-
Confidence 9874 56677777 9999999999999999999999999999999999998889885 778999999999999888764
Q ss_pred hhccCCCCCEEECCCCccccccCC
Q psy10289 426 LYQSNIKLTHLDLSRNKFKGFDEK 449 (497)
Q Consensus 426 ~~~~~~~L~~L~l~~n~l~~~~~~ 449 (497)
++--++.|+.||+..|+=--.|+.
T Consensus 357 aIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 357 AIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred hhhhcCCcceeeccCCcCccCCCC
Confidence 466689999999999865555554
No 10
>KOG4237|consensus
Probab=99.92 E-value=1.1e-27 Score=217.53 Aligned_cols=322 Identities=22% Similarity=0.228 Sum_probs=237.1
Q ss_pred EeccCCcCccCCccccCCC-CCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEeccC-C
Q psy10289 146 LNLTHNNITSLLDYNFKGM-MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSY-N 223 (497)
Q Consensus 146 L~l~~n~l~~~~~~~~~~l-~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~-n 223 (497)
.+-++-.++.++. ++ +.-+.+.|..|.|+.||+.+|+.+++|+.|+|++|.|+.+.|.+|.+++.|..|.+.+ |
T Consensus 51 VdCr~~GL~eVP~----~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 51 VDCRGKGLTEVPA----NLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred EEccCCCcccCcc----cCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 3444445665543 33 3677889999999999999999999999999999999999999999999888776655 8
Q ss_pred CCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCcc
Q psy10289 224 DIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEK 303 (497)
Q Consensus 224 ~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 303 (497)
+|++++...|+++..++.|.+.-|.+..+...+|..++++..|.+.+|.+..+....|..+..++.+.+..|.....
T Consensus 127 kI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icd--- 203 (498)
T KOG4237|consen 127 KITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICD--- 203 (498)
T ss_pred chhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccc---
Confidence 89999999999999999999988888888888888888888888888888776666788888888887776653221
Q ss_pred ccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCC
Q psy10289 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLV 383 (497)
Q Consensus 304 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~ 383 (497)
.+++.+.. +....+..++...-..-..+.+.++..+....|.....++..=-.+.+..........|..++
T Consensus 204 --CnL~wla~-------~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~ 274 (498)
T KOG4237|consen 204 --CNLPWLAD-------DLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLP 274 (498)
T ss_pred --cccchhhh-------HHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcc
Confidence 11111111 001111123333333333444445555544444332111211111222222122235688999
Q ss_pred CCCEEecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccchhhhccCCCCCEEECCCCccccccCCCcccCCchhHHHHh
Q psy10289 384 KLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAA 463 (497)
Q Consensus 384 ~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~ 463 (497)
+|+.|++++|+|+.|.+++|++...+++|.|..|++..+...+|.++..|+.|++.+|+|+.+.+..|.......-+.+-
T Consensus 275 ~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~ 354 (498)
T KOG4237|consen 275 NLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLL 354 (498)
T ss_pred cceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehc
Confidence 99999999999999999999999999999999999999999999999999999999999999988877644444446899
Q ss_pred hhhhHhhhhccCCCceEEEe
Q psy10289 464 KNSFALQSSMGKNAEYAVFI 483 (497)
Q Consensus 464 ~n~~~~~~~~~~~~~~~~~~ 483 (497)
.|||-|+|.+.|..+|...-
T Consensus 355 ~Np~~CnC~l~wl~~Wlr~~ 374 (498)
T KOG4237|consen 355 SNPFNCNCRLAWLGEWLRKK 374 (498)
T ss_pred cCcccCccchHHHHHHHhhC
Confidence 99999999999988886543
No 11
>KOG0618|consensus
Probab=99.92 E-value=3e-27 Score=235.70 Aligned_cols=269 Identities=27% Similarity=0.375 Sum_probs=161.7
Q ss_pred CCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEc
Q psy10289 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKC 244 (497)
Q Consensus 165 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l 244 (497)
++|+.|+.++|.++.+... ..-.+|+++++++|+++.+ |..+..+.+|+.++...|.+..++.+ +..+.+|+.+.+
T Consensus 219 ~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~l-p~wi~~~~nle~l~~n~N~l~~lp~r-i~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLSNL-PEWIGACANLEALNANHNRLVALPLR-ISRITSLVSLSA 294 (1081)
T ss_pred cchheeeeccCcceeeccc--cccccceeeecchhhhhcc-hHHHHhcccceEecccchhHHhhHHH-HhhhhhHHHHHh
Confidence 3455555555555533221 1234667777777777666 36666777777777777777666444 334566777777
Q ss_pred CCCCCcccCcccccCCCCccEEEccCCCCCccChhhhcCCcc-CceeeccCCcCCCcCccccCCCCCccEEEccCCcccc
Q psy10289 245 RSCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKK-LETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAK 323 (497)
Q Consensus 245 ~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 323 (497)
..|.+..+++. ....+.|++|++..|.+...+...+.-... ++.+..+.+.+.......=...+.|+.|.+.+|.++.
T Consensus 295 ~~nel~yip~~-le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd 373 (1081)
T KOG0618|consen 295 AYNELEYIPPF-LEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTD 373 (1081)
T ss_pred hhhhhhhCCCc-ccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccc
Confidence 77777766553 234667777777777776655544433332 4555555555444321111223456666677776665
Q ss_pred cccccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCCcCCcccc
Q psy10289 324 VTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTDIPKGLF 403 (497)
Q Consensus 324 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~l~~~~~ 403 (497)
-.-..+-++++|+.|++++|++..++...+..+.. |++|++|||.++ .++..+..++.|+.|...+|++...|. +
T Consensus 374 ~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~-LeeL~LSGNkL~--~Lp~tva~~~~L~tL~ahsN~l~~fPe--~ 448 (1081)
T KOG0618|consen 374 SCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEE-LEELNLSGNKLT--TLPDTVANLGRLHTLRAHSNQLLSFPE--L 448 (1081)
T ss_pred cchhhhccccceeeeeecccccccCCHHHHhchHH-hHHHhcccchhh--hhhHHHHhhhhhHHHhhcCCceeechh--h
Confidence 44444666677777777777777777666666666 777777777666 456666666777777777777666663 4
Q ss_pred cCCCcCcEEeCcCCCCcccchhhhccCCCCCEEECCCCcc
Q psy10289 404 KMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443 (497)
Q Consensus 404 ~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l 443 (497)
..++.|+.+|+|.|+++.+....-..-++|++||++||.-
T Consensus 449 ~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 449 AQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 5666777777777766654332222226677777777653
No 12
>KOG0618|consensus
Probab=99.91 E-value=1.8e-26 Score=230.16 Aligned_cols=318 Identities=26% Similarity=0.354 Sum_probs=262.9
Q ss_pred ccccCCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcC
Q psy10289 111 PIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSD 190 (497)
Q Consensus 111 ~~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~ 190 (497)
..+..+++|+.|....|+++.+.. .-++|+.|+.++|.++.+.. -.--.+|++++++.|.+..+| ++...+.+
T Consensus 193 ~dls~~~~l~~l~c~rn~ls~l~~----~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~~lp-~wi~~~~n 265 (1081)
T KOG0618|consen 193 LDLSNLANLEVLHCERNQLSELEI----SGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLSNLP-EWIGACAN 265 (1081)
T ss_pred hhhhhccchhhhhhhhcccceEEe----cCcchheeeeccCcceeecc--ccccccceeeecchhhhhcch-HHHHhccc
Confidence 456778888888888888877643 23689999999999885532 223458999999999999999 67899999
Q ss_pred CcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCC-ccEEEcc
Q psy10289 191 LRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILAD-LIYLDLG 269 (497)
Q Consensus 191 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~-L~~L~l~ 269 (497)
|+.++..+|+++.+ +..+..+.+|+++.+..|.+..+++. ..+...|++|++..|.+..++...+.-... +..++.+
T Consensus 266 le~l~~n~N~l~~l-p~ri~~~~~L~~l~~~~nel~yip~~-le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s 343 (1081)
T KOG0618|consen 266 LEALNANHNRLVAL-PLRISRITSLVSLSAAYNELEYIPPF-LEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVS 343 (1081)
T ss_pred ceEecccchhHHhh-HHHHhhhhhHHHHHhhhhhhhhCCCc-ccccceeeeeeehhccccccchHHHhhhhHHHHHHhhh
Confidence 99999999999877 66677889999999999999999764 566899999999999999988866665554 7888888
Q ss_pred CCCCCccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccC
Q psy10289 270 YNQLKYLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349 (497)
Q Consensus 270 ~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 349 (497)
.|.+...+...=...+.|+.|++.+|.+++..-..+.+..+|+.|+|++|++..++...+.++..|++|++|||+++.++
T Consensus 344 ~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp 423 (1081)
T KOG0618|consen 344 SNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLP 423 (1081)
T ss_pred hccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhh
Confidence 88877655433345678999999999999877677888899999999999999999999999999999999999999987
Q ss_pred cccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccchhhhcc
Q psy10289 350 VASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS 429 (497)
Q Consensus 350 ~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 429 (497)
.....+.. |++|...+|.+. .+| .+..++.|+.+|++.|.++.+....-..-++|+.||+++|.-.......|..
T Consensus 424 -~tva~~~~-L~tL~ahsN~l~--~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~ 498 (1081)
T KOG0618|consen 424 -DTVANLGR-LHTLRAHSNQLL--SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKV 498 (1081)
T ss_pred -HHHHhhhh-hHHHhhcCCcee--ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHH
Confidence 66777777 999999999876 556 7788999999999999988543221122289999999999877777788888
Q ss_pred CCCCCEEECCCCc
Q psy10289 430 NIKLTHLDLSRNK 442 (497)
Q Consensus 430 ~~~L~~L~l~~n~ 442 (497)
++++...++.-++
T Consensus 499 l~~l~~~~i~~~~ 511 (1081)
T KOG0618|consen 499 LKSLSQMDITLNN 511 (1081)
T ss_pred hhhhhheecccCC
Confidence 8888888887773
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=1.7e-21 Score=215.26 Aligned_cols=282 Identities=21% Similarity=0.227 Sum_probs=135.1
Q ss_pred CCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCc-CccCCccccCCCCCCcEEeccCC-CCccCCcccccCCcCCc
Q psy10289 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN-ITSLLDYNFKGMMNLQELYLDFN-KIESIPSSVFMHLSDLR 192 (497)
Q Consensus 115 ~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~n-~~~~~~~~~~~~l~~L~ 192 (497)
...+|++|+++++.+..++. .+..+++|+.|+++++. +..++ .+..+++|++|++++| .+..+|.. +..+++|+
T Consensus 609 ~~~~L~~L~L~~s~l~~L~~-~~~~l~~Lk~L~Ls~~~~l~~ip--~ls~l~~Le~L~L~~c~~L~~lp~s-i~~L~~L~ 684 (1153)
T PLN03210 609 RPENLVKLQMQGSKLEKLWD-GVHSLTGLRNIDLRGSKNLKEIP--DLSMATNLETLKLSDCSSLVELPSS-IQYLNKLE 684 (1153)
T ss_pred CccCCcEEECcCcccccccc-ccccCCCCCEEECCCCCCcCcCC--ccccCCcccEEEecCCCCccccchh-hhccCCCC
Confidence 34566666666666655532 34455666666666543 33332 2455566666666654 23444433 45566666
Q ss_pred EEeccCCC-CCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCC
Q psy10289 193 VLSLAHNR-ISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271 (497)
Q Consensus 193 ~L~l~~n~-i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n 271 (497)
.|++++|. +..+ |..+ ++++|+.|++++|......+. ...+|+.|+++++.+..++... .+++|++|++.++
T Consensus 685 ~L~L~~c~~L~~L-p~~i-~l~sL~~L~Lsgc~~L~~~p~---~~~nL~~L~L~~n~i~~lP~~~--~l~~L~~L~l~~~ 757 (1153)
T PLN03210 685 DLDMSRCENLEIL-PTGI-NLKSLYRLNLSGCSRLKSFPD---ISTNISWLDLDETAIEEFPSNL--RLENLDELILCEM 757 (1153)
T ss_pred EEeCCCCCCcCcc-CCcC-CCCCCCEEeCCCCCCcccccc---ccCCcCeeecCCCccccccccc--ccccccccccccc
Confidence 66666543 3333 2222 455666666666542222121 1235556666666655544321 2455555555442
Q ss_pred CCC-------ccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCc-ccccccccccCCCCCCEEECcCC
Q psy10289 272 QLK-------YLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNR-LAKVTTTAFTNLTNLIELDISYN 343 (497)
Q Consensus 272 ~l~-------~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~l~~n 343 (497)
... ...+......++|+.|++++|......|..+..+++|+.|++++|. +..++.. . .+++|+.|++++|
T Consensus 758 ~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~-~-~L~sL~~L~Ls~c 835 (1153)
T PLN03210 758 KSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTG-I-NLESLESLDLSGC 835 (1153)
T ss_pred chhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCC-C-CccccCEEECCCC
Confidence 211 1111112223455555555554444444455555555555555543 3333222 1 4555555555554
Q ss_pred CC-CccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCC-cCCcCCcccccCCCcCcEEeCcCC
Q psy10289 344 KL-DRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADM-NYTDIPKGLFKMNPHLQFLNLSGN 417 (497)
Q Consensus 344 ~l-~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n-~i~~l~~~~~~~~~~L~~L~Ls~n 417 (497)
.. ..+ ...+.+++.|++++|.++ .+|..+..+++|+.|++++| .+..+|... ..+++|+.+++++|
T Consensus 836 ~~L~~~-----p~~~~nL~~L~Ls~n~i~--~iP~si~~l~~L~~L~L~~C~~L~~l~~~~-~~L~~L~~L~l~~C 903 (1153)
T PLN03210 836 SRLRTF-----PDISTNISDLNLSRTGIE--EVPWWIEKFSNLSFLDMNGCNNLQRVSLNI-SKLKHLETVDFSDC 903 (1153)
T ss_pred Cccccc-----cccccccCEeECCCCCCc--cChHHHhcCCCCCEEECCCCCCcCccCccc-ccccCCCeeecCCC
Confidence 21 111 111223555555555544 34445555555555555554 344444432 34455555555554
No 14
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=1.1e-21 Score=201.91 Aligned_cols=265 Identities=24% Similarity=0.224 Sum_probs=164.4
Q ss_pred CCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEec
Q psy10289 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196 (497)
Q Consensus 117 ~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l 196 (497)
..-..|+++++.++.++.. +. ++|+.|++++|+++.++. ..++|++|++++|.++.+|.. .++|+.|++
T Consensus 201 ~~~~~LdLs~~~LtsLP~~-l~--~~L~~L~L~~N~Lt~LP~----lp~~Lk~LdLs~N~LtsLP~l----p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPDC-LP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPVL----PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCCcCCcc-hh--cCCCEEEccCCcCCCCCC----CCCCCcEEEecCCccCcccCc----ccccceeec
Confidence 3455677777777776542 32 367777777777776643 246777777777777777642 357777777
Q ss_pred cCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCCCCCcc
Q psy10289 197 AHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLKYL 276 (497)
Q Consensus 197 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 276 (497)
++|.++.+. .. ..+|+.|++++|+++.++. ..++|+.|++++|.++.++.. ..+|+.|++++|.++++
T Consensus 270 s~N~L~~Lp-~l---p~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~l----p~~L~~L~Ls~N~L~~L 337 (788)
T PRK15387 270 FSNPLTHLP-AL---PSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPAL----PSELCKLWAYNNQLTSL 337 (788)
T ss_pred cCCchhhhh-hc---hhhcCEEECcCCccccccc----cccccceeECCCCccccCCCC----cccccccccccCccccc
Confidence 777776652 22 2457777777777776643 235677777777777766431 23566777777777653
Q ss_pred ChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCccccccc
Q psy10289 277 LADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356 (497)
Q Consensus 277 ~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~ 356 (497)
+. + ..+|+.|++++|.+.++++ . ..+|+.|++++|.+..++.. ..+|+.|++++|+++.++..
T Consensus 338 P~--l--p~~Lq~LdLS~N~Ls~LP~-l---p~~L~~L~Ls~N~L~~LP~l----~~~L~~LdLs~N~Lt~LP~l----- 400 (788)
T PRK15387 338 PT--L--PSGLQELSVSDNQLASLPT-L---PSELYKLWAYNNRLTSLPAL----PSGLKELIVSGNRLTSLPVL----- 400 (788)
T ss_pred cc--c--ccccceEecCCCccCCCCC-C---CcccceehhhccccccCccc----ccccceEEecCCcccCCCCc-----
Confidence 31 1 1357777777777665432 1 24566677777777665431 24667777777776655421
Q ss_pred ccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccchhhh
Q psy10289 357 ENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLY 427 (497)
Q Consensus 357 ~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 427 (497)
+.+|+.|++++|.++ .+|.. ..+|+.|++++|+++.+|.. +..+++|+.|+|++|++++..+..+
T Consensus 401 ~s~L~~LdLS~N~Ls--sIP~l---~~~L~~L~Ls~NqLt~LP~s-l~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 401 PSELKELMVSGNRLT--SLPML---PSGLLSLSVYRNQLTRLPES-LIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred ccCCCEEEccCCcCC--CCCcc---hhhhhhhhhccCcccccChH-HhhccCCCeEECCCCCCCchHHHHH
Confidence 223677777777665 23332 23566677777777777665 3556677777777777766555444
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=1.5e-21 Score=200.98 Aligned_cols=261 Identities=22% Similarity=0.244 Sum_probs=210.9
Q ss_pred CCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEec
Q psy10289 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDL 220 (497)
Q Consensus 141 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l 220 (497)
..-..|+++++.++.+++ .+. ++|+.|++.+|.++.+|. ..++|++|++++|+++.++ . ..++|+.|++
T Consensus 201 ~~~~~LdLs~~~LtsLP~-~l~--~~L~~L~L~~N~Lt~LP~----lp~~Lk~LdLs~N~LtsLP-~---lp~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPD-CLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLP-V---LPPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCCcCCc-chh--cCCCEEEccCCcCCCCCC----CCCCCcEEEecCCccCccc-C---cccccceeec
Confidence 457789999999998755 343 489999999999999985 2589999999999999883 2 2468999999
Q ss_pred cCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCc
Q psy10289 221 SYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVI 300 (497)
Q Consensus 221 ~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 300 (497)
++|.+..++. . ..+|+.|++++|.++.++. .+++|+.|++++|.+.+++. . ..+|+.|++++|.+.++
T Consensus 270 s~N~L~~Lp~-l---p~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~-l---p~~L~~L~Ls~N~L~~L 337 (788)
T PRK15387 270 FSNPLTHLPA-L---PSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPA-L---PSELCKLWAYNNQLTSL 337 (788)
T ss_pred cCCchhhhhh-c---hhhcCEEECcCCccccccc----cccccceeECCCCccccCCC-C---cccccccccccCccccc
Confidence 9999988754 2 3578899999999998865 25789999999999987532 2 24688899999999875
Q ss_pred CccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcchhhHhh
Q psy10289 301 LEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLD 380 (497)
Q Consensus 301 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~ 380 (497)
+. ...+|++|++++|+++.++.. ..+|+.|++++|++..++. .+.+|+.|++++|.++ .+|..
T Consensus 338 P~----lp~~Lq~LdLS~N~Ls~LP~l----p~~L~~L~Ls~N~L~~LP~-----l~~~L~~LdLs~N~Lt--~LP~l-- 400 (788)
T PRK15387 338 PT----LPSGLQELSVSDNQLASLPTL----PSELYKLWAYNNRLTSLPA-----LPSGLKELIVSGNRLT--SLPVL-- 400 (788)
T ss_pred cc----cccccceEecCCCccCCCCCC----CcccceehhhccccccCcc-----cccccceEEecCCccc--CCCCc--
Confidence 42 235899999999999987652 3688999999999987653 2234999999999987 34432
Q ss_pred cCCCCCEEecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccchhhhccCCCCCEEECCCCcccccc
Q psy10289 381 KLVKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFD 447 (497)
Q Consensus 381 ~~~~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 447 (497)
.++|+.|++++|+++.+|.. ..+|+.|++++|+++.++. .+..+++|+.|++++|++++..
T Consensus 401 -~s~L~~LdLS~N~LssIP~l----~~~L~~L~Ls~NqLt~LP~-sl~~L~~L~~LdLs~N~Ls~~~ 461 (788)
T PRK15387 401 -PSELKELMVSGNRLTSLPML----PSGLLSLSVYRNQLTRLPE-SLIHLSSETTVNLEGNPLSERT 461 (788)
T ss_pred -ccCCCEEEccCCcCCCCCcc----hhhhhhhhhccCcccccCh-HHhhccCCCeEECCCCCCCchH
Confidence 36899999999999999863 2578999999999998865 4788999999999999998743
No 16
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.86 E-value=7e-20 Score=202.52 Aligned_cols=315 Identities=19% Similarity=0.241 Sum_probs=197.7
Q ss_pred ccccCCC-CCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCC-CCccCCcccccCC
Q psy10289 111 PIFQQFQ-HLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN-KIESIPSSVFMHL 188 (497)
Q Consensus 111 ~~~~~~~-~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n-~~~~~~~~~~~~l 188 (497)
..|..++ +|+.|++.++.++.++. .| ...+|+.|++++|++..++ ..+..+++|+.++++++ .++.+|. ++.+
T Consensus 582 ~~~~~lp~~Lr~L~~~~~~l~~lP~-~f-~~~~L~~L~L~~s~l~~L~-~~~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l 656 (1153)
T PLN03210 582 EGFDYLPPKLRLLRWDKYPLRCMPS-NF-RPENLVKLQMQGSKLEKLW-DGVHSLTGLRNIDLRGSKNLKEIPD--LSMA 656 (1153)
T ss_pred cchhhcCcccEEEEecCCCCCCCCC-cC-CccCCcEEECcCccccccc-cccccCCCCCEEECCCCCCcCcCCc--cccC
Confidence 3344443 46666666666666543 23 3456777777777766553 34566677777777665 3455553 5566
Q ss_pred cCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCC-CCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEE
Q psy10289 189 SDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYND-IVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLD 267 (497)
Q Consensus 189 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~ 267 (497)
++|+.|++++|......|..+..+++|+.|++++|. +..++.. + ++++|+.|++++|......+. ...+|++|+
T Consensus 657 ~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~-i-~l~sL~~L~Lsgc~~L~~~p~---~~~nL~~L~ 731 (1153)
T PLN03210 657 TNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTG-I-NLKSLYRLNLSGCSRLKSFPD---ISTNISWLD 731 (1153)
T ss_pred CcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCc-C-CCCCCCEEeCCCCCCcccccc---ccCCcCeee
Confidence 777777777765433335566677777777777653 4444432 2 466777777776643322221 134677777
Q ss_pred ccCCCCCccChhhhcCCccCceeeccCCcCCC-------cCccccCCCCCccEEEccCCcccccccccccCCCCCCEEEC
Q psy10289 268 LGYNQLKYLLADELEDLKKLETLLLDGNHFPV-------ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340 (497)
Q Consensus 268 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~-------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l 340 (497)
+++|.+...+ ..+ .+++|+.|.+.++.... ..+..+..+++|++|++++|......|..+.++++|+.|++
T Consensus 732 L~~n~i~~lP-~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~L 809 (1153)
T PLN03210 732 LDETAIEEFP-SNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEI 809 (1153)
T ss_pred cCCCcccccc-ccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEEC
Confidence 7777765432 222 45666766666533211 11112233568889999888655545566888999999999
Q ss_pred cCC-CCCccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCCcCCcccccCCCcCcEEeCcCC-C
Q psy10289 341 SYN-KLDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGN-N 418 (497)
Q Consensus 341 ~~n-~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n-~ 418 (497)
++| .+..++... .++. |+.|++++|..- ..++. ..++|+.|++++|.++.+|.. +..+++|+.|++++| +
T Consensus 810 s~C~~L~~LP~~~--~L~s-L~~L~Ls~c~~L-~~~p~---~~~nL~~L~Ls~n~i~~iP~s-i~~l~~L~~L~L~~C~~ 881 (1153)
T PLN03210 810 ENCINLETLPTGI--NLES-LESLDLSGCSRL-RTFPD---ISTNISDLNLSRTGIEEVPWW-IEKFSNLSFLDMNGCNN 881 (1153)
T ss_pred CCCCCcCeeCCCC--Cccc-cCEEECCCCCcc-ccccc---cccccCEeECCCCCCccChHH-HhcCCCCCEEECCCCCC
Confidence 987 455554332 3444 999999988632 22332 236789999999999999876 477899999999885 5
Q ss_pred CcccchhhhccCCCCCEEECCCC-ccccc
Q psy10289 419 LQDIHNLLYQSNIKLTHLDLSRN-KFKGF 446 (497)
Q Consensus 419 l~~~~~~~~~~~~~L~~L~l~~n-~l~~~ 446 (497)
+..++. .+..+++|+.+++++| .++.+
T Consensus 882 L~~l~~-~~~~L~~L~~L~l~~C~~L~~~ 909 (1153)
T PLN03210 882 LQRVSL-NISKLKHLETVDFSDCGALTEA 909 (1153)
T ss_pred cCccCc-ccccccCCCeeecCCCcccccc
Confidence 666554 4567888999999988 45443
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.79 E-value=8.8e-19 Score=181.68 Aligned_cols=248 Identities=19% Similarity=0.298 Sum_probs=159.4
Q ss_pred CCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEec
Q psy10289 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDL 220 (497)
Q Consensus 141 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l 220 (497)
.+...|+++++.++.++.. + .++|+.|++++|.++.+|...+ .+|++|++++|.++.+ |..+. .+|+.|++
T Consensus 178 ~~~~~L~L~~~~LtsLP~~-I--p~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~LtsL-P~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLTTIPAC-I--PEQITTLILDNNELKSLPENLQ---GNIKTLYANSNQLTSI-PATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcCcCCcc-c--ccCCcEEEecCCCCCcCChhhc---cCCCEEECCCCccccC-Chhhh--ccccEEEC
Confidence 3567888888888877532 2 2478888888888888887653 4788888888888877 33332 46888888
Q ss_pred cCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCc
Q psy10289 221 SYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVI 300 (497)
Q Consensus 221 ~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 300 (497)
++|.+..++.... .+|+.|++++|.++.++... .++|+.|++++|.++.++. .+. ++|+.|++++|.+..+
T Consensus 249 s~N~L~~LP~~l~---s~L~~L~Ls~N~L~~LP~~l---~~sL~~L~Ls~N~Lt~LP~-~lp--~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 249 SINRITELPERLP---SALQSLDLFHNKISCLPENL---PEELRYLSVYDNSIRTLPA-HLP--SGITHLNVQSNSLTAL 319 (754)
T ss_pred cCCccCcCChhHh---CCCCEEECcCCccCcccccc---CCCCcEEECCCCccccCcc-cch--hhHHHHHhcCCccccC
Confidence 8888887765432 46888888888888765432 2478888888887776432 221 3577777777777654
Q ss_pred CccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcchhhHhh
Q psy10289 301 LEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLD 380 (497)
Q Consensus 301 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~ 380 (497)
... + .++|+.|++++|.++.++.. + +++|+.|++++|++..++.. + +.+|+.|++++|.++ .+|..+.
T Consensus 320 P~~-l--~~sL~~L~Ls~N~Lt~LP~~-l--~~sL~~L~Ls~N~L~~LP~~-l---p~~L~~LdLs~N~Lt--~LP~~l~ 387 (754)
T PRK15370 320 PET-L--PPGLKTLEAGENALTSLPAS-L--PPELQVLDVSKNQITVLPET-L---PPTITTLDVSRNALT--NLPENLP 387 (754)
T ss_pred Ccc-c--cccceeccccCCccccCChh-h--cCcccEEECCCCCCCcCChh-h---cCCcCEEECCCCcCC--CCCHhHH
Confidence 322 1 24677777777777665432 2 25677777777766654421 1 223677777777665 3343332
Q ss_pred cCCCCCEEecCCCcCCcCCccc---ccCCCcCcEEeCcCCCCc
Q psy10289 381 KLVKLKALSIADMNYTDIPKGL---FKMNPHLQFLNLSGNNLQ 420 (497)
Q Consensus 381 ~~~~L~~L~l~~n~i~~l~~~~---~~~~~~L~~L~Ls~n~l~ 420 (497)
..|+.|++++|+++.+|..+ +..++++..|++.+|+++
T Consensus 388 --~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 388 --AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred --HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 24666667777666665432 223456666666666665
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.79 E-value=1.5e-18 Score=180.03 Aligned_cols=248 Identities=23% Similarity=0.283 Sum_probs=144.0
Q ss_pred CCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEecc
Q psy10289 118 HLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197 (497)
Q Consensus 118 ~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~ 197 (497)
+..+|+++++.++.++.. + .++|+.|++++|+++.++...+ ++|++|++++|.++.+|.... ++|+.|+++
T Consensus 179 ~~~~L~L~~~~LtsLP~~-I--p~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~LtsLP~~l~---~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTTIPAC-I--PEQITTLILDNNELKSLPENLQ---GNIKTLYANSNQLTSIPATLP---DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCcCCcc-c--ccCCcEEEecCCCCCcCChhhc---cCCCEEECCCCccccCChhhh---ccccEEECc
Confidence 456677777666666532 2 2357777777777776644322 367777777777776665432 357777777
Q ss_pred CCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCCCCCccC
Q psy10289 198 HNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLKYLL 277 (497)
Q Consensus 198 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 277 (497)
+|.+..+ |..+. .+|+.|++++|.+..++.. + .++|+.|++++|.++.++... .++|+.|++++|.+..++
T Consensus 250 ~N~L~~L-P~~l~--s~L~~L~Ls~N~L~~LP~~-l--~~sL~~L~Ls~N~Lt~LP~~l---p~sL~~L~Ls~N~Lt~LP 320 (754)
T PRK15370 250 INRITEL-PERLP--SALQSLDLFHNKISCLPEN-L--PEELRYLSVYDNSIRTLPAHL---PSGITHLNVQSNSLTALP 320 (754)
T ss_pred CCccCcC-ChhHh--CCCCEEECcCCccCccccc-c--CCCCcEEECCCCccccCcccc---hhhHHHHHhcCCccccCC
Confidence 7776655 33332 4677777777776665433 2 135777777777776654322 235667777777666543
Q ss_pred hhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCcccccccc
Q psy10289 278 ADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357 (497)
Q Consensus 278 ~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~ 357 (497)
. .+ .++|+.|++++|.++++. ..+ +++|+.|++++|++..++.. + .++|+.|++++|+++.++... +
T Consensus 321 ~-~l--~~sL~~L~Ls~N~Lt~LP-~~l--~~sL~~L~Ls~N~L~~LP~~-l--p~~L~~LdLs~N~Lt~LP~~l----~ 387 (754)
T PRK15370 321 E-TL--PPGLKTLEAGENALTSLP-ASL--PPELQVLDVSKNQITVLPET-L--PPTITTLDVSRNALTNLPENL----P 387 (754)
T ss_pred c-cc--cccceeccccCCccccCC-hhh--cCcccEEECCCCCCCcCChh-h--cCCcCEEECCCCcCCCCCHhH----H
Confidence 2 22 246677777777666532 222 24677777777776655432 2 256777777777776654332 2
Q ss_pred cCCCEEEcCCCcCCCc--chhhHhhcCCCCCEEecCCCcCC
Q psy10289 358 NSLRDLKISGNNIQLS--DVKNVLDKLVKLKALSIADMNYT 396 (497)
Q Consensus 358 ~~L~~L~ls~n~i~~~--~~~~~~~~~~~L~~L~l~~n~i~ 396 (497)
.+|+.|++++|.++.. .++.....++++..|++.+|.++
T Consensus 388 ~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 388 AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 2366677777766511 12223333466667777777654
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=1.6e-18 Score=166.92 Aligned_cols=275 Identities=23% Similarity=0.271 Sum_probs=132.4
Q ss_pred EEeccCCcCcc-CCccccCCCCCCcEEeccCCCCcc-----CCcccccCCcCCcEEeccCCCCCCC------ChhhhcCC
Q psy10289 145 YLNLTHNNITS-LLDYNFKGMMNLQELYLDFNKIES-----IPSSVFMHLSDLRVLSLAHNRISKL------APRLFLKL 212 (497)
Q Consensus 145 ~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~~~~-----~~~~~~~~l~~L~~L~l~~n~i~~~------~~~~~~~l 212 (497)
.|+|..+.+++ -....+..+.+|+.++++++.++. ++. .+...+.+++++++++.+... .+..+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~-~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALAS-ALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKG 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHH-HHhhCCCceEEeccccccCCcchHHHHHHHHHHhc
Confidence 35555555542 222334455567777777766532 222 233455566666666655421 11234445
Q ss_pred CCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCCCCCc----cChhhhcCC-ccC
Q psy10289 213 SKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLKY----LLADELEDL-KKL 287 (497)
Q Consensus 213 ~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~----~~~~~~~~l-~~L 287 (497)
++|++|++++|.+....+..+..+.. . ++|++|++++|.+.+ .....+..+ ++|
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~--------------------~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L 139 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLR--------------------S-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPAL 139 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhc--------------------c-CcccEEEeeCCccchHHHHHHHHHHHhCCCCc
Confidence 56666666665554433333332222 0 124444444444331 111223333 445
Q ss_pred ceeeccCCcCCCc----CccccCCCCCccEEEccCCcccccc----cccccCCCCCCEEECcCCCCCccCcc----cccc
Q psy10289 288 ETLLLDGNHFPVI----LEKSFSSQFKLQVLCLKRNRLAKVT----TTAFTNLTNLIELDISYNKLDRLEVA----SFDP 355 (497)
Q Consensus 288 ~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~n~l~~~~----~~~~~~~~~L~~L~l~~n~l~~~~~~----~~~~ 355 (497)
++|++++|.+++. ....+..+++|++|++++|.+.+.. ...+..+++|++|++++|.+.+.... .+..
T Consensus 140 ~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~ 219 (319)
T cd00116 140 EKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLAS 219 (319)
T ss_pred eEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcc
Confidence 5555555544421 1122334445555555555554211 11233445666666666665533222 2223
Q ss_pred cccCCCEEEcCCCcCCCcchhhHhhc----CCCCCEEecCCCcCCc-----CCcccccCCCcCcEEeCcCCCCcccchh-
Q psy10289 356 IENSLRDLKISGNNIQLSDVKNVLDK----LVKLKALSIADMNYTD-----IPKGLFKMNPHLQFLNLSGNNLQDIHNL- 425 (497)
Q Consensus 356 ~~~~L~~L~ls~n~i~~~~~~~~~~~----~~~L~~L~l~~n~i~~-----l~~~~~~~~~~L~~L~Ls~n~l~~~~~~- 425 (497)
++. |+.|++++|.++...+...... .+.|++|++++|.++. +.. .+..+++|+.+++++|.++..+..
T Consensus 220 ~~~-L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~-~~~~~~~L~~l~l~~N~l~~~~~~~ 297 (319)
T cd00116 220 LKS-LEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAE-VLAEKESLLELDLRGNKFGEEGAQL 297 (319)
T ss_pred cCC-CCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHH-HHhcCCCccEEECCCCCCcHHHHHH
Confidence 333 6666666666553222222222 2566777777766541 111 234446777777777777755332
Q ss_pred ---hhccC-CCCCEEECCCCcc
Q psy10289 426 ---LYQSN-IKLTHLDLSRNKF 443 (497)
Q Consensus 426 ---~~~~~-~~L~~L~l~~n~l 443 (497)
.+... +.|+++++.+|++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 298 LAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHHhhcCCchhhcccCCCCC
Confidence 23333 5777777777653
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=1.5e-18 Score=167.04 Aligned_cols=278 Identities=21% Similarity=0.235 Sum_probs=157.7
Q ss_pred EEEccCCCCCccC-CCCCCCCCCCCEEeccCCcCccC----CccccCCCCCCcEEeccCCCCccCC------cccccCCc
Q psy10289 121 ELHITNSFIPAIG-FHPFWGVPSLRYLNLTHNNITSL----LDYNFKGMMNLQELYLDFNKIESIP------SSVFMHLS 189 (497)
Q Consensus 121 ~L~l~~~~i~~~~-~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~~~~~~------~~~~~~l~ 189 (497)
.|+|..+.++.-. ...|..+.+|+.|+++++.++.. .+..+...+++++++++++.+...+ ...+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4677777776322 23456777899999999988542 1334567788999999998776322 23467788
Q ss_pred CCcEEeccCCCCCCCChhhhcCCCC---CCEEeccCCCCCccC----hhhhcCC-ccccEEEcCCCCCcccC----cccc
Q psy10289 190 DLRVLSLAHNRISKLAPRLFLKLSK---LKSLDLSYNDIVEIN----PEIFKDI-QELKTFKCRSCGLENIN----PMMY 257 (497)
Q Consensus 190 ~L~~L~l~~n~i~~~~~~~~~~l~~---L~~L~l~~n~i~~~~----~~~~~~~-~~L~~L~l~~~~l~~~~----~~~~ 257 (497)
+|+.|++++|.+....+..+..+.. |++|++++|.+.+.. ...+..+ ++|+.|++++|.++... ...+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999998665666655555 999999999877421 2233444 56666666666655211 1123
Q ss_pred cCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccccc----cccccCCC
Q psy10289 258 SILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT----TTAFTNLT 333 (497)
Q Consensus 258 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~----~~~~~~~~ 333 (497)
..+.+|++|++++|.+.+..... .+..+...++|++|++++|.+.... ...+..++
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~--------------------l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~ 221 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRA--------------------LAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLK 221 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHH--------------------HHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccC
Confidence 33444555555555444211000 1111222345555555555443221 12244556
Q ss_pred CCCEEECcCCCCCccCccccccc----ccCCCEEEcCCCcCCCc---chhhHhhcCCCCCEEecCCCcCCcCCc----cc
Q psy10289 334 NLIELDISYNKLDRLEVASFDPI----ENSLRDLKISGNNIQLS---DVKNVLDKLVKLKALSIADMNYTDIPK----GL 402 (497)
Q Consensus 334 ~L~~L~l~~n~l~~~~~~~~~~~----~~~L~~L~ls~n~i~~~---~~~~~~~~~~~L~~L~l~~n~i~~l~~----~~ 402 (497)
+|++|++++|.+++.....+... ...|+.|++++|.++.. .+...+..+++|+.+++++|.++.-+. .+
T Consensus 222 ~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~ 301 (319)
T cd00116 222 SLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAES 301 (319)
T ss_pred CCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHH
Confidence 66666666666654322222211 02366677776666422 223444555667777777776653321 11
Q ss_pred ccCC-CcCcEEeCcCCC
Q psy10289 403 FKMN-PHLQFLNLSGNN 418 (497)
Q Consensus 403 ~~~~-~~L~~L~Ls~n~ 418 (497)
+... +.|+.+++.+|+
T Consensus 302 ~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 302 LLEPGNELESLWVKDDS 318 (319)
T ss_pred HhhcCCchhhcccCCCC
Confidence 2233 567777776664
No 21
>KOG0617|consensus
Probab=99.61 E-value=1.5e-17 Score=134.98 Aligned_cols=183 Identities=20% Similarity=0.323 Sum_probs=142.3
Q ss_pred cCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCcccccccccCCC
Q psy10289 282 EDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361 (497)
Q Consensus 282 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~ 361 (497)
..+..++.|.++.|+++.+.| .++.+.+|+.|++++|++...+.. ++.+++|+.|+++.|++... +..|..+|. |+
T Consensus 30 f~~s~ITrLtLSHNKl~~vpp-nia~l~nlevln~~nnqie~lp~~-issl~klr~lnvgmnrl~~l-prgfgs~p~-le 105 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLTVVPP-NIAELKNLEVLNLSNNQIEELPTS-ISSLPKLRILNVGMNRLNIL-PRGFGSFPA-LE 105 (264)
T ss_pred cchhhhhhhhcccCceeecCC-cHHHhhhhhhhhcccchhhhcChh-hhhchhhhheecchhhhhcC-ccccCCCch-hh
Confidence 345566677777777766444 456667777777777777776553 67778888888888877654 456777776 88
Q ss_pred EEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccchhhhccCCCCCEEECCCC
Q psy10289 362 DLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441 (497)
Q Consensus 362 ~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n 441 (497)
.||+.+|.+....+|..|-.+..|+.|++++|.+..+|+.+ +.+++|+.|.++.|.+-.++. .++.+..|++|++.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dv-g~lt~lqil~lrdndll~lpk-eig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDV-GKLTNLQILSLRDNDLLSLPK-EIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhh-hhhcceeEEeeccCchhhCcH-HHHHHHHHHHHhcccc
Confidence 88888888877777777778888999999999999999886 889999999999999888765 4678899999999999
Q ss_pred ccccccCCCccc--CCchhHHHHhhhhhHhh
Q psy10289 442 KFKGFDEKSYIM--SEPKNIHKAAKNSFALQ 470 (497)
Q Consensus 442 ~l~~~~~~~~~~--~~~~~~~~~~~n~~~~~ 470 (497)
+++-+|++.... ...+.......|||..+
T Consensus 184 rl~vlppel~~l~l~~~k~v~r~E~NPwv~p 214 (264)
T KOG0617|consen 184 RLTVLPPELANLDLVGNKQVMRMEENPWVNP 214 (264)
T ss_pred eeeecChhhhhhhhhhhHHHHhhhhCCCCCh
Confidence 999999987753 34455567888888733
No 22
>KOG0617|consensus
Probab=99.52 E-value=2.4e-16 Score=128.02 Aligned_cols=157 Identities=22% Similarity=0.348 Sum_probs=83.3
Q ss_pred ccCCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCc
Q psy10289 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLR 192 (497)
Q Consensus 113 ~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~ 192 (497)
+..+.+++.|.+++|+++.+++ .++.+.+|+.|++++|+++.+ |..++.+++|+.|+++.|.+..+|.+ |+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~~vpp-nia~l~nlevln~~nnqie~l-p~~issl~klr~lnvgmnrl~~lprg-fgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLTVVPP-NIAELKNLEVLNLSNNQIEEL-PTSISSLPKLRILNVGMNRLNILPRG-FGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCceeecCC-cHHHhhhhhhhhcccchhhhc-ChhhhhchhhhheecchhhhhcCccc-cCCCchhh
Confidence 3344555566666666666544 345556666666666666555 33455566666666666655555544 55666666
Q ss_pred EEeccCCCCCC-CChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCC
Q psy10289 193 VLSLAHNRISK-LAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271 (497)
Q Consensus 193 ~L~l~~n~i~~-~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n 271 (497)
.||+.+|.+.. ..|..|..|+.|+.|.+++|.+.-++++ ++++++|+.|.++.|.+..++. .++.++.|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~d-vg~lt~lqil~lrdndll~lpk-eig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPD-VGKLTNLQILSLRDNDLLSLPK-EIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChh-hhhhcceeEEeeccCchhhCcH-HHHHHHHHHHHhcccc
Confidence 66666555432 2244444555555555555555544433 4555555555555555444332 2233444444444444
Q ss_pred CCC
Q psy10289 272 QLK 274 (497)
Q Consensus 272 ~l~ 274 (497)
+++
T Consensus 184 rl~ 186 (264)
T KOG0617|consen 184 RLT 186 (264)
T ss_pred eee
Confidence 444
No 23
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.28 E-value=2.7e-12 Score=109.15 Aligned_cols=129 Identities=29% Similarity=0.384 Sum_probs=45.4
Q ss_pred cccCCCCCcEEEccCCCCCccCCCCCC-CCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcC
Q psy10289 112 IFQQFQHLEELHITNSFIPAIGFHPFW-GVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSD 190 (497)
Q Consensus 112 ~~~~~~~L~~L~l~~~~i~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~ 190 (497)
.+.+..++++|++++|.|+.|. .+. .+.+|+.|++++|.|+.+. .+..+++|++|++++|.++.++......+++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~Ie--~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~ 89 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQISTIE--NLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSISEGLDKNLPN 89 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S-CHHHHHH-TT
T ss_pred cccccccccccccccccccccc--chhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCccccchHHhCCc
Confidence 3455567788888888888775 233 4678888888888888773 4677788888888888888776543345778
Q ss_pred CcEEeccCCCCCCCCh-hhhcCCCCCCEEeccCCCCCccCh---hhhcCCccccEEEc
Q psy10289 191 LRVLSLAHNRISKLAP-RLFLKLSKLKSLDLSYNDIVEINP---EIFKDIQELKTFKC 244 (497)
Q Consensus 191 L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~---~~~~~~~~L~~L~l 244 (497)
|++|++++|++..+.. ..+..+++|+.|++.+|++..... ..+..+|+|+.||-
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 8888888888766533 445667778888887777664322 23445666666553
No 24
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.28 E-value=3.3e-12 Score=108.66 Aligned_cols=121 Identities=29% Similarity=0.395 Sum_probs=36.4
Q ss_pred ccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccC-CCCCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCC
Q psy10289 124 ITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK-GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202 (497)
Q Consensus 124 l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~ 202 (497)
+..+.|..++ .+.+..+++.|+|++|+|+.+. .++ .+.+|+.|++++|.++.++. +..++.|++|++++|+++
T Consensus 4 lt~~~i~~~~--~~~n~~~~~~L~L~~n~I~~Ie--~L~~~l~~L~~L~Ls~N~I~~l~~--l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 4 LTANMIEQIA--QYNNPVKLRELNLRGNQISTIE--NLGATLDKLEVLDLSNNQITKLEG--LPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp ------------------------------------S--TT-TT--EEE-TTS--S--TT------TT--EEE--SS---
T ss_pred cccccccccc--cccccccccccccccccccccc--chhhhhcCCCEEECCCCCCccccC--ccChhhhhhcccCCCCCC
Confidence 3444455543 3445567888888888888773 344 46788888888888888764 667888888888888888
Q ss_pred CCChhhhcCCCCCCEEeccCCCCCccCh-hhhcCCccccEEEcCCCCCc
Q psy10289 203 KLAPRLFLKLSKLKSLDLSYNDIVEINP-EIFKDIQELKTFKCRSCGLE 250 (497)
Q Consensus 203 ~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~~~~L~~L~l~~~~l~ 250 (497)
.+.+.....+++|++|++++|+|.++.. ..+..+++|+.|++.+|.+.
T Consensus 78 ~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 78 SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 7754322457888888888887766533 33555666666666666555
No 25
>KOG1909|consensus
Probab=99.26 E-value=1.7e-12 Score=117.64 Aligned_cols=237 Identities=22% Similarity=0.257 Sum_probs=113.0
Q ss_pred cCCcCCcEEeccCCCCCCCCh----hhhcCCCCCCEEeccCCCC----CccCh------hhhcCCccccEEEcCCCCCcc
Q psy10289 186 MHLSDLRVLSLAHNRISKLAP----RLFLKLSKLKSLDLSYNDI----VEINP------EIFKDIQELKTFKCRSCGLEN 251 (497)
Q Consensus 186 ~~l~~L~~L~l~~n~i~~~~~----~~~~~l~~L~~L~l~~n~i----~~~~~------~~~~~~~~L~~L~l~~~~l~~ 251 (497)
.....++++++++|.+..... ..+.+.+.|+..++++--. ..+++ .++.++++|+.+++++|.+..
T Consensus 27 ~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~ 106 (382)
T KOG1909|consen 27 EPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGP 106 (382)
T ss_pred cccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCc
Confidence 345678888888887764322 3345556777777765311 11211 223344455555555554442
Q ss_pred cCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCccc-------------cCCCCCccEEEccC
Q psy10289 252 INPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEKS-------------FSSQFKLQVLCLKR 318 (497)
Q Consensus 252 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~-------------~~~~~~L~~L~l~~ 318 (497)
-.+.. ...-++.+..|++|++.+|.+....... ....+.|+.+...+
T Consensus 107 ~g~~~--------------------l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~r 166 (382)
T KOG1909|consen 107 KGIRG--------------------LEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGR 166 (382)
T ss_pred cchHH--------------------HHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeec
Confidence 11110 0112233444444444444433221111 12334555555555
Q ss_pred Cccccccc----ccccCCCCCCEEECcCCCCCccCc----ccccccccCCCEEEcCCCcCCCc---chhhHhhcCCCCCE
Q psy10289 319 NRLAKVTT----TAFTNLTNLIELDISYNKLDRLEV----ASFDPIENSLRDLKISGNNIQLS---DVKNVLDKLVKLKA 387 (497)
Q Consensus 319 n~l~~~~~----~~~~~~~~L~~L~l~~n~l~~~~~----~~~~~~~~~L~~L~ls~n~i~~~---~~~~~~~~~~~L~~ 387 (497)
|++...+. ..|+..+.|+.+.+..|.+..... ..+..++. |+.||+..|.++.. .+...++.+++|+.
T Consensus 167 Nrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~-LevLdl~DNtft~egs~~LakaL~s~~~L~E 245 (382)
T KOG1909|consen 167 NRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPH-LEVLDLRDNTFTLEGSVALAKALSSWPHLRE 245 (382)
T ss_pred cccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCc-ceeeecccchhhhHHHHHHHHHhcccchhee
Confidence 55543222 234445555555555555443221 23334443 55555555554421 12334445555666
Q ss_pred EecCCCcCCcCC-----cccccCCCcCcEEeCcCCCCcccch----hhhccCCCCCEEECCCCcc
Q psy10289 388 LSIADMNYTDIP-----KGLFKMNPHLQFLNLSGNNLQDIHN----LLYQSNIKLTHLDLSRNKF 443 (497)
Q Consensus 388 L~l~~n~i~~l~-----~~~~~~~~~L~~L~Ls~n~l~~~~~----~~~~~~~~L~~L~l~~n~l 443 (497)
|++++|.+..=. ..+-...|+|++|.+.+|.|+.-.. .+....|.|..|+|++|.+
T Consensus 246 l~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 246 LNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 666666544221 1122334667777777776665322 2233456677777777766
No 26
>KOG1259|consensus
Probab=99.25 E-value=1.7e-12 Score=115.06 Aligned_cols=136 Identities=21% Similarity=0.236 Sum_probs=105.9
Q ss_pred CCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCC
Q psy10289 306 SSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKL 385 (497)
Q Consensus 306 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L 385 (497)
.....|+++|+++|.|+.+.. ..+-.|.++.|++++|.+..+.. ++.+++ |..||+|+|.++ .+..+-..+.+.
T Consensus 281 dTWq~LtelDLS~N~I~~iDE-SvKL~Pkir~L~lS~N~i~~v~n--La~L~~-L~~LDLS~N~Ls--~~~Gwh~KLGNI 354 (490)
T KOG1259|consen 281 DTWQELTELDLSGNLITQIDE-SVKLAPKLRRLILSQNRIRTVQN--LAELPQ-LQLLDLSGNLLA--ECVGWHLKLGNI 354 (490)
T ss_pred chHhhhhhccccccchhhhhh-hhhhccceeEEeccccceeeehh--hhhccc-ceEeecccchhH--hhhhhHhhhcCE
Confidence 344678888899888887754 46777888999999988877654 666776 889999988876 444555677888
Q ss_pred CEEecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccch-hhhccCCCCCEEECCCCccccccCC
Q psy10289 386 KALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHN-LLYQSNIKLTHLDLSRNKFKGFDEK 449 (497)
Q Consensus 386 ~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~ 449 (497)
+.|.+++|.|.++.. ...+-+|..|++++|+|..+.. ..++++|.|+++.+.+|+++.+++.
T Consensus 355 KtL~La~N~iE~LSG--L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 355 KTLKLAQNKIETLSG--LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred eeeehhhhhHhhhhh--hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 889999988877654 4667788899999998888754 5678888899999999998887764
No 27
>KOG3207|consensus
Probab=99.22 E-value=2.3e-12 Score=120.04 Aligned_cols=186 Identities=23% Similarity=0.258 Sum_probs=102.3
Q ss_pred CCCccEEEccCCCCCccC--hhhhcCCccCceeeccCCcCCCcCcccc-CCCCCccEEEccCCcccccc-cccccCCCCC
Q psy10289 260 LADLIYLDLGYNQLKYLL--ADELEDLKKLETLLLDGNHFPVILEKSF-SSQFKLQVLCLKRNRLAKVT-TTAFTNLTNL 335 (497)
Q Consensus 260 l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~~~~~~~~~~-~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~L 335 (497)
+++++.||++.|-+..+. ......+++|+.|+++.|++........ ..++.|+.|.++.|.++.-. ......+|+|
T Consensus 145 ~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl 224 (505)
T KOG3207|consen 145 LPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSL 224 (505)
T ss_pred CCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcH
Confidence 455555555555544321 2233456666666666665443221111 13456677777777665211 1234556777
Q ss_pred CEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCCcCC--cc----cccCCCcC
Q psy10289 336 IELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTDIP--KG----LFKMNPHL 409 (497)
Q Consensus 336 ~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~l~--~~----~~~~~~~L 409 (497)
+.|++.+|....+......-.. .|++|+|++|++-..+.......++.|+.|+++.+++.+|. +. .-..+++|
T Consensus 225 ~~L~L~~N~~~~~~~~~~~i~~-~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL 303 (505)
T KOG3207|consen 225 EVLYLEANEIILIKATSTKILQ-TLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKL 303 (505)
T ss_pred HHhhhhcccccceecchhhhhh-HHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccc
Confidence 7777777742222222222222 37777777777553433345566777777777777766542 21 01345777
Q ss_pred cEEeCcCCCCcccch-hhhccCCCCCEEECCCCccccc
Q psy10289 410 QFLNLSGNNLQDIHN-LLYQSNIKLTHLDLSRNKFKGF 446 (497)
Q Consensus 410 ~~L~Ls~n~l~~~~~-~~~~~~~~L~~L~l~~n~l~~~ 446 (497)
+.|+++.|+|.++.. ..+..+++|+.+.+..|.++.-
T Consensus 304 ~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 304 EYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred eeeecccCccccccccchhhccchhhhhhccccccccc
Confidence 888888887766543 2334466777777777766653
No 28
>KOG1909|consensus
Probab=99.20 E-value=4.7e-12 Score=114.79 Aligned_cols=162 Identities=24% Similarity=0.247 Sum_probs=78.6
Q ss_pred cCCCCCCEEeccCCCCCccCh----hhhcCCccccEEEcCCCCCcccCcc-------------cccCCCCccEEEccCCC
Q psy10289 210 LKLSKLKSLDLSYNDIVEINP----EIFKDIQELKTFKCRSCGLENINPM-------------MYSILADLIYLDLGYNQ 272 (497)
Q Consensus 210 ~~l~~L~~L~l~~n~i~~~~~----~~~~~~~~L~~L~l~~~~l~~~~~~-------------~~~~l~~L~~L~l~~n~ 272 (497)
..+++|+++|||+|.+..-.. ..+..+..|+.|.+.+|++...... ....-+.|+++...+|+
T Consensus 89 ~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNr 168 (382)
T KOG1909|consen 89 LGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNR 168 (382)
T ss_pred hcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccc
Confidence 344455555555554433221 2233445555555555555432221 12234566677777666
Q ss_pred CCccCh----hhhcCCccCceeeccCCcCCCcC----ccccCCCCCccEEEccCCccccc----ccccccCCCCCCEEEC
Q psy10289 273 LKYLLA----DELEDLKKLETLLLDGNHFPVIL----EKSFSSQFKLQVLCLKRNRLAKV----TTTAFTNLTNLIELDI 340 (497)
Q Consensus 273 l~~~~~----~~~~~l~~L~~L~l~~n~~~~~~----~~~~~~~~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l 340 (497)
+..... ..|...+.|+.+.+..|.+.... ...+..+++|+.|||.+|.++.. ....++.+++|++|++
T Consensus 169 len~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l 248 (382)
T KOG1909|consen 169 LENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNL 248 (382)
T ss_pred cccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecc
Confidence 653322 33445566666666666554332 12344566666666666655422 1233455556666666
Q ss_pred cCCCCCccCcccccc----cccCCCEEEcCCCcCC
Q psy10289 341 SYNKLDRLEVASFDP----IENSLRDLKISGNNIQ 371 (497)
Q Consensus 341 ~~n~l~~~~~~~~~~----~~~~L~~L~ls~n~i~ 371 (497)
++|.+......++.. ..++|+.+.+.+|.|+
T Consensus 249 ~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 249 GDCLLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred cccccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 666555443322211 1112555555555554
No 29
>KOG3207|consensus
Probab=99.15 E-value=1.1e-11 Score=115.49 Aligned_cols=209 Identities=23% Similarity=0.293 Sum_probs=117.2
Q ss_pred CCCCCCcEEeccCCCCccCCc-ccccCCcCCcEEeccCCCCCCCCh--hhhcCCCCCCEEeccCCCCCccCh-hhhcCCc
Q psy10289 162 KGMMNLQELYLDFNKIESIPS-SVFMHLSDLRVLSLAHNRISKLAP--RLFLKLSKLKSLDLSYNDIVEINP-EIFKDIQ 237 (497)
Q Consensus 162 ~~l~~L~~L~L~~n~~~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~--~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~~~ 237 (497)
+++.+|+.+.|.++.+...+. .....|++++.|++++|-+....+ .....+++|+.|+++.|++..... ..-..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 456788888888888776553 344678888899998887776533 334677888888888887643211 1122456
Q ss_pred cccEEEcCCCCCcccC-cccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCc-cccCCCCCccEEE
Q psy10289 238 ELKTFKCRSCGLENIN-PMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILE-KSFSSQFKLQVLC 315 (497)
Q Consensus 238 ~L~~L~l~~~~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~-~~~~~~~~L~~L~ 315 (497)
.|+.|.++.|+++.-. ......+++|+.|++..|...........-++.|++|++++|.+..... ...+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 6777777777776211 1223346667777776664333333334445566666666666544321 2234456666666
Q ss_pred ccCCcccccccccc------cCCCCCCEEECcCCCCCccC-cccccccccCCCEEEcCCCcCC
Q psy10289 316 LKRNRLAKVTTTAF------TNLTNLIELDISYNKLDRLE-VASFDPIENSLRDLKISGNNIQ 371 (497)
Q Consensus 316 l~~n~l~~~~~~~~------~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~~L~~L~ls~n~i~ 371 (497)
++.+.+..+..... ..+++|++|++..|++.+.. ...+..+++ |+.|.+..|.++
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~n-lk~l~~~~n~ln 339 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLEN-LKHLRITLNYLN 339 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccch-hhhhhccccccc
Confidence 66665554322111 23455666666666553322 111222222 555555555543
No 30
>KOG1259|consensus
Probab=99.12 E-value=5.1e-12 Score=112.15 Aligned_cols=137 Identities=28% Similarity=0.349 Sum_probs=103.0
Q ss_pred cccCCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCC
Q psy10289 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDL 191 (497)
Q Consensus 112 ~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L 191 (497)
.+.....|+++|+++|.|+.+.. ...-.|.++.|++++|.+..+. .+..+++|+.|||++|.++.+.. +-..+-++
T Consensus 279 ~~dTWq~LtelDLS~N~I~~iDE-SvKL~Pkir~L~lS~N~i~~v~--nLa~L~~L~~LDLS~N~Ls~~~G-wh~KLGNI 354 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLITQIDE-SVKLAPKLRRLILSQNRIRTVQ--NLAELPQLQLLDLSGNLLAECVG-WHLKLGNI 354 (490)
T ss_pred ecchHhhhhhccccccchhhhhh-hhhhccceeEEeccccceeeeh--hhhhcccceEeecccchhHhhhh-hHhhhcCE
Confidence 44556788889999998888753 4556788999999999888874 37788889999999998887653 33467788
Q ss_pred cEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccCh-hhhcCCccccEEEcCCCCCcccCc
Q psy10289 192 RVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINP-EIFKDIQELKTFKCRSCGLENINP 254 (497)
Q Consensus 192 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~~~~L~~L~l~~~~l~~~~~ 254 (497)
++|.+++|.+..+ ..+..+-+|..||+++|+|..+.. ..+++++.|+.+.+.+|.+..++.
T Consensus 355 KtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 355 KTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred eeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 8889988888766 345667788888888888876543 346777777777777777765543
No 31
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.12 E-value=3.7e-11 Score=84.11 Aligned_cols=61 Identities=34% Similarity=0.489 Sum_probs=57.7
Q ss_pred CCCCEEecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccchhhhccCCCCCEEECCCCcc
Q psy10289 383 VKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443 (497)
Q Consensus 383 ~~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l 443 (497)
++|+.|++++|+++.+|.+.|.++++|++|++++|+++.+++.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5789999999999999999999999999999999999999999999999999999999975
No 32
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.06 E-value=1.6e-10 Score=80.93 Aligned_cols=61 Identities=33% Similarity=0.478 Sum_probs=42.2
Q ss_pred CCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCC
Q psy10289 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKI 177 (497)
Q Consensus 117 ~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~ 177 (497)
|+|++|++++|+++.++..+|.++++|++|++++|+++.+.+.+|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3566777777777777666777777777777777777777666677777777777766653
No 33
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.03 E-value=4.4e-10 Score=111.42 Aligned_cols=199 Identities=31% Similarity=0.451 Sum_probs=132.1
Q ss_pred EEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCc-CCcEEeccCCCCCCCChhhhcCCCCCCEEeccCC
Q psy10289 145 YLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLS-DLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYN 223 (497)
Q Consensus 145 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~-~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n 223 (497)
.++...+.+..-. .....++.++.+++.+|.++.+++.. .... +|+.|++++|++..+ +..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~~i~~~~-~~~~~nL~~L~l~~N~i~~l-~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNITDIPPLI-GLLKSNLKELDLSDNKIESL-PSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccccCcccc-ccchhhcccccccccchhhh-hhhhhccccccccccCCc
Confidence 4666666653221 22344567777888888777777643 3332 788888888877766 344567778888888888
Q ss_pred CCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCcc
Q psy10289 224 DIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEK 303 (497)
Q Consensus 224 ~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 303 (497)
++.++++. ....+.|+.|++++|.+..++... .....|+++.+++|.+.. .+..+..+.++..+.+.+|++... +.
T Consensus 174 ~l~~l~~~-~~~~~~L~~L~ls~N~i~~l~~~~-~~~~~L~~l~~~~N~~~~-~~~~~~~~~~l~~l~l~~n~~~~~-~~ 249 (394)
T COG4886 174 DLSDLPKL-LSNLSNLNNLDLSGNKISDLPPEI-ELLSALEELDLSNNSIIE-LLSSLSNLKNLSGLELSNNKLEDL-PE 249 (394)
T ss_pred hhhhhhhh-hhhhhhhhheeccCCccccCchhh-hhhhhhhhhhhcCCccee-cchhhhhcccccccccCCceeeec-cc
Confidence 87777553 224667777777777777776532 224557788888874332 234566777777777777766553 34
Q ss_pred ccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCccc
Q psy10289 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352 (497)
Q Consensus 304 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 352 (497)
.+..++++++|++++|.++.+.. +....+++.|+++++.+....+..
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 56667778888888888877766 677788888888888776654443
No 34
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.01 E-value=4.6e-10 Score=111.25 Aligned_cols=198 Identities=27% Similarity=0.405 Sum_probs=109.6
Q ss_pred CEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCC-CccEEEccCCCCCccChhhhcCCccCceeeccC
Q psy10289 216 KSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA-DLIYLDLGYNQLKYLLADELEDLKKLETLLLDG 294 (497)
Q Consensus 216 ~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 294 (497)
..+++..+.+..-... ....+.++.+.+.++.++.+++... ... +|+.|++++|.+..+. ..+..+++|+.|+++.
T Consensus 96 ~~l~~~~~~~~~~~~~-~~~~~~l~~L~l~~n~i~~i~~~~~-~~~~nL~~L~l~~N~i~~l~-~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 96 PSLDLNLNRLRSNISE-LLELTNLTSLDLDNNNITDIPPLIG-LLKSNLKELDLSDNKIESLP-SPLRNLPNLKNLDLSF 172 (394)
T ss_pred ceeeccccccccCchh-hhcccceeEEecCCcccccCccccc-cchhhcccccccccchhhhh-hhhhccccccccccCC
Confidence 3577777766332222 3345677888888888877766432 232 6777777777776542 3456677777777777
Q ss_pred CcCCCcCccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcc
Q psy10289 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSD 374 (497)
Q Consensus 295 n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~ 374 (497)
|++..+.+. ....+.|+.|++++|++..++.. ......|+++.+++|..... ...+..... +..+.+.+|.+. .
T Consensus 173 N~l~~l~~~-~~~~~~L~~L~ls~N~i~~l~~~-~~~~~~L~~l~~~~N~~~~~-~~~~~~~~~-l~~l~l~~n~~~--~ 246 (394)
T COG4886 173 NDLSDLPKL-LSNLSNLNNLDLSGNKISDLPPE-IELLSALEELDLSNNSIIEL-LSSLSNLKN-LSGLELSNNKLE--D 246 (394)
T ss_pred chhhhhhhh-hhhhhhhhheeccCCccccCchh-hhhhhhhhhhhhcCCcceec-chhhhhccc-ccccccCCceee--e
Confidence 776664332 22455666666666666666543 12334466666666632221 122233333 445555555543 2
Q ss_pred hhhHhhcCCCCCEEecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccch
Q psy10289 375 VKNVLDKLVKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHN 424 (497)
Q Consensus 375 ~~~~~~~~~~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~~ 424 (497)
++..+..+++++.|++++|.+++++. +....+++.|++++|.+..+.+
T Consensus 247 ~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 247 LPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred ccchhccccccceecccccccccccc--ccccCccCEEeccCccccccch
Confidence 23444555556666666665555554 3455556666666655555444
No 35
>KOG0532|consensus
Probab=99.01 E-value=1.9e-11 Score=117.49 Aligned_cols=175 Identities=25% Similarity=0.337 Sum_probs=122.2
Q ss_pred CCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcC
Q psy10289 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCR 245 (497)
Q Consensus 166 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~ 245 (497)
--...|++.|++..+|.. +..+..|+.+.+..|.+..+ |.++.++..|.+++++.|++...+...+ .++ |+.|-++
T Consensus 76 dt~~aDlsrNR~~elp~~-~~~f~~Le~liLy~n~~r~i-p~~i~~L~~lt~l~ls~NqlS~lp~~lC-~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFSELPEE-ACAFVSLESLILYHNCIRTI-PEAICNLEALTFLDLSSNQLSHLPDGLC-DLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccccCchH-HHHHHHHHHHHHHhccceec-chhhhhhhHHHHhhhccchhhcCChhhh-cCc-ceeEEEe
Confidence 344566677777776654 35566677777777777666 5556677777777777777776655432 233 7777777
Q ss_pred CCCCcccCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccccc
Q psy10289 246 SCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325 (497)
Q Consensus 246 ~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 325 (497)
+|+++.++... +....|..||.+.|.+... +..+.++.+|+.|.+..|.+..+.++ +..+ .|..||++.|++..++
T Consensus 152 NNkl~~lp~~i-g~~~tl~~ld~s~nei~sl-psql~~l~slr~l~vrRn~l~~lp~E-l~~L-pLi~lDfScNkis~iP 227 (722)
T KOG0532|consen 152 NNKLTSLPEEI-GLLPTLAHLDVSKNEIQSL-PSQLGYLTSLRDLNVRRNHLEDLPEE-LCSL-PLIRLDFSCNKISYLP 227 (722)
T ss_pred cCccccCCccc-ccchhHHHhhhhhhhhhhc-hHHhhhHHHHHHHHHhhhhhhhCCHH-HhCC-ceeeeecccCceeecc
Confidence 77777765544 3677888888888887764 44577788888888888887775543 3433 5788888888888775
Q ss_pred cccccCCCCCCEEECcCCCCCccC
Q psy10289 326 TTAFTNLTNLIELDISYNKLDRLE 349 (497)
Q Consensus 326 ~~~~~~~~~L~~L~l~~n~l~~~~ 349 (497)
. .|.+|+.|++|.|..|.++.-+
T Consensus 228 v-~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 228 V-DFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred h-hhhhhhhheeeeeccCCCCCCh
Confidence 5 4888888888888888887644
No 36
>KOG0531|consensus
Probab=99.00 E-value=5.6e-11 Score=117.99 Aligned_cols=217 Identities=30% Similarity=0.422 Sum_probs=121.4
Q ss_pred CCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEE
Q psy10289 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVL 194 (497)
Q Consensus 115 ~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L 194 (497)
.+..++.+.+..|.+..+. ..+..+++|..|++.+|+|..+.. .+..+++|++|++++|.|+.+.. +..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~~~-~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAKIL-NHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhhhh-cccccccceeeeeccccchhhccc-chhhhhcchheeccccccccccc--hhhccchhhh
Confidence 4556666667777666532 335566777777777777776632 15567777777777777777665 4566667777
Q ss_pred eccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCCCCC
Q psy10289 195 SLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLK 274 (497)
Q Consensus 195 ~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~ 274 (497)
++++|.+..+ ..+..+..|+.+++++|++..+.......+.+++.+.+.+|.+..+... ..+..+..+++..|.+.
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i~~~--~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREIEGL--DLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhcccch--HHHHHHHHhhcccccce
Confidence 7777777766 2345567777777777777766551034456666666666666554332 12233444455555554
Q ss_pred ccChhhhcCCcc--CceeeccCCcCCCcCccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCC
Q psy10289 275 YLLADELEDLKK--LETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344 (497)
Q Consensus 275 ~~~~~~~~~l~~--L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 344 (497)
.+. .+..... |+.+++++|.+.... ..+..+..+..+++.+|++..... +...+.+..+....+.
T Consensus 222 ~~~--~l~~~~~~~L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~n~~~~~~~--~~~~~~~~~~~~~~~~ 288 (414)
T KOG0531|consen 222 KLE--GLNELVMLHLRELYLSGNRISRSP-EGLENLKNLPVLDLSSNRISNLEG--LERLPKLSELWLNDNK 288 (414)
T ss_pred ecc--CcccchhHHHHHHhcccCcccccc-ccccccccccccchhhcccccccc--ccccchHHHhccCcch
Confidence 321 1222222 556666666554431 223344455555555555544322 2333444444444444
No 37
>KOG4658|consensus
Probab=98.96 E-value=8.8e-10 Score=117.03 Aligned_cols=128 Identities=28% Similarity=0.351 Sum_probs=82.0
Q ss_pred CCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCc--CccCCccccCCCCCCcEEeccCC-CCccCCcccccCCcCCcE
Q psy10289 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN--ITSLLDYNFKGMMNLQELYLDFN-KIESIPSSVFMHLSDLRV 193 (497)
Q Consensus 117 ~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~--l~~~~~~~~~~l~~L~~L~L~~n-~~~~~~~~~~~~l~~L~~ 193 (497)
...+...+-++.+..+... ..+++|++|-+..|. +..+....|..++.|+.||+++| .+..+|.. .+.+-+||+
T Consensus 523 ~~~rr~s~~~~~~~~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~-I~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSS-IGELVHLRY 599 (889)
T ss_pred hheeEEEEeccchhhccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChH-Hhhhhhhhc
Confidence 5566666666666555422 244567777777765 55555555677777777777765 44556654 466777777
Q ss_pred EeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCC
Q psy10289 194 LSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCG 248 (497)
Q Consensus 194 L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~ 248 (497)
|+++++.+..+ |..+.++.+|.+|++..+......+.....+++|++|.+....
T Consensus 600 L~L~~t~I~~L-P~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 600 LDLSDTGISHL-PSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccCCCcccc-chHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 77777777766 5667777777777777665444445555667777777765543
No 38
>KOG0531|consensus
Probab=98.96 E-value=1.7e-10 Score=114.60 Aligned_cols=226 Identities=26% Similarity=0.328 Sum_probs=168.1
Q ss_pred cccCCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCC
Q psy10289 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDL 191 (497)
Q Consensus 112 ~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L 191 (497)
.+..+++++.+++.+|.|..+.. .+..+++|++|++++|.|+.+. .+..++.|+.|++.+|.+..+.. |..+..|
T Consensus 90 ~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~~~--~~~l~~L 164 (414)
T KOG0531|consen 90 HLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISDISG--LESLKSL 164 (414)
T ss_pred ccccccceeeeeccccchhhccc-chhhhhcchheecccccccccc--chhhccchhhheeccCcchhccC--Cccchhh
Confidence 47788999999999999999863 2678899999999999999984 46788889999999999999876 5678999
Q ss_pred cEEeccCCCCCCCCh-hhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccC
Q psy10289 192 RVLSLAHNRISKLAP-RLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGY 270 (497)
Q Consensus 192 ~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~ 270 (497)
+.+++++|++..+.+ . ...+.+++.+.+.+|.+..+.. +..+..+..+++..|.+..+.+.......+|+++++++
T Consensus 165 ~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~--~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~ 241 (414)
T KOG0531|consen 165 KLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEG--LDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSG 241 (414)
T ss_pred hcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccc--hHHHHHHHHhhcccccceeccCcccchhHHHHHHhccc
Confidence 999999999998855 2 4678899999999999887754 33345555668888888766542211111389999999
Q ss_pred CCCCccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCccccc---ccc-cccCCCCCCEEECcCCCCC
Q psy10289 271 NQLKYLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV---TTT-AFTNLTNLIELDISYNKLD 346 (497)
Q Consensus 271 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~---~~~-~~~~~~~L~~L~l~~n~l~ 346 (497)
|.+.... ..+..+..+..+++..+.+.... .+...+.+..+....+.+... ... .....+.++.+.+.++...
T Consensus 242 n~i~~~~-~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (414)
T KOG0531|consen 242 NRISRSP-EGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIR 318 (414)
T ss_pred Ccccccc-ccccccccccccchhhccccccc--cccccchHHHhccCcchhcchhhhhccccccccccccccccccCccc
Confidence 9887542 45777888999999988877653 233445566666666665421 111 1445677777777777665
Q ss_pred cc
Q psy10289 347 RL 348 (497)
Q Consensus 347 ~~ 348 (497)
..
T Consensus 319 ~~ 320 (414)
T KOG0531|consen 319 KI 320 (414)
T ss_pred cc
Confidence 43
No 39
>KOG4658|consensus
Probab=98.82 E-value=4.1e-09 Score=112.00 Aligned_cols=204 Identities=25% Similarity=0.283 Sum_probs=137.0
Q ss_pred CCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCC--CccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCC
Q psy10289 139 GVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK--IESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLK 216 (497)
Q Consensus 139 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~--~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~ 216 (497)
.....+...+-+|.+..+... ..++.|++|-+..|. +..++..+|..++.|++||+++|.--...|..++.+-+|+
T Consensus 521 ~~~~~rr~s~~~~~~~~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIEHIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred chhheeEEEEeccchhhccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 446788999988888776432 345689999999996 7888888899999999999998875455588899999999
Q ss_pred EEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCCCCC--ccChhhhcCCccCceeeccC
Q psy10289 217 SLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLK--YLLADELEDLKKLETLLLDG 294 (497)
Q Consensus 217 ~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~l~~ 294 (497)
+|+++++.+..+| ..++++..|.+|++..+......+.....+.+|++|.+...... ......+..+..|+.+....
T Consensus 599 yL~L~~t~I~~LP-~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~ 677 (889)
T KOG4658|consen 599 YLDLSDTGISHLP-SGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITI 677 (889)
T ss_pred cccccCCCccccc-hHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeec
Confidence 9999999999885 45889999999999988766666666677999999998766422 22233344455555544433
Q ss_pred CcCCCcCccccCCCCCcc----EEEccCCcccccccccccCCCCCCEEECcCCCCCcc
Q psy10289 295 NHFPVILEKSFSSQFKLQ----VLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348 (497)
Q Consensus 295 n~~~~~~~~~~~~~~~L~----~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 348 (497)
... . ....+...+.|. .+.+.++... .....+..+.+|+.|.+.++...+.
T Consensus 678 ~s~-~-~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~ 732 (889)
T KOG4658|consen 678 SSV-L-LLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEI 732 (889)
T ss_pred chh-H-hHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchh
Confidence 221 0 001111222222 2222222211 1223355677777777777766543
No 40
>KOG0532|consensus
Probab=98.81 E-value=2.5e-10 Score=109.98 Aligned_cols=176 Identities=23% Similarity=0.310 Sum_probs=109.5
Q ss_pred cccEEEcCCCCCcccCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEcc
Q psy10289 238 ELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLK 317 (497)
Q Consensus 238 ~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~ 317 (497)
.-...+++.|.+..++... ..+..|+.+.+..|.+.. .+.++.++..|+.++++.|++..... .+..+ -|+.|-++
T Consensus 76 dt~~aDlsrNR~~elp~~~-~~f~~Le~liLy~n~~r~-ip~~i~~L~~lt~l~ls~NqlS~lp~-~lC~l-pLkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFSELPEEA-CAFVSLESLILYHNCIRT-IPEAICNLEALTFLDLSSNQLSHLPD-GLCDL-PLKVLIVS 151 (722)
T ss_pred chhhhhccccccccCchHH-HHHHHHHHHHHHhcccee-cchhhhhhhHHHHhhhccchhhcCCh-hhhcC-cceeEEEe
Confidence 3345566667666665432 335566666666666654 34556677777777777777665433 33333 36777777
Q ss_pred CCcccccccccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCCc
Q psy10289 318 RNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTD 397 (497)
Q Consensus 318 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~ 397 (497)
+|+++.++.+ +....+|..||.+.|.+..++.. +..+.. |+.|.+..|++. .+|..+.. -.|..||++.|++..
T Consensus 152 NNkl~~lp~~-ig~~~tl~~ld~s~nei~slpsq-l~~l~s-lr~l~vrRn~l~--~lp~El~~-LpLi~lDfScNkis~ 225 (722)
T KOG0532|consen 152 NNKLTSLPEE-IGLLPTLAHLDVSKNEIQSLPSQ-LGYLTS-LRDLNVRRNHLE--DLPEELCS-LPLIRLDFSCNKISY 225 (722)
T ss_pred cCccccCCcc-cccchhHHHhhhhhhhhhhchHH-hhhHHH-HHHHHHhhhhhh--hCCHHHhC-CceeeeecccCceee
Confidence 7777766554 44667777777777777666443 233333 667777776654 44555553 346777777777777
Q ss_pred CCcccccCCCcCcEEeCcCCCCcccch
Q psy10289 398 IPKGLFKMNPHLQFLNLSGNNLQDIHN 424 (497)
Q Consensus 398 l~~~~~~~~~~L~~L~Ls~n~l~~~~~ 424 (497)
||.. |..++.|++|.|.+|.++.-+.
T Consensus 226 iPv~-fr~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 226 LPVD-FRKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred cchh-hhhhhhheeeeeccCCCCCChH
Confidence 7765 5667777777777777776444
No 41
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.80 E-value=1.1e-08 Score=84.10 Aligned_cols=122 Identities=25% Similarity=0.450 Sum_probs=58.4
Q ss_pred cccCCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCC
Q psy10289 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDL 191 (497)
Q Consensus 112 ~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L 191 (497)
+|.++++|+.+.+.. .++.++..+|.++++|+.+.+.++ +..+...+|.++++++.+.+.+ .+..++...|..++++
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 566666777777663 566666666777666777776653 6666666666666677777654 4555666666666666
Q ss_pred cEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccc
Q psy10289 192 RVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQEL 239 (497)
Q Consensus 192 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L 239 (497)
+.+.+..+ +..+....|.++ +|+.+.+.. .+..++..+|.++++|
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 66666554 555545556665 666666654 4555555566655554
No 42
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.76 E-value=2.1e-08 Score=82.41 Aligned_cols=128 Identities=20% Similarity=0.388 Sum_probs=84.1
Q ss_pred ccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhc
Q psy10289 131 AIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFL 210 (497)
Q Consensus 131 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~ 210 (497)
.++..+|.++++|+.+.+.. .+..+...+|.++.+|+.+.+.++ +..++..+|.++++++.+.+.+ .+..+....|.
T Consensus 2 ~i~~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~ 78 (129)
T PF13306_consen 2 SIGNNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFS 78 (129)
T ss_dssp EE-TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTT
T ss_pred EECHHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccc
Confidence 56778999999999999975 688899999999999999999885 8899999999998999999976 66667677888
Q ss_pred CCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccCcccccCCCCcc
Q psy10289 211 KLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264 (497)
Q Consensus 211 ~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~ 264 (497)
.+++|+.+++..+ +..+....|.++ .++.+.+.. .+..+....|.++++|+
T Consensus 79 ~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l~ 129 (129)
T PF13306_consen 79 NCTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKLK 129 (129)
T ss_dssp T-TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG------
T ss_pred ccccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccCC
Confidence 8999999999875 778888889887 899999886 77788888888887764
No 43
>KOG2120|consensus
Probab=98.73 E-value=3.1e-10 Score=100.87 Aligned_cols=179 Identities=23% Similarity=0.219 Sum_probs=129.4
Q ss_pred CCccEEEccCCCCCc-cChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCc-cccccc-ccccCCCCCCE
Q psy10289 261 ADLIYLDLGYNQLKY-LLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNR-LAKVTT-TAFTNLTNLIE 337 (497)
Q Consensus 261 ~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~-~~~~~~~~L~~ 337 (497)
+.++.+|+++..++. .....++.|++|+.|.+.++++.+.....++.-.+|+.++++.+. ++.... -.+..|+.|.+
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 458888888887763 233557788899999999998888777777888899999998764 433222 34678999999
Q ss_pred EECcCCCCCccCcc-cccccccCCCEEEcCCCc--CCCcchhhHhhcCCCCCEEecCCCc-CCcCCcccccCCCcCcEEe
Q psy10289 338 LDISYNKLDRLEVA-SFDPIENSLRDLKISGNN--IQLSDVKNVLDKLVKLKALSIADMN-YTDIPKGLFKMNPHLQFLN 413 (497)
Q Consensus 338 L~l~~n~l~~~~~~-~~~~~~~~L~~L~ls~n~--i~~~~~~~~~~~~~~L~~L~l~~n~-i~~l~~~~~~~~~~L~~L~ 413 (497)
|++++|.+...... ..+.....|+.|+++|+. +....+......+++|.+||+++|. ++.--...|-.++-|+.|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 99999987653322 233444459999999986 4444566667889999999999984 4332222345678999999
Q ss_pred CcCCCCcccchhh---hccCCCCCEEECCCC
Q psy10289 414 LSGNNLQDIHNLL---YQSNIKLTHLDLSRN 441 (497)
Q Consensus 414 Ls~n~l~~~~~~~---~~~~~~L~~L~l~~n 441 (497)
++.|- +++|.. +...|+|.+||+.++
T Consensus 345 lsRCY--~i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 345 LSRCY--DIIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhhc--CCChHHeeeeccCcceEEEEeccc
Confidence 98873 344433 456899999999885
No 44
>PLN03150 hypothetical protein; Provisional
Probab=98.64 E-value=6.7e-08 Score=100.57 Aligned_cols=106 Identities=24% Similarity=0.344 Sum_probs=56.0
Q ss_pred CceeeccCCcCCCcCccccCCCCCccEEEccCCcccccccccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcC
Q psy10289 287 LETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKIS 366 (497)
Q Consensus 287 L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls 366 (497)
++.|++++|.+.+..|..+..+++|+.|+|++|.+.+..+..+..+++|+.|++++|++.+..+..+..+++ |+.|+++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~-L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS-LRILNLN 498 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCC-CCEEECc
Confidence 455555555555555555555555555555555555444444555555555555555555544555555544 5555555
Q ss_pred CCcCCCcchhhHhhc-CCCCCEEecCCCc
Q psy10289 367 GNNIQLSDVKNVLDK-LVKLKALSIADMN 394 (497)
Q Consensus 367 ~n~i~~~~~~~~~~~-~~~L~~L~l~~n~ 394 (497)
+|.++ +.+|..+.. ..++..+++.+|.
T Consensus 499 ~N~l~-g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 499 GNSLS-GRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CCccc-ccCChHHhhccccCceEEecCCc
Confidence 55554 233443332 1244455555553
No 45
>PLN03150 hypothetical protein; Provisional
Probab=98.61 E-value=9.4e-08 Score=99.50 Aligned_cols=108 Identities=19% Similarity=0.233 Sum_probs=91.7
Q ss_pred CCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEecc
Q psy10289 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLS 221 (497)
Q Consensus 142 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 221 (497)
.++.|+|++|.+.+..+..+..+++|+.|+|++|.+....+..+..+++|+.|++++|++++..|..+.++++|++|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999998888889999999999999999985444457899999999999999998888999999999999999
Q ss_pred CCCCCccChhhhcCC-ccccEEEcCCCCC
Q psy10289 222 YNDIVEINPEIFKDI-QELKTFKCRSCGL 249 (497)
Q Consensus 222 ~n~i~~~~~~~~~~~-~~L~~L~l~~~~l 249 (497)
+|.+.+..|..+... .++..+++.+|..
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCcc
Confidence 999987666666553 4567788887754
No 46
>KOG2982|consensus
Probab=98.54 E-value=3.2e-08 Score=88.32 Aligned_cols=186 Identities=22% Similarity=0.209 Sum_probs=101.7
Q ss_pred CCCccEEEccCCCCCcc--ChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccc-cccccccCCCCCC
Q psy10289 260 LADLIYLDLGYNQLKYL--LADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAK-VTTTAFTNLTNLI 336 (497)
Q Consensus 260 l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~~~~L~ 336 (497)
++.++++|+.+|.+..+ ....+.++|.|+.|+++.|.+...+...-....+|+.|-|.+..+.- .....+..+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 34555666666665532 22334566666666666666554432222344566666666655431 2223355666677
Q ss_pred EEECcCCCCCc--cCcccccccccCCCEEEcCCCcCCC-cchhhHhhcCCCCCEEecCCCcCCcCCc-ccccCCCcCcEE
Q psy10289 337 ELDISYNKLDR--LEVASFDPIENSLRDLKISGNNIQL-SDVKNVLDKLVKLKALSIADMNYTDIPK-GLFKMNPHLQFL 412 (497)
Q Consensus 337 ~L~l~~n~l~~--~~~~~~~~~~~~L~~L~ls~n~i~~-~~~~~~~~~~~~L~~L~l~~n~i~~l~~-~~~~~~~~L~~L 412 (497)
+|.++.|.+.. ++..........++++..-+|.... ......-..++++..+.+..|.+..... .-+..+|.+..|
T Consensus 150 elHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~L 229 (418)
T KOG2982|consen 150 ELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCL 229 (418)
T ss_pred hhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhh
Confidence 77777764332 2222333333236666666665321 0111223445777777777776654432 224556677777
Q ss_pred eCcCCCCcccch-hhhccCCCCCEEECCCCcccc
Q psy10289 413 NLSGNNLQDIHN-LLYQSNIKLTHLDLSRNKFKG 445 (497)
Q Consensus 413 ~Ls~n~l~~~~~-~~~~~~~~L~~L~l~~n~l~~ 445 (497)
+|+.++|..... +.+..++.|+.|.+++|++..
T Consensus 230 nL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 230 NLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred hhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 787777776543 456667777777787777654
No 47
>KOG4579|consensus
Probab=98.44 E-value=1.4e-08 Score=80.04 Aligned_cols=135 Identities=22% Similarity=0.239 Sum_probs=100.5
Q ss_pred CCCEEECcCCCCCccCcc--cccccccCCCEEEcCCCcCCCcchhhHh-hcCCCCCEEecCCCcCCcCCcccccCCCcCc
Q psy10289 334 NLIELDISYNKLDRLEVA--SFDPIENSLRDLKISGNNIQLSDVKNVL-DKLVKLKALSIADMNYTDIPKGLFKMNPHLQ 410 (497)
Q Consensus 334 ~L~~L~l~~n~l~~~~~~--~~~~~~~~L~~L~ls~n~i~~~~~~~~~-~~~~~L~~L~l~~n~i~~l~~~~~~~~~~L~ 410 (497)
.+..++++.|++..+... .+..... |+..++++|.+. ++|..| ..++.++.|++++|.|.++|.. +..++.|+
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~e-l~~i~ls~N~fk--~fp~kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr 103 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYE-LTKISLSDNGFK--KFPKKFTIKFPTATTLNLANNEISDVPEE-LAAMPALR 103 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCce-EEEEecccchhh--hCCHHHhhccchhhhhhcchhhhhhchHH-HhhhHHhh
Confidence 445667777766544321 1222222 777888888776 445444 4456889999999999999988 78899999
Q ss_pred EEeCcCCCCcccchhhhccCCCCCEEECCCCccccccCCCcccCCchhHHHHhhhhhHhhhhcc
Q psy10289 411 FLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAAKNSFALQSSMG 474 (497)
Q Consensus 411 ~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 474 (497)
.|+++.|++...+...+ .+.++-.||.-+|.+..||-. ..++....+.++.++|++-.|.++
T Consensus 104 ~lNl~~N~l~~~p~vi~-~L~~l~~Lds~~na~~eid~d-l~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 104 SLNLRFNPLNAEPRVIA-PLIKLDMLDSPENARAEIDVD-LFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred hcccccCccccchHHHH-HHHhHHHhcCCCCccccCcHH-HhccccHHHHHhcCCcccccCccc
Confidence 99999999998765544 488899999999999999988 556667778899999999666554
No 48
>KOG1859|consensus
Probab=98.43 E-value=3.1e-09 Score=105.41 Aligned_cols=197 Identities=26% Similarity=0.338 Sum_probs=115.3
Q ss_pred CCCceEEeecCCCCCCccccCccccCCCCCcEEEccCCCCCccCCCCCCCCC-CCCEEeccCCcCccC---Ccc---ccC
Q psy10289 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVP-SLRYLNLTHNNITSL---LDY---NFK 162 (497)
Q Consensus 90 ~~~~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~---~~~---~~~ 162 (497)
..+..+++.+.- ...-+.+-.+..++.|++|.+.++.+... ..+..+. .|++|.-+. .+..+ ... .+.
T Consensus 84 qkt~~lkl~~~p--a~~pt~pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~ 158 (1096)
T KOG1859|consen 84 QKTKVLKLLPSP--ARDPTEPISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICHN-SLDALRHVFASCGGDIS 158 (1096)
T ss_pred hhheeeeecccC--CCCCCCCceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhhc-cHHHHHHHHHHhccccc
Confidence 345566665441 12222244677788999999998887652 1222221 355544322 21111 000 011
Q ss_pred C---CCCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhhcCCccc
Q psy10289 163 G---MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQEL 239 (497)
Q Consensus 163 ~---l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L 239 (497)
+ .-.|.+.+.++|.++.+... +.-++.++.|+|++|+++.. ..+..+++|++||+++|.+..++.-...++. |
T Consensus 159 ns~~Wn~L~~a~fsyN~L~~mD~S-Lqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L 234 (1096)
T KOG1859|consen 159 NSPVWNKLATASFSYNRLVLMDES-LQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-L 234 (1096)
T ss_pred cchhhhhHhhhhcchhhHHhHHHH-HHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-h
Confidence 1 12466777777777665543 45567777788888877766 3567777788888888777776554334443 7
Q ss_pred cEEEcCCCCCcccCcccccCCCCccEEEccCCCCCccC-hhhhcCCccCceeeccCCcC
Q psy10289 240 KTFKCRSCGLENINPMMYSILADLIYLDLGYNQLKYLL-ADELEDLKKLETLLLDGNHF 297 (497)
Q Consensus 240 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~~ 297 (497)
+.|.+++|.++.+.. +.++.+|..||+++|-+.+.. -..+..+..|+.|++.||.+
T Consensus 235 ~~L~lrnN~l~tL~g--ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 235 QLLNLRNNALTTLRG--IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred eeeeecccHHHhhhh--HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 777788777765433 345677777788877665321 12244556677777777764
No 49
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.31 E-value=2.6e-07 Score=81.50 Aligned_cols=177 Identities=20% Similarity=0.094 Sum_probs=94.9
Q ss_pred cCCCCccEEEccCCCCCccCh----hhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCcccccccccccCCC
Q psy10289 258 SILADLIYLDLGYNQLKYLLA----DELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLT 333 (497)
Q Consensus 258 ~~l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~ 333 (497)
..|++|+..++|+|.+....+ +.++.-+.|++|.+++|.+..+.-.-++. .|.+ +..| .-..+-|
T Consensus 89 lkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigk--al~~--la~n-------KKaa~kp 157 (388)
T COG5238 89 LKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGK--ALFH--LAYN-------KKAADKP 157 (388)
T ss_pred hcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHH--HHHH--HHHH-------hhhccCC
Confidence 345566666666665543222 23445556666666666543322111110 0000 0011 0123456
Q ss_pred CCCEEECcCCCCCccCcccccccc---cCCCEEEcCCCcCCCcchh----hHhhcCCCCCEEecCCCcCCcCCc----cc
Q psy10289 334 NLIELDISYNKLDRLEVASFDPIE---NSLRDLKISGNNIQLSDVK----NVLDKLVKLKALSIADMNYTDIPK----GL 402 (497)
Q Consensus 334 ~L~~L~l~~n~l~~~~~~~~~~~~---~~L~~L~ls~n~i~~~~~~----~~~~~~~~L~~L~l~~n~i~~l~~----~~ 402 (497)
.|+.++...|++..-+...++... ..|+.+.+.+|.|....+. ..+..+.+|+.||+.+|-++.... .+
T Consensus 158 ~Le~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~a 237 (388)
T COG5238 158 KLEVVICGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADA 237 (388)
T ss_pred CceEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHH
Confidence 788888888877655433332211 1377888888877643222 223466788888888887763222 22
Q ss_pred ccCCCcCcEEeCcCCCCcccchhhhc------cCCCCCEEECCCCcccc
Q psy10289 403 FKMNPHLQFLNLSGNNLQDIHNLLYQ------SNIKLTHLDLSRNKFKG 445 (497)
Q Consensus 403 ~~~~~~L~~L~Ls~n~l~~~~~~~~~------~~~~L~~L~l~~n~l~~ 445 (497)
...++.|+.|.+..|-++.-....+- ..|+|+.|-...|.+..
T Consensus 238 l~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 238 LCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRG 286 (388)
T ss_pred hcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcC
Confidence 34456788888888877665443221 25677777777775543
No 50
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.27 E-value=1.7e-07 Score=82.65 Aligned_cols=92 Identities=20% Similarity=0.157 Sum_probs=45.9
Q ss_pred CCCCCCEEECcCCCCCccCcc----cccccccCCCEEEcCCCcCCCcchhhHhh-----cCCCCCEEecCCCcCC-----
Q psy10289 331 NLTNLIELDISYNKLDRLEVA----SFDPIENSLRDLKISGNNIQLSDVKNVLD-----KLVKLKALSIADMNYT----- 396 (497)
Q Consensus 331 ~~~~L~~L~l~~n~l~~~~~~----~~~~~~~~L~~L~ls~n~i~~~~~~~~~~-----~~~~L~~L~l~~n~i~----- 396 (497)
.+++|+.||+..|.++..... ++..++. |+.|.+..|-++......++. ..++|..|-..+|.+.
T Consensus 212 y~~~LevLDlqDNtft~~gS~~La~al~~W~~-lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~ 290 (388)
T COG5238 212 YSHSLEVLDLQDNTFTLEGSRYLADALCEWNL-LRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIIL 290 (388)
T ss_pred HhCcceeeeccccchhhhhHHHHHHHhcccch-hhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceee
Confidence 345555555555554433221 2223333 555555555554333333322 2355555555555322
Q ss_pred --cCCcccccCCCcCcEEeCcCCCCcccc
Q psy10289 397 --DIPKGLFKMNPHLQFLNLSGNNLQDIH 423 (497)
Q Consensus 397 --~l~~~~~~~~~~L~~L~Ls~n~l~~~~ 423 (497)
.++...-.++|-|..|.+.+|++....
T Consensus 291 ~~~l~~~e~~~~p~L~~le~ngNr~~E~~ 319 (388)
T COG5238 291 DISLNEFEQDAVPLLVDLERNGNRIKELA 319 (388)
T ss_pred eechhhhhhcccHHHHHHHHccCcchhHH
Confidence 123222345677888888888887643
No 51
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.25 E-value=1e-06 Score=56.31 Aligned_cols=39 Identities=28% Similarity=0.380 Sum_probs=19.7
Q ss_pred cCcEEeCcCCCCcccchhhhccCCCCCEEECCCCcccccc
Q psy10289 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFD 447 (497)
Q Consensus 408 ~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 447 (497)
+|++|++++|+|+.+++ .+..+++|++|++++|++++++
T Consensus 2 ~L~~L~l~~N~i~~l~~-~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPP-ELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp T-SEEEETSSS-SSHGG-HGTTCTTSSEEEETSSCCSBEG
T ss_pred cceEEEccCCCCcccCc-hHhCCCCCCEEEecCCCCCCCc
Confidence 45555555555555543 2455555555555555555543
No 52
>KOG1644|consensus
Probab=98.23 E-value=1.9e-06 Score=72.95 Aligned_cols=81 Identities=28% Similarity=0.392 Sum_probs=34.6
Q ss_pred CCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCCh-hhhcCCCCCCEEecc
Q psy10289 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP-RLFLKLSKLKSLDLS 221 (497)
Q Consensus 143 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l~ 221 (497)
...+||++|.+..+ ..|..++.|.+|.+.+|.|+.|.+..-.-+++|+.|.+.+|.+..++. ..+..|++|++|.+-
T Consensus 44 ~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll 121 (233)
T KOG1644|consen 44 FDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLL 121 (233)
T ss_pred cceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeec
Confidence 34444444444433 234444444444444444444444433333444444444444433221 122334444444444
Q ss_pred CCCC
Q psy10289 222 YNDI 225 (497)
Q Consensus 222 ~n~i 225 (497)
+|.+
T Consensus 122 ~Npv 125 (233)
T KOG1644|consen 122 GNPV 125 (233)
T ss_pred CCch
Confidence 4433
No 53
>KOG2982|consensus
Probab=98.19 E-value=1.9e-06 Score=77.29 Aligned_cols=206 Identities=20% Similarity=0.195 Sum_probs=92.6
Q ss_pred CcCCcEEeccCCCCCCCCh--hhhcCCCCCCEEeccCCCCCccChhhhcCCccccEEEcCCCCCcccC-cccccCCCCcc
Q psy10289 188 LSDLRVLSLAHNRISKLAP--RLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELKTFKCRSCGLENIN-PMMYSILADLI 264 (497)
Q Consensus 188 l~~L~~L~l~~n~i~~~~~--~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~~~l~~~~-~~~~~~l~~L~ 264 (497)
+..++.+|+.+|.++.... ..+.+++.|+.|+++.|++.......-....+|++|-+.+..+..-. ...+..++.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 4566777777777665422 23456666777777766654422211123445666666655544221 12233344555
Q ss_pred EEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCCccccc--ccccccCCCCCCEEECcC
Q psy10289 265 YLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV--TTTAFTNLTNLIELDISY 342 (497)
Q Consensus 265 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~--~~~~~~~~~~L~~L~l~~ 342 (497)
+|+++.|.+.. +.++.+.+.. .-+.++++..-.|....- ....-+-++++..+.+..
T Consensus 150 elHmS~N~~rq--------------~n~Dd~c~e~-------~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e 208 (418)
T KOG2982|consen 150 ELHMSDNSLRQ--------------LNLDDNCIED-------WSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCE 208 (418)
T ss_pred hhhhccchhhh--------------hccccccccc-------cchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeec
Confidence 55555543221 1111111111 011233333333321100 001112245555555555
Q ss_pred CCCCccCc-ccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCCc-CCc-----ccccCCCcCcEEeCc
Q psy10289 343 NKLDRLEV-ASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTD-IPK-----GLFKMNPHLQFLNLS 415 (497)
Q Consensus 343 n~l~~~~~-~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~-l~~-----~~~~~~~~L~~L~Ls 415 (497)
|.+.+... ..+...+. +-.|+|+.++|....-.+.+..++.|..|.++++.+.+ +.. -+.+.++++++|+=+
T Consensus 209 ~PlK~~s~ek~se~~p~-~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLNGs 287 (418)
T KOG2982|consen 209 GPLKTESSEKGSEPFPS-LSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLNGS 287 (418)
T ss_pred CcccchhhcccCCCCCc-chhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEecCc
Confidence 55544322 22223332 55566666665544434555566666666666665431 110 123456677777654
No 54
>KOG4579|consensus
Probab=98.17 E-value=8.8e-08 Score=75.65 Aligned_cols=113 Identities=24% Similarity=0.276 Sum_probs=70.9
Q ss_pred CcEEEccCCCCCccCCC--CCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEec
Q psy10289 119 LEELHITNSFIPAIGFH--PFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196 (497)
Q Consensus 119 L~~L~l~~~~i~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l 196 (497)
+-.++|+.|.+-.+... .+.+...|+.+++++|.+...++..-..++.++++++++|.+..+|.. +..++.|+.|++
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr~lNl 107 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEE-LAAMPALRSLNL 107 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHH-HhhhHHhhhccc
Confidence 44566666665544321 123345666677777777766554444556677777777777777766 667777777777
Q ss_pred cCCCCCCCChhhhcCCCCCCEEeccCCCCCccChhhh
Q psy10289 197 AHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIF 233 (497)
Q Consensus 197 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~ 233 (497)
+.|.+... |..+..+.++-+|+..+|.+..++.+.|
T Consensus 108 ~~N~l~~~-p~vi~~L~~l~~Lds~~na~~eid~dl~ 143 (177)
T KOG4579|consen 108 RFNPLNAE-PRVIAPLIKLDMLDSPENARAEIDVDLF 143 (177)
T ss_pred ccCccccc-hHHHHHHHhHHHhcCCCCccccCcHHHh
Confidence 77777666 4444456677777777777766665533
No 55
>KOG1859|consensus
Probab=98.14 E-value=3.3e-08 Score=98.31 Aligned_cols=127 Identities=26% Similarity=0.363 Sum_probs=76.4
Q ss_pred CCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEecc
Q psy10289 118 HLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197 (497)
Q Consensus 118 ~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~ 197 (497)
+|...++++|.+...+ .++.-++.|+.|+|++|+++.+ +.+..+++|++|||++|.+..+|.-....+. |..|.++
T Consensus 165 ~L~~a~fsyN~L~~mD-~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMD-ESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHHhHH-HHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 4455555555554442 3344456677777777777766 3566677777777777777766653333333 7777777
Q ss_pred CCCCCCCChhhhcCCCCCCEEeccCCCCCccCh-hhhcCCccccEEEcCCCCCc
Q psy10289 198 HNRISKLAPRLFLKLSKLKSLDLSYNDIVEINP-EIFKDIQELKTFKCRSCGLE 250 (497)
Q Consensus 198 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~~~~L~~L~l~~~~l~ 250 (497)
+|-++.+ ..+.++.+|+.||+++|-+.+... ..+..+..|+.|.+.+|.+-
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 7776665 335666777777777775544211 22444556666777776553
No 56
>KOG2120|consensus
Probab=98.13 E-value=1.1e-07 Score=84.89 Aligned_cols=176 Identities=21% Similarity=0.183 Sum_probs=108.9
Q ss_pred cccEEEcCCCCCccc-CcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCCc-CCCcC-ccccCCCCCccEE
Q psy10289 238 ELKTFKCRSCGLENI-NPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNH-FPVIL-EKSFSSQFKLQVL 314 (497)
Q Consensus 238 ~L~~L~l~~~~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-~~~~~-~~~~~~~~~L~~L 314 (497)
.|+.++++...++.- ....+..+.+|+.|.+.++++.+.....++.-.+|+.++++.+. ++... ...+..|+.|.+|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 356666666555521 11234456677777777777776666677777778888877653 33221 1235567778888
Q ss_pred EccCCcccccccc-cc-cCCCCCCEEECcCCC--CCccCccccc-ccccCCCEEEcCCCc-CCCcchhhHhhcCCCCCEE
Q psy10289 315 CLKRNRLAKVTTT-AF-TNLTNLIELDISYNK--LDRLEVASFD-PIENSLRDLKISGNN-IQLSDVKNVLDKLVKLKAL 388 (497)
Q Consensus 315 ~l~~n~l~~~~~~-~~-~~~~~L~~L~l~~n~--l~~~~~~~~~-~~~~~L~~L~ls~n~-i~~~~~~~~~~~~~~L~~L 388 (497)
+++.+.+...... .. .--++|+.|+++|+. +..-....+. .++. |..|||+.|. ++ .+....+-+++.|++|
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~-l~~LDLSD~v~l~-~~~~~~~~kf~~L~~l 343 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPN-LVHLDLSDSVMLK-NDCFQEFFKFNYLQHL 343 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCc-eeeeccccccccC-chHHHHHHhcchheee
Confidence 8877765421111 01 112577888888873 2222223333 3444 8889998876 44 3566777788899999
Q ss_pred ecCCCcCCcCCccc---ccCCCcCcEEeCcCC
Q psy10289 389 SIADMNYTDIPKGL---FKMNPHLQFLNLSGN 417 (497)
Q Consensus 389 ~l~~n~i~~l~~~~---~~~~~~L~~L~Ls~n 417 (497)
.++.|. .|++.. |...|+|.+|++-++
T Consensus 344 SlsRCY--~i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 344 SLSRCY--DIIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred ehhhhc--CCChHHeeeeccCcceEEEEeccc
Confidence 999886 444433 456689999999886
No 57
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.08 E-value=3.9e-06 Score=53.60 Aligned_cols=40 Identities=35% Similarity=0.558 Sum_probs=27.8
Q ss_pred CCCCEEecCCCcCCcCCcccccCCCcCcEEeCcCCCCcccc
Q psy10289 383 VKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIH 423 (497)
Q Consensus 383 ~~L~~L~l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~l~~~~ 423 (497)
++|++|++++|+|+++|+. +..+++|+.|++++|++++++
T Consensus 1 ~~L~~L~l~~N~i~~l~~~-l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 1 KNLEELDLSNNQITDLPPE-LSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp TT-SEEEETSSS-SSHGGH-GTTCTTSSEEEETSSCCSBEG
T ss_pred CcceEEEccCCCCcccCch-HhCCCCCCEEEecCCCCCCCc
Confidence 3677777777777777764 467788888888888777654
No 58
>KOG1644|consensus
Probab=98.06 E-value=9.5e-06 Score=68.82 Aligned_cols=104 Identities=25% Similarity=0.319 Sum_probs=63.8
Q ss_pred CCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhcCCCCCCEEeccCCCCCccCh-hhhcCCccccEEE
Q psy10289 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINP-EIFKDIQELKTFK 243 (497)
Q Consensus 165 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~~~~L~~L~ 243 (497)
.+...+||++|.+..++. |..++.|.+|.+++|+|+.+.|.--..+++|..|.+.+|.+..+.. .-+..+++|++|.
T Consensus 42 d~~d~iDLtdNdl~~l~~--lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRKLDN--LPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLT 119 (233)
T ss_pred cccceecccccchhhccc--CCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceee
Confidence 356677788887776654 6677778888888888877766544445677777777776554322 2245566666666
Q ss_pred cCCCCCcccCc---ccccCCCCccEEEccC
Q psy10289 244 CRSCGLENINP---MMYSILADLIYLDLGY 270 (497)
Q Consensus 244 l~~~~l~~~~~---~~~~~l~~L~~L~l~~ 270 (497)
+-+|.++.-.. ..+..+++|+.||.++
T Consensus 120 ll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 120 LLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred ecCCchhcccCceeEEEEecCcceEeehhh
Confidence 66666553322 2333445555555443
No 59
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.88 E-value=7.4e-05 Score=71.94 Aligned_cols=159 Identities=16% Similarity=0.193 Sum_probs=87.3
Q ss_pred hcCCccccEEEcCCCCCcccCcccccCCCCccEEEccCCCCCccChhhhcCCccCceeeccCC-cCCCcCccccCCCCCc
Q psy10289 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGN-HFPVILEKSFSSQFKL 311 (497)
Q Consensus 233 ~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~~~~~~~~~~~~~~~L 311 (497)
+..+.+++.|++++|.++.++. -..+|++|.++++.--...|+.+ .++|+.|.+++| .+.. . +.+|
T Consensus 48 ~~~~~~l~~L~Is~c~L~sLP~----LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~s-L------P~sL 114 (426)
T PRK15386 48 IEEARASGRLYIKDCDIESLPV----LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISG-L------PESV 114 (426)
T ss_pred HHHhcCCCEEEeCCCCCcccCC----CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCcccccc-c------cccc
Confidence 3446788899999998888762 23578888888753323334433 257888888877 3432 2 2357
Q ss_pred cEEEccCCcccccccccccCCCCCCEEECcCCC-CCccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEec
Q psy10289 312 QVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK-LDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSI 390 (497)
Q Consensus 312 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l 390 (497)
+.|+++++....+.. -.++|+.|.+.+++ ....... ..+|.+|++|++++|... .+|..+. .+|+.|++
T Consensus 115 e~L~L~~n~~~~L~~----LPssLk~L~I~~~n~~~~~~lp--~~LPsSLk~L~Is~c~~i--~LP~~LP--~SLk~L~l 184 (426)
T PRK15386 115 RSLEIKGSATDSIKN----VPNGLTSLSINSYNPENQARID--NLISPSLKTLSLTGCSNI--ILPEKLP--ESLQSITL 184 (426)
T ss_pred ceEEeCCCCCccccc----CcchHhheeccccccccccccc--cccCCcccEEEecCCCcc--cCccccc--ccCcEEEe
Confidence 777776655433211 12456677765432 1111000 134556888888877643 1222222 47777777
Q ss_pred CCCcCC--cCCcccccCCCcCcEEeCcCC
Q psy10289 391 ADMNYT--DIPKGLFKMNPHLQFLNLSGN 417 (497)
Q Consensus 391 ~~n~i~--~l~~~~~~~~~~L~~L~Ls~n 417 (497)
+.+... .++...+. +++ .|++.++
T Consensus 185 s~n~~~sLeI~~~sLP--~nl-~L~f~n~ 210 (426)
T PRK15386 185 HIEQKTTWNISFEGFP--DGL-DIDLQNS 210 (426)
T ss_pred cccccccccCcccccc--ccc-Eechhhh
Confidence 765322 23332222 344 5665554
No 60
>KOG4341|consensus
Probab=97.87 E-value=1.3e-06 Score=81.78 Aligned_cols=112 Identities=18% Similarity=0.147 Sum_probs=52.2
Q ss_pred cCCccCceeeccCCc-CCCcCcccc-CCCCCccEEEccCCccccc--ccccccCCCCCCEEECcCCCCC-ccCccccc--
Q psy10289 282 EDLKKLETLLLDGNH-FPVILEKSF-SSQFKLQVLCLKRNRLAKV--TTTAFTNLTNLIELDISYNKLD-RLEVASFD-- 354 (497)
Q Consensus 282 ~~l~~L~~L~l~~n~-~~~~~~~~~-~~~~~L~~L~l~~n~l~~~--~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~-- 354 (497)
.++.+|+.+.+.+++ ++......+ .+++.|+.+++..+..... ....-.+|+.|+.+.+++|.+. +.....+.
T Consensus 317 ~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~ 396 (483)
T KOG4341|consen 317 QHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSS 396 (483)
T ss_pred cCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhc
Confidence 345566666666554 222211112 2345566666655432211 1122335666666666665422 22111111
Q ss_pred --ccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCc
Q psy10289 355 --PIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMN 394 (497)
Q Consensus 355 --~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~ 394 (497)
... .++.+.+++++...+...+.+..+++|+++++.+++
T Consensus 397 ~c~~~-~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 397 SCSLE-GLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred ccccc-ccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 112 255666666665444444555566666666666653
No 61
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.85 E-value=8.4e-05 Score=71.57 Aligned_cols=89 Identities=16% Similarity=0.127 Sum_probs=40.9
Q ss_pred CCCccEEEccCCCCCccChhhhcCCccCceeeccCCcCCCcCccccCCCCCccEEEccCC-cccccccccccCCCCCCEE
Q psy10289 260 LADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRN-RLAKVTTTAFTNLTNLIEL 338 (497)
Q Consensus 260 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~~~~~~~L~~L 338 (497)
+.+++.|++++|.+..++ . -.++|++|.+++|.-....|..+ +++|++|++++| .+..++ .+|+.|
T Consensus 51 ~~~l~~L~Is~c~L~sLP--~--LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP-------~sLe~L 117 (426)
T PRK15386 51 ARASGRLYIKDCDIESLP--V--LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLP-------ESVRSL 117 (426)
T ss_pred hcCCCEEEeCCCCCcccC--C--CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCcccccccc-------cccceE
Confidence 455666666666555432 1 12246666665543222233222 235666666655 332221 345555
Q ss_pred ECcCCCCCccCcccccccccCCCEEEcC
Q psy10289 339 DISYNKLDRLEVASFDPIENSLRDLKIS 366 (497)
Q Consensus 339 ~l~~n~l~~~~~~~~~~~~~~L~~L~ls 366 (497)
+++++.... +..+|.+|+.|.+.
T Consensus 118 ~L~~n~~~~-----L~~LPssLk~L~I~ 140 (426)
T PRK15386 118 EIKGSATDS-----IKNVPNGLTSLSIN 140 (426)
T ss_pred EeCCCCCcc-----cccCcchHhheecc
Confidence 555443322 22344445555553
No 62
>KOG4341|consensus
Probab=97.76 E-value=3.2e-06 Score=79.32 Aligned_cols=136 Identities=17% Similarity=0.111 Sum_probs=86.4
Q ss_pred CCCCccEEEccCCcc-ccc-ccccccCCCCCCEEECcCCC-CCccCcccccccccCCCEEEcCCCcC-CCcchhhHhhcC
Q psy10289 307 SQFKLQVLCLKRNRL-AKV-TTTAFTNLTNLIELDISYNK-LDRLEVASFDPIENSLRDLKISGNNI-QLSDVKNVLDKL 382 (497)
Q Consensus 307 ~~~~L~~L~l~~n~l-~~~-~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~~~L~~L~ls~n~i-~~~~~~~~~~~~ 382 (497)
.+..|+.++.+++.- +.. ....-.++.+|+.+-+++|+ +++.....+......|+.+++.++.. ++..+...-.++
T Consensus 292 ~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C 371 (483)
T KOG4341|consen 292 GCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNC 371 (483)
T ss_pred hhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCC
Confidence 455677777766532 111 11223567888888888884 55555555554444588888888873 333355566778
Q ss_pred CCCCEEecCCCc-CCcCCcccc----cCCCcCcEEeCcCCCCc-ccchhhhccCCCCCEEECCCCc
Q psy10289 383 VKLKALSIADMN-YTDIPKGLF----KMNPHLQFLNLSGNNLQ-DIHNLLYQSNIKLTHLDLSRNK 442 (497)
Q Consensus 383 ~~L~~L~l~~n~-i~~l~~~~~----~~~~~L~~L~Ls~n~l~-~~~~~~~~~~~~L~~L~l~~n~ 442 (497)
+.|+.+.+++|. |++...-.+ .....|+.+.+++++.. +.....+..|+.|+.+++-+++
T Consensus 372 ~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 372 PRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred chhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 888988888884 343311111 34567888999988654 3334556778899998888863
No 63
>KOG3665|consensus
Probab=97.41 E-value=5.8e-05 Score=78.80 Aligned_cols=132 Identities=17% Similarity=0.139 Sum_probs=69.4
Q ss_pred cCCcEEeccCCCC-CCCChhhh-cCCCCCCEEeccCCCCCcc-ChhhhcCCccccEEEcCCCCCcccCcccccCCCCccE
Q psy10289 189 SDLRVLSLAHNRI-SKLAPRLF-LKLSKLKSLDLSYNDIVEI-NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265 (497)
Q Consensus 189 ~~L~~L~l~~n~i-~~~~~~~~-~~l~~L~~L~l~~n~i~~~-~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~ 265 (497)
.+|+.|+++|... ..-++..+ ..+|.|++|.+.+-.+..- ......+.++|..||+++++++.+ ..++.+++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 4677777777542 22223333 3457777777776543321 123345566677777777666655 33455666666
Q ss_pred EEccCCCCCc-cChhhhcCCccCceeeccCCcCCCcC------ccccCCCCCccEEEccCCccc
Q psy10289 266 LDLGYNQLKY-LLADELEDLKKLETLLLDGNHFPVIL------EKSFSSQFKLQVLCLKRNRLA 322 (497)
Q Consensus 266 L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~~~~~~------~~~~~~~~~L~~L~l~~n~l~ 322 (497)
|.+.+-.+.. ..-..+.++++|+.||++........ -+.-..+|+|+.||.|++.+.
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDIN 263 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchh
Confidence 6666554442 12234556666666666654332211 011123555555655555443
No 64
>KOG2739|consensus
Probab=97.33 E-value=0.00015 Score=64.33 Aligned_cols=61 Identities=31% Similarity=0.374 Sum_probs=26.3
Q ss_pred CCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCC--cCccCCccccCCCCCCcEEeccCCCCc
Q psy10289 116 FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN--NITSLLDYNFKGMMNLQELYLDFNKIE 178 (497)
Q Consensus 116 ~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n--~l~~~~~~~~~~l~~L~~L~L~~n~~~ 178 (497)
+..|+.+.+.+..++.+. .|..+++|+.|.++.| ++..-.......+|+|+++++++|.++
T Consensus 42 ~~~le~ls~~n~gltt~~--~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 42 FVELELLSVINVGLTTLT--NFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred ccchhhhhhhccceeecc--cCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 344444444444444432 3344555555555555 332222222233345555555555443
No 65
>KOG3665|consensus
Probab=97.30 E-value=0.00014 Score=75.99 Aligned_cols=132 Identities=26% Similarity=0.256 Sum_probs=92.3
Q ss_pred CCccEEEccCCcccc--cccccccCCCCCCEEECcCCCCCccC-cccccccccCCCEEEcCCCcCCCcchhhHhhcCCCC
Q psy10289 309 FKLQVLCLKRNRLAK--VTTTAFTNLTNLIELDISYNKLDRLE-VASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKL 385 (497)
Q Consensus 309 ~~L~~L~l~~n~l~~--~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L 385 (497)
.+|++|++++..... -+...-..+|+|+.|.+.+-.+.... .......|+ |..||+|+.+++.. ..++++++|
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpN-L~sLDIS~TnI~nl---~GIS~LknL 197 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPN-LRSLDISGTNISNL---SGISRLKNL 197 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCc-cceeecCCCCccCc---HHHhccccH
Confidence 479999998865321 12233346899999999987765443 223344555 99999999998732 678899999
Q ss_pred CEEecCCCcCCcCC--cccccCCCcCcEEeCcCCCCcccc---h---hhhccCCCCCEEECCCCcccc
Q psy10289 386 KALSIADMNYTDIP--KGLFKMNPHLQFLNLSGNNLQDIH---N---LLYQSNIKLTHLDLSRNKFKG 445 (497)
Q Consensus 386 ~~L~l~~n~i~~l~--~~~~~~~~~L~~L~Ls~n~l~~~~---~---~~~~~~~~L~~L~l~~n~l~~ 445 (497)
+.|.+.+-.+..-. ..+| ++++|++||+|..+..... . +.-..+|.|+.||.|++.+..
T Consensus 198 q~L~mrnLe~e~~~~l~~LF-~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 198 QVLSMRNLEFESYQDLIDLF-NLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINE 264 (699)
T ss_pred HHHhccCCCCCchhhHHHHh-cccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhH
Confidence 99999888765321 2334 5799999999987655433 1 223358999999999876664
No 66
>KOG2123|consensus
Probab=96.99 E-value=4.3e-05 Score=68.10 Aligned_cols=101 Identities=31% Similarity=0.377 Sum_probs=68.1
Q ss_pred CCCCCcEEEccCCCCCccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCc-ccccCCcCCcE
Q psy10289 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPS-SVFMHLSDLRV 193 (497)
Q Consensus 115 ~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~-~~~~~l~~L~~ 193 (497)
.+.+.+.|++-++.+++|. .+.+|+.|++|.|+-|+|+++. .+..|.+|++|+|..|.|.++.. ..+.++++|+.
T Consensus 17 dl~~vkKLNcwg~~L~DIs--ic~kMp~lEVLsLSvNkIssL~--pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 17 DLENVKKLNCWGCGLDDIS--ICEKMPLLEVLSLSVNKISSLA--PLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHHhhhhcccCCCccHHH--HHHhcccceeEEeeccccccch--hHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 3556777888888887774 4567788888888888887773 36777888888888887776543 23567777888
Q ss_pred EeccCCCCCCCCh-----hhhcCCCCCCEEe
Q psy10289 194 LSLAHNRISKLAP-----RLFLKLSKLKSLD 219 (497)
Q Consensus 194 L~l~~n~i~~~~~-----~~~~~l~~L~~L~ 219 (497)
|.|..|.-.+..+ ..+..+++|+.||
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 8887776544332 2334456666554
No 67
>KOG2739|consensus
Probab=96.96 E-value=0.00039 Score=61.78 Aligned_cols=106 Identities=26% Similarity=0.286 Sum_probs=47.6
Q ss_pred ccCceeeccCCcCCCcCccccCCCCCccEEEccCC--cccccccccccCCCCCCEEECcCCCCCccC-cccccccccCCC
Q psy10289 285 KKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRN--RLAKVTTTAFTNLTNLIELDISYNKLDRLE-VASFDPIENSLR 361 (497)
Q Consensus 285 ~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n--~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~~L~ 361 (497)
..|+.+.+.+..++.. ..|..+++|++|.++.| ++..-.......+++|+++++++|++..+. ...+..+.+ |.
T Consensus 43 ~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~n-L~ 119 (260)
T KOG2739|consen 43 VELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELEN-LK 119 (260)
T ss_pred cchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcc-hh
Confidence 3444444444444433 23445566666666666 333222222334466666666666655321 111222333 55
Q ss_pred EEEcCCCcCCCc-c-hhhHhhcCCCCCEEecCCC
Q psy10289 362 DLKISGNNIQLS-D-VKNVLDKLVKLKALSIADM 393 (497)
Q Consensus 362 ~L~ls~n~i~~~-~-~~~~~~~~~~L~~L~l~~n 393 (497)
.|++.+|..+.. + -...|.-+++|+.|+-.+.
T Consensus 120 ~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~dv 153 (260)
T KOG2739|consen 120 SLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCDV 153 (260)
T ss_pred hhhcccCCccccccHHHHHHHHhhhhcccccccc
Confidence 566655553311 1 0133344455555544433
No 68
>KOG2123|consensus
Probab=96.82 E-value=0.00011 Score=65.50 Aligned_cols=100 Identities=23% Similarity=0.208 Sum_probs=57.9
Q ss_pred CCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCCcCCc-ccccCCCcCc
Q psy10289 332 LTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTDIPK-GLFKMNPHLQ 410 (497)
Q Consensus 332 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~l~~-~~~~~~~~L~ 410 (497)
+.+.+.|++-+|.+.++. ....++. |+.|.|+-|.|+. ...+..|++|++|+|..|.|.++.. ..+.++|+|+
T Consensus 18 l~~vkKLNcwg~~L~DIs--ic~kMp~-lEVLsLSvNkIss---L~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr 91 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDIS--ICEKMPL-LEVLSLSVNKISS---LAPLQRCTRLKELYLRKNCIESLDELEYLKNLPSLR 91 (388)
T ss_pred HHHhhhhcccCCCccHHH--HHHhccc-ceeEEeecccccc---chhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhh
Confidence 445566777777666553 2234444 7777777776652 2345666777777777776665543 2235667777
Q ss_pred EEeCcCCCCcccch-----hhhccCCCCCEEE
Q psy10289 411 FLNLSGNNLQDIHN-----LLYQSNIKLTHLD 437 (497)
Q Consensus 411 ~L~Ls~n~l~~~~~-----~~~~~~~~L~~L~ 437 (497)
.|.|..|.-.+-.+ ..+.-+|+|+.||
T Consensus 92 ~LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 92 TLWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hHhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 77777665554333 2233455565554
No 69
>KOG1947|consensus
Probab=96.63 E-value=0.00083 Score=68.50 Aligned_cols=110 Identities=23% Similarity=0.116 Sum_probs=50.5
Q ss_pred CCccccEEEcCCCCCccc--CcccccCCCCccEEEccCC-CCCccC----hhhhcCCccCceeeccCCc-CCCcCccccC
Q psy10289 235 DIQELKTFKCRSCGLENI--NPMMYSILADLIYLDLGYN-QLKYLL----ADELEDLKKLETLLLDGNH-FPVILEKSFS 306 (497)
Q Consensus 235 ~~~~L~~L~l~~~~l~~~--~~~~~~~l~~L~~L~l~~n-~l~~~~----~~~~~~l~~L~~L~l~~n~-~~~~~~~~~~ 306 (497)
..+.|+.+.+..+.-..- .......++.|++|+++++ ...... ......+++|+.++++.+. +++..-..+.
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~ 265 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALA 265 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHH
Confidence 356666666665522211 1123344666777776652 111100 1123344566666666655 4433222222
Q ss_pred -CCCCccEEEccCCc-ccccc-cccccCCCCCCEEECcCCC
Q psy10289 307 -SQFKLQVLCLKRNR-LAKVT-TTAFTNLTNLIELDISYNK 344 (497)
Q Consensus 307 -~~~~L~~L~l~~n~-l~~~~-~~~~~~~~~L~~L~l~~n~ 344 (497)
.+++|++|.+.++. ++... ......+++|++|++++|.
T Consensus 266 ~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~ 306 (482)
T KOG1947|consen 266 SRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCH 306 (482)
T ss_pred hhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCc
Confidence 25566666655444 22211 1123345566666666553
No 70
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.59 E-value=0.00072 Score=35.83 Aligned_cols=22 Identities=36% Similarity=0.603 Sum_probs=18.6
Q ss_pred ccceecCCCCcccccCchhhhhh
Q psy10289 10 KLKSLDLSYNDIVEINPEIFKDI 32 (497)
Q Consensus 10 ~L~~Ldls~n~i~~i~~~~f~~l 32 (497)
+|++||+|+|+|+.|+++ |++|
T Consensus 1 ~L~~Ldls~n~l~~ip~~-~~~l 22 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSS-FSNL 22 (22)
T ss_dssp TESEEEETSSEESEEGTT-TTT-
T ss_pred CccEEECCCCcCEeCChh-hcCC
Confidence 589999999999999877 8764
No 71
>KOG1947|consensus
Probab=96.50 E-value=0.00071 Score=69.04 Aligned_cols=126 Identities=23% Similarity=0.185 Sum_probs=54.6
Q ss_pred CCCCCCEEeccCCC-CCccChhhhcC-CccccEEEcCCCC-CcccC-cccccCCCCccEEEccCCCCC--ccChhhhcCC
Q psy10289 211 KLSKLKSLDLSYND-IVEINPEIFKD-IQELKTFKCRSCG-LENIN-PMMYSILADLIYLDLGYNQLK--YLLADELEDL 284 (497)
Q Consensus 211 ~l~~L~~L~l~~n~-i~~~~~~~~~~-~~~L~~L~l~~~~-l~~~~-~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l 284 (497)
.+.+|+.++++.+. +++..-..+.. +++|+.|.+.+|. ++... ......++.|++|+++++... ........++
T Consensus 241 ~~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c 320 (482)
T KOG1947|consen 241 ICRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNC 320 (482)
T ss_pred hcCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhC
Confidence 34556666666555 44433333322 4556666555444 33111 112233455666666655432 1111223335
Q ss_pred ccCceeeccCCcCCCcCccccCCCCCccEEEccCCcc---cccccccccCCCCCCEEECcCCCCC
Q psy10289 285 KKLETLLLDGNHFPVILEKSFSSQFKLQVLCLKRNRL---AKVTTTAFTNLTNLIELDISYNKLD 346 (497)
Q Consensus 285 ~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l---~~~~~~~~~~~~~L~~L~l~~n~l~ 346 (497)
++++.+.+..... +..++.+.+.+... .......+..+++++.+.+.++...
T Consensus 321 ~~l~~l~~~~~~~----------c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~ 375 (482)
T KOG1947|consen 321 PNLRELKLLSLNG----------CPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGIS 375 (482)
T ss_pred cchhhhhhhhcCC----------CccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhcc
Confidence 5555544332211 23333333333211 0122223456677777777766533
No 72
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=95.91 E-value=0.0043 Score=34.42 Aligned_cols=23 Identities=35% Similarity=0.689 Sum_probs=21.3
Q ss_pred ccccceecCCCCcccccCchhhh
Q psy10289 8 MSKLKSLDLSYNDIVEINPEIFK 30 (497)
Q Consensus 8 ~~~L~~Ldls~n~i~~i~~~~f~ 30 (497)
+++|++|+|++|+|+.+++++|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 57899999999999999999986
No 73
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=95.91 E-value=0.0043 Score=34.42 Aligned_cols=23 Identities=35% Similarity=0.689 Sum_probs=21.3
Q ss_pred ccccceecCCCCcccccCchhhh
Q psy10289 8 MSKLKSLDLSYNDIVEINPEIFK 30 (497)
Q Consensus 8 ~~~L~~Ldls~n~i~~i~~~~f~ 30 (497)
+++|++|+|++|+|+.+++++|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 57899999999999999999986
No 74
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.69 E-value=0.0061 Score=29.87 Aligned_cols=17 Identities=35% Similarity=0.534 Sum_probs=8.4
Q ss_pred CCCCEEECCCCcccccc
Q psy10289 431 IKLTHLDLSRNKFKGFD 447 (497)
Q Consensus 431 ~~L~~L~l~~n~l~~~~ 447 (497)
++|+.|++++|+++.+|
T Consensus 1 ~~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 1 PNLRTLDLSNNRLTSLP 17 (17)
T ss_dssp TT-SEEEETSS--SSE-
T ss_pred CccCEEECCCCCCCCCc
Confidence 35666777777666654
No 75
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.41 E-value=0.0065 Score=32.11 Aligned_cols=17 Identities=35% Similarity=0.554 Sum_probs=8.3
Q ss_pred CCEEecCCCcCCcCCcc
Q psy10289 385 LKALSIADMNYTDIPKG 401 (497)
Q Consensus 385 L~~L~l~~n~i~~l~~~ 401 (497)
|+.|++++|+++.||..
T Consensus 2 L~~Ldls~n~l~~ip~~ 18 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSS 18 (22)
T ss_dssp ESEEEETSSEESEEGTT
T ss_pred ccEEECCCCcCEeCChh
Confidence 44455555554444444
No 76
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=94.63 E-value=0.027 Score=31.10 Aligned_cols=22 Identities=23% Similarity=0.614 Sum_probs=12.0
Q ss_pred CCCCEEecCCCcCCcCCccccc
Q psy10289 383 VKLKALSIADMNYTDIPKGLFK 404 (497)
Q Consensus 383 ~~L~~L~l~~n~i~~l~~~~~~ 404 (497)
++|+.|++++|+|+.+|.++|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 3455555555555555555543
No 77
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=94.63 E-value=0.027 Score=31.10 Aligned_cols=22 Identities=23% Similarity=0.614 Sum_probs=12.0
Q ss_pred CCCCEEecCCCcCCcCCccccc
Q psy10289 383 VKLKALSIADMNYTDIPKGLFK 404 (497)
Q Consensus 383 ~~L~~L~l~~n~i~~l~~~~~~ 404 (497)
++|+.|++++|+|+.+|.++|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 3455555555555555555543
No 78
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=94.45 E-value=0.026 Score=27.60 Aligned_cols=14 Identities=21% Similarity=0.520 Sum_probs=4.7
Q ss_pred CCEEecCCCcCCcC
Q psy10289 385 LKALSIADMNYTDI 398 (497)
Q Consensus 385 L~~L~l~~n~i~~l 398 (497)
|+.|++++|+++++
T Consensus 3 L~~L~l~~n~L~~l 16 (17)
T PF13504_consen 3 LRTLDLSNNRLTSL 16 (17)
T ss_dssp -SEEEETSS--SSE
T ss_pred cCEEECCCCCCCCC
Confidence 44444444444433
No 79
>KOG3864|consensus
Probab=94.06 E-value=0.012 Score=50.40 Aligned_cols=84 Identities=21% Similarity=0.289 Sum_probs=55.3
Q ss_pred CccEEEccCCcccccccccccCCCCCCEEECcCCC-CCccCcccccccccCCCEEEcCCCc-CCCcchhhHhhcCCCCCE
Q psy10289 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK-LDRLEVASFDPIENSLRDLKISGNN-IQLSDVKNVLDKLVKLKA 387 (497)
Q Consensus 310 ~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~~~L~~L~ls~n~-i~~~~~~~~~~~~~~L~~ 387 (497)
.++.++-++..|..+.-+-+.+++.++.|.+..|. +.+...+-+....++|+.|++++|+ |+... ...+..+++|+.
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~G-L~~L~~lknLr~ 180 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGG-LACLLKLKNLRR 180 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhH-HHHHHHhhhhHH
Confidence 46777777777766665667777777777777763 3333333344444568888888887 66444 345677788888
Q ss_pred EecCCCc
Q psy10289 388 LSIADMN 394 (497)
Q Consensus 388 L~l~~n~ 394 (497)
|.+.+-.
T Consensus 181 L~l~~l~ 187 (221)
T KOG3864|consen 181 LHLYDLP 187 (221)
T ss_pred HHhcCch
Confidence 8777653
No 80
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=93.90 E-value=0.019 Score=31.04 Aligned_cols=23 Identities=30% Similarity=0.430 Sum_probs=15.9
Q ss_pred ccccceecCCCCcccccCchhhh
Q psy10289 8 MSKLKSLDLSYNDIVEINPEIFK 30 (497)
Q Consensus 8 ~~~L~~Ldls~n~i~~i~~~~f~ 30 (497)
+++|++|||++|.|+.....+++
T Consensus 1 ~~~L~~L~l~~n~i~~~g~~~l~ 23 (24)
T PF13516_consen 1 NPNLETLDLSNNQITDEGASALA 23 (24)
T ss_dssp -TT-SEEE-TSSBEHHHHHHHHH
T ss_pred CCCCCEEEccCCcCCHHHHHHhC
Confidence 58999999999999876655443
No 81
>KOG4308|consensus
Probab=93.08 E-value=0.0014 Score=65.55 Aligned_cols=83 Identities=24% Similarity=0.063 Sum_probs=39.3
Q ss_pred ccEEEcCCCCCcccCc----ccccCCCCccEEEccCCCCCccChhh----hcCC-ccCceeeccCCcCCCcCc----ccc
Q psy10289 239 LKTFKCRSCGLENINP----MMYSILADLIYLDLGYNQLKYLLADE----LEDL-KKLETLLLDGNHFPVILE----KSF 305 (497)
Q Consensus 239 L~~L~l~~~~l~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~~~----~~~l-~~L~~L~l~~n~~~~~~~----~~~ 305 (497)
+..+.+.+|.+..-.. ..+.....|+.|++++|.+....... +... ..++.|++..|.++.... ..+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 5566666666653322 23344566666666666665322211 1121 334445555555444321 122
Q ss_pred CCCCCccEEEccCCcc
Q psy10289 306 SSQFKLQVLCLKRNRL 321 (497)
Q Consensus 306 ~~~~~L~~L~l~~n~l 321 (497)
.....++.++++.|.+
T Consensus 169 ~~~~~l~~l~l~~n~l 184 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGL 184 (478)
T ss_pred hcccchhHHHHHhccc
Confidence 2344555555555544
No 82
>KOG3864|consensus
Probab=92.59 E-value=0.014 Score=50.13 Aligned_cols=34 Identities=32% Similarity=0.274 Sum_probs=17.8
Q ss_pred CcCcEEeCcCC-CCcccchhhhccCCCCCEEECCC
Q psy10289 407 PHLQFLNLSGN-NLQDIHNLLYQSNIKLTHLDLSR 440 (497)
Q Consensus 407 ~~L~~L~Ls~n-~l~~~~~~~~~~~~~L~~L~l~~ 440 (497)
++|+.|++++| +|++-.-..+..+++|+.|.+.+
T Consensus 151 ~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 151 PSLQDLDLSGCPRITDGGLACLLKLKNLRRLHLYD 185 (221)
T ss_pred cchheeeccCCCeechhHHHHHHHhhhhHHHHhcC
Confidence 45555555554 35554444455555555555544
No 83
>KOG4308|consensus
Probab=91.97 E-value=0.0018 Score=64.84 Aligned_cols=134 Identities=26% Similarity=0.283 Sum_probs=77.9
Q ss_pred CCCccEEEccCCCCCc----cChhh----hcCCccCceeeccCCcCCCcC----ccccCCCCC-ccEEEccCCcccccc-
Q psy10289 260 LADLIYLDLGYNQLKY----LLADE----LEDLKKLETLLLDGNHFPVIL----EKSFSSQFK-LQVLCLKRNRLAKVT- 325 (497)
Q Consensus 260 l~~L~~L~l~~n~l~~----~~~~~----~~~l~~L~~L~l~~n~~~~~~----~~~~~~~~~-L~~L~l~~n~l~~~~- 325 (497)
...+++++++.|.+.. ..+.+ +....++++|.+..|.++... ...+...+. +.++++..|.+....
T Consensus 171 ~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~ 250 (478)
T KOG4308|consen 171 NEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVGV 250 (478)
T ss_pred ccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHHH
Confidence 4556666666665531 11122 334667888888887765321 122333444 667888888876442
Q ss_pred ---cccccCC-CCCCEEECcCCCCCccCcccc----cccccCCCEEEcCCCcCCCcchhhH---hhcCCCCCEEecCCCc
Q psy10289 326 ---TTAFTNL-TNLIELDISYNKLDRLEVASF----DPIENSLRDLKISGNNIQLSDVKNV---LDKLVKLKALSIADMN 394 (497)
Q Consensus 326 ---~~~~~~~-~~L~~L~l~~n~l~~~~~~~~----~~~~~~L~~L~ls~n~i~~~~~~~~---~~~~~~L~~L~l~~n~ 394 (497)
...+..+ ..+++++++.|.++......+ ..++ .++.+.+++|++........ ......+..+-+.++.
T Consensus 251 ~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~-~l~~l~l~~n~l~~~~~~~~~~~l~~~~~~~~~~l~~~~ 329 (478)
T KOG4308|consen 251 EKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCR-QLEELSLSNNPLTDYGVELLLEALERKTPLLHLVLGGTG 329 (478)
T ss_pred HHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhH-HHHHhhcccCccccHHHHHHHHHhhhcccchhhhccccC
Confidence 2334555 677889999998886554433 3344 38888888888774332222 2333445556666554
No 84
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=91.95 E-value=0.094 Score=28.88 Aligned_cols=19 Identities=42% Similarity=0.623 Sum_probs=16.5
Q ss_pred ccccceecCCCCcccccCc
Q psy10289 8 MSKLKSLDLSYNDIVEINP 26 (497)
Q Consensus 8 ~~~L~~Ldls~n~i~~i~~ 26 (497)
+++|++|++++|.|+.|+.
T Consensus 1 L~~L~~L~L~~NkI~~IEn 19 (26)
T smart00365 1 LTNLEELDLSQNKIKKIEN 19 (26)
T ss_pred CCccCEEECCCCccceecC
Confidence 4689999999999998864
No 85
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=89.59 E-value=0.25 Score=27.08 Aligned_cols=19 Identities=26% Similarity=0.406 Sum_probs=15.6
Q ss_pred CCCCEEECCCCccccccCC
Q psy10289 431 IKLTHLDLSRNKFKGFDEK 449 (497)
Q Consensus 431 ~~L~~L~l~~n~l~~~~~~ 449 (497)
++|+.|++++|+++.+|+-
T Consensus 2 ~~L~~L~vs~N~Lt~LPeL 20 (26)
T smart00364 2 PSLKELNVSNNQLTSLPEL 20 (26)
T ss_pred cccceeecCCCccccCccc
Confidence 5688889999999888873
No 86
>KOG0473|consensus
Probab=88.74 E-value=0.0081 Score=52.59 Aligned_cols=91 Identities=20% Similarity=0.184 Sum_probs=48.8
Q ss_pred ccCCCCCCCCCCCCEEeccCCcCccCCccccCCCCCCcEEeccCCCCccCCcccccCCcCCcEEeccCCCCCCCChhhhc
Q psy10289 131 AIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRLFL 210 (497)
Q Consensus 131 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~ 210 (497)
+++...+......+.||++.|++.... ..|+-+..|..++++.|.+..+|.+ |.....++.+++..|..+.. |.++.
T Consensus 32 ~~~v~ei~~~kr~tvld~~s~r~vn~~-~n~s~~t~~~rl~~sknq~~~~~~d-~~q~~e~~~~~~~~n~~~~~-p~s~~ 108 (326)
T KOG0473|consen 32 EIPVREIASFKRVTVLDLSSNRLVNLG-KNFSILTRLVRLDLSKNQIKFLPKD-AKQQRETVNAASHKNNHSQQ-PKSQK 108 (326)
T ss_pred ccchhhhhccceeeeehhhhhHHHhhc-cchHHHHHHHHHhccHhhHhhChhh-HHHHHHHHHHHhhccchhhC-Ccccc
Confidence 333334444455566666666555442 2344445555666666666555554 34555555556555555544 45555
Q ss_pred CCCCCCEEeccCCC
Q psy10289 211 KLSKLKSLDLSYND 224 (497)
Q Consensus 211 ~l~~L~~L~l~~n~ 224 (497)
..+.++++++..+.
T Consensus 109 k~~~~k~~e~k~~~ 122 (326)
T KOG0473|consen 109 KEPHPKKNEQKKTE 122 (326)
T ss_pred ccCCcchhhhccCc
Confidence 55666666665554
No 87
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=85.04 E-value=0.39 Score=26.98 Aligned_cols=19 Identities=32% Similarity=0.454 Sum_probs=15.5
Q ss_pred cccceecCCCCcccccCch
Q psy10289 9 SKLKSLDLSYNDIVEINPE 27 (497)
Q Consensus 9 ~~L~~Ldls~n~i~~i~~~ 27 (497)
++|++|||++|.|+.-+..
T Consensus 2 ~~L~~LdL~~N~i~~~G~~ 20 (28)
T smart00368 2 PSLRELDLSNNKLGDEGAR 20 (28)
T ss_pred CccCEEECCCCCCCHHHHH
Confidence 6899999999999865443
No 88
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=84.46 E-value=0.32 Score=57.65 Aligned_cols=39 Identities=23% Similarity=0.279 Sum_probs=31.2
Q ss_pred eCcCCCCcccchhhhccCCCCCEEECCCCccccccCCCc
Q psy10289 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451 (497)
Q Consensus 413 ~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 451 (497)
||++|+|+.+++..|..+++|++|+|++|++.+=....+
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CDC~L~W 39 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECDCGLAR 39 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccccccccHH
Confidence 578888888888888888888888888888887665544
No 89
>KOG0473|consensus
Probab=79.27 E-value=0.047 Score=47.99 Aligned_cols=93 Identities=19% Similarity=0.227 Sum_probs=49.3
Q ss_pred ccccccccCCCCCCEEECcCCCCCccCcccccccccCCCEEEcCCCcCCCcchhhHhhcCCCCCEEecCCCcCCcCCccc
Q psy10289 323 KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTDIPKGL 402 (497)
Q Consensus 323 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~l~~~~ 402 (497)
.++...+......+.||++.|++-.... .|.-+.. +..++++.|.+. -.|..+.....+..++..+|..+..|.+
T Consensus 32 ~~~v~ei~~~kr~tvld~~s~r~vn~~~-n~s~~t~-~~rl~~sknq~~--~~~~d~~q~~e~~~~~~~~n~~~~~p~s- 106 (326)
T KOG0473|consen 32 EIPVREIASFKRVTVLDLSSNRLVNLGK-NFSILTR-LVRLDLSKNQIK--FLPKDAKQQRETVNAASHKNNHSQQPKS- 106 (326)
T ss_pred ccchhhhhccceeeeehhhhhHHHhhcc-chHHHHH-HHHHhccHhhHh--hChhhHHHHHHHHHHHhhccchhhCCcc-
Confidence 3443444555666666666666544321 1222223 555666666554 2344455555555566666665565554
Q ss_pred ccCCCcCcEEeCcCCCCc
Q psy10289 403 FKMNPHLQFLNLSGNNLQ 420 (497)
Q Consensus 403 ~~~~~~L~~L~Ls~n~l~ 420 (497)
|...|.++.+++-+|.+.
T Consensus 107 ~~k~~~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 107 QKKEPHPKKNEQKKTEFF 124 (326)
T ss_pred ccccCCcchhhhccCcch
Confidence 355566666666666544
No 90
>KOG3763|consensus
Probab=65.97 E-value=3.1 Score=41.70 Aligned_cols=80 Identities=24% Similarity=0.293 Sum_probs=44.4
Q ss_pred CCCccEEEccCCccccccc--ccccCCCCCCEEECcCC--CCCccC-cccccccccCCCEEEcCCCcCCCc------chh
Q psy10289 308 QFKLQVLCLKRNRLAKVTT--TAFTNLTNLIELDISYN--KLDRLE-VASFDPIENSLRDLKISGNNIQLS------DVK 376 (497)
Q Consensus 308 ~~~L~~L~l~~n~l~~~~~--~~~~~~~~L~~L~l~~n--~l~~~~-~~~~~~~~~~L~~L~ls~n~i~~~------~~~ 376 (497)
.+.+..+++++|++..+.. ..-...|+|..|+|++| .+.... ...+..+ + |++|.+.||++... .+.
T Consensus 217 ~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l-~-Leel~l~GNPlc~tf~~~s~yv~ 294 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGL-P-LEELVLEGNPLCTTFSDRSEYVS 294 (585)
T ss_pred CcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCC-C-HHHeeecCCccccchhhhHHHHH
Confidence 4566677777777654432 11234578888888888 333221 1222233 3 88888999986521 111
Q ss_pred hHhhcCCCCCEEe
Q psy10289 377 NVLDKLVKLKALS 389 (497)
Q Consensus 377 ~~~~~~~~L~~L~ 389 (497)
..-..+|+|..||
T Consensus 295 ~i~~~FPKL~~LD 307 (585)
T KOG3763|consen 295 AIRELFPKLLRLD 307 (585)
T ss_pred HHHHhcchheeec
Confidence 2223566666655
No 91
>KOG3763|consensus
Probab=64.21 E-value=2 Score=43.07 Aligned_cols=62 Identities=21% Similarity=0.172 Sum_probs=38.2
Q ss_pred CCEEEcCCCcCCC-cchhhHhhcCCCCCEEecCCC--cCCcCCcccccCCCcCcEEeCcCCCCcc
Q psy10289 360 LRDLKISGNNIQL-SDVKNVLDKLVKLKALSIADM--NYTDIPKGLFKMNPHLQFLNLSGNNLQD 421 (497)
Q Consensus 360 L~~L~ls~n~i~~-~~~~~~~~~~~~L~~L~l~~n--~i~~l~~~~~~~~~~L~~L~Ls~n~l~~ 421 (497)
+..+.+++|.+.. ..+.......|+|+.|+|++| .+..-+.----+...|++|-+-||++..
T Consensus 220 i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 220 ILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLCT 284 (585)
T ss_pred eeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCcccc
Confidence 7778888888642 233444556688888888888 4332221111123567888888887764
No 92
>smart00013 LRRNT Leucine rich repeat N-terminal domain.
Probab=63.79 E-value=13 Score=21.72 Aligned_cols=24 Identities=21% Similarity=0.584 Sum_probs=19.9
Q ss_pred CCCCCceeccCCCCcEEEEecCCCCCCCC
Q psy10289 55 MCPYMCECALDDRGRYEIVCRRGDMANPI 83 (497)
Q Consensus 55 ~~p~~~~c~~~~~~~~~~~c~~~~~~~~~ 83 (497)
.||..|.|.. ..+.|...++..+|
T Consensus 1 ~CP~~C~C~~-----~~V~C~~~~L~~vP 24 (33)
T smart00013 1 ACPAPCNCSG-----TAVDCSGRGLTEVP 24 (33)
T ss_pred CcCCCCEECC-----CEeEeCCCCcCccC
Confidence 4899999982 37999999998777
No 93
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=63.40 E-value=3.3 Score=22.57 Aligned_cols=17 Identities=35% Similarity=0.399 Sum_probs=13.9
Q ss_pred ccccceecCCCCc-cccc
Q psy10289 8 MSKLKSLDLSYND-IVEI 24 (497)
Q Consensus 8 ~~~L~~Ldls~n~-i~~i 24 (497)
||+|+.|+++++. |+..
T Consensus 1 c~~L~~L~l~~C~~itD~ 18 (26)
T smart00367 1 CPNLRELDLSGCTNITDE 18 (26)
T ss_pred CCCCCEeCCCCCCCcCHH
Confidence 6899999999984 6654
No 94
>PF01462 LRRNT: Leucine rich repeat N-terminal domain; InterPro: IPR000372 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain and a C-terminal LRR domain (IPR000483 from INTERPRO). This entry represents the N-terminal LRR domain. ; PDB: 3E6J_A 1W8A_A 2V9S_C 2V9T_B 3TWI_D 3ZYN_A 3ZYO_A 1OOK_G 1QYY_G 1SQ0_B ....
Probab=61.67 E-value=9.3 Score=21.37 Aligned_cols=24 Identities=21% Similarity=0.528 Sum_probs=18.1
Q ss_pred CCCCCceeccCCCCcEEEEecCCCCCCCC
Q psy10289 55 MCPYMCECALDDRGRYEIVCRRGDMANPI 83 (497)
Q Consensus 55 ~~p~~~~c~~~~~~~~~~~c~~~~~~~~~ 83 (497)
.||..|.|... .++|+..++..+|
T Consensus 1 ~CP~~C~C~~~-----~V~C~~~~L~~vP 24 (28)
T PF01462_consen 1 ACPRPCTCSGL-----TVDCSGRGLTAVP 24 (28)
T ss_dssp SSETTSEEETT-----EEEETTSS-SSS-
T ss_pred CcCCCCEecCC-----EeECCCCCCCccC
Confidence 48999999933 7999999998776
No 95
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=42.25 E-value=16 Score=44.36 Aligned_cols=29 Identities=28% Similarity=0.386 Sum_probs=15.4
Q ss_pred cCCCcCCcCCcccccCCCcCcEEeCcCCC
Q psy10289 390 IADMNYTDIPKGLFKMNPHLQFLNLSGNN 418 (497)
Q Consensus 390 l~~n~i~~l~~~~~~~~~~L~~L~Ls~n~ 418 (497)
|++|+|+.|+.+.|..+++|+.|+|++|.
T Consensus 2 LSnN~LstLp~g~F~~L~sL~~LdLsgNP 30 (2740)
T TIGR00864 2 ISNNKISTIEEGICANLCNLSEIDLSGNP 30 (2740)
T ss_pred CCCCcCCccChHHhccCCCceEEEeeCCc
Confidence 44555555555555555555555555553
No 96
>KOG4242|consensus
Probab=30.79 E-value=4.3e+02 Score=26.75 Aligned_cols=14 Identities=36% Similarity=0.567 Sum_probs=6.3
Q ss_pred CcCcEEeCcCCCCc
Q psy10289 407 PHLQFLNLSGNNLQ 420 (497)
Q Consensus 407 ~~L~~L~Ls~n~l~ 420 (497)
+.+..|++++|...
T Consensus 440 qtl~kldisgn~mg 453 (553)
T KOG4242|consen 440 QTLAKLDISGNGMG 453 (553)
T ss_pred cccccccccCCCcc
Confidence 34444444444433
No 97
>TIGR02167 Liste_lipo_26 bacterial surface protein 26-residue repeat. This model describes a tandem peptide repeat sequence of 25 or 26 residues, found in predicted surface proteins (often lipoproteins) from Listeria monocytogenes, L. innocua, Enterococcus faecalis, Lactobacillus plantarum, Mycoplasma mycoides, Helicobacter hepaticus, and other species.
Probab=23.20 E-value=35 Score=18.71 Aligned_cols=14 Identities=43% Similarity=0.335 Sum_probs=10.8
Q ss_pred eeeccccceecCCC
Q psy10289 5 LIFMSKLKSLDLSY 18 (497)
Q Consensus 5 ~~~~~~L~~Ldls~ 18 (497)
|.+|++++.||++.
T Consensus 2 F~~~~~~~~ldls~ 15 (26)
T TIGR02167 2 FSGCSSLTSLDVSN 15 (26)
T ss_pred CCcccccccccccc
Confidence 56788888888874
Done!