Your job contains 1 sequence.
>psy10289
MEFTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMC
ECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLE
ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI
PSSVFMHLSDLRVLSLAHNRISKLAPRLFLKLSKLKSLDLSYNDIVEINPEIFKDIQELK
TFKCRSCGLENINPMMYSILADLIYLDLGYNQLKYLLADELEDLKKLETLLLDGNHFPVI
LEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSL
RDLKISGNNIQLSDVKNVLDKLVKLKALSIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQ
DIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAAKNSFALQSSMGKNAEYA
VFIASSSISYLLEALLT
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10289
(497 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0243486 - symbol:rdo "reduced ocelli" species:7227... 643 5.4e-63 1
WB|WBGene00011345 - symbol:dma-1 species:6239 "Caenorhabd... 248 3.3e-18 1
UNIPROTKB|F1NI07 - symbol:IGFALS "Uncharacterized protein... 248 3.3e-18 1
FB|FBgn0036494 - symbol:Toll-6 "Toll-6" species:7227 "Dro... 243 2.0e-16 2
UNIPROTKB|E1BX56 - symbol:LRRTM1 "Uncharacterized protein... 230 2.6e-16 1
UNIPROTKB|E2QW21 - symbol:LRRTM1 "Uncharacterized protein... 229 3.4e-16 1
RGD|70551 - symbol:Lrrc15 "leucine rich repeat containing... 228 5.5e-16 1
WB|WBGene00006366 - symbol:sym-1 species:6239 "Caenorhabd... 226 1.3e-15 1
UNIPROTKB|A1A4H9 - symbol:LRRTM1 "Leucine-rich repeat tra... 223 1.6e-15 1
UNIPROTKB|I3L5J3 - symbol:LRRTM1 "Uncharacterized protein... 223 1.6e-15 1
MGI|MGI:1919006 - symbol:Cpn2 "carboxypeptidase N, polype... 222 2.3e-15 1
RGD|1585921 - symbol:LRRTM1 "leucine rich repeat transmem... 219 4.6e-15 1
UNIPROTKB|F1SRC2 - symbol:CHADL "Uncharacterized protein"... 173 4.9e-15 2
UNIPROTKB|Q86UE6 - symbol:LRRTM1 "Leucine-rich repeat tra... 218 5.9e-15 1
MGI|MGI:2389173 - symbol:Lrrtm1 "leucine rich repeat tran... 218 5.9e-15 1
MGI|MGI:1921738 - symbol:Lrrc15 "leucine rich repeat cont... 218 7.3e-15 1
UNIPROTKB|F1LRE2 - symbol:Igfals "Insulin-like growth fac... 217 1.0e-14 1
UNIPROTKB|P22792 - symbol:CPN2 "Carboxypeptidase N subuni... 214 1.8e-14 1
UNIPROTKB|F1NHG5 - symbol:SLIT2 "Uncharacterized protein"... 149 2.0e-14 3
FB|FBgn0261269 - symbol:conv "convoluted" species:7227 "D... 217 2.7e-14 1
TAIR|locus:2197563 - symbol:AT1G33590 species:3702 "Arabi... 211 2.9e-14 1
UNIPROTKB|F1NR92 - symbol:SLIT2 "Uncharacterized protein"... 142 3.6e-14 3
UNIPROTKB|E1BP10 - symbol:SLIT1 "Uncharacterized protein"... 147 6.1e-14 3
RGD|68429 - symbol:Igfals "insulin-like growth factor bin... 210 6.2e-14 1
UNIPROTKB|Q7Z2Q7 - symbol:LRRC70 "Leucine-rich repeat-con... 210 6.6e-14 1
RGD|69310 - symbol:Slit2 "slit homolog 2 (Drosophila)" sp... 146 7.6e-14 3
UNIPROTKB|F1LS74 - symbol:Slit1 "Slit homolog 1 protein" ... 147 8.1e-14 3
WB|WBGene00022129 - symbol:lron-11 species:6239 "Caenorha... 208 8.5e-14 1
UNIPROTKB|Q5T0V0 - symbol:SLIT1 "Slit homolog 1 protein" ... 146 9.3e-14 3
UNIPROTKB|F1S8Z0 - symbol:SLIT1 "Uncharacterized protein"... 147 9.8e-14 3
RGD|69307 - symbol:Slit1 "slit homolog 1 (Drosophila)" sp... 147 1.1e-13 3
UNIPROTKB|O88279 - symbol:Slit1 "Slit homolog 1 protein" ... 147 1.1e-13 3
TAIR|locus:2197586 - symbol:AT1G33600 species:3702 "Arabi... 206 1.1e-13 1
UNIPROTKB|O75093 - symbol:SLIT1 "Slit homolog 1 protein" ... 146 1.1e-13 3
UNIPROTKB|F1NEL3 - symbol:LGR4 "Uncharacterized protein" ... 210 1.5e-13 1
UNIPROTKB|F1MT22 - symbol:LGR5 "Uncharacterized protein" ... 209 1.6e-13 1
FB|FBgn0259677 - symbol:CG42346 species:7227 "Drosophila ... 209 1.6e-13 2
UNIPROTKB|J9NZ68 - symbol:SLIT2 "Uncharacterized protein"... 142 1.7e-13 2
MGI|MGI:1315203 - symbol:Slit1 "slit homolog 1 (Drosophil... 145 1.8e-13 3
UNIPROTKB|F1PSS7 - symbol:SLIT1 "Uncharacterized protein"... 144 1.8e-13 3
UNIPROTKB|F1P8A1 - symbol:SLIT2 "Uncharacterized protein"... 145 1.8e-13 3
UNIPROTKB|F1MLX5 - symbol:LGR4 "Uncharacterized protein" ... 209 1.9e-13 1
FB|FBgn0004364 - symbol:18w "18 wheeler" species:7227 "Dr... 210 2.2e-13 1
MGI|MGI:107973 - symbol:Igfals "insulin-like growth facto... 205 2.3e-13 1
UNIPROTKB|P35858 - symbol:IGFALS "Insulin-like growth fac... 205 2.3e-13 1
TAIR|locus:2066306 - symbol:AT2G26380 species:3702 "Arabi... 203 2.3e-13 1
MGI|MGI:1315205 - symbol:Slit2 "slit homolog 2 (Drosophil... 144 2.8e-13 3
UNIPROTKB|Q6NUI6 - symbol:CHADL "Chondroadherin-like prot... 160 3.6e-13 2
ZFIN|ZDB-GENE-030722-4 - symbol:slit1b "slit homolog 1b (... 149 4.2e-13 3
UNIPROTKB|O94813 - symbol:SLIT2 "Slit homolog 2 protein" ... 142 4.5e-13 3
UNIPROTKB|F1MMM6 - symbol:SLIT3 "Uncharacterized protein"... 136 4.5e-13 3
UNIPROTKB|F1MLJ7 - symbol:SLIT2 "Uncharacterized protein"... 143 4.7e-13 3
ZFIN|ZDB-GENE-050506-80 - symbol:lrrtm1 "leucine rich rep... 201 4.8e-13 1
UNIPROTKB|F1Q3G2 - symbol:SLIT3 "Uncharacterized protein"... 142 5.1e-13 3
ZFIN|ZDB-GENE-010306-3 - symbol:slit2 "slit (Drosophila) ... 157 5.5e-13 3
FB|FBgn0085397 - symbol:Fili "Fish-lips" species:7227 "Dr... 202 6.9e-13 1
FB|FBgn0034476 - symbol:Toll-7 "Toll-7" species:7227 "Dro... 205 8.1e-13 1
UNIPROTKB|F1MJZ4 - symbol:IGFALS "Uncharacterized protein... 200 8.2e-13 1
MGI|MGI:1315202 - symbol:Slit3 "slit homolog 3 (Drosophil... 142 8.5e-13 3
FB|FBgn0034083 - symbol:lbk "lambik" species:7227 "Drosop... 204 8.7e-13 1
FB|FBgn0013272 - symbol:Gp150 "Gp150" species:7227 "Droso... 203 9.2e-13 1
ZFIN|ZDB-GENE-030722-3 - symbol:slit1a "slit homolog 1a (... 142 1.2e-12 2
WB|WBGene00010621 - symbol:egg-6 species:6239 "Caenorhabd... 201 1.3e-12 1
FB|FBgn0029114 - symbol:Tollo "Tollo" species:7227 "Droso... 202 1.6e-12 1
UNIPROTKB|E2RPH7 - symbol:ECM2 "Uncharacterized protein" ... 198 1.7e-12 1
UNIPROTKB|Q1KS52 - symbol:ALS "Acid-labile subunit" speci... 197 1.8e-12 1
FB|FBgn0033250 - symbol:CG14762 species:7227 "Drosophila ... 194 2.3e-12 1
ZFIN|ZDB-GENE-031113-8 - symbol:lrrc15 "leucine rich repe... 195 2.6e-12 1
MGI|MGI:2389180 - symbol:Lrrtm4 "leucine rich repeat tran... 195 2.8e-12 1
RGD|1560707 - symbol:Lrrtm4 "leucine rich repeat transmem... 195 2.8e-12 1
TAIR|locus:2074633 - symbol:RLP35 "AT3G11080" species:370... 185 2.8e-12 3
FB|FBgn0028888 - symbol:CG4168 species:7227 "Drosophila m... 201 3.1e-12 2
ZFIN|ZDB-GENE-080327-14 - symbol:lrrtm4l2 "leucine rich r... 192 3.4e-12 1
UNIPROTKB|Q86VH4 - symbol:LRRTM4 "Leucine-rich repeat tra... 194 3.6e-12 1
UNIPROTKB|F1LN28 - symbol:Slit2 "Slit homolog 2 protein" ... 145 3.8e-12 3
FB|FBgn0010452 - symbol:trn "tartan" species:7227 "Drosop... 195 4.1e-12 1
MGI|MGI:1891468 - symbol:Lgr4 "leucine-rich repeat-contai... 196 4.6e-12 1
RGD|69311 - symbol:Slit3 "slit homolog 3 (Drosophila)" sp... 141 4.9e-12 3
UNIPROTKB|O88280 - symbol:Slit3 "Slit homolog 3 protein" ... 141 4.9e-12 3
FB|FBgn0052055 - symbol:CG32055 species:7227 "Drosophila ... 192 5.0e-12 1
UNIPROTKB|E1C7Z9 - symbol:E1C7Z9 "Uncharacterized protein... 137 5.0e-12 3
UNIPROTKB|F1S5C4 - symbol:SLIT2 "Uncharacterized protein"... 127 5.4e-12 2
ZFIN|ZDB-GENE-080327-15 - symbol:lrrtm4l1 "leucine rich r... 192 5.7e-12 1
UNIPROTKB|O75094 - symbol:SLIT3 "Slit homolog 3 protein" ... 145 5.9e-12 3
UNIPROTKB|E1BG29 - symbol:GP5 "Uncharacterized protein" s... 192 5.9e-12 1
UNIPROTKB|J3KNP3 - symbol:SLIT3 "Slit homolog 3 protein" ... 145 6.0e-12 3
UNIPROTKB|F1RR92 - symbol:SLIT3 "Uncharacterized protein"... 140 6.7e-12 3
UNIPROTKB|Q9BXB1 - symbol:LGR4 "Leucine-rich repeat-conta... 194 7.6e-12 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 194 9.2e-12 1
ZFIN|ZDB-GENE-041111-75 - symbol:lrig2 "leucine-rich repe... 193 1.1e-11 1
UNIPROTKB|F1P9F0 - symbol:LGR4 "Uncharacterized protein" ... 192 1.2e-11 1
RGD|1307733 - symbol:Lgr5 "leucine rich repeat containing... 191 1.5e-11 1
ZFIN|ZDB-GENE-040220-5 - symbol:tlr22 "toll-like receptor... 191 1.6e-11 1
UNIPROTKB|Q8TF66 - symbol:LRRC15 "Leucine-rich repeat-con... 188 1.6e-11 1
ZFIN|ZDB-GENE-080327-8 - symbol:lrrtm2 "leucine rich repe... 187 1.9e-11 1
MGI|MGI:2443955 - symbol:Lrig3 "leucine-rich repeats and ... 190 2.6e-11 1
UNIPROTKB|Q86VH5 - symbol:LRRTM3 "Leucine-rich repeat tra... 186 2.7e-11 1
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 179 3.1e-11 2
UNIPROTKB|O94769 - symbol:ECM2 "Extracellular matrix prot... 186 3.7e-11 1
UNIPROTKB|F1NF14 - symbol:SLIT3 "Uncharacterized protein"... 138 4.4e-11 2
WARNING: Descriptions of 597 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0243486 [details] [associations]
symbol:rdo "reduced ocelli" species:7227 "Drosophila
melanogaster" [GO:0008056 "ocellus development" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
GO:GO:0008056 EMBL:BT004502 RefSeq:NP_609861.1 UniGene:Dm.21796
SMR:Q9VJA9 MINT:MINT-990018 STRING:Q9VJA9
EnsemblMetazoa:FBtr0081029 GeneID:35077 KEGG:dme:Dmel_CG15151
UCSC:CG15151-RA CTD:35077 FlyBase:FBgn0243486 InParanoid:Q9VJA9
OMA:FRGQDNL OrthoDB:EOG4CZ8WX GenomeRNAi:35077 NextBio:791738
Uniprot:Q9VJA9
Length = 741
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 159/442 (35%), Positives = 229/442 (51%)
Query: 37 MLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLK 96
+LF + I + + S+ CP C+C++DD RY+ +C +G + + + ++D+ +V+
Sbjct: 6 LLFSLCI-MPAMFSNTKRKCPTECQCSMDDLDRYQAICTKGGLNSLLSPNELDVDVKVII 64
Query: 97 IVPSEENP-NHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITS 155
I P N +TIGP +QF LE L IT+S +PAIG FWG+ LR L+L+ NNIT+
Sbjct: 65 I----RGPRNSITIGPALRQFMKLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITN 120
Query: 156 LLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXX 215
+ + NF+G NL EL L NK+ + SS F HL+DLR L+LA N I +L R
Sbjct: 121 ITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRL 180
Query: 216 XXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXX 275
N + ++ P++F+D+ ELK KCR+C L+ INP MY++L L LDLG N+
Sbjct: 181 KYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKF 240
Query: 276 XXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNL 335
GN V++++ F Q L L L NRLAKV +F LTNL
Sbjct: 241 LDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNL 300
Query: 336 IELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXX-XXXXXXIADMN 394
LD+SYNKL RLE S + N L L ISGN + IADM
Sbjct: 301 TFLDLSYNKLVRLEPQSIRSLSNLLT-LNISGNVLMDLREMRETFELIPQLTHLAIADMG 359
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMS 454
+P GL L++LN+SGN+L + + +L LDLSRN+ G E + +
Sbjct: 360 --TMPVGLLHPFKQLRYLNISGNSLNNTALEVIDPCRELEFLDLSRNQLHGISEDTVLRI 417
Query: 455 EP-KNIHKAAKNSFALQSSMGK 475
+ +N+ + MGK
Sbjct: 418 QGIRNVRLDNNPLICDECHMGK 439
>WB|WBGene00011345 [details] [associations]
symbol:dma-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016358
"dendrite development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 EMBL:Z75713 PIR:T24315
RefSeq:NP_492253.1 ProteinModelPortal:Q22075 SMR:Q22075
STRING:Q22075 PaxDb:Q22075 EnsemblMetazoa:T01G9.3 GeneID:187968
KEGG:cel:CELE_T01G9.3 UCSC:T01G9.3 CTD:187968 WormBase:T01G9.3
HOGENOM:HOG000017308 InParanoid:Q22075 OMA:LTMANTH NextBio:937126
Uniprot:Q22075
Length = 603
Score = 248 (92.4 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 108/418 (25%), Positives = 163/418 (38%)
Query: 44 FLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIP---IGQMDLGTEVLKIVPS 100
FL L + CP +CEC +D + + CR+ + + I + Q+ L L I P
Sbjct: 12 FLVLCSIALPSSCPNLCECDQNDSS-WSVYCRKAIINDTIYAEILNQLPLTLRSLHIQPP 70
Query: 101 EEN--PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLD 158
N L +F L L + N IPA+ +PSL L+L NNI
Sbjct: 71 SNRIGSNKLRWNDNINRFAQLRVLRLINCQIPAMSRSI--RLPSLEVLDLHSNNIEHATM 128
Query: 159 YNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXX 218
NF GM L+ L L N + +P+ VF +L LR LSL++N IS L+
Sbjct: 129 SNFGGMPKLRVLDLSSNHLNILPTGVFTYLRALRSLSLSNNTISDLSTNLLRGLNSLRVL 188
Query: 219 XXXYNDI-VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXX 277
N I +E E+F D+ +L C L +I + + L L +G N
Sbjct: 189 RLDRNPIPIEHINELFTDVSQLDELYLNHCNLSSIYSLALDRIPQLRQLGIGGNNLKMVP 248
Query: 278 XXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL-----AKVTTTAFTNL 332
N I +F + + L L N L + AF +
Sbjct: 249 TKELRSLPQLSVLDLSHNSIQEITACAFCNT-NISKLDLSHNLLGISKDSPFNEDAFRTM 307
Query: 333 TNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIAD 392
L LD+S+N ++ + + L + +SGN ++ +A
Sbjct: 308 P-LRHLDLSFNHMNDFDSKWLGWAQEELTSIALSGNFLKNFEESWTYTLKSLIHLE-LAY 365
Query: 393 MNYTDIPKGLFKMNPHLQFLNLSGNNL----QDIHNLLYQSNIKLTHLDLSRNKFKGF 446
+ IP L HL LN+SGN L +I+ LL N+K D++ N+F F
Sbjct: 366 NHIKFIPVQLPSRYYHLISLNISGNELTYLPDNINTLL--PNVKT--FDITANRFHTF 419
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 248 (92.4 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 82/344 (23%), Positives = 138/344 (40%)
Query: 105 NHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N L + P +F +L EL + + +P + F + L+ L+L+ N + + F
Sbjct: 175 NSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFV 234
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
+ LQ+LYL+ N+I +I FM + LR L L+HNR++ L
Sbjct: 235 KLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLST 294
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I + P FKD+Q L+ + + ++ + L L L L NQ
Sbjct: 295 NSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFL 354
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + E F KL L L+ + L+K+ F++LT+L L + +
Sbjct: 355 GLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQH 414
Query: 343 NKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGL 402
N + +E SF + + L +L + N + ++ DI +
Sbjct: 415 NAISTIEDQSFREL-HELLELDLKHNRLSHLSPQLFVGLSNLEYLF-LSFNQIMDISQNT 472
Query: 403 FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
F L +L+LS N L + N + L +L L N + F
Sbjct: 473 FSPLRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNNSLETF 516
Score = 228 (85.3 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 98/437 (22%), Positives = 164/437 (37%)
Query: 56 CPYMCECALDDRGR-YEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQ 114
CP C C+LDD + C G +P D T I N L F+
Sbjct: 36 CPSPCACSLDDYSEELNVFCS-GRNLTQLPD---DFPTNAKAIWLDGNNFTQLPAAA-FR 90
Query: 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
L+ L + +S + A+ H F G+ SL +L+L N + L + F NL L L+
Sbjct: 91 NLSGLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNN 150
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
N + +F LS+L L+L N + L + N + + ++F
Sbjct: 151 NLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFC 210
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
+ ELK L+ I ++ L L L L NQ
Sbjct: 211 SLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSH 270
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + E +F L VL L N + + F +L L EL + +N++ L +FD
Sbjct: 271 NRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFD 330
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ L L ++ N +Q A+ T +P+ +F+ L L+L
Sbjct: 331 GL-GQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKT-LPEYVFEGVTKLHSLHL 388
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAAKNSFALQSSMG 474
+ L I + S L L L N +++S+ + +H+ + L+ +
Sbjct: 389 EHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSF-----RELHELLE--LDLKHNRL 441
Query: 475 KNAEYAVFIASSSISYL 491
+ +F+ S++ YL
Sbjct: 442 SHLSPQLFVGLSNLEYL 458
Score = 203 (76.5 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 87/367 (23%), Positives = 151/367 (41%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFL-YLLHSSASVMCPYMCECALDD 66
+S L L+L +N +V + ++F D+ + L L YL H C+L +
Sbjct: 164 LSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLF---------CSLTE 214
Query: 67 RGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLT-IGP-IFQQFQHLEELHI 124
++ G+ I I ++ ++ K+ N N + I P F + L L +
Sbjct: 215 LKELDL---SGNALKGIKI---NIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDL 268
Query: 125 TNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSV 184
+++ + ++ F G+ SL L L+ N+ITSL FK + L+EL L N+I S+
Sbjct: 269 SHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERT 328
Query: 185 FMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKC 244
F L L VLSL +N++ + N I + +F+ + +L +
Sbjct: 329 FDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHL 388
Query: 245 RSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKS 304
L I +S L L L L +N N + +
Sbjct: 389 EHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQL 448
Query: 305 FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLK 364
F L+ L L N++ ++ F+ L L LD+S+N+L L+ A + N LR L
Sbjct: 449 FVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLAN-LRYLS 507
Query: 365 ISGNNIQ 371
+ N+++
Sbjct: 508 LRNNSLE 514
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 73/339 (21%), Positives = 137/339 (40%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F +P+LR L L N + L F + L+EL L N ++ I ++F+ L L+ L L
Sbjct: 185 FHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYL 244
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
+N+I+ +APR +N + + + F + L + + + ++ P
Sbjct: 245 NNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRT 304
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L L L LG+N+ N I +F + + V+ L
Sbjct: 305 FKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHL 364
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXX 376
N + + F +T L L + ++ L ++ +F + SLR L + N I
Sbjct: 365 SANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSL-TSLRRLFLQHNAISTIEDQ 423
Query: 377 XXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHL 436
+ + + LF +L++L LS N + DI + +L L
Sbjct: 424 SFRELHELLELD-LKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWL 482
Query: 437 DLSRNKFKGFDEKSYIMSEPKNIHKAAKNSFALQS-SMG 474
DLS N+ D ++++ N+ + + +L++ S+G
Sbjct: 483 DLSHNQLATLDNA--VITQLANLRYLSLRNNSLETFSVG 519
Score = 181 (68.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 66/270 (24%), Positives = 110/270 (40%)
Query: 105 NHLTIGPIFQQ-FQHLEELHI----TNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDY 159
+H + +++ F L LH+ TNS I ++ F + L L L HN I SL +
Sbjct: 269 SHNRLTSLYEDTFLGLLSLHVLRLSTNS-ITSLRPRTFKDLQFLEELQLGHNRIWSLAER 327
Query: 160 NFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXX 219
F G+ L+ L L+ N+++ I + F+ L ++ V+ L+ N I L
Sbjct: 328 TFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLH 387
Query: 220 XXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXX 279
++ + +I F + L+ + + I + L +L+ LDL +N+
Sbjct: 388 LEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQ 447
Query: 280 XXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELD 339
N I + +FS +L L L N+LA + T L NL L
Sbjct: 448 LFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRYLS 507
Query: 340 ISYNKLDRLEVASFDPIENSLRDLKISGNN 369
+ N L+ V P +L L + GNN
Sbjct: 508 LRNNSLETFSVGFLCP-SFTLEQLWLGGNN 536
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 60/252 (23%), Positives = 106/252 (42%)
Query: 2 EFTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCE 61
E T + + L L LS N I + P FKD+Q FL L + + + E
Sbjct: 278 EDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQ----------FLEELQLGHNRIWS-LAE 326
Query: 62 CALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEE 121
D G+ E++ + I G LG + ++ N +F+ L
Sbjct: 327 RTFDGLGQLEVLSLNNNQLQDIKAGAF-LGLYNVAVMHLSANCIKTLPEYVFEGVTKLHS 385
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
LH+ +S + I + F + SLR L L HN I+++ D +F+ + L EL L N++ +
Sbjct: 386 LHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLS 445
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
+F+ LS+L L L+ N+I ++ +N + ++ + + L+
Sbjct: 446 PQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRY 505
Query: 242 FKCRSCGLENIN 253
R+ LE +
Sbjct: 506 LSLRNNSLETFS 517
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 243 (90.6 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 92/371 (24%), Positives = 157/371 (42%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNL-QELY 171
F + L L + N+ I I G+ +L+ LNL+ N I +L F + QE+Y
Sbjct: 297 FGTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVY 356
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISK--LAPRXXXXXXXXXXXXXXYNDIVEIN 229
L N I + +F +L L+ L L+ N+I+ + +N + ++
Sbjct: 357 LQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLE 416
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
PEIF D+ L+ R LENI ++ + +L L L +N+
Sbjct: 417 PEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSL 476
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
N + +F + LQ L L N+L K A N+ +L +D+ N + +E
Sbjct: 477 LSLDNNALIGVHPDAFRNCSALQDLNLNGNQL-KTVPLALRNMRHLRTVDLGENMITVME 535
Query: 350 VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
++F + N L L++ GN ++ +A + G F+M +
Sbjct: 536 DSAFKGLGN-LYGLRLIGNYLENITMHTFRDLPNLQILN-LARNRIAVVEPGAFEMTSSI 593
Query: 410 QFLNLSGNNLQDIHNLLYQSNI-KLTHLDLSRNKFKGFDEKSYIMSEPK--NIHK----A 462
Q + L GN L DI+ L SN+ L L++S N+ + FD ++ S + ++HK +
Sbjct: 594 QAVRLDGNELNDINGLF--SNMPSLLWLNISDNRLESFDY-GHVPSTLQWLDLHKNRLSS 650
Query: 463 AKNSFALQSSM 473
N F L S +
Sbjct: 651 LSNRFGLDSEL 661
Score = 202 (76.2 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 73/297 (24%), Positives = 128/297 (43%)
Query: 80 ANPIPIGQMDLGTEVLKIVPSE--ENPNHLTIGP-IFQQFQHLEELHITNSFIPA--IGF 134
+N I +L E KI+ +N + + P +F L+ L ++ + I + I
Sbjct: 334 SNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDK 393
Query: 135 HPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVL 194
+ F G+ L LNL+HN +T L F + LQ L L N++E+I + F +++L L
Sbjct: 394 NTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTL 453
Query: 195 SLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINP 254
L+HN++ L N ++ ++P+ F++ L+ L+ + P
Sbjct: 454 LLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTV-P 512
Query: 255 MMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVL 314
+ + L +DLG N GN+ I +F LQ+L
Sbjct: 513 LALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQIL 572
Query: 315 CLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L RNR+A V AF +++ + + N+L+ + F + SL L IS N ++
Sbjct: 573 NLARNRIAVVEPGAFEMTSSIQAVRLDGNELNDIN-GLFSNMP-SLLWLNISDNRLE 627
Score = 183 (69.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 81/328 (24%), Positives = 134/328 (40%)
Query: 119 LEELHIT-NSFI--PAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN 175
LE L ++ N F+ PA GF + LR L++ +N I+ + D G+ NLQ L L N
Sbjct: 279 LEYLDVSHNDFVVLPANGFGT---LRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSN 335
Query: 176 KIESIPSSVFMHLSDL-RVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE--INPEI 232
KI ++P+ +F + + + + L +N IS L P+ N I I+
Sbjct: 336 KIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNT 395
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
F + L L + P ++S L L L+L +NQ
Sbjct: 396 FVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLL 455
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N + + + + L +L L N L V AF N + L +L+++ N+L + +A
Sbjct: 456 SHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLAL 515
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD-IPKGLFKMNPHLQF 411
+ LR + + N I I NY + I F+ P+LQ
Sbjct: 516 RNM--RHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIG--NYLENITMHTFRDLPNLQI 571
Query: 412 LNLSGNNLQDIHNLLYQ--SNIKLTHLD 437
LNL+ N + + ++ S+I+ LD
Sbjct: 572 LNLARNRIAVVEPGAFEMTSSIQAVRLD 599
Score = 160 (61.4 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 70/285 (24%), Positives = 121/285 (42%)
Query: 91 GTEVLKIVPSEENPNHLTIGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
G VL ++ S +N + + P F+ L++L++ + + + + LR ++L
Sbjct: 470 GLYVLSLL-SLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPL-ALRNMRHLRTVDLG 527
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
N IT + D FKG+ NL L L N +E+I F L +L++L+LA NRI+ + P
Sbjct: 528 ENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAF 587
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYS-ILADLIYLDL 268
N++ +IN +F ++ L LE+ + Y + + L +LDL
Sbjct: 588 EMTSSIQAVRLDGNELNDING-LFSNMPSLLWLNISDNRLESFD---YGHVPSTLQWLDL 643
Query: 269 GYNQXXXXXXXXXXXXXXXXXXXXXG-NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTT 327
N+ N I S + +L L L N + V
Sbjct: 644 HKNRLSSLSNRFGLDSELKLQTLDVSFNQLQRIGPSSIPNSIEL--LFLNDNLITTVDPD 701
Query: 328 AFTNLTNLIELDISYNKLDRLEVASFD--PI--ENSLRDLKISGN 368
F + TNL +D+ N++ L++ S P+ +L + I GN
Sbjct: 702 TFMHKTNLTRVDLYANQITTLDIKSLRILPVWEHRALPEFYIGGN 746
Score = 153 (58.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 59/202 (29%), Positives = 87/202 (43%)
Query: 1 MEFTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMC 60
M+ I+ L + + +Y ++E P+ F T F V + CP C
Sbjct: 772 MDLETIYCKLLNNRERAYIPLIEAEPKHFLCTYKTHC-FAVCHCCEFDACDCEMTCPTNC 830
Query: 61 ECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI-GPIFQQFQHL 119
C D IV G + +P ++ + T L I + N + + G F ++L
Sbjct: 831 TCFHDQTWSTNIVECSGAAYSEMP-RRVPMDTSELYI----DGNNFVELAGHSFLGRKNL 885
Query: 120 EELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES 179
L+ NS + I F G+ L L+L N+I SL F + NL+ELYL NKI S
Sbjct: 886 AVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFHNLENLRELYLQSNKIAS 945
Query: 180 IPSSVFMHLSDLRVLSLAHNRI 201
I + F L L VL L NR+
Sbjct: 946 IANGSFQMLRKLEVLRLDGNRL 967
Score = 152 (58.6 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 50/188 (26%), Positives = 84/188 (44%)
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND 224
++L+ L + N +P++ F L LRVLS+ +N IS +A + N
Sbjct: 277 LDLEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNK 336
Query: 225 IVEINPEIFKDIQEL-KTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXX 283
IV + E+F + ++ + ++ + +NP ++S L L LDL NQ
Sbjct: 337 IVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTF 396
Query: 284 XXXXXXXXXXGNHFPVI-LEKS-FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
+H + LE FS + LQ+L L+ N+L + F + NL L +S
Sbjct: 397 VGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLS 456
Query: 342 YNKLDRLE 349
+NKL L+
Sbjct: 457 HNKLKYLD 464
Score = 131 (51.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 63/310 (20%), Positives = 118/310 (38%)
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
+L+ LNL HN + ++ F M NL L L NK++ + + L L +LSL +N +
Sbjct: 425 TLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNAL 484
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
+ P N + + P ++++ L+T + + + L
Sbjct: 485 IGVHPDAFRNCSALQDLNLNGNQLKTV-PLALRNMRHLRTVDLGENMITVMEDSAFKGLG 543
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L L L N N V+ +F +Q + L N L
Sbjct: 544 NLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNEL 603
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXX 381
+ F+N+ +L+ L+IS N RLE + + ++L+ L + N +
Sbjct: 604 NDINGL-FSNMPSLLWLNISDN---RLESFDYGHVPSTLQWLDLHKNRLSSLSNRFGLDS 659
Query: 382 XXXXXXXXIADMNYTDIPK-GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSR 440
D+++ + + G + ++ L L+ N + + + LT +DL
Sbjct: 660 ELKLQTL---DVSFNQLQRIGPSSIPNSIELLFLNDNLITTVDPDTFMHKTNLTRVDLYA 716
Query: 441 NKFKGFDEKS 450
N+ D KS
Sbjct: 717 NQITTLDIKS 726
Score = 113 (44.8 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 29/86 (33%), Positives = 48/86 (55%)
Query: 121 ELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES 179
EL+I N+F+ G H F G +L L ++N+ + + F G+ L L+L+ N I S
Sbjct: 863 ELYIDGNNFVELAG-HSFLGRKNLAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIIS 921
Query: 180 IPSSVFMHLSDLRVLSLAHNRISKLA 205
+ + F +L +LR L L N+I+ +A
Sbjct: 922 LEGNEFHNLENLRELYLQSNKIASIA 947
Score = 99 (39.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 114 QQFQHL---EELHITNSFIPAIGFHPFWGVPSLRYLNL-THNNITSLLDYN-----FKGM 164
Q F HL ++L I + +G G+ LR L L THN + L++ F
Sbjct: 140 QSFAHLVRLQQLSIQYCKLGRLGRQVLDGLEQLRNLTLRTHNILWPALNFEIEADAFSVT 199
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
L+ L L N I S+P ++F LS+L L+++ NR+
Sbjct: 200 RRLERLDLSSNNIWSLPDNIFCTLSELSALNMSENRL 236
Score = 92 (37.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN+F + SF + L VL + +A + T F+ L L+ L + N + LE F
Sbjct: 868 GNNFVELAGHSFLGRKNLAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEF 927
Query: 354 DPIENSLRDLKISGNNI 370
+EN LR+L + N I
Sbjct: 928 HNLEN-LRELYLQSNKI 943
Score = 81 (33.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 300 ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS 359
I +FS +L +L L+ N + + F NL NL EL + NK+ + SF +
Sbjct: 898 IYNTTFSGLKRLLILHLEDNHIISLEGNEFHNLENLRELYLQSNKIASIANGSFQMLRK- 956
Query: 360 LRDLKISGNNI 370
L L++ GN +
Sbjct: 957 LEVLRLDGNRL 967
Score = 63 (27.2 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 4 TLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
T + + +L L+LS+N + ++ PEIF D+ +L
Sbjct: 395 TFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQIL 429
Score = 52 (23.4 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443
I G F+M L+ L L GN L +N L + L+ N++
Sbjct: 946 IANGSFQMLRKLEVLRLDGNRLMHFEVWQLSANPYLVEISLADNQW 991
Score = 43 (20.2 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
F + LE L ++++ I ++ + F + L LN++ N + + + F+
Sbjct: 196 FSVTRRLERLDLSSNNIWSLPDNIFCTLSELSALNMSENRLQDVNELGFR 245
Score = 42 (19.8 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+L+ LDLS N+I + IF + + + L
Sbjct: 201 RLERLDLSSNNIWSLPDNIFCTLSELSAL 229
Score = 42 (19.8 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKD 31
+S+L +L++S N + ++N F+D
Sbjct: 223 LSELSALNMSENRLQDVNELGFRD 246
Score = 42 (19.8 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 16/84 (19%), Positives = 33/84 (39%)
Query: 394 NYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS--NIKLTHLD------LSRNKFKG 445
N+ ++ F +L L + +N+ I+N + + + HL+ L N+F
Sbjct: 870 NFVELAGHSFLGRKNLAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFHN 929
Query: 446 FDEKSYIMSEPKNIHKAAKNSFAL 469
+ + + I A SF +
Sbjct: 930 LENLRELYLQSNKIASIANGSFQM 953
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
++ + L N I +NP++F ++ L
Sbjct: 352 IQEVYLQNNSISVLNPQLFSNLDQLQAL 379
>UNIPROTKB|E1BX56 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007610 "behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AADN02014722 IPI:IPI00599810 RefSeq:XP_001233729.1
ProteinModelPortal:E1BX56 Ensembl:ENSGALT00000025729 GeneID:771502
KEGG:gga:771502 NextBio:20921702 Uniprot:E1BX56
Length = 521
Score = 230 (86.0 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 58/225 (25%), Positives = 106/225 (47%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L +N+++ L D F G+M L LYLD N I S+ + F L ++ L+L+ N+I++L
Sbjct: 70 LSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLP 129
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN++ + P++F +++L T RS ++ + ++ L +
Sbjct: 130 NNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKF 189
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LD+GYNQ N + F L LCL+RN++ V
Sbjct: 190 LDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKVTIVV 249
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
T + L +LD+S N+++ +E F+ + + L+ L++ N +
Sbjct: 250 NT-LDWIWQLEKLDLSGNEIEYIEPHVFESVPH-LKSLQLDSNRL 292
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 34/127 (26%), Positives = 67/127 (52%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+ G FQ+ + ++EL ++++ I + + F +P+LR ++L++NN+ SL F
Sbjct: 99 NHICSVEGNAFQKLRRVKELTLSSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFH 158
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
G+ L L++ N I+ +P +F L+ L + +N++ LA +
Sbjct: 159 GLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH 218
Query: 223 NDIVEIN 229
ND+V++N
Sbjct: 219 NDLVKVN 225
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/232 (22%), Positives = 97/232 (41%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G+ L +L L HN+I S+ F+ + ++EL L NKI +P++ F + +LR + L
Sbjct: 85 FTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLPNNTFRPMPNLRSVDL 144
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
++N + L P N I + IF+D + LK L+++
Sbjct: 145 SYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNS 204
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
++ L L L L +N N +++ + ++L+ L L
Sbjct: 205 FAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKVTIVVN-TLDWIWQLEKLDL 263
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
N + + F ++ +L L + N+L ++ D + SL + +S N
Sbjct: 264 SGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDSRILDSWK-SLTSISLSAN 314
Score = 136 (52.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 63/255 (24%), Positives = 94/255 (36%)
Query: 122 LHITNSFIPAIGFHPFWGVPSL-----RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
L I + +PA+ G P L R L N+T + N GMM L L +N
Sbjct: 25 LGIFSKMLPAVNS----GCPQLCRCEGRLLYCESLNLTEM-PRNLSGMMGLS---LRYNS 76
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ + F L L L L HN I + N I ++ F+ +
Sbjct: 77 LSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLPNNTFRPM 136
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L++ L+++ P ++ L L L + N N
Sbjct: 137 PNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQ 196
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
+ SF+ FKL L L+ N L KV F L +L L + NK+ + V + D I
Sbjct: 197 LKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKVT-IVVNTLDWI 255
Query: 357 ENSLRDLKISGNNIQ 371
L L +SGN I+
Sbjct: 256 WQ-LEKLDLSGNEIE 269
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 55/255 (21%), Positives = 95/255 (37%)
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
+LS + LSL +N +S+L +N I + F+ ++ +K S
Sbjct: 63 NLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSS 122
Query: 247 CGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFS 306
+ + + + +L +DL YN N + + F
Sbjct: 123 NKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQ 182
Query: 307 SQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKIS 366
L+ L + N+L + +F L L EL + +N L ++ +A F P SL L +
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHF-PRLISLHSLCLR 241
Query: 367 GNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLL 426
N + ++ Y + P +F+ PHL+ L L N L I + +
Sbjct: 242 RNKVTIVVNTLDWIWQLEKLDLSGNEIEYIE-PH-VFESVPHLKSLQLDSNRLTYIDSRI 299
Query: 427 YQSNIKLTHLDLSRN 441
S LT + LS N
Sbjct: 300 LDSWKSLTSISLSAN 314
>UNIPROTKB|E2QW21 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AAEX03010953 RefSeq:XP_540204.1 ProteinModelPortal:E2QW21
Ensembl:ENSCAFT00000012896 GeneID:483089 KEGG:cfa:483089
NextBio:20857544 Uniprot:E2QW21
Length = 522
Score = 229 (85.7 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 58/225 (25%), Positives = 107/225 (47%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L +N+++ L F G+M L LYLD N I S+ F L ++ L+L+ N+I++LA
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLA 129
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN + + P++F +++L T RS ++ + ++ L +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLKF 189
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LD+GYNQ N + F L LCLKRN++A +
Sbjct: 190 LDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLKRNKVA-IV 248
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
++ + NL ++D+S N+++ +E F+ + + L+ L++ N +
Sbjct: 249 VSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPH-LQSLQLDSNRL 292
Score = 145 (56.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/127 (25%), Positives = 65/127 (51%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+ G FQ+ + ++EL ++++ I + F +P+LR ++L++N + +L F
Sbjct: 99 NHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFH 158
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
G+ L L++ N I+ +P +F L+ L + +N++ LA +
Sbjct: 159 GLRKLTTLHMRSNAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH 218
Query: 223 NDIVEIN 229
ND+V++N
Sbjct: 219 NDLVKVN 225
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/232 (21%), Positives = 97/232 (41%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G+ L +L L HN+I S+ F+ + ++EL L N+I + ++ F + +LR + L
Sbjct: 85 FTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDL 144
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
++N++ LAP N I + IF+D + LK L+++
Sbjct: 145 SYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNS 204
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
++ L L L L +N N +++ S + L+ + L
Sbjct: 205 FAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLKRNKVAIVVS-SLDWVWNLEKMDL 263
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
N + + F + +L L + N+L +E + + SL + ++GN
Sbjct: 264 SGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWK-SLTSITLAGN 314
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 56/255 (21%), Positives = 95/255 (37%)
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
+LS L LSL +N +S+L +N I + + F+ ++ +K S
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSS 122
Query: 247 CGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFS 306
+ + + + +L +DL YN+ N + + F
Sbjct: 123 NQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQ 182
Query: 307 SQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKIS 366
L+ L + N+L + +F L L EL + +N L ++ A F P SL L +
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHF-PRLISLHSLCLK 241
Query: 367 GNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLL 426
N + ++ Y + P +F+ PHLQ L L N L I +
Sbjct: 242 RNKVAIVVSSLDWVWNLEKMDLSGNEIEYME-PH-VFETVPHLQSLQLDSNRLTYIEPRI 299
Query: 427 YQSNIKLTHLDLSRN 441
S LT + L+ N
Sbjct: 300 LNSWKSLTSITLAGN 314
Score = 129 (50.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 52/220 (23%), Positives = 84/220 (38%)
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXX 211
N+T +N G++ L L +N + + + F L L L L HN I +
Sbjct: 56 NLTEA-PHNLSGLLGLS---LRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQK 111
Query: 212 XXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
N I ++ F+ + L++ L+ + P ++ L L L + N
Sbjct: 112 LRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSN 171
Query: 272 QXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTN 331
N + SF+ FKL L L+ N L KV F
Sbjct: 172 AIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPR 231
Query: 332 LTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L +L L + NK+ + V+S D + N L + +SGN I+
Sbjct: 232 LISLHSLCLKRNKV-AIVVSSLDWVWN-LEKMDLSGNEIE 269
Score = 41 (19.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+L+ ++LSGN ++ + ++++ L L L N+
Sbjct: 257 NLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNR 291
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 228 (85.3 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 89/357 (24%), Positives = 148/357 (41%)
Query: 105 NHLTIGPI--FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N L + PI FQ +LE L ++N+ + I F +LR L L NN+ S+ + F
Sbjct: 111 NKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFD 170
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
++ L +L L N + +F HL +L+VL L NR+S +
Sbjct: 171 HLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQE 230
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I ++P +F + + L+ + + + P ++ L L L L N
Sbjct: 231 NQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFG 290
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
NH + + +FS +LQVL L N+L ++ AF LTNL EL +
Sbjct: 291 PMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHT 350
Query: 343 NKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGL 402
N L L+ F + N L+++ + N ++ + + N ++P G+
Sbjct: 351 NALQDLDSNVFRSLAN-LQNISLQSNRLRQLPGSIFANVNGLTTIQ-LQNNNLENLPLGI 408
Query: 403 FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNI 459
F HL +NL L D + S+I H L N+ + + + S P N+
Sbjct: 409 FD---HL--VNLCELRLYD-NPWRCDSDILPLHNWLLLNRARLGTDTLPVCSSPANV 459
Score = 201 (75.8 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 78/358 (21%), Positives = 137/358 (38%)
Query: 89 DLGTEVLKIVPSEENPNHL-TIGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYL 146
+L + ++ + N L TI P F+ L L + N+ + + F V +L L
Sbjct: 71 NLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESL 130
Query: 147 NLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L++N + + F NL+EL L N +ESIP F HL L L+L N + L+P
Sbjct: 131 LLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSP 190
Query: 207 RXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
R N + +I F + L+ + + ++P ++ +L L
Sbjct: 191 RLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRL 250
Query: 267 DLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTT 326
L N GN + F L+ L L N + +
Sbjct: 251 YLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLAD 310
Query: 327 TAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXX 386
F++L L L +S+N+L + +F+ + N LR+L + N +Q
Sbjct: 311 NTFSHLNQLQVLILSHNQLTYISPGAFNGLTN-LRELSLHTNALQDLDSNVFRSLANLQN 369
Query: 387 XXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
+ +P +F L + L NNL+++ ++ + L L L N ++
Sbjct: 370 IS-LQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDHLVNLCELRLYDNPWR 426
Score = 200 (75.5 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 69/323 (21%), Positives = 132/323 (40%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L + N+ I + + F + +L L + N +++++ F+ + +L+ L L NK+ +P
Sbjct: 58 LQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLP 117
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
VF +++L L L++N++ ++ P N++ I E F + L
Sbjct: 118 IRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTK 177
Query: 242 FKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVIL 301
+++P ++ L +L L L N+ N +
Sbjct: 178 LNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLS 237
Query: 302 EKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
F + LQ L L N ++++ F L L +L + N L L F P+ N LR
Sbjct: 238 PGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPN-LR 296
Query: 362 DLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQD 421
+L + N+I ++ T I G F +L+ L+L N LQD
Sbjct: 297 ELWLYNNHI-TSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQD 355
Query: 422 IHNLLYQSNIKLTHLDLSRNKFK 444
+ + +++S L ++ L N+ +
Sbjct: 356 LDSNVFRSLANLQNISLQSNRLR 378
Score = 182 (69.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 65/265 (24%), Positives = 123/265 (46%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRG 68
S L+ L L N++ I E F + T L L +S + + P + + G
Sbjct: 149 SNLRELQLHGNNLESIPEEAFDHLVGLTKL-------NLGRNSFTHLSPRLFQ----HLG 197
Query: 69 RYEIVCRRGDMANPIPIGQMD-LGTEVLKIVPSEENPNHLTIGP-IFQQFQHLEELHITN 126
+++ + + IP+G D LG L+ + +EN T+ P +F ++L+ L+++N
Sbjct: 198 NLQVLRLHENRLSDIPMGTFDALGN--LQELALQENQIG-TLSPGLFHNNRNLQRLYLSN 254
Query: 127 SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFM 186
+ I + F +P L L L N++ L F M NL+EL+L N I S+ + F
Sbjct: 255 NHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFS 314
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
HL+ L+VL L+HN+++ ++P N + +++ +F+ + L+ +S
Sbjct: 315 HLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQS 374
Query: 247 CGLENINPMMYSILADLIYLDLGYN 271
L + +++ + L + L N
Sbjct: 375 NRLRQLPGSIFANVNGLTTIQLQNN 399
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 61/277 (22%), Positives = 106/277 (38%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N L + I +P ++F+++S L L + N +S + P N +
Sbjct: 54 NAMSLQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKL 113
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ +F+D+ L++ + L I P +S ++L L L N
Sbjct: 114 RMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLV 173
Query: 286 XXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
N F + + F LQVL L NRL+ + F L NL EL + N++
Sbjct: 174 GLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQI 233
Query: 346 DRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKM 405
L F N L+ L +S N+I + + ++ G+F
Sbjct: 234 GTLSPGLFHNNRN-LQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGN-SLRELSPGVFGP 291
Query: 406 NPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
P+L+ L L N++ + + + +L L LS N+
Sbjct: 292 MPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQ 328
>WB|WBGene00006366 [details] [associations]
symbol:sym-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00690000101816
EMBL:Z79598 EMBL:AJ242473 PIR:T19939 RefSeq:NP_510426.1
UniGene:Cel.8136 ProteinModelPortal:G5EFP4 SMR:G5EFP4
EnsemblMetazoa:C44H4.3 GeneID:181555 KEGG:cel:CELE_C44H4.3
CTD:181555 WormBase:C44H4.3 OMA:NMERFWR NextBio:914424
Uniprot:G5EFP4
Length = 680
Score = 226 (84.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 79/344 (22%), Positives = 143/344 (41%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN-LQELYLDFNKI 177
+ EL + N+ I +G F + ++ L L++N I + D+ F G+ N +QEL L N +
Sbjct: 62 VRELALENADIIEVGPKAFKTL-RIKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNL 120
Query: 178 ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQ 237
+ +P+S L L +LSL N+I + + N I + + F +++
Sbjct: 121 KEVPTSALAGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVK 180
Query: 238 -ELKTFKC-RSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGN 295
L+ +C E + + + + +LI L + YN+ GN
Sbjct: 181 MSLQNLILDNNCMTEFPSKAVRN-MNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGN 239
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDP 355
+ I + + L L L N L + L LD+S+N + F+
Sbjct: 240 NISEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEG 299
Query: 356 IENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLS 415
+E S++ L + N I + + T++ + K P L+ ++LS
Sbjct: 300 LE-SIQHLNLDSNRISAVAPGAFAGTPLLLLW--LPNNCLTEVSQQTLKGAPFLRMVSLS 356
Query: 416 GNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNI 459
NN++++H L + L LDL+ NK KS +S P+N+
Sbjct: 357 NNNIREVHELSFDHLPNLHTLDLANNKIMSLQNKS--LSGPENL 398
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 73/351 (20%), Positives = 144/351 (41%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASV-MCPYMCECALDDRG 68
+++ L L DI+E+ P+ FK ++ ++ + +H A + M E +L +
Sbjct: 61 EVRELALENADIIEVGPKAFKTLRIKKLILSNNR-IEKIHDHAFTGLENVMQELSLSENN 119
Query: 69 RYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSF 128
E+ P + G VL I+ + N F L ++++ +
Sbjct: 120 LKEV-----------PTSAL-AGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQ 167
Query: 129 IPAIGFHPFWGVP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMH 187
I ++ F V SL+ L L +N +T + M NL L++ +NKI +I + F++
Sbjct: 168 ICSMAADTFANVKMSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVN 227
Query: 188 LSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSC 247
L+ L +LSL N IS++ N++ ++ + + ++L+
Sbjct: 228 LTSLSMLSLNGNNISEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFN 287
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
+I M+ L + +L+L N+ N + +++
Sbjct: 288 NFTDITKEMFEGLESIQHLNLDSNRISAVAPGAFAGTPLLLLWLP-NNCLTEVSQQTLKG 346
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
L+++ L N + +V +F +L NL LD++ NK+ L+ S EN
Sbjct: 347 APFLRMVSLSNNNIREVHELSFDHLPNLHTLDLANNKIMSLQNKSLSGPEN 397
>UNIPROTKB|A1A4H9 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
SMART:SM00013 EMBL:BC126503 IPI:IPI00706066 RefSeq:NP_001073773.1
UniGene:Bt.34711 ProteinModelPortal:A1A4H9 PRIDE:A1A4H9
GeneID:538452 KEGG:bta:538452 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 InParanoid:A1A4H9 KO:K16665 OrthoDB:EOG4FN4HG
NextBio:20877367 Uniprot:A1A4H9
Length = 521
Score = 223 (83.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 56/225 (24%), Positives = 107/225 (47%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L +N+++ L F G+M L LYLD N I S+ F L ++ L+L+ N+I++LA
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLA 129
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN + + P++F +++L T R+ ++ + ++ L +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKF 189
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LD+GYNQ N + F L LCL+RN++A +
Sbjct: 190 LDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVA-IV 248
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
++ + NL ++D+S N+++ +E F+ + + L+ L++ N +
Sbjct: 249 VSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPH-LQSLQLDSNRL 292
Score = 145 (56.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/127 (25%), Positives = 65/127 (51%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+ G FQ+ + ++EL ++++ I + F +P+LR ++L++N + +L F
Sbjct: 99 NHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFH 158
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
G+ L L++ N I+ +P +F L+ L + +N++ LA +
Sbjct: 159 GLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH 218
Query: 223 NDIVEIN 229
ND+V++N
Sbjct: 219 NDLVKVN 225
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 51/232 (21%), Positives = 97/232 (41%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G+ L +L L HN+I S+ F+ + ++EL L N+I + ++ F + +LR + L
Sbjct: 85 FTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDL 144
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
++N++ LAP N I + IF+D + LK L+++
Sbjct: 145 SYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNS 204
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
++ L L L L +N N +++ S + L+ + L
Sbjct: 205 FAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVS-SLDWVWNLEKMDL 263
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
N + + F + +L L + N+L +E + + SL + ++GN
Sbjct: 264 SGNEIEYMEPHVFETVPHLQSLQLDSNRLTYVEPRILNSWK-SLTSITLAGN 314
Score = 135 (52.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 55/255 (21%), Positives = 95/255 (37%)
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
+LS L LSL +N +S+L +N I + + F+ ++ +K S
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSS 122
Query: 247 CGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFS 306
+ + + + +L +DL YN+ N + + F
Sbjct: 123 NQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQ 182
Query: 307 SQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKIS 366
L+ L + N+L + +F L L EL + +N L ++ A F P SL L +
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHF-PRLISLHSLCLR 241
Query: 367 GNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLL 426
N + ++ Y + P +F+ PHLQ L L N L + +
Sbjct: 242 RNKVAIVVSSLDWVWNLEKMDLSGNEIEYME-PH-VFETVPHLQSLQLDSNRLTYVEPRI 299
Query: 427 YQSNIKLTHLDLSRN 441
S LT + L+ N
Sbjct: 300 LNSWKSLTSITLAGN 314
Score = 128 (50.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 52/220 (23%), Positives = 84/220 (38%)
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXX 211
N+T +N G++ L L +N + + + F L L L L HN I +
Sbjct: 56 NLTEA-PHNLSGLLGLS---LRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQK 111
Query: 212 XXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
N I ++ F+ + L++ L+ + P ++ L L L + N
Sbjct: 112 LRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRAN 171
Query: 272 QXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTN 331
N + SF+ FKL L L+ N L KV F
Sbjct: 172 AIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPR 231
Query: 332 LTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L +L L + NK+ + V+S D + N L + +SGN I+
Sbjct: 232 LISLHSLCLRRNKV-AIVVSSLDWVWN-LEKMDLSGNEIE 269
Score = 41 (19.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+L+ ++LSGN ++ + ++++ L L L N+
Sbjct: 257 NLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNR 291
>UNIPROTKB|I3L5J3 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 KO:K16665 OMA:EPDLFHG EMBL:CU928791
RefSeq:XP_003125000.1 Ensembl:ENSSSCT00000025495 GeneID:100520483
KEGG:ssc:100520483 Uniprot:I3L5J3
Length = 522
Score = 223 (83.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 56/225 (24%), Positives = 107/225 (47%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L +N+++ L F G+M L LYLD N I S+ F L ++ L+L+ N+I++LA
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLA 129
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN + + P++F +++L T R+ ++ + ++ L +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKF 189
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LD+GYNQ N + F L LCL+RN++A +
Sbjct: 190 LDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVA-IV 248
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
++ + NL ++D+S N+++ +E F+ + + L+ L++ N +
Sbjct: 249 VSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPH-LQSLQLDSNRL 292
Score = 145 (56.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/127 (25%), Positives = 65/127 (51%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+ G FQ+ + ++EL ++++ I + F +P+LR ++L++N + +L F
Sbjct: 99 NHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFH 158
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
G+ L L++ N I+ +P +F L+ L + +N++ LA +
Sbjct: 159 GLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH 218
Query: 223 NDIVEIN 229
ND+V++N
Sbjct: 219 NDLVKVN 225
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/232 (21%), Positives = 97/232 (41%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G+ L +L L HN+I S+ F+ + ++EL L N+I + ++ F + +LR + L
Sbjct: 85 FTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDL 144
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
++N++ LAP N I + IF+D + LK L+++
Sbjct: 145 SYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNS 204
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
++ L L L L +N N +++ S + L+ + L
Sbjct: 205 FAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVS-SLDWVWNLEKMDL 263
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
N + + F + +L L + N+L +E + + SL + ++GN
Sbjct: 264 SGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWK-SLTSITLAGN 314
Score = 136 (52.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 56/255 (21%), Positives = 95/255 (37%)
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
+LS L LSL +N +S+L +N I + + F+ ++ +K S
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSS 122
Query: 247 CGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFS 306
+ + + + +L +DL YN+ N + + F
Sbjct: 123 NQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQ 182
Query: 307 SQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKIS 366
L+ L + N+L + +F L L EL + +N L ++ A F P SL L +
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHF-PRLISLHSLCLR 241
Query: 367 GNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLL 426
N + ++ Y + P +F+ PHLQ L L N L I +
Sbjct: 242 RNKVAIVVSSLDWVWNLEKMDLSGNEIEYME-PH-VFETVPHLQSLQLDSNRLTYIEPRI 299
Query: 427 YQSNIKLTHLDLSRN 441
S LT + L+ N
Sbjct: 300 LNSWKSLTSITLAGN 314
Score = 128 (50.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 52/220 (23%), Positives = 84/220 (38%)
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXX 211
N+T +N G++ L L +N + + + F L L L L HN I +
Sbjct: 56 NLTEA-PHNLSGLLGLS---LRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQK 111
Query: 212 XXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
N I ++ F+ + L++ L+ + P ++ L L L + N
Sbjct: 112 LRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRAN 171
Query: 272 QXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTN 331
N + SF+ FKL L L+ N L KV F
Sbjct: 172 AIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPR 231
Query: 332 LTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L +L L + NK+ + V+S D + N L + +SGN I+
Sbjct: 232 LISLHSLCLRRNKV-AIVVSSLDWVWN-LEKMDLSGNEIE 269
Score = 41 (19.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+L+ ++LSGN ++ + ++++ L L L N+
Sbjct: 257 NLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNR 291
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 100/412 (24%), Positives = 164/412 (39%)
Query: 47 LLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNH 106
LL + + CP C+C GR E+ C +A+ IP D+ + IV E
Sbjct: 13 LLLARLTQPCPVGCDCF----GR-EVFCSDEQLAD-IP---PDIPPHITDIVFVETA--F 61
Query: 107 LTIGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMM 165
T+ F +L ++ N+ + + F G+P L+ L +T + +++L + F +
Sbjct: 62 TTVRTRAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLS 121
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
+L++L LDF+++ +P +F H+ L L L N++ L R N +
Sbjct: 122 SLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLL 181
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
++ F+ + L+ K + L + L+ L L L N
Sbjct: 182 TQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLF 241
Query: 286 XXXXXXXXGN---HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N H PV L FSS L L LK N L + F + L+ L +SY
Sbjct: 242 SLEMLWLQHNAICHLPVSL---FSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSY 298
Query: 343 NKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGL 402
N+L+ + +F + L L +S N I + N T + L
Sbjct: 299 NQLETIPEGAFTNLSR-LVSLTLSHNAI-TDLPEHVFRNLEQLVKLSLDSNNLTALHPAL 356
Query: 403 FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMS 454
F LQ LNLS N L + ++ +N L +L L N ++ SY+ S
Sbjct: 357 FHNLSRLQLLNLSRNQLTTLPGGIFDTNYDLFNLALLGNPWQCDCHLSYLTS 408
Score = 214 (80.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 85/346 (24%), Positives = 138/346 (39%)
Query: 96 KIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITS 155
K+V HL F L++L IT S + + H F + SL L L + +
Sbjct: 77 KVVFLNTQVRHLE-PDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAG 135
Query: 156 LLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXX 215
L + F M L+ L L N++ ++P +F L DLR L+LA N +++L P+
Sbjct: 136 LPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQL-PKGAFQSLTG 194
Query: 216 XXXXXXYNDIVEINPE-IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXX 274
N+++ PE + L+ + ++P ++S L L L L +N
Sbjct: 195 LQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAIC 254
Query: 275 XXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTN 334
N + E F+ L L L N+L + AFTNL+
Sbjct: 255 HLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSR 314
Query: 335 LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMN 394
L+ L +S+N + L F +E ++ L + NN+ ++
Sbjct: 315 LVSLTLSHNAITDLPEHVFRNLEQLVK-LSLDSNNL-TALHPALFHNLSRLQLLNLSRNQ 372
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQ-DIHNLLYQSNIKLTHLDLS 439
T +P G+F N L L L GN Q D H S ++L + +S
Sbjct: 373 LTTLPGGIFDTNYDLFNLALLGNPWQCDCHLSYLTSWLRLYNNQIS 418
>RGD|1585921 [details] [associations]
symbol:LRRTM1 "leucine rich repeat transmembrane neuronal 1"
species:10116 "Rattus norvegicus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA;ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426
"growth cone" evidence=IEA;ISO] [GO:0035418 "protein localization
to synapse" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0050808 "synapse organization" evidence=ISO;IDA]
[GO:0060076 "excitatory synapse" evidence=IDA] [GO:0009986 "cell
surface" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
RGD:1585921 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0007610
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0060076 GO:GO:0035418 EMBL:CH473957
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OrthoDB:EOG4FN4HG
OMA:EPDLFHG IPI:IPI00364927 RefSeq:NP_001102844.1 UniGene:Rn.171424
PRIDE:D4A6D8 Ensembl:ENSRNOT00000007993 GeneID:679668
KEGG:rno:679668 UCSC:RGD:1585921 NextBio:716984 Uniprot:D4A6D8
Length = 523
Score = 219 (82.2 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 56/225 (24%), Positives = 106/225 (47%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L +N+++ L F G+M L LYLD N I S+ F L ++ L+L+ N+I++LA
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELA 129
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN + + P++F +++L T R+ ++ + ++ L +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKF 189
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LD+GYNQ N + F L LCL+RN++A +
Sbjct: 190 LDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLNSLCLRRNKVA-IV 248
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
++ + NL ++D+S N+++ +E F+ + L+ L++ N +
Sbjct: 249 VSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPY-LQSLQLDSNRL 292
Score = 144 (55.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 31/127 (24%), Positives = 65/127 (51%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+ G FQ+ + ++EL ++++ I + F +P+LR ++L++N + +L F
Sbjct: 99 NHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFH 158
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
G+ L L++ N I+ +P +F L+ L + +N++ LA +
Sbjct: 159 GLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH 218
Query: 223 NDIVEIN 229
ND++++N
Sbjct: 219 NDLIKVN 225
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 51/232 (21%), Positives = 96/232 (41%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G+ L +L L HN+I S+ F+ + ++EL L N+I + ++ F + +LR + L
Sbjct: 85 FTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDL 144
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
++N++ LAP N I + IF+D + LK L+++
Sbjct: 145 SYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNS 204
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
++ L L L L +N N +++ S + L+ + L
Sbjct: 205 FAGLFKLTELHLEHNDLIKVNFAHFPRLISLNSLCLRRNKVAIVVS-SLDWVWNLEKMDL 263
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
N + + F + L L + N+L +E + + SL + ++GN
Sbjct: 264 SGNEIEYMEPHVFETVPYLQSLQLDSNRLTYIEPRILNSWK-SLTSITLAGN 314
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 55/255 (21%), Positives = 95/255 (37%)
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
+LS L LSL +N +S+L +N I + + F+ ++ +K S
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSS 122
Query: 247 CGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFS 306
+ + + + +L +DL YN+ N + + F
Sbjct: 123 NQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQ 182
Query: 307 SQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKIS 366
L+ L + N+L + +F L L EL + +N L ++ A F P SL L +
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHF-PRLISLNSLCLR 241
Query: 367 GNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLL 426
N + ++ Y + P +F+ P+LQ L L N L I +
Sbjct: 242 RNKVAIVVSSLDWVWNLEKMDLSGNEIEYME-PH-VFETVPYLQSLQLDSNRLTYIEPRI 299
Query: 427 YQSNIKLTHLDLSRN 441
S LT + L+ N
Sbjct: 300 LNSWKSLTSITLAGN 314
Score = 130 (50.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 53/220 (24%), Positives = 84/220 (38%)
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXX 211
N+T +N G++ L L +N + + + F L L L L HN I +
Sbjct: 56 NLTEA-PHNLSGLLGLS---LRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQK 111
Query: 212 XXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
N I E+ F+ + L++ L+ + P ++ L L L + N
Sbjct: 112 LRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRAN 171
Query: 272 QXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTN 331
N + SF+ FKL L L+ N L KV F
Sbjct: 172 AIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPR 231
Query: 332 LTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L +L L + NK+ + V+S D + N L + +SGN I+
Sbjct: 232 LISLNSLCLRRNKV-AIVVSSLDWVWN-LEKMDLSGNEIE 269
Score = 40 (19.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+L+ ++LSGN ++ + ++++ L L L N+
Sbjct: 257 NLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNR 291
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 173 (66.0 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 61/246 (24%), Positives = 105/246 (42%)
Query: 33 QDTTMLFQVTIFLYL--LHSSASVMCPYMCECALDDRGRYEIVCRRGDMA---NPIP-IG 86
Q +++ + + L L + +A+ CP C C D R + CR ++ N IP +
Sbjct: 5 QSVSLVLLLPLLLPLGPIWHAAAQRCPQTCIC---DNSRRHVACRHQNLTEVPNAIPELT 61
Query: 87 Q-MDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRY 145
Q +DL VL+++P P FQ +L L + + + + F G+ L
Sbjct: 62 QRLDLRGNVLRVIP----P------AAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLLL 111
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
LNL N +++L G+ +L+ L L+ N +E + F L L L+LAHN + L
Sbjct: 112 LNLASNRLSALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYLP 171
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
P +N + + PE + L+ L+++ + S L
Sbjct: 172 PMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLAR 231
Query: 266 LDLGYN 271
L+LG+N
Sbjct: 232 LELGHN 237
Score = 138 (53.6 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 56/249 (22%), Positives = 96/249 (38%)
Query: 120 EELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES 179
+ L + + + I F +P L +L+L H + + + F+G+ L L L N++ +
Sbjct: 62 QRLDLRGNVLRVIPPAAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSA 121
Query: 180 IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQEL 239
+P L LR L L N + +L P +N +V + P F+ +
Sbjct: 122 LPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRA 181
Query: 240 KTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPV 299
+ + L + P + L L L L +N+ N F
Sbjct: 182 RWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTY 241
Query: 300 ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS 359
E+ + L+ L L+ L + AF + L LD+ N+LD L + P
Sbjct: 242 AGEEDGLALPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQLDAL-LPPQGP--GQ 298
Query: 360 LRDLKISGN 368
LR L++ GN
Sbjct: 299 LRRLQLQGN 307
Score = 127 (49.8 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 51/194 (26%), Positives = 79/194 (40%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVCR-RGDMANPIPIGQMDLGTEVLKIVPSEENPNHLT 108
+ A+ CP C C + R C RG A +P G + T++L + NH
Sbjct: 383 AGAARPCPRACVCVPESR---HSGCEARGLRA--VPRGFPN-DTQLLDL-----RRNHFP 431
Query: 109 IGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
+ P FQ L LH+ + I + G+ SL YL L+ N ++ L +G
Sbjct: 432 LVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSGLSATALEGAPR 491
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
L LYL+ N+ +P + L L L L N + +LAP N +
Sbjct: 492 LGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNRLT 551
Query: 227 EINPEIFKDIQELK 240
+++P QEL+
Sbjct: 552 QVSPGALGPAQELE 565
Score = 101 (40.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 35/154 (22%), Positives = 58/154 (37%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L L + + + + F + +L LNL HN + L F+G++ + L L N +
Sbjct: 133 LRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALS 192
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
+ L LR LSL HN + L +N E +
Sbjct: 193 VLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAGEEDGLALPG 252
Query: 239 LKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
L+ + L+ ++P ++ L LDL NQ
Sbjct: 253 LRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQ 286
Score = 100 (40.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 54/242 (22%), Positives = 91/242 (37%)
Query: 14 LDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIV 73
LDL N + I P F+D+ T L L H ++ E A GR ++
Sbjct: 64 LDLRGNVLRVIPPAAFQDLPYLT-------HLDLRHCQVELVA----EGAFRGLGRLLLL 112
Query: 74 CRRGDMANPIPIGQMDLGTEVLKIVPSEENP-NHLTIGPIFQQFQHLEELHITNSFIPAI 132
+ + +P +D G L+ + E N L G F L L++ ++ + +
Sbjct: 113 NLASNRLSALPQEALD-GLGSLRRLELEGNLLEELRPGT-FGALGALATLNLAHNALVYL 170
Query: 133 GFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLR 192
F G+ R+L L+HN ++ L G+ L+ L L N+++S+P L
Sbjct: 171 PPMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLA 230
Query: 193 VLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI 252
L L HN + + + ++P F L T R L+ +
Sbjct: 231 RLELGHNPFTYAGEEDGLALPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQLDAL 290
Query: 253 NP 254
P
Sbjct: 291 LP 292
Score = 97 (39.2 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + +L+ L L RN+L +V T A L L+EL +S N L L+ +F
Sbjct: 547 GNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNPLRALQEGAF 606
Query: 354 DPIENSLRDLKISGNNIQ 371
P+ SL+ L ++ + ++
Sbjct: 607 RPVGRSLQHLFLNSSGLE 624
Score = 90 (36.7 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 35/134 (26%), Positives = 57/134 (42%)
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
L+ L L NRL +V+ A L +L + N+L + + + + +L +L++SGN +
Sbjct: 540 LRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLP-ALLELQLSGNPL 598
Query: 371 QXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK-MNPHLQFLNLSGNNLQDIHNLLYQS 429
+ + I G F + P LQ L L N LQ + L
Sbjct: 599 RALQEGAFRPVGRSLQHLFLNSSGLEQISPGAFSGLGPQLQSLYLQKNQLQALPPLPGLR 658
Query: 430 NIKLTHLDLSRNKF 443
++L +DLS N F
Sbjct: 659 QLEL--IDLSGNPF 670
Score = 76 (31.8 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 36/132 (27%), Positives = 53/132 (40%)
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNN 369
+L L L+RNR +V A L +L L + N +DRL +LR L +SGN
Sbjct: 491 RLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAG-GRALRWLYLSGNR 549
Query: 370 IQXXXXXXXXXXXXXXXXXXIADMNYT-DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQ 428
+ D N ++P + P L L LSGN L+ + ++
Sbjct: 550 LTQVSPGALGPAQELEKLHL--DRNQLPEVPTEALEGLPALLELQLSGNPLRALQEGAFR 607
Query: 429 S-NIKLTHLDLS 439
L HL L+
Sbjct: 608 PVGRSLQHLFLN 619
Score = 65 (27.9 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 34/148 (22%), Positives = 54/148 (36%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
NHFP++ +F +L L L+ + ++ A L +LI L +S N L L + +
Sbjct: 428 NHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSGLSATALE 487
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
L L + N + D + G L++L L
Sbjct: 488 GAPR-LGYLYLERNRF-LQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRWLYL 545
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
SGN L + +L L L RN+
Sbjct: 546 SGNRLTQVSPGALGPAQELEKLHLDRNQ 573
Score = 60 (26.2 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 312 QVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
Q+L L+RN V AF L L+ L + + + LE + + SL L +S N +
Sbjct: 421 QLLDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGL-GSLIYLYLSDNGL 478
Score = 47 (21.6 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 396 TDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443
T++ G L +L LS N L + + +L +L L RN+F
Sbjct: 455 TELEAGALAGLGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLERNRF 502
>UNIPROTKB|Q86UE6 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007610 "behavior" evidence=IEA] [GO:0035418 "protein
localization to synapse" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0060076 "excitatory synapse"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030426
"growth cone" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 EMBL:CH471053 GO:GO:0007610 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0035418 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG EMBL:AY182024
EMBL:AK056644 EMBL:AK290512 EMBL:AY358310 EMBL:BC045113
IPI:IPI00328716 RefSeq:NP_849161.2 UniGene:Hs.591580
ProteinModelPortal:Q86UE6 SMR:Q86UE6 MINT:MINT-7027295
STRING:Q86UE6 PhosphoSite:Q86UE6 DMDM:146330009 PRIDE:Q86UE6
DNASU:347730 Ensembl:ENST00000295057 Ensembl:ENST00000409148
Ensembl:ENST00000417012 Ensembl:ENST00000433224 GeneID:347730
KEGG:hsa:347730 UCSC:uc002sok.1 GeneCards:GC02M080427
H-InvDB:HIX0002207 HGNC:HGNC:19408 MIM:610867 neXtProt:NX_Q86UE6
PharmGKB:PA134887293 InParanoid:Q86UE6 OMA:EPDLFHG PhylomeDB:Q86UE6
GenomeRNAi:347730 NextBio:99250 ArrayExpress:Q86UE6 Bgee:Q86UE6
CleanEx:HS_LRRTM1 Genevestigator:Q86UE6 GermOnline:ENSG00000162951
Uniprot:Q86UE6
Length = 522
Score = 218 (81.8 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 55/225 (24%), Positives = 106/225 (47%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L +N+++ L F G+M L LYLD N I S+ F L ++ L+L+ N+I++L
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLP 129
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN + + P++F +++L T R+ ++ + ++ L +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKF 189
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LD+GYNQ N + F L LCL+RN++A +
Sbjct: 190 LDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVA-IV 248
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
++ + NL ++D+S N+++ +E F+ + + L+ L++ N +
Sbjct: 249 VSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPH-LQSLQLDSNRL 292
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/232 (22%), Positives = 98/232 (42%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G+ L +L L HN+I S+ F+ + ++EL L N+I +P++ F + +LR + L
Sbjct: 85 FTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDL 144
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
++N++ LAP N I + IF+D + LK L+++
Sbjct: 145 SYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNS 204
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
++ L L L L +N N +++ S + L+ + L
Sbjct: 205 FAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVS-SLDWVWNLEKMDL 263
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
N + + F + +L L + N+L +E + + SL + ++GN
Sbjct: 264 SGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWK-SLTSITLAGN 314
Score = 143 (55.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 32/127 (25%), Positives = 65/127 (51%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+ G FQ+ + ++EL ++++ I + F +P+LR ++L++N + +L F
Sbjct: 99 NHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFH 158
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
G+ L L++ N I+ +P +F L+ L + +N++ LA +
Sbjct: 159 GLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH 218
Query: 223 NDIVEIN 229
ND+V++N
Sbjct: 219 NDLVKVN 225
Score = 136 (52.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 56/255 (21%), Positives = 95/255 (37%)
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
+LS L LSL +N +S+L +N I + + F+ ++ +K S
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSS 122
Query: 247 CGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFS 306
+ + + + +L +DL YN+ N + + F
Sbjct: 123 NQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQ 182
Query: 307 SQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKIS 366
L+ L + N+L + +F L L EL + +N L ++ A F P SL L +
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHF-PRLISLHSLCLR 241
Query: 367 GNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLL 426
N + ++ Y + P +F+ PHLQ L L N L I +
Sbjct: 242 RNKVAIVVSSLDWVWNLEKMDLSGNEIEYME-PH-VFETVPHLQSLQLDSNRLTYIEPRI 299
Query: 427 YQSNIKLTHLDLSRN 441
S LT + L+ N
Sbjct: 300 LNSWKSLTSITLAGN 314
Score = 128 (50.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 52/220 (23%), Positives = 84/220 (38%)
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXX 211
N+T +N G++ L L +N + + + F L L L L HN I +
Sbjct: 56 NLTEA-PHNLSGLLGLS---LRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQK 111
Query: 212 XXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
N I ++ F+ + L++ L+ + P ++ L L L + N
Sbjct: 112 LRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRAN 171
Query: 272 QXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTN 331
N + SF+ FKL L L+ N L KV F
Sbjct: 172 AIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPR 231
Query: 332 LTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L +L L + NK+ + V+S D + N L + +SGN I+
Sbjct: 232 LISLHSLCLRRNKV-AIVVSSLDWVWN-LEKMDLSGNEIE 269
Score = 41 (19.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+L+ ++LSGN ++ + ++++ L L L N+
Sbjct: 257 NLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNR 291
>MGI|MGI:2389173 [details] [associations]
symbol:Lrrtm1 "leucine rich repeat transmembrane neuronal 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007610 "behavior"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=ISO] [GO:0030426 "growth
cone" evidence=ISO] [GO:0035418 "protein localization to synapse"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO;IMP] [GO:0060076 "excitatory
synapse" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389173 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0007610 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
GO:GO:0030426 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG OMA:EPDLFHG
EMBL:AY182025 EMBL:AK053345 EMBL:AK053364 EMBL:AK136857
EMBL:BC027803 IPI:IPI00170022 RefSeq:NP_083156.2 UniGene:Mm.292568
ProteinModelPortal:Q8K377 SMR:Q8K377 IntAct:Q8K377 STRING:Q8K377
PhosphoSite:Q8K377 PaxDb:Q8K377 PRIDE:Q8K377
Ensembl:ENSMUST00000020400 Ensembl:ENSMUST00000159616
Ensembl:ENSMUST00000161677 GeneID:74342 KEGG:mmu:74342
UCSC:uc009cjt.1 InParanoid:Q8K377 NextBio:340493 Bgee:Q8K377
CleanEx:MM_LRRTM1 Genevestigator:Q8K377
GermOnline:ENSMUSG00000060780 Uniprot:Q8K377
Length = 522
Score = 218 (81.8 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 56/225 (24%), Positives = 106/225 (47%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L +N+++ L F G+M L LYLD N I S+ F L ++ L+L+ N+I++LA
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELA 129
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN + + P++F +++L T R+ ++ + ++ L +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKF 189
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LD+GYNQ N + F L LCL+RN++A +
Sbjct: 190 LDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNKVA-IV 248
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
++ + NL ++D+S N+++ +E F+ + L+ L++ N +
Sbjct: 249 VSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPY-LQTLQLDSNRL 292
Score = 144 (55.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 31/127 (24%), Positives = 65/127 (51%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+ G FQ+ + ++EL ++++ I + F +P+LR ++L++N + +L F
Sbjct: 99 NHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFH 158
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
G+ L L++ N I+ +P +F L+ L + +N++ LA +
Sbjct: 159 GLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH 218
Query: 223 NDIVEIN 229
ND++++N
Sbjct: 219 NDLIKVN 225
Score = 139 (54.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 51/232 (21%), Positives = 96/232 (41%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G+ L +L L HN+I S+ F+ + ++EL L N+I + ++ F + +LR + L
Sbjct: 85 FTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDL 144
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
++N++ LAP N I + IF+D + LK L+++
Sbjct: 145 SYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNS 204
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
++ L L L L +N N +++ S + L+ + L
Sbjct: 205 FAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNKVAIVVS-SLDWVWNLEKMDL 263
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
N + + F + L L + N+L +E + + SL + ++GN
Sbjct: 264 SGNEIEYMEPHVFETVPYLQTLQLDSNRLTYIEPRILNSWK-SLTSITLAGN 314
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 55/255 (21%), Positives = 95/255 (37%)
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
+LS L LSL +N +S+L +N I + + F+ ++ +K S
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSS 122
Query: 247 CGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFS 306
+ + + + +L +DL YN+ N + + F
Sbjct: 123 NQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQ 182
Query: 307 SQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKIS 366
L+ L + N+L + +F L L EL + +N L ++ A F P SL L +
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHF-PRLISLHSLCLR 241
Query: 367 GNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLL 426
N + ++ Y + P +F+ P+LQ L L N L I +
Sbjct: 242 RNKVAIVVSSLDWVWNLEKMDLSGNEIEYME-PH-VFETVPYLQTLQLDSNRLTYIEPRI 299
Query: 427 YQSNIKLTHLDLSRN 441
S LT + L+ N
Sbjct: 300 LNSWKSLTSITLAGN 314
Score = 130 (50.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 53/220 (24%), Positives = 84/220 (38%)
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXX 211
N+T +N G++ L L +N + + + F L L L L HN I +
Sbjct: 56 NLTEA-PHNLSGLLGLS---LRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQK 111
Query: 212 XXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
N I E+ F+ + L++ L+ + P ++ L L L + N
Sbjct: 112 LRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRAN 171
Query: 272 QXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTN 331
N + SF+ FKL L L+ N L KV F
Sbjct: 172 AIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPR 231
Query: 332 LTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L +L L + NK+ + V+S D + N L + +SGN I+
Sbjct: 232 LISLHSLCLRRNKV-AIVVSSLDWVWN-LEKMDLSGNEIE 269
Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+L+ ++LSGN ++ + ++++ L L L N+
Sbjct: 257 NLEKMDLSGNEIEYMEPHVFETVPYLQTLQLDSNR 291
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 218 (81.8 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 85/352 (24%), Positives = 150/352 (42%)
Query: 76 RGDMANPIPIGQMDLGTEVLKIVPSEENP-NHLTIGPIFQQFQHLEELHITNSFIPAIGF 134
+ ++AN +P +LG+ L+ + N +L + +FQ +LE L ++N+ + I
Sbjct: 86 KNELANIMPGAFRNLGS--LRHLSLANNKLKNLPVR-LFQDVNNLETLLLSNNQLVQIQP 142
Query: 135 HPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVL 194
F +L+ L L NN+ + + F ++ L +L L N + VF HL +L+VL
Sbjct: 143 AQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVL 202
Query: 195 SLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINP 254
L NR+S + N I ++P +F + + L+ + + ++ P
Sbjct: 203 RLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPP 262
Query: 255 MMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVL 314
++ L L L L N NH + + +FS +LQVL
Sbjct: 263 GIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVL 322
Query: 315 CLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXX 374
L N+L+ ++ AF LTNL EL + N L L+ F + N LR++ + N ++
Sbjct: 323 ILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLAN-LRNVSLQNNRLRQLP 381
Query: 375 XXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLL 426
+ + N ++P G+F +L L L N + N+L
Sbjct: 382 GSIFANVNGLMTIQ-LQNNNLENLPLGIFDHLGNLCELRLYDNPWRCDSNIL 432
Score = 199 (75.1 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 70/324 (21%), Positives = 135/324 (41%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L I N+ I + F + +L L + N + +++ F+ + +L+ L L NK++++P
Sbjct: 58 LQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLP 117
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE-IFKDIQELK 240
+F +++L L L++N++ ++ P Y + +E PE +F + L
Sbjct: 118 VRLFQDVNNLETLLLSNNQLVQIQP-AQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLT 176
Query: 241 TFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVI 300
+ G +++P ++ L +L L L N+ N +
Sbjct: 177 KLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTL 236
Query: 301 LEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSL 360
F + LQ L L N ++ + F L +L +L + N L L F P+ N L
Sbjct: 237 SPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPN-L 295
Query: 361 RDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQ 420
R+L + N+I ++ + I G F +L+ L+L N LQ
Sbjct: 296 RELWLYNNHI-TSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQ 354
Query: 421 DIHNLLYQSNIKLTHLDLSRNKFK 444
D+ +++S L ++ L N+ +
Sbjct: 355 DLDGNVFRSLANLRNVSLQNNRLR 378
Score = 191 (72.3 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 73/332 (21%), Positives = 128/332 (38%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ L L + N+ + + F V +L L L++N + + F NL+EL L
Sbjct: 97 FRNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQL 156
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N +E IP VF HL L L+L +N + L+PR N + +I
Sbjct: 157 YGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGT 216
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
F + L+ + + ++P ++ +L L L N
Sbjct: 217 FDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLTL 276
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN + F L+ L L N + + AF++L L L +S+N+L + +
Sbjct: 277 FGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGA 336
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
F+ + N LR+L + N +Q + + +P +F L +
Sbjct: 337 FNGLTN-LRELSLHTNALQDLDGNVFRSLANLRNVS-LQNNRLRQLPGSIFANVNGLMTI 394
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
L NNL+++ ++ L L L N ++
Sbjct: 395 QLQNNNLENLPLGIFDHLGNLCELRLYDNPWR 426
Score = 183 (69.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 53/206 (25%), Positives = 103/206 (50%)
Query: 68 GRYEIVCRRGDMANPIPIGQMD-LGTEVLKIVPSEENPNHLTIGP-IFQQFQHLEELHIT 125
G +++ + + IP+G D LG L+ + +EN T+ P +F ++L+ L+++
Sbjct: 197 GNLQVLRLYENRLSDIPMGTFDALGN--LQELALQENQIG-TLSPGLFHNNRNLQRLYLS 253
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
N+ I + F +P L L L N++ L F M NL+EL+L N I S+P + F
Sbjct: 254 NNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAF 313
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCR 245
HL+ L+VL L+HN++S ++P N + +++ +F+ + L+ +
Sbjct: 314 SHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQ 373
Query: 246 SCGLENINPMMYSILADLIYLDLGYN 271
+ L + +++ + L+ + L N
Sbjct: 374 NNRLRQLPGSIFANVNGLMTIQLQNN 399
Score = 163 (62.4 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 65/258 (25%), Positives = 111/258 (43%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRY 70
L L+L N ++P +F+ + + QV + LY S M + D G
Sbjct: 175 LTKLNLGNNGFTHLSPRVFQHLGN----LQV-LRLYENRLSDIPMGTF------DALGNL 223
Query: 71 EIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIP 130
+ + + + + G + ++ S + +HL G IF Q HL +L + + +
Sbjct: 224 QELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPG-IFMQLPHLNKLTLFGNSLK 282
Query: 131 AIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSD 190
+ F +P+LR L L +N+ITSL D F + LQ L L N++ I F L++
Sbjct: 283 ELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTN 342
Query: 191 LRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE 250
LR LSL N + L N + ++ IF ++ L T + ++ LE
Sbjct: 343 LRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNLE 402
Query: 251 NINPMMYSILADLIYLDL 268
N+ ++ L +L L L
Sbjct: 403 NLPLGIFDHLGNLCELRL 420
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 66/309 (21%), Positives = 117/309 (37%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N L + I +P F+++S L L + N ++ + P N +
Sbjct: 54 NAMSLQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKL 113
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ +F+D+ L+T + L I P +S ++L L L N
Sbjct: 114 KNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLV 173
Query: 286 XXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
N F + + F LQVL L NRL+ + F L NL EL + N++
Sbjct: 174 GLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQI 233
Query: 346 DRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKM 405
L F N L+ L +S N+I + + ++ G+F
Sbjct: 234 GTLSPGLFHNNRN-LQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGN-SLKELSPGVFGP 291
Query: 406 NPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAAKN 465
P+L+ L L N++ + + + +L L LS N+ ++ + N+ + + +
Sbjct: 292 MPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAF--NGLTNLRELSLH 349
Query: 466 SFALQSSMG 474
+ ALQ G
Sbjct: 350 TNALQDLDG 358
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 217 (81.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 78/337 (23%), Positives = 136/337 (40%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+FQ HL +L++ + + + F G+ +L L L N +T L F G+ L+EL
Sbjct: 164 LFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELD 223
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L N + S+ ++VF+HL L+ L L N I+ +APR +N + + +
Sbjct: 224 LSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMED 283
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F + L + + ++ P + L L L LG+N+
Sbjct: 284 TFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLT 343
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N + +FS F + V+ L N L + F L L L + ++ L + +
Sbjct: 344 LNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLH 403
Query: 352 SFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQF 411
+F + + LR L + N+I + T +P+ LF+ HL++
Sbjct: 404 TFAGL-SGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTN-RLTHLPRQLFQGLGHLEY 461
Query: 412 LNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
L LS N L + + + LD+S N + E
Sbjct: 462 LLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAE 498
Score = 208 (78.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 86/376 (22%), Positives = 149/376 (39%)
Query: 105 NHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N L + P +FQ +L EL + + + + F G+ LR L+L+ N + S+ F
Sbjct: 179 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFV 238
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
+ LQ+LYLD N I ++ F+ + LR L L+HNR++ L +
Sbjct: 239 HLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAH 298
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I + P FKD+ L+ + + + + L L L L NQ
Sbjct: 299 NAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFS 358
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
GN + E+ F KL L L+ + L V F L+ L L +
Sbjct: 359 GLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRD 418
Query: 343 NKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGL 402
N + +E S + + L +L ++ N + ++ T + +
Sbjct: 419 NSISSIEEQSLAGL-SELLELDLTTNRL-THLPRQLFQGLGHLEYLLLSYNQLTTLSAEV 476
Query: 403 FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFD-----EKSYIMSEPK 457
+L++S N+L+ + L+ S +L +L L N + F E+ ++ + P
Sbjct: 477 LGPLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNSLQTFSPQPGLERLWLDANPW 536
Query: 458 NIHKAAK--NSFALQS 471
+ K FALQ+
Sbjct: 537 DCSCPLKALRDFALQN 552
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 58/253 (22%), Positives = 109/253 (43%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
Q+L LH+ + + + F PSL L+L+ N + L + F+G+ +L +L L +N
Sbjct: 121 QNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNS 180
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ +P +VF L +L L LA N+++ L P N + + +F +
Sbjct: 181 LVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHL 240
Query: 237 QEL-KTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGN 295
L K + R+ + + P + + L +LDL +N+ N
Sbjct: 241 PRLQKLYLDRNL-ITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHN 299
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDP 355
+ ++F L+ L L NR+ ++ F L L L ++ N++ + V +F
Sbjct: 300 AIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSG 359
Query: 356 IENSLRDLKISGN 368
+ N + + +SGN
Sbjct: 360 LFN-VAVMNLSGN 371
Score = 169 (64.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 60/256 (23%), Positives = 109/256 (42%)
Query: 1 MEFTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMC 60
ME T + L L L++N I + P FKD+ L + L L H+ +
Sbjct: 281 MEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLH---FLEE----LQLGHNRIR----QLG 329
Query: 61 ECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQH 118
E + G+ E++ + + +G G + + + N L P +FQ
Sbjct: 330 ERTFEGLGQLEVLTLNDNQITEVRVGAFS-G--LFNVAVMNLSGNCLRSLPERVFQGLDK 386
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L LH+ +S + + H F G+ LR L L N+I+S+ + + G+ L EL L N++
Sbjct: 387 LHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLT 446
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
+P +F L L L L++N+++ L+ +N + + +F +
Sbjct: 447 HLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGR 506
Query: 239 LKTFKCRSCGLENINP 254
L+ R+ L+ +P
Sbjct: 507 LRYLSLRNNSLQTFSP 522
Score = 127 (49.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 48/206 (23%), Positives = 83/206 (40%)
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND 224
++ + L+LD N + SIPS+ F +LS L L+L + + L P+ N
Sbjct: 73 VSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNR 132
Query: 225 IVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXX 284
+ + +F L + S L + ++ L+ L L+LG+N
Sbjct: 133 LRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGL 192
Query: 285 XXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
GN + F +L+ L L RN L V F +L L +L + N
Sbjct: 193 GNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNL 252
Query: 345 LDRLEVASFDPIENSLRDLKISGNNI 370
+ + +F ++ +LR L +S N +
Sbjct: 253 ITAVAPRAFLGMK-ALRWLDLSHNRV 277
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 214 (80.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 91/401 (22%), Positives = 162/401 (40%)
Query: 47 LLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNH 106
LL + + CP C+C + E+ C ++A +P+ D+ I+ E +
Sbjct: 13 LLLARPAQPCPMGCDCFVQ-----EVFCSDEELAT-VPL---DIPPYTKNIIFVETSFTT 63
Query: 107 LTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
L F +L ++ N+ + F G+P L L +T ++ +L F + +
Sbjct: 64 LETRA-FGSNPNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTS 122
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
L +L L+FN +E++P +F HL+ L L L N++ L R N +
Sbjct: 123 LGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLA 182
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
++ E+F + L+T K + L + ++ L L L L N
Sbjct: 183 QLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFC 242
Query: 287 XXXXXXXGN---HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N H P+ + F+S L L L+ N L + F + L+ L +++N
Sbjct: 243 LERLWLQRNAITHLPLSI---FASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHN 299
Query: 344 KLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLF 403
+L+ + +F + N LR L +S N I + N T + LF
Sbjct: 300 QLETVAEGTFAHLSN-LRSLMLSYNAI-THLPAGIFRDLEELVKLYLGSNNLTALHPALF 357
Query: 404 KMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
+ L+ L+LS N L + ++ +N L +L L N ++
Sbjct: 358 QNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQ 398
Score = 202 (76.2 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 77/319 (24%), Positives = 128/319 (40%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F LE+L +T S + + F + SL L L N + +L + F+ + L+ L+L
Sbjct: 93 FGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHL 152
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N+++++P +F L+ L+ L+LA N +++L N + + +
Sbjct: 153 QGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGV 212
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
F + L+ S + + P ++S L L L L N
Sbjct: 213 FGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSL 272
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N V+ F+ L L L N+L V F +L+NL L +SYN + L
Sbjct: 273 QWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGI 332
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
F +E ++ L + NN+ ++ T +P+G+F N +L L
Sbjct: 333 FRDLEELVK-LYLGSNNL-TALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNL 390
Query: 413 NLSGNNLQ-DIHNLLYQSN 430
L GN Q D H L Y N
Sbjct: 391 ALHGNPWQCDCH-LAYLFN 408
Score = 164 (62.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 66/312 (21%), Positives = 117/312 (37%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F P+L + + + F G+ L++L + + ++ +++F +L+ L L+L
Sbjct: 69 FGSNPNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTL 128
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
N + L N + + +F+ + LKT L + +
Sbjct: 129 NFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEEL 188
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L L L L N N+ + + FS F L+ L L
Sbjct: 189 FHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWL 248
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXX 376
+RN + + + F +L NL L + +N L L F L L ++ N ++
Sbjct: 249 QRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTP-CLVGLSLTHNQLETVAEG 307
Query: 377 XXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHL 436
++ T +P G+F+ L L L NNL +H L+Q+ KL L
Sbjct: 308 TFAHLSNLRSLM-LSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELL 366
Query: 437 DLSRNKFKGFDE 448
LS+N+ E
Sbjct: 367 SLSKNQLTTLPE 378
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 58/274 (21%), Positives = 109/274 (39%)
Query: 225 IVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXX 284
+ + P+ F + L+ + N++ ++S L L L L +N
Sbjct: 85 LCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHL 144
Query: 285 XXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
GN + + F L+ L L +N LA++ F LT+L L +S N
Sbjct: 145 AALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNA 204
Query: 345 LDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK 404
L L F + SL++L + NNI + T +P +F
Sbjct: 205 LSGLPQGVFGKL-GSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNA-ITHLPLSIFA 262
Query: 405 MNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI-MSEPKNIHKAA 463
+L FL+L N L+ + L+ L L L+ N+ + E ++ +S +++ +
Sbjct: 263 SLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSY 322
Query: 464 KNSFALQSSMGKNAEYAV--FIASSSISYLLEAL 495
L + + ++ E V ++ S++++ L AL
Sbjct: 323 NAITHLPAGIFRDLEELVKLYLGSNNLTALHPAL 356
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 149 (57.5 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 50/181 (27%), Positives = 84/181 (46%)
Query: 43 IFLYLLHSSASVMCPYMCECA---LDDRGRYEIVCRRGDMAN-PIPIGQMDL-GTEVLKI 97
+ L L +A CP C C+ +D G + RG N P ++DL G + +I
Sbjct: 11 LLLVLAGEAAPQPCPAQCSCSGSTVDCHG----LALRGVPRNIPRNTERLDLNGNNITRI 66
Query: 98 VPSE-ENPNHLTIGPI------------FQQFQHLEELHITNSFIPAIGFHPFWGVPSLR 144
++ HL + + FQ + LE L + + + + F G P L
Sbjct: 67 TKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTPKLY 126
Query: 145 YLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L+L+ N I ++ F+G ++++ L LD+N+I I F L DL VL+L +N I++L
Sbjct: 127 RLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRL 186
Query: 205 A 205
+
Sbjct: 187 S 187
Score = 142 (55.0 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 46/155 (29%), Positives = 78/155 (50%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A + CP C C G + C + N IP + T L++ +E + T G
Sbjct: 498 ADLACPEKCRC----EGT-TVDCSNQKL-NKIP-DHIPQYTAELRLNNNEFSVLEAT-G- 548
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF++ L +++++N+ I I F G + L LT N + ++ D FKG+ +L+ L
Sbjct: 549 IFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLM 608
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L N++ + + F LS +R+LSL N+I+ +AP
Sbjct: 609 LRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAP 643
Score = 138 (53.6 bits), Expect = 5.2e-11, Sum P(4) = 5.2e-11
Identities = 48/156 (30%), Positives = 74/156 (47%)
Query: 51 SASVM-CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S SV+ CP C C+ + IV RG IP + TE+ ++ E+N +
Sbjct: 263 SCSVLHCPAACTCSNN------IVDCRGKGLTEIPTNLPETITEI-RL---EQNSIKVIP 312
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F ++ L + ++N+ I F G+ SL L L N IT L F+G+ +LQ
Sbjct: 313 PGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQL 372
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L+ NKI + F L +L +LSL N++ +A
Sbjct: 373 LLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 408
Score = 135 (52.6 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 37/128 (28%), Positives = 57/128 (44%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ EL + N S + A G F +P LR +NL++N IT + + F G + EL L
Sbjct: 529 QYTAELRLNNNEFSVLEATGI--FKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLT 586
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E++ +F L L+ L L NR+S + N I + P F
Sbjct: 587 SNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSF 646
Query: 234 KDIQELKT 241
+ L T
Sbjct: 647 DTLHSLST 654
Score = 120 (47.3 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN F ++ K S+ L ++ L NR++ ++ +F+N+T L+ L +SYN+L + +F
Sbjct: 759 GNQFTLV-PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTF 817
Query: 354 DPIENSLRDLKISGNNI 370
D ++ SLR L + GN+I
Sbjct: 818 DGLK-SLRLLSLHGNDI 833
Score = 101 (40.6 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 34/126 (26%), Positives = 51/126 (40%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L NNIT + +F G+ +L+ L L NKI +I F L +L L L N + L+
Sbjct: 56 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLS 115
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I I + F+ ++K + + I + L DL
Sbjct: 116 ELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEV 175
Query: 266 LDLGYN 271
L L N
Sbjct: 176 LTLNNN 181
Score = 96 (38.9 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 30/147 (20%), Positives = 63/147 (42%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ E L + + I I F G+ LR L L N I+++ F+ + L+ L L+ N
Sbjct: 51 RNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNN 110
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ + +F+ L L L+ N+I + + YN I I F+ +
Sbjct: 111 LQLLSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 170
Query: 237 QELKTFKCRSCGLENINPMMYSILADL 263
++L+ + + ++ ++ + L
Sbjct: 171 RDLEVLTLNNNNITRLSVASFNHMPKL 197
Score = 95 (38.5 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 34/139 (24%), Positives = 57/139 (41%)
Query: 231 EIFKDIQELKT-FKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
EI ++ E T + ++ I P +S L +DL NQ
Sbjct: 289 EIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNS 348
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
GN + + F F LQ+L L N++ + AF +L NL L + NKL +
Sbjct: 349 LVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 408
Query: 350 VASFDPIENSLRDLKISGN 368
+F P+ +++ L ++ N
Sbjct: 409 KGTFSPLR-AIQTLHLAQN 426
Score = 87 (35.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 36/152 (23%), Positives = 62/152 (40%)
Query: 330 TNLTNLI-ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
TNL I E+ + N + + +F P + LR + +S N I
Sbjct: 292 TNLPETITEIRLEQNSIKVIPPGAFSPYKK-LRRIDLSNNQISEAAPDAFQGLRSLNSLV 350
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
+ T++PKGLF+ LQ L L+ N + + +Q L L L NK + +
Sbjct: 351 LYGN-KITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 409
Query: 449 KSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
++ + + +H A+N F + A+Y
Sbjct: 410 GTFSPLRAIQTLH-LAQNPFICDCHLKWLADY 440
Score = 81 (33.6 bits), Expect = 8.6e-12, Sum P(3) = 8.6e-12
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + +K F L+ L L+ NR++ V +FT L+++ L + N++ + SFD
Sbjct: 588 NRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFD 647
Query: 355 PIENSLRDLKISGN 368
+ +SL L + N
Sbjct: 648 TL-HSLSTLNLLAN 660
Score = 79 (32.9 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 24/105 (22%), Positives = 49/105 (46%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+ + ++ +F L LR ++L++N+I+ + N +
Sbjct: 533 ELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLET 592
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
+ ++FK ++ LKT RS + + ++ L+ + L L NQ
Sbjct: 593 VRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQ 637
Score = 79 (32.9 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 26/102 (25%), Positives = 43/102 (42%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+ IP F LR + L++N+IS+ AP N I
Sbjct: 298 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT 357
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
E+ +F+ + L+ + IN + DL L+L
Sbjct: 358 ELPKGLFEGLFSLQLLLLNA---NKINCLRVDAFQDLHNLNL 396
Score = 76 (31.8 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
+ EL +T++ + + F G+ SL+ L L N ++ + + +F G+ +++ L L N+I
Sbjct: 580 VNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQIT 639
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
++ F L L L+L N
Sbjct: 640 TVAPGSFDTLHSLSTLNLLAN 660
Score = 74 (31.1 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQ-----SNIKLT--HLDLSRNK-FKGFDEKSYI 452
G+FK P L+ +NLS N + DI + + + LT L+ R+K FKG + +
Sbjct: 548 GIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTL 607
Query: 453 MSEPKNIHKAAKNSFALQSSM 473
M + +SF SS+
Sbjct: 608 MLRSNRVSCVGNDSFTGLSSV 628
Score = 67 (28.6 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + +SFS+ +L L L NRL + F L +L L + N + + +F+
Sbjct: 783 NRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFN 842
Query: 355 PIENSLRDLKISGN 368
+ ++L L I N
Sbjct: 843 DL-SALSHLAIGAN 855
Score = 65 (27.9 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 25/121 (20%), Positives = 46/121 (38%)
Query: 150 HNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPR 207
+NN S+L+ FK + L+++ L NKI I F S + L L NR+ + +
Sbjct: 537 NNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDK 596
Query: 208 XXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLD 267
N + + + F + ++ + + P + L L L+
Sbjct: 597 MFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLN 656
Query: 268 L 268
L
Sbjct: 657 L 657
Score = 62 (26.9 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
+T +PK L HL ++LS N + + N + + +L L LS N+ + +++
Sbjct: 762 FTLVPKELSNYK-HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTF 817
Score = 60 (26.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 24/88 (27%), Positives = 35/88 (39%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
LGT L + EN F+ ++ L + + I I F + L L L
Sbjct: 120 LGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLN 179
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKI 177
+NNIT L +F M L+ L N +
Sbjct: 180 NNNITRLSVASFNHMPKLRTFRLHSNNL 207
Score = 58 (25.5 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N + + T F L L ++++S NK+ +E +FD + + +L ++ N ++
Sbjct: 534 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGA-SGVNELLLTSNRLE 591
Score = 56 (24.8 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 21/105 (20%), Positives = 42/105 (40%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
+D S KL+++ D I +L+++ N +++ TD
Sbjct: 513 VDCSNQKLNKIP----DHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITD 568
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
I +G F + L L+ N L+ + + +++ L L L N+
Sbjct: 569 IEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNR 613
Score = 55 (24.4 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 22/92 (23%), Positives = 32/92 (34%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I ++F L++
Sbjct: 766 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRL 825
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V AF +L+ L L I N L
Sbjct: 826 LSLHGNDISVVPEGAFNDLSALSHLAIGANPL 857
Score = 53 (23.7 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I E P+ F+ ++ L
Sbjct: 321 KLRRIDLSNNQISEAAPDAFQGLRSLNSL 349
Score = 45 (20.9 bits), Expect = 5.2e-11, Sum P(4) = 5.2e-11
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
+K+L L YN I I F+ ++D +L
Sbjct: 149 IKNLQLDYNQISCIEDGAFRALRDLEVL 176
Score = 45 (20.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 17/92 (18%), Positives = 32/92 (34%)
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
P+ + + L + + ++ +S + L+ L L YN+
Sbjct: 766 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRL 825
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
GN V+ E +F+ L L + N L
Sbjct: 826 LSLHGNDISVVPEGAFNDLSALSHLAIGANPL 857
Score = 44 (20.5 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L+L GN++ + + L+HL + N
Sbjct: 812 IPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 855
Score = 42 (19.8 bits), Expect = 1.0e-10, Sum P(4) = 1.0e-10
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 LIFMS--KLKSLDLSYNDIVEINPEIFKDIQD 34
L+F+ KL LDLS N I I + F+ D
Sbjct: 117 LLFLGTPKLYRLDLSENQIQAIPRKAFRGAVD 148
Score = 41 (19.5 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 23/121 (19%), Positives = 39/121 (32%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + P + L L L L N+
Sbjct: 306 NSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFE 365
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L + F+ L + L ++
Sbjct: 366 GLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLHLAQ 425
Query: 343 N 343
N
Sbjct: 426 N 426
>FB|FBgn0261269 [details] [associations]
symbol:conv "convoluted" species:7227 "Drosophila
melanogaster" [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
system" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008045
GeneTree:ENSGT00690000101816 GO:GO:0035159 InterPro:IPR026906
Pfam:PF13306 EMBL:EU814872 RefSeq:NP_610948.2 UniGene:Dm.23922
SMR:A1Z9N6 STRING:A1Z9N6 EnsemblMetazoa:FBtr0087540 GeneID:36588
KEGG:dme:Dmel_CG8561 UCSC:CG8561-RA CTD:36588 FlyBase:FBgn0261269
InParanoid:A1Z9N6 OMA:TIVCENT OrthoDB:EOG4ZGMT6 GenomeRNAi:36588
NextBio:799366 Uniprot:A1Z9N6
Length = 1092
Score = 217 (81.4 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 70/331 (21%), Positives = 136/331 (41%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
+ +TN + + F + L+ L+L N + +L FK + L+ L + N+I+ +
Sbjct: 179 IRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLE 238
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
+ L+ L +++HN +S+L+ +N I ++ F+ ++ L+
Sbjct: 239 AQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRR 298
Query: 242 FKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVIL 301
L +I + +A + +DL N+ N+ I
Sbjct: 299 LFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIE 358
Query: 302 EKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
+ SF ++ ++ + N L + T AF N N+ LD+S+N+L SFD E +
Sbjct: 359 KNSFKDIYQA-IINVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFD--ETTFA 415
Query: 362 D-LKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQ 420
++S NN+ + + T+IPK F L +++S NN+
Sbjct: 416 TYFQLSYNNLTNLAQIPIQNMTGLKVLNASYN-SITEIPKNCFPKLYELHTIDVSHNNIS 474
Query: 421 DIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
I N ++Q+ L +DLS N + ++
Sbjct: 475 SIFNGVFQTLFSLRSIDLSHNSMREIKSSTF 505
Score = 213 (80.0 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 77/373 (20%), Positives = 156/373 (41%)
Query: 93 EVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN 152
E+ I S N + + G +FQ L + ++++ + I F +P+L ++L+HN
Sbjct: 462 ELHTIDVSHNNISSIFNG-VFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNE 520
Query: 153 ITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXX 212
+ S++ + + +L++LYL+ N++E + F L L +HNR++ +
Sbjct: 521 LVSVVRGSLAKLTSLRQLYLNNNQLEKL----FQLPISLNELYFSHNRLTNIPSGTWPVM 576
Query: 213 XXXXXXXXXYNDIVE-INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
+N + + +N E F + ++ K ++ G+ ++++ L YL L N
Sbjct: 577 NSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENN 636
Query: 272 QXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTN 331
GN I +++F +L L L N + + F
Sbjct: 637 NITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVG 696
Query: 332 LTNLIELDISYNKLDRLEVASFDPIEN--SLRDLKISGNNIQXXXXXXXXXXXXXXXXXX 389
L +L LD+S+N L +L+ + +++ SL L +S N I
Sbjct: 697 LPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLR 756
Query: 390 IADMNYTDIPKGLFKMN---PHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
+++Y +P + + L L++S N + D+ + + L LD+S N+
Sbjct: 757 NLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNL 816
Query: 447 DEKSYIMSEPKNI 459
+ +I P+N+
Sbjct: 817 KSEEHIFDLPQNL 829
Score = 186 (70.5 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 78/376 (20%), Positives = 142/376 (37%)
Query: 76 RGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFH 135
RG + IG +DL LK + + +F Q ++E L + + I I +
Sbjct: 311 RGTFGSIARIGTIDLARNRLKKIEFQ----------MFTQMNYVELLDLAENNITKIEKN 360
Query: 136 PFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLS 195
F + +N++HN + + F+ +N+ L L N++ + F +
Sbjct: 361 SFKDIYQA-IINVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQ 419
Query: 196 LAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPM 255
L++N ++ LA YN I EI F + EL T + +I
Sbjct: 420 LSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNG 479
Query: 256 MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
++ L L +DL +N N ++ S + L+ L
Sbjct: 480 VFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLY 539
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L N+L K+ F +L EL S+N+L + ++ P+ NSL L +S N +
Sbjct: 540 LNNNQLEKL----FQLPISLNELYFSHNRLTNIPSGTW-PVMNSLIYLDLSHNQLGDTLN 594
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
+ + + PK + LQ+L+L NN+ + + L
Sbjct: 595 GESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFE 654
Query: 436 LDLSRNKFKGFDEKSY 451
L+L N+ K ++++
Sbjct: 655 LNLYGNQVKDISKRAF 670
Score = 183 (69.5 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 65/300 (21%), Positives = 116/300 (38%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
L+ L+L+HN I L +F+GM L+ L+L N + I F ++ + + LA NR+
Sbjct: 272 LKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLK 331
Query: 203 KLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILAD 262
K+ + N+I +I FKDI + LE I + +
Sbjct: 332 KIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQA-IINVSHNALELIETAAFENCVN 390
Query: 263 LIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLA 322
+ LDL +N+ N+ + + + L+VL N +
Sbjct: 391 ITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSIT 450
Query: 323 KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXX 382
++ F L L +D+S+N + + F + SLR + +S N+++
Sbjct: 451 EIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLF-SLRSIDLSHNSMREIKSSTFGTLP 509
Query: 383 XXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
++ + +G L+ L L+ N L+ L+Q I L L S N+
Sbjct: 510 TLLEMD-LSHNELVSVVRGSLAKLTSLRQLYLNNNQLEK----LFQLPISLNELYFSHNR 564
Score = 180 (68.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 75/332 (22%), Positives = 131/332 (39%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
FQ + L+ L + + + + + F + L L+++HN I L + + L +
Sbjct: 194 FQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNV 253
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N + + F S L+VL L+HN+I++L N + +I
Sbjct: 254 SHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGT 313
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
F I + T L+ I M++ + + LDL N
Sbjct: 314 FGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQAIINVS 373
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N +I +F + + VL L NRLA + +F T +SYN L L A
Sbjct: 374 H-NALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNL--AQ 430
Query: 353 FDPIEN--SLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQ 410
PI+N L+ L S N+I ++ N + I G+F+ L+
Sbjct: 431 I-PIQNMTGLKVLNASYNSI-TEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLR 488
Query: 411 FLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
++LS N++++I + + + L +DLS N+
Sbjct: 489 SIDLSHNSMREIKSSTFGTLPTLLEMDLSHNE 520
Score = 174 (66.3 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 96/426 (22%), Positives = 175/426 (41%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGR 69
+L ++D+S+N+I I +F+ + + + + SS P + E L
Sbjct: 462 ELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNEL 521
Query: 70 YEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFI 129
+V RG +A + Q+ L L+ + + P +++ ++ F H +TN I
Sbjct: 522 VSVV--RGSLAKLTSLRQLYLNNNQLEKL--FQLP--ISLNELY--FSHNR---LTN--I 568
Query: 130 PAIGFHPFWGVPSLRYLNLTHNNITSLLD-YNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
P+ G P SL YL+L+HN + L+ +F G++ +Q L L N I P +
Sbjct: 569 PS-GTWPVMN--SLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVM 625
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY-NDIVEINPEIFKDIQELKTFKCRSC 247
S L+ L L +N I+ L R Y N + +I+ F+ + +L T S
Sbjct: 626 STLQYLHLENNNITTLE-RSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSN 684
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG---NHFPVILEKS 304
G++ + ++ L L LDL +N N + +K+
Sbjct: 685 GIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKT 744
Query: 305 FSSQ----FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSL 360
F S + L+ L L N + +T L+ LD+S+N+++ L SL
Sbjct: 745 FPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNF-TSL 803
Query: 361 RDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDI---P-KGLFKMNPHLQFLNLSG 416
+ L +S N + D+++ I P L K+ L++++L+
Sbjct: 804 QSLDMSYNELSNLKSEEHIFDLPQNLSWL--DLSHNKIYHLPFANLVKVKS-LKYVDLTN 860
Query: 417 NNLQDI 422
N+L+D+
Sbjct: 861 NSLEDV 866
Score = 153 (58.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 60/269 (22%), Positives = 108/269 (40%)
Query: 105 NHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N LT IG F + + + + + I F F + + L+L NNIT + +FK
Sbjct: 304 NVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFK 363
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
+ + + N +E I ++ F + ++ VL L+HNR++ + R Y
Sbjct: 364 DIYQAI-INVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSY 422
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N++ + +++ LK + I + L +L +D+ +N
Sbjct: 423 NNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQ 482
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N I +F + L + L N L V + LT+L +L ++
Sbjct: 483 TLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNN 542
Query: 343 NKLDRLEVASFD-PIENSLRDLKISGNNI 370
N+L++L F PI SL +L S N +
Sbjct: 543 NQLEKL----FQLPI--SLNELYFSHNRL 565
Score = 152 (58.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 69/307 (22%), Positives = 110/307 (35%)
Query: 145 YLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
Y L++NN+T+L + M L+ L +N I IP + F L +L + ++HN IS +
Sbjct: 417 YFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSI 476
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
+N + EI F + L L ++ + L L
Sbjct: 477 FNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLR 536
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
L L NQ N I ++ L L L N+L
Sbjct: 537 QLYLNNNQLEKLFQLPISLNELYFSH----NRLTNIPSGTWPVMNSLIYLDLSHNQLGDT 592
Query: 325 TT-TAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXX 383
+FT L + L + N + + + + ++L+ L + NNI
Sbjct: 593 LNGESFTGLLVVQRLKLQNNGISQPPKDAV-AVMSTLQYLHLENNNITTLERSAFGKLPV 651
Query: 384 XXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443
+ DI K F+ L LNLS N +Q + N ++ L +LDLS N
Sbjct: 652 LFELNLYGNQ-VKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSL 710
Query: 444 KGFDEKS 450
D K+
Sbjct: 711 TKLDNKT 717
Score = 138 (53.6 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 58/260 (22%), Positives = 106/260 (40%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L+ LH+ N+ I + F +P L LNL N + + F+G++ L L L N I+
Sbjct: 628 LQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQ 687
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX---XYNDIVEINPEIFKD 235
++ + +F+ L LR L L+ N ++KL + +N I + + F
Sbjct: 688 TLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPS 747
Query: 236 IQELKTFKCRSCGLE-NINPMM-YSIL---ADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
Q + + R+ L N+ P++ Y I L+ LD+ +NQ
Sbjct: 748 HQYIP-YNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSL 806
Query: 291 XXXGNHFPVIL--EKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
N + E F L L L N++ + + +L +D++ N L+ +
Sbjct: 807 DMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDV 866
Query: 349 EVASFDPIENSLRDLKISGN 368
+ + N + L ++GN
Sbjct: 867 PASIVGSMRNGSQVL-LAGN 885
Score = 124 (48.7 bits), Expect = 0.00041, P = 0.00041
Identities = 63/327 (19%), Positives = 120/327 (36%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMM---NLQELYLDFN 175
LE+LH+ + + +G F + + L + + L F G +L + +
Sbjct: 125 LEQLHLLRTNLSHVGLLGFGILGKAKELVIDGHAFQQLPKDLFAGQEIANSLGIIRVTNG 184
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKD 235
+ +P F L L+ L L N++ L +N I ++ + D
Sbjct: 185 NLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIAD 244
Query: 236 IQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGN 295
+ +L L ++ ++ + L L L +NQ N
Sbjct: 245 LTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDN 304
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIEL-DISYNKLDRLEVASFD 354
I +F S ++ + L RNRL K+ FT + N +EL D++ N + ++E SF
Sbjct: 305 VLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQM-NYVELLDLAENNITKIEKNSFK 363
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
I ++ + +S N ++ ++ + + F + L
Sbjct: 364 DIYQAI--INVSHNALELIETAAFENCVNITVLD-LSHNRLANFSRRSFDETTFATYFQL 420
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRN 441
S NNL ++ + Q+ L L+ S N
Sbjct: 421 SYNNLTNLAQIPIQNMTGLKVLNASYN 447
Score = 49 (22.3 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+ KLK+LDL N + + FK++++ +L
Sbjct: 197 LRKLKTLDLHGNQLENLKRNQFKNLRELEVL 227
Score = 45 (20.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTMLF 39
S LK L LS+N I ++ F+ ++ LF
Sbjct: 270 SVLKVLHLSHNQIARLDANSFRGMRFLRRLF 300
Score = 39 (18.8 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDI 32
+ +L+ LD+S+N I ++ + D+
Sbjct: 221 LRELEVLDISHNQIKKLEAQHIADL 245
>TAIR|locus:2197563 [details] [associations]
symbol:AT1G33590 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006952 "defense
response" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] [GO:0005618 "cell wall" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009617 "response to bacterium"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] Pfam:PF00560 InterPro:IPR001611
EMBL:CP002684 GO:GO:0009507 GO:GO:0080167 GO:GO:0009505
InterPro:IPR013210 Pfam:PF08263 IPI:IPI00516781 RefSeq:NP_564426.1
UniGene:At.26728 ProteinModelPortal:F4HR88 SMR:F4HR88 PRIDE:F4HR88
EnsemblPlants:AT1G33590.1 GeneID:840253 KEGG:ath:AT1G33590
OMA:YLELGHN Uniprot:F4HR88
Length = 477
Score = 211 (79.3 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 76/338 (22%), Positives = 138/338 (40%)
Query: 108 TIGPIFQQFQHLEELHITNSFIPAIGFHPF-WGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
T+ P + +HL+ ++ T+ F F + +P+L+Y+ + +N ++ L N +
Sbjct: 92 TLSPSLAKLKHLDGIYFTDLKNITGSFPQFLFQLPNLKYVYIENNRLSGTLPANIGALSQ 151
Query: 167 LQELYLDFNKIES-IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
L+ L+ N+ IPSS+ +L+ L L L +N ++ P N +
Sbjct: 152 LEAFSLEGNRFTGPIPSSI-SNLTLLTQLKLGNNLLTGTIPLGVANLKLMSYLNLGGNRL 210
Query: 226 VEINPEIFKDIQELKTFKCRSCGLE-NINPMMYSILADLIYLDLGYNQXXXXXXXXXXXX 284
P+IFK + EL++ G N+ P + S+ L +L+LG+N+
Sbjct: 211 TGTIPDIFKSMPELRSLTLSRNGFSGNLPPSIASLAPILRFLELGHNKLSGTIPNFLSNF 270
Query: 285 XXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
N F ++ KSF++ K+ L L N L N+ + LD+SYN+
Sbjct: 271 KALDTLDLSKNRFSGVIPKSFANLTKIFNLDLSHNLLTDPFPVL--NVKGIESLDLSYNQ 328
Query: 345 LDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK 404
+ + + LK++ I+ +++ T P
Sbjct: 329 FHLNTIPKWVTSSPIIFSLKLAKCGIKMSLDDWKPAQTFYYDFIDLSENEITGSPARFLN 388
Query: 405 MNPHLQFLNLSGNNLQ-DIHNLLYQSNIKLTHLDLSRN 441
+L +GN L+ D+ L + LT LD+SRN
Sbjct: 389 QTEYLVEFKAAGNKLRFDMGKLTFAKT--LTTLDISRN 424
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 142 (55.0 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 46/155 (29%), Positives = 78/155 (50%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A + CP C C G + C + N IP + T L++ +E + T G
Sbjct: 398 ADLACPEKCRC----EGT-TVDCSNQKL-NKIP-DHIPQYTAELRLNNNEFSVLEAT-G- 448
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF++ L +++++N+ I I F G + L LT N + ++ D FKG+ +L+ L
Sbjct: 449 IFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLM 508
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L N++ + + F LS +R+LSL N+I+ +AP
Sbjct: 509 LRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAP 543
Score = 138 (53.6 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 48/156 (30%), Positives = 74/156 (47%)
Query: 51 SASVM-CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S SV+ CP C C+ + IV RG IP + TE+ ++ E+N +
Sbjct: 160 SCSVLHCPAACTCSNN------IVDCRGKGLTEIPTNLPETITEI-RL---EQNSIKVIP 209
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F ++ L + ++N+ I F G+ SL L L N IT L F+G+ +LQ
Sbjct: 210 PGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQL 269
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L+ NKI + F L +L +LSL N++ +A
Sbjct: 270 LLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 305
Score = 135 (52.6 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 37/128 (28%), Positives = 57/128 (44%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ EL + N S + A G F +P LR +NL++N IT + + F G + EL L
Sbjct: 429 QYTAELRLNNNEFSVLEATGI--FKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLT 486
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E++ +F L L+ L L NR+S + N I + P F
Sbjct: 487 SNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSF 546
Query: 234 KDIQELKT 241
+ L T
Sbjct: 547 DTLHSLST 554
Score = 120 (47.3 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN F ++ K S+ L ++ L NR++ ++ +F+N+T L+ L +SYN+L + +F
Sbjct: 659 GNQFTLV-PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTF 717
Query: 354 DPIENSLRDLKISGNNI 370
D ++ SLR L + GN+I
Sbjct: 718 DGLK-SLRLLSLHGNDI 733
Score = 119 (46.9 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 125 TNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSV 184
++ F+P +G W ++ +L+ N I ++ F+G ++++ L LD+N+I I
Sbjct: 6 SSHFLPPVGV---WNELKIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA 62
Query: 185 FMHLSDLRVLSLAHNRISKLA 205
F L DL VL+L +N I++L+
Sbjct: 63 FRALRDLEVLTLNNNNITRLS 83
Score = 91 (37.1 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 32/127 (25%), Positives = 50/127 (39%)
Query: 231 EIFKDIQELKT-FKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
EI ++ E T + ++ I P +S L +DL NQ
Sbjct: 186 EIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNS 245
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
GN + + F F LQ+L L N++ + AF +L NL L + NKL +
Sbjct: 246 LVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 305
Query: 350 VASFDPI 356
+F P+
Sbjct: 306 KGTFSPL 312
Score = 86 (35.3 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 124 ITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSS 183
++ + I AI F G ++ L L +N I+ + D F+ + +L+ L L+ N I + +
Sbjct: 26 LSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVA 85
Query: 184 VFMHLSDLRVLSLAHNRI 201
F H+ LR L N +
Sbjct: 86 SFNHMPKLRTFRLHSNNL 103
Score = 82 (33.9 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 30/116 (25%), Positives = 47/116 (40%)
Query: 330 TNLTNLI-ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
TNL I E+ + N + + +F P + LR + +S N I
Sbjct: 189 TNLPETITEIRLEQNSIKVIPPGAFSPYKK-LRRIDLSNNQISEAAPDAFQGLRSLNSLV 247
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
+ T++PKGLF+ LQ L L+ N + + +Q L L L NK +
Sbjct: 248 LYGN-KITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 302
Score = 81 (33.6 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + +K F L+ L L+ NR++ V +FT L+++ L + N++ + SFD
Sbjct: 488 NRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFD 547
Query: 355 PIENSLRDLKISGN 368
+ +SL L + N
Sbjct: 548 TL-HSLSTLNLLAN 560
Score = 80 (33.2 bits), Expect = 5.9e-05, Sum P(4) = 5.9e-05
Identities = 42/172 (24%), Positives = 71/172 (41%)
Query: 109 IGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNL----THNNITSLLDYNFKGM 164
+GP + ++ E+ F+ + G F PS L+ T +N +++D KG+
Sbjct: 129 MGPAHLRGHNVAEVQ-KREFVCSAGHQSFMA-PSCSVLHCPAACTCSN--NIVDCRGKGL 184
Query: 165 M----NLQE----LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXX 216
NL E + L+ N I+ IP F LR + L++N+IS+ AP
Sbjct: 185 TEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLN 244
Query: 217 XXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
N I E+ +F+ + L+ + IN + DL L+L
Sbjct: 245 SLVLYGNKITELPKGLFEGLFSLQLLLLNA---NKINCLRVDAFQDLHNLNL 293
Score = 79 (32.9 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 24/105 (22%), Positives = 49/105 (46%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+ + ++ +F L LR ++L++N+I+ + N +
Sbjct: 433 ELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLET 492
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
+ ++FK ++ LKT RS + + ++ L+ + L L NQ
Sbjct: 493 VRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQ 537
Score = 76 (31.8 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
+ EL +T++ + + F G+ SL+ L L N ++ + + +F G+ +++ L L N+I
Sbjct: 480 VNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQIT 539
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
++ F L L L+L N
Sbjct: 540 TVAPGSFDTLHSLSTLNLLAN 560
Score = 75 (31.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L N+I++IP F D++ L L +N+IS + N+I ++
Sbjct: 26 LSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVA 85
Query: 232 IFKDIQELKTFKCRSCGL 249
F + +L+TF+ S L
Sbjct: 86 SFNHMPKLRTFRLHSNNL 103
Score = 74 (31.1 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQ-----SNIKLT--HLDLSRNK-FKGFDEKSYI 452
G+FK P L+ +NLS N + DI + + + LT L+ R+K FKG + +
Sbjct: 448 GIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTL 507
Query: 453 MSEPKNIHKAAKNSFALQSSM 473
M + +SF SS+
Sbjct: 508 MLRSNRVSCVGNDSFTGLSSV 528
Score = 67 (28.6 bits), Expect = 8.3e-09, Sum P(3) = 8.3e-09
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + +SFS+ +L L L NRL + F L +L L + N + + +F+
Sbjct: 683 NRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFN 742
Query: 355 PIENSLRDLKISGN 368
+ ++L L I N
Sbjct: 743 DL-SALSHLAIGAN 755
Score = 65 (27.9 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 25/121 (20%), Positives = 46/121 (38%)
Query: 150 HNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPR 207
+NN S+L+ FK + L+++ L NKI I F S + L L NR+ + +
Sbjct: 437 NNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDK 496
Query: 208 XXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLD 267
N + + + F + ++ + + P + L L L+
Sbjct: 497 MFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLN 556
Query: 268 L 268
L
Sbjct: 557 L 557
Score = 62 (26.9 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
+T +PK L HL ++LS N + + N + + +L L LS N+ + +++
Sbjct: 662 FTLVPKELSNYK-HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTF 717
Score = 61 (26.5 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 95 LKIVPSEENPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN 152
LKI S+ + N + P F+ ++ L + + I I F + L L L +NN
Sbjct: 19 LKIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNN 78
Query: 153 ITSLLDYNFKGMMNLQELYLDFNKI 177
IT L +F M L+ L N +
Sbjct: 79 ITRLSVASFNHMPKLRTFRLHSNNL 103
Score = 59 (25.8 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
+F L L L N++ ++ F L +L L ++ NK++ L V +F + N L L
Sbjct: 236 AFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHN-LNLL 294
Query: 364 KISGNNIQ 371
+ N +Q
Sbjct: 295 SLYDNKLQ 302
Score = 58 (25.5 bits), Expect = 7.2e-09, Sum P(4) = 7.2e-09
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N + + T F L L ++++S NK+ +E +FD + + +L ++ N ++
Sbjct: 434 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGA-SGVNELLLTSNRLE 491
Score = 56 (24.8 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 21/105 (20%), Positives = 42/105 (40%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
+D S KL+++ D I +L+++ N +++ TD
Sbjct: 413 VDCSNQKLNKIP----DHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITD 468
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
I +G F + L L+ N L+ + + +++ L L L N+
Sbjct: 469 IEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNR 513
Score = 56 (24.8 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
L++N + + AF+ L +D+S N++ +F + SL L + GN I
Sbjct: 200 LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLR-SLNSLVLYGNKI 253
Score = 55 (24.4 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 22/92 (23%), Positives = 32/92 (34%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I ++F L++
Sbjct: 666 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRL 725
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V AF +L+ L L I N L
Sbjct: 726 LSLHGNDISVVPEGAFNDLSALSHLAIGANPL 757
Score = 53 (23.7 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I E P+ F+ ++ L
Sbjct: 218 KLRRIDLSNNQISEAAPDAFQGLRSLNSL 246
Score = 45 (20.9 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
+K+L L YN I I F+ ++D +L
Sbjct: 45 IKNLQLDYNQISCIEDGAFRALRDLEVL 72
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 17/92 (18%), Positives = 32/92 (34%)
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
P+ + + L + + ++ +S + L+ L L YN+
Sbjct: 666 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRL 725
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
GN V+ E +F+ L L + N L
Sbjct: 726 LSLHGNDISVVPEGAFNDLSALSHLAIGANPL 757
Score = 44 (20.5 bits), Expect = 2.3e-09, Sum P(4) = 2.3e-09
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L+L GN++ + + L+HL + N
Sbjct: 712 IPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 755
Score = 37 (18.1 bits), Expect = 2.4e-10, Sum P(4) = 2.4e-10
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQD 34
K+K DLS N I I + F+ D
Sbjct: 20 KIKISDLSENQIQAIPRKAFRGAVD 44
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 147 (56.8 bits), Expect = 6.1e-14, Sum P(3) = 6.1e-14
Identities = 46/163 (28%), Positives = 86/163 (52%)
Query: 46 YLLHS--SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEEN 103
Y L+S ++ V+CP+ C C + C + IP ++ T L++ +E +
Sbjct: 363 YQLNSECNSDVVCPHKCRCEAS-----MVECSSLKLTK-IP-ERVPQATAELRLNNNEIS 415
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
T G +F++ HL++++++N+ + I F G S+ L+LT N + S+ F+G
Sbjct: 416 ILEAT-G-MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRG 473
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ L+ L L N+I I + F L ++R+LSL N+I+ ++P
Sbjct: 474 LEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISP 516
Score = 145 (56.1 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 54/155 (34%), Positives = 73/155 (47%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
+S CP MC C+ G IV RG IP + TE+ ++ E N +I P
Sbjct: 140 SSGSCPAMCACS---NG---IVDCRGKGLTAIPANLPEAMTEI-RL---ELN-GIKSIPP 188
Query: 112 -IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
F ++ L + ++N+ I I F G+ SL L L N IT L F G+ LQ L
Sbjct: 189 GAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPQGVFGGLFTLQLL 248
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+ NKI I F L +L +LSL N+I LA
Sbjct: 249 LLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLA 283
Score = 143 (55.4 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q EL + N S + A G F + L+ +NL++N ++ + D F+G ++ EL+L
Sbjct: 402 QATAELRLNNNEISILEATGM--FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT 459
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++ESI S +F L LR L L +NRIS + N I I+P F
Sbjct: 460 ANQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAF 519
Query: 234 KDIQELKT 241
+Q L T
Sbjct: 520 DTLQALST 527
Score = 107 (42.7 bits), Expect = 6.1e-14, Sum P(3) = 6.1e-14
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 294 GNHFPVILEKSFSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN F ++ + S FK LQ++ L N+++ ++ ++FTN++ L L +SYN L + +
Sbjct: 632 GNQFTLVPAQL--STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLA 689
Query: 353 FDPIENSLRDLKISGNNI 370
F + SLR L + GN+I
Sbjct: 690 FQGLR-SLRLLSLHGNDI 706
Score = 103 (41.3 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 92 TEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN 151
T + KI S + + G F+ + ELH+T + + +I F G+ LR L L +N
Sbjct: 427 THLKKINLSNNKVSEIEDGA-FEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNN 485
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
I+ + + +F G+ N++ L L N+I +I F L L L+L N
Sbjct: 486 RISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 533
Score = 96 (38.9 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 30/121 (24%), Positives = 51/121 (42%)
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
G+++I P +S L +DL NQ GN + + F
Sbjct: 182 GIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPQGVFGG 241
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG 367
F LQ+L L N++ + AF +L NL L + NK+ L +F + +++ L ++
Sbjct: 242 LFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR-AIQTLHLAQ 300
Query: 368 N 368
N
Sbjct: 301 N 301
Score = 94 (38.1 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 124 ITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSS 183
++ + I AI F G L+ L L N I + + F+ + L+ L L+ N I +IP S
Sbjct: 2 LSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVS 61
Query: 184 VFMHLSDLRVLSLAHNRI 201
F H+ LR L N +
Sbjct: 62 SFNHMPKLRTFRLHSNHL 79
Score = 81 (33.6 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 147 NLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
+L+ N I ++ F+G +L+ L LD N+I I F L L VL+L +N I+ +
Sbjct: 1 DLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTI 58
Score = 81 (33.6 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+SIP F LR + L++N+IS++AP N I
Sbjct: 173 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKIT 232
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F + L+ + + I + L +L L L N+
Sbjct: 233 DLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNK 278
Score = 77 (32.2 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 23/105 (21%), Positives = 52/105 (49%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+I + ++ +F L+ L+ ++L++N++S++ N +
Sbjct: 406 ELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 465
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
I +F+ ++ L+T R+ + I+ ++ L ++ L L NQ
Sbjct: 466 IRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQ 510
Score = 73 (30.8 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 24/113 (21%), Positives = 44/113 (38%)
Query: 256 MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
M+ L L ++L N+ N I F L+ L
Sbjct: 422 MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLM 481
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+ NR++ + +FT L N+ L + N++ + +FD ++ +L L + N
Sbjct: 482 LRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQ-ALSTLNLLAN 533
Score = 69 (29.3 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 20/75 (26%), Positives = 31/75 (41%)
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L N I++IP F +DL+ L L N+I + N+I I
Sbjct: 2 LSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVS 61
Query: 232 IFKDIQELKTFKCRS 246
F + +L+TF+ S
Sbjct: 62 SFNHMPKLRTFRLHS 76
Score = 68 (29.0 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
G+FK HL+ +NLS N + +I + ++ ++ L L+ N+ +
Sbjct: 421 GMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLE 464
Score = 68 (29.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 27/125 (21%), Positives = 51/125 (40%)
Query: 146 LNLTHNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
L L +N I S+L+ FK + +L+++ L NK+ I F + + L L N++
Sbjct: 407 LRLNNNEI-SILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 465
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
+ N I I+ + F ++ ++ + I+P + L L
Sbjct: 466 IRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQAL 525
Query: 264 IYLDL 268
L+L
Sbjct: 526 STLNL 530
Score = 65 (27.9 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T F LT+L ++++S NK+ +E +F+ S+ +L ++ N ++
Sbjct: 407 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAA-SVSELHLTANQLE 464
Score = 63 (27.2 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF++ +L L L N L + AF L +L L + N + L+ F
Sbjct: 656 NKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFA 715
Query: 355 PIENSLRDLKISGN 368
+ SL L I N
Sbjct: 716 DV-TSLSHLAIGAN 728
Score = 58 (25.5 bits), Expect = 6.1e-14, Sum P(3) = 6.1e-14
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I EI P+ F+ ++ L
Sbjct: 196 KLRRIDLSNNQISEIAPDAFQGLRSLNSL 224
Score = 58 (25.5 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 24/112 (21%), Positives = 40/112 (35%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+FK + LK + + I + A + L L NQ
Sbjct: 422 MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLM 481
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N I SF+ +++L L N++A ++ AF L L L++ N
Sbjct: 482 LRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 533
Score = 56 (24.8 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
+T +P L +LQ ++LS N + + N + + +LT L LS N +
Sbjct: 635 FTLVPAQLSTFK-YLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQ 683
Score = 56 (24.8 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 22/102 (21%), Positives = 38/102 (37%)
Query: 337 ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT 396
EL ++ N++ LE L+ + +S N + A+
Sbjct: 406 ELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ-LE 464
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS--NIKLTHL 436
I G+F+ L+ L L N + IHN + N++L L
Sbjct: 465 SIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 506
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ L+ L + + I I F + L L L +NNIT++ +F M L+ L
Sbjct: 15 FRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 74
Query: 173 DFNKI 177
N +
Sbjct: 75 HSNHL 79
Score = 50 (22.7 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F+ L+ L+L GN++ + ++ L+HL + N
Sbjct: 685 IPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGAN 728
Score = 50 (22.7 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 20/92 (21%), Positives = 31/92 (33%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I +F L++
Sbjct: 639 PAQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSLRL 698
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ + F ++T+L L I N L
Sbjct: 699 LSLHGNDISTLQEGIFADVTSLSHLAIGANPL 730
Score = 37 (18.1 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ N I I + F+D+Q+ ++L
Sbjct: 245 LQLLLLNANKINCIRLDAFQDLQNLSLL 272
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 210 (79.0 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 77/337 (22%), Positives = 135/337 (40%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+FQ HL +L++ + + + F G+ +L L L N +T L F G+ L+EL
Sbjct: 165 LFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELD 224
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L N + S+ ++VF+HL L+ L L N I+ +AP +N + + +
Sbjct: 225 LSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMED 284
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F + L + + ++ P + L L L LG+N+
Sbjct: 285 TFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLT 344
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N + +FS F + V+ L N L + F L L L + ++ L + +
Sbjct: 345 LNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLH 404
Query: 352 SFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQF 411
+F + + LR L + N+I + T +P+ LF+ HL++
Sbjct: 405 TFAGL-SGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTN-RLTHLPRQLFQGLGHLEY 462
Query: 412 LNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
L LS N L + + + LD+S N + E
Sbjct: 463 LLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAE 499
Score = 206 (77.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 85/376 (22%), Positives = 149/376 (39%)
Query: 105 NHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N L + P +FQ +L EL + + + + F G+ LR L+L+ N + S+ F
Sbjct: 180 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFV 239
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
+ LQ+LYLD N I ++ F+ + LR L L+HNR++ L +
Sbjct: 240 HLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAH 299
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I + P FKD+ L+ + + + + L L L L NQ
Sbjct: 300 NAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFS 359
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
GN + E+ F KL L L+ + L V F L+ L L +
Sbjct: 360 GLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRD 419
Query: 343 NKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGL 402
N + +E S + + L +L ++ N + ++ T + +
Sbjct: 420 NSISSIEEQSLAGL-SELLELDLTTNRL-THLPRQLFQGLGHLEYLLLSYNQLTTLSAEV 477
Query: 403 FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFD-----EKSYIMSEPK 457
+L++S N+L+ + L+ S ++ +L L N + F E+ ++ + P
Sbjct: 478 LGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSLQTFSPQPGLERLWLDANPW 537
Query: 458 NIHKAAK--NSFALQS 471
+ K FALQ+
Sbjct: 538 DCSCPLKALRDFALQN 553
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 82/398 (20%), Positives = 149/398 (37%)
Query: 56 CPYMCECALDD-RGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--I 112
CP C C+ DD + C ++ + +P + + T L + + N+L+ P
Sbjct: 41 CPVACTCSHDDYTDELSVFCSSKNLTH-LP-DDIPVSTRALWL-----DGNNLSSIPSAA 93
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
FQ L+ L++ S++ ++ G+ +L YL+L N + +L F +L L L
Sbjct: 94 FQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSL 153
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N + + +F LS L L+L N + L N + + P +
Sbjct: 154 SSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPAL 213
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
F + EL+ L ++ ++ L L L L N
Sbjct: 214 FCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDL 273
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N ++E +F L VL L N +A + F +L L EL + +N++ +L +
Sbjct: 274 SHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERT 333
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
F+ + L L ++ N I ++ +P+ +F+ L L
Sbjct: 334 FEGL-GQLEVLTLNDNQI-TEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSL 391
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKS 450
+L + L + + L L L N +E+S
Sbjct: 392 HLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQS 429
Score = 166 (63.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 59/256 (23%), Positives = 109/256 (42%)
Query: 1 MEFTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMC 60
ME T + L L L++N I + P FKD+ L + L L H+ +
Sbjct: 282 MEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLH---FLEE----LQLGHNRIR----QLG 330
Query: 61 ECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQH 118
E + G+ E++ + + +G G + + + N L P +FQ
Sbjct: 331 ERTFEGLGQLEVLTLNDNQITEVRVGAFS-G--LFNVAVMNLSGNCLRSLPERVFQGLDK 387
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L LH+ +S + + H F G+ LR L L N+I+S+ + + G+ L EL L N++
Sbjct: 388 LHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLT 447
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
+P +F L L L L++N+++ L+ +N + + +F +
Sbjct: 448 HLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGR 507
Query: 239 LKTFKCRSCGLENINP 254
++ R+ L+ +P
Sbjct: 508 VRYLSLRNNSLQTFSP 523
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 210 (79.0 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 80/330 (24%), Positives = 140/330 (42%)
Query: 41 VTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPS 100
VT +L LL + C +C+ GR +I CR +++ IP + T L + +
Sbjct: 17 VTCYLLLLLHKEILGCSSVCQLCT---GR-QINCRNLGLSS-IPKNFPE-STVFLYLTGN 70
Query: 101 EENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N +++ + L L++ NS I + F + L +L L +N I L
Sbjct: 71 --NISYINESEL-TGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGI 127
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
FKG++NL+ LYL +N++ +P VF L ++ L+L NR++ L
Sbjct: 128 FKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDL 187
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXX 280
N+I+ I+ F+ ++ L S L + + +L L L L +N
Sbjct: 188 SNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFA 247
Query: 281 XXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340
+ + FS L+ L L N L + + F+ L NLI L +
Sbjct: 248 FKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLKL 307
Query: 341 SYNKLDRLEVASFDPIENSLRDLKISGNNI 370
N++ ++ +F+ + SL+ L +S NN+
Sbjct: 308 DRNRIISIDNDTFENMGASLKILNLSFNNL 337
Score = 167 (63.8 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 69/302 (22%), Positives = 115/302 (38%)
Query: 145 YLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
+L LT NNI+ + + G+ +L LYLD + I + F+ L L L L +N I +L
Sbjct: 64 FLYLTGNNISYINESELTGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRL 123
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
P YN + + +F D+ ++ + L + + + L
Sbjct: 124 DPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALR 183
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
LDL N N+ + +F L+ L L N + +
Sbjct: 184 ILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAI 243
Query: 325 TTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXX 384
AF L NL L + +++ + F I N+L+ L +S N+++
Sbjct: 244 QPFAFKGLANLEYLLLKNSRIRNVTRDGFSGI-NNLKHLILSHNDLENLNSDTFSLLKNL 302
Query: 385 XXXXXIADMN-YTDIPKGLFK-MNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
D N I F+ M L+ LNLS NNL +H + + L HL + N
Sbjct: 303 IYLKL--DRNRIISIDNDTFENMGASLKILNLSFNNLTALHPRVLKPLSSLIHLQANSNP 360
Query: 443 FK 444
++
Sbjct: 361 WE 362
Score = 158 (60.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 48/184 (26%), Positives = 89/184 (48%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNL 148
+G L+I+ N N L I FQ ++L L++ ++ + + + F + SLR L+L
Sbjct: 177 VGMVALRILDLSNN-NILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSL 235
Query: 149 THNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRX 208
+HN I ++ + FKG+ NL+ L L ++I ++ F +++L+ L L+HN + L
Sbjct: 236 SHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDT 295
Query: 209 XXXXXXXXXXXXXYNDIVEINPEIFKDI-QELKTFKCRSCGLENINPMMYSILADLIYLD 267
N I+ I+ + F+++ LK L ++P + L+ LI+L
Sbjct: 296 FSLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNLTALHPRVLKPLSSLIHLQ 355
Query: 268 LGYN 271
N
Sbjct: 356 ANSN 359
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 52/258 (20%), Positives = 105/258 (40%)
Query: 194 LSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENIN 253
L L N IS + ++I+ + P+ F ++ L + ++ ++
Sbjct: 65 LYLTGNNISYINESELTGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLD 124
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P ++ L +L L L YNQ N V+ +F L++
Sbjct: 125 PGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRI 184
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXX 373
L L N + +++ + F +L NL L + N L ++ +F+ ++ SLR L +S N I+
Sbjct: 185 LDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLK-SLRRLSLSHNPIEAI 243
Query: 374 XXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKL 433
+ + ++ + F +L+ L LS N+L+++++ + L
Sbjct: 244 QPFAFKGLANLEYLL-LKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNL 302
Query: 434 THLDLSRNKFKGFDEKSY 451
+L L RN+ D ++
Sbjct: 303 IYLKLDRNRIISIDNDTF 320
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 146 (56.5 bits), Expect = 7.6e-14, Sum P(3) = 7.6e-14
Identities = 53/184 (28%), Positives = 84/184 (45%)
Query: 36 TMLFQVTIFLYLLHSSASVMCPYMCECA---LDDRG-RYEIVCR-------RGDM-ANPI 83
T+ + + L +L+ A CP C C+ +D G IV R R D+ N I
Sbjct: 8 TLSLSLALVLSILNKVAPHACPAQCSCSGSTVDCHGLALRIVPRNIPRNTERLDLNGNNI 67
Query: 84 P-IGQMDL-GTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVP 141
I + D G L+I+ EN F + LE L + + + F G
Sbjct: 68 TRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTA 127
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
L L+L+ N I ++ F+G ++++ L LD+N+I I F L DL VL+L +N I
Sbjct: 128 KLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNI 187
Query: 202 SKLA 205
++L+
Sbjct: 188 TRLS 191
Score = 145 (56.1 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 49/156 (31%), Positives = 75/156 (48%)
Query: 51 SASVM-CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S SV+ CP C C+ + IV RG IP + TE+ ++ E+N +
Sbjct: 271 SCSVLHCPIACTCSNN------IVDCRGKGLTEIPTNLPETITEI-RL---EQNSIRVIP 320
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F ++ L L ++N+ I + F G+ SL L L N IT L F+G+ +LQ
Sbjct: 321 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQL 380
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L+ NKI + F L +L +LSL N++ +A
Sbjct: 381 LLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVA 416
Score = 132 (51.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 117 QHLEELHITNS---FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ EL + N+ + A G F +P LR +NL++N IT + + F+G + E+ L
Sbjct: 529 QYTAELRLNNNEFTVLEATGI--FKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLT 586
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E++ +F L L+ L L NRIS + N I + P F
Sbjct: 587 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAF 646
Query: 234 KDIQELKT 241
+ L T
Sbjct: 647 GTLHSLST 654
Score = 130 (50.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 44/155 (28%), Positives = 75/155 (48%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A + CP C C G + C + N IP + T L++ +E T G
Sbjct: 498 ADLACPEKCRC----EGT-TVDCSNQKL-NKIP-DHIPQYTAELRLNNNEFTVLEAT-G- 548
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF++ L +++++N+ I I F G + + LT N + ++ FKG+ +L+ L
Sbjct: 549 IFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 608
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L N+I + + F L +R+LSL N+I+ +AP
Sbjct: 609 LRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAP 643
Score = 102 (41.0 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 31/147 (21%), Positives = 63/147 (42%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ E L + + I I F G+ LR L L N I+++ F + L+ L L+ N
Sbjct: 55 RNTERLDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNN 114
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ P +F+ + L L L+ N+I + + YN I I F+ +
Sbjct: 115 LQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 237 QELKTFKCRSCGLENINPMMYSILADL 263
++L+ + + ++ ++ + L
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKL 201
Score = 94 (38.1 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 33/126 (26%), Positives = 49/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L NNIT + +F G+ +L+ L L NKI +I F L +L L L N +
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFP 119
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I I + F+ ++K + + I + L DL
Sbjct: 120 ELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEV 179
Query: 266 LDLGYN 271
L L N
Sbjct: 180 LTLNNN 185
Score = 87 (35.7 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 28/102 (27%), Positives = 43/102 (42%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I IP F LR L L++N+IS+LAP N I
Sbjct: 306 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 365
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
E+ +F+ + L+ + IN + DL L+L
Sbjct: 366 ELPKSLFEGLFSLQLLLLNA---NKINCLRVDAFQDLHNLNL 404
Score = 86 (35.3 bits), Expect = 7.6e-14, Sum P(3) = 7.6e-14
Identities = 29/117 (24%), Positives = 47/117 (40%)
Query: 252 INPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKL 311
I P +S L LDL NQ GN + + F F L
Sbjct: 319 IPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSL 378
Query: 312 QVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
Q+L L N++ + AF +L NL L + NKL + +F + +++ + ++ N
Sbjct: 379 QLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALR-AIQTMHLAQN 434
Score = 80 (33.2 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 36/152 (23%), Positives = 61/152 (40%)
Query: 330 TNLTNLI-ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
TNL I E+ + N + + +F P + LR L +S N I
Sbjct: 300 TNLPETITEIRLEQNSIRVIPPGAFSPYKK-LRRLDLSNNQISELAPDAFQGLRSLNSLV 358
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
+ T++PK LF+ LQ L L+ N + + +Q L L L NK + +
Sbjct: 359 LYGN-KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAK 417
Query: 449 KSY-IMSEPKNIHKAAKNSFALQSSMGKNAEY 479
++ + + +H A+N F + A+Y
Sbjct: 418 GTFSALRAIQTMH-LAQNPFICDCHLKWLADY 448
Score = 77 (32.2 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N VI +FS KL+ L L N+++++ AF L +L L + NK+ L + F+
Sbjct: 314 NSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFE 373
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ SL+ L ++ N I + D + KG F +Q ++L
Sbjct: 374 GLF-SLQLLLLNANKINCLRVDAFQDLHNLNLLS-LYDNKLQTVAKGTFSALRAIQTMHL 431
Query: 415 SGNN-LQDIH 423
+ N + D H
Sbjct: 432 AQNPFICDCH 441
Score = 73 (30.8 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 30/125 (24%), Positives = 51/125 (40%)
Query: 295 NHFPVILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N F V LE + F +L+ + L N++ + AF + + E+ ++ N+L+ ++
Sbjct: 539 NEFTV-LEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKM 597
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
F +E SL+ L + N I + D T + G F L L
Sbjct: 598 FKGLE-SLKTLMLRSNRISCVGNDSFTGLGSVRLLS-LYDNQITTVAPGAFGTLHSLSTL 655
Query: 413 NLSGN 417
NL N
Sbjct: 656 NLLAN 660
Score = 70 (29.7 bits), Expect = 7.6e-14, Sum P(3) = 7.6e-14
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQ-----SNIKLT--HLDLSRNK-FKGFDEKSYI 452
G+FK P L+ +NLS N + DI ++ + I LT L+ ++K FKG + +
Sbjct: 548 GIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 607
Query: 453 MSEPKNIHKAAKNSF 467
M I +SF
Sbjct: 608 MLRSNRISCVGNDSF 622
Score = 64 (27.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/128 (21%), Positives = 51/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N + + AF+ L LD+S N++ L +F + SL L + GN I
Sbjct: 311 LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLR-SLNSLVLYGNKITELPK 369
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + F+ +L L+L N LQ + + + +
Sbjct: 370 SLFEGLFSLQLLLLNAN-KINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQT 428
Query: 436 LDLSRNKF 443
+ L++N F
Sbjct: 429 MHLAQNPF 436
Score = 60 (26.2 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 24/88 (27%), Positives = 35/88 (39%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
LGT L + EN F+ ++ L + + I I F + L L L
Sbjct: 124 LGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLN 183
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKI 177
+NNIT L +F M L+ L N +
Sbjct: 184 NNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 58 (25.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ LDLS N I E+ P+ F+ ++ L
Sbjct: 329 KLRRLDLSNNQISELAPDAFQGLRSLNSL 357
Score = 49 (22.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 24/143 (16%), Positives = 51/143 (35%)
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ IP+++ ++++R L N I + P N I E+ P+ F+ +
Sbjct: 295 LTEIPTNLPETITEIR---LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGL 351
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
+ L + + + ++ L L L L N+ N
Sbjct: 352 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNK 411
Query: 297 FPVILEKSFSSQFKLQVLCLKRN 319
+ + +FS+ +Q + L +N
Sbjct: 412 LQTVAKGTFSALRAIQTMHLAQN 434
Score = 45 (20.9 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
+K+L L YN I I F+ ++D +L
Sbjct: 153 IKNLQLDYNQISCIEDGAFRALRDLEVL 180
Score = 45 (20.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 29/145 (20%), Positives = 45/145 (31%)
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKL-APRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
K+ IP + + ++LR L +N + L A N I +I F+
Sbjct: 519 KLNKIPDHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFE 575
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
+ S LEN+ M+ L L L L N+
Sbjct: 576 GASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYD 635
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRN 319
N + +F + L L L N
Sbjct: 636 NQITTVAPGAFGTLHSLSTLNLLAN 660
Score = 43 (20.2 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 23/121 (19%), Positives = 40/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + + P + L L L L N+
Sbjct: 314 NSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFE 373
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L V F+ L + + ++
Sbjct: 374 GLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLAQ 433
Query: 343 N 343
N
Sbjct: 434 N 434
Score = 43 (20.2 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 5 LIFM--SKLKSLDLSYNDIVEINPEIFKDIQD 34
L+F+ +KL LDLS N I I + F+ D
Sbjct: 121 LLFLGTAKLYRLDLSENQIQAIPRKAFRGAVD 152
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 147 (56.8 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 47/163 (28%), Positives = 85/163 (52%)
Query: 46 YLLHS--SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEEN 103
Y L+S ++ V CP+ C C + C G + IP ++ T L++ +E +
Sbjct: 387 YHLNSECTSDVACPHKCRCEAS-----VVECS-GLKLSKIP-ERIPQSTTELRLNNNEIS 439
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
T G +F++ HL++++++N+ + I F G S+ L+LT N + S+ F+G
Sbjct: 440 ILEAT-G-LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRG 497
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ L+ L L N+I I + F L ++R+LSL N I+ ++P
Sbjct: 498 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP 540
Score = 144 (55.7 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q EL + N S + A G F + L+ +NL++N ++ + D F+G ++ EL+L
Sbjct: 426 QSTTELRLNNNEISILEATGL--FKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLT 483
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++ES+ S +F L LR L L +NRIS + N I I+P F
Sbjct: 484 ANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAF 543
Query: 234 KDIQELKT 241
+Q L T
Sbjct: 544 DTLQALST 551
Score = 144 (55.7 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 54/155 (34%), Positives = 73/155 (47%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
+S CP MC C+ G IV RG IP + TE+ ++ E N +I P
Sbjct: 164 SSGSCPAMCSCS---NG---IVDCRGKGLTAIPANLPETMTEI-RL---ELN-GIKSIPP 212
Query: 112 -IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
F ++ L + ++N+ I I F G+ SL L L N IT L F G+ LQ L
Sbjct: 213 GAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL 272
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+ NKI I F L +L +LSL N+I LA
Sbjct: 273 LLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 307
Score = 122 (48.0 bits), Expect = 8.9e-11, Sum P(3) = 8.9e-11
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L + P +FQ Q L L ++ + + A+ F G L+ L L N I+ + +
Sbjct: 3 NRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGA 62
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + L+ L L+ N I +IP S F H+ LR L N +
Sbjct: 63 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 103
Score = 104 (41.7 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 294 GNHFPVILEKSFSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN F ++ + S FK LQ++ L N+++ ++ ++FTN++ L L +SYN L + +
Sbjct: 656 GNQFTLVPGQL--STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLA 713
Query: 353 FDPIENSLRDLKISGNNI 370
F + SLR L + GN++
Sbjct: 714 FQGLR-SLRLLSLHGNDV 730
Score = 103 (41.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 129 IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
IP F P+ LR ++L++N I + F+G+ +L L L NKI +P VF L
Sbjct: 210 IPPGAFSPY---RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 266
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
L++L L N+I+ + P N I + F ++ ++T
Sbjct: 267 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 319
Score = 96 (38.9 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + ELH+T + + ++ F G+ LR L L +N I+ + + +F G+ N++ L L
Sbjct: 471 FEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 530
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHN 199
N I +I F L L L+L N
Sbjct: 531 YDNHITTISPGAFDTLQALSTLNLLAN 557
Score = 91 (37.1 bits), Expect = 8.9e-11, Sum P(3) = 8.9e-11
Identities = 29/121 (23%), Positives = 50/121 (41%)
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
G+++I P +S L +DL NQ GN + F
Sbjct: 206 GIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGG 265
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG 367
+ LQ+L L N++ + AF +L NL L + NK+ L +F + +++ L ++
Sbjct: 266 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR-AIQTLHLAQ 324
Query: 368 N 368
N
Sbjct: 325 N 325
Score = 89 (36.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+SIP F LR + L++N+I+++AP N I
Sbjct: 197 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 256
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F + L+ + + I P + L +L L L N+
Sbjct: 257 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNK 302
Score = 87 (35.7 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
+L L+L+ N++ ++ F+G +L+ L LD N+I I F L L VL+L +N I
Sbjct: 20 ALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 79
Query: 202 SKL 204
+ +
Sbjct: 80 TTI 82
Score = 87 (35.7 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 25/99 (25%), Positives = 41/99 (41%)
Query: 148 LTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPR 207
L N + L + F+ L L L N ++++P F +DL+ L L N+IS +
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEG 61
Query: 208 XXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
N+I I F + +L+TF+ S
Sbjct: 62 AFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHS 100
Score = 78 (32.5 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 35/159 (22%), Positives = 63/159 (39%)
Query: 323 KVTTTAFTNLTN-LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXX 381
K T NL + E+ + N + + +F P LR + +S N I
Sbjct: 184 KGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRK-LRRIDLSNNQIAEIAPDAFQGL 242
Query: 382 XXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ TD+P+G+F LQ L L+ N + I +Q L+ L L N
Sbjct: 243 RSLNSLVLYGN-KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDN 301
Query: 442 KFKGFDEKSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
K + + ++ + + +H A+N F ++ A++
Sbjct: 302 KIQSLAKGTFTSLRAIQTLH-LAQNPFICDCNLKWLADF 339
Score = 75 (31.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 30/126 (23%), Positives = 47/126 (37%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N I S+ F L+ + L N+I I F L L L L N+I+ L
Sbjct: 200 IRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLP 259
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I I P+ F+D+Q L ++++ ++ L +
Sbjct: 260 RGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 319
Query: 266 LDLGYN 271
L L N
Sbjct: 320 LHLAQN 325
Score = 72 (30.4 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 21/101 (20%), Positives = 49/101 (48%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+I + ++ +F LS L+ ++L++N++S++ N +
Sbjct: 430 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLES 489
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
+ +F+ + L+T R+ + I+ ++ L ++ L L
Sbjct: 490 VRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 530
Score = 70 (29.7 bits), Expect = 8.9e-11, Sum P(3) = 8.9e-11
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
GLFK HL+ +NLS N + +I + ++ ++ L L+ N+ +
Sbjct: 445 GLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLE 488
Score = 69 (29.3 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 22/113 (19%), Positives = 44/113 (38%)
Query: 256 MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
++ L+ L ++L N+ N + F L+ L
Sbjct: 446 LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLM 505
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+ NR++ + +FT L N+ L + N + + +FD ++ +L L + N
Sbjct: 506 LRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQ-ALSTLNLLAN 557
Score = 62 (26.9 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF++ +L L L N L + AF L +L L + N + L+ F
Sbjct: 680 NKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFA 739
Query: 355 PIENSLRDLKISGN 368
+ SL L I N
Sbjct: 740 DV-TSLSHLAIGAN 752
Score = 62 (26.9 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 15/59 (25%), Positives = 34/59 (57%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T F L++L ++++S NK+ +E +F+ S+ +L ++ N ++
Sbjct: 431 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGA-TSVSELHLTANQLE 488
Score = 61 (26.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 28/128 (21%), Positives = 50/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L+ N + + AF+ L +D+S N++ + +F + SL L + GN I
Sbjct: 202 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLR-SLNSLVLYGNKITDLPR 260
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ I F+ +L L+L N +Q + + S +
Sbjct: 261 GVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 319
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 320 LHLAQNPF 327
Score = 60 (26.2 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I EI P+ F+ ++ L
Sbjct: 220 KLRRIDLSNNQIAEIAPDAFQGLRSLNSL 248
Score = 58 (25.5 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F+ L L + N+ I I F G+ ++R L+L N+IT++ F + L L
Sbjct: 494 MFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLN 553
Query: 172 L 172
L
Sbjct: 554 L 554
Score = 56 (24.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+T +P G +LQ ++LS N + + N + + +LT L LS N
Sbjct: 659 FTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYN 704
Score = 56 (24.8 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 21/102 (20%), Positives = 39/102 (38%)
Query: 337 ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT 396
EL ++ N++ LE + L+ + +S N + A+
Sbjct: 430 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQ-LE 488
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS--NIKLTHL 436
+ G+F+ L+ L L N + IHN + N++L L
Sbjct: 489 SVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 530
Score = 51 (23.0 bits), Expect = 9.9e-08, Sum P(3) = 9.9e-08
Identities = 22/112 (19%), Positives = 37/112 (33%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+FK + LK + + I + + L L NQ
Sbjct: 446 LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLM 505
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N I SF+ +++L L N + ++ AF L L L++ N
Sbjct: 506 LRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 557
Score = 51 (23.0 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 25/121 (20%), Positives = 41/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + I P + L L L L N+
Sbjct: 205 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 264
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N I +F L +L L N++ + FT+L + L ++
Sbjct: 265 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 324
Query: 343 N 343
N
Sbjct: 325 N 325
Score = 49 (22.3 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F+ L+ L+L GN++ + ++ L+HL + N
Sbjct: 709 IPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGAN 752
Score = 47 (21.6 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ N I I P+ F+D+Q+ ++L
Sbjct: 269 LQLLLLNANKINCIRPDAFQDLQNLSLL 296
Score = 46 (21.3 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 20/92 (21%), Positives = 31/92 (33%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I +F L++
Sbjct: 663 PGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRL 722
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ + F ++T+L L I N L
Sbjct: 723 LSLHGNDVSTLQEGIFADVTSLSHLAIGANPL 754
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 208 (78.3 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 83/327 (25%), Positives = 144/327 (44%)
Query: 43 IFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEE 102
+ + L+ S + C C+C + VC+ G IPI +D T VL + S
Sbjct: 5 VLILLVLVSGVISCQSGCKCPT----KTTAVCK-GSSLRSIPI-LLDPRTTVLDL--SNN 56
Query: 103 NPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
+ L+ + + +LE+L + N+ I + F +PSLR L+L+ N++ SL + F
Sbjct: 57 RISRLSADEL-SLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFS 115
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
+ NL+ L + N ++ P F LS L+ LS+A NR+S L P
Sbjct: 116 KLKNLKTLIISSNDVQLGPEC-FAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSA 174
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N ++ + + ++ L+T K + L ++ M+ +L +LD+ N
Sbjct: 175 NKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEEGALY 234
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N V L + S L+ L L N + T +F L L L+IS+
Sbjct: 235 GLEKLETLNLTNNQL-VRLPGNTWSLPALKTLDLSSNLFVSLETASFDGLPALQYLNISH 293
Query: 343 NK-LDRLEVASFDPIENSLRDLKISGN 368
++ L +++A+F + +SL L IS +
Sbjct: 294 SRNLKTIQMATFVQL-SSLHWLSISSS 319
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 77/323 (23%), Positives = 121/323 (37%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNR 200
P L+L++N I+ L NL++L L N I + + VF L LRVL L+ N
Sbjct: 46 PRTTVLDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNS 105
Query: 201 ISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSIL 260
+ L ND V++ PE F + +L+T L + P + L
Sbjct: 106 LLSLPNEVFSKLKNLKTLIISSND-VQLGPECFAGLSQLQTLSIADNRLSFLPPSVLKPL 164
Query: 261 ADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNR 320
+ L LDL N+ N + F SQ +L+ L + N
Sbjct: 165 SGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENL 224
Query: 321 LAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD-PIENSLRDLKISGNNIQXXXXXXXX 379
+ + A L L L+++ N+L RL ++ P +L+ L +S N
Sbjct: 225 IGDIEEGALYGLEKLETLNLTNNQLVRLPGNTWSLP---ALKTLDLSSNLFVSLETASFD 281
Query: 380 XXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLS 439
N I F L +L++S + L IH + L+HLDLS
Sbjct: 282 GLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFNPIPPLSHLDLS 341
Query: 440 RNKFKGFDEKSYIMSEPKNIHKA 462
N+ + +N+H A
Sbjct: 342 NNELRYVAPGMLQWPNIRNLHLA 364
Score = 173 (66.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 77/316 (24%), Positives = 124/316 (39%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L ++N+ I + P+L L L +N+IT L F + +L+ L L N + S+P
Sbjct: 51 LDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLP 110
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
+ VF L +L+ L ++ N + +L P N + + P + K + L+
Sbjct: 111 NEVFSKLKNLKTLIISSNDV-QLGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRN 169
Query: 242 FKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVIL 301
+ L ++ + + L L L L N N I
Sbjct: 170 LDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIE 229
Query: 302 EKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
E + KL+ L L N+L ++ ++ L L LD+S N LE ASFD + +L+
Sbjct: 230 EGALYGLEKLETLNLTNNQLVRLPGNTWS-LPALKTLDLSSNLFVSLETASFDGLP-ALQ 287
Query: 362 DLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQD 421
L IS + I+ T I F P L L+LS N L+
Sbjct: 288 YLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFNPIPPLSHLDLSNNELRY 347
Query: 422 IH-NLLYQSNIKLTHL 436
+ +L NI+ HL
Sbjct: 348 VAPGMLQWPNIRNLHL 363
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 66/287 (22%), Positives = 116/287 (40%)
Query: 90 LGTEVLKIVPS----EENPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSL 143
L +V +PS + + N L P +F + ++L+ L I+++ + +G F G+ L
Sbjct: 85 LSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKLKNLKTLIISSNDVQ-LGPECFAGLSQL 143
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
+ L++ N ++ L K + L+ L L NK+ S+P+SV +L L L L N +S
Sbjct: 144 QTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSS 203
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
L N I +I +++L+T + L + +S+ A L
Sbjct: 204 LETGMFLSQKELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQLVRLPGNTWSLPA-L 262
Query: 264 IYLDLGYNQXXXXXXXXXXXX-XXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLA 322
LDL N + I +F L L + + L
Sbjct: 263 KTLDLSSNLFVSLETASFDGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALT 322
Query: 323 KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNN 369
+ +AF + L LD+S N+L R N +R+L ++ N+
Sbjct: 323 HIHPSAFNPIPPLSHLDLSNNEL-RYVAPGMLQWPN-IRNLHLANND 367
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 146 (56.5 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 46/163 (28%), Positives = 87/163 (53%)
Query: 46 YLLHS--SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEEN 103
Y L+S ++ V+CP+ C C + + C + IP ++ T L++ +E +
Sbjct: 501 YQLNSECNSDVVCPHKCRCEAN-----VVECSSLKLTK-IP-ERIPQSTAELRLNNNEIS 553
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
T G +F++ HL++++++N+ + I F G S+ L+LT N + S+ F+G
Sbjct: 554 ILEAT-G-MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRG 611
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ L+ L L N+I I + F L ++R+LSL N+I+ ++P
Sbjct: 612 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSP 654
Score = 144 (55.7 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q EL + N S + A G F + L+ +NL++N ++ + D F+G ++ EL+L
Sbjct: 540 QSTAELRLNNNEISILEATGM--FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT 597
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++ESI S +F L LR L L +NRIS + N I ++P F
Sbjct: 598 ANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAF 657
Query: 234 KDIQELKT 241
+Q L T
Sbjct: 658 DTLQSLST 665
Score = 143 (55.4 bits), Expect = 9.4e-10, Sum P(4) = 9.4e-10
Identities = 54/155 (34%), Positives = 73/155 (47%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
+S CP MC C+ G IV RG IP + TE+ ++ E N +I P
Sbjct: 278 SSGSCPAMCTCS---NG---IVDCRGKGLTAIPANLPETMTEI-RL---ELN-GIKSIPP 326
Query: 112 -IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
F ++ L + ++N+ I I F G+ SL L L N IT L F G+ LQ L
Sbjct: 327 GAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL 386
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+ NKI I F L +L +LSL N+I LA
Sbjct: 387 LLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Score = 122 (48.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L + P +FQ Q L L ++ + I AI F G L+ L L N I+ + +
Sbjct: 117 NRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGA 176
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + L+ L L+ N I +IP S F H+ LR L N +
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 112 (44.5 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 51/193 (26%), Positives = 77/193 (39%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLT-IGPI-F 113
CP +C C G + C G IP + TE L++ N N++T I F
Sbjct: 34 CPALCTCT----GT-TVDCH-GTGLQAIP-KNIPRNTERLEL-----NGNNITRIHKNDF 81
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
+ L L + + I A+ F + L L L N + L + F+ L L L
Sbjct: 82 AGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLS 141
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N I++IP F +DL+ L L N+IS + N+I I F
Sbjct: 142 ENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSF 201
Query: 234 KDIQELKTFKCRS 246
+ +L+TF+ S
Sbjct: 202 NHMPKLRTFRLHS 214
Score = 105 (42.0 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 294 GNHFPVILEKSFSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN F ++ + S FK LQ++ L N+++ ++ ++FTN++ L L +SYN L + +
Sbjct: 770 GNQFTLVPGQL--STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLA 827
Query: 353 FDPIENSLRDLKISGNNI 370
F + SLR L + GN+I
Sbjct: 828 FQGLR-SLRLLSLHGNDI 844
Score = 104 (41.7 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 32/108 (29%), Positives = 54/108 (50%)
Query: 92 TEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN 151
T + KI S + + G F+ + ELH+T + + +I F G+ LR L L +N
Sbjct: 565 THLKKINLSNNKVSEIEDGA-FEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNN 623
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
I+ + + +F G+ N++ L L N+I ++ F L L L+L N
Sbjct: 624 RISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLAN 671
Score = 103 (41.3 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 129 IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
IP F P+ LR ++L++N I + F+G+ +L L L NKI +P VF L
Sbjct: 324 IPPGAFSPY---RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
L++L L N+I+ + P N I + F ++ ++T
Sbjct: 381 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Score = 91 (37.1 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 29/121 (23%), Positives = 50/121 (41%)
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
G+++I P +S L +DL NQ GN + F
Sbjct: 320 GIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGG 379
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG 367
+ LQ+L L N++ + AF +L NL L + NK+ L +F + +++ L ++
Sbjct: 380 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR-AIQTLHLAQ 438
Query: 368 N 368
N
Sbjct: 439 N 439
Score = 89 (36.4 bits), Expect = 0.00050, Sum P(4) = 0.00050
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+SIP F LR + L++N+I+++AP N I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F + L+ + + I P + L +L L L N+
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNK 416
Score = 78 (32.5 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 35/159 (22%), Positives = 63/159 (39%)
Query: 323 KVTTTAFTNLTN-LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXX 381
K T NL + E+ + N + + +F P LR + +S N I
Sbjct: 298 KGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRK-LRRIDLSNNQIAEIAPDAFQGL 356
Query: 382 XXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ TD+P+G+F LQ L L+ N + I +Q L+ L L N
Sbjct: 357 RSLNSLVLYGN-KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDN 415
Query: 442 KFKGFDEKSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
K + + ++ + + +H A+N F ++ A++
Sbjct: 416 KIQSLAKGTFTSLRAIQTLH-LAQNPFICDCNLKWLADF 453
Score = 76 (31.8 bits), Expect = 9.4e-10, Sum P(4) = 9.4e-10
Identities = 25/113 (22%), Positives = 44/113 (38%)
Query: 256 MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
M+ L L ++L N+ N I F L+ L
Sbjct: 560 MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLM 619
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+ NR++ + +FT L N+ L + N++ + +FD ++ SL L + N
Sbjct: 620 LRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQ-SLSTLNLLAN 671
Score = 75 (31.5 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 23/105 (21%), Positives = 51/105 (48%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+I + ++ +F L+ L+ ++L++N++S++ N +
Sbjct: 544 ELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 603
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
I +F+ + L+T R+ + I+ ++ L ++ L L NQ
Sbjct: 604 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQ 648
Score = 70 (29.7 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 28/132 (21%), Positives = 54/132 (40%)
Query: 140 VP-SLRYLNLTHNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
+P S L L +N I S+L+ FK + +L+++ L NK+ I F + + L L
Sbjct: 538 IPQSTAELRLNNNEI-SILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHL 596
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
N++ + N I I+ + F ++ ++ + ++P
Sbjct: 597 TANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGA 656
Query: 257 YSILADLIYLDL 268
+ L L L+L
Sbjct: 657 FDTLQSLSTLNL 668
Score = 68 (29.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
G+FK HL+ +NLS N + +I + ++ ++ L L+ N+ +
Sbjct: 559 GMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLE 602
Score = 65 (27.9 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T F LT+L ++++S NK+ +E +F+ S+ +L ++ N ++
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAA-SVSELHLTANQLE 602
Score = 63 (27.2 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF++ +L L L N L + AF L +L L + N + L+ F
Sbjct: 794 NKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFA 853
Query: 355 PIENSLRDLKISGN 368
+ SL L I N
Sbjct: 854 DV-TSLSHLAIGAN 866
Score = 61 (26.5 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 28/128 (21%), Positives = 50/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L+ N + + AF+ L +D+S N++ + +F + SL L + GN I
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLR-SLNSLVLYGNKITDLPR 374
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ I F+ +L L+L N +Q + + S +
Sbjct: 375 GVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 434 LHLAQNPF 441
Score = 60 (26.2 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I EI P+ F+ ++ L
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 58 (25.5 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 24/112 (21%), Positives = 40/112 (35%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+FK + LK + + I + A + L L NQ
Sbjct: 560 MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLM 619
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N I SF+ +++L L N++ V+ AF L +L L++ N
Sbjct: 620 LRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLAN 671
Score = 56 (24.8 bits), Expect = 9.4e-10, Sum P(4) = 9.4e-10
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+T +P G +LQ ++LS N + + N + + +LT L LS N
Sbjct: 773 FTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYN 818
Score = 56 (24.8 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 22/102 (21%), Positives = 38/102 (37%)
Query: 337 ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT 396
EL ++ N++ LE L+ + +S N + A+
Sbjct: 544 ELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ-LE 602
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS--NIKLTHL 436
I G+F+ L+ L L N + IHN + N++L L
Sbjct: 603 SIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Score = 51 (23.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 25/121 (20%), Positives = 41/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + I P + L L L L N+
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 378
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N I +F L +L L N++ + FT+L + L ++
Sbjct: 379 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 438
Query: 343 N 343
N
Sbjct: 439 N 439
Score = 50 (22.7 bits), Expect = 3.7e-09, Sum P(4) = 3.7e-09
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F+ L+ L+L GN++ + ++ L+HL + N
Sbjct: 823 IPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGAN 866
Score = 47 (21.6 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ N I I P+ F+D+Q+ ++L
Sbjct: 383 LQLLLLNANKINCIRPDAFQDLQNLSLL 410
Score = 47 (21.6 bits), Expect = 6.7e-08, Sum P(3) = 6.7e-08
Identities = 20/92 (21%), Positives = 31/92 (33%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I +F L++
Sbjct: 777 PGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRL 836
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ + F ++T+L L I N L
Sbjct: 837 LSLHGNDISTLQEGIFADVTSLSHLAIGANPL 868
Score = 37 (18.1 bits), Expect = 9.4e-10, Sum P(4) = 9.4e-10
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 5 LIFMSK--LKSLDLSYNDIVEINPEIFKDIQD 34
L+F + L LDLS N I I + F+ D
Sbjct: 127 LLFQNNQALSRLDLSENAIQAIPRKAFRGATD 158
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 147 (56.8 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 46/163 (28%), Positives = 87/163 (53%)
Query: 46 YLLHS--SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEEN 103
Y L+S ++ V+CP+ C C + C ++ IP ++ T L++ +E +
Sbjct: 364 YQLNSECNSDVVCPHKCRCEAS-----VVECSSLKLSK-IP-ERIPQATAELRLNNNEIS 416
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
T G +F++ HL++++++N+ + I F G S+ L+LT N + S+ F+G
Sbjct: 417 ILEAT-G-MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRG 474
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ L+ L L N+I I + F L ++R+LSL N+I+ ++P
Sbjct: 475 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISP 517
Score = 143 (55.4 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q EL + N S + A G F + L+ +NL++N ++ + D F+G ++ EL+L
Sbjct: 403 QATAELRLNNNEISILEATGM--FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT 460
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++ESI S +F L LR L L +NRIS + N I I+P F
Sbjct: 461 ANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAF 520
Query: 234 KDIQELKT 241
+Q L T
Sbjct: 521 DTLQALST 528
Score = 141 (54.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 53/155 (34%), Positives = 73/155 (47%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
+S CP MC C+ G IV RG IP + TE+ ++ E N +I P
Sbjct: 142 SSGSCPAMCACS---NG---IVDCRGKGLTAIPANLPETMTEI-RL---ELN-GIKSIPP 190
Query: 112 -IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
F ++ L + ++N+ I I F G+ SL L L N IT L F G+ LQ L
Sbjct: 191 GAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLFTLQLL 250
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+ NKI + F L +L +LSL N+I LA
Sbjct: 251 LLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLA 285
Score = 105 (42.0 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 294 GNHFPVILEKSFSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN F +L S FK LQ++ L N+++ ++ ++FTN++ L L +SYN L + +
Sbjct: 633 GNQF--MLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLA 690
Query: 353 FDPIENSLRDLKISGNNI 370
F + SLR L + GN+I
Sbjct: 691 FQGLR-SLRLLSLHGNDI 707
Score = 103 (41.3 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 92 TEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN 151
T + KI S + + G F+ + ELH+T + + +I F G+ LR L L +N
Sbjct: 428 THLKKINLSNNKVSEIEDGA-FEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNN 486
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
I+ + + +F G+ N++ L L N+I +I F L L L+L N
Sbjct: 487 RISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 534
Score = 101 (40.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 129 IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
IP F P+ LR ++L++N I+ + F+G+ +L L L NKI +P VF L
Sbjct: 188 IPPGAFSPY---RKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 244
Query: 189 SDLRVLSLAHNRISKLAP 206
L++L L N+I+ + P
Sbjct: 245 FTLQLLLLNANKINCVRP 262
Score = 98 (39.6 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 124 ITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSS 183
++ + I AI F G L+ L L N I+ + + F+ + L+ L L+ N I +IP S
Sbjct: 4 LSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVS 63
Query: 184 VFMHLSDLRVLSLAHNRI 201
F H+ LR L N +
Sbjct: 64 SFNHMPKLRTFRLHSNHL 81
Score = 94 (38.1 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 31/121 (25%), Positives = 50/121 (41%)
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
G+++I P +S L +DL NQ GN + F
Sbjct: 184 GIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGG 243
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG 367
F LQ+L L N++ V AF +L NL L + NK+ L +F + +++ L ++
Sbjct: 244 LFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLR-AIQTLHLAQ 302
Query: 368 N 368
N
Sbjct: 303 N 303
Score = 89 (36.4 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+SIP F LR + L++N+IS++AP N I
Sbjct: 175 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKIT 234
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F + L+ + + + P + L +L L L N+
Sbjct: 235 DLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNK 280
Score = 86 (35.3 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 147 NLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
+L+ N I ++ F+G +L+ L LD N+I I F L L VL+L +N IS +
Sbjct: 3 DLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTI 60
Score = 82 (33.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/147 (23%), Positives = 59/147 (40%)
Query: 323 KVTTTAFTNLTN-LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXX 381
K T NL + E+ + N + + +F P LR + +S N I
Sbjct: 162 KGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRK-LRRIDLSNNQISEIAPDAFQGL 220
Query: 382 XXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ TD+P+G+F LQ L L+ N + + +Q L+ L L N
Sbjct: 221 RSLNSLVLYGN-KITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDN 279
Query: 442 KFKGFDEKSYI-MSEPKNIHKAAKNSF 467
K +G + ++ + + +H A+N F
Sbjct: 280 KIQGLAKGTFTSLRAIQTLH-LAQNPF 305
Score = 75 (31.5 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 23/105 (21%), Positives = 51/105 (48%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+I + ++ +F L+ L+ ++L++N++S++ N +
Sbjct: 407 ELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 466
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
I +F+ + L+T R+ + I+ ++ L ++ L L NQ
Sbjct: 467 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQ 511
Score = 74 (31.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 29/126 (23%), Positives = 46/126 (36%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N I S+ F L+ + L N+I I F L L L L N+I+ L
Sbjct: 178 IRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLP 237
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I + P+ F+D+Q L ++ + ++ L +
Sbjct: 238 RGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQT 297
Query: 266 LDLGYN 271
L L N
Sbjct: 298 LHLAQN 303
Score = 73 (30.8 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 24/113 (21%), Positives = 44/113 (38%)
Query: 256 MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
M+ L L ++L N+ N I F L+ L
Sbjct: 423 MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLM 482
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+ NR++ + +FT L N+ L + N++ + +FD ++ +L L + N
Sbjct: 483 LRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQ-ALSTLNLLAN 534
Score = 71 (30.1 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 21/75 (28%), Positives = 32/75 (42%)
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L N I++IP F +DL+ L L N+IS + N+I I
Sbjct: 4 LSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVS 63
Query: 232 IFKDIQELKTFKCRS 246
F + +L+TF+ S
Sbjct: 64 SFNHMPKLRTFRLHS 78
Score = 68 (29.0 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
G+FK HL+ +NLS N + +I + ++ ++ L L+ N+ +
Sbjct: 422 GMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLE 465
Score = 68 (29.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 27/125 (21%), Positives = 51/125 (40%)
Query: 146 LNLTHNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
L L +N I S+L+ FK + +L+++ L NK+ I F + + L L N++
Sbjct: 408 LRLNNNEI-SILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 466
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
+ N I I+ + F ++ ++ + I+P + L L
Sbjct: 467 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQAL 526
Query: 264 IYLDL 268
L+L
Sbjct: 527 STLNL 531
Score = 65 (27.9 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T F LT+L ++++S NK+ +E +F+ S+ +L ++ N ++
Sbjct: 408 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAA-SVSELHLTANQLE 465
Score = 63 (27.2 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF++ +L L L N L + AF L +L L + N + L+ F
Sbjct: 657 NKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFA 716
Query: 355 PIENSLRDLKISGN 368
+ SL L I N
Sbjct: 717 DV-TSLSHLAIGAN 729
Score = 58 (25.5 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I EI P+ F+ ++ L
Sbjct: 198 KLRRIDLSNNQISEIAPDAFQGLRSLNSL 226
Score = 58 (25.5 bits), Expect = 7.9e-08, Sum P(3) = 7.9e-08
Identities = 24/112 (21%), Positives = 40/112 (35%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+FK + LK + + I + A + L L NQ
Sbjct: 423 MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLM 482
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N I SF+ +++L L N++A ++ AF L L L++ N
Sbjct: 483 LRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 534
Score = 56 (24.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 22/102 (21%), Positives = 38/102 (37%)
Query: 337 ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT 396
EL ++ N++ LE L+ + +S N + A+
Sbjct: 407 ELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ-LE 465
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS--NIKLTHL 436
I G+F+ L+ L L N + IHN + N++L L
Sbjct: 466 SIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 507
Score = 53 (23.7 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 392 DMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
D N + G +LQ ++LS N + + N + + +LT L LS N
Sbjct: 632 DGNQFMLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYN 681
Score = 52 (23.4 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ L+ L + + I I F + L L L +NNI+++ +F M L+ L
Sbjct: 17 FRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRL 76
Query: 173 DFNKI 177
N +
Sbjct: 77 HSNHL 81
Score = 50 (22.7 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F+ L+ L+L GN++ + ++ L+HL + N
Sbjct: 686 IPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGAN 729
Score = 47 (21.6 bits), Expect = 7.1e-08, Sum P(3) = 7.1e-08
Identities = 20/92 (21%), Positives = 31/92 (33%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I +F L++
Sbjct: 640 PGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRL 699
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ + F ++T+L L I N L
Sbjct: 700 LSLHGNDISTLQEGIFADVTSLSHLAIGANPL 731
Score = 46 (21.3 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ N I + P+ F+D+Q+ ++L
Sbjct: 247 LQLLLLNANKINCVRPDAFQDLQNLSLL 274
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 147 (56.8 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 47/163 (28%), Positives = 85/163 (52%)
Query: 46 YLLHS--SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEEN 103
Y L+S ++ V CP+ C C + C G + IP ++ T L++ +E +
Sbjct: 501 YHLNSECTSDVACPHKCRCEAS-----VVECS-GLKLSKIP-ERIPQSTTELRLNNNEIS 553
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
T G +F++ HL++++++N+ + I F G S+ L+LT N + S+ F+G
Sbjct: 554 ILEAT-G-LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRG 611
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ L+ L L N+I I + F L ++R+LSL N I+ ++P
Sbjct: 612 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP 654
Score = 144 (55.7 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q EL + N S + A G F + L+ +NL++N ++ + D F+G ++ EL+L
Sbjct: 540 QSTTELRLNNNEISILEATGL--FKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLT 597
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++ES+ S +F L LR L L +NRIS + N I I+P F
Sbjct: 598 ANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAF 657
Query: 234 KDIQELKT 241
+Q L T
Sbjct: 658 DTLQALST 665
Score = 144 (55.7 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 54/155 (34%), Positives = 73/155 (47%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
+S CP MC C+ G IV RG IP + TE+ ++ E N +I P
Sbjct: 278 SSGSCPAMCSCS---NG---IVDCRGKGLTAIPANLPETMTEI-RL---ELN-GIKSIPP 326
Query: 112 -IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
F ++ L + ++N+ I I F G+ SL L L N IT L F G+ LQ L
Sbjct: 327 GAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL 386
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+ NKI I F L +L +LSL N+I LA
Sbjct: 387 LLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Score = 122 (48.0 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L + P +FQ Q L L ++ + + A+ F G L+ L L N I+ + +
Sbjct: 117 NRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGA 176
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + L+ L L+ N I +IP S F H+ LR L N +
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 110 (43.8 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 49/193 (25%), Positives = 77/193 (39%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLT-IGPI-F 113
CP +C C G + C G IP + TE L++ N N++T I F
Sbjct: 34 CPALCTCT----GT-TVDCH-GTGLQAIP-KNIPRNTERLEL-----NGNNITRIHKNDF 81
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
+ L L + + I A+ F + L L L N + L + F+ L L L
Sbjct: 82 AGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLS 141
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N ++++P F +DL+ L L N+IS + N+I I F
Sbjct: 142 ENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSF 201
Query: 234 KDIQELKTFKCRS 246
+ +L+TF+ S
Sbjct: 202 NHMPKLRTFRLHS 214
Score = 104 (41.7 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 294 GNHFPVILEKSFSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN F ++ + S FK LQ++ L N+++ ++ ++FTN++ L L +SYN L + +
Sbjct: 770 GNQFTLVPGQL--STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLA 827
Query: 353 FDPIENSLRDLKISGNNI 370
F + SLR L + GN++
Sbjct: 828 FQGLR-SLRLLSLHGNDV 844
Score = 103 (41.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 129 IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
IP F P+ LR ++L++N I + F+G+ +L L L NKI +P VF L
Sbjct: 324 IPPGAFSPY---RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
L++L L N+I+ + P N I + F ++ ++T
Sbjct: 381 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Score = 96 (38.9 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + ELH+T + + ++ F G+ LR L L +N I+ + + +F G+ N++ L L
Sbjct: 585 FEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHN 199
N I +I F L L L+L N
Sbjct: 645 YDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 91 (37.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 29/121 (23%), Positives = 50/121 (41%)
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
G+++I P +S L +DL NQ GN + F
Sbjct: 320 GIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGG 379
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG 367
+ LQ+L L N++ + AF +L NL L + NK+ L +F + +++ L ++
Sbjct: 380 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR-AIQTLHLAQ 438
Query: 368 N 368
N
Sbjct: 439 N 439
Score = 89 (36.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+SIP F LR + L++N+I+++AP N I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F + L+ + + I P + L +L L L N+
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNK 416
Score = 81 (33.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 29/126 (23%), Positives = 48/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L NNIT + +F G+ L+ L L N+I ++ F + +L L L N++ L
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N + + + F+ +LK + + I + L L
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEV 185
Query: 266 LDLGYN 271
L L N
Sbjct: 186 LTLNNN 191
Score = 78 (32.5 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 35/159 (22%), Positives = 63/159 (39%)
Query: 323 KVTTTAFTNLTN-LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXX 381
K T NL + E+ + N + + +F P LR + +S N I
Sbjct: 298 KGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRK-LRRIDLSNNQIAEIAPDAFQGL 356
Query: 382 XXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ TD+P+G+F LQ L L+ N + I +Q L+ L L N
Sbjct: 357 RSLNSLVLYGN-KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDN 415
Query: 442 KFKGFDEKSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
K + + ++ + + +H A+N F ++ A++
Sbjct: 416 KIQSLAKGTFTSLRAIQTLH-LAQNPFICDCNLKWLADF 453
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 30/126 (23%), Positives = 47/126 (37%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N I S+ F L+ + L N+I I F L L L L N+I+ L
Sbjct: 314 IRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLP 373
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I I P+ F+D+Q L ++++ ++ L +
Sbjct: 374 RGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Query: 266 LDLGYN 271
L L N
Sbjct: 434 LHLAQN 439
Score = 72 (30.4 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 21/101 (20%), Positives = 49/101 (48%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+I + ++ +F LS L+ ++L++N++S++ N +
Sbjct: 544 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLES 603
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
+ +F+ + L+T R+ + I+ ++ L ++ L L
Sbjct: 604 VRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Score = 70 (29.7 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
GLFK HL+ +NLS N + +I + ++ ++ L L+ N+ +
Sbjct: 559 GLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLE 602
Score = 69 (29.3 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 22/113 (19%), Positives = 44/113 (38%)
Query: 256 MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
++ L+ L ++L N+ N + F L+ L
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLM 619
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+ NR++ + +FT L N+ L + N + + +FD ++ +L L + N
Sbjct: 620 LRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQ-ALSTLNLLAN 671
Score = 62 (26.9 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF++ +L L L N L + AF L +L L + N + L+ F
Sbjct: 794 NKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFA 853
Query: 355 PIENSLRDLKISGN 368
+ SL L I N
Sbjct: 854 DV-TSLSHLAIGAN 866
Score = 62 (26.9 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 15/59 (25%), Positives = 34/59 (57%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T F L++L ++++S NK+ +E +F+ S+ +L ++ N ++
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGA-TSVSELHLTANQLE 602
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 28/128 (21%), Positives = 50/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L+ N + + AF+ L +D+S N++ + +F + SL L + GN I
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLR-SLNSLVLYGNKITDLPR 374
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ I F+ +L L+L N +Q + + S +
Sbjct: 375 GVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 434 LHLAQNPF 441
Score = 60 (26.2 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I EI P+ F+ ++ L
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 58 (25.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F+ L L + N+ I I F G+ ++R L+L N+IT++ F + L L
Sbjct: 608 MFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLN 667
Query: 172 L 172
L
Sbjct: 668 L 668
Score = 56 (24.8 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+T +P G +LQ ++LS N + + N + + +LT L LS N
Sbjct: 773 FTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYN 818
Score = 56 (24.8 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 21/102 (20%), Positives = 39/102 (38%)
Query: 337 ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT 396
EL ++ N++ LE + L+ + +S N + A+
Sbjct: 544 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQ-LE 602
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS--NIKLTHL 436
+ G+F+ L+ L L N + IHN + N++L L
Sbjct: 603 SVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Score = 51 (23.0 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 22/112 (19%), Positives = 37/112 (33%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+FK + LK + + I + + L L NQ
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLM 619
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N I SF+ +++L L N + ++ AF L L L++ N
Sbjct: 620 LRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 51 (23.0 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 25/121 (20%), Positives = 41/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + I P + L L L L N+
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 378
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N I +F L +L L N++ + FT+L + L ++
Sbjct: 379 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 438
Query: 343 N 343
N
Sbjct: 439 N 439
Score = 49 (22.3 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F+ L+ L+L GN++ + ++ L+HL + N
Sbjct: 823 IPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGAN 866
Score = 47 (21.6 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ N I I P+ F+D+Q+ ++L
Sbjct: 383 LQLLLLNANKINCIRPDAFQDLQNLSLL 410
Score = 46 (21.3 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 20/92 (21%), Positives = 31/92 (33%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I +F L++
Sbjct: 777 PGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRL 836
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ + F ++T+L L I N L
Sbjct: 837 LSLHGNDVSTLQEGIFADVTSLSHLAIGANPL 868
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 147 (56.8 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 47/163 (28%), Positives = 85/163 (52%)
Query: 46 YLLHS--SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEEN 103
Y L+S ++ V CP+ C C + C G + IP ++ T L++ +E +
Sbjct: 501 YHLNSECTSDVACPHKCRCEAS-----VVECS-GLKLSKIP-ERIPQSTTELRLNNNEIS 553
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
T G +F++ HL++++++N+ + I F G S+ L+LT N + S+ F+G
Sbjct: 554 ILEAT-G-LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRG 611
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ L+ L L N+I I + F L ++R+LSL N I+ ++P
Sbjct: 612 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP 654
Score = 144 (55.7 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q EL + N S + A G F + L+ +NL++N ++ + D F+G ++ EL+L
Sbjct: 540 QSTTELRLNNNEISILEATGL--FKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLT 597
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++ES+ S +F L LR L L +NRIS + N I I+P F
Sbjct: 598 ANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAF 657
Query: 234 KDIQELKT 241
+Q L T
Sbjct: 658 DTLQALST 665
Score = 144 (55.7 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 54/155 (34%), Positives = 73/155 (47%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
+S CP MC C+ G IV RG IP + TE+ ++ E N +I P
Sbjct: 278 SSGSCPAMCSCS---NG---IVDCRGKGLTAIPANLPETMTEI-RL---ELN-GIKSIPP 326
Query: 112 -IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
F ++ L + ++N+ I I F G+ SL L L N IT L F G+ LQ L
Sbjct: 327 GAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL 386
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+ NKI I F L +L +LSL N+I LA
Sbjct: 387 LLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Score = 122 (48.0 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L + P +FQ Q L L ++ + + A+ F G L+ L L N I+ + +
Sbjct: 117 NRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGA 176
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + L+ L L+ N I +IP S F H+ LR L N +
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 110 (43.8 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 49/193 (25%), Positives = 77/193 (39%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLT-IGPI-F 113
CP +C C G + C G IP + TE L++ N N++T I F
Sbjct: 34 CPALCTCT----GT-TVDCH-GTGLQAIP-KNIPRNTERLEL-----NGNNITRIHKNDF 81
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
+ L L + + I A+ F + L L L N + L + F+ L L L
Sbjct: 82 AGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLS 141
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N ++++P F +DL+ L L N+IS + N+I I F
Sbjct: 142 ENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSF 201
Query: 234 KDIQELKTFKCRS 246
+ +L+TF+ S
Sbjct: 202 NHMPKLRTFRLHS 214
Score = 104 (41.7 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 294 GNHFPVILEKSFSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN F ++ + S FK LQ++ L N+++ ++ ++FTN++ L L +SYN L + +
Sbjct: 770 GNQFTLVPGQL--STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLA 827
Query: 353 FDPIENSLRDLKISGNNI 370
F + SLR L + GN++
Sbjct: 828 FQGLR-SLRLLSLHGNDV 844
Score = 103 (41.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 129 IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
IP F P+ LR ++L++N I + F+G+ +L L L NKI +P VF L
Sbjct: 324 IPPGAFSPY---RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
L++L L N+I+ + P N I + F ++ ++T
Sbjct: 381 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Score = 96 (38.9 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + ELH+T + + ++ F G+ LR L L +N I+ + + +F G+ N++ L L
Sbjct: 585 FEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHN 199
N I +I F L L L+L N
Sbjct: 645 YDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 91 (37.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 29/121 (23%), Positives = 50/121 (41%)
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
G+++I P +S L +DL NQ GN + F
Sbjct: 320 GIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGG 379
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG 367
+ LQ+L L N++ + AF +L NL L + NK+ L +F + +++ L ++
Sbjct: 380 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR-AIQTLHLAQ 438
Query: 368 N 368
N
Sbjct: 439 N 439
Score = 89 (36.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+SIP F LR + L++N+I+++AP N I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F + L+ + + I P + L +L L L N+
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNK 416
Score = 81 (33.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 29/126 (23%), Positives = 48/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L NNIT + +F G+ L+ L L N+I ++ F + +L L L N++ L
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N + + + F+ +LK + + I + L L
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEV 185
Query: 266 LDLGYN 271
L L N
Sbjct: 186 LTLNNN 191
Score = 78 (32.5 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 35/159 (22%), Positives = 63/159 (39%)
Query: 323 KVTTTAFTNLTN-LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXX 381
K T NL + E+ + N + + +F P LR + +S N I
Sbjct: 298 KGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRK-LRRIDLSNNQIAEIAPDAFQGL 356
Query: 382 XXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ TD+P+G+F LQ L L+ N + I +Q L+ L L N
Sbjct: 357 RSLNSLVLYGN-KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDN 415
Query: 442 KFKGFDEKSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
K + + ++ + + +H A+N F ++ A++
Sbjct: 416 KIQSLAKGTFTSLRAIQTLH-LAQNPFICDCNLKWLADF 453
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 30/126 (23%), Positives = 47/126 (37%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N I S+ F L+ + L N+I I F L L L L N+I+ L
Sbjct: 314 IRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLP 373
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I I P+ F+D+Q L ++++ ++ L +
Sbjct: 374 RGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Query: 266 LDLGYN 271
L L N
Sbjct: 434 LHLAQN 439
Score = 72 (30.4 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 21/101 (20%), Positives = 49/101 (48%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+I + ++ +F LS L+ ++L++N++S++ N +
Sbjct: 544 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLES 603
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
+ +F+ + L+T R+ + I+ ++ L ++ L L
Sbjct: 604 VRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Score = 70 (29.7 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
GLFK HL+ +NLS N + +I + ++ ++ L L+ N+ +
Sbjct: 559 GLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLE 602
Score = 69 (29.3 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 22/113 (19%), Positives = 44/113 (38%)
Query: 256 MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
++ L+ L ++L N+ N + F L+ L
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLM 619
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+ NR++ + +FT L N+ L + N + + +FD ++ +L L + N
Sbjct: 620 LRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQ-ALSTLNLLAN 671
Score = 62 (26.9 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF++ +L L L N L + AF L +L L + N + L+ F
Sbjct: 794 NKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFA 853
Query: 355 PIENSLRDLKISGN 368
+ SL L I N
Sbjct: 854 DV-TSLSHLAIGAN 866
Score = 62 (26.9 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 15/59 (25%), Positives = 34/59 (57%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T F L++L ++++S NK+ +E +F+ S+ +L ++ N ++
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGA-TSVSELHLTANQLE 602
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 28/128 (21%), Positives = 50/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L+ N + + AF+ L +D+S N++ + +F + SL L + GN I
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLR-SLNSLVLYGNKITDLPR 374
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ I F+ +L L+L N +Q + + S +
Sbjct: 375 GVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 434 LHLAQNPF 441
Score = 60 (26.2 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I EI P+ F+ ++ L
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 58 (25.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F+ L L + N+ I I F G+ ++R L+L N+IT++ F + L L
Sbjct: 608 MFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLN 667
Query: 172 L 172
L
Sbjct: 668 L 668
Score = 56 (24.8 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+T +P G +LQ ++LS N + + N + + +LT L LS N
Sbjct: 773 FTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYN 818
Score = 56 (24.8 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 21/102 (20%), Positives = 39/102 (38%)
Query: 337 ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT 396
EL ++ N++ LE + L+ + +S N + A+
Sbjct: 544 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQ-LE 602
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS--NIKLTHL 436
+ G+F+ L+ L L N + IHN + N++L L
Sbjct: 603 SVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Score = 51 (23.0 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 22/112 (19%), Positives = 37/112 (33%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+FK + LK + + I + + L L NQ
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLM 619
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N I SF+ +++L L N + ++ AF L L L++ N
Sbjct: 620 LRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 51 (23.0 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 25/121 (20%), Positives = 41/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + I P + L L L L N+
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 378
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N I +F L +L L N++ + FT+L + L ++
Sbjct: 379 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 438
Query: 343 N 343
N
Sbjct: 439 N 439
Score = 49 (22.3 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F+ L+ L+L GN++ + ++ L+HL + N
Sbjct: 823 IPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGAN 866
Score = 47 (21.6 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ N I I P+ F+D+Q+ ++L
Sbjct: 383 LQLLLLNANKINCIRPDAFQDLQNLSLL 410
Score = 46 (21.3 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 20/92 (21%), Positives = 31/92 (33%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I +F L++
Sbjct: 777 PGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRL 836
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ + F ++T+L L I N L
Sbjct: 837 LSLHGNDVSTLQEGIFADVTSLSHLAIGANPL 868
>TAIR|locus:2197586 [details] [associations]
symbol:AT1G33600 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0007165 "signal
transduction" evidence=IC] [GO:0005618 "cell wall" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009505 "plant-type cell
wall" evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010310 "regulation
of hydrogen peroxide metabolic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0031348 "negative regulation of defense response" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
Pfam:PF00560 InterPro:IPR001611 EMBL:CP002684 GO:GO:0016020
GO:GO:0009505 EMBL:AC069299 HSSP:P25147 InterPro:IPR013210
Pfam:PF08263 HOGENOM:HOG000066206 ProtClustDB:CLSN2679289
IPI:IPI00531467 PIR:H86459 RefSeq:NP_174624.1 UniGene:At.28157
UniGene:At.67613 ProteinModelPortal:Q9FW48 SMR:Q9FW48 STRING:Q9FW48
PRIDE:Q9FW48 EnsemblPlants:AT1G33600.1 GeneID:840254
KEGG:ath:AT1G33600 TAIR:At1g33600 InParanoid:Q9FW48
PhylomeDB:Q9FW48 ArrayExpress:Q9FW48 Genevestigator:Q9FW48
Uniprot:Q9FW48
Length = 478
Score = 206 (77.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 86/341 (25%), Positives = 136/341 (39%)
Query: 108 TIGPIFQQFQHLEELHITNSFIPAIGFHPF-WGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
TI P + QHL ++ TN F F + +P+++ + T++ ++ L N +
Sbjct: 92 TISPSLAKLQHLVGIYFTNLRNITGSFPQFLFQLPNVKQVYFTNSRLSGPLPANIGALSE 151
Query: 167 LQELYLDFNKIES-IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
L EL LD N IPSS+ +L+ L +L+L N ++ P N +
Sbjct: 152 LGELSLDGNLFTGPIPSSI-SNLTRLYLLNLGDNLLTGTIPLGLANLKILLSLNFGNNRL 210
Query: 226 VEINPEIFKDIQELKTFKC-RSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXX 284
E P+IFK +Q+L++ R+ N+ P + S+ L YLDL N
Sbjct: 211 SETIPDIFKSMQKLQSLTLSRNKFSGNLPPSIASLKPILNYLDLSQNNLSGTIPTFLSNF 270
Query: 285 XXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
N F ++ KS ++ KL L L N L A N+ L LD+SYN+
Sbjct: 271 KVLDSLDLSRNRFSGVVPKSLANMPKLFHLNLSHNFLTG-PLPAMKNVDGLATLDLSYNQ 329
Query: 345 LDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK 404
+ + S+ LK+ I +++ + F
Sbjct: 330 FHLKTIPKWVTSSPSMYSLKLVKCGINMSLDNWKPVRPNIYFYIDLSENEISGSLTWFFN 389
Query: 405 MNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKG 445
+ +L SGN L+ L S +L LDLSRN G
Sbjct: 390 LAHNLYEFQASGNKLRFDMGKLNLSE-RLESLDLSRNLIFG 429
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 146 (56.5 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 46/163 (28%), Positives = 87/163 (53%)
Query: 46 YLLHS--SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEEN 103
Y L+S ++ V+CP+ C C + + C + IP ++ T L++ +E +
Sbjct: 501 YQLNSECNSDVVCPHKCRCEAN-----VVECSSLKLTK-IP-ERIPQSTAELRLNNNEIS 553
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
T G +F++ HL++++++N+ + I F G S+ L+LT N + S+ F+G
Sbjct: 554 ILEAT-G-MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRG 611
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ L+ L L N+I I + F L ++R+LSL N+I+ ++P
Sbjct: 612 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSP 654
Score = 144 (55.7 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q EL + N S + A G F + L+ +NL++N ++ + D F+G ++ EL+L
Sbjct: 540 QSTAELRLNNNEISILEATGM--FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT 597
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++ESI S +F L LR L L +NRIS + N I ++P F
Sbjct: 598 ANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAF 657
Query: 234 KDIQELKT 241
+Q L T
Sbjct: 658 DTLQSLST 665
Score = 143 (55.4 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 54/155 (34%), Positives = 73/155 (47%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
+S CP MC C+ G IV RG IP + TE+ ++ E N +I P
Sbjct: 278 SSGSCPAMCTCS---NG---IVDCRGKGLTAIPANLPETMTEI-RL---ELN-GIKSIPP 326
Query: 112 -IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
F ++ L + ++N+ I I F G+ SL L L N IT L F G+ LQ L
Sbjct: 327 GAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL 386
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+ NKI I F L +L +LSL N+I LA
Sbjct: 387 LLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Score = 122 (48.0 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L + P +FQ Q L L ++ + I AI F G L+ L L N I+ + +
Sbjct: 117 NRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGA 176
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + L+ L L+ N I +IP S F H+ LR L N +
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 112 (44.5 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 51/193 (26%), Positives = 77/193 (39%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLT-IGPI-F 113
CP +C C G + C G IP + TE L++ N N++T I F
Sbjct: 34 CPALCTCT----GT-TVDCH-GTGLQAIP-KNIPRNTERLEL-----NGNNITRIHKNDF 81
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
+ L L + + I A+ F + L L L N + L + F+ L L L
Sbjct: 82 AGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLS 141
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N I++IP F +DL+ L L N+IS + N+I I F
Sbjct: 142 ENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSF 201
Query: 234 KDIQELKTFKCRS 246
+ +L+TF+ S
Sbjct: 202 NHMPKLRTFRLHS 214
Score = 105 (42.0 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 294 GNHFPVILEKSFSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN F ++ + S FK LQ++ L N+++ ++ ++FTN++ L L +SYN L + +
Sbjct: 770 GNQFTLVPGQL--STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLA 827
Query: 353 FDPIENSLRDLKISGNNI 370
F + SLR L + GN+I
Sbjct: 828 FQGLR-SLRLLSLHGNDI 844
Score = 104 (41.7 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 32/108 (29%), Positives = 54/108 (50%)
Query: 92 TEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN 151
T + KI S + + G F+ + ELH+T + + +I F G+ LR L L +N
Sbjct: 565 THLKKINLSNNKVSEIEDGA-FEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNN 623
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
I+ + + +F G+ N++ L L N+I ++ F L L L+L N
Sbjct: 624 RISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLAN 671
Score = 103 (41.3 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 129 IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
IP F P+ LR ++L++N I + F+G+ +L L L NKI +P VF L
Sbjct: 324 IPPGAFSPY---RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
L++L L N+I+ + P N I + F ++ ++T
Sbjct: 381 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Score = 91 (37.1 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 29/121 (23%), Positives = 50/121 (41%)
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
G+++I P +S L +DL NQ GN + F
Sbjct: 320 GIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGG 379
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG 367
+ LQ+L L N++ + AF +L NL L + NK+ L +F + +++ L ++
Sbjct: 380 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR-AIQTLHLAQ 438
Query: 368 N 368
N
Sbjct: 439 N 439
Score = 89 (36.4 bits), Expect = 0.00060, Sum P(4) = 0.00060
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+SIP F LR + L++N+I+++AP N I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F + L+ + + I P + L +L L L N+
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNK 416
Score = 78 (32.5 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 35/159 (22%), Positives = 63/159 (39%)
Query: 323 KVTTTAFTNLTN-LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXX 381
K T NL + E+ + N + + +F P LR + +S N I
Sbjct: 298 KGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRK-LRRIDLSNNQIAEIAPDAFQGL 356
Query: 382 XXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ TD+P+G+F LQ L L+ N + I +Q L+ L L N
Sbjct: 357 RSLNSLVLYGN-KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDN 415
Query: 442 KFKGFDEKSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
K + + ++ + + +H A+N F ++ A++
Sbjct: 416 KIQSLAKGTFTSLRAIQTLH-LAQNPFICDCNLKWLADF 453
Score = 76 (31.8 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 25/113 (22%), Positives = 44/113 (38%)
Query: 256 MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
M+ L L ++L N+ N I F L+ L
Sbjct: 560 MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLM 619
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+ NR++ + +FT L N+ L + N++ + +FD ++ SL L + N
Sbjct: 620 LRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQ-SLSTLNLLAN 671
Score = 75 (31.5 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 23/105 (21%), Positives = 51/105 (48%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+I + ++ +F L+ L+ ++L++N++S++ N +
Sbjct: 544 ELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 603
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
I +F+ + L+T R+ + I+ ++ L ++ L L NQ
Sbjct: 604 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQ 648
Score = 70 (29.7 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 28/132 (21%), Positives = 54/132 (40%)
Query: 140 VP-SLRYLNLTHNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
+P S L L +N I S+L+ FK + +L+++ L NK+ I F + + L L
Sbjct: 538 IPQSTAELRLNNNEI-SILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHL 596
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
N++ + N I I+ + F ++ ++ + ++P
Sbjct: 597 TANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGA 656
Query: 257 YSILADLIYLDL 268
+ L L L+L
Sbjct: 657 FDTLQSLSTLNL 668
Score = 68 (29.0 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
G+FK HL+ +NLS N + +I + ++ ++ L L+ N+ +
Sbjct: 559 GMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLE 602
Score = 65 (27.9 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T F LT+L ++++S NK+ +E +F+ S+ +L ++ N ++
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAA-SVSELHLTANQLE 602
Score = 63 (27.2 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF++ +L L L N L + AF L +L L + N + L+ F
Sbjct: 794 NKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFA 853
Query: 355 PIENSLRDLKISGN 368
+ SL L I N
Sbjct: 854 DV-TSLSHLAIGAN 866
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 28/128 (21%), Positives = 50/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L+ N + + AF+ L +D+S N++ + +F + SL L + GN I
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLR-SLNSLVLYGNKITDLPR 374
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ I F+ +L L+L N +Q + + S +
Sbjct: 375 GVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 434 LHLAQNPF 441
Score = 60 (26.2 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I EI P+ F+ ++ L
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 58 (25.5 bits), Expect = 6.7e-08, Sum P(4) = 6.7e-08
Identities = 24/112 (21%), Positives = 40/112 (35%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+FK + LK + + I + A + L L NQ
Sbjct: 560 MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLM 619
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N I SF+ +++L L N++ V+ AF L +L L++ N
Sbjct: 620 LRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLAN 671
Score = 56 (24.8 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+T +P G +LQ ++LS N + + N + + +LT L LS N
Sbjct: 773 FTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYN 818
Score = 56 (24.8 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 22/102 (21%), Positives = 38/102 (37%)
Query: 337 ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT 396
EL ++ N++ LE L+ + +S N + A+
Sbjct: 544 ELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ-LE 602
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS--NIKLTHL 436
I G+F+ L+ L L N + IHN + N++L L
Sbjct: 603 SIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Score = 51 (23.0 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 25/121 (20%), Positives = 41/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + I P + L L L L N+
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 378
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N I +F L +L L N++ + FT+L + L ++
Sbjct: 379 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 438
Query: 343 N 343
N
Sbjct: 439 N 439
Score = 50 (22.7 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F+ L+ L+L GN++ + ++ L+HL + N
Sbjct: 823 IPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGAN 866
Score = 47 (21.6 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ N I I P+ F+D+Q+ ++L
Sbjct: 383 LQLLLLNANKINCIRPDAFQDLQNLSLL 410
Score = 47 (21.6 bits), Expect = 7.9e-08, Sum P(3) = 7.9e-08
Identities = 20/92 (21%), Positives = 31/92 (33%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I +F L++
Sbjct: 777 PGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRL 836
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ + F ++T+L L I N L
Sbjct: 837 LSLHGNDISTLQEGIFADVTSLSHLAIGANPL 868
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 5 LIFMSK--LKSLDLSYNDIVEINPEIFKDIQD 34
L+F + L LDLS N I I + F+ D
Sbjct: 127 LLFQNNQALSRLDLSENAIQAIPRKAFRGATD 158
>UNIPROTKB|F1NEL3 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0030539 "male genitalia development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0050673 "epithelial cell proliferation"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0072202 "cell differentiation involved in metanephros
development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0045892
GO:GO:0045893 InterPro:IPR003591 SMART:SM00369 GO:GO:0090190
GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 GeneTree:ENSGT00650000092962 OMA:DGYWSDC
EMBL:AADN02040116 EMBL:AADN02040117 EMBL:AADN02040118
EMBL:AADN02040119 IPI:IPI00595681 ProteinModelPortal:F1NEL3
Ensembl:ENSGALT00000019904 Uniprot:F1NEL3
Length = 1038
Score = 210 (79.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 96/393 (24%), Positives = 160/393 (40%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IF 113
CP C C DRG + C +A +P G + T+ L + + N++T P F
Sbjct: 112 CPASCSCD-GDRG---VDCSGRGLA-AVPPG-LSAFTQALDV-----SMNNITRLPEDAF 160
Query: 114 QQFQHLEELHITNSFIPAIGFHP--FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+ F +LEEL + + + I HP G+ L+ L L +N + ++ + +G+ LQ L
Sbjct: 161 KNFPYLEELRLAGNDLSFI--HPKALSGLKELKVLTLQNNQLKTVPNEAIRGLSGLQSLR 218
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
LD N I ++P F L LR L L N ++++ N I I
Sbjct: 219 LDANHITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPLSNLPSLQALTLALNKITHIPDY 278
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F ++ L + ++ I + L +L LDL YN
Sbjct: 279 AFTNLSSLVVLHLHNNKIKTIGKHCFDGLDNLETLDLNYNNMVEFPEAIKALPNLKELAF 338
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N+ +I + +F+ L+++ L N L+ V +AF NL++L L I + V
Sbjct: 339 HS-NYISIIPDGAFAGNPLLRMIHLYDNPLSFVGNSAFQNLSDLHSLVIRGASM----VQ 393
Query: 352 SFDPIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
F + + L L ++G I ++ N D+P F L
Sbjct: 394 RFPNLTGTVNLESLTLTGTKINSIPVNLCQEQKMLRTLD-LSYNNIKDLPS--FTGCRSL 450
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+ ++L N + +I + +Q L LDLSRN+
Sbjct: 451 EEISLQHNQIHEITDDTFQGLSSLRILDLSRNR 483
Score = 183 (69.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 64/257 (24%), Positives = 104/257 (40%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F L LH+ N+ I IG H F G+ +L L+L +NN+ + K + NL+EL
Sbjct: 280 FTNLSSLVVLHLHNNKIKTIGKHCFDGLDNLETLDLNYNNMVEFPEA-IKALPNLKELAF 338
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N I IP F LR++ L N +S + +V+ P +
Sbjct: 339 HSNYISIIPDGAFAGNPLLRMIHLYDNPLSFVGNSAFQNLSDLHSLVIRGASMVQRFPNL 398
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
+ L++ + +I + L LDL YN
Sbjct: 399 TGTVN-LESLTLTGTKINSIPVNLCQEQKMLRTLDLSYNNIKDLPSFTGCRSLEEISLQH 457
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N I + +F L++L L RNR+ K+ AFT + ++ LD+S+N+L +
Sbjct: 458 --NQIHEITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGAIVNLDLSFNELTSVPTEG 515
Query: 353 FDPIENSLRDLKISGNN 369
+ L LK++GN+
Sbjct: 516 L----SGLNQLKLAGNS 528
Score = 155 (59.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 61/233 (26%), Positives = 105/233 (45%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDR 67
+ L++LDL+YN++VE PE K + + L + ++ ++ A P + L D
Sbjct: 307 LDNLETLDLNYNNMVEF-PEAIKALPNLKELAFHSNYISIIPDGAFAGNPLLRMIHLYDN 365
Query: 68 GRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNS 127
+ G+ A DL + V++ + +LT G + +LE L +T +
Sbjct: 366 PLSFV----GNSAFQ---NLSDLHSLVIRGASMVQRFPNLT-GTV-----NLESLTLTGT 412
Query: 128 FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMH 187
I +I + LR L+L++NNI L +F G +L+E+ L N+I I F
Sbjct: 413 KINSIPVNLCQEQKMLRTLDLSYNNIKDLP--SFTGCRSLEEISLQHNQIHEITDDTFQG 470
Query: 188 LSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
LS LR+L L+ NRI K+ +N++ + E + +LK
Sbjct: 471 LSSLRILDLSRNRICKIHKEAFTTIGAIVNLDLSFNELTSVPTEGLSGLNQLK 523
Score = 148 (57.2 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 70/329 (21%), Positives = 126/329 (38%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
+ L+ L + N+ + + G+ L+ L L N+IT++ +F+G++ L+ L+LD N
Sbjct: 188 KELKVLTLQNNQLKTVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNS 247
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ +P +L L+ L+LA N+I+ + N I I F +
Sbjct: 248 LTEVPIHPLSNLPSLQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGL 307
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L+T + P L +L L N N
Sbjct: 308 DNLETLDLNYNNMVEF-PEAIKALPNLKELAFHSNYISIIPDGAFAGNPLLRMIHLYDNP 366
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLT---NLIELDISYNKLDRLEVASF 353
+ +F + L L ++ + + F NLT NL L ++ K++ + V +
Sbjct: 367 LSFVGNSAFQNLSDLHSLVIRGASMVQ----RFPNLTGTVNLESLTLTGTKINSIPV-NL 421
Query: 354 DPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLN 413
+ LR L +S NNI+ + +I F+ L+ L+
Sbjct: 422 CQEQKMLRTLDLSYNNIKDLPSFTGCRSLEEIS---LQHNQIHEITDDTFQGLSSLRILD 478
Query: 414 LSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
LS N + IH + + + +LDLS N+
Sbjct: 479 LSRNRICKIHKEAFTTIGAIVNLDLSFNE 507
Score = 136 (52.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 50/192 (26%), Positives = 87/192 (45%)
Query: 12 KSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYE 71
++LD+S N+I + + FK+ F L L + S + P AL +
Sbjct: 143 QALDVSMNNITRLPEDAFKN-------FPYLEELRLAGNDLSFIHPK----ALSGLKELK 191
Query: 72 IVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQHLEELHITNSFI 129
++ + + +P + G L+ + + N H+T P F+ L L + ++ +
Sbjct: 192 VLTLQNNQLKTVP-NEAIRGLSGLQSLRLDAN--HITAVPKDSFEGLVQLRHLWLDDNSL 248
Query: 130 PAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLS 189
+ HP +PSL+ L L N IT + DY F + +L L+L NKI++I F L
Sbjct: 249 TEVPIHPLSNLPSLQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGLD 308
Query: 190 DLRVLSLAHNRI 201
+L L L +N +
Sbjct: 309 NLETLDLNYNNM 320
>UNIPROTKB|F1MT22 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048839 "inner ear development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:DAAA02012288 EMBL:DAAA02012284 EMBL:DAAA02012285
EMBL:DAAA02012286 EMBL:DAAA02012287 IPI:IPI00688410
UniGene:Bt.94743 ProteinModelPortal:F1MT22
Ensembl:ENSBTAT00000017631 NextBio:20873048 Uniprot:F1MT22
Length = 907
Score = 209 (78.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 92/402 (22%), Positives = 156/402 (38%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMA-NPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQ 114
CP C+C D R + C D+ + +P + + T L + S N + L P+
Sbjct: 34 CPAHCQCEPDGRMLLRVDC--SDLGLSELP-SNLSVFTSYLDL--SMNNISQLPPSPL-H 87
Query: 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
+ LEEL + + + I F G+ SL+ L L +N++ + + + +LQ L LD
Sbjct: 88 SLRFLEELRLAGNALTYIPKGAFAGLYSLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDA 147
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
N+I S+P S F L LR L L N ++++ + N I I F
Sbjct: 148 NRISSVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFG 207
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
++ L + + ++ + L L LDL YN
Sbjct: 208 NLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAVRTLSNLKELGFHS- 266
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N+ I EK+F L + N + V +AF +L L L ++ ++ F
Sbjct: 267 NNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTLN----GASQITEFP 322
Query: 355 PIEN--SLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT---DIPKGLFKMNPHL 409
+ SL L ++G I + D++Y D+P F + L
Sbjct: 323 DLTGTASLESLTLTGAQISSLPQTVCDQLPNLQ----VLDLSYNLLEDLPS--FSVCQKL 376
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
Q ++L N + +I +Q L L+L+ NK D ++
Sbjct: 377 QKIDLRHNEIYEIQADTFQQLFSLRSLNLAWNKIAIIDPNAF 418
Score = 153 (58.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 65/259 (25%), Positives = 105/259 (40%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F L LH+ N+ I ++G F G+ SL L+L +NN+ + + NL+EL
Sbjct: 206 FGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEF-PTAVRTLSNLKELGF 264
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXX--XXXXXXXXYNDIVEINP 230
N I+SIP F+ L + N I +L R + I E P
Sbjct: 265 HSNNIKSIPEKAFVGNPSLITIHFYDNPI-QLVGRSAFQHLPELRTLTLNGASQITEF-P 322
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
++ L++ + ++ + L +L LDL YN
Sbjct: 323 DL-TGTASLESLTLTGAQISSLPQTVCDQLPNLQVLDLSYNLLEDLPSFSVCQKLQKIDL 381
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
N I +F F L+ L L N++A + AF+ L +L +LD+S N+L + V
Sbjct: 382 RH--NEIYEIQADTFQQLFSLRSLNLAWNKIAIIDPNAFSTLPSLRKLDLSSNRLSSIPV 439
Query: 351 ASFDPIENSLRDLKISGNN 369
+ L LK++GN+
Sbjct: 440 TGL----HGLTHLKLTGNH 454
Score = 121 (47.7 bits), Expect = 0.00069, P = 0.00069
Identities = 50/216 (23%), Positives = 77/216 (35%)
Query: 244 CRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEK 303
C GL + P S+ YLDL N GN I +
Sbjct: 52 CSDLGLSEL-PSNLSVFTS--YLDLSMNNISQLPPSPLHSLRFLEELRLAGNALTYIPKG 108
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
+F+ + L+VL L+ N L +V T A NL +L L + N++ + + F + +SLR L
Sbjct: 109 AFAGLYSLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDANRISSVPPSCFSGL-HSLRHL 167
Query: 364 KISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIH 423
+ N + +A IP F L L+L N + +
Sbjct: 168 WLDDNAL-TEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLG 226
Query: 424 NLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNI 459
+ L LDL+ N F +S K +
Sbjct: 227 KKCFDGLHSLETLDLNYNNLDEFPTAVRTLSNLKEL 262
>FB|FBgn0259677 [details] [associations]
symbol:CG42346 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082
RefSeq:NP_001036306.2 UniGene:Dm.23593 ProteinModelPortal:Q0KHN6
SMR:Q0KHN6 GeneID:3355160 KEGG:dme:Dmel_CG42346 FlyBase:FBgn0259677
InParanoid:Q0KHN6 OMA:RHFSIPN OrthoDB:EOG40ZPCD PhylomeDB:Q0KHN6
GenomeRNAi:3355160 NextBio:850922 Bgee:Q0KHN6 Uniprot:Q0KHN6
Length = 1639
Score = 209 (78.6 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 103/458 (22%), Positives = 178/458 (38%)
Query: 16 LSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCR 75
L N I I+P +F + + L+ + F+ LL + + +LD+ EI
Sbjct: 408 LESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNN---EI--- 461
Query: 76 RGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFH 135
+ IG M E L+ V N +F+ L+ELHI + I I
Sbjct: 462 -----QDLEIG-MFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQ 515
Query: 136 PFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLS 195
F + +++++NL N +T L D +L + L+ N + + F ++++
Sbjct: 516 AFHTLENMQHINLQDNQLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMW 575
Query: 196 LAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPM 255
L N+++++ N I +I + F ++ L+ L +
Sbjct: 576 LKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRD 635
Query: 256 MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
++ L DL L L N N + FS++F L L
Sbjct: 636 YFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLN 695
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L L K+ AF +LTNL EL++ N+L+ ++ + D I N LR L +S NN
Sbjct: 696 LGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTLD-IPN-LRRLLLSHNNFSYAGS 753
Query: 376 XXXXXXXXXXXXX----XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNI 431
+++ + IP LF N +L L+L N L I+ ++
Sbjct: 754 VGIMAGMLDRLRSLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLCDNRLTQINRNIFSGLN 813
Query: 432 KLTHLDLSRNKFKGFDEKS-YIMSEPKNIHKAAKNSFA 468
L L RN+ F + Y +S +++ A+N A
Sbjct: 814 VFKELRLCRNELSDFPHIALYNLSTLESLD-LARNQLA 850
Score = 193 (73.0 bits), Expect = 9.7e-12, Sum P(2) = 9.7e-12
Identities = 98/441 (22%), Positives = 177/441 (40%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMC--PYMCECALD 65
+ +L SLD+S+N I+ ++P++F + L V + +H+ V P + E L
Sbjct: 329 LRELMSLDMSHNRIIGLDPKVF---EKNKRLQTVDLSHNHIHTIGGVFSNLPQLREVFLS 385
Query: 66 DRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHIT 125
+ E+ N + + L + + + +PN +F +L+ L++
Sbjct: 386 ENNILELPADA--FTNSTNVDVIYLESNAIAHI----DPN------VFSTLVNLDHLYLR 433
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
++FIP + F L L+L +N I L F+ + +L+E+ L N+I + VF
Sbjct: 434 SNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVF 493
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE-LKTFKC 244
L L+ L + N I + P+ N + + +IF D L + +
Sbjct: 494 EPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLE-DIFPDENSSLLSVQL 552
Query: 245 RSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKS 304
+ L ++P +S + + L NQ N I + +
Sbjct: 553 EANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDT 612
Query: 305 FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLK 364
F + LQ L L N+L ++ F L +L EL ++ N ++ +E +F ++N L+ L
Sbjct: 613 FVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKN-LKSLD 671
Query: 365 ISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQ--DI 422
+S N + + + + + + FK +L LNL N L DI
Sbjct: 672 LSHNPL-VQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADI 730
Query: 423 HNLLYQSNIKLTHLDLSRNKF 443
L + L L LS N F
Sbjct: 731 QTLDIPN---LRRLLLSHNNF 748
Score = 191 (72.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 80/338 (23%), Positives = 128/338 (37%)
Query: 109 IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNL 167
IGP F+ F L+ L + I + F + L L+++HN I L F+ L
Sbjct: 297 IGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRL 356
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
Q + L N I +I VF +L LR + L+ N I +L N I
Sbjct: 357 QTVDLSHNHIHTI-GGVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAH 415
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXX 287
I+P +F + L RS + + ++ L L L N+
Sbjct: 416 IDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHL 475
Query: 288 XXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDR 347
N + F LQ L +++N + + AF L N+ +++ N+L
Sbjct: 476 REVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTV 535
Query: 348 LEVASFDPIENS-LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMN 406
LE P ENS L +++ N + + D T + + F
Sbjct: 536 LE--DIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMW-LKDNQLTRVERSFFADT 592
Query: 407 PHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
P L L LS N ++DI + + + L LDLS N+ +
Sbjct: 593 PQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLR 630
Score = 188 (71.2 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 71/351 (20%), Positives = 139/351 (39%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN-LQELYLDFN 175
Q L L + I + + F+G+ + LN+ N + + ++ F G+ +QE+ + N
Sbjct: 171 QKLTALDFDYNEIVRVDDYSFYGL-RISKLNMKGNRLQGMPEHAFAGLEECMQEIDVSEN 229
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRIS------KLAPRXXXXXXXXXXXXX--------- 220
+ + P L LR+L L++NRI +LA
Sbjct: 230 GLRTFPLMALRKLDHLRILRLSNNRIPTFYGDIQLATNNASAAAAAVGAFQLPSLIFLDL 289
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXX 280
N EI P+ F+ +LKT + +E + P + L +L+ LD+ +N+
Sbjct: 290 SSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKV 349
Query: 281 XXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340
NH I FS+ +L+ + L N + ++ AFTN TN+ + +
Sbjct: 350 FEKNKRLQTVDLSHNHIHTI-GGVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYL 408
Query: 341 SYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPK 400
N + ++ F + N L L + N I + + D+
Sbjct: 409 ESNAIAHIDPNVFSTLVN-LDHLYLRSNFIPLLPVTLFDKSTKLTSLS-LDNNEIQDLEI 466
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
G+F+ HL+ + L N ++ + +++ L L + +N + + +++
Sbjct: 467 GMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAF 517
Score = 172 (65.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 69/338 (20%), Positives = 127/338 (37%)
Query: 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
Q L L ++++ IG F P L+ L+ N I + FK + L L +
Sbjct: 280 QLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSH 339
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
N+I + VF L+ + L+HN I + N+I+E+ + F
Sbjct: 340 NRIIGLDPKVFEKNKRLQTVDLSHNHIHTIGG-VFSNLPQLREVFLSENNILELPADAFT 398
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
+ + S + +I+P ++S L +L +L L N
Sbjct: 399 NSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDN 458
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + F L+ + L NR+ +V F L +L EL I N ++ +E +F
Sbjct: 459 NEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFH 518
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+EN ++ + + N + A+ + P+ F +Q + L
Sbjct: 519 TLEN-MQHINLQDNQLTVLEDIFPDENSSLLSVQLEANYLHKVHPR-TFSRQQKVQIMWL 576
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI 452
N L + + +L L LS NK + ++ +++
Sbjct: 577 KDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFV 614
Score = 169 (64.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 73/321 (22%), Positives = 125/321 (38%)
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
+PSL +L+L+ N + F+ L+ L N+IE + F L +L L ++HN
Sbjct: 281 LPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHN 340
Query: 200 RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK-TFKCRSCGLE-NINPMMY 257
RI L P+ +N I I +F ++ +L+ F + LE +
Sbjct: 341 RIIGLDPKVFEKNKRLQTVDLSHNHIHTIGG-VFSNLPQLREVFLSENNILELPADAFTN 399
Query: 258 SILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLK 317
S D+IYL+ N N P++ F KL L L
Sbjct: 400 STNVDVIYLES--NAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLD 457
Query: 318 RNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXX 377
N + + F L +L E+ + N++ R+ F+P+ SL++L I N+I+
Sbjct: 458 NNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLP-SLQELHIQKNSIEDIEPQA 516
Query: 378 XXXXXXXXXXXXIADMNYTDIPKGLFK-MNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHL 436
+ D N + + +F N L + L N L +H + K+ +
Sbjct: 517 FHTLENMQHIN-LQD-NQLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIM 574
Query: 437 DLSRNKFKGFDEKSYIMSEPK 457
L N+ E+S+ P+
Sbjct: 575 WLKDNQLTRV-ERSFFADTPQ 594
Score = 158 (60.7 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 79/365 (21%), Positives = 144/365 (39%)
Query: 80 ANPIPIGQMDLGTEVLKIVPSEENPNHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPF 137
AN I + Q + + +++ + + N + + P +F++ + L+ + ++++ I IG F
Sbjct: 315 ANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTIG-GVF 373
Query: 138 WGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
+P LR + L+ NNI L F N+ +YL+ N I I +VF L +L L L
Sbjct: 374 SNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLR 433
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
N I L N+I ++ +F+ ++ L+ + + + + ++
Sbjct: 434 SNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVF 493
Query: 258 SILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ-FKLQVLCL 316
L L L + N N V LE F + L + L
Sbjct: 494 EPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTV-LEDIFPDENSSLLSVQL 552
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXX 376
+ N L KV F+ + + + N+L R+E SF L L +S N I+
Sbjct: 553 EANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVE-RSFFADTPQLGRLYLSDNKIRDIEKD 611
Query: 377 XXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHL 436
++ + + F L+ L+L+ N+++ I + L L
Sbjct: 612 TFVNLLLLQFLD-LSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSL 670
Query: 437 DLSRN 441
DLS N
Sbjct: 671 DLSHN 675
Score = 147 (56.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 92/464 (19%), Positives = 178/464 (38%)
Query: 4 TLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECA 63
T + + L+ LDLS N + ++ + F +QD L + + A +
Sbjct: 612 TFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLD 671
Query: 64 LDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELH 123
L ++ R +N P+ ++LG L+ + E++ F+ +L EL+
Sbjct: 672 LSHNPLVQLT--RDIFSNEFPLNSLNLGNCSLRKL--EQHA--------FKSLTNLNELN 719
Query: 124 ITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK-GMMN----LQELYLDFNKIE 178
+ + + +P+LR L L+HNN + GM++ LQ+L + +
Sbjct: 720 LERNQLNPADIQTL-DIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLG 778
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI-FKDIQ 237
IP +F ++L L L NR++++ N++ + P I ++
Sbjct: 779 QIPDLLFAKNTNLVRLDLCDNRLTQINRNIFSGLNVFKELRLCRNELSDF-PHIALYNLS 837
Query: 238 ELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHF 297
L++ L +I+ S +L L L N+ GN
Sbjct: 838 TLESLDLARNQLASIDFFKLSGTLNLRQLILRDNKITALSGFNAVNLTQLDSVDLSGNLL 897
Query: 298 PVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLT--NLIELDISYNKLDRLEVASFDP 355
+ LQ + L NR ++ ++A ++++ L L+++ N ++R+ +
Sbjct: 898 LSLPANFLRHSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEER 957
Query: 356 IENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLS 415
L++L I N+ + + T I G FK +L L+LS
Sbjct: 958 YPY-LKELYICQTNLSILTSKDFEAFQALQHLHLVNN-RITRISPGAFKSLTNLLTLDLS 1015
Query: 416 GNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNI 459
N L+ + Q L L++S N K +E S + E + +
Sbjct: 1016 VNELEMLPKERLQGLRLLRFLNISHNTLKDLEEFSVDLLEMQTL 1059
Score = 146 (56.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 73/367 (19%), Positives = 146/367 (39%)
Query: 95 LKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHP--FWGVPSLRYLNLTHNN 152
LK + N L F+ + L L ++++ I IG P F L+ ++L+HN+
Sbjct: 308 LKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRI--IGLDPKVFEKNKRLQTVDLSHNH 365
Query: 153 ITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXX 212
I ++ F + L+E++L N I +P+ F + +++ V+ L N I+ + P
Sbjct: 366 IHTIGGV-FSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTL 424
Query: 213 XXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
N I + +F +L + + ++++ M+ L L + L N+
Sbjct: 425 VNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNR 484
Query: 273 XXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNL 332
N I ++F + +Q + L+ N+L +
Sbjct: 485 IRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDEN 544
Query: 333 TNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIAD 392
++L+ + + N L ++ +F + ++ + + N + ++D
Sbjct: 545 SSLLSVQLEANYLHKVHPRTFSR-QQKVQIMWLKDNQL-TRVERSFFADTPQLGRLYLSD 602
Query: 393 MNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI 452
DI K F LQFL+LSGN L+ + + L L L+RN + + Y
Sbjct: 603 NKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIE--GYA 660
Query: 453 MSEPKNI 459
++ KN+
Sbjct: 661 FAKLKNL 667
Score = 143 (55.4 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 68/330 (20%), Positives = 123/330 (37%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
LE L I N + + + L L+ +N I + DY+F G+ + +L + N+++
Sbjct: 149 LESLSIVNGKLTQMPSRALSSMQKLTALDFDYNEIVRVDDYSFYGL-RISKLNMKGNRLQ 207
Query: 179 SIPSSVFMHLSD-LRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQ 237
+P F L + ++ + ++ N + + P N+ + P + DIQ
Sbjct: 208 GMPEHAFAGLEECMQEIDVSENGL-RTFPLMALRKLDHLRILRLSNNRI---PTFYGDIQ 263
Query: 238 ELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHF 297
L T S + L LI+LDL NQ N
Sbjct: 264 -LATNNA-SAAAAAVGAFQ---LPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQI 318
Query: 298 PVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
++ ++F S +L L + NR+ + F L +D+S+N + + F +
Sbjct: 319 ELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTIG-GVFSNLP 377
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
LR++ +S NNI + I +F +L L L N
Sbjct: 378 Q-LREVFLSENNI-LELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSN 435
Query: 418 NLQDIHNLLYQSNIKLTHLDLSRNKFKGFD 447
+ + L+ + KLT L L N+ + +
Sbjct: 436 FIPLLPVTLFDKSTKLTSLSLDNNEIQDLE 465
Score = 135 (52.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 56/257 (21%), Positives = 106/257 (41%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
LE L + + + +I F G +LR L L N IT+L +N + L + L N +
Sbjct: 839 LESLDLARNQLASIDFFKLSGTLNLRQLILRDNKITALSGFNAVNLTQLDSVDLSGNLLL 898
Query: 179 SIPSSVFMHLSDLRVLSLAHNRI-----SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
S+P++ H +L+ + L++NR S L+ N I + E +
Sbjct: 899 SLPANFLRHSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERY 958
Query: 234 KDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXX 293
++EL + C++ L + + L +L L N+
Sbjct: 959 PYLKEL--YICQT-NLSILTSKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLS 1015
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
N ++ ++ L+ L + N L + + +L + LD+S+N+LDR+ +F
Sbjct: 1016 VNELEMLPKERLQGLRLLRFLNISHNTLKDLEEFS-VDLLEMQTLDLSFNQLDRISKKTF 1074
Query: 354 DPIENSLRDLKISGNNI 370
+ + L +L + GN +
Sbjct: 1075 RNL-HGLLELFLMGNRM 1090
Score = 126 (49.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 37/158 (23%), Positives = 71/158 (44%)
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
+++ +L+EL+I + + + F +L++L+L +N IT + FK + NL L L
Sbjct: 956 ERYPYLKELYICQTNLSILTSKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLS 1015
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E +P L LR L+++HN + L +N + I+ + F
Sbjct: 1016 VNELEMLPKERLQGLRLLRFLNISHNTLKDLE-EFSVDLLEMQTLDLSFNQLDRISKKTF 1074
Query: 234 KDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
+++ L + ++ + L L LDL N
Sbjct: 1075 RNLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLDLRKN 1112
Score = 124 (48.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 44/147 (29%), Positives = 68/147 (46%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
++ K F + LQ L L NR+ +++ AF +LTNL+ LD+S N+L+ L +
Sbjct: 973 ILTSKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLR- 1031
Query: 359 SLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPH-LQFLNLSGN 417
LR L IS N ++ ++ I K F+ N H L L L GN
Sbjct: 1032 LLRFLNISHNTLKDLEEFSVDLLEMQTLDLSFNQLDR--ISKKTFR-NLHGLLELFLMGN 1088
Query: 418 NLQDIHNLLYQSNIKLTHLDLSRNKFK 444
+ + N ++ KL LDL +N F+
Sbjct: 1089 RMTVLSNDAFRFLRKLHVLDLRKNYFE 1115
Score = 72 (30.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 22/91 (24%), Positives = 41/91 (45%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGV-PSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
+FQ H+ L ++S + A+ + V SL L++ + +T + M L L
Sbjct: 117 VFQPGVHIRHLQFSHSHLEALKDNSLRNVRSSLESLSIVNGKLTQMPSRALSSMQKLTAL 176
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
D+N+I + F L + L++ NR+
Sbjct: 177 DFDYNEIVRVDDYSFYGLR-ISKLNMKGNRL 206
Score = 52 (23.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 8 MSKLKSLDLSYNDIVEINPEIF 29
M KL +LD YN+IV ++ F
Sbjct: 170 MQKLTALDFDYNEIVRVDDYSF 191
Score = 47 (21.6 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 14 LDLSYNDIVEINPEIFK 30
LDLS N EI P+ F+
Sbjct: 287 LDLSSNQFAEIGPDCFR 303
Score = 47 (21.6 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+LK+L N I + PE FK +++ L
Sbjct: 307 QLKTLSFYANQIELVQPEAFKSLRELMSL 335
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 142 (55.0 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 48/156 (30%), Positives = 75/156 (48%)
Query: 51 SASVM-CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S SV+ CP C C+ + IV RG IP + TE+ ++ E+N +
Sbjct: 74 SCSVLHCPAACTCSNN------IVDCRGKGLTEIPTNLPETITEI-RL---EQNSIKVIP 123
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F ++ L + ++N+ I + F G+ SL L L N IT L F+G+ +LQ
Sbjct: 124 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQL 183
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L+ NKI + F L +L +LSL N++ +A
Sbjct: 184 LLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 219
Score = 130 (50.8 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 36/128 (28%), Positives = 57/128 (44%)
Query: 117 QHLEELHITNS---FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ EL + N+ + A G F +P LR +N ++N IT + + F+G + E+ L
Sbjct: 340 QYTAELRLNNNEFTVLEATGI--FKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLT 397
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E++ +F L L+ L L NRIS + N I I P F
Sbjct: 398 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAF 457
Query: 234 KDIQELKT 241
+ L T
Sbjct: 458 DTLHSLST 465
Score = 130 (50.8 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 44/155 (28%), Positives = 75/155 (48%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A + CP C C G + C + IP + T L++ +E T G
Sbjct: 309 ADLACPEKCRC----EGT-TVDCSNQKLTK-IP-DHIPQYTAELRLNNNEFTVLEAT-G- 359
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF++ L +++ +N+ I I F G + + LT N + ++ FKG+ +L+ L
Sbjct: 360 IFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLM 419
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L N+I + + F+ LS +R+LSL N+I+ +AP
Sbjct: 420 LRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAP 454
Score = 121 (47.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 26/77 (33%), Positives = 51/77 (66%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNHF ++ ++ ++ + L ++ L NR++ ++ +F+N+T L+ L +SYN+L + +F
Sbjct: 570 GNHFTLVPKELYNYKH-LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 628
Query: 354 DPIENSLRDLKISGNNI 370
D ++ SLR L + GN+I
Sbjct: 629 DGLK-SLRLLSLHGNDI 644
Score = 86 (35.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+ IP F LR + L++N+IS+LAP N I
Sbjct: 109 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 168
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
E+ +F+ + L+ + IN + DL L+L
Sbjct: 169 ELPKSLFEGLFSLQLLLLNA---NKINCLRVDAFQDLHNLNL 207
Score = 77 (32.2 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + E+ +T++ + + F G+ SL+ L L N I+ + + +F G+ +++ L L
Sbjct: 385 FEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSL 444
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHN 199
N+I +I F L L L+L N
Sbjct: 445 YDNQIATIAPGAFDTLHSLSTLNLLAN 471
Score = 72 (30.4 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+ + ++ +F L LR ++ ++N+I+ + N +
Sbjct: 344 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLEN 403
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
+ ++FK ++ LKT RS + + + L+ + L L NQ
Sbjct: 404 VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 448
Score = 68 (29.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 394 NYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
++T +PK L+ HL ++LS N + + N + + +L L LS N+ + +++
Sbjct: 572 HFTLVPKELYNYK-HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 628
Score = 68 (29.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + K F L+ L L+ NR++ V +F L+++ L + N++ + +FD
Sbjct: 399 NRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFD 458
Query: 355 PIENSLRDLKISGN 368
+ +SL L + N
Sbjct: 459 TL-HSLSTLNLLAN 471
Score = 68 (29.0 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK--------FKGFDEKSYI 452
G+FK P L+ +N S N + DI ++ + + L+ N+ FKG + +
Sbjct: 359 GIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTL 418
Query: 453 MSEPKNIHKAAKNSFALQSSM 473
M I +SF SS+
Sbjct: 419 MLRSNRISCVGNDSFIGLSSV 439
Score = 65 (27.9 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + +SFS+ +L L L NRL + F L +L L + N + + +F
Sbjct: 594 NRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFS 653
Query: 355 PIENSLRDLKISGN 368
+ ++L L I N
Sbjct: 654 DL-SALSHLAIGAN 666
Score = 63 (27.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 27/126 (21%), Positives = 45/126 (35%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N+I + F L+ + L N+I + F L L L L N+I++L
Sbjct: 112 IRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP 171
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I + + F+D+ L L+ I +S L +
Sbjct: 172 KSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQT 231
Query: 266 LDLGYN 271
+ L N
Sbjct: 232 MHLAQN 237
Score = 57 (25.1 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 25/124 (20%), Positives = 44/124 (35%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L L +N T L FK + L+++ NKI I F + + + L NR+ +
Sbjct: 345 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENV 404
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
+ N I + + F + ++ + I P + L L
Sbjct: 405 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLS 464
Query: 265 YLDL 268
L+L
Sbjct: 465 TLNL 468
Score = 56 (24.8 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I E+ P+ F+ ++ L
Sbjct: 132 KLRRIDLSNNQISELAPDAFQGLRSLNSL 160
Score = 55 (24.4 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 20/83 (24%), Positives = 31/83 (37%)
Query: 263 LIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLA 322
L +DL N+ N I ++F L++L L N ++
Sbjct: 586 LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 645
Query: 323 KVTTTAFTNLTNLIELDISYNKL 345
V AF++L+ L L I N L
Sbjct: 646 VVPEGAFSDLSALSHLAIGANPL 668
Score = 50 (22.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N I E +F + + L NRL V F L +L L + N++ + SF
Sbjct: 375 NKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFI 434
Query: 355 PIENSLRDLKISGNNI 370
+ +S+R L + N I
Sbjct: 435 GL-SSVRLLSLYDNQI 449
Score = 47 (21.6 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N + T F L L +++ S NK+ +E +F+ + ++ ++ N ++
Sbjct: 345 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAG-VNEILLTSNRLE 402
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 16/73 (21%), Positives = 26/73 (35%)
Query: 249 LENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
+ ++ +S + L+ L L YN+ GN V+ E +FS
Sbjct: 596 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDL 655
Query: 309 FKLQVLCLKRNRL 321
L L + N L
Sbjct: 656 SALSHLAIGANPL 668
Score = 44 (20.5 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L+L GN++ + + L+HL + N
Sbjct: 623 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGAN 666
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 145 (56.1 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q EL + N S + A G F + L+ +NL++N ++ + D F+G ++ EL+L
Sbjct: 540 QSTTELRLNNNEISILEATGL--FKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLT 597
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++ESI S +F L LR L L +NRIS + N I I+P F
Sbjct: 598 ANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAF 657
Query: 234 KDIQELKT 241
+Q L T
Sbjct: 658 DTLQALST 665
Score = 145 (56.1 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 46/163 (28%), Positives = 85/163 (52%)
Query: 46 YLLHS--SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEEN 103
Y L+S ++ V CP+ C C + C ++ IP ++ T L++ +E +
Sbjct: 501 YHLNSECTSDVACPHKCRCEAS-----VVECSSLKLSK-IP-ERIPQSTTELRLNNNEIS 553
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
T G +F++ HL++++++N+ + I F G S+ L+LT N + S+ F+G
Sbjct: 554 ILEAT-G-LFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRG 611
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ L+ L L N+I I + F L ++R+LSL N I+ ++P
Sbjct: 612 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP 654
Score = 143 (55.4 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 54/155 (34%), Positives = 73/155 (47%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
+S CP MC C+ G IV RG IP + TE+ ++ E N +I P
Sbjct: 278 SSGSCPAMCSCS---SG---IVDCRGKGLTAIPANLPETMTEI-RL---ELN-GIKSIPP 326
Query: 112 -IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
F ++ L + ++N+ I I F G+ SL L L N IT L F G+ LQ L
Sbjct: 327 GAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL 386
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+ NKI I F L +L +LSL N+I LA
Sbjct: 387 LLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Score = 130 (50.8 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L + P +FQ Q L L ++ +F+ A+ F G L+ L L N I+ + +
Sbjct: 117 NRNQLQVLPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGA 176
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + L+ L L+ N I +IP S F H+ LR L N +
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 111 (44.1 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 50/193 (25%), Positives = 77/193 (39%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLT-IGPI-F 113
CP +C C G + C G IP + TE L++ N N++T I F
Sbjct: 34 CPALCTCT----GT-TVDCH-GTGLQAIP-KNIPRNTERLEL-----NGNNITRIHKNDF 81
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
+ L L + + I A+ F + L L L N + L + F+ L L L
Sbjct: 82 AGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLS 141
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N ++++P F +DL+ L L NRIS + N+I I F
Sbjct: 142 ENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSF 201
Query: 234 KDIQELKTFKCRS 246
+ +L+TF+ S
Sbjct: 202 NHMPKLRTFRLHS 214
Score = 104 (41.7 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 294 GNHFPVILEKSFSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN F ++ + S FK LQ++ L N+++ ++ ++FTN++ L L +SYN L + +
Sbjct: 770 GNQFTLVPGQL--STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLA 827
Query: 353 FDPIENSLRDLKISGNNI 370
F + SLR L + GN++
Sbjct: 828 FQGLR-SLRLLSLHGNDV 844
Score = 103 (41.3 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 129 IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
IP F P+ LR ++L++N I + F+G+ +L L L NKI +P VF L
Sbjct: 324 IPPGAFSPY---RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
L++L L N+I+ + P N I + F ++ ++T
Sbjct: 381 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Score = 97 (39.2 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + ELH+T + + +I F G+ LR L L +N I+ + + +F G+ N++ L L
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHN 199
N I +I F L L L+L N
Sbjct: 645 YDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 91 (37.1 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 29/121 (23%), Positives = 50/121 (41%)
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
G+++I P +S L +DL NQ GN + F
Sbjct: 320 GIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGG 379
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG 367
+ LQ+L L N++ + AF +L NL L + NK+ L +F + +++ L ++
Sbjct: 380 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR-AIQTLHLAQ 438
Query: 368 N 368
N
Sbjct: 439 N 439
Score = 78 (32.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 35/159 (22%), Positives = 63/159 (39%)
Query: 323 KVTTTAFTNLTN-LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXX 381
K T NL + E+ + N + + +F P LR + +S N I
Sbjct: 298 KGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRK-LRRIDLSNNQIAEIAPDAFQGL 356
Query: 382 XXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ TD+P+G+F LQ L L+ N + I +Q L+ L L N
Sbjct: 357 RSLNSLVLYGN-KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDN 415
Query: 442 KFKGFDEKSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
K + + ++ + + +H A+N F ++ A++
Sbjct: 416 KIQSLAKGTFTSLRAIQTLH-LAQNPFICDCNLKWLADF 453
Score = 73 (30.8 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 22/101 (21%), Positives = 49/101 (48%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+I + ++ +F LS L+ ++L++N++S++ N +
Sbjct: 544 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLES 603
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
I +F+ + L+T R+ + I+ ++ L ++ L L
Sbjct: 604 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Score = 70 (29.7 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
GLFK HL+ +NLS N + +I + ++ ++ L L+ N+ +
Sbjct: 559 GLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLE 602
Score = 70 (29.7 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 23/113 (20%), Positives = 44/113 (38%)
Query: 256 MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
++ L+ L ++L N+ N I F L+ L
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLM 619
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+ NR++ + +FT L N+ L + N + + +FD ++ +L L + N
Sbjct: 620 LRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQ-ALSTLNLLAN 671
Score = 62 (26.9 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF++ +L L L N L + AF L +L L + N + L+ F
Sbjct: 794 NKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFA 853
Query: 355 PIENSLRDLKISGN 368
+ SL L I N
Sbjct: 854 DV-TSLSHLAIGAN 866
Score = 61 (26.5 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 15/59 (25%), Positives = 34/59 (57%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T F L++L ++++S NK+ +E +F+ S+ +L ++ N ++
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAA-SVSELHLTANQLE 602
Score = 61 (26.5 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 28/128 (21%), Positives = 50/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L+ N + + AF+ L +D+S N++ + +F + SL L + GN I
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLR-SLNSLVLYGNKITDLPR 374
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ I F+ +L L+L N +Q + + S +
Sbjct: 375 GVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 434 LHLAQNPF 441
Score = 60 (26.2 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I EI P+ F+ ++ L
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 58 (25.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F+ L L + N+ I I F G+ ++R L+L N+IT++ F + L L
Sbjct: 608 MFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLN 667
Query: 172 L 172
L
Sbjct: 668 L 668
Score = 57 (25.1 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 22/102 (21%), Positives = 39/102 (38%)
Query: 337 ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT 396
EL ++ N++ LE + L+ + +S N + A+
Sbjct: 544 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQ-LE 602
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS--NIKLTHL 436
I G+F+ L+ L L N + IHN + N++L L
Sbjct: 603 SIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Score = 56 (24.8 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+T +P G +LQ ++LS N + + N + + +LT L LS N
Sbjct: 773 FTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYN 818
Score = 55 (24.4 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 23/112 (20%), Positives = 38/112 (33%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+FK + LK + + I + A + L L NQ
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLM 619
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N I SF+ +++L L N + ++ AF L L L++ N
Sbjct: 620 LRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 51 (23.0 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 25/121 (20%), Positives = 41/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + I P + L L L L N+
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 378
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N I +F L +L L N++ + FT+L + L ++
Sbjct: 379 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 438
Query: 343 N 343
N
Sbjct: 439 N 439
Score = 49 (22.3 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F+ L+ L+L GN++ + ++ L+HL + N
Sbjct: 823 IPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGAN 866
Score = 47 (21.6 bits), Expect = 3.7e-12, Sum P(3) = 3.7e-12
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ N I I P+ F+D+Q+ ++L
Sbjct: 383 LQLLLLNANKINCIRPDAFQDLQNLSLL 410
Score = 46 (21.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 20/92 (21%), Positives = 31/92 (33%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I +F L++
Sbjct: 777 PGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRL 836
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ + F ++T+L L I N L
Sbjct: 837 LSLHGNDVSTLQEGIFADVTSLSHLAIGANPL 868
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 144 (55.7 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q EL + N S + A G F + L+ +NL++N ++ + D F+G ++ EL+L
Sbjct: 540 QSTAELRLNNNEISILEATGI--FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT 597
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++ESI S +F L LR L L +NRIS + N I I+P F
Sbjct: 598 ANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAF 657
Query: 234 KDIQELKT 241
+Q L T
Sbjct: 658 DTLQALST 665
Score = 143 (55.4 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 47/163 (28%), Positives = 86/163 (52%)
Query: 46 YLLHS--SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEEN 103
Y L+S ++ +CP+ C C + E C + IP ++ T L++ +E +
Sbjct: 501 YQLNSECNSDAVCPHKCRC---EASLAE--CSSLKLTK-IP-ERIPQSTAELRLNNNEIS 553
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
T G IF++ HL++++++N+ + I F G S+ L+LT N + S+ F+G
Sbjct: 554 ILEAT-G-IFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRG 611
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ L+ L L N+I I + F L ++R+LSL N+I+ ++P
Sbjct: 612 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISP 654
Score = 143 (55.4 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 53/155 (34%), Positives = 73/155 (47%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
+S CP MC C+ G IV RG IP + TE+ ++ E N +I P
Sbjct: 278 SSGSCPAMCSCS---NG---IVDCRGKGLTAIPANLPETMTEI-RL---ELN-GIKSIPP 326
Query: 112 -IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
F ++ L + ++N+ I I F G+ SL L L N IT L F G+ LQ L
Sbjct: 327 GAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL 386
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+ NKI + F L +L +LSL N+I LA
Sbjct: 387 LLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLA 421
Score = 121 (47.7 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 79 MANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHP 136
M N I + + ++ ++ N N L P +FQ Q L L ++ + I AI
Sbjct: 93 MENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENTIQAIPRKA 152
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G L+ L L N I+ + + F+ + L+ L L+ N I +IP S F H+ LR L
Sbjct: 153 FRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Query: 197 AHNRI 201
N +
Sbjct: 213 HSNHL 217
Score = 108 (43.1 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 31/115 (26%), Positives = 55/115 (47%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
+G + L+++ EN + F + LE L + + + + F +L L+L+
Sbjct: 82 VGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLS 141
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
N I ++ F+G +L+ L LD N+I I F L L VL+L +N I+ +
Sbjct: 142 ENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 105 (42.0 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 294 GNHFPVILEKSFSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN F ++ + S FK LQ++ L N+++ ++ ++FTN++ L L +SYN L + +
Sbjct: 770 GNQFTLVPGQL--STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLA 827
Query: 353 FDPIENSLRDLKISGNNI 370
F + SLR L + GN+I
Sbjct: 828 FQGLR-SLRLLSLHGNDI 844
Score = 103 (41.3 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 92 TEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN 151
T + KI S + + G F+ + ELH+T + + +I F G+ LR L L +N
Sbjct: 565 THLKKINLSNNKVSEIEDGA-FEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNN 623
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
I+ + + +F G+ N++ L L N+I +I F L L L+L N
Sbjct: 624 RISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 671
Score = 102 (41.0 bits), Expect = 9.8e-07, Sum P(3) = 9.8e-07
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 129 IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
IP F P+ LR ++L++N I + F+G+ +L L L NKI +P VF L
Sbjct: 324 IPPGAFSPY---RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
L++L L N+I+ + P N I + F ++ ++T
Sbjct: 381 YTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Score = 92 (37.4 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 30/121 (24%), Positives = 50/121 (41%)
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
G+++I P +S L +DL NQ GN + F
Sbjct: 320 GIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGG 379
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG 367
+ LQ+L L N++ V AF +L NL L + NK+ L +F + +++ L ++
Sbjct: 380 LYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR-AIQTLHLAQ 438
Query: 368 N 368
N
Sbjct: 439 N 439
Score = 88 (36.0 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 25/106 (23%), Positives = 47/106 (44%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+SIP F LR + L++N+I+++AP N I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F + L+ + + + P + L +L L L N+
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNK 416
Score = 81 (33.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 33/133 (24%), Positives = 50/133 (37%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P S L L NNIT + +F G+ L+ L L N+I + F + +L L L
Sbjct: 59 IPRSTERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNR 118
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYS 258
N++ L N I I + F+ +LK + + I +
Sbjct: 119 NQLHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFR 178
Query: 259 ILADLIYLDLGYN 271
L L L L N
Sbjct: 179 ALRGLEVLTLNNN 191
Score = 77 (32.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 34/159 (21%), Positives = 63/159 (39%)
Query: 323 KVTTTAFTNLTN-LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXX 381
K T NL + E+ + N + + +F P LR + +S N I
Sbjct: 298 KGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRK-LRRIDLSNNQIAEIAPDAFQGL 356
Query: 382 XXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ TD+P+G+F LQ L L+ N + + +Q L+ L L N
Sbjct: 357 RSLNSLVLYGN-KITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDN 415
Query: 442 KFKGFDEKSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
K + + ++ + + +H A+N F ++ A++
Sbjct: 416 KIQSLAKGTFTSLRAIQTLH-LAQNPFICDCNLKWLADF 453
Score = 77 (32.2 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 23/105 (21%), Positives = 51/105 (48%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+I + ++ +F L+ L+ ++L++N++S++ N +
Sbjct: 544 ELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 603
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
I +F+ + L+T R+ + I+ ++ L ++ L L NQ
Sbjct: 604 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQ 648
Score = 74 (31.1 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 29/126 (23%), Positives = 47/126 (37%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N I S+ F L+ + L N+I I F L L L L N+I+ L
Sbjct: 314 IRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLP 373
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I + P+ F+D+Q L ++++ ++ L +
Sbjct: 374 RGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Query: 266 LDLGYN 271
L L N
Sbjct: 434 LHLAQN 439
Score = 69 (29.3 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 301 LEKSFSSQFK----LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
LE S F+ L+ L L+ NR++ + +FT L N+ L + N++ + +FD +
Sbjct: 601 LESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTL 660
Query: 357 ENSLRDLKISGN 368
+ +L L + N
Sbjct: 661 Q-ALSTLNLLAN 671
Score = 69 (29.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 29/132 (21%), Positives = 54/132 (40%)
Query: 140 VP-SLRYLNLTHNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
+P S L L +N I S+L+ FK + +L+++ L NK+ I F + + L L
Sbjct: 538 IPQSTAELRLNNNEI-SILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHL 596
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
N++ + N I I+ + F ++ ++ + I+P
Sbjct: 597 TANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGA 656
Query: 257 YSILADLIYLDL 268
+ L L L+L
Sbjct: 657 FDTLQALSTLNL 668
Score = 68 (29.0 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
G+FK HL+ +NLS N + +I + ++ ++ L L+ N+ +
Sbjct: 559 GIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLE 602
Score = 65 (27.9 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T F LT+L ++++S NK+ +E +F+ S+ +L ++ N ++
Sbjct: 545 LRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAA-SVSELHLTANQLE 602
Score = 62 (26.9 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 21/74 (28%), Positives = 30/74 (40%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF++ +L L L N L + AF L +L L + N + L F
Sbjct: 794 NKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLREGIFT 853
Query: 355 PIENSLRDLKISGN 368
+ SL L I N
Sbjct: 854 DV-TSLSHLAIGAN 866
Score = 61 (26.5 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 25/112 (22%), Positives = 40/112 (35%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
IFK + LK + + I + A + L L NQ
Sbjct: 560 IFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLM 619
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N I SF+ +++L L N++A ++ AF L L L++ N
Sbjct: 620 LRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 671
Score = 60 (26.2 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I EI P+ F+ ++ L
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Score = 60 (26.2 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 27/128 (21%), Positives = 50/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L+ N + + AF+ L +D+S N++ + +F + SL L + GN I
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLR-SLNSLVLYGNKITDLPR 374
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + F+ +L L+L N +Q + + S +
Sbjct: 375 GVFGGLYTLQLLLLNAN-KINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT 433
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 434 LHLAQNPF 441
Score = 56 (24.8 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+T +P G +LQ ++LS N + + N + + +LT L LS N
Sbjct: 773 FTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYN 818
Score = 56 (24.8 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 22/102 (21%), Positives = 38/102 (37%)
Query: 337 ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT 396
EL ++ N++ LE L+ + +S N + A+
Sbjct: 544 ELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ-LE 602
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS--NIKLTHL 436
I G+F+ L+ L L N + IHN + N++L L
Sbjct: 603 SIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Score = 52 (23.4 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 21/92 (22%), Positives = 32/92 (34%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I +F L++
Sbjct: 777 PGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRL 836
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ + FT++T+L L I N L
Sbjct: 837 LSLHGNDISTLREGIFTDVTSLSHLAIGANPL 868
Score = 50 (22.7 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F+ L+ L+L GN++ + ++ L+HL + N
Sbjct: 823 IPPLAFQGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGAN 866
Score = 50 (22.7 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 24/121 (19%), Positives = 41/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + I P + L L L L N+
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 378
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N++ + FT+L + L ++
Sbjct: 379 GLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 438
Query: 343 N 343
N
Sbjct: 439 N 439
Score = 46 (21.3 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ N I + P+ F+D+Q+ ++L
Sbjct: 383 LQLLLLNANKINCVRPDAFQDLQNLSLL 410
Score = 38 (18.4 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 5 LIFMSK--LKSLDLSYNDIVEINPEIFKDIQD 34
L+F + L LDLS N I I + F+ D
Sbjct: 127 LLFQNNQALSRLDLSENTIQAIPRKAFRGATD 158
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 145 (56.1 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 45/177 (25%), Positives = 80/177 (45%)
Query: 43 IFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDL-GTEVLKIVPSE 101
+ L +L +A CP C C+ + + R + P ++DL G + +I ++
Sbjct: 15 LVLLILGEAAPQACPAQCSCSGSTVDCHGLALRSVPRSIPRNTERLDLNGNNITRITKTD 74
Query: 102 -ENPNHLTIGPI------------FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNL 148
HL + + FQ + LE L + + + F G L L+L
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDL 134
Query: 149 THNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ N I ++ F+G ++++ L LD+N+I I F L DL VL+L +N I++L+
Sbjct: 135 SENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Score = 142 (55.0 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 48/156 (30%), Positives = 75/156 (48%)
Query: 51 SASVM-CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S SV+ CP C C+ + IV RG IP + TE+ ++ E+N +
Sbjct: 267 SCSVLHCPAACTCSNN------IVDCRGKGLTEIPTNLPETITEI-RL---EQNSIKVIP 316
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F ++ L + ++N+ I + F G+ SL L L N IT L F+G+ +LQ
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQL 376
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L+ NKI + F L +L +LSL N++ +A
Sbjct: 377 LLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 412
Score = 130 (50.8 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 36/128 (28%), Positives = 57/128 (44%)
Query: 117 QHLEELHITNS---FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ EL + N+ + A G F +P LR +N ++N IT + + F+G + E+ L
Sbjct: 533 QYTAELRLNNNEFTVLEATGI--FKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLT 590
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E++ +F L L+ L L NRIS + N I I P F
Sbjct: 591 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAF 650
Query: 234 KDIQELKT 241
+ L T
Sbjct: 651 DTLHSLST 658
Score = 130 (50.8 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 44/155 (28%), Positives = 75/155 (48%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A + CP C C G + C + IP + T L++ +E T G
Sbjct: 502 ADLACPEKCRC----EGT-TVDCSNQKLTK-IP-DHIPQYTAELRLNNNEFTVLEAT-G- 552
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF++ L +++ +N+ I I F G + + LT N + ++ FKG+ +L+ L
Sbjct: 553 IFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLM 612
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L N+I + + F+ LS +R+LSL N+I+ +AP
Sbjct: 613 LRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAP 647
Score = 121 (47.7 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 26/77 (33%), Positives = 51/77 (66%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNHF ++ ++ ++ + L ++ L NR++ ++ +F+N+T L+ L +SYN+L + +F
Sbjct: 763 GNHFTLVPKELYNYKH-LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 821
Query: 354 DPIENSLRDLKISGNNI 370
D ++ SLR L + GN+I
Sbjct: 822 DGLK-SLRLLSLHGNDI 837
Score = 108 (43.1 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N NHL + P +F L L ++ + I AI F G ++ L L +N I+ + D
Sbjct: 111 NRNHLQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA 170
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + +L+ L L+ N I + + F H+ LR L N +
Sbjct: 171 FRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 106 (42.4 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 32/147 (21%), Positives = 64/147 (43%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ E L + + I I F G+ LR L L N I+++ F+ + L+ L L+ N
Sbjct: 55 RNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNH 114
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ P +F+ S L L L+ N+I + + YN I I F+ +
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 237 QELKTFKCRSCGLENINPMMYSILADL 263
++L+ + + ++ ++ + L
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKL 201
Score = 97 (39.2 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 33/126 (26%), Positives = 49/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L NNIT + +F G+ +L+ L L NKI +I F L +L L L N +
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I I + F+ ++K + + I + L DL
Sbjct: 120 ELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEV 179
Query: 266 LDLGYN 271
L L N
Sbjct: 180 LTLNNN 185
Score = 94 (38.1 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 33/139 (23%), Positives = 57/139 (41%)
Query: 231 EIFKDIQELKT-FKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
EI ++ E T + ++ I P +S L +DL NQ
Sbjct: 293 EIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS 352
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
GN + + F F LQ+L L N++ + AF +L NL L + NKL +
Sbjct: 353 LVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 412
Query: 350 VASFDPIENSLRDLKISGN 368
+F P+ +++ + ++ N
Sbjct: 413 KGTFSPLR-AIQTMHLAQN 430
Score = 86 (35.3 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+ IP F LR + L++N+IS+LAP N I
Sbjct: 302 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
E+ +F+ + L+ + IN + DL L+L
Sbjct: 362 ELPKSLFEGLFSLQLLLLNA---NKINCLRVDAFQDLHNLNL 400
Score = 79 (32.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 35/152 (23%), Positives = 61/152 (40%)
Query: 330 TNLTNLI-ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
TNL I E+ + N + + +F P + LR + +S N I
Sbjct: 296 TNLPETITEIRLEQNSIKVIPPGAFSPYKK-LRRIDLSNNQISELAPDAFQGLRSLNSLV 354
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
+ T++PK LF+ LQ L L+ N + + +Q L L L NK + +
Sbjct: 355 LYGN-KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 413
Query: 449 KSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
++ + + +H A+N F + A+Y
Sbjct: 414 GTFSPLRAIQTMH-LAQNPFICDCHLKWLADY 444
Score = 77 (32.2 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + E+ +T++ + + F G+ SL+ L L N I+ + + +F G+ +++ L L
Sbjct: 578 FEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSL 637
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHN 199
N+I +I F L L L+L N
Sbjct: 638 YDNQIATIAPGAFDTLHSLSTLNLLAN 664
Score = 72 (30.4 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+ + ++ +F L LR ++ ++N+I+ + N +
Sbjct: 537 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLEN 596
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
+ ++FK ++ LKT RS + + + L+ + L L NQ
Sbjct: 597 VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 641
Score = 68 (29.0 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 394 NYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
++T +PK L+ HL ++LS N + + N + + +L L LS N+ + +++
Sbjct: 765 HFTLVPKELYNYK-HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 821
Score = 68 (29.0 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK--------FKGFDEKSYI 452
G+FK P L+ +N S N + DI ++ + + L+ N+ FKG + +
Sbjct: 552 GIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Query: 453 MSEPKNIHKAAKNSFALQSSM 473
M I +SF SS+
Sbjct: 612 MLRSNRISCVGNDSFIGLSSV 632
Score = 68 (29.0 bits), Expect = 7.6e-11, Sum P(4) = 7.6e-11
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + K F L+ L L+ NR++ V +F L+++ L + N++ + +FD
Sbjct: 592 NRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFD 651
Query: 355 PIENSLRDLKISGN 368
+ +SL L + N
Sbjct: 652 TL-HSLSTLNLLAN 664
Score = 65 (27.9 bits), Expect = 8.3e-08, Sum P(3) = 8.3e-08
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + +SFS+ +L L L NRL + F L +L L + N + + +F
Sbjct: 787 NRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFS 846
Query: 355 PIENSLRDLKISGN 368
+ ++L L I N
Sbjct: 847 DL-SALSHLAIGAN 859
Score = 61 (26.5 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 24/88 (27%), Positives = 35/88 (39%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
LGT L + EN F+ ++ L + + I I F + L L L
Sbjct: 124 LGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLN 183
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKI 177
+NNIT L +F M L+ L N +
Sbjct: 184 NNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 57 (25.1 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 25/124 (20%), Positives = 44/124 (35%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L L +N T L FK + L+++ NKI I F + + + L NR+ +
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENV 597
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
+ N I + + F + ++ + I P + L L
Sbjct: 598 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLS 657
Query: 265 YLDL 268
L+L
Sbjct: 658 TLNL 661
Score = 56 (24.8 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I E+ P+ F+ ++ L
Sbjct: 325 KLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 55 (24.4 bits), Expect = 8.3e-07, Sum P(3) = 8.3e-07
Identities = 20/83 (24%), Positives = 31/83 (37%)
Query: 263 LIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLA 322
L +DL N+ N I ++F L++L L N ++
Sbjct: 779 LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 838
Query: 323 KVTTTAFTNLTNLIELDISYNKL 345
V AF++L+ L L I N L
Sbjct: 839 VVPEGAFSDLSALSHLAIGANPL 861
Score = 50 (22.7 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N I E +F + + L NRL V F L +L L + N++ + SF
Sbjct: 568 NKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFI 627
Query: 355 PIENSLRDLKISGNNI 370
+ +S+R L + N I
Sbjct: 628 GL-SSVRLLSLYDNQI 642
Score = 49 (22.3 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 25/143 (17%), Positives = 50/143 (34%)
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ IP+++ ++++R L N I + P N I E+ P+ F+ +
Sbjct: 291 LTEIPTNLPETITEIR---LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL 347
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
+ L + + + ++ L L L L N+ N
Sbjct: 348 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNK 407
Query: 297 FPVILEKSFSSQFKLQVLCLKRN 319
I + +FS +Q + L +N
Sbjct: 408 LQTIAKGTFSPLRAIQTMHLAQN 430
Score = 47 (21.6 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N + T F L L +++ S NK+ +E +F+ + ++ ++ N ++
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAG-VNEILLTSNRLE 595
Score = 46 (21.3 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 5 LIFM--SKLKSLDLSYNDIVEINPEIFKDIQD 34
L+F+ SKL LDLS N I I + F+ D
Sbjct: 121 LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVD 152
Score = 45 (20.9 bits), Expect = 9.5e-11, Sum P(4) = 9.5e-11
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
+K+L L YN I I F+ ++D +L
Sbjct: 153 IKNLQLDYNQISCIEDGAFRALRDLEVL 180
Score = 45 (20.9 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 16/73 (21%), Positives = 26/73 (35%)
Query: 249 LENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
+ ++ +S + L+ L L YN+ GN V+ E +FS
Sbjct: 789 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDL 848
Query: 309 FKLQVLCLKRNRL 321
L L + N L
Sbjct: 849 SALSHLAIGANPL 861
Score = 44 (20.5 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L+L GN++ + + L+HL + N
Sbjct: 816 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGAN 859
Score = 43 (20.2 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 22/121 (18%), Positives = 40/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + + P + L L L L N+
Sbjct: 310 NSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFE 369
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L + F+ L + + ++
Sbjct: 370 GLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQ 429
Query: 343 N 343
N
Sbjct: 430 N 430
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 209 (78.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 101/409 (24%), Positives = 163/409 (39%)
Query: 51 SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIG 110
+A +C C C D R + C G +P G + T++L I + N++T
Sbjct: 107 AAPPLCAAPCSCDGDRR----VDCS-GKGLTAVPEG-LSAFTQLLDI-----SMNNITQL 155
Query: 111 P--IFQQFQHLEELHITNSFIPAIGFHP--FWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
P F+ F LEEL + + + I HP G+ L+ L L +N + ++ +G+ +
Sbjct: 156 PEDAFKNFPFLEELRLAGNDLSFI--HPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSS 213
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
LQ L LD N I S+P F L+ LR L L N ++++ N I
Sbjct: 214 LQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKIS 273
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
I F ++ L + ++++ + L +L LDL YN
Sbjct: 274 SIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSL 333
Query: 287 XXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
N VI + +F L+ + L N L+ V +AF NL+ L L I +
Sbjct: 334 KELLFHS-NSISVIPDGAFDGNPLLKTIHLYDNPLSFVGNSAFHNLSELHSLVIRGASM- 391
Query: 347 RLEVASFDPIENSLR--DLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK 404
V F + ++R L ++G I D++Y I K L
Sbjct: 392 ---VQRFPNLTGTVRLESLTLTGTKISSISNNLCQEQKRLRTL----DLSYNSI-KDLPS 443
Query: 405 MNP-H-LQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
N H L+ ++L N + I +Q L LDLSRN D++++
Sbjct: 444 FNGCHALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEIDDRAF 492
Score = 167 (63.8 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 65/258 (25%), Positives = 104/258 (40%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F L LH+ N+ I ++G H F G+ +L L+L +NN+ K + +L+EL
Sbjct: 280 FTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEF-PQAIKALPSLKELLF 338
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N I IP F L+ + L N +S + +V+ P +
Sbjct: 339 HSNSISVIPDGAFDGNPLLKTIHLYDNPLSFVGNSAFHNLSELHSLVIRGASMVQRFPNL 398
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
++ L++ + +I+ + L LDL YN
Sbjct: 399 TGTVR-LESLTLTGTKISSISNNLCQEQKRLRTLDLSYNSIKDLPSFNGCHALEEISLQR 457
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N I E +F L++L L RN + ++ AF L ++ LD+S+N E+ S
Sbjct: 458 --NQIHQIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKLGSITNLDVSFN-----ELTS 510
Query: 353 FDPIE--NSLRDLKISGN 368
F P E N L LK+ GN
Sbjct: 511 F-PTEGLNGLNQLKLVGN 527
Score = 149 (57.5 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 69/333 (20%), Positives = 127/333 (38%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
+ L+ L + N+ + + G+ SL+ L L N+ITS+ + +F+G+ L+ L+LD N
Sbjct: 188 KELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNS 247
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ +P +L L+ L+LA N+IS + N I + F +
Sbjct: 248 LTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGL 307
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L+T L P L L L N N
Sbjct: 308 DNLETLDLNYNNLGEF-PQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNP 366
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELD---ISYNKLDRLEVASF 353
+ +F + +L L ++ + + F NLT + L+ ++ K+ + +
Sbjct: 367 LSFVGNSAFHNLSELHSLVIRGASMVQ----RFPNLTGTVRLESLTLTGTKISSIS-NNL 421
Query: 354 DPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLN 413
+ LR L +S N+I+ + I + F+ L+ L+
Sbjct: 422 CQEQKRLRTLDLSYNSIKDLPSFNGCHALEEIS---LQRNQIHQIKEDTFQGLTSLKILD 478
Query: 414 LSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
LS N + +I + + +T+LD+S N+ F
Sbjct: 479 LSRNLIHEIDDRAFAKLGSITNLDVSFNELTSF 511
Score = 144 (55.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 83/380 (21%), Positives = 152/380 (40%)
Query: 14 LDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIV 73
LD+S N+I ++ + FK+ F L L + S + P AL +++
Sbjct: 145 LDISMNNITQLPEDAFKN-------FPFLEELRLAGNDLSFIHPK----ALSGLKELKVL 193
Query: 74 CRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQHLEELHITNSFIPA 131
+ + +P + G L+ + + N H+T P F+ L L + ++ +
Sbjct: 194 TLQNNQLKTVP-SEAIRGLSSLQSLRLDAN--HITSVPEDSFEGLTQLRHLWLDDNSLTE 250
Query: 132 IGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDL 191
+ HP +P+L+ L L N I+S+ D+ F + +L L+L NKI+S+ F L +L
Sbjct: 251 VPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNL 310
Query: 192 RVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLEN 251
L L +N + + P+ N I I F LKT L
Sbjct: 311 ETLDLNYNNLGEF-PQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLSF 369
Query: 252 INPMMYSILADLIYLDL-GYNQXX-----XXXXXXXXXXXXXXXXXXXGNHFPV------ 299
+ + L++L L + G + N+
Sbjct: 370 VGNSAFHNLSELHSLVIRGASMVQRFPNLTGTVRLESLTLTGTKISSISNNLCQEQKRLR 429
Query: 300 ILEKSFSS-----QFK----LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
L+ S++S F L+ + L+RN++ ++ F LT+L LD+S N + ++
Sbjct: 430 TLDLSYNSIKDLPSFNGCHALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEIDD 489
Query: 351 ASFDPIENSLRDLKISGNNI 370
+F + S+ +L +S N +
Sbjct: 490 RAFAKL-GSITNLDVSFNEL 508
Score = 37 (18.1 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ ND+ I+P+ +++ +L
Sbjct: 166 LEELRLAGNDLSFIHPKALSGLKELKVL 193
>FB|FBgn0004364 [details] [associations]
symbol:18w "18 wheeler" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0006955
"immune response" evidence=IEP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019731 "antibacterial humoral response"
evidence=NAS;IMP;TAS] [GO:0048598 "embryonic morphogenesis"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0019730 "antimicrobial
humoral response" evidence=IMP] InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
GO:GO:0048598 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 GO:GO:0019731 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 InterPro:IPR026906 Pfam:PF13306
SUPFAM:SSF52200 FlyBase:FBgn0004364 EMBL:L23171 PIR:T13852
PIR:T13887 HSSP:O60603 ProteinModelPortal:Q24591 STRING:Q24591
PRIDE:Q24591 InParanoid:Q24591 ArrayExpress:Q24591 Bgee:Q24591
Uniprot:Q24591
Length = 1389
Score = 210 (79.0 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 85/367 (23%), Positives = 154/367 (41%)
Query: 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
+ + L+ L + ++ I + + G+ SLR LN+++N++ SL F G L+EL+L
Sbjct: 233 RLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQG 292
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISK--LAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N + +P + L L VL L+ N+++ + N + I +
Sbjct: 293 NDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKT 352
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
FK++ L+ R+ + +I + L +L L+L N+
Sbjct: 353 FKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTL 412
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N ++ ++F + L+ L L N+L +V A +L+ L LD+ N++ + +
Sbjct: 413 NNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPE-AVQDLSMLKTLDLGENQISEFKNNT 471
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
F + N L L++ N I +A I +G F N ++ +
Sbjct: 472 FRNL-NQLTGLRLIDNRI-GNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAI 529
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPK--NIH----KAAKNS 466
L N L DI N ++ + L L+LS N FD ++I S K +IH +A N
Sbjct: 530 RLDKNFLTDI-NGIFATLASLLWLNLSENHLVWFDY-AFIPSNLKWLDIHGNYIEALGNY 587
Query: 467 FALQSSM 473
+ LQ +
Sbjct: 588 YKLQEEI 594
Score = 150 (57.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 83/364 (22%), Positives = 147/364 (40%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRG 68
S+L++LD+S+N++ + P D + L ++ L L H++ S + P AL
Sbjct: 210 SELQTLDVSFNELRSL-P----DAWGASRLRRLQT-LSLQHNNISTLAPN----ALAGLS 259
Query: 69 RYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSF 128
++ + +P + G + L+ + + N + + + + L L ++ +
Sbjct: 260 SLRVLNISYNHLVSLP-SEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQ 318
Query: 129 IPA--IGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFM 186
+ + + F G+ L LNL++N +T + FK + LQ L + N I I F+
Sbjct: 319 LTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFL 378
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
L +L L+LA NR+ L R N + + + F++ +LK S
Sbjct: 379 PLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSS 438
Query: 247 CGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFS 306
L + P L+ L LDLG NQ N I F
Sbjct: 439 NQLTEV-PEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQ 497
Query: 307 SQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKIS 366
+L VL L +NR+ + AF T + + + N L + F + SL L +S
Sbjct: 498 DLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDIN-GIFATLA-SLLWLNLS 555
Query: 367 GNNI 370
N++
Sbjct: 556 ENHL 559
Score = 144 (55.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 91/367 (24%), Positives = 147/367 (40%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDR 67
+S L+ L++SYN +V + E F ++ L LY L + LD
Sbjct: 258 LSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLL--VLDLS 315
Query: 68 GRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLT-IGP-IFQQFQHLEELHIT 125
G ++ D N G + L IV + N N LT IG F++ L+ L +
Sbjct: 316 GN-QLTSHHVD--NSTFAGLIRL------IVLNLSN-NALTRIGSKTFKELYFLQILDMR 365
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
N+ I I F + +L LNL N + +L + F G+ L +L L+ N + + S F
Sbjct: 366 NNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAF 425
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCR 245
+ SDL+ L L+ N+++++ P N I E F+++ +L +
Sbjct: 426 RNCSDLKELDLSSNQLTEV-PEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLI 484
Query: 246 SCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSF 305
+ NI M+ L L L+L N+ N F + F
Sbjct: 485 DNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKN-FLTDINGIF 543
Query: 306 SSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR--DL 363
++ L L L N L AF +NL LDI N ++ L ++ ++ +R L
Sbjct: 544 ATLASLLWLNLSENHLVWFDY-AFIP-SNLKWLDIHGNYIEAL--GNYYKLQEEIRVTTL 599
Query: 364 KISGNNI 370
S N I
Sbjct: 600 DASHNRI 606
Score = 134 (52.2 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 47/153 (30%), Positives = 74/153 (48%)
Query: 54 VMCPYMCECALDDRGRYEIV-CRRGDMAN-PIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
V+CP C C D IV C R D+A P I Q +V + N L +G
Sbjct: 757 VICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQ-----DVSDLYLDGNNMPELEVGH 811
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+ + ++L L++ S + + + +LR L+L +N +T+L F+ + L+ELY
Sbjct: 812 LTGR-RNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELY 870
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L N + I ++ F L L VL L +NR+S L
Sbjct: 871 LHNNMLTHISNATFEPLVSLEVLRLDNNRLSSL 903
Score = 133 (51.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 73/346 (21%), Positives = 128/346 (36%)
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
G FQ + L ELH+ ++ I + + +PSL+ LNLT N I S F G E
Sbjct: 138 GQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSA---EFLGF---SE 191
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPR-XXXXXXXXXXXXXXYNDIVEI 228
+ + + +V S+L+ L ++ N + L +N+I +
Sbjct: 192 KLCAGSALSNANGAVSGG-SELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTL 250
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXX 288
P + L+ L ++ ++ +L L L N
Sbjct: 251 APNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLL 310
Query: 289 XXXXXGNHFPV--ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
GN + +F+ +L VL L N L ++ + F L L LD+ N +
Sbjct: 311 VLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIG 370
Query: 347 RLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKG-LFKM 405
+E +F P+ N L L ++ N + + N I + F+
Sbjct: 371 HIEEGAFLPLYN-LHTLNLAENRLHTLDNRIFNGLYVLTKLTL--NNNLVSIVESQAFRN 427
Query: 406 NPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
L+ L+LS N L ++ + ++ T LDL N+ F ++
Sbjct: 428 CSDLKELDLSSNQLTEVPEAVQDLSMLKT-LDLGENQISEFKNNTF 472
Score = 119 (46.9 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 100 SEENPNHLTIGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNL-THNNI---- 153
S+E + + P +F+Q Q L EL I + + + F G+ SL+ L L +HN +
Sbjct: 72 SQELLHASELAPGLFRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPG 131
Query: 154 --TSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
L +F+G+ L EL+L N I +P V+ + L++L+L NRI
Sbjct: 132 KTLELHGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRI 181
Score = 82 (33.9 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 32/126 (25%), Positives = 53/126 (42%)
Query: 247 CGLENINPMMYSILADL--IYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKS 304
CG +++ + I D+ +YLD G N N + S
Sbjct: 778 CGRQDLAALPNRIPQDVSDLYLD-GNNMPELEVGHLTGRRNLRALYLNASN-LMTLQNGS 835
Query: 305 FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLK 364
+ L+VL L+ N+L + T F +L L EL + N L + A+F+P+ SL L+
Sbjct: 836 LAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLV-SLEVLR 894
Query: 365 ISGNNI 370
+ N +
Sbjct: 895 LDNNRL 900
Score = 43 (20.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 394 NYTDIPKGLFKMNPHLQFLNLSGNNLQDIHN--LLYQSNIKLTHLDLSRNKFKGFD 447
N ++ G +L+ L L+ +NL + N L N+++ HL+ NK +
Sbjct: 803 NMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLE--NNKLTALE 856
Score = 37 (18.1 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 4 TLIFMSKLKSLDLSYNDIVEINPEIFKDI 32
T + +L L+LS N + I + FK++
Sbjct: 328 TFAGLIRLIVLNLSNNALTRIGSKTFKEL 356
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 205 (77.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 76/333 (22%), Positives = 135/333 (40%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F+ HL +L++ + + + F G+ +L L L N +T L G+ L+EL
Sbjct: 165 LFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELD 224
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L N + S+ ++VF+HL L+ L L N I+ +APR +N + + +
Sbjct: 225 LSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLED 284
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F + L + + ++ P + L L L LG+N+
Sbjct: 285 TFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLT 344
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N + +F F + V+ L N L + F L L L + ++ L R+ +
Sbjct: 345 LNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLH 404
Query: 352 SFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQF 411
+F + + LR L + N+I A+ T +P+ LF+ L++
Sbjct: 405 TFAGL-SGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQ-LTHLPRQLFQGLGQLEY 462
Query: 412 LNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
L LS N L + + + LDLS N+ +
Sbjct: 463 LLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLE 495
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 77/344 (22%), Positives = 136/344 (39%)
Query: 105 NHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N L + P +FQ +L EL + + + + G+ LR L+L+ N + S+ F
Sbjct: 180 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFI 239
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
+ LQ+LYLD N I ++ F+ + LR L L+HNR++ L +
Sbjct: 240 HLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAH 299
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I + P FKD+ L+ + + + + L L L L NQ
Sbjct: 300 NAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFF 359
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
GN + E F +L L L+ + L ++ F L+ L L +
Sbjct: 360 GLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRD 419
Query: 343 NKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGL 402
N + +E S + + L +L ++ N + +++ T + + +
Sbjct: 420 NSISSIEEQSLAGL-SELLELDLTANQL-THLPRQLFQGLGQLEYLLLSNNQLTMLSEDV 477
Query: 403 FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
+L+LS N L+ L+ S +L +L+L N + F
Sbjct: 478 LGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSLQTF 521
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/253 (22%), Positives = 111/253 (43%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
Q+L LH+ + + ++ F PSL L+L +N + L + F+G+ +L +L L +N
Sbjct: 122 QNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNS 181
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ +P +VF L +L L LA N+++ L P N + + +F +
Sbjct: 182 LVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHL 241
Query: 237 QEL-KTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGN 295
L K + R+ + + P + + L +LDL +N+ N
Sbjct: 242 PRLQKLYLDRNL-ITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHN 300
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDP 355
+ ++F L+ L L NR+ ++ F L L L ++ N++ ++V +F
Sbjct: 301 AITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFG 360
Query: 356 IENSLRDLKISGN 368
+ N + + +SGN
Sbjct: 361 LFN-VAVMNLSGN 372
Score = 156 (60.0 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 60/256 (23%), Positives = 108/256 (42%)
Query: 1 MEFTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMC 60
+E T + L L L++N I + P FKD+ L + L L H+ +
Sbjct: 282 LEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLH---FLEE----LQLGHNRIR----QLG 330
Query: 61 ECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQH 118
E + G+ E++ + + + +G G + + + N L P +FQ
Sbjct: 331 EKTFEGLGQLEVLTLNDNQIHEVKVGAF-FG--LFNVAVMNLSGNCLRSLPEHVFQGLGR 387
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L LH+ +S + I H F G+ LR L L N+I+S+ + + G+ L EL L N++
Sbjct: 388 LHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLT 447
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
+P +F L L L L++N+++ L+ +N + +F +
Sbjct: 448 HLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGR 507
Query: 239 LKTFKCRSCGLENINP 254
L+ R+ L+ P
Sbjct: 508 LRYLNLRNNSLQTFVP 523
Score = 125 (49.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 54/256 (21%), Positives = 95/256 (37%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
LG + L+ + N + F L L + ++ I ++ F + L L L
Sbjct: 263 LGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLG 322
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
HN I L + F+G+ L+ L L+ N+I + F L ++ V++L+ N + L
Sbjct: 323 HNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVF 382
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLG 269
++ + I F + L+ R + +I + L++L+ LDL
Sbjct: 383 QGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLT 442
Query: 270 YNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAF 329
NQ N ++ E + L L NRL F
Sbjct: 443 ANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLF 502
Query: 330 TNLTNLIELDISYNKL 345
++L L L++ N L
Sbjct: 503 SSLGRLRYLNLRNNSL 518
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 63/292 (21%), Positives = 113/292 (38%)
Query: 152 NITSLLDYNFKGM-MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXX 210
N+T L D G+ ++ + L+LD N + SIPS+ F +LS L L+L + + L P+
Sbjct: 64 NLTQLPD----GIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALL 119
Query: 211 XXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGY 270
N + + +F+ L + + L + ++ L+ L L+LG+
Sbjct: 120 GLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGW 179
Query: 271 NQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFT 330
N GN + +L+ L L RN L V F
Sbjct: 180 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFI 239
Query: 331 NLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXI 390
+L L +L + N + + +F ++ +LR L +S N + +
Sbjct: 240 HLPRLQKLYLDRNLITAVAPRAFLGMK-ALRWLDLSHNRV-AGLLEDTFPGLLGLHVLRL 297
Query: 391 ADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
A T + FK L+ L L N ++ + ++ +L L L+ N+
Sbjct: 298 AHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQ 349
Score = 39 (18.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 8 MSKLKSLDLSYNDIVEINPEIF 29
+ +L+ LDLS N + + +F
Sbjct: 217 LGELRELDLSRNALRSVKANVF 238
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 205 (77.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 66/260 (25%), Positives = 107/260 (41%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F Q L++L++ + I A+ F G+ +LR+L+L+HN + LL+ F G++ L+ L
Sbjct: 237 VFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLR 296
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L N I S+ F L L L L HNRI +LA R +N + E+
Sbjct: 297 LSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAG 356
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F + + L N+ ++ L L L L +
Sbjct: 357 AFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLF 416
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N I E+S +L L L N+L + F L L L +S N+L L
Sbjct: 417 LKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPAD 476
Query: 352 SFDPIENSLRDLKISGNNIQ 371
+ P++ + L +S N ++
Sbjct: 477 ALGPLQRAFW-LDVSHNRLE 495
Score = 201 (75.8 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 65/259 (25%), Positives = 109/259 (42%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F + L L ++++ + + F G+ LR L L+HN I SL FK + L+EL L
Sbjct: 262 FLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQL 321
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N+I + F L L VL+L HN++ ++ N + + ++
Sbjct: 322 GHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQV 381
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
F+ + +L + L I P ++ L+ L L L N
Sbjct: 382 FRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDL 441
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N + + F KL+ L L RNRLA++ A L LD+S+N+L+ L +
Sbjct: 442 TSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSL 501
Query: 353 FDPIENSLRDLKISGNNIQ 371
P+ LR L + N+++
Sbjct: 502 LAPL-GRLRYLSLRNNSLR 519
Score = 194 (73.4 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 87/355 (24%), Positives = 145/355 (40%)
Query: 90 LGTEVLKIVPSEENP-NHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNL 148
LG E L + E N L +G F L L ++N+ + + F G+ SL LNL
Sbjct: 119 LGLENLCHLHLERNQLRSLALGT-FAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNL 177
Query: 149 THNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRX 208
N++ L D F+G+ +L+EL L N++ + ++F L++LR L L+ N + +
Sbjct: 178 GWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANV 237
Query: 209 XXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
N I + P F ++ L+ + + + L L L L
Sbjct: 238 FVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRL 297
Query: 269 GYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTA 328
+N N + E+SF +L+VL L N+L +V A
Sbjct: 298 SHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGA 357
Query: 329 FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
F LTN+ +++S N L L F + L L + G+ +
Sbjct: 358 FLGLTNVAVMNLSGNCLRNLPEQVFRGL-GKLHSLHLEGSCL-GRIRPHTFTGLSGLRRL 415
Query: 389 XIADMNYTDIPK-GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+ D I + L+ + L+ L+L+ N L + + L+Q KL +L LSRN+
Sbjct: 416 FLKDNGLVGIEEQSLWGLAELLE-LDLTSNQLTHLPHRLFQGLGKLEYLLLSRNR 469
Score = 191 (72.3 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 87/397 (21%), Positives = 148/397 (37%)
Query: 56 CPYMCECALDDRG-RYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPI-F 113
CP C C+ DD + C ++ +P G + GT+ L + + N ++ P F
Sbjct: 41 CPAACVCSYDDDADELSVFCSSRNLTR-LPDG-VPGGTQALWL----DGNNLSSVPPAAF 94
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q L L++ + ++ G+ +L +L+L N + SL F L L L
Sbjct: 95 QNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLS 154
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++ + +F L L L+L N ++ L N + + P +F
Sbjct: 155 NNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALF 214
Query: 234 KDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXX 293
+ EL+ L I ++ L L L L N
Sbjct: 215 SGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLS 274
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
N +LE +F L+VL L N +A + F +L L EL + +N++ +L SF
Sbjct: 275 HNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSF 334
Query: 354 DPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLN 413
+ + L L + N +Q + ++P+ +F+ L L+
Sbjct: 335 EGL-GQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNC-LRNLPEQVFRGLGKLHSLH 392
Query: 414 LSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKS 450
L G+ L I + L L L N G +E+S
Sbjct: 393 LEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQS 429
Score = 146 (56.5 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 76/361 (21%), Positives = 136/361 (37%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDR 67
+ L+ L L+ N + + P +F + + L L + ++ V P + + LD
Sbjct: 193 LGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLD-- 250
Query: 68 GRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNS 127
R +A P G LG + L+ + N + F L L ++++
Sbjct: 251 --------RNLIAAVAP-GAF-LGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHN 300
Query: 128 FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMH 187
I ++ F + L L L HN I L + +F+G+ L+ L LD N+++ + + F+
Sbjct: 301 AIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLG 360
Query: 188 LSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSC 247
L+++ V++L+ N + L + + + I P F + L+ +
Sbjct: 361 LTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDN 420
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
GL I LA+L+ LDL NQ N + +
Sbjct: 421 GLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGP 480
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG 367
+ L + NRL + + L L L + N L +F P L L + G
Sbjct: 481 LQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSL-----RTFTPQPPGLERLWLEG 535
Query: 368 N 368
N
Sbjct: 536 N 536
Score = 145 (56.1 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 57/254 (22%), Positives = 101/254 (39%)
Query: 1 MEFTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMC 60
+E T + L+ L LS+N I + P FKD+ L + L L H+ +
Sbjct: 282 LEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLH---FLEE----LQLGHNRIR----QLA 330
Query: 61 ECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLE 120
E + + G+ E++ + + G LG + ++ N +F+ L
Sbjct: 331 ERSFEGLGQLEVLTLDHNQLQEVKAGAF-LGLTNVAVMNLSGNCLRNLPEQVFRGLGKLH 389
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
LH+ S + I H F G+ LR L L N + + + + G+ L EL L N++ +
Sbjct: 390 SLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHL 449
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
P +F L L L L+ NR+++L +N + + + + L+
Sbjct: 450 PHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLR 509
Query: 241 TFKCRSCGLENINP 254
R+ L P
Sbjct: 510 YLSLRNNSLRTFTP 523
>TAIR|locus:2066306 [details] [associations]
symbol:AT2G26380 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0006952
"defense response" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 EMBL:CP002685
GenomeReviews:CT485783_GR HSSP:P25147 InterPro:IPR013210
Pfam:PF08263 EMBL:AC002505 HOGENOM:HOG000066206 eggNOG:NOG306417
IPI:IPI00542076 PIR:T00971 RefSeq:NP_180206.1 UniGene:At.66247
ProteinModelPortal:O48705 SMR:O48705 PaxDb:O48705
EnsemblPlants:AT2G26380.1 GeneID:817178 KEGG:ath:AT2G26380
TAIR:At2g26380 InParanoid:O48705 OMA:TKIANIN PhylomeDB:O48705
ProtClustDB:CLSN2679289 ArrayExpress:O48705 Genevestigator:O48705
Uniprot:O48705
Length = 480
Score = 203 (76.5 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 82/339 (24%), Positives = 135/339 (39%)
Query: 108 TIGPIFQQFQHLEELHITNSFIPAIGFHPF-WGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
TI P + QHLE + N F PF + +P L+Y+ L + ++ L N +
Sbjct: 94 TISPSLAKLQHLEGVVFINLKNITGPFPPFLFRLPHLKYVYLENTRLSGPLPANIGALNR 153
Query: 167 LQELYLDFNK-IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
L L + N+ I SIPSS+ +L+ L L+L N ++ P N +
Sbjct: 154 LDTLTVKGNRFIGSIPSSI-SNLTRLNYLNLGGNLLTGTIPLGIANLKLISNLNLDGNRL 212
Query: 226 VEINPEIFKDIQELKTFKC-RSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXX 284
P+IFK + L+ R+ + P + S+ L +L+LG N
Sbjct: 213 SGTIPDIFKSMTNLRILTLSRNRFSGKLPPSIASLAPVLAFLELGQNNLSGSIPSYLSRF 272
Query: 285 XXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTN-LIELDISYN 343
N F + KS + K+ + L N L N+ N ++ LD+SYN
Sbjct: 273 VALDTLDLSKNRFSGAVPKSLAKLTKIANINLSHNLLTNPFPVL--NVKNYILTLDLSYN 330
Query: 344 KLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLF 403
K + + + L LK++ I+ ++D + P
Sbjct: 331 KFHMETIPEWVTSASILGSLKLAKCGIKMSLDDWKTRQTDLYVSIDLSDNEISGSPLRFL 390
Query: 404 KMNPHLQFLNLSGNNLQ-DIHNLLYQSNIKLTHLDLSRN 441
K L+ +SGN L+ D+ L + + ++ LDLSRN
Sbjct: 391 KGAEQLREFRMSGNKLRFDLRKLSFSTTLET--LDLSRN 427
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 144 (55.7 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 49/156 (31%), Positives = 75/156 (48%)
Query: 51 SASVM-CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S SV+ CP C C+ + IV RG IP + TE+ ++ E+N +
Sbjct: 267 SCSVLHCPAACTCSNN------IVDCRGKGLTEIPTNLPETITEI-RL---EQNSIRVIP 316
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F ++ L L ++N+ I + F G+ SL L L N IT L F+G+ +LQ
Sbjct: 317 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQL 376
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L+ NKI + F L +L +LSL N++ +A
Sbjct: 377 LLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVA 412
Score = 144 (55.7 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 52/184 (28%), Positives = 85/184 (46%)
Query: 36 TMLFQVTIFLYLLHSSASVMCPYMCECA---LDDRG-RYEIVCR-------RGDM-ANPI 83
T+ + + L +L+ A CP C C+ +D G V R R D+ N I
Sbjct: 8 TLSLSLGLVLSILNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNI 67
Query: 84 P-IGQMDL-GTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVP 141
I ++D G L+++ EN FQ + LE L + + + F G
Sbjct: 68 TRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTA 127
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
L L+L+ N I ++ F+G ++++ L LD+N+I I F L DL VL+L +N I
Sbjct: 128 KLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNI 187
Query: 202 SKLA 205
++L+
Sbjct: 188 TRLS 191
Score = 129 (50.5 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 117 QHLEELHITNS---FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ EL + N+ + A G F +P LR +N ++N IT + + F+G + E+ L
Sbjct: 525 QYTAELRLNNNEFTVLEATGI--FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 582
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E++ +F L L+ L L NRIS + N I + P F
Sbjct: 583 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAF 642
Query: 234 KDIQELKT 241
+ L T
Sbjct: 643 DSLHSLST 650
Score = 129 (50.5 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 44/155 (28%), Positives = 75/155 (48%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A + CP C C G + C + N IP + T L++ +E T G
Sbjct: 494 ADLACPEKCRC----EGT-TVDCSNQRL-NKIP-DHIPQYTAELRLNNNEFTVLEAT-G- 544
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF++ L +++ +N+ I I F G + + LT N + ++ FKG+ +L+ L
Sbjct: 545 IFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 604
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L N+I + + F+ L +R+LSL N+I+ +AP
Sbjct: 605 LRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAP 639
Score = 118 (46.6 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN F ++ K S+ L ++ L NR++ ++ +F+N+T L+ L +SYN+L + +F
Sbjct: 755 GNQFTLV-PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 813
Query: 354 DPIENSLRDLKISGNNI 370
D ++ SLR L + GN+I
Sbjct: 814 DGLK-SLRLLSLHGNDI 829
Score = 103 (41.3 bits), Expect = 9.9e-08, Sum P(3) = 9.9e-08
Identities = 31/147 (21%), Positives = 64/147 (43%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ E L + + I I F G+ LR L L N I+++ F+ + L+ L L+ N
Sbjct: 55 RNTERLDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNN 114
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ P +F+ + L L L+ N+I + + YN I I F+ +
Sbjct: 115 LQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 237 QELKTFKCRSCGLENINPMMYSILADL 263
++L+ + + ++ ++ + L
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKL 201
Score = 95 (38.5 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 32/126 (25%), Positives = 49/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L NNIT + +F G+ +L+ L L N+I +I F L +L L L N +
Sbjct: 60 LDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFP 119
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I I + F+ ++K + + I + L DL
Sbjct: 120 ELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEV 179
Query: 266 LDLGYN 271
L L N
Sbjct: 180 LTLNNN 185
Score = 87 (35.7 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 28/102 (27%), Positives = 43/102 (42%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I IP F LR L L++N+IS+LAP N I
Sbjct: 302 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
E+ +F+ + L+ + IN + DL L+L
Sbjct: 362 ELPKSLFEGLFSLQLLLLNA---NKINCLRVDAFQDLHNLNL 400
Score = 86 (35.3 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 29/117 (24%), Positives = 47/117 (40%)
Query: 252 INPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKL 311
I P +S L LDL NQ GN + + F F L
Sbjct: 315 IPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSL 374
Query: 312 QVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
Q+L L N++ + AF +L NL L + NKL + +F + +++ + ++ N
Sbjct: 375 QLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALR-AIQTMHLAQN 430
Score = 80 (33.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 36/152 (23%), Positives = 61/152 (40%)
Query: 330 TNLTNLI-ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
TNL I E+ + N + + +F P + LR L +S N I
Sbjct: 296 TNLPETITEIRLEQNSIRVIPPGAFSPYKK-LRRLDLSNNQISELAPDAFQGLRSLNSLV 354
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
+ T++PK LF+ LQ L L+ N + + +Q L L L NK + +
Sbjct: 355 LYGN-KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAK 413
Query: 449 KSY-IMSEPKNIHKAAKNSFALQSSMGKNAEY 479
++ + + +H A+N F + A+Y
Sbjct: 414 GTFSALRAIQTMH-LAQNPFICDCHLKWLADY 444
Score = 77 (32.2 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N VI +FS KL+ L L N+++++ AF L +L L + NK+ L + F+
Sbjct: 310 NSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFE 369
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ SL+ L ++ N I + D + KG F +Q ++L
Sbjct: 370 GLF-SLQLLLLNANKINCLRVDAFQDLHNLNLLS-LYDNKLQTVAKGTFSALRAIQTMHL 427
Query: 415 SGNN-LQDIH 423
+ N + D H
Sbjct: 428 AQNPFICDCH 437
Score = 76 (31.8 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 23/87 (26%), Positives = 45/87 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + E+ +T++ + + F G+ SL+ L L N I+ + + +F G+ +++ L L
Sbjct: 570 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSL 629
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHN 199
N+I ++ F L L L+L N
Sbjct: 630 YDNQITTVAPGAFDSLHSLSTLNLLAN 656
Score = 71 (30.1 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+ + ++ +F L LR ++ ++N+I+ + N +
Sbjct: 529 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 588
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
+ ++FK ++ LKT RS + + + L + L L NQ
Sbjct: 589 VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQ 633
Score = 69 (29.3 bits), Expect = 9.8e-09, Sum P(3) = 9.8e-09
Identities = 29/125 (23%), Positives = 50/125 (40%)
Query: 295 NHFPVILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N F V LE + F +L+ + N++ + AF + + E+ ++ N+L+ ++
Sbjct: 535 NEFTV-LEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKM 593
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
F +E SL+ L + N I + D T + G F L L
Sbjct: 594 FKGLE-SLKTLMLRSNRISCVGNDSFIGLGSVRLLS-LYDNQITTVAPGAFDSLHSLSTL 651
Query: 413 NLSGN 417
NL N
Sbjct: 652 NLLAN 656
Score = 66 (28.3 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 22/75 (29%), Positives = 35/75 (46%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQ-----SNIKLT--HLDLSRNK-FKGFDEKSYI 452
G+FK P L+ +N S N + DI ++ + I LT L+ ++K FKG + +
Sbjct: 544 GIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 603
Query: 453 MSEPKNIHKAAKNSF 467
M I +SF
Sbjct: 604 MLRSNRISCVGNDSF 618
Score = 66 (28.3 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + +SFS+ +L L L NRL + F L +L L + N + + +F+
Sbjct: 779 NRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFN 838
Query: 355 PIENSLRDLKISGN 368
+ ++L L I N
Sbjct: 839 DL-SALSHLAIGAN 851
Score = 66 (28.3 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 27/126 (21%), Positives = 45/126 (35%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N+I + F L+ L L N+I + F L L L L N+I++L
Sbjct: 305 IRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP 364
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I + + F+D+ L L+ + +S L +
Sbjct: 365 KSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQT 424
Query: 266 LDLGYN 271
+ L N
Sbjct: 425 MHLAQN 430
Score = 64 (27.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 28/128 (21%), Positives = 51/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N + + AF+ L LD+S N++ L +F + SL L + GN I
Sbjct: 307 LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLR-SLNSLVLYGNKITELPK 365
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + F+ +L L+L N LQ + + + +
Sbjct: 366 SLFEGLFSLQLLLLNAN-KINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQT 424
Query: 436 LDLSRNKF 443
+ L++N F
Sbjct: 425 MHLAQNPF 432
Score = 62 (26.9 bits), Expect = 9.3e-12, Sum P(3) = 9.3e-12
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
+T +PK L HL ++LS N + + N + + +L L LS N+ + +++
Sbjct: 758 FTLVPKELSNYK-HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 813
Score = 60 (26.2 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 24/88 (27%), Positives = 35/88 (39%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
LGT L + EN F+ ++ L + + I I F + L L L
Sbjct: 124 LGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLN 183
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKI 177
+NNIT L +F M L+ L N +
Sbjct: 184 NNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 58 (25.5 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ LDLS N I E+ P+ F+ ++ L
Sbjct: 325 KLRRLDLSNNQISELAPDAFQGLRSLNSL 353
Score = 56 (24.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 25/124 (20%), Positives = 44/124 (35%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L L +N T L FK + L+++ NKI I F S + + L NR+ +
Sbjct: 530 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 589
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
+ N I + + F + ++ + + P + L L
Sbjct: 590 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLS 649
Query: 265 YLDL 268
L+L
Sbjct: 650 TLNL 653
Score = 55 (24.4 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 22/92 (23%), Positives = 32/92 (34%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I ++F L++
Sbjct: 762 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRL 821
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V AF +L+ L L I N L
Sbjct: 822 LSLHGNDISVVPEGAFNDLSALSHLAIGANPL 853
Score = 49 (22.3 bits), Expect = 9.8e-09, Sum P(3) = 9.8e-09
Identities = 24/143 (16%), Positives = 51/143 (35%)
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ IP+++ ++++R L N I + P N I E+ P+ F+ +
Sbjct: 291 LTEIPTNLPETITEIR---LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGL 347
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
+ L + + + ++ L L L L N+ N
Sbjct: 348 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNK 407
Query: 297 FPVILEKSFSSQFKLQVLCLKRN 319
+ + +FS+ +Q + L +N
Sbjct: 408 LQTVAKGTFSALRAIQTMHLAQN 430
Score = 45 (20.9 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
+K+L L YN I I F+ ++D +L
Sbjct: 153 IKNLQLDYNQISCIEDGAFRALRDLEVL 180
Score = 44 (20.5 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L+L GN++ + + L+HL + N
Sbjct: 808 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 851
Score = 44 (20.5 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 29/145 (20%), Positives = 45/145 (31%)
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKL-APRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
++ IP + + ++LR L +N + L A N I +I F+
Sbjct: 515 RLNKIPDHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFE 571
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
+ S LEN+ M+ L L L L N+
Sbjct: 572 GASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYD 631
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRN 319
N + +F S L L L N
Sbjct: 632 NQITTVAPGAFDSLHSLSTLNLLAN 656
Score = 43 (20.2 bits), Expect = 4.4e-13, Sum P(3) = 4.4e-13
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 5 LIFM--SKLKSLDLSYNDIVEINPEIFKDIQD 34
L+F+ +KL LDLS N I I + F+ D
Sbjct: 121 LLFLGTAKLYRLDLSENQIQAIPRKAFRGAVD 152
Score = 43 (20.2 bits), Expect = 7.9e-08, Sum P(3) = 7.9e-08
Identities = 23/121 (19%), Positives = 40/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + + P + L L L L N+
Sbjct: 310 NSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFE 369
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L V F+ L + + ++
Sbjct: 370 GLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLAQ 429
Query: 343 N 343
N
Sbjct: 430 N 430
Score = 43 (20.2 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 17/92 (18%), Positives = 32/92 (34%)
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
P+ + + L + + ++ +S + L+ L L YN+
Sbjct: 762 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRL 821
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
GN V+ E +F+ L L + N L
Sbjct: 822 LSLHGNDISVVPEGAFNDLSALSHLAIGANPL 853
>UNIPROTKB|Q6NUI6 [details] [associations]
symbol:CHADL "Chondroadherin-like protein" species:9606
"Homo sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471095 GO:GO:0005578
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 EMBL:AL035681 EMBL:BC012882
EMBL:BC019839 EMBL:BC040188 EMBL:BC048421 EMBL:BC068590
IPI:IPI00402280 IPI:IPI00855816 RefSeq:NP_612490.1
UniGene:Hs.344488 HSSP:Q9BZR6 ProteinModelPortal:Q6NUI6 SMR:Q6NUI6
DMDM:158563972 PaxDb:Q6NUI6 PRIDE:Q6NUI6 Ensembl:ENST00000216241
GeneID:150356 KEGG:hsa:150356 UCSC:uc003azq.4 UCSC:uc010gyj.3
CTD:150356 GeneCards:GC22M041625 HGNC:HGNC:25165 HPA:HPA005696
HPA:HPA024654 neXtProt:NX_Q6NUI6 PharmGKB:PA162382224
eggNOG:NOG318740 HOGENOM:HOG000111626 HOVERGEN:HBG095510
InParanoid:Q6NUI6 OMA:ICDNSRR GenomeRNAi:150356 NextBio:86414
ArrayExpress:Q6NUI6 Bgee:Q6NUI6 CleanEx:HS_CHADL
Genevestigator:Q6NUI6 Uniprot:Q6NUI6
Length = 762
Score = 160 (61.4 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 66/286 (23%), Positives = 110/286 (38%)
Query: 41 VTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMAN-P--IP-IGQ-MDLGTEVL 95
V + L +A+ CP C C D R + CR ++ P IP + Q +DL +L
Sbjct: 18 VLLLLAPARQAAAQRCPQACIC---DNSRRHVACRYQNLTEVPDAIPELTQRLDLQGNLL 74
Query: 96 KIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITS 155
K++P+ FQ HL L + + + + F G+ L LNL N++
Sbjct: 75 KVIPAAA----------FQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRE 124
Query: 156 LLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXX 215
L G+ +L+ L L+ N +E + F L L L+LAHN + L
Sbjct: 125 LPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRV 184
Query: 216 XXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXX 275
+N + + PE + L+ L+ + + S L L+LG+N
Sbjct: 185 RWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPLTY 244
Query: 276 XXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
G + ++F+ +L L L+ N+L
Sbjct: 245 AGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRLHTLDLRGNQL 290
Score = 135 (52.6 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 56/249 (22%), Positives = 92/249 (36%)
Query: 120 EELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES 179
+ L + + + I F GVP L +L+L H + + + F+G+ L L L N +
Sbjct: 65 QRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRE 124
Query: 180 IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQEL 239
+P L LR L L N + +L P +N +V + F+ + +
Sbjct: 125 LPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRV 184
Query: 240 KTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPV 299
+ + L + P + L L L L +N+ N
Sbjct: 185 RWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPLTY 244
Query: 300 ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS 359
E+ + L+ L L L + AF + L LD+ N+LD L P
Sbjct: 245 AGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRLHTLDLRGNQLDTLPPLQ-GP--GQ 301
Query: 360 LRDLKISGN 368
LR L++ GN
Sbjct: 302 LRRLRLQGN 310
Score = 93 (37.8 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + +L+ L L RN+L +V T A L L+EL +S N L L +F
Sbjct: 554 GNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPLRALRDGAF 613
Query: 354 DPIENSLRDLKISGNNIQ 371
P+ SL+ L ++ + ++
Sbjct: 614 QPVGRSLQHLFLNSSGLE 631
Score = 92 (37.4 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 38/132 (28%), Positives = 55/132 (41%)
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNN 369
+L L L+RNR +V A L +L L + N +DRL +LR + +SGN
Sbjct: 498 RLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTR-ALRWVYLSGNR 556
Query: 370 IQXXXXXXXXXXXXXXXXXXIADMNYT-DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQ 428
I D N ++P G + P L L LSGN L+ + + +Q
Sbjct: 557 ITEVSLGALGPARELEKLHL--DRNQLREVPTGALEGLPALLELQLSGNPLRALRDGAFQ 614
Query: 429 S-NIKLTHLDLS 439
L HL L+
Sbjct: 615 PVGRSLQHLFLN 626
Score = 65 (27.9 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 34/150 (22%), Positives = 56/150 (37%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
NHFP + +F L L L+ +A++ A L LI L +S N+L L A+ +
Sbjct: 435 NHFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALE 494
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
L L + N + D + G L+++ L
Sbjct: 495 GAPR-LGYLYLERNRF-LQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYL 552
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
SGN + ++ +L L L RN+ +
Sbjct: 553 SGNRITEVSLGALGPARELEKLHLDRNQLR 582
Score = 58 (25.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 23/106 (21%), Positives = 39/106 (36%)
Query: 312 QVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
Q+L L+RN V AF L +L+ L + + + LE + + L L +S N +
Sbjct: 428 QLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAGL-GRLIYLYLSDNQL- 485
Query: 372 XXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
+ + +P + P L L+L N
Sbjct: 486 AGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDN 531
Score = 38 (18.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 394 NYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKG 445
++ +P+ F HL L+L + ++ +L +L LS N+ G
Sbjct: 436 HFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAG 487
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 149 (57.5 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 52/155 (33%), Positives = 75/155 (48%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
AS CP MC C + IV RG IP + TE+ ++ E+N ++ P
Sbjct: 274 ASGSCPPMCSCTNN------IVDCRGKGLTAIPANMPESMTEI-RL---EQN-GIKSVPP 322
Query: 112 -IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
F ++ L + ++N+ I I F G+ SL L L N IT L F G+ L+ L
Sbjct: 323 GAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKITDLPRGVFDGLSALELL 382
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+ NKI + +VF L +L +LSL N+I LA
Sbjct: 383 LLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLA 417
Score = 129 (50.5 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 36/107 (33%), Positives = 60/107 (56%)
Query: 103 NPNHLTI---GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDY 159
N N L+I +F+ HL++++++N+ I I F G S+ L+LT N + S+
Sbjct: 545 NNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGG 604
Query: 160 NFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
F+GM L+ L L N I + +S F L ++R+LSL N++S + P
Sbjct: 605 MFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQLSTIMP 651
Score = 118 (46.6 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 56/203 (27%), Positives = 80/203 (39%)
Query: 43 IFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEE 102
+ L L S S CP C C G + C G +P + TE L +
Sbjct: 18 LLLSLFLSGRSGACPPHCSCT----GS-TVDCH-GLAFKSVP-RNIPKTTERLDL----- 65
Query: 103 NPNHLT-IGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N+LT IG F +HL LH+ ++ I +I F + L L L N + L +
Sbjct: 66 NANNLTHIGKDDFAGLKHLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELL 125
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
F L L L N I+ IP F +D++ L L N IS +
Sbjct: 126 FLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEVLTL 185
Query: 221 XYNDIVEINPEIFKDIQELKTFK 243
N+I I F + +L+TF+
Sbjct: 186 NNNNISAIPISSFNHMPKLRTFR 208
Score = 118 (46.6 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
L+ L+L++N I+SL + +F M L L L +N + IP VF LS LR+LSL N IS
Sbjct: 785 LQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNALRCIPPLVFGGLSSLRLLSLHGNNIS 844
Query: 203 KL 204
+L
Sbjct: 845 EL 846
Score = 117 (46.2 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN F V + + S+ +LQ+L L N+++ +T T+FTN++ L L +SYN L + F
Sbjct: 769 GNVF-VSIPQELSAFRQLQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNALRCIPPLVF 827
Query: 354 DPIENSLRDLKISGNNI 370
+ +SLR L + GNNI
Sbjct: 828 GGL-SSLRLLSLHGNNI 843
Score = 107 (42.7 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 28/107 (26%), Positives = 47/107 (43%)
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND 224
+N+ ELYLD N SIP + L++L L++N+IS L YN
Sbjct: 760 LNVTELYLDGNVFVSIPQELSA-FRQLQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNA 818
Query: 225 IVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
+ I P +F + L+ + ++ ++ A L +L +G N
Sbjct: 819 LRCIPPLVFGGLSSLRLLSLHGNNISELHQQIFRDAASLSHLAIGAN 865
Score = 105 (42.0 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 92 TEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN 151
T + KI S + G F+ + ELH+T + + ++ F G+ LR L L +N
Sbjct: 562 THLKKINLSNNKITEIEDGA-FEGASSVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNN 620
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
+I + + +F G+ N++ L L N++ +I F L +L L+L N S
Sbjct: 621 HIRCVHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNLLANPFS 671
Score = 104 (41.7 bits), Expect = 6.3e-09, Sum P(3) = 6.3e-09
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L P +F + L L ++ + I I F G ++ L L N+I+ + D
Sbjct: 114 NRNRLQQLPELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGA 173
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ M L+ L L+ N I +IP S F H+ LR L N +
Sbjct: 174 FRAMRVLEVLTLNNNNISAIPISSFNHMPKLRTFRLHWNSL 214
Score = 92 (37.4 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 29/121 (23%), Positives = 50/121 (41%)
Query: 248 GLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS 307
G++++ P +S L +DL NQ GN + F
Sbjct: 316 GIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKITDLPRGVFDG 375
Query: 308 QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG 367
L++L L N++ V F +L NL L + NK+ L +F P++ S++ L ++
Sbjct: 376 LSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLK-SIQTLHLAQ 434
Query: 368 N 368
N
Sbjct: 435 N 435
Score = 85 (35.0 bits), Expect = 0.00042, Sum P(4) = 0.00042
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
++ E+ L+ N I+S+P F LR + L++N+IS++AP N I
Sbjct: 306 SMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKI 365
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F + L+ + + + ++ L +L L L N+
Sbjct: 366 TDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNK 412
Score = 74 (31.1 bits), Expect = 9.3e-09, Sum P(3) = 9.3e-09
Identities = 29/120 (24%), Positives = 51/120 (42%)
Query: 300 ILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
ILE + F L+ + L N++ ++ AF ++++EL ++ N L + F ++
Sbjct: 551 ILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMD 610
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
LR L + N+I+ + D + I G F P+L LNL N
Sbjct: 611 G-LRMLMLRNNHIRCVHNSSFSGLQNVRLLS-LYDNQLSTIMPGAFDSLPNLSTLNLLAN 668
Score = 72 (30.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 28/147 (19%), Positives = 60/147 (40%)
Query: 334 NLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADM 393
++ E+ + N + + +F + LR + +S N I +
Sbjct: 306 SMTEIRLEQNGIKSVPPGAFSSYKR-LRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGN- 363
Query: 394 NYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI- 452
TD+P+G+F L+ L L+ N + + ++Q L+ L L NK + + ++
Sbjct: 364 KITDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAP 423
Query: 453 MSEPKNIHKAAKNSFALQSSMGKNAEY 479
+ + +H A+N F + A++
Sbjct: 424 LKSIQTLH-LAQNPFVCDCGLKWLADF 449
Score = 71 (30.1 bits), Expect = 6.5e-11, Sum P(4) = 6.5e-11
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP +F L+ L+L GNN+ ++H +++ L+HL + N
Sbjct: 822 IPPLVFGGLSSLRLLSLHGNNISELHQQIFRDAASLSHLAIGAN 865
Score = 68 (29.0 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN--------KFKGFDEKSYI 452
GLF+ HL+ +NLS N + +I + ++ + L L+ N F+G D +
Sbjct: 556 GLFRPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMDGLRML 615
Query: 453 MSEPKNIHKAAKNSFA-LQS 471
M +I +SF+ LQ+
Sbjct: 616 MLRNNHIRCVHNSSFSGLQN 635
Score = 67 (28.6 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 27/128 (21%), Positives = 53/128 (41%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N + V AF++ L +D+S N++ + +F + SL L + GN I
Sbjct: 312 LEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLR-SLNSLVLYGNKITDLPR 370
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + + +F+ +L L+L N +Q + + +
Sbjct: 371 GVFDGLSALELLLLNANKIHC-VRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLKSIQT 429
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 430 LHLAQNPF 437
Score = 65 (27.9 bits), Expect = 6.5e-11, Sum P(4) = 6.5e-11
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
NH + SFS +++L L N+L+ + AF +L NL L++ N
Sbjct: 620 NHIRCVHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNLLAN 668
Score = 65 (27.9 bits), Expect = 1.2e-07, Sum P(4) = 1.2e-07
Identities = 21/109 (19%), Positives = 52/109 (47%)
Query: 165 MNLQELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
++ EL L+ N + + ++ +F L+ L+ ++L++N+I+++ N
Sbjct: 537 LSTTELRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLTAN 596
Query: 224 DIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
+V + +F+ + L+ R+ + ++ +S L ++ L L NQ
Sbjct: 597 LLVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQ 645
Score = 61 (26.5 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 29/131 (22%), Positives = 57/131 (43%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQX 372
L L N L+ + T F LT+L ++++S NK+ +E +F+ +S+ +L ++ N +
Sbjct: 542 LRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGA-SSVVELHLTAN-LLV 599
Query: 373 XXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIK 432
+ + + + F +++ L+L N L I + S
Sbjct: 600 SVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPN 659
Query: 433 LTHLDLSRNKF 443
L+ L+L N F
Sbjct: 660 LSTLNLLANPF 670
Score = 59 (25.8 bits), Expect = 1.2e-07, Sum P(4) = 1.2e-07
Identities = 18/75 (24%), Positives = 34/75 (45%)
Query: 77 GDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHP 136
G+ +P G D G L+++ N H +FQ ++L L + ++ I +
Sbjct: 362 GNKITDLPRGVFD-GLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGT 420
Query: 137 FWGVPSLRYLNLTHN 151
F + S++ L+L N
Sbjct: 421 FAPLKSIQTLHLAQN 435
Score = 54 (24.1 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 20/74 (27%), Positives = 29/74 (39%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF++ +L L L N L + F L++L L + N + L F
Sbjct: 793 NKISSLTNTSFTNMSQLTTLILSYNALRCIPPLVFGGLSSLRLLSLHGNNISELHQQIFR 852
Query: 355 PIENSLRDLKISGN 368
SL L I N
Sbjct: 853 DAA-SLSHLAIGAN 865
Score = 53 (23.7 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+L+ +DLS N I EI P+ F ++ L
Sbjct: 330 RLRRIDLSNNQISEIAPDAFHGLRSLNSL 358
Score = 47 (21.6 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 20/92 (21%), Positives = 29/92 (31%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L LDL N+ N I F L++
Sbjct: 776 PQELSAFRQLQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNALRCIPPLVFGGLSSLRL 835
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++++ F + +L L I N L
Sbjct: 836 LSLHGNNISELHQQIFRDAASLSHLAIGANPL 867
Score = 41 (19.5 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+S L+ L L+ N I + +F+D+++ ++L
Sbjct: 376 LSALELLLLNANKIHCVRVNVFQDLENLSLL 406
Score = 41 (19.5 bits), Expect = 1.5e-08, Sum P(4) = 1.5e-08
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N I + +F + L L N L V F + L L + N + + +SF
Sbjct: 572 NKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFS 631
Query: 355 PIENSLRDLKISGNNI 370
++N +R L + N +
Sbjct: 632 GLQN-VRLLSLYDNQL 646
Score = 40 (19.1 bits), Expect = 7.3e-08, Sum P(4) = 7.3e-08
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI-MSE 455
+P+G+ +N + L L GN I L +L LDLS NK S+ MS+
Sbjct: 754 LPRGV-PLN--VTELYLDGNVFVSIPQELSAFR-QLQLLDLSNNKISSLTNTSFTNMSQ 808
Score = 39 (18.8 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 5 LIFMSK--LKSLDLSYNDIVEINPEIFKDIQD 34
L+F+ L LDLS N+I I F+ D
Sbjct: 124 LLFLKNPALSRLDLSENNIQMIPRRAFRGATD 155
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 142 (55.0 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 48/156 (30%), Positives = 75/156 (48%)
Query: 51 SASVM-CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S SV+ CP C C+ + IV RG IP + TE+ ++ E+N +
Sbjct: 267 SCSVLHCPAACTCSNN------IVDCRGKGLTEIPTNLPETITEI-RL---EQNTIKVIP 316
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F ++ L + ++N+ I + F G+ SL L L N IT L F+G+ +LQ
Sbjct: 317 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQL 376
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L+ NKI + F L +L +LSL N++ +A
Sbjct: 377 LLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 412
Score = 141 (54.7 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 45/177 (25%), Positives = 79/177 (44%)
Query: 43 IFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDL-GTEVLKIVPSE 101
+ L +L+ A CP C C+ + + R P ++DL G + +I ++
Sbjct: 15 LVLAILNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTD 74
Query: 102 -ENPNHLTIGPI------------FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNL 148
HL + + FQ + LE L + + + F G L L+L
Sbjct: 75 FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDL 134
Query: 149 THNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ N I ++ F+G ++++ L LD+N+I I F L DL VL+L +N I++L+
Sbjct: 135 SENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Score = 132 (51.5 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A + CP C C G + C + N IP + T L++ +E T G
Sbjct: 502 ADLACPEKCRC----EGT-TVDCSNQKL-NKIP-EHIPQYTAELRLNNNEFTVLEAT-G- 552
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF++ L +++ +N+ I I F G + + LT N + ++ FKG+ +L+ L
Sbjct: 553 IFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 612
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L N+I + + F+ LS +R+LSL N+I+ +AP
Sbjct: 613 LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAP 647
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 34/128 (26%), Positives = 57/128 (44%)
Query: 117 QHLEELHITNS---FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ EL + N+ + A G F +P LR +N ++N IT + + F+G + E+ L
Sbjct: 533 QYTAELRLNNNEFTVLEATGI--FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 590
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E++ +F L L+ L L NRI+ + N I + P F
Sbjct: 591 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF 650
Query: 234 KDIQELKT 241
+ L T
Sbjct: 651 DTLHSLST 658
Score = 118 (46.6 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN F ++ K S+ L ++ L NR++ ++ +F+N+T L+ L +SYN+L + +F
Sbjct: 763 GNQFTLV-PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 821
Query: 354 DPIENSLRDLKISGNNI 370
D ++ SLR L + GN+I
Sbjct: 822 DGLK-SLRLLSLHGNDI 837
Score = 103 (41.3 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 31/147 (21%), Positives = 64/147 (43%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ E L + + I I F G+ LR L L N I+++ F+ + L+ L L+ N
Sbjct: 55 RNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNH 114
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ P +F+ + L L L+ N+I + + YN I I F+ +
Sbjct: 115 LQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 237 QELKTFKCRSCGLENINPMMYSILADL 263
++L+ + + ++ ++ + L
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKL 201
Score = 97 (39.2 bits), Expect = 7.0e-08, Sum P(3) = 7.0e-08
Identities = 33/126 (26%), Positives = 49/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L NNIT + +F G+ +L+ L L NKI +I F L +L L L N +
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I I + F+ ++K + + I + L DL
Sbjct: 120 ELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEV 179
Query: 266 LDLGYN 271
L L N
Sbjct: 180 LTLNNN 185
Score = 93 (37.8 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 29/117 (24%), Positives = 48/117 (41%)
Query: 252 INPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKL 311
I P +S L +DL NQ GN + + F F L
Sbjct: 315 IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSL 374
Query: 312 QVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
Q+L L N++ + AF +L NL L + NKL + +F P+ +++ + ++ N
Sbjct: 375 QLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR-AIQTMHLAQN 430
Score = 85 (35.0 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+ IP F LR + L++N+IS+LAP N I
Sbjct: 302 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
E+ +F+ + L+ + IN + DL L+L
Sbjct: 362 ELPKSLFEGLFSLQLLLLNA---NKINCLRVDAFQDLHNLNL 400
Score = 81 (33.6 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + E+ +T++ + + F G+ SL+ L L N IT + + +F G+ +++ L L
Sbjct: 578 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSL 637
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHN 199
N+I ++ F L L L+L N
Sbjct: 638 YDNQITTVAPGAFDTLHSLSTLNLLAN 664
Score = 78 (32.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 35/152 (23%), Positives = 61/152 (40%)
Query: 330 TNLTNLI-ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
TNL I E+ + N + + +F P + LR + +S N I
Sbjct: 296 TNLPETITEIRLEQNTIKVIPPGAFSPYKK-LRRIDLSNNQISELAPDAFQGLRSLNSLV 354
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
+ T++PK LF+ LQ L L+ N + + +Q L L L NK + +
Sbjct: 355 LYGN-KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 413
Query: 449 KSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
++ + + +H A+N F + A+Y
Sbjct: 414 GTFSPLRAIQTMH-LAQNPFICDCHLKWLADY 444
Score = 75 (31.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N VI +FS KL+ + L N+++++ AF L +L L + NK+ L + F+
Sbjct: 310 NTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFE 369
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ SL+ L ++ N I + D I KG F +Q ++L
Sbjct: 370 GLF-SLQLLLLNANKINCLRVDAFQDLHNLNLLS-LYDNKLQTIAKGTFSPLRAIQTMHL 427
Query: 415 SGNN-LQDIH 423
+ N + D H
Sbjct: 428 AQNPFICDCH 437
Score = 71 (30.1 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+ + ++ +F L LR ++ ++N+I+ + N +
Sbjct: 537 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 596
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
+ ++FK ++ LKT RS + + + L+ + L L NQ
Sbjct: 597 VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 641
Score = 70 (29.7 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 29/125 (23%), Positives = 50/125 (40%)
Query: 295 NHFPVILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N F V LE + F +L+ + N++ + AF + + E+ ++ N+L+ ++
Sbjct: 543 NEFTV-LEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKM 601
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
F +E SL+ L + N I + D T + G F L L
Sbjct: 602 FKGLE-SLKTLMLRSNRI-TCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTL 659
Query: 413 NLSGN 417
NL N
Sbjct: 660 NLLAN 664
Score = 67 (28.6 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQ-----SNIKLT--HLDLSRNK-FKGFDEKSYI 452
G+FK P L+ +N S N + DI ++ + I LT L+ ++K FKG + +
Sbjct: 552 GIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 611
Query: 453 MSEPKNIHKAAKNSFALQSSM 473
M I +SF SS+
Sbjct: 612 MLRSNRITCVGNDSFIGLSSV 632
Score = 66 (28.3 bits), Expect = 7.9e-08, Sum P(3) = 7.9e-08
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + +SFS+ +L L L NRL + F L +L L + N + + +F+
Sbjct: 787 NRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFN 846
Query: 355 PIENSLRDLKISGN 368
+ ++L L I N
Sbjct: 847 DL-SALSHLAIGAN 859
Score = 62 (26.9 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
+T +PK L HL ++LS N + + N + + +L L LS N+ + +++
Sbjct: 766 FTLVPKELSNYK-HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 821
Score = 62 (26.9 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 27/126 (21%), Positives = 44/126 (34%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N I + F L+ + L N+I + F L L L L N+I++L
Sbjct: 305 IRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP 364
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I + + F+D+ L L+ I +S L +
Sbjct: 365 KSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQT 424
Query: 266 LDLGYN 271
+ L N
Sbjct: 425 MHLAQN 430
Score = 61 (26.5 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
L++N + + AF+ L +D+S N++ L +F + SL L + GN I
Sbjct: 307 LEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLR-SLNSLVLYGNKI 360
Score = 61 (26.5 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 25/124 (20%), Positives = 44/124 (35%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L L +N T L FK + L+++ NKI I F S + + L NR+ +
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 597
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
+ N I + + F + ++ + + P + L L
Sbjct: 598 QHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLS 657
Query: 265 YLDL 268
L+L
Sbjct: 658 TLNL 661
Score = 60 (26.2 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 24/88 (27%), Positives = 35/88 (39%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
LGT L + EN F+ ++ L + + I I F + L L L
Sbjct: 124 LGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLN 183
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKI 177
+NNIT L +F M L+ L N +
Sbjct: 184 NNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 56 (24.8 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I E+ P+ F+ ++ L
Sbjct: 325 KLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Score = 55 (24.4 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 21/115 (18%), Positives = 46/115 (40%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
+D S KL+++ + I +L+++ N ++ TD
Sbjct: 517 VDCSNQKLNKIP----EHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD 572
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI 452
I +G F+ + + L+ N L+++ + +++ L L L N+ S+I
Sbjct: 573 IEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFI 627
Score = 55 (24.4 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 22/92 (23%), Positives = 32/92 (34%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I ++F L++
Sbjct: 770 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRL 829
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V AF +L+ L L I N L
Sbjct: 830 LSLHGNDISVVPEGAFNDLSALSHLAIGANPL 861
Score = 49 (22.3 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 25/143 (17%), Positives = 50/143 (34%)
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ IP+++ ++++R L N I + P N I E+ P+ F+ +
Sbjct: 291 LTEIPTNLPETITEIR---LEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL 347
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
+ L + + + ++ L L L L N+ N
Sbjct: 348 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNK 407
Query: 297 FPVILEKSFSSQFKLQVLCLKRN 319
I + +FS +Q + L +N
Sbjct: 408 LQTIAKGTFSPLRAIQTMHLAQN 430
Score = 45 (20.9 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
+K+L L YN I I F+ ++D +L
Sbjct: 153 IKNLQLDYNQISCIEDGAFRALRDLEVL 180
Score = 44 (20.5 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L+L GN++ + + L+HL + N
Sbjct: 816 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 859
Score = 43 (20.2 bits), Expect = 7.5e-13, Sum P(3) = 7.5e-13
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 5 LIFM--SKLKSLDLSYNDIVEINPEIFKDIQD 34
L+F+ +KL LDLS N I I + F+ D
Sbjct: 121 LLFLGTAKLYRLDLSENQIQAIPRKAFRGAVD 152
Score = 43 (20.2 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 17/92 (18%), Positives = 32/92 (34%)
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
P+ + + L + + ++ +S + L+ L L YN+
Sbjct: 770 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRL 829
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
GN V+ E +F+ L L + N L
Sbjct: 830 LSLHGNDISVVPEGAFNDLSALSHLAIGANPL 861
Score = 42 (19.8 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 22/121 (18%), Positives = 40/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + + P + L L L L N+
Sbjct: 310 NTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFE 369
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L + F+ L + + ++
Sbjct: 370 GLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQ 429
Query: 343 N 343
N
Sbjct: 430 N 430
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 136 (52.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 45/153 (29%), Positives = 74/153 (48%)
Query: 53 SVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPI 112
S+ CP C C+ + IV RG IP +L +++I + + + G
Sbjct: 91 SISCPSACTCSNN------IVDCRGKGLTEIPA---NLPEGIVEIRLEQNSIKSIPAGA- 140
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F Q++ L+ + I+ + I I F G+ SL L L N IT + F G+++LQ L L
Sbjct: 141 FTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLL 200
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ NKI + + F L L +LSL N++ ++
Sbjct: 201 NANKINCLRVNTFQDLQSLSLLSLYDNKLQTIS 233
Score = 133 (51.9 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 44/153 (28%), Positives = 77/153 (50%)
Query: 54 VMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIF 113
++CP C C G + C +A IP + T+ L++ +E + T G IF
Sbjct: 317 LVCPDRCRC----EGTI-VDCSNQKLAR-IPSHLPEYVTD-LRLNDNEISVLEAT-G-IF 367
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
++ +L +++++N+ I + F G S++ L LT N + + F+G+ L+ L L
Sbjct: 368 KKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLR 427
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N I + + F LS +R+LSL NRI+ + P
Sbjct: 428 SNLISCVSNDTFAGLSSVRLLSLYDNRITTITP 460
Score = 120 (47.3 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 42/143 (29%), Positives = 62/143 (43%)
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P+HL P + L + I S + A G F +P+LR +NL++N I + + F G
Sbjct: 341 PSHL---PEYVTDLRLNDNEI--SVLEATGI--FKKLPNLRKINLSNNRIKEVKEGAFDG 393
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
++QEL L N++E+ F LS L+ L L N IS ++ N
Sbjct: 394 AASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDN 453
Query: 224 DIVEINPEIFKDIQELKTFKCRS 246
I I P F + L T S
Sbjct: 454 RITTITPGAFTTLVSLSTINLLS 476
Score = 110 (43.8 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + K SS L ++ L N + +T F+N+++L L +SYN+L + V SF
Sbjct: 575 GNHLTAV-PKELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSF 633
Query: 354 DPIENSLRDLKISGNNI 370
+ + SLR L + GN+I
Sbjct: 634 NGLR-SLRVLTLHGNDI 649
Score = 103 (41.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
E+ + + I +I F L+ ++++ N I+ + F+G+ +L L L NKI I
Sbjct: 125 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 184
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
P +F L L++L L N+I+ L N + I+ +F +Q ++
Sbjct: 185 PKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQ 244
Query: 241 T 241
T
Sbjct: 245 T 245
Score = 84 (34.6 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 26/100 (26%), Positives = 42/100 (42%)
Query: 169 ELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI 228
E+ L+ N I+SIP+ F L+ + ++ N+IS +AP N I EI
Sbjct: 125 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 184
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
+F + L+ + IN + + DL L L
Sbjct: 185 PKGLFDGLVSLQLLLLNA---NKINCLRVNTFQDLQSLSL 221
Score = 74 (31.1 bits), Expect = 5.9e-07, Sum P(3) = 5.9e-07
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
++EL +T + + F G+ L+ L L N I+ + + F G+ +++ L L N+I
Sbjct: 397 VQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRIT 456
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
+I F L L ++L N
Sbjct: 457 TITPGAFTTLVSLSTINLLSN 477
Score = 72 (30.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 28/126 (22%), Positives = 48/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N+I S+ F L+ + + N+I I F L L L L N+I+++
Sbjct: 126 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 185
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I + F+D+Q L L+ I+ +++ L +
Sbjct: 186 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQT 245
Query: 266 LDLGYN 271
L L N
Sbjct: 246 LHLAQN 251
Score = 70 (29.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 25/131 (19%), Positives = 59/131 (45%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQX 372
L L N ++ + T F L NL ++++S N++ ++ +FD S+++L ++GN ++
Sbjct: 351 LRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAA-SVQELVLTGNQLET 409
Query: 373 XXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIK 432
+++ + + F ++ L+L N + I + + +
Sbjct: 410 AHGRAFRGLSGLKTLMLRSNL-ISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 468
Query: 433 LTHLDLSRNKF 443
L+ ++L N F
Sbjct: 469 LSTINLLSNPF 479
Score = 68 (29.0 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 23/105 (21%), Positives = 49/105 (46%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
+L L+ N+I + ++ +F L +LR ++L++NRI ++ N +
Sbjct: 350 DLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLET 409
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
+ F+ + LKT RS + ++ ++ L+ + L L N+
Sbjct: 410 AHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNR 454
Score = 68 (29.0 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 26/125 (20%), Positives = 51/125 (40%)
Query: 146 LNLTHNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
L L N I S+L+ FK + NL+++ L N+I+ + F + ++ L L N++
Sbjct: 351 LRLNDNEI-SVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLET 409
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
R N I ++ + F + ++ + I P ++ L L
Sbjct: 410 AHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSL 469
Query: 264 IYLDL 268
++L
Sbjct: 470 STINL 474
Score = 64 (27.6 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 22/112 (19%), Positives = 42/112 (37%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
IFK + L+ + ++ + + A + L L NQ
Sbjct: 366 IFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLM 425
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N + +F+ +++L L NR+ +T AFT L +L +++ N
Sbjct: 426 LRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 477
Score = 62 (26.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK--------FKGFDEKSYI 452
G+FK P+L+ +NLS N ++++ + + L L+ N+ F+G +
Sbjct: 365 GIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTL 424
Query: 453 MSEPKNIHKAAKNSFALQSSM 473
M I + ++FA SS+
Sbjct: 425 MLRSNLISCVSNDTFAGLSSV 445
Score = 62 (26.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 28/120 (23%), Positives = 47/120 (39%)
Query: 300 ILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+LE + F L+ + L NR+ +V AF ++ EL ++ N+L+ +F +
Sbjct: 360 VLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGL- 418
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
+ L+ L + N I + D T I G F L +NL N
Sbjct: 419 SGLKTLMLRSNLISCVSNDTFAGLSSVRLLS-LYDNRITTITPGAFTTLVSLSTINLLSN 477
Score = 61 (26.5 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KLK +D+S N I +I P+ F+ ++ T L
Sbjct: 146 KLKRIDISKNQISDIAPDAFQGLKSLTSL 174
Score = 60 (26.2 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N ++ +FS+ L L L NRL + +F L +L L + N + + SF+
Sbjct: 599 NSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFN 658
Query: 355 PIENSLRDL 363
+ SL L
Sbjct: 659 DL-TSLSHL 666
Score = 58 (25.5 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 396 TDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
T +PK L HL ++LS N++ + N + + L+ L LS N+ +
Sbjct: 579 TAVPKELSSFR-HLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLR 626
Score = 56 (24.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 24/104 (23%), Positives = 41/104 (39%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
+D S KL R + S P + DL+++ N I +++ +
Sbjct: 330 VDCSNQKLAR--IPSHLP--EYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKE 385
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ +G F +Q L L+GN L+ H ++ L L L N
Sbjct: 386 VKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSN 429
Score = 53 (23.7 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 16/75 (21%), Positives = 34/75 (45%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN ++F L+ L L+ N ++ V+ F L+++ L + N++ + +F
Sbjct: 404 GNQLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 463
Query: 354 DPIENSLRDLKISGN 368
+ SL + + N
Sbjct: 464 TTLV-SLSTINLLSN 477
Score = 42 (19.8 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 148 LTHNNITSLLDYNFKGMMNLQELYLDFNKI 177
L +NNI+ +L +F M ++ L L N +
Sbjct: 2 LNNNNISRILVTSFNHMPKIRTLRLHSNHL 31
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHL 436
IP F L+ L L GN++ + + L+HL
Sbjct: 628 IPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 666
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 143 (55.4 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 46/184 (25%), Positives = 81/184 (44%)
Query: 36 TMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDL-GTEV 94
T+ + + L +L+ A CP C C+ + + R P ++DL G +
Sbjct: 8 TLSLSLGLVLAILNEVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNI 67
Query: 95 LKIVPSE-ENPNHLTIGPI------------FQQFQHLEELHITNSFIPAIGFHPFWGVP 141
+I ++ HL + + FQ + LE L + + + F G
Sbjct: 68 TRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTS 127
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
L L+L+ N I ++ F+G ++++ L LD+N I I F L DL VL+L +N I
Sbjct: 128 KLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNI 187
Query: 202 SKLA 205
++L+
Sbjct: 188 TRLS 191
Score = 138 (53.6 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 47/154 (30%), Positives = 74/154 (48%)
Query: 53 SVM-CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
SV+ CP C C+ + IV RG IP + TE+ ++ E+N +
Sbjct: 271 SVLHCPAACTCSNN------IVDCRGKGLTEIPTNLPETITEI-RL---EQNSIKVIPPG 320
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
F ++ L + ++N+ I + F G+ SL L L N IT L F+G+ +LQ L
Sbjct: 321 AFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLL 380
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+ NKI + F L +L +LSL N++ +A
Sbjct: 381 LNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 414
Score = 130 (50.8 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 36/128 (28%), Positives = 57/128 (44%)
Query: 117 QHLEELHITNS---FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ EL + N+ + A G F +P LR +N ++N IT + + F+G + E+ L
Sbjct: 535 QYTAELRLNNNEFTVLEATGI--FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 592
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E++ +F L L+ L L NRIS + N I I P F
Sbjct: 593 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAF 652
Query: 234 KDIQELKT 241
+ L T
Sbjct: 653 DTLHSLST 660
Score = 130 (50.8 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 44/155 (28%), Positives = 75/155 (48%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A + CP C C G + C + IP + T L++ +E T G
Sbjct: 504 ADLACPEKCRC----EGT-TVDCSNQKLTK-IP-DHIPQYTAELRLNNNEFTVLEAT-G- 554
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF++ L +++ +N+ I I F G + + LT N + ++ FKG+ +L+ L
Sbjct: 555 IFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 614
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L N+I + + F+ LS +R+LSL N+I+ +AP
Sbjct: 615 LRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAP 649
Score = 118 (46.6 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN F ++ K S+ L ++ L NR++ ++ +F+N+T L+ L +SYN+L + +F
Sbjct: 765 GNQFTLV-PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 823
Query: 354 DPIENSLRDLKISGNNI 370
D ++ SLR L + GN+I
Sbjct: 824 DGLK-SLRLLSLHGNDI 839
Score = 109 (43.4 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 30/101 (29%), Positives = 50/101 (49%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N NHL + P +F L L ++ + I AI F G ++ L L +N+I+ + D
Sbjct: 111 NRNHLQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGA 170
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + +L+ L L+ N I + + F H+ LR L N +
Sbjct: 171 FRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 109 (43.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 33/147 (22%), Positives = 64/147 (43%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ E L + + I I F G+ LR L L N IT++ F+ + L+ L L+ N
Sbjct: 55 RNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNH 114
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ P +F+ S L L L+ N+I + + YN I I F+ +
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRAL 174
Query: 237 QELKTFKCRSCGLENINPMMYSILADL 263
++L+ + + ++ ++ + L
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKL 201
Score = 94 (38.1 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 33/139 (23%), Positives = 57/139 (41%)
Query: 231 EIFKDIQELKT-FKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
EI ++ E T + ++ I P +S L +DL NQ
Sbjct: 295 EIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS 354
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
GN + + F F LQ+L L N++ + AF +L NL L + NKL +
Sbjct: 355 LVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 414
Query: 350 VASFDPIENSLRDLKISGN 368
+F P+ +++ + ++ N
Sbjct: 415 KGTFSPLR-AIQTMHLAQN 432
Score = 86 (35.3 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I+ IP F LR + L++N+IS+LAP N I
Sbjct: 304 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 363
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
E+ +F+ + L+ + IN + DL L+L
Sbjct: 364 ELPKSLFEGLFSLQLLLLNA---NKINCLRVDAFQDLHNLNL 402
Score = 79 (32.9 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 35/152 (23%), Positives = 61/152 (40%)
Query: 330 TNLTNLI-ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
TNL I E+ + N + + +F P + LR + +S N I
Sbjct: 298 TNLPETITEIRLEQNSIKVIPPGAFSPYKK-LRRIDLSNNQISELAPDAFQGLRSLNSLV 356
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
+ T++PK LF+ LQ L L+ N + + +Q L L L NK + +
Sbjct: 357 LYGN-KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 415
Query: 449 KSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
++ + + +H A+N F + A+Y
Sbjct: 416 GTFSPLRAIQTMH-LAQNPFICDCHLKWLADY 446
Score = 78 (32.5 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + E+ +T++ + + F G+ SL+ L L N I+ + + +F G+ +++ L L
Sbjct: 580 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSL 639
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHN 199
N+I +I F L L L+L N
Sbjct: 640 YDNQITTIAPGAFDTLHSLSTLNLLAN 666
Score = 72 (30.4 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+ + ++ +F L LR ++ ++N+I+ + N +
Sbjct: 539 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 598
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
+ ++FK ++ LKT RS + + + L+ + L L NQ
Sbjct: 599 VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQ 643
Score = 71 (30.1 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 30/125 (24%), Positives = 50/125 (40%)
Query: 295 NHFPVILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N F V LE + F +L+ + N++ + AF + + E+ ++ N+L+ ++
Sbjct: 545 NEFTV-LEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKM 603
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
F +E SL+ L + N I + D T I G F L L
Sbjct: 604 FKGLE-SLKTLMLRSNRISCVGNDSFIGLSSVRLLS-LYDNQITTIAPGAFDTLHSLSTL 661
Query: 413 NLSGN 417
NL N
Sbjct: 662 NLLAN 666
Score = 68 (29.0 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQ-----SNIKLT--HLDLSRNK-FKGFDEKSYI 452
G+FK P L+ +N S N + DI ++ + I LT L+ ++K FKG + +
Sbjct: 554 GIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 613
Query: 453 MSEPKNIHKAAKNSFALQSSM 473
M I +SF SS+
Sbjct: 614 MLRSNRISCVGNDSFIGLSSV 634
Score = 64 (27.6 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + +SFS+ +L L L NRL + F L +L L + N + + +F+
Sbjct: 789 NRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFN 848
Query: 355 PIENSLRDLKISGN 368
+ +L L I N
Sbjct: 849 DLA-ALSHLAIGAN 861
Score = 63 (27.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 24/88 (27%), Positives = 35/88 (39%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
LGT L + EN F+ ++ L + + I I F + L L L
Sbjct: 124 LGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLN 183
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKI 177
+NNIT L +F M L+ L N +
Sbjct: 184 NNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 62 (26.9 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
+T +PK L HL ++LS N + + N + + +L L LS N+ + +++
Sbjct: 768 FTLVPKELSNYK-HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 823
Score = 60 (26.2 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 26/124 (20%), Positives = 44/124 (35%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L L +N T L FK + L+++ NKI I F S + + L NR+ +
Sbjct: 540 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 599
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
+ N I + + F + ++ + I P + L L
Sbjct: 600 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLS 659
Query: 265 YLDL 268
L+L
Sbjct: 660 TLNL 663
Score = 56 (24.8 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I E+ P+ F+ ++ L
Sbjct: 327 KLRRIDLSNNQISELAPDAFQGLRSLNSL 355
Score = 54 (24.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 22/92 (23%), Positives = 31/92 (33%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I ++F L++
Sbjct: 772 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRL 831
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V AF +L L L I N L
Sbjct: 832 LSLHGNDISVVPEGAFNDLAALSHLAIGANPL 863
Score = 49 (22.3 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 25/143 (17%), Positives = 50/143 (34%)
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ IP+++ ++++R L N I + P N I E+ P+ F+ +
Sbjct: 293 LTEIPTNLPETITEIR---LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL 349
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
+ L + + + ++ L L L L N+ N
Sbjct: 350 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNK 409
Query: 297 FPVILEKSFSSQFKLQVLCLKRN 319
I + +FS +Q + L +N
Sbjct: 410 LQTIAKGTFSPLRAIQTMHLAQN 432
Score = 46 (21.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 5 LIFM--SKLKSLDLSYNDIVEINPEIFKDIQD 34
L+F+ SKL LDLS N I I + F+ D
Sbjct: 121 LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVD 152
Score = 45 (20.9 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L+L GN++ + + L+HL + N
Sbjct: 818 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGAN 861
Score = 45 (20.9 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 30/145 (20%), Positives = 45/145 (31%)
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKL-APRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
K+ IP + + ++LR L +N + L A N I +I F+
Sbjct: 525 KLTKIPDHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFE 581
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
+ S LEN+ M+ L L L L N+
Sbjct: 582 GASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYD 641
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRN 319
N I +F + L L L N
Sbjct: 642 NQITTIAPGAFDTLHSLSTLNLLAN 666
Score = 44 (20.5 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
+K+L L YN I I F+ ++D +L
Sbjct: 153 IKNLQLDYNHISCIEDGAFRALRDLEVL 180
Score = 43 (20.2 bits), Expect = 6.6e-08, Sum P(3) = 6.6e-08
Identities = 22/121 (18%), Positives = 40/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + + P + L L L L N+
Sbjct: 312 NSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFE 371
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L + F+ L + + ++
Sbjct: 372 GLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQ 431
Query: 343 N 343
N
Sbjct: 432 N 432
Score = 43 (20.2 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 17/92 (18%), Positives = 32/92 (34%)
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
P+ + + L + + ++ +S + L+ L L YN+
Sbjct: 772 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRL 831
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
GN V+ E +F+ L L + N L
Sbjct: 832 LSLHGNDISVVPEGAFNDLAALSHLAIGANPL 863
>ZFIN|ZDB-GENE-050506-80 [details] [associations]
symbol:lrrtm1 "leucine rich repeat transmembrane
neuronal 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-050506-80 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CU076051 CTD:347730
HOGENOM:HOG000290681 HOVERGEN:HBG052362 KO:K16665 OMA:EPDLFHG
IPI:IPI00493041 RefSeq:XP_003197743.1 UniGene:Dr.12811
ProteinModelPortal:B8JKM0 IntAct:B8JKM0 Ensembl:ENSDART00000133917
GeneID:570385 KEGG:dre:570385 NextBio:20890105 ArrayExpress:B8JKM0
Bgee:B8JKM0 Uniprot:B8JKM0
Length = 524
Score = 201 (75.8 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 57/225 (25%), Positives = 92/225 (40%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L NNI+ L + NF G+ L LYLD N IE + S F L ++ L L+ NRI L
Sbjct: 72 LSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTNRIESLP 131
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN + + P++F +++L R L+ I ++ + +
Sbjct: 132 NGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQF 191
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LDLGYNQ N + F L+ L ++ N+ V
Sbjct: 192 LDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKATIVV 251
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
T L ++D S N+++ +E F+ + L L + N +
Sbjct: 252 NTLEWTWDYLEKIDFSNNEIEYIEPHVFESVPK-LNTLMLDSNKL 295
Score = 176 (67.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 55/233 (23%), Positives = 99/233 (42%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G+ L +L L HNNI + + F+ + ++EL L N+IES+P+ F L +LR+L L
Sbjct: 87 FVGLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTNRIESLPNGTFRPLPNLRILDL 146
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
++NR+ L P YN + I IF+D + ++ L+++
Sbjct: 147 SYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYNQLQSLARNS 206
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
++ L L L L +N+ N +++ + L+ +
Sbjct: 207 FAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKATIVVNTLEWTWDYLEKIDF 266
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNN 369
N + + F ++ L L + NKL ++ D SL + +SGN+
Sbjct: 267 SNNEIEYIEPHVFESVPKLNTLMLDSNKLTYIDQRILDSW-TSLSSITLSGND 318
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 34/134 (25%), Positives = 69/134 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F++ + ++EL ++ + I ++ F +P+LR L+L++N + SL F G+ L L+L
Sbjct: 111 FERLRRIKELDLSTNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHL 170
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
+N ++ IP +F ++ L L +N++ LA +N++V++N
Sbjct: 171 RYNALKFIPVRIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAH 230
Query: 233 FKDIQELKTFKCRS 246
F + L+T R+
Sbjct: 231 FPRLISLRTLYMRN 244
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 63/277 (22%), Positives = 104/277 (37%)
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
++LY + + IP + LS LSL N IS+L +N+I
Sbjct: 50 KQLYCEGLNLTDIPQN----LSSAIGLSLRENNISELREGNFVGLSQLTWLYLDHNNIEI 105
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXX 287
+ F+ ++ +K + +E++ + L +L LDL YN+
Sbjct: 106 VEESAFERLRRIKELDLSTNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKL 165
Query: 288 XXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDR 347
N I + F +Q L L N+L + +F L L EL + +N+L +
Sbjct: 166 TNLHLRYNALKFIPVRIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVK 225
Query: 348 LEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNP 407
+ +A F P SLR L + NN ++ I +F+ P
Sbjct: 226 VNLAHF-PRLISLRTLYMR-NNKATIVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFESVP 283
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
L L L N L I + S L+ + LS N ++
Sbjct: 284 KLNTLMLDSNKLTYIDQRILDSWTSLSSITLSGNDWE 320
Score = 132 (51.5 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 38/160 (23%), Positives = 70/160 (43%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F + L LH+ + + I F S+++L+L +N + SL +F G+ L EL+
Sbjct: 158 LFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELH 217
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L+ N++ + + F L LR L + +N+ + + N+I I P
Sbjct: 218 LEHNELVKVNLAHFPRLISLRTLYMRNNKATIVVNTLEWTWDYLEKIDFSNNEIEYIEPH 277
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
+F+ + +L T S L I+ + L + L N
Sbjct: 278 VFESVPKLNTLMLDSNKLTYIDQRILDSWTSLSSITLSGN 317
Score = 39 (18.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+ ++K LDLS N I + F+ + + +L
Sbjct: 114 LRRIKELDLSTNRIESLPNGTFRPLPNLRIL 144
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 142 (55.0 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 46/153 (30%), Positives = 75/153 (49%)
Query: 53 SVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPI 112
S+ CP C C+ + IV RG IP +L +++I + + + G
Sbjct: 74 SISCPSACTCSNN------IVDCRGKGLTEIPA---NLPEGIVEIRLEQNSIKSIPAGA- 123
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F Q++ L+ + I+ + I I F G+ SL L L N IT L F G+++LQ L L
Sbjct: 124 FTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELAKGLFDGLVSLQLLLL 183
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ NKI + + F L +L +LSL N++ ++
Sbjct: 184 NANKINCLRVNTFQDLQNLNLLSLYDNKLQTIS 216
Score = 137 (53.3 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 44/153 (28%), Positives = 79/153 (51%)
Query: 54 VMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIF 113
++CP C C G + C +A IP + T+ L++ +E + T G IF
Sbjct: 300 LVCPEKCRC----EGTI-VDCSNQKLAR-IPSHLPEYVTD-LRLNDNEISVLEAT-G-IF 350
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
++ +L +++++N+ I + F G S++ L LT N + ++ F+G+ +L+ L L
Sbjct: 351 KKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLR 410
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N I + + F LS +R+LSL NRI+ + P
Sbjct: 411 SNLITCVSNDTFAGLSSVRLLSLYDNRITTITP 443
Score = 123 (48.4 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 41/143 (28%), Positives = 64/143 (44%)
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P+HL P + L + I S + A G F +P+LR +NL++N I + + F G
Sbjct: 324 PSHL---PEYVTDLRLNDNEI--SVLEATGI--FKKLPNLRKINLSNNKIKEVREGAFDG 376
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
++QEL L N++E++ +F LS L+ L L N I+ ++ N
Sbjct: 377 AASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDN 436
Query: 224 DIVEINPEIFKDIQELKTFKCRS 246
I I P F + L T S
Sbjct: 437 RITTITPGAFTTLVSLSTINLLS 459
Score = 105 (42.0 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + + S+ L ++ L N + +T F+N+++L L +SYN+L + + +F
Sbjct: 558 GNHLTAV-PRELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAF 616
Query: 354 DPIENSLRDLKISGNNI 370
D + SLR L + GN+I
Sbjct: 617 DGLR-SLRVLTLHGNDI 632
Score = 91 (37.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 28/121 (23%), Positives = 54/121 (44%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
E+ + + I +I F L+ ++++ N I+ + F+G+ +L L L NKI +
Sbjct: 108 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEL 167
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
+F L L++L L N+I+ L N + I+ +F +Q ++
Sbjct: 168 AKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQ 227
Query: 241 T 241
T
Sbjct: 228 T 228
Score = 86 (35.3 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
++EL +T + + + F G+ SL+ L L N IT + + F G+ +++ L L N+I
Sbjct: 380 VQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRIT 439
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
+I F L L ++L N
Sbjct: 440 TITPGAFTTLVSLSTINLLSN 460
Score = 83 (34.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 169 ELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI 228
E+ L+ N I+SIP+ F L+ + ++ N+IS +AP N I E+
Sbjct: 108 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEL 167
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
+F + L+ + IN + + DL L+L
Sbjct: 168 AKGLFDGLVSLQLLLLNA---NKINCLRVNTFQDLQNLNL 204
Score = 79 (32.9 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 30/126 (23%), Positives = 49/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N+I S+ F L+ + + N+I I F L L L L N+I++LA
Sbjct: 109 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELA 168
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I + F+D+Q L L+ I+ +++ L +
Sbjct: 169 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQT 228
Query: 266 LDLGYN 271
L L N
Sbjct: 229 LHLAQN 234
Score = 76 (31.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 27/131 (20%), Positives = 58/131 (44%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQX 372
L L N ++ + T F L NL ++++S NK+ + +FD S+++L ++GN ++
Sbjct: 334 LRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAA-SVQELMLTGNQLET 392
Query: 373 XXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIK 432
+++ T + F ++ L+L N + I + + +
Sbjct: 393 VHGRMFRGLSSLKTLMLRSNL-ITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 451
Query: 433 LTHLDLSRNKF 443
L+ ++L N F
Sbjct: 452 LSTINLLSNPF 462
Score = 75 (31.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 27/125 (21%), Positives = 52/125 (41%)
Query: 146 LNLTHNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
L L N I S+L+ FK + NL+++ L NKI+ + F + ++ L L N++
Sbjct: 334 LRLNDNEI-SVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLET 392
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
+ R N I ++ + F + ++ + I P ++ L L
Sbjct: 393 VHGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSL 452
Query: 264 IYLDL 268
++L
Sbjct: 453 STINL 457
Score = 68 (29.0 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N V+ +FS+ L L L NRL + AF L +L L + N + + SF
Sbjct: 582 NSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDGLRSLRVLTLHGNDISSVPEGSFS 641
Query: 355 PIENSLRDLKISGN 368
+ SL L + N
Sbjct: 642 DL-TSLSHLALGTN 654
Score = 65 (27.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 24/104 (23%), Positives = 43/104 (41%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
+D S KL R + S P + DL+++ N I +++ +
Sbjct: 313 VDCSNQKLAR--IPSHLP--EYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKE 368
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ +G F +Q L L+GN L+ +H +++ L L L N
Sbjct: 369 VREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSN 412
Score = 64 (27.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK--------FKGFDEKSYI 452
G+FK P+L+ +NLS N ++++ + + L L+ N+ F+G +
Sbjct: 348 GIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTL 407
Query: 453 MSEPKNIHKAAKNSFALQSSM 473
M I + ++FA SS+
Sbjct: 408 MLRSNLITCVSNDTFAGLSSV 428
Score = 63 (27.2 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 22/112 (19%), Positives = 42/112 (37%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
IFK + L+ + ++ + + A + L L NQ
Sbjct: 349 IFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLM 408
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N + +F+ +++L L NR+ +T AFT L +L +++ N
Sbjct: 409 LRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 460
Score = 63 (27.2 bits), Expect = 8.9e-09, Sum P(3) = 8.9e-09
Identities = 23/92 (25%), Positives = 33/92 (35%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L L +DL N N I +F L+V
Sbjct: 565 PRELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDGLRSLRV 624
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V +F++LT+L L + N L
Sbjct: 625 LTLHGNDISSVPEGSFSDLTSLSHLALGTNPL 656
Score = 63 (27.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 28/120 (23%), Positives = 48/120 (40%)
Query: 300 ILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+LE + F L+ + L N++ +V AF ++ EL ++ N+L+ + F +
Sbjct: 343 VLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGL- 401
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
+SL+ L + N I + D T I G F L +NL N
Sbjct: 402 SSLKTLMLRSNLI-TCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 460
Score = 61 (26.5 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KLK +D+S N I +I P+ F+ ++ T L
Sbjct: 129 KLKRIDISKNQISDIAPDAFQGLKSLTSL 157
Score = 56 (24.8 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 396 TDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
T +P+ L + HL ++LS N++ + N + + L+ L LS N+ +
Sbjct: 562 TAVPRELSALR-HLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLR 609
Score = 56 (24.8 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + F L+ L L+ N + V+ F L+++ L + N++ + +F
Sbjct: 387 GNQLETVHGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 446
Query: 354 DPIENSLRDLKISGN 368
+ SL + + N
Sbjct: 447 TTLV-SLSTINLLSN 460
Score = 45 (20.9 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L L GN++ + + L+HL L N
Sbjct: 611 IPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTN 654
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 157 (60.3 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 49/158 (31%), Positives = 77/158 (48%)
Query: 49 HSSASVM-CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHL 107
HSS SV+ CP +C C+ + +V RG IP + TE+ ++ E+N +
Sbjct: 256 HSSCSVLQCPELCTCSNN------VVDCRGKGLTEIPTNLPETITEI-RL---EQNSIKI 305
Query: 108 TIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNL 167
F ++ L + ++N+ I + F G+ SL L L N IT L F G+ +L
Sbjct: 306 IPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSL 365
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
Q L L+ NKI + F L +L +LSL N++ +A
Sbjct: 366 QLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIA 403
Score = 148 (57.2 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 53/173 (30%), Positives = 80/173 (46%)
Query: 47 LLHSSASVMCPYMCEC---ALDDRGR-YEIVCR-------RGDM-ANPIP-IGQMDL-GT 92
LL + + CP C C A+D G+ V R R D+ AN + I + D G
Sbjct: 12 LLCGAGAQSCPSQCSCSGTAVDCHGQSLRSVPRNIPRNVERLDLNANNLTKITKADFAGL 71
Query: 93 EVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN 152
+ L+++ EN FQ Q LE L + + + + F G L L+L+ N
Sbjct: 72 KNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSENQ 131
Query: 153 ITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
I + F+G ++ L LD+N+I I F L DL VL+L +N IS+L+
Sbjct: 132 IQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRLS 184
Score = 131 (51.2 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 38/128 (29%), Positives = 58/128 (45%)
Query: 117 QHLEELHITNS---FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ EL + N+ + A G F +P LR +NL++N IT + + F+G + EL L
Sbjct: 516 QYTAELRLNNNEFTVLEATGI--FKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILT 573
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E + S+ L LR L L NRIS + N I ++P F
Sbjct: 574 SNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAF 633
Query: 234 KDIQELKT 241
+ L T
Sbjct: 634 DTLHSLST 641
Score = 119 (46.9 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 44/155 (28%), Positives = 71/155 (45%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A + CP C C G + C G IP + T L++ +E T G
Sbjct: 485 ADLACPEKCRC----EGT-TVDCS-GQKLTKIP-DHIPQYTAELRLNNNEFTVLEAT-G- 535
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF++ L +++++N+ I I F G + L LT N + + KG+ L+ L
Sbjct: 536 IFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLM 595
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L N+I + + F LS +R+LSL N I+ ++P
Sbjct: 596 LRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSP 630
Score = 112 (44.5 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 37/133 (27%), Positives = 54/133 (40%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P ++ L+L NN+T + +F G+ NL+ L L NKI SI F L +L L L
Sbjct: 46 IPRNVERLDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNR 105
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYS 258
N + L N I I + F+ E+K + + I +
Sbjct: 106 NNLQVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFR 165
Query: 259 ILADLIYLDLGYN 271
L DL L L N
Sbjct: 166 ALGDLEVLTLNNN 178
Score = 108 (43.1 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 31/147 (21%), Positives = 66/147 (44%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
+++E L + + + I F G+ +LR L L N I+S+ F+ + L+ L L+ N
Sbjct: 48 RNVERLDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNN 107
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ +P +F+ + L L L+ N+I + + YN I I F+ +
Sbjct: 108 LQVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRAL 167
Query: 237 QELKTFKCRSCGLENINPMMYSILADL 263
+L+ + + ++ ++ + L
Sbjct: 168 GDLEVLTLNNNNISRLSVASFNHMPKL 194
Score = 102 (41.0 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 294 GNHFPVI-LEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN F + LE S+ L ++ L N+++ ++ +F+N++ L+ L +SYN+L + +
Sbjct: 746 GNEFTQVPLE--LSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKA 803
Query: 353 FDPIENSLRDLKISGNNI 370
FD ++ SLR L + GN+I
Sbjct: 804 FDGLK-SLRLLSLHGNDI 820
Score = 86 (35.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 46/185 (24%), Positives = 73/185 (39%)
Query: 303 KSFSSQFKLQV--LCLKRNRLA----KVTTTAFTNLTNLI-ELDISYNKLDRLEVASFDP 355
+S SS LQ LC N + K T TNL I E+ + N + + +F P
Sbjct: 254 QSHSSCSVLQCPELCTCSNNVVDCRGKGLTEIPTNLPETITEIRLEQNSIKIIPAGAFAP 313
Query: 356 IENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLS 415
+ LR + +S N I + T++PKGLF LQ L L+
Sbjct: 314 YKR-LRRIDLSNNQITELASDSFQGLRSLNSLVLYGN-KITELPKGLFDGLFSLQLLLLN 371
Query: 416 GNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI-MSEPKNIHKAAKNSFALQSSMG 474
N + + +Q L L L NK + + ++ + + +H A+N F +
Sbjct: 372 ANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTLH-LAQNPFMCDCHLK 430
Query: 475 KNAEY 479
A+Y
Sbjct: 431 WLADY 435
Score = 80 (33.2 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 24/103 (23%), Positives = 42/103 (40%)
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
+DL NQ GN + + F F LQ+L L N++ +
Sbjct: 320 IDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKINCLR 379
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
+F +L NL L + NKL + +F + +++ L ++ N
Sbjct: 380 VDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLR-AIQTLHLAQN 421
Score = 78 (32.5 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 24/87 (27%), Positives = 43/87 (49%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + EL +T++ + + + G+ LR L L N I+ + + +F G+ +++ L L
Sbjct: 561 FEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSL 620
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHN 199
N I S+ F L L L+L N
Sbjct: 621 YDNLITSMSPGAFDTLHSLSTLNLLAN 647
Score = 74 (31.1 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 31/130 (23%), Positives = 54/130 (41%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I +F+ +L+ + L N++ ++ + +F L +L L + NK+ L FD
Sbjct: 301 NSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFD 360
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ SL+ L ++ N I + D I KG F +Q L+L
Sbjct: 361 GLF-SLQLLLLNANKINCLRVDSFQDLQNLNLLS-LYDNKLQTIAKGTFSSLRAIQTLHL 418
Query: 415 SGNNLQ-DIH 423
+ N D H
Sbjct: 419 AQNPFMCDCH 428
Score = 72 (30.4 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKG 445
G+FK P L+ +NLS N + DI ++ + L L+ N+ +G
Sbjct: 535 GIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEG 579
Score = 67 (28.6 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 23/92 (25%), Positives = 34/92 (36%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P+ S L +DL NQ N I K+F L++
Sbjct: 753 PLELSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLKSLRL 812
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N +A + AF +L++L L + N L
Sbjct: 813 LSLHGNDIAVIPDGAFKDLSSLSHLALGANPL 844
Score = 66 (28.3 bits), Expect = 2.5e-11, Sum P(4) = 2.5e-11
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+ L L+ NR++ V +FT L+++ L + N + + +FD + +SL L + N
Sbjct: 591 LRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTL-HSLSTLNLLAN 647
Score = 66 (28.3 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SFS+ +L L L NRL + AF L +L L + N + + +F
Sbjct: 770 NQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFK 829
Query: 355 PIENSLRDLKISGN 368
+ +SL L + N
Sbjct: 830 DL-SSLSHLALGAN 842
Score = 62 (26.9 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 21/101 (20%), Positives = 46/101 (45%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+ + ++ +F L LR ++L++N+I+ + N +
Sbjct: 520 ELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEG 579
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
++ + K + L+T RS + +N ++ L+ + L L
Sbjct: 580 VHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSL 620
Score = 60 (26.2 bits), Expect = 2.5e-11, Sum P(4) = 2.5e-11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
+T +P L HL ++LS N + + N + + +L L LS N+ + K++
Sbjct: 749 FTQVPLELSNYK-HLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAF 804
Score = 54 (24.1 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 23/88 (26%), Positives = 35/88 (39%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
LGT L + EN F+ ++ L + + I I F + L L L
Sbjct: 117 LGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLN 176
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKI 177
+NNI+ L +F M L+ L N +
Sbjct: 177 NNNISRLSVASFNHMPKLRTFRLHSNNL 204
Score = 52 (23.4 bits), Expect = 6.1e-10, Sum P(4) = 6.1e-10
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N + T F L L ++++S NK+ +E +F+ + + +L ++ N ++
Sbjct: 521 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGA-SGVNELILTSNRLE 578
Score = 50 (22.7 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 28/111 (25%), Positives = 42/111 (37%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXX 373
L L N +V +N +L +D+S N++ L SF + + L L +S N ++
Sbjct: 742 LYLDGNEFTQVPLE-LSNYKHLTLIDLSNNQISTLSNHSFSNM-SELLTLILSYNRLRCI 799
Query: 374 XXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQ-DIH 423
+ + IP G FK L L L N L D H
Sbjct: 800 PAKAFDGLKSLRLLSLHGN-DIAVIPDGAFKDLSSLSHLALGANPLYCDCH 849
Score = 49 (22.3 bits), Expect = 3.1e-10, Sum P(4) = 3.1e-10
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L+L GN++ I + ++ L+HL L N
Sbjct: 799 IPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLALGAN 842
Score = 46 (21.3 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+L+ +DLS N I E+ + F+ ++ L
Sbjct: 316 RLRRIDLSNNQITELASDSFQGLRSLNSL 344
Score = 46 (21.3 bits), Expect = 2.4e-09, Sum P(4) = 2.4e-09
Identities = 21/76 (27%), Positives = 32/76 (42%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N I E +F + L L NRL V + L L L + N++ + SF
Sbjct: 551 NKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFT 610
Query: 355 PIENSLRDLKISGNNI 370
+ +S+R L + N I
Sbjct: 611 GL-SSVRLLSLYDNLI 625
Score = 44 (20.5 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+++K+L L YN I I F+ + D +L
Sbjct: 144 TEIKNLQLDYNQISCIEDGAFRALGDLEVL 173
Score = 42 (19.8 bits), Expect = 6.0e-10, Sum P(3) = 6.0e-10
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 1 MEFTLIFMSKLKSLDL-SYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYM 59
++ L+ +K+ L + S+ D+ +N D + T+ L + + P+M
Sbjct: 365 LQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTLHLAQNPFM 424
Query: 60 CECAL 64
C+C L
Sbjct: 425 CDCHL 429
Score = 42 (19.8 bits), Expect = 5.9e-09, Sum P(4) = 5.9e-09
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N + SF+ +++L L N + ++ AF L +L L++ N
Sbjct: 599 NRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLAN 647
Score = 40 (19.1 bits), Expect = 6.3e-11, Sum P(4) = 6.3e-11
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+ L+ L L N I I F+D+Q+ L
Sbjct: 71 LKNLRVLQLMENKISSIERGAFQDLQELERL 101
Score = 39 (18.8 bits), Expect = 7.9e-11, Sum P(4) = 7.9e-11
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 5 LIFM--SKLKSLDLSYNDIVEINPEIFK 30
L+F+ +KL LDLS N I I + F+
Sbjct: 114 LLFLGTTKLFRLDLSENQIQGIPRKAFR 141
>FB|FBgn0085397 [details] [associations]
symbol:Fili "Fish-lips" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 GO:GO:0016021
GO:GO:0042981 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007476 GeneTree:ENSGT00700000104286 EMBL:BT015985
RefSeq:NP_001097402.1 UniGene:Dm.32432 SMR:Q5U1A7 STRING:Q5U1A7
EnsemblMetazoa:FBtr0112593 EnsemblMetazoa:FBtr0330338
GeneID:5740472 KEGG:dme:Dmel_CG34368 UCSC:CG34368-RC CTD:5740472
FlyBase:FBgn0085397 InParanoid:Q5U1A7 OMA:KEADDEP OrthoDB:EOG4H9W1T
GenomeRNAi:5740472 NextBio:20891510 Uniprot:Q5U1A7
Length = 738
Score = 202 (76.2 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 76/334 (22%), Positives = 142/334 (42%)
Query: 37 MLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLK 96
+L + + L +L + CP C+C L +C + + +PI Q++ T+ +
Sbjct: 23 VLLLLLLTLVILPPETTAFCPSKCQC-LGGEANSRALCVDAALED-VPI-QLNPETKYIN 79
Query: 97 IVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSL 156
+ + ++ P + + LE L ++ + I +G F LR LNL+ N ++SL
Sbjct: 80 LTVNRIRTLEFSL-PFYMK---LEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSL 135
Query: 157 LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXX 216
+ FKG+ NL L L FN+IE++ + L+ L L L +N I L
Sbjct: 136 HKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLE 195
Query: 217 XXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXX 276
N ++++ + LK+ +E + + L +L+ L + N
Sbjct: 196 VLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSEL 255
Query: 277 XXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLI 336
N+ ++ + S L L L NR +++ AF NL +L
Sbjct: 256 DLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLR 315
Query: 337 ELDIS-YNKLDRLEVASFDPIENS-LRDLKISGN 368
EL +S + L R++ +F ++N+ L+ L ++ N
Sbjct: 316 ELHLSRLDFLQRIDSRAF--VDNTHLQTLHLNNN 347
Score = 188 (71.2 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 76/322 (23%), Positives = 132/322 (40%)
Query: 122 LHITNSFIPAIGFH-PFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
+++T + I + F PF+ L L+L+ N I +L NF+ L+ L L N + S+
Sbjct: 78 INLTVNRIRTLEFSLPFY--MKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSL 135
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
F L++L +L L+ NRI + P N+IV + FK + L+
Sbjct: 136 HKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLE 195
Query: 241 TFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVI 300
R+ L ++ L L LD+ N GN +
Sbjct: 196 VLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSEL 255
Query: 301 LEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSL 360
+F L+ L L N L V T + L+NL L++ N+ +L +F + + L
Sbjct: 256 DLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFH-L 314
Query: 361 RDLKISGNN-IQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNL 419
R+L +S + +Q + +DIP LF+ NP++ + + N+L
Sbjct: 315 RELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSL 374
Query: 420 QDIHNLLYQSNIKLTHLDLSRN 441
Q +++ + + +L L L N
Sbjct: 375 QTLYSAQFPVD-QLQKLYLGDN 395
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 52/232 (22%), Positives = 100/232 (43%)
Query: 224 DIVE-INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
+I+E + + F+ EL+T + +++ + L +L+ LDL +N+
Sbjct: 106 NIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALS 165
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N+ + + F L+VL + NRL V + +L L LD+S
Sbjct: 166 DLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSL 225
Query: 343 NKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIP-KG 401
N ++ + SF+ ++ L L + GN + ++D N T +P +
Sbjct: 226 NLVEFVRNDSFEGLKELLA-LSVQGN-VMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQ 283
Query: 402 LFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF-KGFDEKSYI 452
L K++ +L +LNL GN + + + + L L LSR F + D ++++
Sbjct: 284 LSKLS-NLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFV 334
>FB|FBgn0034476 [details] [associations]
symbol:Toll-7 "Toll-7" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0004888
"transmembrane signaling receptor activity" evidence=ISS;NAS]
[GO:0006952 "defense response" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] [GO:0002752 "cell surface pattern recognition
receptor signaling pathway" evidence=IC] [GO:0008329 "pattern
recognition receptor activity" evidence=IC] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0046790 "virion binding"
evidence=IDA] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0010508 "positive regulation of autophagy"
evidence=IMP] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 EMBL:AE013599
GO:GO:0016021 GO:GO:0009897 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0010508 GO:GO:0051607
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0008329
GO:GO:0046790 GO:GO:0002752 GeneTree:ENSGT00700000104442
SUPFAM:SSF52200 FlyBase:FBgn0034476 EMBL:AF247765
RefSeq:NP_523797.1 UniGene:Dm.2660 SMR:Q7KIN0
EnsemblMetazoa:FBtr0086336 GeneID:37272 KEGG:dme:Dmel_CG8595
UCSC:CG8595-RA CTD:37272 InParanoid:Q7KIN0 OMA:NHAFIGR
GenomeRNAi:37272 NextBio:802851 Uniprot:Q7KIN0
Length = 1446
Score = 205 (77.2 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 88/396 (22%), Positives = 164/396 (41%)
Query: 86 GQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRY 145
G G+E+ + S ++ + + L+ L++ + + + G+ SLR
Sbjct: 241 GSGSAGSELQVLDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASLRI 300
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK-- 203
+NL++N++ +L + F G L+E++L N++ +P +F L L V+ L+ N+++
Sbjct: 301 VNLSNNHLETLPEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTSNH 360
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
+ +N + I+ FK++ L+ R+ + +I + L +L
Sbjct: 361 VDNTTFAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNL 420
Query: 264 IYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAK 323
L+L N+ N V+ F + L+ L L N+L +
Sbjct: 421 HTLNLAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNE 480
Query: 324 VTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXX 383
V A +L L LD+ N++ + SF + + L L++ N I
Sbjct: 481 VPR-ALQDLAMLRTLDLGENQIRTFDNQSFKNL-HQLTGLRLIDNQI-GNITVGMFQDLP 537
Query: 384 XXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443
+A I +G F N L+ + L N L DI N ++ + + L L+LS N
Sbjct: 538 RLSVLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLADI-NGVFATLVSLLWLNLSENHL 596
Query: 444 KGFDEKSYIMSEPK--NIH----KAAKNSFALQSSM 473
FD ++I S K +IH +A N + LQ +
Sbjct: 597 VWFDY-AFIPSNLKWLDIHGNYIEALGNYYKLQEEI 631
Score = 169 (64.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 69/265 (26%), Positives = 110/265 (41%)
Query: 83 IPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPA--IGFHPFWGV 140
+P G + G++ L+ + ++N + +F + + L + ++ + + + + F G+
Sbjct: 311 LPEG-LFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTFAGL 369
Query: 141 PSLRYLNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
L LNL HN +T + DY FK + LQ L L N I I + F+ L +L L+LA N
Sbjct: 370 IRLIVLNLAHNALTRI-DYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLAEN 428
Query: 200 RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSI 259
R+ L + N I + P +FK+ +LK S L + P
Sbjct: 429 RLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEV-PRALQD 487
Query: 260 LADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRN 319
LA L LDLG NQ N I F +L VL L +N
Sbjct: 488 LAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKN 547
Query: 320 RLAKVTTTAFTNLTNL--IELDISY 342
R+ + +F L I LD ++
Sbjct: 548 RIQSIERGSFDKNFELEAIRLDRNF 572
Score = 127 (49.8 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 56/241 (23%), Positives = 101/241 (41%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNL-THNNI---TSLLDY---NFKGM 164
+F + Q LE L + + + + + F G+ +L+ L L THN+ T L+ + G+
Sbjct: 129 VFARLQTLEALRLDSCKLLQLPNNAFEGLATLKSLRLSTHNSEWGPTRTLELFPDSLGGL 188
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND 224
L +L L N + +PS + +L+VL+L NRI + A +
Sbjct: 189 KQLTDLDLGDNNLRQLPSGFLCPVGNLQVLNLTRNRI-RTAEQMGFADMNCGAGSGSAGS 247
Query: 225 IVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXX 284
+++ + EL++ S G+ S L L +L+L YN
Sbjct: 248 ELQV---LDASHNELRSIS-ESWGI--------SRLRRLQHLNLAYNNLSELSGEALAGL 295
Query: 285 XXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
NH + E F+ +L+ + L++N L ++ F L L+ +D+S N+
Sbjct: 296 ASLRIVNLSNNHLETLPEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQ 355
Query: 345 L 345
L
Sbjct: 356 L 356
Score = 126 (49.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 40/152 (26%), Positives = 71/152 (46%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENP---NHLTIGPI 112
CP C C D +V G +P ++ + + V+ + P NH IG
Sbjct: 796 CPSNCTCYHDQIWSTNVVDCGGQQTTELP-RRVPMDSSVVYL-DGNNFPVLKNHAFIGR- 852
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
++L L++ S + AI F + SL+ L+L N + +L Y F+ + L+ELYL
Sbjct: 853 ----KNLRALYVNGSQVAAIQNRTFASLASLQLLHLADNKLRTLHGYEFEQLSALRELYL 908
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
N++ +I ++ L+ L ++ + NR+ L
Sbjct: 909 QNNQLTTIENATLAPLAALELIRIDGNRLVTL 940
Score = 94 (38.1 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN+FPV+ +F + L+ L + +++A + F +L +L L ++ NKL L F
Sbjct: 838 GNNFPVLKNHAFIGRKNLRALYVNGSQVAAIQNRTFASLASLQLLHLADNKLRTLHGYEF 897
Query: 354 DPIENSLRDLKISGNNI 370
+ + ++LR+L + N +
Sbjct: 898 EQL-SALRELYLQNNQL 913
Score = 86 (35.3 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
G+ I ++F+S LQ+L L N+L + F L+ L EL + N+L +E A+
Sbjct: 862 GSQVAAIQNRTFASLASLQLLHLADNKLRTLHGYEFEQLSALRELYLQNNQLTTIENATL 921
Query: 354 DPIENSLRDLKISGNNI 370
P+ +L ++I GN +
Sbjct: 922 APLA-ALELIRIDGNRL 937
Score = 84 (34.6 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 30/99 (30%), Positives = 54/99 (54%)
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
G + F+ LE + + +F+ I F + SL +LNL+ N++ DY F NL+
Sbjct: 555 GSFDKNFE-LEAIRLDRNFLADIN-GVFATLVSLLWLNLSENHLV-WFDYAFIPS-NLKW 610
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSL--AHNRISKLAP 206
L + N IE++ + + ++RV +L +HNRI+++ P
Sbjct: 611 LDIHGNYIEAL-GNYYKLQEEIRVKTLDASHNRITEIGP 648
Score = 48 (22.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 10 KLKSLDLSYNDIVEINP 26
++K+LD S+N I EI P
Sbjct: 632 RVKTLDASHNRITEIGP 648
Score = 47 (21.6 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDI 32
S LK LDLS N + E+ P +D+
Sbjct: 466 SDLKELDLSSNQLNEV-PRALQDL 488
Score = 43 (20.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 394 NYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
N+ + F +L+ L ++G+ + I N + S L L L+ NK +
Sbjct: 840 NFPVLKNHAFIGRKNLRALYVNGSQVAAIQNRTFASLASLQLLHLADNKLR 890
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 200 (75.5 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 89/399 (22%), Positives = 149/399 (37%)
Query: 54 VMCPYMCECALDD-RGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI-GP 111
+ CP +C C DD + C ++ +P G + GT L + + N +I
Sbjct: 43 LQCPAVCSCGHDDFTDELSVFCSSRNLTQ-LP-GGLPPGTRALWL----DGNNFSSIPAA 96
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
F+ L L++ S + ++ G+ L +L+L HN + +L + F L L
Sbjct: 97 AFRNLSGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNRLHALAAHTFLHTPGLASLG 156
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L N + + +F L+ L L+L N ++ L N + + P
Sbjct: 157 LSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPP 216
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+F + EL+ L ++ ++ L L L L +N
Sbjct: 217 LFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLD 276
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N +LE SF L VL L N LA + F +L L EL + +N+L +L
Sbjct: 277 LSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEE 336
Query: 352 SFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQF 411
+F + L L ++ N +Q ++ D+P+ F+ L
Sbjct: 337 AFAGL-GQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNC-LRDLPERAFQGLAKLHS 394
Query: 412 LNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKS 450
L+L G L + L + L L L N DE+S
Sbjct: 395 LHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERS 433
Score = 200 (75.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 61/259 (23%), Positives = 109/259 (42%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F + L L ++++ + ++ F G+ L L L+HN + L FK + L+EL L
Sbjct: 266 FLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQL 325
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N++ +P F L L VL+L N++ +L P N + ++
Sbjct: 326 GHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERA 385
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
F+ + +L + L + P+ ++ L+ L L L N
Sbjct: 386 FQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDL 445
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N + + F +L+ L L RNRL+ + A L LD+S+N+L+ L A+
Sbjct: 446 TANQLTHLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAA 505
Query: 353 FDPIENSLRDLKISGNNIQ 371
P+ LR L + N+++
Sbjct: 506 LAPLSR-LRFLSLRNNSLR 523
Score = 199 (75.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 62/260 (23%), Positives = 109/260 (41%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F + L++L++ ++ + A+ F G+ +LR+L+L+HN + SLL+ +F G++ L L
Sbjct: 241 VFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLR 300
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L N + + F L L L L HNR+ +L N + E+ P
Sbjct: 301 LSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPG 360
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F ++ L S L ++ + LA L L L
Sbjct: 361 GFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLF 420
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
GN + E+S +L L L N+L + F +L L L ++ N+L L
Sbjct: 421 LKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARNRLSALPAD 480
Query: 352 SFDPIENSLRDLKISGNNIQ 371
+ P++ + L +S N ++
Sbjct: 481 ALGPLQRTFW-LDVSHNRLE 499
Score = 180 (68.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 83/357 (23%), Positives = 142/357 (39%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
LG L + E N H F L L ++N+ + + F G+ L LNL
Sbjct: 123 LGLRGLCHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLG 182
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
N++T L D F+G+ L+EL L NK+ + +F L +LR L L+ N + +
Sbjct: 183 WNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVF 242
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLG 269
+N + + P F ++ L+ + ++ + L L L L
Sbjct: 243 VKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLS 302
Query: 270 YNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAF 329
+N N + E++F+ +L+VL L N+L ++ F
Sbjct: 303 HNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGF 362
Query: 330 TNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQX----XXXXXXXXXXXXX 385
L NL L++S N L L +F + L L + G +
Sbjct: 363 LGLRNLAVLNLSSNCLRDLPERAFQGLAK-LHSLHLEGGCLARLGPLAFAGLSGLRRLFL 421
Query: 386 XXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
IAD++ + GL ++ L+ L+L+ N L + L+Q +L +L L+RN+
Sbjct: 422 KGNSIADVDERSLG-GLAEL---LE-LDLTANQLTHLPGRLFQDLGRLEYLLLARNR 473
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 70/311 (22%), Positives = 112/311 (36%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNR 200
P R L L NN +S+ F+ + L L L + + S+ + L L L L HNR
Sbjct: 78 PGTRALWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNR 137
Query: 201 ISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSIL 260
+ LA N + ++ +F+ + L L + + L
Sbjct: 138 LHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGL 197
Query: 261 ADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNR 320
A L L L N+ N + F KLQ L L N
Sbjct: 198 AGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNL 257
Query: 321 LAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXX 380
+A V AF + L LD+S+N++ L SF P L L++S +N+
Sbjct: 258 VAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSF-PGLLGLHVLRLS-HNVLAGLRPRTFK 315
Query: 381 XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSR 440
+ +P+ F L+ L L+ N LQ++ + L L+LS
Sbjct: 316 DLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSS 375
Query: 441 NKFKGFDEKSY 451
N + E+++
Sbjct: 376 NCLRDLPERAF 386
Score = 130 (50.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 53/194 (27%), Positives = 80/194 (41%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRY 70
L L LS+N + + P FKD+ L L L A + AL+D
Sbjct: 296 LHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQ 355
Query: 71 EIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIP 130
E+ R G + ++L + L+ +P FQ L LH+ +
Sbjct: 356 EL--RPGGFLGLRNLAVLNLSSNCLRDLPERA----------FQGLAKLHSLHLEGGCLA 403
Query: 131 AIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSD 190
+G F G+ LR L L N+I + + + G+ L EL L N++ +P +F L
Sbjct: 404 RLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGR 463
Query: 191 LRVLSLAHNRISKL 204
L L LA NR+S L
Sbjct: 464 LEYLLLARNRLSAL 477
Score = 130 (50.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 59/268 (22%), Positives = 99/268 (36%)
Query: 105 NHLTIGPIFQQ-FQHLEELHITN-SFIPAIGFHP--FWGVPSLRYLNLTHNNITSLLDYN 160
+H +G + + F L LH+ S G P F + L L L HN + L +
Sbjct: 278 SHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEA 337
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
F G+ L+ L L+ N+++ + F+ L +L VL+L+ N + L R
Sbjct: 338 FAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHL 397
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXX 280
+ + P F + L+ + + +++ LA+L+ LDL NQ
Sbjct: 398 EGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRL 457
Query: 281 XXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340
N + + + L + NRL + A L+ L L +
Sbjct: 458 FQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAALAPLSRLRFLSL 517
Query: 341 SYNKLDRLEVASFDPIENSLRDLKISGN 368
N L +F P L L + GN
Sbjct: 518 RNNSL-----RTFAPQPPGLERLWLEGN 540
Score = 41 (19.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLF 39
+ +L+ LDLS N + + +F + L+
Sbjct: 221 LGELRELDLSRNTLRSVKANVFVKLPKLQKLY 252
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 142 (55.0 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 47/172 (27%), Positives = 75/172 (43%)
Query: 47 LLHSSASVMCPYMCECA---LDDRGRYEIVCRRG----------DMANPIPIGQMDL-GT 92
+L + CP C C+ +D G RG D N I +MD G
Sbjct: 25 ILSGPPAAACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFAGL 84
Query: 93 EVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN 152
+ L+++ E+N + FQ + LE L + + + + F P L L+L+ N
Sbjct: 85 KNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQ 144
Query: 153 ITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
I + F+G+ ++ L LD N I I F L DL +L+L +N IS++
Sbjct: 145 IQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRI 196
Score = 137 (53.3 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 45/153 (29%), Positives = 75/153 (49%)
Query: 53 SVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPI 112
S+ CP C C+ + IV RG IP +L +++I + + + G
Sbjct: 277 SLSCPSACSCSNN------IVDCRGKGLTEIPA---NLPEGIVEIRLEQNSIKSIPAGA- 326
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F Q++ L+ + I+ + I I F G+ SL L L N IT + F G+++LQ L L
Sbjct: 327 FTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLL 386
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ NKI + + F L +L +LSL N++ ++
Sbjct: 387 NANKINCLRVNTFQDLQNLNLLSLYDNKLQTIS 419
Score = 135 (52.6 bits), Expect = 8.5e-13, Sum P(3) = 8.5e-13
Identities = 41/153 (26%), Positives = 78/153 (50%)
Query: 54 VMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIF 113
++CP C C G + C +A IP + T+ L++ ++ + + L IF
Sbjct: 503 LVCPEKCRC----EGTI-VDCSNQKLAR-IPSHLPEYTTD-LRL--NDNDISVLEATGIF 553
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
++ +L +++++N+ I + F G ++ L LT N + ++ F+G+ +L+ L L
Sbjct: 554 KKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLR 613
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N I + + F LS +R+LSL NRI+ + P
Sbjct: 614 SNLISCVSNDTFAGLSSVRLLSLYDNRITTITP 646
Score = 123 (48.4 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 42/143 (29%), Positives = 63/143 (44%)
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P+HL P + L + I S + A G F +P+LR +NL++N I + + F G
Sbjct: 527 PSHL---PEYTTDLRLNDNDI--SVLEATGI--FKKLPNLRKINLSNNRIKEVREGAFDG 579
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
+QEL L N++E++ +F LS L+ L L N IS ++ N
Sbjct: 580 AAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDN 639
Query: 224 DIVEINPEIFKDIQELKTFKCRS 246
I I P F + L T S
Sbjct: 640 RITTITPGAFTTLVSLSTINLLS 662
Score = 114 (45.2 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 35/134 (26%), Positives = 56/134 (41%)
Query: 139 GVP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
G+P + L+L NNIT + +F G+ NL+ L+L+ N++ I F L L L L
Sbjct: 58 GIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLN 117
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
N++ L N I I + F+ + +K + + + I +
Sbjct: 118 KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAF 177
Query: 258 SILADLIYLDLGYN 271
L DL L L N
Sbjct: 178 RALRDLEILTLNNN 191
Score = 111 (44.1 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L + P +FQ L L ++ + I I F GV ++ L L +N+I+ + D
Sbjct: 117 NKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGA 176
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + +L+ L L+ N I I + F H+ +R L L N +
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 107 (42.7 bits), Expect = 8.5e-13, Sum P(3) = 8.5e-13
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + K S+ +L ++ L N ++ +T F+N+++L L +SYN+L + V +F
Sbjct: 761 GNHLTAV-PKELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAF 819
Query: 354 DPIENSLRDLKISGNNI 370
+ + SLR L + GN+I
Sbjct: 820 NGLR-SLRVLTLHGNDI 835
Score = 101 (40.6 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
E+ + + I +I F L+ ++++ N I+ + F+G+ +L L L NKI I
Sbjct: 311 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
P +F L L++L L N+I+ L N + I+ +F +Q ++
Sbjct: 371 PKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQ 430
Query: 241 T 241
T
Sbjct: 431 T 431
Score = 96 (38.9 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 30/136 (22%), Positives = 59/136 (43%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ E L + + I I F G+ +LR L+L N ++ + F+ + L+ L L+ NK
Sbjct: 61 RNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNK 120
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ +P +F L L L+ N+I + + N I I F+ +
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 237 QELKTFKCRSCGLENI 252
++L+ + + I
Sbjct: 181 RDLEILTLNNNNISRI 196
Score = 86 (35.3 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 32/146 (21%), Positives = 58/146 (39%)
Query: 335 LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMN 394
++E+ + N + + +F + L+ + IS N I +
Sbjct: 309 IVEIRLEQNSIKSIPAGAFTQYKK-LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGN-K 366
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI-M 453
T+IPKGLF LQ L L+ N + + +Q L L L NK + + ++ +
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPL 426
Query: 454 SEPKNIHKAAKNSFALQSSMGKNAEY 479
+ +H A+N F + A+Y
Sbjct: 427 QSIQTLH-LAQNPFVCDCHLKWLADY 451
Score = 85 (35.0 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 26/100 (26%), Positives = 43/100 (43%)
Query: 169 ELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI 228
E+ L+ N I+SIP+ F L+ + ++ N+IS +AP N I EI
Sbjct: 311 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
+F + L+ + IN + + DL L+L
Sbjct: 371 PKGLFDGLVSLQLLLLNA---NKINCLRVNTFQDLQNLNL 407
Score = 80 (33.2 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 25/103 (24%), Positives = 41/103 (39%)
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
+D+ NQ GN I + F LQ+L L N++ +
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLR 395
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
F +L NL L + NKL + F P++ S++ L ++ N
Sbjct: 396 VNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQ-SIQTLHLAQN 437
Score = 80 (33.2 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
++EL +T + + + F G+ SL+ L L N I+ + + F G+ +++ L L N+I
Sbjct: 583 VQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRIT 642
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
+I F L L ++L N
Sbjct: 643 TITPGAFTTLVSLSTINLLSN 663
Score = 78 (32.5 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
Identities = 28/114 (24%), Positives = 50/114 (43%)
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
+F+ KL+ + + +N+++ + AF L +L L + NK+ + FD + SL+ L
Sbjct: 326 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLV-SLQLL 384
Query: 364 KISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
++ N I + D I KGLF +Q L+L+ N
Sbjct: 385 LLNANKINCLRVNTFQDLQNLNLLS-LYDNKLQTISKGLFVPLQSIQTLHLAQN 437
Score = 76 (31.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 31/128 (24%), Positives = 52/128 (40%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N + + AFT L +DIS N++ + +F ++ SL L + GN I
Sbjct: 314 LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLK-SLTSLVLYGNKITEIPK 372
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + F+ +L L+L N LQ I L+ +
Sbjct: 373 GLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQT 431
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 432 LHLAQNPF 439
Score = 71 (30.1 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 23/105 (21%), Positives = 50/105 (47%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
+L L+ N I + ++ +F L +LR ++L++NRI ++ N +
Sbjct: 536 DLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLET 595
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F+ + LKT RS + ++ ++ L+ + L L N+
Sbjct: 596 MHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNR 640
Score = 71 (30.1 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 26/125 (20%), Positives = 53/125 (42%)
Query: 146 LNLTHNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
L L N+I S+L+ FK + NL+++ L N+I+ + F + ++ L L N++
Sbjct: 537 LRLNDNDI-SVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLET 595
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
+ R N I ++ + F + ++ + I P ++ L L
Sbjct: 596 MHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSL 655
Query: 264 IYLDL 268
++L
Sbjct: 656 STINL 660
Score = 71 (30.1 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 28/126 (22%), Positives = 47/126 (37%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N+I S+ F L+ + + N+I I F L L L L N+I+++
Sbjct: 312 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 371
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I + F+D+Q L L+ I+ ++ L +
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQT 431
Query: 266 LDLGYN 271
L L N
Sbjct: 432 LHLAQN 437
Score = 70 (29.7 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N ++ +FS+ L L L NRL + AF L +L L + N + + SF+
Sbjct: 785 NSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 844
Query: 355 PIENSLRDLKISGN 368
+ SL L + N
Sbjct: 845 DL-TSLSHLALGTN 857
Score = 66 (28.3 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 29/120 (24%), Positives = 47/120 (39%)
Query: 300 ILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+LE + F L+ + L NR+ +V AF + EL ++ N+L+ + F +
Sbjct: 546 VLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGL- 604
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
+SL+ L + N I + D T I G F L +NL N
Sbjct: 605 SSLKTLMLRSNLISCVSNDTFAGLSSVRLLS-LYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 65 (27.9 bits), Expect = 9.4e-08, Sum P(4) = 9.4e-08
Identities = 25/122 (20%), Positives = 46/122 (37%)
Query: 223 NDIVEINPE-IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
NDI + IFK + L+ + ++ + + A + L L NQ
Sbjct: 542 NDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMF 601
Query: 282 XXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
N + +F+ +++L L NR+ +T AFT L +L +++
Sbjct: 602 RGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLL 661
Query: 342 YN 343
N
Sbjct: 662 SN 663
Score = 63 (27.2 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK--------FKGFDEKSYI 452
G+FK P+L+ +NLS N ++++ + + L L+ N+ F+G +
Sbjct: 551 GIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTL 610
Query: 453 MSEPKNIHKAAKNSFALQSSM 473
M I + ++FA SS+
Sbjct: 611 MLRSNLISCVSNDTFAGLSSV 631
Score = 63 (27.2 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 24/131 (18%), Positives = 57/131 (43%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQX 372
L L N ++ + T F L NL ++++S N++ + +FD +++L ++GN ++
Sbjct: 537 LRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAG-VQELMLTGNQLET 595
Query: 373 XXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIK 432
+++ + + F ++ L+L N + I + + +
Sbjct: 596 MHGRMFRGLSSLKTLMLRSNL-ISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 654
Query: 433 LTHLDLSRNKF 443
L+ ++L N F
Sbjct: 655 LSTINLLSNPF 665
Score = 62 (26.9 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 22/92 (23%), Positives = 32/92 (34%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N N I +F+ L+V
Sbjct: 768 PKELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRV 827
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V +F +LT+L L + N L
Sbjct: 828 LTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 61 (26.5 bits), Expect = 8.5e-13, Sum P(3) = 8.5e-13
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KLK +D+S N I +I P+ F+ ++ T L
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 61 (26.5 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 24/104 (23%), Positives = 44/104 (42%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
+D S KL R + S P + DL+++ N+I +++ +
Sbjct: 516 VDCSNQKLAR--IPSHLPEYTT--DLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKE 571
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ +G F +Q L L+GN L+ +H +++ L L L N
Sbjct: 572 VREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSN 615
Score = 55 (24.4 bits), Expect = 8.8e-07, Sum P(4) = 8.8e-07
Identities = 16/75 (21%), Positives = 34/75 (45%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + F L+ L L+ N ++ V+ F L+++ L + N++ + +F
Sbjct: 590 GNQLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 649
Query: 354 DPIENSLRDLKISGN 368
+ SL + + N
Sbjct: 650 TTLV-SLSTINLLSN 663
Score = 47 (21.6 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L L GN++ + + L+HL L N
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
Score = 46 (21.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 24/121 (19%), Positives = 40/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I F ++LK + +I P + L L L L N+
Sbjct: 317 NSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFD 376
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L ++ F L ++ L ++
Sbjct: 377 GLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQ 436
Query: 343 N 343
N
Sbjct: 437 N 437
Score = 44 (20.5 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 5 LIFMS--KLKSLDLSYNDIVEINPEIFKDI 32
L+F S KL LDLS N I I + F+ +
Sbjct: 127 LLFQSTPKLTRLDLSENQIQGIPRKAFRGV 156
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 204 (76.9 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 77/337 (22%), Positives = 139/337 (41%)
Query: 105 NHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGM 164
N L + P F L+ L + N+ I +I +P LR L+L+ N + ++ +F
Sbjct: 325 NLLEVIPKFIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKS 384
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND 224
NL L L FN+I ++ F L++L L L++NR+S L R +N
Sbjct: 385 NNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQ 444
Query: 225 IVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXX 284
+ EIN F+ ++ +K + +S + + ++ ++ + +DL NQ
Sbjct: 445 L-EINWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNL 503
Query: 285 XXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
N I ++ L+VL L N + + L L L++++N+
Sbjct: 504 TKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNR 563
Query: 345 LDRLEVASFDPIENSLRDLKISGNN----IQXXXXXXXXXXXXXXXXXXIADMNYTDIP- 399
L L+ +FD ++N L +L + N I+ + N I
Sbjct: 564 LQYLQENTFDCVKN-LEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQIST 622
Query: 400 KGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHL 436
K + +N +L+ LNL N L I ++ ++L L
Sbjct: 623 KAMSGLN-NLEILNLGSNALASIQVNAFEHMLRLNKL 658
Score = 140 (54.3 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 61/280 (21%), Positives = 108/280 (38%)
Query: 94 VLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNI 153
+L+ + N H F + +L L ++ + I + H F + +L L L++N +
Sbjct: 362 LLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRL 421
Query: 154 TSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXX 213
++L FK + L++L L+FN++E I S F L ++ L L N+I L
Sbjct: 422 STLPIRVFKNLNQLKKLALNFNQLE-INWSTFRGLESMKNLQLKSNKIRALQDGVFYVMH 480
Query: 214 XXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQX 273
N I ++ + ++ +L+ + I + L LDL N
Sbjct: 481 KIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAI 540
Query: 274 XXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV-----TTTA 328
N + E +F L+ L L+RNRL+ +
Sbjct: 541 NEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAP 600
Query: 329 FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
F L L LD+ N L ++ + + N+L L + N
Sbjct: 601 FKGLRKLRRLDLHGNNLKQISTKAMSGL-NNLEILNLGSN 639
Score = 126 (49.4 bits), Expect = 0.00029, P = 0.00029
Identities = 68/313 (21%), Positives = 118/313 (37%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G+ L++L L +N+ITS+ + + L+ L L NK+ +I + F ++L L L
Sbjct: 333 FIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLIL 392
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
+ N I+ + N + + +FK++ +LK LE IN
Sbjct: 393 SFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLE-INWST 451
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L + L L N+ N + + + KL+ L L
Sbjct: 452 FRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNL 511
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXX 376
N ++++ + +L LD+S N ++ + D + L+ L ++ N +Q
Sbjct: 512 SFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHR-LKTLNLAHNRLQYLQEN 570
Query: 377 XXX--------XXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQ 428
I D + KGL K L+ L+L GNNL+ I
Sbjct: 571 TFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRK----LRRLDLHGNNLKQISTKAMS 626
Query: 429 SNIKLTHLDLSRN 441
L L+L N
Sbjct: 627 GLNNLEILNLGSN 639
Score = 122 (48.0 bits), Expect = 0.00079, P = 0.00079
Identities = 67/327 (20%), Positives = 123/327 (37%)
Query: 140 VPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+PS ++ L+L +N + + ++NL ++ L N +E IP F+ LS L+ L LA+
Sbjct: 289 LPSYVQTLHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPK--FIGLSGLKHLVLAN 346
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYS 258
N I+ ++ N + I F L + N+N ++
Sbjct: 347 NHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFA 406
Query: 259 ILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKR 318
L +L L+L N+ N + +F ++ L LK
Sbjct: 407 TLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWS-TFRGLESMKNLQLKS 465
Query: 319 NRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXX 378
N++ + F + + +D++ N++ L + LR L +S N I
Sbjct: 466 NKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNL-TKLRHLNLSFNAISRIEVDTW 524
Query: 379 XXXXXXXXXXXIADMNYTDI----PKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLT 434
+ D++ I P+ L ++ L+ LNL+ N LQ + + L
Sbjct: 525 EFTQSLE----VLDLSNNAINEFKPQHLDCLH-RLKTLNLAHNRLQYLQENTFDCVKNLE 579
Query: 435 HLDLSRNKFKGFDEKSYIMSEPKNIHK 461
L+L RN+ E + K + K
Sbjct: 580 ELNLRRNRLSWIIEDQSAAAPFKGLRK 606
>FB|FBgn0013272 [details] [associations]
symbol:Gp150 "Gp150" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007185
"transmembrane receptor protein tyrosine phosphatase signaling
pathway" evidence=IDA] [GO:0048749 "compound eye development"
evidence=IMP] [GO:0002121 "inter-male aggressive behavior"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005886 InterPro:IPR003591 SMART:SM00369 GO:GO:0002121
ChiTaRS:ANPEP GO:GO:0048749 GO:GO:0007185 FlyBase:FBgn0013272
EMBL:BT015195 ProteinModelPortal:Q6AWQ3 STRING:Q6AWQ3 PRIDE:Q6AWQ3
InParanoid:Q6AWQ3 ArrayExpress:Q6AWQ3 Bgee:Q6AWQ3 Uniprot:Q6AWQ3
Length = 1076
Score = 203 (76.5 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 92/408 (22%), Positives = 154/408 (37%)
Query: 51 SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNH-LTI 109
S V CP C+CA + C R DM G G+++ +V + P + + +
Sbjct: 253 SEDVPCPRFCQCARNVNSYLVATCSRLDM------GIQKFGSDITDLVVTNVGPKYPILM 306
Query: 110 GPIFQQ---FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
GP F Q +++ + I N + + F G+ L +NLT + + F G
Sbjct: 307 GPNFFQNLGLKNVASIKIANCTLEYLHAEAFHGLNELYAVNLTDVGLAIINPDTFVGNKK 366
Query: 167 LQELYLDFNKIESIPSSVFMHL--SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND 224
L+ L + N + S+ SS+ L S + L + N + +L P+ N
Sbjct: 367 LRMLTISGNDL-SVMSSIHYLLKSSSIEELDFSRNNLMELNPKAFSHLSNVVYINLSQNS 425
Query: 225 IVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXX 284
+ ++ + F+ + L+ L + +++ L L L YN
Sbjct: 426 LKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNGTT-LSILHLKYNTFNGDLHFGTKDL 484
Query: 285 XXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
N + F L L LK N + K+ +F L NL +D+S N
Sbjct: 485 QQLDLSF---NSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDSFLTLKNLRHIDLSIND 541
Query: 345 LDRLEVASFDPIENSLRD-LKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDI-PKG- 401
LD++ F +NS D ++++ N D++ I P G
Sbjct: 542 LDQISGMLF--FKNSELDVIRLNDNPRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGH 599
Query: 402 -LFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
F PHL L L+ NN+ + ++ KL LDLS N D+
Sbjct: 600 KAFSTMPHLTTLKLAWNNINHLPREIFTELHKLIDLDLSNNLITRMDD 647
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 75/336 (22%), Positives = 130/336 (38%)
Query: 114 QQFQHLEELH---ITNSFIPAIGFHPFWGVPSLRYLNLTHNNIT--SLLDYNFKGMMNLQ 168
+ F L EL+ +T+ + I F G LR L ++ N+++ S + Y K +++
Sbjct: 335 EAFHGLNELYAVNLTDVGLAIINPDTFVGNKKLRMLTISGNDLSVMSSIHYLLKSS-SIE 393
Query: 169 ELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI 228
EL N + + F HLS++ ++L+ N + KL + YN + E+
Sbjct: 394 ELDFSRNNLMELNPKAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTEL 453
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXX 288
+IF T N ++ DL LDL +N
Sbjct: 454 PRDIFNGT----TLSILHLKYNTFNGDLHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLT 509
Query: 289 XXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN-KLDR 347
GN I SF + L+ + L N L +++ F + L + ++ N +L +
Sbjct: 510 NLNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDNPRLSQ 569
Query: 348 LEVASFDPI--ENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKM 405
L F E ++ L IS I +A N +P+ +F
Sbjct: 570 LPTDGFLSYSGEFTVYYLDISNCAI-GPLGHKAFSTMPHLTTLKLAWNNINHLPREIFTE 628
Query: 406 NPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
L L+LS N + + +L++ N +LT L L+ N
Sbjct: 629 LHKLIDLDLSNNLITRMDDLIFMDNGELTKLSLAGN 664
Score = 134 (52.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 79/354 (22%), Positives = 138/354 (38%)
Query: 105 NHLTIGPIFQQFQHLEE---LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF 161
N + + P + F HL ++++ + + + F V L L+L++N++T L F
Sbjct: 401 NLMELNP--KAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIF 458
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
G L L+L +N + DL+ L L+ N I ++
Sbjct: 459 NGT-TLSILHLKYNTFNG---DLHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLK 514
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN----QXXXXX 277
N I +I P+ F ++ L+ L+ I+ M++ ++L + L N Q
Sbjct: 515 GNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDNPRLSQLPTDG 574
Query: 278 XXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIE 337
+ K+FS+ L L L N + + FT L LI+
Sbjct: 575 FLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKLAWNNINHLPREIFTELHKLID 634
Query: 338 LDISYNKLDRLEVASFDPIENS-LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT 396
LD+S N + R++ F ++N L L ++GN I + D T
Sbjct: 635 LDLSNNLITRMDDLIF--MDNGELTKLSLAGNPISRLSVRLFLPLHQLRCLD-VNDCELT 691
Query: 397 ------DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
D+ G +K+ L+ N SGN ++ I + +S L LD++ N K
Sbjct: 692 TLLSDRDLGAG-YKIFDSLRSFNASGNLIKKITSEDVKSFKNLRSLDITNNPLK 744
Score = 122 (48.0 bits), Expect = 0.00066, P = 0.00066
Identities = 46/228 (20%), Positives = 94/228 (41%)
Query: 228 INPEIFKDI--QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ P F+++ + + + K +C LE ++ + L +L ++L
Sbjct: 306 MGPNFFQNLGLKNVASIKIANCTLEYLHAEAFHGLNELYAVNLTDVGLAIINPDTFVGNK 365
Query: 286 XXXXXXXXGNHFPVILEKSFS-SQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
GN V+ + ++ L RN L ++ AF++L+N++ +++S N
Sbjct: 366 KLRMLTISGNDLSVMSSIHYLLKSSSIEELDFSRNNLMELNPKAFSHLSNVVYINLSQNS 425
Query: 345 LDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK 404
L +L +F+ + L +L +S N++ I + Y L
Sbjct: 426 LKKLPEKAFEKV-TLLEELDLSYNSL-----TELPRDIFNGTTLSILHLKYNTFNGDLHF 479
Query: 405 MNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI 452
LQ L+LS N++ +H+ ++ LT+L+L N K S++
Sbjct: 480 GTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDSFL 527
Score = 111 (44.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 62/302 (20%), Positives = 117/302 (38%)
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
S+ L+ + NN+ L F + N+ + L N ++ +P F ++ L L L++N +
Sbjct: 391 SIEELDFSRNNLMELNPKAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSL 450
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
++L PR YN N ++ ++L+ + ++ M+ +
Sbjct: 451 TEL-PRDIFNGTTLSILHLKYNTF---NGDLHFGTKDLQQLDLSFNSIVQVHHSMFDKMP 506
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRN-R 320
L L+L N N I F +L V+ L N R
Sbjct: 507 GLTNLNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDNPR 566
Query: 321 LAKVTTTAFTNLTN---LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXX 377
L+++ T F + + + LDIS + L +F + + L LK++ NNI
Sbjct: 567 LSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPH-LTTLKLAWNNINHLPREI 625
Query: 378 XXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLD 437
+++ T + +F N L L+L+GN + + L+ +L LD
Sbjct: 626 FTELHKLIDLD-LSNNLITRMDDLIFMDNGELTKLSLAGNPISRLSVRLFLPLHQLRCLD 684
Query: 438 LS 439
++
Sbjct: 685 VN 686
Score = 60 (26.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 5 LIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ S ++ LD S N+++E+NP+ F + + +
Sbjct: 386 LLKSSSIEELDFSRNNLMELNPKAFSHLSNVVYI 419
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 142 (55.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 52/157 (33%), Positives = 76/157 (48%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S +S CP +C C IV RG IP D TE+ ++ E+N + +I
Sbjct: 269 SLSSGSCPAVCSC------NNNIVDCRGKGPTLIPSSLPDSMTEI-RL---EQN-SIKSI 317
Query: 110 GP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQ 168
P F ++ L + ++N+ I + F G+ SL L L N IT L F G+ LQ
Sbjct: 318 PPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGLHALQ 377
Query: 169 ELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L+ NKI + ++ F L +L +LSL N+I LA
Sbjct: 378 LLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLA 414
Score = 131 (51.2 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 36/101 (35%), Positives = 51/101 (50%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L P +FQ+ L L ++ +FI AI F G ++ L L N+I+ + D
Sbjct: 110 NRNQLHQLPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGA 169
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ M L+ L L+ N I SIP S F H+ LR L N +
Sbjct: 170 FRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNL 210
Score = 123 (48.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 121 ELHITNSFIPAI-GFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES 179
E + N+ I I F + L+ +NL++N I+ + D F+G ++ EL+L N+++
Sbjct: 537 EPRLNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDL 596
Query: 180 IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQEL 239
S +F L LR+L L +NRIS + N + I P F +Q L
Sbjct: 597 AHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSL 656
Query: 240 KT 241
T
Sbjct: 657 ST 658
Score = 121 (47.7 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 30/94 (31%), Positives = 53/94 (56%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ HL++++++N+ I I F G S+ L+LT N + F+G+ L+ L L
Sbjct: 554 FKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLML 613
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N+I I ++ F L ++R+LSL N ++ +AP
Sbjct: 614 RNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAP 647
Score = 114 (45.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + K SS LQ++ L NR++ +T ++FTN++ L L +SYN L + +F
Sbjct: 763 GNQLSTV-PKELSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAF 821
Query: 354 DPIENSLRDLKISGNNI 370
+ SLR L + GN+I
Sbjct: 822 SGLR-SLRLLSLHGNDI 837
Score = 104 (41.7 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 45/181 (24%), Positives = 80/181 (44%)
Query: 38 LFQVTIFLYLLHSSASVMCPYMCECA---LDDRGR-YEIVCR-------RGDMA--NPIP 84
L +V +++ LL CP +C C+ +D G + + R R ++ N
Sbjct: 9 LLEVCVWVLLLVCKTGSGCPALCTCSGTTVDCHGLGLKNIPRNIPRNTERLELNGNNLTR 68
Query: 85 IGQMDL-GTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSL 143
I + D G + L+++ EN F + + LE L + + + + F +L
Sbjct: 69 INRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAAL 128
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
L+L+ N I ++ F+G +++ L LD N I I F + L VL+L +N IS
Sbjct: 129 SRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNNNISS 188
Query: 204 L 204
+
Sbjct: 189 I 189
Score = 101 (40.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 32/113 (28%), Positives = 50/113 (44%)
Query: 129 IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
IP F P+ LR ++L++N I+ L F+G+ +L L L NKI +P VF L
Sbjct: 317 IPPGAFSPY---KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGL 373
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
L++L L N+I L N I + F ++ ++T
Sbjct: 374 HALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQT 426
Score = 95 (38.5 bits), Expect = 8.3e-09, Sum P(3) = 8.3e-09
Identities = 31/108 (28%), Positives = 51/108 (47%)
Query: 92 TEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN 151
T + KI S + + G F+ + ELH+T + + F G+ LR L L +N
Sbjct: 558 THLKKINLSNNKISEIEDGA-FEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNN 616
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
I+ + + +F G+ N++ L L N + +I F L L L+L N
Sbjct: 617 RISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLAN 664
Score = 95 (38.5 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ ELYLD N++ ++P + S L+++ L++NRIS L YN +
Sbjct: 755 NITELYLDGNQLSTVPKELSSFKS-LQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNAL 813
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
I F ++ L+ + + ++S L +L +G N
Sbjct: 814 RCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAIGAN 859
Score = 88 (36.0 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
++ E+ L+ N I+SIP F LR + L++N+IS+LAP N I
Sbjct: 303 SMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 362
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F + L+ + + + + L +L L L N+
Sbjct: 363 TDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNK 409
Score = 84 (34.6 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 31/147 (21%), Positives = 61/147 (41%)
Query: 334 NLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADM 393
++ E+ + N + + +F P + LR + +S N I +
Sbjct: 303 SMTEIRLEQNSIKSIPPGAFSPYKK-LRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN- 360
Query: 394 NYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI- 452
TD+P+G+F LQ L L+ N + + +Q L+ L L NK + + ++
Sbjct: 361 KITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSS 420
Query: 453 MSEPKNIHKAAKNSFALQSSMGKNAEY 479
+ + +H A+N F ++ A+Y
Sbjct: 421 LRAIQTLH-LAQNPFICDCNLKWLADY 446
Score = 78 (32.5 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 27/120 (22%), Positives = 47/120 (39%)
Query: 249 LENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
+++I P +S L +DL NQ GN + F
Sbjct: 314 IKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGL 373
Query: 309 FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
LQ+L L N++ + F +L NL L + NK+ L +F + +++ L ++ N
Sbjct: 374 HALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLR-AIQTLHLAQN 432
Score = 77 (32.2 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 28/114 (24%), Positives = 46/114 (40%)
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
+F + L+ + L N+++++ AF +++ EL ++ N+LD F +E LR L
Sbjct: 553 AFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEG-LRML 611
Query: 364 KISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
+ N I + D T I G F L LNL N
Sbjct: 612 MLRNNRISCIHNNSFTGLHNVRLLS-LYDNTLTTIAPGAFDTLQSLSTLNLLAN 664
Score = 75 (31.5 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 28/126 (22%), Positives = 49/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L NN+T + +F G+ L+ L L N+I ++ F + +L L L N++ +L
Sbjct: 59 LELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLP 118
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I I + F+ ++K + + I + + L
Sbjct: 119 ELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEV 178
Query: 266 LDLGYN 271
L L N
Sbjct: 179 LTLNNN 184
Score = 73 (30.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 301 LEKSFSSQFK----LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
L+ + S F+ L++L L+ NR++ + +FT L N+ L + N L + +FD +
Sbjct: 594 LDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTL 653
Query: 357 ENSLRDLKISGN 368
+ SL L + N
Sbjct: 654 Q-SLSTLNLLAN 664
Score = 71 (30.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 29/130 (22%), Positives = 47/130 (36%)
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
S+ + L N+I S+ F L+ + L N+I + F L L L L N+I
Sbjct: 303 SMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 362
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
+ L N I + F+D+Q L ++ + +S L
Sbjct: 363 TDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLR 422
Query: 262 DLIYLDLGYN 271
+ L L N
Sbjct: 423 AIQTLHLAQN 432
Score = 70 (29.7 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF++ +L L L N L + T AF+ L +L L + N + L F
Sbjct: 787 NRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFS 846
Query: 355 PIENSLRDLKISGN 368
+ SL L I N
Sbjct: 847 DAQ-SLSHLAIGAN 859
Score = 69 (29.3 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 28/128 (21%), Positives = 52/128 (40%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N + + AF+ L +D+S N++ L +F + SL L + GN I
Sbjct: 309 LEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLR-SLNSLVLYGNKITDLPR 367
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + + F+ +L L+L N +Q + + S +
Sbjct: 368 GVFDGLHALQLLLLNANKIHC-LRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQT 426
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 427 LHLAQNPF 434
Score = 68 (29.0 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQ--SNIKLTHL-----DLSRN-KFKGFDEKSYI 452
G FK HL+ +NLS N + +I + ++ S++ HL DL+ + F+G + +
Sbjct: 552 GAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRML 611
Query: 453 MSEPKNIHKAAKNSF 467
M I NSF
Sbjct: 612 MLRNNRISCIHNNSF 626
Score = 68 (29.0 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 26/103 (25%), Positives = 45/103 (43%)
Query: 77 GDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHP 136
G+ +P G D G L+++ N H FQ Q+L L + ++ I +
Sbjct: 359 GNKITDLPRGVFD-GLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGT 417
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES 179
F + +++ L+L N + D N K + + YL N IE+
Sbjct: 418 FSSLRAIQTLHLAQNPF--ICDCNLKWLAD----YLRSNPIET 454
Score = 61 (26.5 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 27/111 (24%), Positives = 47/111 (42%)
Query: 334 NLIELDISYNKLDRL--EVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIA 391
N+ EL + N+L + E++SF SL+ + +S N I I
Sbjct: 755 NITELYLDGNQLSTVPKELSSF----KSLQLVDLSNNRISSLTNSSFTNMSQLTTL--IL 808
Query: 392 DMNYTD-IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
N IP F L+ L+L GN++ ++ + ++ L+HL + N
Sbjct: 809 SYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAIGAN 859
Score = 56 (24.8 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ +DLS N I E+ P+ F+ ++ L
Sbjct: 327 KLRRIDLSNNQISELAPDAFQGLRSLNSL 355
Score = 56 (24.8 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 26/122 (21%), Positives = 41/122 (33%)
Query: 223 NDIVEINPE-IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
N+I I FK + LK + + I + + + L L NQ
Sbjct: 543 NEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMF 602
Query: 282 XXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
N I SF+ +++L L N L + AF L +L L++
Sbjct: 603 RGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLL 662
Query: 342 YN 343
N
Sbjct: 663 AN 664
Score = 52 (23.4 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 19/98 (19%), Positives = 46/98 (46%)
Query: 172 LDFNKIESIPS-SVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
L+ N+I +I + F L+ L+ ++L++N+IS++ N + +
Sbjct: 540 LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHS 599
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
+F+ ++ L+ R+ + I+ ++ L ++ L L
Sbjct: 600 GMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSL 637
Score = 47 (21.6 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 20/92 (21%), Positives = 32/92 (34%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N I +FS L++
Sbjct: 770 PKELSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRL 829
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++++ F++ +L L I N L
Sbjct: 830 LSLHGNDISELPDGIFSDAQSLSHLAIGANPL 861
Score = 42 (19.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N I + +F + L L N+L + F L L L + N++ + SF
Sbjct: 568 NKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFT 627
Query: 355 PIENSLRDLKISGNNI 370
+ N +R L + N +
Sbjct: 628 GLHN-VRLLSLYDNTL 642
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 98/430 (22%), Positives = 167/430 (38%)
Query: 50 SSASVMCPYM---CECALDDRGRYEIVCRRGDM---ANPIPIGQMDL-----GTEV-LKI 97
SSA + CP + C+C + + + C D+ A + Q+D GT+V ++
Sbjct: 17 SSAEITCPRIPEKCDCKIS-KSMIILSCNGEDVKTIAQTVGTSQIDELHILNGTDVKIES 75
Query: 98 VPSEENPNHLTIGPIFQQF-----QHLEEL--HITNSFIPAIGFHPFWGVPSLRYLNLTH 150
+P + Q F +H+E HIT + F + +L +NL
Sbjct: 76 LPFNGLRTIAILNSTLQSFSPTAWRHVEATIEHITINGNELKTVPVFGNLSTLMSMNLNS 135
Query: 151 NNITSLLDYNFKGMMNLQELYLDFNKI-ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
N I+S+ D F G+ L +L L+ N I + P S+ + L +L ++ N + + +
Sbjct: 136 NQISSIPDKAFNGLSALTQLRLENNAICDFPPKSLDAVKASLVLLDVSGNCLDAIPAQIL 195
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLG 269
N+I EIN ++ L+ + ++ L I+PM + + L YL L
Sbjct: 196 RNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQ 255
Query: 270 YNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAF 329
N N + S L+ + + N + K+ T AF
Sbjct: 256 DNIISTLDGNRLQGFKNLEVLDVSNNALYAL--PSLKDLPNLKQVRVDGNLITKIETLAF 313
Query: 330 TNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXX 389
+N NL + + N + ++ SF+ ++ + + + GNN
Sbjct: 314 SNNPNLQLISVQNNNIVQISRNSFESLDKLV--VLLVGNNSLAKIERGMFDGMKNLQQLS 371
Query: 390 IADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEK 449
I + T + F HL L+L N + DI + KL LDLS NK GF +
Sbjct: 372 IRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNKISGF-KT 430
Query: 450 SYIMSEPKNI 459
S + NI
Sbjct: 431 SVFKKKISNI 440
Score = 180 (68.4 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 70/336 (20%), Positives = 133/336 (39%)
Query: 103 NPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N N L P+F L +++ ++ I +I F G+ +L L L +N I +
Sbjct: 112 NGNELKTVPVFGNLSTLMSMNLNSNQISSIPDKAFNGLSALTQLRLENNAICDFPPKSLD 171
Query: 163 GMM-NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
+ +L L + N +++IP+ + + ++L L L N IS++
Sbjct: 172 AVKASLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQ 231
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
N + I+P F ++ +L+ + + ++ +L LD+ N
Sbjct: 232 NNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNN--ALYALPSL 289
Query: 282 XXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
GN I +FS+ LQ++ ++ N + +++ +F +L L+ L +
Sbjct: 290 KDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLLVG 349
Query: 342 YNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKG 401
N L ++E FD ++N L+ L I NN + DI +G
Sbjct: 350 NNSLAKIERGMFDGMKN-LQQLSIR-NNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEG 407
Query: 402 LFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLD 437
F L +L+LS N + +++ I LD
Sbjct: 408 TFDKLSKLFWLDLSNNKISGFKTSVFKKKISNILLD 443
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 77/336 (22%), Positives = 135/336 (40%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDD- 66
+S L S++L+ N I I + F + T L L ++A +C + + +LD
Sbjct: 125 LSTLMSMNLNSNQISSIPDKAFNGLSALTQL--------RLENNA--ICDFPPK-SLDAV 173
Query: 67 RGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITN 126
+ ++ G+ + IP + ++ + N + + + L EL + N
Sbjct: 174 KASLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMN-LPFLRELRVQN 232
Query: 127 SFIPAIGFHP--FWGVPSLRYLNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSS 183
+ + I HP F VP L+YL L +NI S LD N +G NL+ L + N + ++PS
Sbjct: 233 NTLRRI--HPMAFMNVPQLQYLYL-QDNIISTLDGNRLQGFKNLEVLDVSNNALYALPS- 288
Query: 184 VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFK 243
L +L+ + + N I+K+ N+IV+I+ F+ + +L
Sbjct: 289 -LKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLL 347
Query: 244 CRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEK 303
+ L I M+ + +L L + N N I E
Sbjct: 348 VGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEG 407
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELD 339
+F KL L L N+++ T+ F + I LD
Sbjct: 408 TFDKLSKLFWLDLSNNKISGFKTSVFKKKISNILLD 443
>FB|FBgn0029114 [details] [associations]
symbol:Tollo "Tollo" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0007352 "zygotic specification of dorsal/ventral
axis" evidence=IEA] [GO:0006963 "positive regulation of
antibacterial peptide biosynthetic process" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0009620 "response to fungus" evidence=IEA] [GO:0060049
"regulation of protein glycosylation" evidence=IMP] [GO:0048935
"peripheral nervous system neuron development" evidence=IMP]
[GO:0002227 "innate immune response in mucosa" evidence=IMP]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027202
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 EMBL:AE014296 InterPro:IPR003591 SMART:SM00369
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0004888
GO:GO:0002227 GO:GO:0048935 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00700000104286 GO:GO:0060049 SUPFAM:SSF52200
PANTHER:PTHR24371:SF0 HSSP:O60603 FlyBase:FBgn0029114 EMBL:AF204158
EMBL:AF247764 EMBL:AY118551 RefSeq:NP_524757.1 UniGene:Dm.3403
SMR:Q9V477 IntAct:Q9V477 MINT:MINT-316842 STRING:Q9V477
EnsemblMetazoa:FBtr0075607 GeneID:44497 KEGG:dme:Dmel_CG6890
UCSC:CG6890-RA CTD:44497 InParanoid:Q9V477 OMA:TIRTHNG
GenomeRNAi:44497 NextBio:837325 Uniprot:Q9V477
Length = 1346
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 71/304 (23%), Positives = 126/304 (41%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
L +LN+ N+++ L D F+G+++L+ + L N++ S+P +F L+ + L +N I+
Sbjct: 236 LTHLNMAKNSMSFLADRAFEGLLSLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSIN 295
Query: 203 KLAPRXXXXXXXXXXXXXXYNDIVE--INPEIFKDIQELKTFKCRSCGLENINPMMYSIL 260
LAP N++ IN F ++ L + + + ++ L
Sbjct: 296 VLAPGIFGELAELLVLDLASNELNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPL 355
Query: 261 ADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNR 320
A L L L N N VI +++ L VL L NR
Sbjct: 356 ASLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFNR 415
Query: 321 LAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXX 380
++++ + N + L +L ++ NKL + A ++ L+ L + G N+
Sbjct: 416 ISRMDQRSLVNCSQLQDLHLNDNKLQAVPEA-LAHVQ-LLKTLDV-GENMISQIENTSIT 472
Query: 381 XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSR 440
+ + + T I +G+F LQ LNLS N L+ I Q N +L + L
Sbjct: 473 QLESLYGLRMTENSLTHIRRGVFDRMSSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDG 532
Query: 441 NKFK 444
N+ K
Sbjct: 533 NQLK 536
Score = 186 (70.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 66/270 (24%), Positives = 119/270 (44%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN------ 166
F +F+ LE L ++ + I I + SL++LN ++N I + ++ F ++
Sbjct: 148 FVEFRQLERLDLSLNNIWLIPDGMVCPLKSLQHLNASYNKIQDISNFYFSASLSSRKARV 207
Query: 167 ----LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
LQ L L NK+ S+P+++ L L L++A N +S LA R
Sbjct: 208 CGSTLQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDLSA 267
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXX--XXXX 280
N + + PE+F + ++L+ R+ + + P ++ LA+L+ LDL N+
Sbjct: 268 NRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNELNSQWINAAT 327
Query: 281 XXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340
N + F LQ+L L+ N + ++ F +LTNL L +
Sbjct: 328 FVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTLIL 387
Query: 341 SYNKLDRLEVASFDPIENSLRDLKISGNNI 370
S N++ +E + ++N L L + N I
Sbjct: 388 SRNRISVIEQRTLQGLKNLLV-LSLDFNRI 416
Score = 173 (66.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 50/152 (32%), Positives = 69/152 (45%)
Query: 56 CPYMCECALDDRGRYEIV-CRRGDMANPIPIG-QMDLGTEVLKIVPSEENPNHLTIGPIF 113
CP C C D +V C R +P MD L E +H IG
Sbjct: 757 CPDRCSCYHDQSWTSNVVDCSRASYEQTLPSHIPMDSTQLYLDGNNFRELQSHAFIGR-- 814
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
+ L+ LH+ +S I + F+G+ L L L N + +L F+G+ NLQELYL
Sbjct: 815 ---KRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNGNEFQGLDNLQELYLQ 871
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
N I +I + F HL L++L L HN I+ A
Sbjct: 872 HNAIATIDTLTFTHLYHLKILRLDHNAITSFA 903
Score = 169 (64.5 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 82/365 (22%), Positives = 149/365 (40%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRG 68
S L+SLDLS N +V + P T ML + +L + S+ ++ + A +
Sbjct: 210 STLQSLDLSANKMVSL-P--------TAMLSALGRLTHLNMAKNSMS--FLADRAFEGLL 258
Query: 69 RYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSF 128
+V + +P ++ T+ L+ + N ++ IF + L L + ++
Sbjct: 259 SLRVVDLSANRLTSLP-PELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNE 317
Query: 129 IPA--IGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFM 186
+ + I F G+ L L+L+ N I+ L + F+ + +LQ L L+ N I+ +P +F
Sbjct: 318 LNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFA 377
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
L++L L L+ NRIS + R +N I ++ + +L+
Sbjct: 378 DLTNLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLND 437
Query: 247 CGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFS 306
L+ + P + + L LD+G N N I F
Sbjct: 438 NKLQAV-PEALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFD 496
Query: 307 SQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKIS 366
LQ+L L +N+L + + + L + + N+L + F + N L L IS
Sbjct: 497 RMSSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSI-AGLFTELPN-LVWLNIS 554
Query: 367 GNNIQ 371
GN ++
Sbjct: 555 GNRLE 559
Score = 166 (63.5 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 80/357 (22%), Positives = 140/357 (39%)
Query: 95 LKIVPSEENPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN 152
L++V + + N LT P +F + + L+E+++ N+ I + F + L L+L N
Sbjct: 260 LRVV--DLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNE 317
Query: 153 ITS--LLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXX 210
+ S + F G+ L L L NKI + + +F L+ L++L L N I +L
Sbjct: 318 LNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFA 377
Query: 211 XXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL-DLG 269
N I I + +Q LK S I+ M L + L DL
Sbjct: 378 DLTNLHTLILSRNRISVIEQ---RTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLH 434
Query: 270 YNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFK-LQVLCLKRNRLAKVTTTA 328
N G + +E + +Q + L L + N L +
Sbjct: 435 LNDNKLQAVPEALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGV 494
Query: 329 FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXX---X 385
F +++L L++S NKL +E S + L+ +++ GN ++
Sbjct: 495 FDRMSSLQILNLSQNKLKSIEAGSLQR-NSQLQAIRLDGNQLKSIAGLFTELPNLVWLNI 553
Query: 386 XXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLL-YQSNIKLTHLDLSRN 441
+ +Y+ IP GL Q+L++ N + + N +S + L+ D S N
Sbjct: 554 SGNRLEKFDYSHIPIGL-------QWLDVRANRITQLGNYFEIESELSLSTFDASYN 603
Score = 155 (59.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 75/315 (23%), Positives = 121/315 (38%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES--IPSSVFMHLSDLRVLSLAHNR 200
L+ + L +N+I L F + L L L N++ S I ++ F+ L L +L L+ N+
Sbjct: 284 LQEIYLRNNSINVLAPGIFGELAELLVLDLASNELNSQWINAATFVGLKRLMMLDLSANK 343
Query: 201 ISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSIL 260
IS+L N I ++ IF D+ L T + I L
Sbjct: 344 ISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQGL 403
Query: 261 ADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNR 320
+L+ L L +N+ N + E Q L+ L + N
Sbjct: 404 KNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPEALAHVQL-LKTLDVGENM 462
Query: 321 LAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXX 380
++++ T+ T L +L L ++ N L + FD + +SL+ L +S N ++
Sbjct: 463 ISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRM-SSLQILNLSQNKLKSIEAGSLQR 521
Query: 381 XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSR 440
D N GLF P+L +LN+SGN L+ I L LD+
Sbjct: 522 NSQLQAIRL--DGNQLKSIAGLFTELPNLVWLNISGNRLEKFD--YSHIPIGLQWLDVRA 577
Query: 441 NKFKGFDEKSYIMSE 455
N+ I SE
Sbjct: 578 NRITQLGNYFEIESE 592
Score = 108 (43.1 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 49/233 (21%), Positives = 96/233 (41%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L++LH+ ++ + A+ V L+ L++ N I+ + + + + +L L + N +
Sbjct: 430 LQDLHLNDNKLQAVP-EALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLT 488
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
I VF +S L++L+L+ N++ + N + I +F ++
Sbjct: 489 HIRRGVFDRMSSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSI-AGLFTELPN 547
Query: 239 LKTFKCRSCGLENINPMMYS-ILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHF 297
L LE + YS I L +LD+ N+ +
Sbjct: 548 LVWLNISGNRLEKFD---YSHIPIGLQWLDVRANRITQLGNYFEIESELSLSTFDAS--Y 602
Query: 298 PVILEKSFSS-QFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
++ E + SS ++VL L N+++K+ F NL +D+ N+L LE
Sbjct: 603 NLLTEITASSIPNSVEVLYLNDNQISKIQPYTFFKKPNLTRVDLVRNRLTTLE 655
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 12/58 (20%), Positives = 28/58 (48%)
Query: 394 NYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
N+ ++ F L+ L+L+ + ++ +HN + ++L L L N+ K + +
Sbjct: 802 NFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNGNEF 859
Score = 50 (22.7 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 412 LNLSGNNLQDI--HNLLYQSNIKLTHLDLSR 440
L L GNN +++ H + + +K+ HL+ SR
Sbjct: 796 LYLDGNNFRELQSHAFIGRKRLKVLHLNHSR 826
Score = 50 (22.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 4 TLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
T + + +L LDLS N I + IF+ + +L
Sbjct: 327 TFVGLKRLMMLDLSANKISRLEAHIFRPLASLQIL 361
>UNIPROTKB|E2RPH7 [details] [associations]
symbol:ECM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070052 "collagen V binding" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0010811 "positive regulation of cell-substrate adhesion"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0005614 "interstitial matrix" evidence=IEA] InterPro:IPR001611
InterPro:IPR001007 Pfam:PF00093 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS51450 SMART:SM00214 GO:GO:0030198 GO:GO:0008201
GO:GO:0010811 GeneTree:ENSGT00700000104006 GO:GO:0005614
InterPro:IPR026906 Pfam:PF13306 OMA:AVWSPKP EMBL:AAEX03000683
Ensembl:ENSCAFT00000003615 Uniprot:E2RPH7
Length = 700
Score = 198 (74.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 69/241 (28%), Positives = 104/241 (43%)
Query: 136 PFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES--IPSSVFMHLSDLRV 193
P G P + L L+ N+IT++ D F G+ NL+ L L N I S I F L L
Sbjct: 340 PLTG-PEITSLELSGNSITAIPDEAFNGLPNLERLDLSKNNITSPGIGPKAFKRLKKLMR 398
Query: 194 LSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE--N 251
L+L N ++++ N + ++ E D+ +L T + L N
Sbjct: 399 LNLDGNNLAEIPSELPSALEELKINE---NGLQAVSEESLSDLNQLVTLELEGNNLSETN 455
Query: 252 INPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKL 311
+NP+ + L L YL LG N+ NH I E F+ K+
Sbjct: 456 VNPLAFKSLKSLSYLRLGRNKFRIIPQGLPASIEELYLE---NNHIEEITEICFNHTRKI 512
Query: 312 QVLCLKRNRLA--KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNN 369
++ L+ N+L ++ A+ N NL +D+SYNKL V S+ P SL L + GN
Sbjct: 513 NIIVLRYNKLEENRIAPLAWINQENLESIDLSYNKL--YHVPSYLP--KSLLHLVLLGNQ 568
Query: 370 I 370
I
Sbjct: 569 I 569
Score = 148 (57.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 80/347 (23%), Positives = 136/347 (39%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITS--LLDYNFKGMMNLQELYLDFNK 176
+ L ++ + I AI F G+P+L L+L+ NNITS + FK + L L LD N
Sbjct: 346 ITSLELSGNSITAIPDEAFNGLPNLERLDLSKNNITSPGIGPKAFKRLKKLMRLNLDGNN 405
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE--INPEIFK 234
+ IPS + L +L++ N + ++ N++ E +NP FK
Sbjct: 406 LAEIPSELPSALEELKI---NENGLQAVSEESLSDLNQLVTLELEGNNLSETNVNPLAFK 462
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
++ L + I + + + +L YL+ + +
Sbjct: 463 SLKSLSYLRLGRNKFRIIPQGLPASIEEL-YLENNHIEEITEICFNHTRKINIIVLRYNK 521
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
I ++ +Q L+ + L N+L V + +L +L+ L N++DR+ F
Sbjct: 522 LEENRIAPLAWINQENLESIDLSYNKLYHVPSYLPKSLLHLVLLG---NQIDRIPGYVFG 578
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXI-ADMN-YTDIPKGLFKMNPHLQFL 412
+E L L +S N + + D N IP G+ +M L FL
Sbjct: 579 HMEPGLEYLYLSFNRLSDDGVDQVSFYGAYHSLRELFLDHNDLKSIPPGVREMKA-LHFL 637
Query: 413 NLSGNNLQDIH-----NLLYQSNIKLTHLDLSRNKFKGFDEKSYIMS 454
L+ N +++I N + L HL L N K + SY S
Sbjct: 638 RLNNNKIRNILPEQICNAEEDGDSTLEHLHLENNYIKTREISSYAFS 684
>UNIPROTKB|Q1KS52 [details] [associations]
symbol:ALS "Acid-labile subunit" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816
HOGENOM:HOG000116109 OMA:FCGLGEL EMBL:CU929968 EMBL:DQ459343
EMBL:DQ459344 RefSeq:NP_001041651.1 UniGene:Ssc.16015 STRING:Q1KS52
Ensembl:ENSSSCT00000008781 GeneID:397322 KEGG:ssc:397322
Uniprot:Q1KS52
Length = 606
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 81/340 (23%), Positives = 137/340 (40%)
Query: 112 IFQQFQHLEELHIT-NSF--IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQ 168
+FQ +L +L++ NS +P FH G+ +LR L L N +T L F G+ L+
Sbjct: 165 LFQGLTNLWDLNLGWNSLAVLPDTAFH---GLANLRELVLAGNKLTYLQPALFCGLGELR 221
Query: 169 ELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI 228
EL L N + S+ ++VF+ L L+ L L HN ++ +AP +N + +
Sbjct: 222 ELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGL 281
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXX 288
+ F + L + L ++ P + L L L LG+N+
Sbjct: 282 LEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLE 341
Query: 289 XXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
N I +F F + V+ L N L + F L L L + ++ L R+
Sbjct: 342 VLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRV 401
Query: 349 EVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPH 408
+ +F + + LR L + N ++ A+ T +P LF+
Sbjct: 402 GLHTFAGL-SGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTAN-RLTHLPGRLFQGLGK 459
Query: 409 LQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
L++L LS N L + + LD+S N+ + E
Sbjct: 460 LEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPE 499
Score = 187 (70.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 85/396 (21%), Positives = 147/396 (37%)
Query: 56 CPYMCECALDD-RGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQ 114
CP C C DD + C ++ +P G D L + N + + G F+
Sbjct: 41 CPAACSCGHDDYTDELSVFCSSRNLTQ-LPDGIPD-AARALWL--DSNNFSSVPAGA-FR 95
Query: 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
L L++ S + ++ G+ +L +L+L N + SL + F L L L
Sbjct: 96 NLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHN 155
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
N + + +F L++L L+L N ++ L N + + P +F
Sbjct: 156 NLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFC 215
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
+ EL+ L ++ ++ L L L L +N
Sbjct: 216 GLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSH 275
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +LE +F L VL L N LA + F +L L EL + +N+L +L +F+
Sbjct: 276 NRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFE 335
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ L L ++ N IQ + ++P+ +F+ L L+L
Sbjct: 336 GL-GQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNC-LRNLPEQVFRGLGKLHSLHL 393
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKS 450
+ L + + L L L N + DE+S
Sbjct: 394 EHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQS 429
Score = 184 (69.8 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 76/344 (22%), Positives = 131/344 (38%)
Query: 105 NHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N L + P F +L EL + + + + F G+ LR L+L+ N + S+ F
Sbjct: 180 NSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFV 239
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
+ LQ+LYLD N + ++ F+ + LR L L+HNR+ L +
Sbjct: 240 KLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAH 299
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N + + P FKD+ L+ + L + + L L L L NQ
Sbjct: 300 NALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFL 359
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
GN + E+ F KL L L+ + L +V F L+ L L +
Sbjct: 360 GLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKD 419
Query: 343 NKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGL 402
N L+ ++ S + L +L ++ N + ++ + +P
Sbjct: 420 NGLEAIDEQSLWGLAELL-ELDLTANRL-THLPGRLFQGLGKLEYLLLSRNRLSALPADA 477
Query: 403 FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
+L++S N LQ + + +L +L L N + F
Sbjct: 478 LGPLQRTFWLDVSHNRLQALPEAVLAPLGQLRYLSLRNNSLRTF 521
Score = 155 (59.6 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 59/254 (23%), Positives = 104/254 (40%)
Query: 1 MEFTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMC 60
+E T + L L L++N + + P FKD+ L + L L H+ + P
Sbjct: 282 LEDTFPGLLGLHVLRLAHNALASLRPRTFKDLH---FLEE----LQLGHNRLRQL-P--- 330
Query: 61 ECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLE 120
E A + G+ E++ + I G LG + ++ N +F+ L
Sbjct: 331 EKAFEGLGQLEVLALNDNQIQEIKAGAF-LGLFNVAVMNLSGNCLRNLPEQVFRGLGKLH 389
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
LH+ +S + +G H F G+ LR L L N + ++ + + G+ L EL L N++ +
Sbjct: 390 SLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHL 449
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
P +F L L L L+ NR+S L +N + + + + +L+
Sbjct: 450 PGRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQLR 509
Query: 241 TFKCRSCGLENINP 254
R+ L P
Sbjct: 510 YLSLRNNSLRTFVP 523
>FB|FBgn0033250 [details] [associations]
symbol:CG14762 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104056
EMBL:AY060601 RefSeq:NP_610346.1 UniGene:Dm.3950 SMR:Q7K2X5
EnsemblMetazoa:FBtr0088867 GeneID:35768 KEGG:dme:Dmel_CG14762
UCSC:CG14762-RA FlyBase:FBgn0033250 InParanoid:Q7K2X5
OrthoDB:EOG4N8PM4 GenomeRNAi:35768 NextBio:795128 Uniprot:Q7K2X5
Length = 470
Score = 194 (73.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 73/325 (22%), Positives = 133/325 (40%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN--LQELYLDFNKIES 179
L + ++ +P + F + +R+L + HN+ + ++ N + L +L + N++++
Sbjct: 86 LKLRHNNLPKLQGFVFLAL-DIRHLTI-HNSSLAAIEENALSSLGAGLTQLDVSLNQMKT 143
Query: 180 IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE- 238
+PS HL L +L+L HN+I+ + N I +I+PE F+ +++
Sbjct: 144 VPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDH 203
Query: 239 LKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFP 298
+K L NI SIL+ L L++ N+ N
Sbjct: 204 IKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMIT 263
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLT-NLIELDISYNKLDRLEVASFDPIE 357
+ FS L L L+ N+++ + AF L NL L + N++ + + P+
Sbjct: 264 TVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLH 323
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
LR L + NNI + + +P LF+ L+ LNL N
Sbjct: 324 R-LRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNN 382
Query: 418 NLQDIHNLLYQSNIK-LTHLDLSRN 441
LQ I + + I L +D++ N
Sbjct: 383 KLQRIPQDIMEPVIDTLRIIDITDN 407
Score = 189 (71.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 69/286 (24%), Positives = 122/286 (42%)
Query: 87 QMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYL 146
Q+D+ +K VPS+ Q HL L++ ++ I I + F G+ +L L
Sbjct: 133 QLDVSLNQMKTVPSQA----------LQHLFHLLILNLNHNKITVIHNNAFEGLETLEIL 182
Query: 147 NLTHNNITSLLDYNFKGMMN-LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L N IT + F+G+ + ++ L L N + +IP LS L+ L + N+I ++
Sbjct: 183 TLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTIS 242
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILAD-LI 264
+N I + +F + L + + + I+ + L + L
Sbjct: 243 EGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQ 302
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQF--KLQVLCLKRNRLA 322
YL LG NQ N+ V+ E +F+ F L L L++N +
Sbjct: 303 YLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTG-FGDSLTFLNLQKNDIK 361
Query: 323 KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
+ + F NL +L L++ NKL R+ +P+ ++LR + I+ N
Sbjct: 362 VLPSLLFENLNSLETLNLQNNKLQRIPQDIMEPVIDTLRIIDITDN 407
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 66/307 (21%), Positives = 123/307 (40%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL-SDLRVLSLAHN 199
P + YL L HNN+ L + F + +++ L + + + +I + L + L L ++ N
Sbjct: 81 PIIFYLKLRHNNLPKLQGFVFLAL-DIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLN 139
Query: 200 RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSI 259
++ + + +N I I+ F+ ++ L+ + I+P +
Sbjct: 140 QMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRG 199
Query: 260 LADLIY-LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKR 318
L D I L+LG N N I E F L L L
Sbjct: 200 LEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAH 259
Query: 319 NRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXX 378
N + V F++LT L L++ NK+ ++ +F +E +L+ L++ N I
Sbjct: 260 NMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEAL 319
Query: 379 XXXXXXXXXXXIADMNYTDIPKGLFK-MNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLD 437
+ + N + + F L FLNL N+++ + +LL+++ L L+
Sbjct: 320 RPLHRLRHLD-LRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLN 378
Query: 438 LSRNKFK 444
L NK +
Sbjct: 379 LQNNKLQ 385
>ZFIN|ZDB-GENE-031113-8 [details] [associations]
symbol:lrrc15 "leucine rich repeat containing 15"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-031113-8
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104286
OMA:NHLEYIP EMBL:BX950188 EMBL:BX957243 IPI:IPI00628487
UniGene:Dr.18765 Ensembl:ENSDART00000104248 HOVERGEN:HBG095770
Uniprot:B0S8K3
Length = 564
Score = 195 (73.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 98/409 (23%), Positives = 165/409 (40%)
Query: 38 LFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKI 97
LF V I + + + AS CP C+C + +IVC+ G IP+ + + +
Sbjct: 5 LF-VIIGMCAMKAVAS-SCPESCQCQVT-----KIVCQ-GFSVKEIPL---PMPPTINAL 53
Query: 98 VPSEENPNHLTIGPI-FQQFQHLEELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNITS 155
V S N + ++ P FQ F L + NS I + H F +L L + +TS
Sbjct: 54 VIS--NTSIQSLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTMLTS 111
Query: 156 LLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXX 215
L D F+ + L L L NK+E +PSS+ L ++ L L+ N +S L+
Sbjct: 112 LPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSEDAFRGLDQL 171
Query: 216 XXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXX 275
N I +++ F+ + L++ + L +I ++ L +L L L N+
Sbjct: 172 EMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQDNKIEQ 231
Query: 276 XXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNL 335
N ++ F + L L NRL+++ F + L
Sbjct: 232 LPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPETFGPMA-L 290
Query: 336 IELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNY 395
EL + N L LE F + N +R L IS N IQ +
Sbjct: 291 QELWLYDNLLTHLEENVFSNLTN-IRLLVISRNRIQYISPGAFNGLIELKEVSLHTN-RL 348
Query: 396 TDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
T+I G+F+ P+L +++ N ++ I L +L+ L++ N +
Sbjct: 349 TNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRLSLLEMQNNSLQ 397
Score = 178 (67.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 78/372 (20%), Positives = 143/372 (38%)
Query: 2 EFTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCE 61
E L + +L +S I + P F+ +T LF +S+ + + P+
Sbjct: 41 EIPLPMPPTINALVISNTSIQSLKPSDFQTFAETLTLFVAK------NSNITEVEPH--- 91
Query: 62 CALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQHL 119
D ++ G M +P T + + S N L + P + ++
Sbjct: 92 -TFDQAFNLNVLGFSGTMLTSLPDNLFQNLTALTTLTLSG---NKLEVLPSSLLTPLVNV 147
Query: 120 EELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES 179
+L ++ + + ++ F G+ L L L N+I L F+G+ +L+ L+L N++
Sbjct: 148 NKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTD 207
Query: 180 IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQEL 239
IP+ +F L +L VL L N+I +L N + + IF ++ L
Sbjct: 208 IPAGLFDDLVNLEVLHLQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNL 267
Query: 240 KTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPV 299
F L + P + +A L L L N N
Sbjct: 268 THFSLYDNRLSRLMPETFGPMA-LQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQY 326
Query: 300 ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS 359
I +F+ +L+ + L NRL + F L NL + I N++ ++ + D +
Sbjct: 327 ISPGAFNGLIELKEVSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSR- 385
Query: 360 LRDLKISGNNIQ 371
L L++ N++Q
Sbjct: 386 LSLLEMQNNSLQ 397
Score = 139 (54.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 51/247 (20%), Positives = 98/247 (39%)
Query: 91 GTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTH 150
G + L+++ + N FQ HL L + + + I F + +L L+L
Sbjct: 167 GLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQD 226
Query: 151 NNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXX 210
N I L F + L++LYL N++ +PS +F++L +L SL NR+S+L P
Sbjct: 227 NKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPETFG 286
Query: 211 XXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGY 270
N + + +F ++ ++ ++ I+P ++ L +L + L
Sbjct: 287 PMALQELWLYD-NLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAFNGLIELKEVSLHT 345
Query: 271 NQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFT 330
N+ N I + +L +L ++ N L + F
Sbjct: 346 NRLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRLSLLEMQNNSLQNLPKD-FL 404
Query: 331 NLTNLIE 337
N +++E
Sbjct: 405 NTLSIVE 411
Score = 137 (53.3 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 57/239 (23%), Positives = 97/239 (40%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ LE L + + I + F G+ LR L L N +T + F ++NL+ L+L
Sbjct: 165 FRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHL 224
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY-NDIVEINPE 231
NKIE +P+++F + L+ L L+ NR+S L P Y N + + PE
Sbjct: 225 QDNKIEQLPANLFAKVQKLKKLYLSSNRLS-LLPSGIFLNLPNLTHFSLYDNRLSRLMPE 283
Query: 232 IFKD--IQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
F +QEL + LE N ++S L ++ L + N+
Sbjct: 284 TFGPMALQELWLYDNLLTHLEE-N--VFSNLTNIRLLVISRNRIQYISPGAFNGLIELKE 340
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
N I F L + ++ N++ ++ ++ L L++ N L L
Sbjct: 341 VSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRLSLLEMQNNSLQNL 399
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 195 (73.7 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 59/225 (26%), Positives = 96/225 (42%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L N+I L F G+ L LYLD N I S+ F + L+ L L+ N+I+ L
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
+ YN + + E FK +++L RS L+ + ++ +L +
Sbjct: 126 NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDF 185
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LDLGYN+ N F I F F L+ + L+ NR+ V+
Sbjct: 186 LDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVS 245
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
++L LD+S N + +E +F + N L+ L + N +
Sbjct: 246 QGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPN-LQKLNLDSNKL 289
Score = 163 (62.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 62/275 (22%), Positives = 104/275 (37%)
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN 229
+Y + + IP ++ + LSL N I KL +N I ++
Sbjct: 45 VYCESHAFADIPENIS---GGSQGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVD 101
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
+ F+ I+ LK S + ++ + + +L LDL YN+
Sbjct: 102 EDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLII 161
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
N + + F L L L NRL ++ AF L L EL + +N+ ++
Sbjct: 162 LHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKIN 221
Query: 350 VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
A F + N LR + + N I+ ++ + I G FK P+L
Sbjct: 222 FAHFPRLFN-LRSIYLQWNRIRSVSQGLTWTWSSLHTLD-LSGNDIQAIEPGTFKCLPNL 279
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
Q LNL N L ++ + I L + LS N ++
Sbjct: 280 QKLNLDSNKLTNVSQETVNAWISLISITLSGNMWE 314
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 72/307 (23%), Positives = 116/307 (37%)
Query: 37 MLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLK 96
+LF T+ L +L + A CP C C D + Y D+ I G L
Sbjct: 17 VLFP-TLLLVML-TGAQRACPKNCRC--DGKIVYCESHAFADIPENISGGSQGLSLRFNS 72
Query: 97 IVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSL 156
I + N F L L++ +++I ++ F G+ L+ L L+ N IT L
Sbjct: 73 IQKLKSNQ--------FAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYL 124
Query: 157 LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXX 216
+ F + NL+ L L +NK++++ S F L L +L L N + + R
Sbjct: 125 HNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLD 184
Query: 217 XXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXX 276
YN + ++ F + +LK IN + L +L + L +N+
Sbjct: 185 FLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSV 244
Query: 277 XXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLI 336
GN I +F LQ L L N+L V+ +LI
Sbjct: 245 SQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISLI 304
Query: 337 ELDISYN 343
+ +S N
Sbjct: 305 SITLSGN 311
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 195 (73.7 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 59/225 (26%), Positives = 96/225 (42%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L N+I L F G+ L LYLD N I S+ F + L+ L L+ N+I+ L
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
+ YN + + E FK +++L RS L+ + ++ +L +
Sbjct: 126 NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDF 185
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LDLGYN+ N F I F F L+ + L+ NR+ V+
Sbjct: 186 LDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVS 245
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
++L LD+S N + +E +F + N L+ L + N +
Sbjct: 246 QGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPN-LQKLNLDSNKL 289
Score = 163 (62.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 62/275 (22%), Positives = 104/275 (37%)
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN 229
+Y + + IP ++ + LSL N I KL +N I ++
Sbjct: 45 VYCESHAFADIPENIS---GGSQGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVD 101
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
+ F+ I+ LK S + ++ + + +L LDL YN+
Sbjct: 102 EDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLII 161
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
N + + F L L L NRL ++ AF L L EL + +N+ ++
Sbjct: 162 LHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKIN 221
Query: 350 VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
A F + N LR + + N I+ ++ + I G FK P+L
Sbjct: 222 FAHFPRLFN-LRSIYLQWNRIRSVSQGLTWTWSSLHTLD-LSGNDIQAIEPGTFKCLPNL 279
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
Q LNL N L ++ + I L + LS N ++
Sbjct: 280 QKLNLDSNKLTNVSQETVNAWISLISITLSGNMWE 314
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 72/307 (23%), Positives = 116/307 (37%)
Query: 37 MLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLK 96
+LF T+ L +L + A CP C C D + Y D+ I G L
Sbjct: 17 VLFP-TLLLVML-TGAQRACPKNCRC--DGKIVYCESHAFADIPENISGGSQGLSLRFNS 72
Query: 97 IVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSL 156
I + N F L L++ +++I ++ F G+ L+ L L+ N IT L
Sbjct: 73 IQKLKSNQ--------FAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYL 124
Query: 157 LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXX 216
+ F + NL+ L L +NK++++ S F L L +L L N + + R
Sbjct: 125 HNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLD 184
Query: 217 XXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXX 276
YN + ++ F + +LK IN + L +L + L +N+
Sbjct: 185 FLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSV 244
Query: 277 XXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLI 336
GN I +F LQ L L N+L V+ +LI
Sbjct: 245 SQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISLI 304
Query: 337 ELDISYN 343
+ +S N
Sbjct: 305 SITLSGN 311
>TAIR|locus:2074633 [details] [associations]
symbol:RLP35 "AT3G11080" species:3702 "Arabidopsis
thaliana" [GO:0006952 "defense response" evidence=ISS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG4886
EMBL:AC009991 EMBL:AC073395 InterPro:IPR013210 Pfam:PF08263
HOGENOM:HOG000116562 ProtClustDB:CLSN2683476 IPI:IPI00520283
RefSeq:NP_187719.1 UniGene:At.39809 ProteinModelPortal:Q9SRL7
SMR:Q9SRL7 EnsemblPlants:AT3G11080.1 GeneID:820279
KEGG:ath:AT3G11080 TAIR:At3g11080 InParanoid:Q9SRL7 OMA:SNQFSGQ
PhylomeDB:Q9SRL7 Genevestigator:Q9SRL7 Uniprot:Q9SRL7
Length = 943
Score = 185 (70.2 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 84/362 (23%), Positives = 140/362 (38%)
Query: 118 HLEELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
HL L ++ N F I + +L +L+L N+ + + + L LYL +N
Sbjct: 198 HLTSLELSSNQFSGQIP-SSIGNLSNLTFLSLPSNDFFGQIPSSIGNLARLTYLYLSYNN 256
Query: 177 -IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKD 235
+ IPSS F +L+ L VL + N++S P +N P
Sbjct: 257 FVGEIPSS-FGNLNQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQFTGTIPNNISL 315
Query: 236 IQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG- 294
+ L F+ + P + LI LDL NQ G
Sbjct: 316 LSNLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNGTLHFGNISSPSNLQYLIIGS 375
Query: 295 NHFPVILEKSFSSQFKLQVLCLKR--NRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N+F + +S S L + L + V + F++L +L +L +SY +++
Sbjct: 376 NNFIGTIPRSLSRFVNLTLFDLSHLNTQCRPVDFSIFSHLKSLDDLRLSYLTTTTIDLND 435
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXX--XXXXXXXXIADMNYTDIPKGLFKMNPHLQ 410
P +LR L ISGN + ++ TD P+ + + L
Sbjct: 436 ILPYFKTLRSLDISGNLVSATNKSSVSSDPPSQSIQSLYLSGCGITDFPE-ILRTQHELG 494
Query: 411 FLNLSGNNLQ-DIHNLLYQSNIKLTHLDLSRNKFKGFDE--KSYIMS---EPKNIHKAAK 464
FL++S N ++ + L+ L +L+LS N F F+ K + +S +P IH A
Sbjct: 495 FLDVSNNKIKGQVPGWLWTLP-NLFYLNLSNNTFISFESSSKKHGLSSVRKPSMIHLFAS 553
Query: 465 NS 466
N+
Sbjct: 554 NN 555
Score = 121 (47.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 65/269 (24%), Positives = 96/269 (35%)
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
SS+F L +LRVL L N + P YN + + P +++ L +
Sbjct: 119 SSLF-RLQNLRVLDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTS 177
Query: 242 FKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVIL 301
S P L+ L L+L NQ N F +
Sbjct: 178 LHLSSNQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQI 237
Query: 302 EKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
S + +L L L N ++F NL LI L + NKL S + L
Sbjct: 238 PSSIGNLARLTYLYLSYNNFVGEIPSSFGNLNQLIVLQVDSNKLSGNVPISLLNLTR-LS 296
Query: 362 DLKISGNNIQXXXXXXXXXXXXXXXXXXIADMN-YTD-IPKGLFKMNPHLQFLNLSGNNL 419
L +S N Q A N +T +P LF + P ++ L+LS N L
Sbjct: 297 ALLLSHN--QFTGTIPNNISLLSNLMDFEASNNAFTGTLPSSLFNIPPLIR-LDLSDNQL 353
Query: 420 QD-IH--NLLYQSNIKLTHLDLSRNKFKG 445
+H N+ SN++ +L + N F G
Sbjct: 354 NGTLHFGNISSPSNLQ--YLIIGSNNFIG 380
Score = 120 (47.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 67/305 (21%), Positives = 109/305 (35%)
Query: 121 ELHITNSFIPAIGFHP---FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK- 176
EL ++ S++ FH + + +LR L+LT N++ + + + +L L+L +N+
Sbjct: 103 ELDLSCSWLYG-SFHSNSSLFRLQNLRVLDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQF 161
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ IPSS+ +LS L L L+ N+ S P N P ++
Sbjct: 162 LGLIPSSI-ENLSRLTSLHLSSNQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNL 220
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L S P LA L YL L YN N
Sbjct: 221 SNLTFLSLPSNDFFGQIPSSIGNLARLTYLYLSYNNFVGEIPSSFGNLNQLIVLQVDSNK 280
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
+ S + +L L L N+ + L+NL++ + S N +S I
Sbjct: 281 LSGNVPISLLNLTRLSALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFTGTLPSSLFNI 340
Query: 357 ENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD-IPKGLFKMNPHLQFLNLS 415
+R L +S N + I N+ IP+ L + +L +LS
Sbjct: 341 PPLIR-LDLSDNQLNGTLHFGNISSPSNLQYLIIGSNNFIGTIPRSLSRF-VNLTLFDLS 398
Query: 416 GNNLQ 420
N Q
Sbjct: 399 HLNTQ 403
Score = 101 (40.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 45/180 (25%), Positives = 71/180 (39%)
Query: 95 LKIVPSEENPNHLTIGPIFQQFQHLEELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNI 153
L+++ +N I HL LH++ N F+ I + L L+L+ N
Sbjct: 127 LRVLDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIP-SSIENLSRLTSLHLSSNQF 185
Query: 154 TSLLDYNFKGMMNLQELYLDFNKIES-IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXX 212
+ + + + +L L L N+ IPSS+ +LS+L LSL N P
Sbjct: 186 SGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIG-NLSNLTFLSLPSNDFFGQIPSSIGNL 244
Query: 213 XXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
YN+ V P F ++ +L + S L P+ L L L L +NQ
Sbjct: 245 ARLTYLYLSYNNFVGEIPSSFGNLNQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQ 304
Score = 68 (29.0 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 20/52 (38%), Positives = 25/52 (48%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
GN F + KS +L VL L N ++ NLT L LD+S NKL
Sbjct: 763 GNKFEGEIPKSIGLLKELLVLNLSNNAFGGHIPSSMGNLTALESLDVSQNKL 814
Score = 53 (23.7 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 434 THLDLSRNKFKGFDEKSYIMSEPKNIHKAAKNSFA--LQSSMG 474
T LD S NKF+G KS + + + + N+F + SSMG
Sbjct: 757 TALDFSGNKFEGEIPKSIGLLKELLVLNLSNNAFGGHIPSSMG 799
Score = 52 (23.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 22/52 (42%), Positives = 26/52 (50%)
Query: 397 DIPK--GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIK-LTHLDLSRNKFKG 445
+IPK GL K L LNLS NN H N+ L LD+S+NK G
Sbjct: 769 EIPKSIGLLK---ELLVLNLS-NNAFGGHIPSSMGNLTALESLDVSQNKLTG 816
Score = 48 (22.0 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+S L SL LSYN + + P +++ T L
Sbjct: 148 LSHLTSLHLSYNQFLGLIPSSIENLSRLTSL 178
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 201 (75.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 95/381 (24%), Positives = 163/381 (42%)
Query: 92 TEVLKIVPSEENPNHLTIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTH 150
TE L+ + E N LT P+ HL+ L++T++ I + P + +LR L+L+
Sbjct: 524 TETLEYLDLERN--RLTTVPVALSSLHHLKYLYLTSNQISQLNNLPSF-TENLRVLSLSG 580
Query: 151 NNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFM---HLSDLRVLSLAHNRISKLAPR 207
NN + + K L L + +N I IP +F S+L+ + L +N+I+ L
Sbjct: 581 NNFSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLG 640
Query: 208 XXXXXXXXXXXXXXYNDIVEINPEIFKDIQE-LK-------TFKCRSCGLENINPMMYSI 259
+NDI +P +F+++ LK F RS LE+++P+ +
Sbjct: 641 SFAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAVFPARS--LESLDPLDALL 698
Query: 260 -LADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKR 318
L+ LI+L L N+ + +SF+ +L + L
Sbjct: 699 PLSQLIWLGLD------------------------NNNLKQVSNESFAQMRELSYINLSF 734
Query: 319 NRLAKVTTTAFTN--LTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXX 376
N+L + F + ++L+E+D+SYN L+RLE +F + L+ L + N ++
Sbjct: 735 NQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSL-GDLQTLNLQSNRLRTIARH 793
Query: 377 XXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNL--QDIHNLLYQSNIKLT 434
++ +I G F + P+L L+L N L + + LY SN
Sbjct: 794 AFHNLEFLRYLD-LSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTP 852
Query: 435 -HLDLSRNKFKGF-DEKSYIM 453
L++S N F DE S M
Sbjct: 853 LRLNVSHNHIASFYDELSSYM 873
Score = 178 (67.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 63/300 (21%), Positives = 123/300 (41%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
++L++N + L F + +LQ L L N++ +I F +L LR L L++NR+ ++
Sbjct: 756 IDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNIS 815
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
+N + ++ + F + T R N Y L+ +Y
Sbjct: 816 HGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTT-PLRLNVSHNHIASFYDELSSYMY 874
Query: 266 ---LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLA 322
LD+ +N N + +F L++L + N L
Sbjct: 875 IYQLDISHNHVTKSDSFTNLANTLRFLNLAH-NQLGSLQSHAFGDLEFLEILNVAHNNLT 933
Query: 323 KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXX 382
+ +F L +L ELD+S+N+LD+L+V F + LR L+I+ N ++
Sbjct: 934 SLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRK-LRILRINSNRLRALPREVFMNTR 992
Query: 383 XXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
++ +P + L+ + +S NNL+ + ++ ++ L + L+RN+
Sbjct: 993 LEFLDIAENQLSVWPVP-AFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNR 1051
Score = 177 (67.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 89/448 (19%), Positives = 177/448 (39%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASV-----MCPY--MC 60
+ +++ + LS+NDI +P +F+++ T + +++ ++ S S+ + P +
Sbjct: 645 LEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQLI 704
Query: 61 ECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQ--FQH 118
LD+ ++ A + ++L LK +P G +FQ H
Sbjct: 705 WLGLDNNNLKQV--SNESFAQMRELSYINLSFNQLKTLPR---------G-LFQSDAHSH 752
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L E+ ++ + + + F + L+ LNL N + ++ + F + L+ L L +N++
Sbjct: 753 LVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLV 812
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXX---XXXXYNDIVEINPEI--F 233
+I F L +L L L HN++ L+ + +N I E+ +
Sbjct: 813 NISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSY 872
Query: 234 KDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXX 293
I +L ++ ++ L +L+L +NQ
Sbjct: 873 MYIYQLDISHNHVTKSDSFT----NLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVA 928
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
N+ + +SF LQ L L N+L ++ F+NL L L I+ N+L L F
Sbjct: 929 HNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVF 988
Query: 354 DPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLN 413
+ L L I+ N + ++ N + +F + L ++
Sbjct: 989 --MNTRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDIS 1046
Query: 414 LSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
L+ N + + + + LT+LDLS+N
Sbjct: 1047 LARNRITILPDNTFSFLNNLTNLDLSQN 1074
Score = 174 (66.3 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 74/325 (22%), Positives = 130/325 (40%)
Query: 138 WGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLS-DLRVLSL 196
WG +L+ + L +N IT L +F G+ +QE+ L FN I VF ++S L++L L
Sbjct: 620 WG-SNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILEL 678
Query: 197 AH-----NRISKLAPRXXXXXXXXXX-XXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE 250
+ + L P N++ +++ E F ++EL L+
Sbjct: 679 SFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLK 738
Query: 251 NINPMMYSILAD--LIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
+ ++ A L+ +DL YN N I +F +
Sbjct: 739 TLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNL 798
Query: 309 FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+ L L NRL ++ AFT L NL LD+ +N+L L + SF + N+ L++
Sbjct: 799 EFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRL--- 855
Query: 369 NIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKG--LFKMNPHLQFLNLSGNNLQDIHNLL 426
N+ D+++ + K + L+FLNL+ N L + +
Sbjct: 856 NVSHNHIASFYDELSSYMYIYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHA 915
Query: 427 YQSNIKLTHLDLSRNKFKGFDEKSY 451
+ L L+++ N +S+
Sbjct: 916 FGDLEFLEILNVAHNNLTSLRRRSF 940
Score = 155 (59.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 53/203 (26%), Positives = 92/203 (45%)
Query: 146 LNLTHNNITSLLDYNFKGMMN-LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L+++HN++T D +F + N L+ L L N++ S+ S F L L +L++AHN ++ L
Sbjct: 878 LDISHNHVTKS-D-SFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSL 935
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
R +N + ++ E F ++++L+ + S L + P + L
Sbjct: 936 RRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRAL-PREVFMNTRLE 994
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSF--SSQFKLQVLCLKRNRLA 322
+LD+ NQ ++ L+ S +SQF L + L RNR+
Sbjct: 995 FLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQF-LYDISLARNRIT 1053
Query: 323 KVTTTAFTNLTNLIELDISYNKL 345
+ F+ L NL LD+S N L
Sbjct: 1054 ILPDNTFSFLNNLTNLDLSQNPL 1076
Score = 151 (58.2 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 77/327 (23%), Positives = 137/327 (41%)
Query: 137 FWGVPSLRYLNLTHNNITSLL--DYNFKGM-MNLQELYLDFNKIESIPSSVFM-HLSD-- 190
F +P LR ++L N I S+ + + + M+L+ L L N IE++ S F + SD
Sbjct: 419 FEQLPELRIVSLRDNLIRSVQWKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDVH 478
Query: 191 LRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE-LKTFKCRSCGL 249
LR L+L N +++L P +N I ++P F+ + E L+ L
Sbjct: 479 LRALNLEQNFVTQL-PEAVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRL 537
Query: 250 ENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQF 309
+ P+ S L L YL L NQ GN+F +I +
Sbjct: 538 TTV-PVALSSLHHLKYLYLTSNQISQLNNLPSFTENLRVLSLS-GNNFSMIPVLGLKNYT 595
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLT---NLIELDISYNKLDRLEVASFDPIENSLRDLKIS 366
+L L + N + + F + NL + + NK+ L + SF +E ++++ +S
Sbjct: 596 QLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQ-IQEISLS 654
Query: 367 GNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIP-KGLFKMNP--------HLQFLNLSGN 417
N+I I ++++ P + L ++P L +L L N
Sbjct: 655 FNDI---TIHHPLVFENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQLIWLGLDNN 711
Query: 418 NLQDIHNLLYQSNIKLTHLDLSRNKFK 444
NL+ + N + +L++++LS N+ K
Sbjct: 712 NLKQVSNESFAQMRELSYINLSFNQLK 738
Score = 134 (52.2 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 73/340 (21%), Positives = 132/340 (38%)
Query: 118 HLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNIT---SLLDYNFKGMMNLQEL-YLD 173
+L+ + + N+ I + F G+ ++ ++L+ N+IT L+ N + + EL +
Sbjct: 623 NLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAV 682
Query: 174 F--NKIESI-PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
F +ES+ P + LS L L L +N + +++ +N + +
Sbjct: 683 FPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPR 742
Query: 231 EIFK-DIQE-LKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXX 288
+F+ D L GLE + + L DL L+L N+
Sbjct: 743 GLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLR 802
Query: 289 XXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAF---TNLTNLIELDISYNKL 345
N I +F+ L L L N+L ++ +F +N T + L++S+N
Sbjct: 803 YLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHN-- 860
Query: 346 DRLEVASF-DPIENSLR--DLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGL 402
+ASF D + + + L IS N++ +A +
Sbjct: 861 ---HIASFYDELSSYMYIYQLDISHNHV--TKSDSFTNLANTLRFLNLAHNQLGSLQSHA 915
Query: 403 FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
F L+ LN++ NNL + +Q L LDLS N+
Sbjct: 916 FGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQ 955
Score = 47 (21.6 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 11 LKSLDLSYNDIVEINP 26
L+SL LS NDI E+ P
Sbjct: 308 LRSLHLSDNDITEVAP 323
Score = 39 (18.8 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 14 LDLSYNDIVEINPEIFKDIQDT 35
L L++N I ++P F+ + +T
Sbjct: 505 LVLAFNAISRVHPSAFEGLTET 526
Score = 39 (18.8 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 9 SKLKSLDLSYNDIVEINPEIF 29
++L L++ YN I +I IF
Sbjct: 595 TQLSYLNMGYNSITDIPEGIF 615
>ZFIN|ZDB-GENE-080327-14 [details] [associations]
symbol:lrrtm4l2 "leucine rich repeat transmembrane
neuronal 4 like 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-14 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042802
InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG052362 EMBL:CU468765
IPI:IPI00876678 UniGene:Dr.110767 IntAct:A8BB35 STRING:A8BB35
Uniprot:A8BB35
Length = 445
Score = 192 (72.6 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 61/225 (27%), Positives = 95/225 (42%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L +N++ LL Y F + L LYLD N I ++ F L L+ L L+ N+I++L
Sbjct: 62 LSLRYNSLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQ 121
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN + ++ P F +++L+ RS + +I + L +
Sbjct: 122 NGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEF 181
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LDLGYN+ N F I F LQ L L+ NR+ V
Sbjct: 182 LDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLLNLQALYLQWNRIRTVV 241
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
+ L +LD+S N++ L+ A F + N L L + N I
Sbjct: 242 QGSPWTWHTLQKLDLSGNEIQILDPAIFRCLPN-LHTLNLESNKI 285
Score = 160 (61.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 58/213 (27%), Positives = 92/213 (43%)
Query: 47 LLHSSASVMCPYMCECALDDRGRYEIVCRRG---DMANPIPIGQMDLG---TEVLKIVP- 99
LL S MCP C C G+ + C G D+ I +G L +L ++P
Sbjct: 21 LLLSKGERMCPVSCRC----EGKI-VYCESGGFQDVPENISLGCQGLSLRYNSLLLLLPY 75
Query: 100 --SEENP------NHLTIGPI----FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLN 147
+ N +H +I + FQ + L+EL ++++ I + F VP+LR L+
Sbjct: 76 QFAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLD 135
Query: 148 LTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPR 207
L++N + L+ +F G+ LQ L+L N I SIP FM L L L +NR+ +
Sbjct: 136 LSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRT 195
Query: 208 XXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
+N IN +F + L+
Sbjct: 196 TFLGLLRLTELHLEHNQFSRINFFLFPRLLNLQ 228
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 60/260 (23%), Positives = 110/260 (42%)
Query: 12 KSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYE 71
+ L L YN ++ + P F + ++LYL H+S S + + L R E
Sbjct: 60 QGLSLRYNSLLLLLPYQFAHLNQL-------VWLYLDHNSISTVDRLAFQ-GL--RRLKE 109
Query: 72 IVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPA 131
++ +A + G + + + S L G F + L+ LH+ ++ I +
Sbjct: 110 LILSSNKIAQ-LQNGTFETVPNLRNLDLSYNQMQDLVPGH-FHGLRKLQNLHLRSNNIRS 167
Query: 132 IGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDL 191
I F SL +L+L +N + ++ F G++ L EL+L+ N+ I +F L +L
Sbjct: 168 IPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLLNL 227
Query: 192 RVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLEN 251
+ L L NRI + N+I ++P IF+ + L T S + N
Sbjct: 228 QALYLQWNRIRTVVQGSPWTWHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNKISN 287
Query: 252 INPMMYSILADLIYLDLGYN 271
++ + S + ++L N
Sbjct: 288 VSLEVVSSWISISTINLAGN 307
Score = 145 (56.1 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 56/272 (20%), Positives = 104/272 (38%)
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN 229
+Y + + +P ++ + L SL +N + L P +N I ++
Sbjct: 41 VYCESGGFQDVPENISLGCQGL---SLRYNSLLLLLPYQFAHLNQLVWLYLDHNSISTVD 97
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
F+ ++ LK S + + + + +L LDL YNQ
Sbjct: 98 RLAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQN 157
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
N+ I ++F L+ L L NRL +T T F L L EL + +N+ R+
Sbjct: 158 LHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRIN 217
Query: 350 VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
F + N L+ L + N I+ ++ + +F+ P+L
Sbjct: 218 FFLFPRLLN-LQALYLQWNRIRTVVQGSPWTWHTLQKLD-LSGNEIQILDPAIFRCLPNL 275
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
LNL N + ++ + S I ++ ++L+ N
Sbjct: 276 HTLNLESNKISNVSLEVVSSWISISTINLAGN 307
Score = 143 (55.4 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 61/245 (24%), Positives = 100/245 (40%)
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
NS + + + F + L +L L HN+I+++ F+G+ L+EL L NKI + + F
Sbjct: 67 NSLLLLLPYQ-FAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTF 125
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCR 245
+ +LR L L++N++ L P N+I I F + + L+
Sbjct: 126 ETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLG 185
Query: 246 SCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSF 305
L I + L L L L +NQ N +++ S
Sbjct: 186 YNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLLNLQALYLQWNRIRTVVQGSP 245
Query: 306 SSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDR--LEVASFDPIENSLRDL 363
+ LQ L L N + + F L NL L++ NK+ LEV S I S+ +
Sbjct: 246 WTWHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNKISNVSLEVVS-SWI--SISTI 302
Query: 364 KISGN 368
++GN
Sbjct: 303 NLAGN 307
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/149 (28%), Positives = 67/149 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N ++L F+ +L L L N ++ V AF L L EL +S NK+ +L+ +F+
Sbjct: 67 NSLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFE 126
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ N LR+L +S N +Q + N IP F L+FL+L
Sbjct: 127 TVPN-LRNLDLSYNQMQDLVPGHFHGLRKLQNLH-LRSNNIRSIPVRTFMECRSLEFLDL 184
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443
N L+ I + ++LT L L N+F
Sbjct: 185 GYNRLRTITRTTFLGLLRLTELHLEHNQF 213
Score = 108 (43.1 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 46/207 (22%), Positives = 77/207 (37%)
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND 224
+ Q L L +N + + F HL+ L L L HN IS + N
Sbjct: 57 LGCQGLSLRYNSLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNK 116
Query: 225 IVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXX 284
I ++ F+ + L+ ++++ P + L L L L N
Sbjct: 117 IAQLQNGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMEC 176
Query: 285 XXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
N I +F +L L L+ N+ +++ F L NL L + +N+
Sbjct: 177 RSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLLNLQALYLQWNR 236
Query: 345 LDRLEVASFDPIENSLRDLKISGNNIQ 371
+ R V ++L+ L +SGN IQ
Sbjct: 237 I-RTVVQGSPWTWHTLQKLDLSGNEIQ 262
Score = 51 (23.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 409 LQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
LQ L+LSGN +Q + +++ L L+L NK
Sbjct: 251 LQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNK 284
>UNIPROTKB|Q86VH4 [details] [associations]
symbol:LRRTM4 "Leucine-rich repeat transmembrane neuronal
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182030 EMBL:AY358324 EMBL:BC099738
EMBL:BC110058 IPI:IPI00465323 IPI:IPI00884323 RefSeq:NP_001128217.1
RefSeq:NP_079269.4 UniGene:Hs.285782 ProteinModelPortal:Q86VH4
SMR:Q86VH4 STRING:Q86VH4 PhosphoSite:Q86VH4 DMDM:166897996
PaxDb:Q86VH4 PRIDE:Q86VH4 Ensembl:ENST00000409088
Ensembl:ENST00000409093 Ensembl:ENST00000409884 GeneID:80059
KEGG:hsa:80059 UCSC:uc002snq.3 UCSC:uc002sns.2 CTD:80059
GeneCards:GC02M076974 HGNC:HGNC:19411 MIM:610870 neXtProt:NX_Q86VH4
PharmGKB:PA134972631 ChiTaRS:LRRTM4 GenomeRNAi:80059 NextBio:70258
ArrayExpress:Q86VH4 Bgee:Q86VH4 CleanEx:HS_LRRTM4
Genevestigator:Q86VH4 Uniprot:Q86VH4
Length = 590
Score = 194 (73.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 58/225 (25%), Positives = 96/225 (42%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L N+I L F G+ L LYLD N I S+ F + L+ L L+ N+I+ L
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
+ YN + + E FK +++L RS L+ + ++ +L +
Sbjct: 126 NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDF 185
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LDLGYN+ N F I F F L+ + L+ NR+ ++
Sbjct: 186 LDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSIS 245
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
++L LD+S N + +E +F + N L+ L + N +
Sbjct: 246 QGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPN-LQKLNLDSNKL 289
Score = 164 (62.8 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 63/275 (22%), Positives = 104/275 (37%)
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN 229
+Y + + IP ++ + LSL N I KL +N I ++
Sbjct: 45 VYCESHAFADIPENIS---GGSQGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVD 101
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
+ F+ I+ LK S + ++ + + +L LDL YN+
Sbjct: 102 EDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLII 161
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
N + + F L L L NRL ++ AF L L EL + +N+ ++
Sbjct: 162 LHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKIN 221
Query: 350 VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
A F + N LR + + N I+ ++ + I G FK P+L
Sbjct: 222 FAHFPRLFN-LRSIYLQWNRIRSISQGLTWTWSSLHNLD-LSGNDIQGIEPGTFKCLPNL 279
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
Q LNL N L +I + I L + LS N ++
Sbjct: 280 QKLNLDSNKLTNISQETVNAWISLISITLSGNMWE 314
Score = 155 (59.6 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 69/302 (22%), Positives = 113/302 (37%)
Query: 42 TIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSE 101
T+ L +L + A CP C C D + Y D+ I G L I +
Sbjct: 21 TLLLVML-TGAQRACPKNCRC--DGKIVYCESHAFADIPENISGGSQGLSLRFNSIQKLK 77
Query: 102 ENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF 161
N F L L++ +++I ++ F G+ L+ L L+ N IT L + F
Sbjct: 78 SNQ--------FAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTF 129
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
+ NL+ L L +NK++++ S F L L +L L N + + R
Sbjct: 130 HPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLG 189
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
YN + ++ F + +LK IN + L +L + L +N+
Sbjct: 190 YNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLT 249
Query: 282 XXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
GN I +F LQ L L N+L ++ +LI + +S
Sbjct: 250 WTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISLISITLS 309
Query: 342 YN 343
N
Sbjct: 310 GN 311
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 145 (56.1 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 49/156 (31%), Positives = 75/156 (48%)
Query: 51 SASVM-CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S SV+ CP C C+ + IV RG IP + TE+ ++ E+N +
Sbjct: 185 SCSVLHCPIACTCSNN------IVDCRGKGLTEIPTNLPETITEI-RL---EQNSIRVIP 234
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F ++ L L ++N+ I + F G+ SL L L N IT L F+G+ +LQ
Sbjct: 235 PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQL 294
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L+ NKI + F L +L +LSL N++ +A
Sbjct: 295 LLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVA 330
Score = 132 (51.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 117 QHLEELHITNS---FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ EL + N+ + A G F +P LR +NL++N IT + + F+G + E+ L
Sbjct: 443 QYTAELRLNNNEFTVLEATGI--FKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLT 500
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E++ +F L L+ L L NRIS + N I + P F
Sbjct: 501 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAF 560
Query: 234 KDIQELKT 241
+ L T
Sbjct: 561 GTLHSLST 568
Score = 130 (50.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 44/155 (28%), Positives = 75/155 (48%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A + CP C C G + C + N IP + T L++ +E T G
Sbjct: 412 ADLACPEKCRC----EGT-TVDCSNQKL-NKIP-DHIPQYTAELRLNNNEFTVLEAT-G- 462
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF++ L +++++N+ I I F G + + LT N + ++ FKG+ +L+ L
Sbjct: 463 IFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 522
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L N+I + + F L +R+LSL N+I+ +AP
Sbjct: 523 LRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAP 557
Score = 129 (50.5 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
FQ + LE L + + + F G L L+L+ N I ++ F+G ++++ L L
Sbjct: 13 FQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQL 72
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
D+N+I I F L DL VL+L +N I++L+
Sbjct: 73 DYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 105
Score = 106 (42.4 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 30/113 (26%), Positives = 48/113 (42%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F + L L L NN+ + F G L L L N+I++IP F D++ L L
Sbjct: 13 FQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQL 72
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGL 249
+N+IS + N+I ++ F + +L+TF+ S L
Sbjct: 73 DYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 125
Score = 100 (40.3 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N+L + P +F L L ++ + I AI F G ++ L L +N I+ + D
Sbjct: 25 NRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA 84
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + +L+ L L+ N I + + F H+ LR L N +
Sbjct: 85 FRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 125
Score = 87 (35.7 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 28/102 (27%), Positives = 43/102 (42%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
+ E+ L+ N I IP F LR L L++N+IS+LAP N I
Sbjct: 220 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 279
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
E+ +F+ + L+ + IN + DL L+L
Sbjct: 280 ELPKSLFEGLFSLQLLLLNA---NKINCLRVDAFQDLHNLNL 318
Score = 86 (35.3 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 29/117 (24%), Positives = 47/117 (40%)
Query: 252 INPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKL 311
I P +S L LDL NQ GN + + F F L
Sbjct: 233 IPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSL 292
Query: 312 QVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
Q+L L N++ + AF +L NL L + NKL + +F + +++ + ++ N
Sbjct: 293 QLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALR-AIQTMHLAQN 348
Score = 80 (33.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/152 (23%), Positives = 61/152 (40%)
Query: 330 TNLTNLI-ELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
TNL I E+ + N + + +F P + LR L +S N I
Sbjct: 214 TNLPETITEIRLEQNSIRVIPPGAFSPYKK-LRRLDLSNNQISELAPDAFQGLRSLNSLV 272
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
+ T++PK LF+ LQ L L+ N + + +Q L L L NK + +
Sbjct: 273 LYGN-KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAK 331
Query: 449 KSY-IMSEPKNIHKAAKNSFALQSSMGKNAEY 479
++ + + +H A+N F + A+Y
Sbjct: 332 GTFSALRAIQTMH-LAQNPFICDCHLKWLADY 362
Score = 77 (32.2 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N VI +FS KL+ L L N+++++ AF L +L L + NK+ L + F+
Sbjct: 228 NSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFE 287
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ SL+ L ++ N I + D + KG F +Q ++L
Sbjct: 288 GLF-SLQLLLLNANKINCLRVDAFQDLHNLNLLS-LYDNKLQTVAKGTFSALRAIQTMHL 345
Query: 415 SGNN-LQDIH 423
+ N + D H
Sbjct: 346 AQNPFICDCH 355
Score = 75 (31.5 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 21/113 (18%), Positives = 49/113 (43%)
Query: 151 NNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXX 210
N I+++ F+ + L+ L L+ N ++ P +F+ + L L L+ N+I + +
Sbjct: 3 NKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFR 62
Query: 211 XXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
YN I I F+ +++L+ + + ++ ++ + L
Sbjct: 63 GAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKL 115
Score = 73 (30.8 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 30/125 (24%), Positives = 51/125 (40%)
Query: 295 NHFPVILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N F V LE + F +L+ + L N++ + AF + + E+ ++ N+L+ ++
Sbjct: 453 NEFTV-LEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKM 511
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
F +E SL+ L + N I + D T + G F L L
Sbjct: 512 FKGLE-SLKTLMLRSNRISCVGNDSFTGLGSVRLLS-LYDNQITTVAPGAFGTLHSLSTL 569
Query: 413 NLSGN 417
NL N
Sbjct: 570 NLLAN 574
Score = 70 (29.7 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQ-----SNIKLT--HLDLSRNK-FKGFDEKSYI 452
G+FK P L+ +NLS N + DI ++ + I LT L+ ++K FKG + +
Sbjct: 462 GIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 521
Query: 453 MSEPKNIHKAAKNSF 467
M I +SF
Sbjct: 522 MLRSNRISCVGNDSF 536
Score = 64 (27.6 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 28/128 (21%), Positives = 51/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N + + AF+ L LD+S N++ L +F + SL L + GN I
Sbjct: 225 LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLR-SLNSLVLYGNKITELPK 283
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + F+ +L L+L N LQ + + + +
Sbjct: 284 SLFEGLFSLQLLLLNAN-KINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQT 342
Query: 436 LDLSRNKF 443
+ L++N F
Sbjct: 343 MHLAQNPF 350
Score = 60 (26.2 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 24/88 (27%), Positives = 35/88 (39%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
LGT L + EN F+ ++ L + + I I F + L L L
Sbjct: 38 LGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLN 97
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKI 177
+NNIT L +F M L+ L N +
Sbjct: 98 NNNITRLSVASFNHMPKLRTFRLHSNNL 125
Score = 58 (25.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KL+ LDLS N I E+ P+ F+ ++ L
Sbjct: 243 KLRRLDLSNNQISELAPDAFQGLRSLNSL 271
Score = 45 (20.9 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
+K+L L YN I I F+ ++D +L
Sbjct: 67 IKNLQLDYNQISCIEDGAFRALRDLEVL 94
Score = 43 (20.2 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 5 LIFM--SKLKSLDLSYNDIVEINPEIFKDIQD 34
L+F+ +KL LDLS N I I + F+ D
Sbjct: 35 LLFLGTAKLYRLDLSENQIQAIPRKAFRGAVD 66
Score = 43 (20.2 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 23/121 (19%), Positives = 40/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I P F ++L+ + + + P + L L L L N+
Sbjct: 228 NSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFE 287
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L V F+ L + + ++
Sbjct: 288 GLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLAQ 347
Query: 343 N 343
N
Sbjct: 348 N 348
>FB|FBgn0010452 [details] [associations]
symbol:trn "tartan" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=TAS] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
InterPro:IPR000372 SMART:SM00013 GO:GO:0007476 GO:GO:0035147
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 FlyBase:FBgn0010452
CTD:38721 EMBL:AY051439 RefSeq:NP_524055.2 UniGene:Dm.2255
SMR:Q9VU51 MINT:MINT-1567723 STRING:Q9VU51
EnsemblMetazoa:FBtr0075890 GeneID:39491 KEGG:dme:Dmel_CG11280
UCSC:CG11280-RA InParanoid:Q9VU51 OMA:RTFAYQK GenomeRNAi:39491
NextBio:813916 Uniprot:Q9VU51
Length = 737
Score = 195 (73.7 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 70/250 (28%), Positives = 111/250 (44%)
Query: 105 NHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NHL P F + L+E+H+ ++ I I F G+ ++ LNL N I+ L F
Sbjct: 92 NHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFT 151
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA-PRXXXXXXXXXXXXXX 221
++ ++EL L N+I + F LS LR+L L N ++ + P
Sbjct: 152 PLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLG 211
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
N + I + F+D++ L + + L NI+ + L +L LDL N+
Sbjct: 212 MNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGL 271
Query: 282 XXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRN-RLAKVTTTAFTNLTNLIELDI 340
N F VI E +F +L+ L + RL +V T AF++ NL L++
Sbjct: 272 SKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNL 331
Query: 341 SYNKLDRLEV 350
S NK+ LEV
Sbjct: 332 SSNKM-LLEV 340
Score = 174 (66.3 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 65/301 (21%), Positives = 122/301 (40%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
L +L+L+ N++ ++ F LQE++L+ NKI I + F+ LS + VL+L N+IS
Sbjct: 84 LTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQIS 143
Query: 203 KLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI-NPMMYSILA 261
+L N I ++P+ F + +L+ L + +P+++ +
Sbjct: 144 ELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMP 203
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
L L LG N G I SF +L++L L NRL
Sbjct: 204 SLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRL 263
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN-NIQXXXXXXXXX 380
++ + + L L +L + N + + +F ++ L+ L+++G ++
Sbjct: 264 DRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQ-LKRLEVNGALRLKRVMTGAFSD 322
Query: 381 XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSR 440
++ ++ +G L+ + L N L + L+ L LDLS
Sbjct: 323 NGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLFPWK-DLQTLDLSE 381
Query: 441 N 441
N
Sbjct: 382 N 382
Score = 149 (57.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 65/310 (20%), Positives = 113/310 (36%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNR 200
PS++ L + N I ++ D + + L L L N + +IP F + L+ + L HN+
Sbjct: 59 PSIQRLVIKSNKIKTI-DSSIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNK 117
Query: 201 ISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSIL 260
I +++ + N I E++ F + +++ + ++P + L
Sbjct: 118 IGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGL 177
Query: 261 ADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG-NHFPVILEKSFSSQFKLQVLCLKRN 319
+ L L L N G N I +F L L LK
Sbjct: 178 SQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGA 237
Query: 320 RLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXX 379
L ++ +F L L LD+S N+LDR+ + L L + N+ +
Sbjct: 238 SLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVR-LEQLSLGQNDFEVISEGAFM 296
Query: 380 XXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNN-LQDIHNLLYQSNIKLTHLDL 438
+ + G F N +L++LNLS N L ++ +L H+ L
Sbjct: 297 GLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVL 356
Query: 439 SRNKFKGFDE 448
N E
Sbjct: 357 KANALTSLAE 366
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 196 (74.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 101/399 (25%), Positives = 159/399 (39%)
Query: 51 SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIG 110
+A +C C C D R + C G +P G + T+ L I + N++T
Sbjct: 24 AAPPLCAAPCSCDGDRR----VDCS-GKGLTAVPEG-LSAFTQALDI-----SMNNITQL 72
Query: 111 P--IFQQFQHLEELHITNSFIPAIGFHP--FWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
P F+ F LEEL + + + I HP G+ L+ L L +N + ++ +G+
Sbjct: 73 PEDAFKNFPFLEELQLAGNDLSFI--HPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSA 130
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
LQ L LD N I S+P F L LR L L N ++++ R N+I
Sbjct: 131 LQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNIS 190
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
I F ++ L + +++++ + L +L LDL YN
Sbjct: 191 SIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLDEFPQAIKALPSL 250
Query: 287 XXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
N VI + +F+ L+ + L N L+ V +AF NL++L L I L
Sbjct: 251 KELGFHS-NSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASL- 308
Query: 347 RLEVASFDPIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK 404
V F + + L L ++G I D++Y DI + L
Sbjct: 309 ---VQWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTL----DLSYNDI-RDLPS 360
Query: 405 MNP--HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
N L+ ++L N + I +Q L LDLSRN
Sbjct: 361 FNGCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRN 399
Score = 165 (63.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 65/258 (25%), Positives = 102/258 (39%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F L LH+ N+ I ++ H F G+ +L L+L +NN+ K + +L+EL
Sbjct: 197 FTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLDEF-PQAIKALPSLKELGF 255
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N I IP F LR + L N +S + +V+ P +
Sbjct: 256 HSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFPNL 315
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
+ L++ + +I + L LDL YN
Sbjct: 316 AGTVH-LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPSFNGCRALEEISLQR 374
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N +I E +F L++L L RN + ++ + AF L + LD+S+N E+ S
Sbjct: 375 --NQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFN-----ELTS 427
Query: 353 FDPIE--NSLRDLKISGN 368
F P E N L LK+ GN
Sbjct: 428 F-PTEGLNGLNQLKLVGN 444
Score = 153 (58.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 73/334 (21%), Positives = 132/334 (39%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
+ L+ L + N+ + + G+ +L+ L L N+ITS+ + +F+G++ L+ L+LD N
Sbjct: 105 KELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNI 164
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ +P +L L+ L+LA N IS + N I ++ F +
Sbjct: 165 LTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGL 224
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L+T L+ P L L L N N
Sbjct: 225 DNLETLDLNYNNLDEF-PQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNP 283
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF--D 354
+ +F + L L ++ L + F NL + L+ S L +++S D
Sbjct: 284 LSFVGNSAFHNLSDLHSLVIRGASLVQW----FPNLAGTVHLE-SLT-LTGTKISSIPDD 337
Query: 355 PIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
+N LR L +S N+I+ + + I + F+ L+ L
Sbjct: 338 LCQNQKMLRTLDLSYNDIRDLPSFNGCRALEEIS---LQRNQISLIKETTFQGLTSLRIL 394
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
+LS N +++IH+ + +T+LD+S N+ F
Sbjct: 395 DLSRNLIREIHSGAFAKLGTITNLDVSFNELTSF 428
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 81/382 (21%), Positives = 150/382 (39%)
Query: 12 KSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYE 71
++LD+S N+I ++ + FK+ F L L + S + P AL +
Sbjct: 60 QALDISMNNITQLPEDAFKN-------FPFLEELQLAGNDLSFIHPK----ALSGLKELK 108
Query: 72 IVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQHLEELHITNSFI 129
++ + + +P + G L+ + + N H+T P F+ L L + ++ +
Sbjct: 109 VLTLQNNQLKTVP-SEAIRGLSALQSLRLDAN--HITSVPEDSFEGLVQLRHLWLDDNIL 165
Query: 130 PAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLS 189
+ P +P+L+ L L NNI+S+ D+ F + +L L+L NKI+S+ F L
Sbjct: 166 TEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLD 225
Query: 190 DLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGL 249
+L L L +N + + P+ N I I F L+T L
Sbjct: 226 NLETLDLNYNNLDEF-PQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPL 284
Query: 250 ENINPMMYSILADLIYL------------DLGYNQXXXXXXXXXXXXXXXXXXXXXGNHF 297
+ + L+DL L +L
Sbjct: 285 SFVGNSAFHNLSDLHSLVIRGASLVQWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKM 344
Query: 298 PVILEKSFSS-----QFK----LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
L+ S++ F L+ + L+RN+++ + T F LT+L LD+S N + +
Sbjct: 345 LRTLDLSYNDIRDLPSFNGCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREI 404
Query: 349 EVASFDPIENSLRDLKISGNNI 370
+F + ++ +L +S N +
Sbjct: 405 HSGAFAKL-GTITNLDVSFNEL 425
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 141 (54.7 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 47/172 (27%), Positives = 75/172 (43%)
Query: 47 LLHSSASVMCPYMCECA---LDDRGRYEIVCRRG----------DMANPIPIGQMDL-GT 92
+L + CP C C+ +D G RG D N I +MD G
Sbjct: 25 ILSGPPAAACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFTGL 84
Query: 93 EVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN 152
+ L+++ E+N + FQ + LE L + + + + F P L L+L+ N
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQ 144
Query: 153 ITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
I + F+G+ ++ L LD N I I F L DL +L+L +N IS++
Sbjct: 145 IQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRI 196
Score = 135 (52.6 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 45/153 (29%), Positives = 75/153 (49%)
Query: 53 SVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPI 112
S+ CP C C+ + IV RG IP +L +++I + + + G
Sbjct: 277 SLSCPSACSCSNN------IVDCRGKGLTEIPA---NLPEGIVEIRLEQNSIKSIPAGA- 326
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F Q++ L+ + I+ + I I F G+ SL L L N IT + F G+++LQ L L
Sbjct: 327 FIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLL 386
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ NKI + + F L +L +LSL N++ ++
Sbjct: 387 NANKINCLRVNTFQDLQNLNLLSLYDNKLQTIS 419
Score = 128 (50.1 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 40/153 (26%), Positives = 77/153 (50%)
Query: 54 VMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIF 113
++CP C C G + C ++ IP + T+ L++ ++ + L IF
Sbjct: 503 LVCPEKCRC----EGTI-VDCSNQKLSR-IPSHLPEYTTD-LRL--NDNDIAVLEATGIF 553
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
++ +L +++++N+ I + F G ++ L LT N + ++ F+G+ L+ L L
Sbjct: 554 KKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLR 613
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N I + + F LS +R+LSL NRI+ ++P
Sbjct: 614 SNLISCVNNDTFAGLSSVRLLSLYDNRITTISP 646
Score = 117 (46.2 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 41/143 (28%), Positives = 63/143 (44%)
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P+HL P + L + I + + A G F +P+LR +NL++N I + + F G
Sbjct: 527 PSHL---PEYTTDLRLNDNDI--AVLEATGI--FKKLPNLRKINLSNNRIKEVREGAFDG 579
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
+QEL L N++E++ +F LS L+ L L N IS + N
Sbjct: 580 AAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDN 639
Query: 224 DIVEINPEIFKDIQELKTFKCRS 246
I I+P F + L T S
Sbjct: 640 RITTISPGAFTTLVSLSTINLLS 662
Score = 114 (45.2 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 35/134 (26%), Positives = 56/134 (41%)
Query: 139 GVP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
G+P + L+L NNIT + +F G+ NL+ L+L+ N++ I F L L L L
Sbjct: 58 GIPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLN 117
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
N++ L N I I + F+ + +K + + + I +
Sbjct: 118 KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAF 177
Query: 258 SILADLIYLDLGYN 271
L DL L L N
Sbjct: 178 RALRDLEILTLNNN 191
Score = 111 (44.1 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L + P +FQ L L ++ + I I F GV ++ L L +N+I+ + D
Sbjct: 117 NKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGA 176
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + +L+ L L+ N I I + F H+ +R L L N +
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 107 (42.7 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + K S+ +L ++ L N ++ +T F+N+++L L +SYN+L + V +F
Sbjct: 761 GNHLTAV-PKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAF 819
Query: 354 DPIENSLRDLKISGNNI 370
+ + SLR L + GN+I
Sbjct: 820 NGLR-SLRVLTLHGNDI 835
Score = 101 (40.6 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
E+ + + I +I F L+ ++++ N I+ + F+G+ +L L L NKI I
Sbjct: 311 EIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
P +F L L++L L N+I+ L N + I+ +F +Q ++
Sbjct: 371 PKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQ 430
Query: 241 T 241
T
Sbjct: 431 T 431
Score = 97 (39.2 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 30/136 (22%), Positives = 59/136 (43%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ E L + + I I F G+ +LR L+L N ++ + F+ + L+ L L+ NK
Sbjct: 61 RNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNK 120
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ +P +F L L L+ N+I + + N I I F+ +
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 237 QELKTFKCRSCGLENI 252
++L+ + + I
Sbjct: 181 RDLEILTLNNNNISRI 196
Score = 87 (35.7 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 169 ELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI 228
E+ L+ N I+SIP+ F+ L+ + ++ N+IS +AP N I EI
Sbjct: 311 EIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
+F + L+ + IN + + DL L+L
Sbjct: 371 PKGLFDGLVSLQLLLLNA---NKINCLRVNTFQDLQNLNL 407
Score = 81 (33.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 25/103 (24%), Positives = 41/103 (39%)
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
+D+ NQ GN I + F LQ+L L N++ +
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLR 395
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
F +L NL L + NKL + F P++ S++ L ++ N
Sbjct: 396 VNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQ-SIQTLHLAQN 437
Score = 80 (33.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 32/146 (21%), Positives = 57/146 (39%)
Query: 335 LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMN 394
++E+ + N + + +F + L+ + IS N I +
Sbjct: 309 IVEIRLEQNSIKSIPAGAFIQYKK-LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGN-K 366
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI-M 453
T+IPKGLF LQ L L+ N + + +Q L L L NK + + + +
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 454 SEPKNIHKAAKNSFALQSSMGKNAEY 479
+ +H A+N F + A+Y
Sbjct: 427 QSIQTLH-LAQNPFVCDCHLKWLADY 451
Score = 76 (31.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/114 (24%), Positives = 49/114 (42%)
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
+F KL+ + + +N+++ + AF L +L L + NK+ + FD + SL+ L
Sbjct: 326 AFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLV-SLQLL 384
Query: 364 KISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
++ N I + D I KGLF +Q L+L+ N
Sbjct: 385 LLNANKINCLRVNTFQDLQNLNLLS-LYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 75 (31.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
++EL +T + + + F G+ L+ L L N I+ + + F G+ +++ L L N+I
Sbjct: 583 VQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRIT 642
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
+I F L L ++L N
Sbjct: 643 TISPGAFTTLVSLSTINLLSN 663
Score = 73 (30.8 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 24/105 (22%), Positives = 50/105 (47%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
+L L+ N I + ++ +F L +LR ++L++NRI ++ N +
Sbjct: 536 DLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLET 595
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F+ + LKT RS + +N ++ L+ + L L N+
Sbjct: 596 MHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNR 640
Score = 73 (30.8 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 26/124 (20%), Positives = 51/124 (41%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L L N+I L FK + NL+++ L N+I+ + F + ++ L L N++ +
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETM 596
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
R N I +N + F + ++ + I+P ++ L L
Sbjct: 597 HGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLS 656
Query: 265 YLDL 268
++L
Sbjct: 657 TINL 660
Score = 72 (30.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 28/126 (22%), Positives = 48/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N+I S+ F L+ + + N+I I F L L L L N+I+++
Sbjct: 312 IRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 371
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I + F+D+Q L L+ I+ +++ L +
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 266 LDLGYN 271
L L N
Sbjct: 432 LHLAQN 437
Score = 71 (30.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 30/128 (23%), Positives = 51/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N + + AF L +DIS N++ + +F ++ SL L + GN I
Sbjct: 314 LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLK-SLTSLVLYGNKITEIPK 372
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + F+ +L L+L N LQ I L+ +
Sbjct: 373 GLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 432 LHLAQNPF 439
Score = 68 (29.0 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N ++ +FS+ L L L NRL + AF L +L L + N + + SF+
Sbjct: 785 NSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 844
Query: 355 PIENSLRDLKISGN 368
+ SL L + N
Sbjct: 845 DL-TSLSHLALGIN 857
Score = 65 (27.9 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 25/131 (19%), Positives = 57/131 (43%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQX 372
L L N +A + T F L NL ++++S N++ + +FD +++L ++GN ++
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAG-VQELMLTGNQLET 595
Query: 373 XXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIK 432
+++ + + F ++ L+L N + I + + +
Sbjct: 596 MHGRMFRGLSGLKTLMLRSNL-ISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVS 654
Query: 433 LTHLDLSRNKF 443
L+ ++L N F
Sbjct: 655 LSTINLLSNPF 665
Score = 63 (27.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 22/92 (23%), Positives = 32/92 (34%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N N I +F+ L+V
Sbjct: 768 PKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRV 827
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V +F +LT+L L + N L
Sbjct: 828 LTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 61 (26.5 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KLK +D+S N I +I P+ F+ ++ T L
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 61 (26.5 bits), Expect = 5.9e-07, Sum P(4) = 5.9e-07
Identities = 24/122 (19%), Positives = 46/122 (37%)
Query: 223 NDIVEINPE-IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
NDI + IFK + L+ + ++ + + A + L L NQ
Sbjct: 542 NDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMF 601
Query: 282 XXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
N + +F+ +++L L NR+ ++ AFT L +L +++
Sbjct: 602 RGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLL 661
Query: 342 YN 343
N
Sbjct: 662 SN 663
Score = 61 (26.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 28/120 (23%), Positives = 46/120 (38%)
Query: 300 ILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+LE + F L+ + L NR+ +V AF + EL ++ N+L+ + F +
Sbjct: 546 VLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGL- 604
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
+ L+ L + N I + D T I G F L +NL N
Sbjct: 605 SGLKTLMLRSNLISCVNNDTFAGLSSVRLLS-LYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 60 (26.2 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
G+FK P+L+ +NLS N ++++ + + L L+ N+ +
Sbjct: 551 GIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLE 594
Score = 60 (26.2 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 24/104 (23%), Positives = 44/104 (42%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
+D S KL R + S P + DL+++ N+I +++ +
Sbjct: 516 VDCSNQKLSR--IPSHLPEYTT--DLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKE 571
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ +G F +Q L L+GN L+ +H +++ L L L N
Sbjct: 572 VREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSN 615
Score = 53 (23.7 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + F L+ L L+ N ++ V F L+++ L + N++ + +F
Sbjct: 590 GNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAF 649
Query: 354 DPIENSLRDLKISGN 368
+ SL + + N
Sbjct: 650 TTLV-SLSTINLLSN 663
Score = 45 (20.9 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L L GN++ + + L+HL L N
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGIN 857
Score = 44 (20.5 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 5 LIFMS--KLKSLDLSYNDIVEINPEIFKDI 32
L+F S KL LDLS N I I + F+ +
Sbjct: 127 LLFQSTPKLTRLDLSENQIQGIPRKAFRGV 156
Score = 44 (20.5 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 24/121 (19%), Positives = 40/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I F ++LK + +I P + L L L L N+
Sbjct: 317 NSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFD 376
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L ++ F L ++ L ++
Sbjct: 377 GLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQ 436
Query: 343 N 343
N
Sbjct: 437 N 437
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 141 (54.7 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 47/172 (27%), Positives = 75/172 (43%)
Query: 47 LLHSSASVMCPYMCECA---LDDRGRYEIVCRRG----------DMANPIPIGQMDL-GT 92
+L + CP C C+ +D G RG D N I +MD G
Sbjct: 25 ILSGPPAAACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFTGL 84
Query: 93 EVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN 152
+ L+++ E+N + FQ + LE L + + + + F P L L+L+ N
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQ 144
Query: 153 ITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
I + F+G+ ++ L LD N I I F L DL +L+L +N IS++
Sbjct: 145 IQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRI 196
Score = 135 (52.6 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 45/153 (29%), Positives = 75/153 (49%)
Query: 53 SVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPI 112
S+ CP C C+ + IV RG IP +L +++I + + + G
Sbjct: 277 SLSCPSACSCSNN------IVDCRGKGLTEIPA---NLPEGIVEIRLEQNSIKSIPAGA- 326
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F Q++ L+ + I+ + I I F G+ SL L L N IT + F G+++LQ L L
Sbjct: 327 FIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLL 386
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ NKI + + F L +L +LSL N++ ++
Sbjct: 387 NANKINCLRVNTFQDLQNLNLLSLYDNKLQTIS 419
Score = 128 (50.1 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 40/153 (26%), Positives = 77/153 (50%)
Query: 54 VMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIF 113
++CP C C G + C ++ IP + T+ L++ ++ + L IF
Sbjct: 503 LVCPEKCRC----EGTI-VDCSNQKLSR-IPSHLPEYTTD-LRL--NDNDIAVLEATGIF 553
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
++ +L +++++N+ I + F G ++ L LT N + ++ F+G+ L+ L L
Sbjct: 554 KKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLR 613
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N I + + F LS +R+LSL NRI+ ++P
Sbjct: 614 SNLISCVNNDTFAGLSSVRLLSLYDNRITTISP 646
Score = 117 (46.2 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 41/143 (28%), Positives = 63/143 (44%)
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P+HL P + L + I + + A G F +P+LR +NL++N I + + F G
Sbjct: 527 PSHL---PEYTTDLRLNDNDI--AVLEATGI--FKKLPNLRKINLSNNRIKEVREGAFDG 579
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
+QEL L N++E++ +F LS L+ L L N IS + N
Sbjct: 580 AAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDN 639
Query: 224 DIVEINPEIFKDIQELKTFKCRS 246
I I+P F + L T S
Sbjct: 640 RITTISPGAFTTLVSLSTINLLS 662
Score = 114 (45.2 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 35/134 (26%), Positives = 56/134 (41%)
Query: 139 GVP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
G+P + L+L NNIT + +F G+ NL+ L+L+ N++ I F L L L L
Sbjct: 58 GIPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLN 117
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
N++ L N I I + F+ + +K + + + I +
Sbjct: 118 KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAF 177
Query: 258 SILADLIYLDLGYN 271
L DL L L N
Sbjct: 178 RALRDLEILTLNNN 191
Score = 111 (44.1 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L + P +FQ L L ++ + I I F GV ++ L L +N+I+ + D
Sbjct: 117 NKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGA 176
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + +L+ L L+ N I I + F H+ +R L L N +
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 107 (42.7 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + K S+ +L ++ L N ++ +T F+N+++L L +SYN+L + V +F
Sbjct: 761 GNHLTAV-PKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAF 819
Query: 354 DPIENSLRDLKISGNNI 370
+ + SLR L + GN+I
Sbjct: 820 NGLR-SLRVLTLHGNDI 835
Score = 101 (40.6 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
E+ + + I +I F L+ ++++ N I+ + F+G+ +L L L NKI I
Sbjct: 311 EIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
P +F L L++L L N+I+ L N + I+ +F +Q ++
Sbjct: 371 PKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQ 430
Query: 241 T 241
T
Sbjct: 431 T 431
Score = 97 (39.2 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 30/136 (22%), Positives = 59/136 (43%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ E L + + I I F G+ +LR L+L N ++ + F+ + L+ L L+ NK
Sbjct: 61 RNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNK 120
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ +P +F L L L+ N+I + + N I I F+ +
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 237 QELKTFKCRSCGLENI 252
++L+ + + I
Sbjct: 181 RDLEILTLNNNNISRI 196
Score = 87 (35.7 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 169 ELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI 228
E+ L+ N I+SIP+ F+ L+ + ++ N+IS +AP N I EI
Sbjct: 311 EIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
+F + L+ + IN + + DL L+L
Sbjct: 371 PKGLFDGLVSLQLLLLNA---NKINCLRVNTFQDLQNLNL 407
Score = 81 (33.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 25/103 (24%), Positives = 41/103 (39%)
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
+D+ NQ GN I + F LQ+L L N++ +
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLR 395
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
F +L NL L + NKL + F P++ S++ L ++ N
Sbjct: 396 VNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQ-SIQTLHLAQN 437
Score = 80 (33.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 32/146 (21%), Positives = 57/146 (39%)
Query: 335 LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMN 394
++E+ + N + + +F + L+ + IS N I +
Sbjct: 309 IVEIRLEQNSIKSIPAGAFIQYKK-LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGN-K 366
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI-M 453
T+IPKGLF LQ L L+ N + + +Q L L L NK + + + +
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 454 SEPKNIHKAAKNSFALQSSMGKNAEY 479
+ +H A+N F + A+Y
Sbjct: 427 QSIQTLH-LAQNPFVCDCHLKWLADY 451
Score = 76 (31.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/114 (24%), Positives = 49/114 (42%)
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
+F KL+ + + +N+++ + AF L +L L + NK+ + FD + SL+ L
Sbjct: 326 AFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLV-SLQLL 384
Query: 364 KISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
++ N I + D I KGLF +Q L+L+ N
Sbjct: 385 LLNANKINCLRVNTFQDLQNLNLLS-LYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 75 (31.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
++EL +T + + + F G+ L+ L L N I+ + + F G+ +++ L L N+I
Sbjct: 583 VQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRIT 642
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
+I F L L ++L N
Sbjct: 643 TISPGAFTTLVSLSTINLLSN 663
Score = 73 (30.8 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 24/105 (22%), Positives = 50/105 (47%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
+L L+ N I + ++ +F L +LR ++L++NRI ++ N +
Sbjct: 536 DLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLET 595
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
++ +F+ + LKT RS + +N ++ L+ + L L N+
Sbjct: 596 MHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNR 640
Score = 73 (30.8 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 26/124 (20%), Positives = 51/124 (41%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L L N+I L FK + NL+++ L N+I+ + F + ++ L L N++ +
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETM 596
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
R N I +N + F + ++ + I+P ++ L L
Sbjct: 597 HGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLS 656
Query: 265 YLDL 268
++L
Sbjct: 657 TINL 660
Score = 72 (30.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 28/126 (22%), Positives = 48/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N+I S+ F L+ + + N+I I F L L L L N+I+++
Sbjct: 312 IRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 371
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I + F+D+Q L L+ I+ +++ L +
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 266 LDLGYN 271
L L N
Sbjct: 432 LHLAQN 437
Score = 71 (30.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 30/128 (23%), Positives = 51/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N + + AF L +DIS N++ + +F ++ SL L + GN I
Sbjct: 314 LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLK-SLTSLVLYGNKITEIPK 372
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + F+ +L L+L N LQ I L+ +
Sbjct: 373 GLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 432 LHLAQNPF 439
Score = 68 (29.0 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N ++ +FS+ L L L NRL + AF L +L L + N + + SF+
Sbjct: 785 NSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 844
Query: 355 PIENSLRDLKISGN 368
+ SL L + N
Sbjct: 845 DL-TSLSHLALGIN 857
Score = 65 (27.9 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 25/131 (19%), Positives = 57/131 (43%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQX 372
L L N +A + T F L NL ++++S N++ + +FD +++L ++GN ++
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAG-VQELMLTGNQLET 595
Query: 373 XXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIK 432
+++ + + F ++ L+L N + I + + +
Sbjct: 596 MHGRMFRGLSGLKTLMLRSNL-ISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVS 654
Query: 433 LTHLDLSRNKF 443
L+ ++L N F
Sbjct: 655 LSTINLLSNPF 665
Score = 63 (27.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 22/92 (23%), Positives = 32/92 (34%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N N I +F+ L+V
Sbjct: 768 PKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRV 827
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V +F +LT+L L + N L
Sbjct: 828 LTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 61 (26.5 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KLK +D+S N I +I P+ F+ ++ T L
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 61 (26.5 bits), Expect = 5.9e-07, Sum P(4) = 5.9e-07
Identities = 24/122 (19%), Positives = 46/122 (37%)
Query: 223 NDIVEINPE-IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
NDI + IFK + L+ + ++ + + A + L L NQ
Sbjct: 542 NDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMF 601
Query: 282 XXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
N + +F+ +++L L NR+ ++ AFT L +L +++
Sbjct: 602 RGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLL 661
Query: 342 YN 343
N
Sbjct: 662 SN 663
Score = 61 (26.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 28/120 (23%), Positives = 46/120 (38%)
Query: 300 ILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+LE + F L+ + L NR+ +V AF + EL ++ N+L+ + F +
Sbjct: 546 VLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGL- 604
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
+ L+ L + N I + D T I G F L +NL N
Sbjct: 605 SGLKTLMLRSNLISCVNNDTFAGLSSVRLLS-LYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 60 (26.2 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
G+FK P+L+ +NLS N ++++ + + L L+ N+ +
Sbjct: 551 GIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLE 594
Score = 60 (26.2 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 24/104 (23%), Positives = 44/104 (42%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
+D S KL R + S P + DL+++ N+I +++ +
Sbjct: 516 VDCSNQKLSR--IPSHLPEYTT--DLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKE 571
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ +G F +Q L L+GN L+ +H +++ L L L N
Sbjct: 572 VREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSN 615
Score = 53 (23.7 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + F L+ L L+ N ++ V F L+++ L + N++ + +F
Sbjct: 590 GNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAF 649
Query: 354 DPIENSLRDLKISGN 368
+ SL + + N
Sbjct: 650 TTLV-SLSTINLLSN 663
Score = 45 (20.9 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L L GN++ + + L+HL L N
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGIN 857
Score = 44 (20.5 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 5 LIFMS--KLKSLDLSYNDIVEINPEIFKDI 32
L+F S KL LDLS N I I + F+ +
Sbjct: 127 LLFQSTPKLTRLDLSENQIQGIPRKAFRGV 156
Score = 44 (20.5 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 24/121 (19%), Positives = 40/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I F ++LK + +I P + L L L L N+
Sbjct: 317 NSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFD 376
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L ++ F L ++ L ++
Sbjct: 377 GLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQ 436
Query: 343 N 343
N
Sbjct: 437 N 437
>FB|FBgn0052055 [details] [associations]
symbol:CG32055 species:7227 "Drosophila melanogaster"
[GO:0016942 "insulin-like growth factor binding protein complex"
evidence=ISS] [GO:0005520 "insulin-like growth factor binding"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014296
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00690000101816 HSSP:Q9BZR6 InterPro:IPR026906
Pfam:PF13306 RefSeq:NP_729599.1 UniGene:Dm.27841
ProteinModelPortal:Q9VT89 SMR:Q9VT89 IntAct:Q9VT89 MINT:MINT-901114
EnsemblMetazoa:FBtr0076304 GeneID:39188 KEGG:dme:Dmel_CG32055
UCSC:CG32055-RA FlyBase:FBgn0052055 InParanoid:Q9VT89 OMA:LHSNWLE
OrthoDB:EOG4XD26B PhylomeDB:Q9VT89 GenomeRNAi:39188 NextBio:812398
ArrayExpress:Q9VT89 Bgee:Q9VT89 Uniprot:Q9VT89
Length = 534
Score = 192 (72.6 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 61/255 (23%), Positives = 111/255 (43%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL-YLDF--N 175
LEELH+ ++++ + F+ +P+LR LN+++NN+ + F + L LD+ N
Sbjct: 217 LEELHLHSNWLEHLDMGIFYALPNLRVLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSN 276
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKD 235
++ + SVF L LR L+L N+I+++ PR N I + ++F +
Sbjct: 277 IVKVLDDSVFCRLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFAN 336
Query: 236 IQELKTFKCRSCGLENINPMMYS--ILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXX 293
+ L+ ++ + ++ IL LIYLDL N
Sbjct: 337 LTALEKLDLSKNNIQKLGLRVFGERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLR 396
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
N + + F+ +LQ+L + NRL ++ L L L+++ N+L L
Sbjct: 397 RNRLVSLDLRMFAPLRQLQLLTINENRLEEIDGEILDTLDRLNHLELNNNRLTFLPDLKS 456
Query: 354 DPIENSLRDLKISGN 368
LR++ + GN
Sbjct: 457 SQNLLQLRNITLEGN 471
Score = 136 (52.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 51/235 (21%), Positives = 108/235 (45%)
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
+LR+L++++NN+ + + + L+EL+L N +E + +F L +LRVL++++N +
Sbjct: 192 NLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHLDMGIFYALPNLRVLNVSNNNL 251
Query: 202 SKLAPRXXXXXXXXX-XXXXXYN-DIVEI-NPEIFKDIQELKTFKCRSCGLENINPMMYS 258
++ Y+ +IV++ + +F +++L+T + I+P +
Sbjct: 252 FEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQINRIHPRAFL 311
Query: 259 ILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQF--KLQVLCL 316
L+ L L L N+ N+ + + F + KL L L
Sbjct: 312 GLSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGLRVFGERILRKLIYLDL 371
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
N +A + A +++ + EL + N+L L++ F P+ L+ L I+ N ++
Sbjct: 372 SNNYIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQ-LQLLTINENRLE 425
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 137 (53.3 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 79 MANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHP 136
M N I + + ++ ++ N N L P +FQ Q L L ++ +FI AI
Sbjct: 100 MENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSENFIQAIPRKA 159
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G L+ L L N I+ + D F+ + L+ L L+ N I SIP S F H+ LR L
Sbjct: 160 FRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRL 219
Query: 197 AHNRI 201
N +
Sbjct: 220 HSNHL 224
Score = 133 (51.9 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 53/162 (32%), Positives = 76/162 (46%)
Query: 48 LHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEV-LKIVPSEENPNH 106
L S +S CP MC C+ G IV RG IP + TE+ L++ + P
Sbjct: 281 LCSLSSGSCPAMCTCS---NG---IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPG 334
Query: 107 LTIGPIFQQFQHLEEL---HITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P +++ + + L ++N+ I I F G+ SL L L N IT L F G
Sbjct: 335 -AFSP-YKKLRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFGG 392
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ LQ L L+ NKI + + F L +L +LSL N+I LA
Sbjct: 393 LFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLA 434
Score = 119 (46.9 bits), Expect = 4.8e-10, Sum P(3) = 4.8e-10
Identities = 53/205 (25%), Positives = 84/205 (40%)
Query: 44 FLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEEN 103
F+ L A+ CP +C C+ G + C G +P + GTE L++ N
Sbjct: 30 FVALCRGRAAA-CPPLCACS----GT-TVDCH-GTALRAVP-KSIPRGTERLEL-----N 76
Query: 104 PNHLT-IGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF 161
N++T I F + L L + + I + F + L L L N + +L + F
Sbjct: 77 GNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLF 136
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
+ L L L N I++IP F +DL+ L L N+IS +
Sbjct: 137 QHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLN 196
Query: 222 YNDIVEINPEIFKDIQELKTFKCRS 246
N+I I F + +L+TF+ S
Sbjct: 197 NNNITSIPVSSFNHMPKLRTFRLHS 221
Score = 100 (40.3 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 32/133 (24%), Positives = 55/133 (41%)
Query: 120 EELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES 179
E L + + I I + F G+ LR L L N I+ + F M L+ L L+ N++ +
Sbjct: 71 ERLELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHT 130
Query: 180 IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQEL 239
+P +F H L L L+ N I + + N I I F+ ++ L
Sbjct: 131 LPELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGL 190
Query: 240 KTFKCRSCGLENI 252
+ + + +I
Sbjct: 191 EVLTLNNNNITSI 203
Score = 86 (35.3 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 36/140 (25%), Positives = 56/140 (40%)
Query: 230 PEIFKDIQ-ELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXX 288
PE +I+ EL K G + + IL L + DL NQ
Sbjct: 315 PETMTEIRLELNGIKSIPPGAFSPYKKLRRILP-LGFRDLSNNQISEIAPDAFQGLRSLN 373
Query: 289 XXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
GN + + F F LQ+L L N++ V AF +L NL L + NK+ L
Sbjct: 374 SLVLYGNKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSL 433
Query: 349 EVASFDPIENSLRDLKISGN 368
+F + +++ L ++ N
Sbjct: 434 AKGTFTSLR-AIQTLHLAQN 452
Score = 68 (29.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 34/163 (20%), Positives = 62/163 (38%)
Query: 323 KVTTTAFTNLTN-LIELDISYNKLDRLEVASFDPIENSLRDLKIS----GNNIQXXXXXX 377
K T NL + E+ + N + + +F P + R L + NN
Sbjct: 305 KGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYKKLRRILPLGFRDLSNNQISEIAPD 364
Query: 378 XXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLD 437
+ TD+PKG+F LQ L L+ N + + +Q L+ L
Sbjct: 365 AFQGLRSLNSLVLYGNKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLS 424
Query: 438 LSRNKFKGFDEKSYI-MSEPKNIHKAAKNSFALQSSMGKNAEY 479
L NK + + ++ + + +H A+N F ++ A++
Sbjct: 425 LYDNKIQSLAKGTFTSLRAIQTLH-LAQNPFVCDCNLKWLADF 466
Score = 66 (28.3 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 310 KLQVL-CLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
+LQ L L+ NR++ + +FT L N+ L + N++ + +FD ++ SL L + N
Sbjct: 627 QLQPLGMLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTIAPGAFDTLQ-SLSTLNLLAN 685
Score = 63 (27.2 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNL 425
G+FK PHL+ +NLS N + +I +
Sbjct: 572 GIFKKLPHLKKINLSNNKVSEIEGI 596
Score = 48 (22.0 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N I SF+ +++L L N+++ + AF L +L L++ N
Sbjct: 637 NRISCIHNDSFTGLRNVRLLSLYDNQISTIAPGAFDTLQSLSTLNLLAN 685
Score = 44 (20.5 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLE 349
L L N ++ + T F L +L ++++S NK+ +E
Sbjct: 558 LRLNNNEISILEATGIFKKLPHLKKINLSNNKVSEIE 594
Score = 43 (20.2 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQ 428
+T +P G +LQ + LS N+LQ I L ++
Sbjct: 787 FTQVP-GQLSTFKYLQLVILSYNSLQCIPPLAFE 819
>UNIPROTKB|F1S5C4 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:CU929485
Ensembl:ENSSSCT00000009572 OMA:XVETIND Uniprot:F1S5C4
Length = 1045
Score = 127 (49.8 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 117 QHLEELHITNS---FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ EL + N+ + A G F +P LR +N ++N IT + + F+G + E+ L
Sbjct: 46 QYTAELRLNNNEFTVLEATGI--FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 103
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
N++E++ +F L L+ L + NRIS + N I I P F
Sbjct: 104 SNRLENVQYKMFKGLESLKTLDVRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAF 163
Query: 234 KDIQELKT 241
+ L T
Sbjct: 164 DTLHSLST 171
Score = 124 (48.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 43/155 (27%), Positives = 76/155 (49%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A + CP C C G + C ++ IP + T L++ +E T G
Sbjct: 15 ADLACPEKCRC----EGT-TVDCSNQKLSK-IP-DHIPQYTAELRLNNNEFTVLEAT-G- 65
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF++ L +++ +N+ I I F G + + LT N + ++ FKG+ +L+ L
Sbjct: 66 IFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQYKMFKGLESLKTLD 125
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ N+I + + F+ LS +R+LSL N+I+ +AP
Sbjct: 126 VRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAP 160
Score = 120 (47.3 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN F ++ K S+ L ++ L NR++ ++ +F+N+T L+ L +SYN+L L +F
Sbjct: 276 GNQFTLV-PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCLPPRTF 334
Query: 354 DPIENSLRDLKISGNNI 370
D ++ SLR L + GN+I
Sbjct: 335 DGLK-SLRLLSLHGNDI 350
Score = 82 (33.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 23/87 (26%), Positives = 47/87 (54%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + E+ +T++ + + + F G+ SL+ L++ N I+ + + +F G+ +++ L L
Sbjct: 91 FEGASGVNEILLTSNRLENVQYKMFKGLESLKTLDVRSNRISCVGNDSFIGLSSVRLLSL 150
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHN 199
N+I +I F L L L+L N
Sbjct: 151 YDNQITTIAPGAFDTLHSLSTLNLLAN 177
Score = 71 (30.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 169 ELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
EL L+ N+ + ++ +F L LR ++ ++N+I+ + N +
Sbjct: 50 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 109
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
+ ++FK ++ LKT RS + + + L+ + L L NQ
Sbjct: 110 VQYKMFKGLESLKTLDVRSNRISCVGNDSFIGLSSVRLLSLYDNQ 154
Score = 64 (27.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + +SFS+ +L L L NRL + F L +L L + N + + +F+
Sbjct: 300 NRISTLSNQSFSNMTQLLTLILSYNRLRCLPPRTFDGLKSLRLLSLHGNDISVVPEGAFN 359
Query: 355 PIENSLRDLKISGN 368
+ ++L L I N
Sbjct: 360 DL-SALSHLAIGAN 372
Score = 62 (26.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
+T +PK L HL ++LS N + + N + + +L L LS N+ + +++
Sbjct: 279 FTLVPKELSNYK-HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCLPPRTF 334
Score = 59 (25.8 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 26/124 (20%), Positives = 44/124 (35%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L L +N T L FK + L+++ NKI I F S + + L NR+ +
Sbjct: 51 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 110
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
+ N I + + F + ++ + I P + L L
Sbjct: 111 QYKMFKGLESLKTLDVRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLS 170
Query: 265 YLDL 268
L+L
Sbjct: 171 TLNL 174
Score = 53 (23.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 21/92 (22%), Positives = 32/92 (34%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N+ N + ++F L++
Sbjct: 283 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCLPPRTFDGLKSLRL 342
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V AF +L+ L L I N L
Sbjct: 343 LSLHGNDISVVPEGAFNDLSALSHLAIGANPL 374
Score = 43 (20.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 17/92 (18%), Positives = 32/92 (34%)
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
P+ + + L + + ++ +S + L+ L L YN+
Sbjct: 283 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCLPPRTFDGLKSLRL 342
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
GN V+ E +F+ L L + N L
Sbjct: 343 LSLHGNDISVVPEGAFNDLSALSHLAIGANPL 374
Score = 42 (19.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+P F L+ L+L GN++ + + L+HL + N
Sbjct: 329 LPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 372
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 192 (72.6 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 64/229 (27%), Positives = 98/229 (42%)
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
S + L+L +N++ ++L Y F + L LYLD N+I + S F + L+ L L+ NRI
Sbjct: 59 SCQGLSLRYNDLHTMLPYQFAHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRI 118
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
S+L YN + E+ P F +++L+ RS GL I +
Sbjct: 119 SQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECR 178
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
L +LDLGYN+ N F I F L+ L L+ NR+
Sbjct: 179 SLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRI 238
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
V + L LDIS N++ L+ F + N L+ L + N +
Sbjct: 239 RAVNQGLPWSWYTLQRLDISGNEIQVLDPVVFQCLPN-LQVLNLESNKL 286
Score = 188 (71.2 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 76/303 (25%), Positives = 121/303 (39%)
Query: 47 LLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNH 106
LL SS MCPY C C G+ + C + +P + + + L + N H
Sbjct: 22 LLFSSGERMCPYSCHC----EGKI-VHCESSAFQD-VP-ENISVSCQGLSL---RYNDLH 71
Query: 107 LTIGPIFQQFQHLEEL---HITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
T+ P QF HL +L ++ ++ I + F GV L+ L L+ N I+ L + F G
Sbjct: 72 -TMLPY--QFAHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQLHNVTFHG 128
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
+ NL+ L L +NK++ + F L L+ L L N ++ + R YN
Sbjct: 129 VPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYN 188
Query: 224 DIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXX 283
+ + F + L IN ++ LA+L L L +N+
Sbjct: 189 RLRVLTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRIRAVNQGLPWS 248
Query: 284 XXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
GN V+ F LQVL L+ N+LA V+ +L + ++ N
Sbjct: 249 WYTLQRLDISGNEIQVLDPVVFQCLPNLQVLNLESNKLANVSQEVVAAWISLTTISLAGN 308
Query: 344 KLD 346
D
Sbjct: 309 MWD 311
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 59/272 (21%), Positives = 110/272 (40%)
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN 229
++ + + + +P ++ + L SL +N + + P +N I+ ++
Sbjct: 42 VHCESSAFQDVPENISVSCQGL---SLRYNDLHTMLPYQFAHLNQLLWLYLDHNQIMFVD 98
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
F+ ++ LK S + ++ + + + +L LDL YN+
Sbjct: 99 SRAFQGVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQN 158
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
N I ++F L+ L L NRL +T TAF L+ L+EL + +N+ R+
Sbjct: 159 LHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRIN 218
Query: 350 VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
F + N LR L + N I+ I+ + +F+ P+L
Sbjct: 219 FFLFPRLAN-LRALYLQWNRIRAVNQGLPWSWYTLQRLD-ISGNEIQVLDPVVFQCLPNL 276
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
Q LNL N L ++ + + I LT + L+ N
Sbjct: 277 QVLNLESNKLANVSQEVVAAWISLTTISLAGN 308
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 145 (56.1 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 48/172 (27%), Positives = 77/172 (44%)
Query: 47 LLHSSASVMCPYMCECA---LDDRGRYEIVCRRG----------DMANPIPIGQMDL-GT 92
+L +V CP C C+ +D G RG D N I +MD G
Sbjct: 25 VLSGPPAVACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFAGL 84
Query: 93 EVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN 152
+ L+++ E+N + FQ + LE L + + + + F P L L+L+ N
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQ 144
Query: 153 ITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
I + F+G+ +++ L LD N I I F L DL +L+L +N IS++
Sbjct: 145 IQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRI 196
Score = 138 (53.6 bits), Expect = 5.0e-10, Sum P(4) = 5.0e-10
Identities = 45/153 (29%), Positives = 76/153 (49%)
Query: 53 SVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPI 112
S+ CP C C+ + IV RG IP +L +++I + + + G
Sbjct: 277 SISCPSPCTCSNN------IVDCRGKGLMEIPA---NLPEGIVEIRLEQNSIKAIPAGA- 326
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F Q++ L+ + I+ + I I F G+ SL L L N IT ++ F G+++LQ L L
Sbjct: 327 FTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLL 386
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ NKI + + F L +L +LSL N++ ++
Sbjct: 387 NANKINCLRVNTFQDLQNLNLLSLYDNKLQTIS 419
Score = 131 (51.2 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 54 VMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIF 113
++CP C C G + C + IP + T+ L++ +E + T G IF
Sbjct: 503 LVCPEKCRC----EGTI-VDCSNQKLVR-IPSHLPEYVTD-LRLNDNEVSVLEAT-G-IF 553
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
++ +L +++++N+ I + F G S++ L LT N + ++ F+G+ L+ L L
Sbjct: 554 KKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLR 613
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N I + + F LS +R+LSL NRI+ + P
Sbjct: 614 SNLIGCVSNDTFAGLSSVRLLSLYDNRITTITP 646
Score = 123 (48.4 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 41/143 (28%), Positives = 63/143 (44%)
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P+HL P + L + + S + A G F +P+LR +NL++N I + + F G
Sbjct: 527 PSHL---PEYVTDLRLNDNEV--SVLEATGI--FKKLPNLRKINLSNNKIKEVREGAFDG 579
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
++QEL L N++E++ VF LS L+ L L N I ++ N
Sbjct: 580 AASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDN 639
Query: 224 DIVEINPEIFKDIQELKTFKCRS 246
I I P F + L T S
Sbjct: 640 RITTITPGAFTTLVSLSTINLLS 662
Score = 119 (46.9 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 36/134 (26%), Positives = 57/134 (42%)
Query: 139 GVP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
G+P + L+L NNIT + +F G+ NL+ L+L+ N++ I F L L L L
Sbjct: 58 GIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLN 117
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
N++ L N I I + F+ I ++K + + + I +
Sbjct: 118 KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAF 177
Query: 258 SILADLIYLDLGYN 271
L DL L L N
Sbjct: 178 RALRDLEILTLNNN 191
Score = 113 (44.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
EL++ + + A+ + L ++L++N+I+ L +Y F M +L L L +N++ I
Sbjct: 756 ELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCI 814
Query: 181 PSSVFMHLSDLRVLSLAHNRISKL 204
P F L LRVL+L N IS +
Sbjct: 815 PVHAFNGLRSLRVLTLHGNDISSV 838
Score = 110 (43.8 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L + P +FQ L L ++ + I I F G+ ++ L L +N+I+ + D
Sbjct: 117 NKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGA 176
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + +L+ L L+ N I I + F H+ +R L L N +
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 103 (41.3 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + + S+ L ++ L N ++ +T F+N+++L L +SYN+L + V +F
Sbjct: 761 GNHLTAV-PRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAF 819
Query: 354 DPIENSLRDLKISGNNI 370
+ + SLR L + GN+I
Sbjct: 820 NGLR-SLRVLTLHGNDI 835
Score = 96 (38.9 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 30/136 (22%), Positives = 59/136 (43%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ E L + + I I F G+ +LR L+L N ++ + F+ + L+ L L+ NK
Sbjct: 61 RNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNK 120
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ +P +F L L L+ N+I + + N I I F+ +
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 237 QELKTFKCRSCGLENI 252
++L+ + + I
Sbjct: 181 RDLEILTLNNNNISRI 196
Score = 96 (38.9 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 30/121 (24%), Positives = 54/121 (44%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
E+ + + I AI F L+ ++++ N I+ + F+G+ +L L L NKI I
Sbjct: 311 EIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
+F L L++L L N+I+ L N + I+ +F +Q ++
Sbjct: 371 VKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQ 430
Query: 241 T 241
T
Sbjct: 431 T 431
Score = 85 (35.0 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 25/103 (24%), Positives = 42/103 (40%)
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
+D+ NQ GN I++ F LQ+L L N++ +
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLR 395
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
F +L NL L + NKL + F P++ S++ L ++ N
Sbjct: 396 VNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQ-SIQTLHLAQN 437
Score = 83 (34.3 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 31/122 (25%), Positives = 53/122 (43%)
Query: 155 SLLDYNFKGMM----NLQE----LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+++D KG+M NL E + L+ N I++IP+ F L+ + ++ N+IS +AP
Sbjct: 289 NIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAP 348
Query: 207 RXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
N I EI +F + L+ + IN + + DL L
Sbjct: 349 DAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNA---NKINCLRVNTFQDLQNL 405
Query: 267 DL 268
+L
Sbjct: 406 NL 407
Score = 80 (33.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 30/123 (24%), Positives = 52/123 (42%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N I +F+ KL+ + + +N+++ + AF L +L L + NK+ + FD
Sbjct: 317 NSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFD 376
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ SL+ L ++ N I + D I KGLF +Q L+L
Sbjct: 377 GLV-SLQLLLLNANKINCLRVNTFQDLQNLNLLS-LYDNKLQTISKGLFAPLQSIQTLHL 434
Query: 415 SGN 417
+ N
Sbjct: 435 AQN 437
Score = 77 (32.2 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 31/128 (24%), Positives = 52/128 (40%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N + + AFT L +DIS N++ + +F ++ SL L + GN I
Sbjct: 314 LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLK-SLTSLVLYGNKITEIVK 372
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + F+ +L L+L N LQ I L+ +
Sbjct: 373 GLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 432 LHLAQNPF 439
Score = 75 (31.5 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
++EL +T + + + F G+ L+ L L N I + + F G+ +++ L L N+I
Sbjct: 583 VQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRIT 642
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
+I F L L ++L N
Sbjct: 643 TITPGAFTTLVSLSTINLLSN 663
Score = 73 (30.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 31/146 (21%), Positives = 56/146 (38%)
Query: 335 LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMN 394
++E+ + N + + +F + L+ + IS N I +
Sbjct: 309 IVEIRLEQNSIKAIPAGAFTQYKK-LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGN-K 366
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI-M 453
T+I KGLF LQ L L+ N + + +Q L L L NK + + + +
Sbjct: 367 ITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 454 SEPKNIHKAAKNSFALQSSMGKNAEY 479
+ +H A+N F + A+Y
Sbjct: 427 QSIQTLH-LAQNPFVCDCHLKWLADY 451
Score = 70 (29.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 26/125 (20%), Positives = 52/125 (41%)
Query: 146 LNLTHNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
L L N + S+L+ FK + NL+++ L NKI+ + F + ++ L L N++
Sbjct: 537 LRLNDNEV-SVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLET 595
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
+ R N I ++ + F + ++ + I P ++ L L
Sbjct: 596 VHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSL 655
Query: 264 IYLDL 268
++L
Sbjct: 656 STINL 660
Score = 69 (29.3 bits), Expect = 5.0e-10, Sum P(4) = 5.0e-10
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T F L NL ++++S NK+ + +FD S+++L ++GN ++
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAA-SVQELMLTGNQLE 594
Score = 69 (29.3 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N ++ +FS+ L L L NRL + AF L +L L + N + + SF+
Sbjct: 785 NSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 844
Query: 355 PIENSLRDLKISGN 368
+ SL L + N
Sbjct: 845 DL-TSLSHLALGTN 857
Score = 65 (27.9 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 23/92 (25%), Positives = 33/92 (35%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L L +DL N N I +F+ L+V
Sbjct: 768 PRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRV 827
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V +F +LT+L L + N L
Sbjct: 828 LTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 62 (26.9 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
G+FK P+L+ +NLS N ++++ + + L L+ N+ +
Sbjct: 551 GIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLE 594
Score = 61 (26.5 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KLK +D+S N I +I P+ F+ ++ T L
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 61 (26.5 bits), Expect = 3.1e-09, Sum P(4) = 3.1e-09
Identities = 22/112 (19%), Positives = 42/112 (37%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
IFK + L+ + ++ + + A + L L NQ
Sbjct: 552 IFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLM 611
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N + +F+ +++L L NR+ +T AFT L +L +++ N
Sbjct: 612 LRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 60 (26.2 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 23/104 (22%), Positives = 43/104 (41%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
+D S KL R + S P + DL+++ N + +++ +
Sbjct: 516 VDCSNQKLVR--IPSHLP--EYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKE 571
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ +G F +Q L L+GN L+ +H +++ L L L N
Sbjct: 572 VREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSN 615
Score = 58 (25.5 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 396 TDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
T +P+ L + HL ++LS N++ + N + + L+ L LS N+ +
Sbjct: 765 TAVPRELSALR-HLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLR 812
Score = 57 (25.1 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 27/120 (22%), Positives = 47/120 (39%)
Query: 300 ILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+LE + F L+ + L N++ +V AF ++ EL ++ N+L+ + F +
Sbjct: 546 VLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGL- 604
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
+ L+ L + N I + D T I G F L +NL N
Sbjct: 605 SGLKTLMLRSNLI-GCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 53 (23.7 bits), Expect = 1.9e-08, Sum P(4) = 1.9e-08
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + F L+ L L+ N + V+ F L+++ L + N++ + +F
Sbjct: 590 GNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 649
Query: 354 DPIENSLRDLKISGN 368
+ SL + + N
Sbjct: 650 TTLV-SLSTINLLSN 663
Score = 51 (23.0 bits), Expect = 5.0e-10, Sum P(4) = 5.0e-10
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 5 LIFMS--KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+F S KL LDLS N I I + F+ I D L
Sbjct: 127 LLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNL 162
Score = 47 (21.6 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L L GN++ + + L+HL L N
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
Score = 46 (21.3 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 24/121 (19%), Positives = 40/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I F ++LK + +I P + L L L L N+
Sbjct: 317 NSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFD 376
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L ++ F L ++ L ++
Sbjct: 377 GLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQ 436
Query: 343 N 343
N
Sbjct: 437 N 437
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 192 (72.6 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 87/401 (21%), Positives = 153/401 (38%)
Query: 45 LYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENP 104
L+LL + CP C CA D + C RG +A I + L T + I+ +
Sbjct: 11 LWLLRAQP-FPCPPTCRCAFRDAAQ----CSRGTVAG---IAALGLPTNLTHILLFQMGR 62
Query: 105 NHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGM 164
L F L+ L +++S + AI F L+ L L+ N IT L +
Sbjct: 63 GTLQNNS-FSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNL 121
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND 224
+ L++L+LD N+++S+ ++F L L+ L L N+++ L N+
Sbjct: 122 VLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNN 181
Query: 225 IVEINPEIFKDIQ-ELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXX 283
+ + PE +Q +L+ S L ++ + L L L L N
Sbjct: 182 LTHL-PEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDR 240
Query: 284 XXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N + F L L L N L ++ F + L EL +
Sbjct: 241 LRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKST 300
Query: 344 KLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLF 403
+L L A+F + LR L++S + ++ +P GL
Sbjct: 301 QLRTLPAAAFRNL-TGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLL 359
Query: 404 KMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
+ L+ ++L N L+ + + L+++ L + L N+ +
Sbjct: 360 RGLCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQLE 400
Score = 95 (38.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 49/236 (20%), Positives = 91/236 (38%)
Query: 38 LFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKI 97
LFQ + L L + + + ++ G +++ G+ +P G + ++ K+
Sbjct: 141 LFQKLVHLQELFLNQNQLA-FLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKL 199
Query: 98 VPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLL 157
+ L G + + L EL + + + +I F + SL L L+ N + L
Sbjct: 200 LLHSNRLASLESG-LLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLP 258
Query: 158 DYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXX 217
F NL L L N +E +P +F + LR L L ++ L
Sbjct: 259 SALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRV 318
Query: 218 XXXXYNDIVEINPE-IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
+ + PE F+ + EL+ S GL ++ + L L ++ L N+
Sbjct: 319 LEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNR 374
Score = 70 (29.7 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 14/47 (29%), Positives = 30/47 (63%)
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
+L+ + L+ NRL + + F NL++L E+ + +N+L+ L +F+ +
Sbjct: 364 RLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQLETLPGDAFEAL 410
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 145 (56.1 bits), Expect = 9.3e-12, Sum P(3) = 9.3e-12
Identities = 48/172 (27%), Positives = 77/172 (44%)
Query: 47 LLHSSASVMCPYMCECA---LDDRGRYEIVCRRG----------DMANPIPIGQMDL-GT 92
+L +V CP C C+ +D G RG D N I +MD G
Sbjct: 25 VLSGPPAVACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFAGL 84
Query: 93 EVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN 152
+ L+++ E+N + FQ + LE L + + + + F P L L+L+ N
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQ 144
Query: 153 ITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
I + F+G+ +++ L LD N I I F L DL +L+L +N IS++
Sbjct: 145 IQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRI 196
Score = 138 (53.6 bits), Expect = 5.1e-10, Sum P(4) = 5.1e-10
Identities = 45/153 (29%), Positives = 76/153 (49%)
Query: 53 SVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPI 112
S+ CP C C+ + IV RG IP +L +++I + + + G
Sbjct: 277 SISCPSPCTCSNN------IVDCRGKGLMEIPA---NLPEGIVEIRLEQNSIKAIPAGA- 326
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F Q++ L+ + I+ + I I F G+ SL L L N IT ++ F G+++LQ L L
Sbjct: 327 FTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLL 386
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ NKI + + F L +L +LSL N++ ++
Sbjct: 387 NANKINCLRVNTFQDLQNLNLLSLYDNKLQTIS 419
Score = 131 (51.2 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 54 VMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIF 113
++CP C C G + C + IP + T+ L++ +E + T G IF
Sbjct: 503 LVCPEKCRC----EGTI-VDCSNQKLVR-IPSHLPEYVTD-LRLNDNEVSVLEAT-G-IF 553
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
++ +L +++++N+ I + F G S++ L LT N + ++ F+G+ L+ L L
Sbjct: 554 KKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLR 613
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N I + + F LS +R+LSL NRI+ + P
Sbjct: 614 SNLIGCVSNDTFAGLSSVRLLSLYDNRITTITP 646
Score = 123 (48.4 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 41/143 (28%), Positives = 63/143 (44%)
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P+HL P + L + + S + A G F +P+LR +NL++N I + + F G
Sbjct: 527 PSHL---PEYVTDLRLNDNEV--SVLEATGI--FKKLPNLRKINLSNNKIKEVREGAFDG 579
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
++QEL L N++E++ VF LS L+ L L N I ++ N
Sbjct: 580 AASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDN 639
Query: 224 DIVEINPEIFKDIQELKTFKCRS 246
I I P F + L T S
Sbjct: 640 RITTITPGAFTTLVSLSTINLLS 662
Score = 119 (46.9 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 36/134 (26%), Positives = 57/134 (42%)
Query: 139 GVP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
G+P + L+L NNIT + +F G+ NL+ L+L+ N++ I F L L L L
Sbjct: 58 GIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLN 117
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
N++ L N I I + F+ I ++K + + + I +
Sbjct: 118 KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAF 177
Query: 258 SILADLIYLDLGYN 271
L DL L L N
Sbjct: 178 RALRDLEILTLNNN 191
Score = 113 (44.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
EL++ + + A+ + L ++L++N+I+ L +Y F M +L L L +N++ I
Sbjct: 756 ELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCI 814
Query: 181 PSSVFMHLSDLRVLSLAHNRISKL 204
P F L LRVL+L N IS +
Sbjct: 815 PVHAFNGLRSLRVLTLHGNDISSV 838
Score = 110 (43.8 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L + P +FQ L L ++ + I I F G+ ++ L L +N+I+ + D
Sbjct: 117 NKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGA 176
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
F+ + +L+ L L+ N I I + F H+ +R L L N +
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 103 (41.3 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + + S+ L ++ L N ++ +T F+N+++L L +SYN+L + V +F
Sbjct: 761 GNHLTAV-PRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAF 819
Query: 354 DPIENSLRDLKISGNNI 370
+ + SLR L + GN+I
Sbjct: 820 NGLR-SLRVLTLHGNDI 835
Score = 96 (38.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 30/136 (22%), Positives = 59/136 (43%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ E L + + I I F G+ +LR L+L N ++ + F+ + L+ L L+ NK
Sbjct: 61 RNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNK 120
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
++ +P +F L L L+ N+I + + N I I F+ +
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 237 QELKTFKCRSCGLENI 252
++L+ + + I
Sbjct: 181 RDLEILTLNNNNISRI 196
Score = 96 (38.9 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 30/121 (24%), Positives = 54/121 (44%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
E+ + + I AI F L+ ++++ N I+ + F+G+ +L L L NKI I
Sbjct: 311 EIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
+F L L++L L N+I+ L N + I+ +F +Q ++
Sbjct: 371 VKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQ 430
Query: 241 T 241
T
Sbjct: 431 T 431
Score = 85 (35.0 bits), Expect = 9.3e-12, Sum P(3) = 9.3e-12
Identities = 25/103 (24%), Positives = 42/103 (40%)
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
+D+ NQ GN I++ F LQ+L L N++ +
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLR 395
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
F +L NL L + NKL + F P++ S++ L ++ N
Sbjct: 396 VNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQ-SIQTLHLAQN 437
Score = 83 (34.3 bits), Expect = 0.00035, Sum P(4) = 0.00035
Identities = 31/122 (25%), Positives = 53/122 (43%)
Query: 155 SLLDYNFKGMM----NLQE----LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+++D KG+M NL E + L+ N I++IP+ F L+ + ++ N+IS +AP
Sbjct: 289 NIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAP 348
Query: 207 RXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
N I EI +F + L+ + IN + + DL L
Sbjct: 349 DAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNA---NKINCLRVNTFQDLQNL 405
Query: 267 DL 268
+L
Sbjct: 406 NL 407
Score = 80 (33.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 30/123 (24%), Positives = 52/123 (42%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N I +F+ KL+ + + +N+++ + AF L +L L + NK+ + FD
Sbjct: 317 NSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFD 376
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ SL+ L ++ N I + D I KGLF +Q L+L
Sbjct: 377 GLV-SLQLLLLNANKINCLRVNTFQDLQNLNLLS-LYDNKLQTISKGLFAPLQSIQTLHL 434
Query: 415 SGN 417
+ N
Sbjct: 435 AQN 437
Score = 77 (32.2 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 31/128 (24%), Positives = 52/128 (40%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N + + AFT L +DIS N++ + +F ++ SL L + GN I
Sbjct: 314 LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLK-SLTSLVLYGNKITEIVK 372
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + F+ +L L+L N LQ I L+ +
Sbjct: 373 GLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 432 LHLAQNPF 439
Score = 75 (31.5 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
++EL +T + + + F G+ L+ L L N I + + F G+ +++ L L N+I
Sbjct: 583 VQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRIT 642
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
+I F L L ++L N
Sbjct: 643 TITPGAFTTLVSLSTINLLSN 663
Score = 73 (30.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 31/146 (21%), Positives = 56/146 (38%)
Query: 335 LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMN 394
++E+ + N + + +F + L+ + IS N I +
Sbjct: 309 IVEIRLEQNSIKAIPAGAFTQYKK-LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGN-K 366
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI-M 453
T+I KGLF LQ L L+ N + + +Q L L L NK + + + +
Sbjct: 367 ITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 454 SEPKNIHKAAKNSFALQSSMGKNAEY 479
+ +H A+N F + A+Y
Sbjct: 427 QSIQTLH-LAQNPFVCDCHLKWLADY 451
Score = 70 (29.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 26/125 (20%), Positives = 52/125 (41%)
Query: 146 LNLTHNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
L L N + S+L+ FK + NL+++ L NKI+ + F + ++ L L N++
Sbjct: 537 LRLNDNEV-SVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLET 595
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
+ R N I ++ + F + ++ + I P ++ L L
Sbjct: 596 VHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSL 655
Query: 264 IYLDL 268
++L
Sbjct: 656 STINL 660
Score = 69 (29.3 bits), Expect = 5.1e-10, Sum P(4) = 5.1e-10
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T F L NL ++++S NK+ + +FD S+++L ++GN ++
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAA-SVQELMLTGNQLE 594
Score = 69 (29.3 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N ++ +FS+ L L L NRL + AF L +L L + N + + SF+
Sbjct: 785 NSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 844
Query: 355 PIENSLRDLKISGN 368
+ SL L + N
Sbjct: 845 DL-TSLSHLALGTN 857
Score = 65 (27.9 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 23/92 (25%), Positives = 33/92 (35%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L L +DL N N I +F+ L+V
Sbjct: 768 PRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRV 827
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V +F +LT+L L + N L
Sbjct: 828 LTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 62 (26.9 bits), Expect = 9.3e-12, Sum P(3) = 9.3e-12
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
G+FK P+L+ +NLS N ++++ + + L L+ N+ +
Sbjct: 551 GIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLE 594
Score = 61 (26.5 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KLK +D+S N I +I P+ F+ ++ T L
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSL 360
Score = 61 (26.5 bits), Expect = 3.1e-09, Sum P(4) = 3.1e-09
Identities = 22/112 (19%), Positives = 42/112 (37%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
IFK + L+ + ++ + + A + L L NQ
Sbjct: 552 IFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLM 611
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N + +F+ +++L L NR+ +T AFT L +L +++ N
Sbjct: 612 LRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 60 (26.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 23/104 (22%), Positives = 43/104 (41%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
+D S KL R + S P + DL+++ N + +++ +
Sbjct: 516 VDCSNQKLVR--IPSHLP--EYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKE 571
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ +G F +Q L L+GN L+ +H +++ L L L N
Sbjct: 572 VREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSN 615
Score = 58 (25.5 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 396 TDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
T +P+ L + HL ++LS N++ + N + + L+ L LS N+ +
Sbjct: 765 TAVPRELSALR-HLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLR 812
Score = 57 (25.1 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 27/120 (22%), Positives = 47/120 (39%)
Query: 300 ILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+LE + F L+ + L N++ +V AF ++ EL ++ N+L+ + F +
Sbjct: 546 VLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGL- 604
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
+ L+ L + N I + D T I G F L +NL N
Sbjct: 605 SGLKTLMLRSNLI-GCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 53 (23.7 bits), Expect = 1.9e-08, Sum P(4) = 1.9e-08
Identities = 16/75 (21%), Positives = 33/75 (44%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + F L+ L L+ N + V+ F L+++ L + N++ + +F
Sbjct: 590 GNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 649
Query: 354 DPIENSLRDLKISGN 368
+ SL + + N
Sbjct: 650 TTLV-SLSTINLLSN 663
Score = 51 (23.0 bits), Expect = 5.1e-10, Sum P(4) = 5.1e-10
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 5 LIFMS--KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+F S KL LDLS N I I + F+ I D L
Sbjct: 127 LLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNL 162
Score = 47 (21.6 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L L GN++ + + L+HL L N
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
Score = 46 (21.3 bits), Expect = 7.9e-08, Sum P(3) = 7.9e-08
Identities = 24/121 (19%), Positives = 40/121 (33%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I F ++LK + +I P + L L L L N+
Sbjct: 317 NSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFD 376
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + +F L +L L N+L ++ F L ++ L ++
Sbjct: 377 GLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQ 436
Query: 343 N 343
N
Sbjct: 437 N 437
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 140 (54.3 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 45/153 (29%), Positives = 75/153 (49%)
Query: 53 SVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPI 112
S+ CP C C+ + IV RG IP +L +++I + + + G
Sbjct: 91 SISCPSACTCSNN------IVDCRGKGLTEIPA---NLPEGIVEIRLEQNSIKSIPAGA- 140
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F Q++ L+ + I+ + I I F G+ SL L L N IT + F G+++LQ L L
Sbjct: 141 FTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLL 200
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ NKI + + F L +L +LSL N++ ++
Sbjct: 201 NANKINCLRVNTFQDLQNLNLLSLYDNKLQTIS 233
Score = 139 (54.0 bits), Expect = 6.7e-12, Sum P(3) = 6.7e-12
Identities = 43/152 (28%), Positives = 78/152 (51%)
Query: 55 MCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQ 114
+CP C C G + C +A +P + T+ L++ +E + T G +F+
Sbjct: 320 LCPDKCRC----EGTI-VDCSNQKLAR-VPSHLPEYVTD-LRLNDNEISVLEAT-G-VFK 370
Query: 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
+ +L +++++N+ I + F G S++ L LT N + ++ F+G+ L+ L L
Sbjct: 371 KLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRS 430
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N I + + F+ LS +R+LSL NRIS + P
Sbjct: 431 NLISCVSNDTFVGLSSVRLLSLYDNRISTITP 462
Score = 121 (47.7 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 42/143 (29%), Positives = 64/143 (44%)
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P+HL P + L + I S + A G F +P+LR +NL++N I + + F G
Sbjct: 343 PSHL---PEYVTDLRLNDNEI--SVLEATGV--FKKLPNLRKINLSNNKIKEVREGAFDG 395
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
++QEL L N++E++ +F LS L+ L L N IS ++ N
Sbjct: 396 AASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDN 455
Query: 224 DIVEINPEIFKDIQELKTFKCRS 246
I I P F + L T S
Sbjct: 456 RISTITPGAFTTLVSLSTINLLS 478
Score = 100 (40.3 bits), Expect = 6.7e-12, Sum P(3) = 6.7e-12
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + + S L ++ L N + +T F+N+++L L +SYN+L + + SF
Sbjct: 578 GNHLTAV-PRELSIFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSF 636
Query: 354 DPIENSLRDLKISGNNI 370
+ + SLR L + GN+I
Sbjct: 637 NGLR-SLRVLTLHGNDI 652
Score = 100 (40.3 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
E+ + + I +I F L+ ++++ N I+ + F+G+ +L L L NKI I
Sbjct: 125 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEI 184
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
P +F L L++L L N+I+ L N + I+ +F +Q ++
Sbjct: 185 PKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQ 244
Query: 241 T 241
T
Sbjct: 245 T 245
Score = 78 (32.5 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
++EL +T + + + F G+ L+ L L N I+ + + F G+ +++ L L N+I
Sbjct: 399 VQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRIS 458
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
+I F L L ++L N
Sbjct: 459 TITPGAFTTLVSLSTINLLSN 479
Score = 77 (32.2 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 25/100 (25%), Positives = 42/100 (42%)
Query: 169 ELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI 228
E+ L+ N I+SIP+ F L+ + ++ N+IS +A N I EI
Sbjct: 125 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEI 184
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
+F + L+ + IN + + DL L+L
Sbjct: 185 PKGLFDGLVSLQLLLLNA---NKINCLRVNTFQDLQNLNL 221
Score = 74 (31.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 28/126 (22%), Positives = 49/126 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+ L N+I S+ F L+ + + N+I I + F L L L L N+I+++
Sbjct: 126 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEIP 185
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
N I + F+D+Q L L+ I+ +++ L +
Sbjct: 186 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQT 245
Query: 266 LDLGYN 271
L L N
Sbjct: 246 LHLAQN 251
Score = 72 (30.4 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 27/125 (21%), Positives = 52/125 (41%)
Query: 146 LNLTHNNITSLLDYN--FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
L L N I S+L+ FK + NL+++ L NKI+ + F + ++ L L N++
Sbjct: 353 LRLNDNEI-SVLEATGVFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLET 411
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
+ R N I ++ + F + ++ + I P ++ L L
Sbjct: 412 VHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSL 471
Query: 264 IYLDL 268
++L
Sbjct: 472 STINL 476
Score = 71 (30.1 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 26/131 (19%), Positives = 58/131 (44%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQX 372
L L N ++ + T F L NL ++++S NK+ + +FD S+++L ++GN ++
Sbjct: 353 LRLNDNEISVLEATGVFKKLPNLRKINLSNNKIKEVREGAFDGAA-SVQELMLTGNQLET 411
Query: 373 XXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIK 432
+++ + + F ++ L+L N + I + + +
Sbjct: 412 VHGRMFRGLSGLKTLMLRSNL-ISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVS 470
Query: 433 LTHLDLSRNKF 443
L+ ++L N F
Sbjct: 471 LSTINLLSNPF 481
Score = 67 (28.6 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 24/92 (26%), Positives = 33/92 (35%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P SI L +DL N N I SF+ L+V
Sbjct: 585 PRELSIFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRV 644
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V +F +LT+L L + N L
Sbjct: 645 LTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 676
Score = 64 (27.6 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N ++ +FS+ L L L NRL + +F L +L L + N + + SF+
Sbjct: 602 NSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGNDISSVPEGSFN 661
Query: 355 PIENSLRDLKISGN 368
+ SL L + N
Sbjct: 662 DL-TSLSHLALGTN 674
Score = 64 (27.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 25/104 (24%), Positives = 43/104 (41%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
+D S KL R V S P + DL+++ N I +++ +
Sbjct: 332 VDCSNQKLAR--VPSHLP--EYVTDLRLNDNEISVLEATGVFKKLPNLRKINLSNNKIKE 387
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ +G F +Q L L+GN L+ +H +++ L L L N
Sbjct: 388 VREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSN 431
Score = 61 (26.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
G+FK P+L+ +NLS N ++++ + + L L+ N+ +
Sbjct: 367 GVFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLE 410
Score = 59 (25.8 bits), Expect = 7.1e-08, Sum P(3) = 7.1e-08
Identities = 21/112 (18%), Positives = 42/112 (37%)
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+FK + L+ + ++ + + A + L L NQ
Sbjct: 368 VFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLM 427
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N + +F +++L L NR++ +T AFT L +L +++ N
Sbjct: 428 LRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSN 479
Score = 56 (24.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 16/75 (21%), Positives = 34/75 (45%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + F L+ L L+ N ++ V+ F L+++ L + N++ + +F
Sbjct: 406 GNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAF 465
Query: 354 DPIENSLRDLKISGN 368
+ SL + + N
Sbjct: 466 TTLV-SLSTINLLSN 479
Score = 54 (24.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 26/120 (21%), Positives = 47/120 (39%)
Query: 300 ILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+LE + F L+ + L N++ +V AF ++ EL ++ N+L+ + F +
Sbjct: 362 VLEATGVFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGL- 420
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
+ L+ L + N I + D + I G F L +NL N
Sbjct: 421 SGLKTLMLRSNLISCVSNDTFVGLSSVRLLS-LYDNRISTITPGAFTTLVSLSTINLLSN 479
Score = 53 (23.7 bits), Expect = 6.7e-12, Sum P(3) = 6.7e-12
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KLK +D+S N I +I + F+ ++ T L
Sbjct: 146 KLKRIDISKNQISDIAADAFQGLKSLTSL 174
Score = 53 (23.7 bits), Expect = 7.1e-08, Sum P(3) = 7.1e-08
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 396 TDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
T +P+ L + HL ++LS N++ + N + + L+ L LS N+ +
Sbjct: 582 TAVPREL-SIFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLR 629
Score = 45 (20.9 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L L GN++ + + L+HL L N
Sbjct: 631 IPIHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 674
Score = 42 (19.8 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 148 LTHNNITSLLDYNFKGMMNLQELYLDFNKI 177
L +NNI+ +L +F M ++ L L N +
Sbjct: 2 LNNNNISRILVTSFNHMPKIRTLRLHSNHL 31
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 194 (73.4 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 99/412 (24%), Positives = 158/412 (38%)
Query: 51 SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIG 110
+A +C C C D R + C G +P G + T+ L I + N++T
Sbjct: 24 AAPPLCAAPCSCDGDRR----VDCS-GKGLTAVPEG-LSAFTQALDI-----SMNNITQL 72
Query: 111 P--IFQQFQHLEELHITNSFIPAIGFHP--FWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
P F+ F LEEL + + + I HP G+ L+ L L +N + ++ +G+
Sbjct: 73 PEDAFKNFPFLEELQLAGNDLSFI--HPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSA 130
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
LQ L LD N I S+P F L LR L L N ++++ N I
Sbjct: 131 LQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKIS 190
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
I F ++ L + + +++ + L +L LDL YN
Sbjct: 191 SIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSL 250
Query: 287 XXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
N VI + +F L+ + L N L+ V +AF NL++L L I +
Sbjct: 251 KELGFHS-NSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASM- 308
Query: 347 RLEVASFDPIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK 404
V F + + L L ++G I ++ N D+P F
Sbjct: 309 ---VQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLD-LSYNNIRDLPS--FN 362
Query: 405 MNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEP 456
L+ ++L N + I +Q I L LDLSRN +++ P
Sbjct: 363 GCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGP 414
Score = 168 (64.2 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 72/333 (21%), Positives = 132/333 (39%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
+ L+ L + N+ + + G+ +L+ L L N+ITS+ + +F+G++ L+ L+LD N
Sbjct: 105 KELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNS 164
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ +P +L L+ L+LA N+IS + N I ++ F +
Sbjct: 165 LTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGL 224
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L+T L P L L L N N
Sbjct: 225 DNLETLDLNYNNLGEF-PQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNP 283
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELD---ISYNKLDRLEVASF 353
+ +F + L L ++ + + F NLT + L+ ++ K+ + +
Sbjct: 284 LSFVGNSAFHNLSDLHSLVIRGASMVQ----QFPNLTGTVHLESLTLTGTKISSIP-NNL 338
Query: 354 DPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLN 413
+ LR L +S NNI+ + Y I +G F+ L+ L+
Sbjct: 339 CQEQKMLRTLDLSYNNIRDLPSFNGCHALEEISLQR--NQIY-QIKEGTFQGLISLRILD 395
Query: 414 LSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
LS N + +IH+ + + +T+LD+S N+ F
Sbjct: 396 LSRNLIHEIHSRAFATLGPITNLDVSFNELTSF 428
Score = 140 (54.3 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 59/254 (23%), Positives = 105/254 (41%)
Query: 12 KSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYE 71
++LD+S N+I ++ + FK+ F L L + S + P AL +
Sbjct: 60 QALDISMNNITQLPEDAFKN-------FPFLEELQLAGNDLSFIHPK----ALSGLKELK 108
Query: 72 IVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQHLEELHITNSFI 129
++ + + +P + G L+ + + N H+T P F+ L L + ++ +
Sbjct: 109 VLTLQNNQLKTVP-SEAIRGLSALQSLRLDAN--HITSVPEDSFEGLVQLRHLWLDDNSL 165
Query: 130 PAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLS 189
+ HP +P+L+ L L N I+S+ D+ F + +L L+L NKI S+ F L
Sbjct: 166 TEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLD 225
Query: 190 DLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGL 249
+L L L +N + + P+ N I I F L+T L
Sbjct: 226 NLETLDLNYNNLGEF-PQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPL 284
Query: 250 ENINPMMYSILADL 263
+ + L+DL
Sbjct: 285 SFVGNSAFHNLSDL 298
Score = 125 (49.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 36/123 (29%), Positives = 56/123 (45%)
Query: 118 HLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKI 177
HLE L +T + I +I + LR L+L++NNI L +N G L+E+ L N+I
Sbjct: 320 HLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPSFN--GCHALEEISLQRNQI 377
Query: 178 ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQ 237
I F L LR+L L+ N I ++ R +N++ E +
Sbjct: 378 YQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLN 437
Query: 238 ELK 240
+LK
Sbjct: 438 QLK 440
Score = 93 (37.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N I E +F L++L L RN + ++ + AF L + LD+S+N E+ SF
Sbjct: 375 NQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFN-----ELTSF- 428
Query: 355 PIE--NSLRDLKISGN 368
P E N L LK+ GN
Sbjct: 429 PTEGLNGLNQLKLVGN 444
Score = 45 (20.9 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFK 30
+ L++LDL+YN++ E P+ K
Sbjct: 224 LDNLETLDLNYNNLGEF-PQAIK 245
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 194 (73.4 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 95/366 (25%), Positives = 148/366 (40%)
Query: 12 KSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYE 71
+SL+LSYN + EI+ F+D+ T L +V YL +S+ P + ++ G
Sbjct: 73 RSLNLSYNRLSEIDSAAFEDL---TNLQEV----YL-NSNELTAIPSLGAASI---GVVS 121
Query: 72 IVCRRGDMANPIPIGQMD--LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFI 129
+ + + + + Q+ L EVL + S N + F + EL++ ++ I
Sbjct: 122 LFLQHNKILS-VDGSQLKSYLSLEVLDL--SSNNITEIR-SSCFPNGLRIRELNLASNRI 177
Query: 130 PAIGFHPFWGVP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
+ F G+ SL L L+ N IT L FK + L +L L+ N+I I F L
Sbjct: 178 SILESGAFDGLSRSLLTLRLSKNRITQLPVKAFK-LPRLTQLDLNRNRIRLIEGLTFQGL 236
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG 248
L VL L N IS+L YN +VE+N + L +
Sbjct: 237 DSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNS 296
Query: 249 LENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
+ I +S L L L +N N I E +F
Sbjct: 297 ISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGL 356
Query: 309 FKLQVLCLKRNRLAKV---TTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKI 365
L+VL L N ++ T+ AFT L NL +L + NK+ + +F +E SL L +
Sbjct: 357 KSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLE-SLEHLNL 415
Query: 366 SGNNIQ 371
N I+
Sbjct: 416 GENAIR 421
Score = 175 (66.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 58/241 (24%), Positives = 98/241 (40%)
Query: 105 NHLTIGPIFQ-QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
N +T P+ + L +L + + I I F G+ SL L L NNI+ L D F G
Sbjct: 200 NRITQLPVKAFKLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWG 259
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
+ + L+L++N + + S L+ L L L++N IS++ +N
Sbjct: 260 LSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFN 319
Query: 224 DIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXX 283
++ ++ E ++ L + + +I + L L LDL +N+
Sbjct: 320 NLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGA 379
Query: 284 XXXX---XXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340
GN + +++FS L+ L L N + V AF + NL EL I
Sbjct: 380 FTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQFDAFAKMKNLKELYI 439
Query: 341 S 341
S
Sbjct: 440 S 440
Score = 171 (65.3 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 89/379 (23%), Positives = 154/379 (40%)
Query: 140 VPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL-- 196
+PS R LNL++N ++ + F+ + NLQE+YL+ N++ +IPS + + + V+SL
Sbjct: 68 LPSWTRSLNLSYNRLSEIDSAAFEDLTNLQEVYLNSNELTAIPS---LGAASIGVVSLFL 124
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
HN+I + N+I EI F + ++ S + +
Sbjct: 125 QHNKILSVDGSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILESGA 184
Query: 257 YSILA-DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
+ L+ L+ L L N+ N +I +F L+VL
Sbjct: 185 FDGLSRSLLTLRLSKNRITQLPVKAFKLPRLTQLDLNR-NRIRLIEGLTFQGLDSLEVLR 243
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L+RN ++++T AF L+ + L + YN L + S + +L L +S N+I
Sbjct: 244 LQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGL-TALHQLHLSNNSISRIQR 302
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
++ N T + + L L LS N + I ++ L
Sbjct: 303 DGWSFCQKLHELI-LSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRV 361
Query: 436 LDLSRNK-----------FKGFDEKSYIMSEPKNIHKAAKNSFA-LQS----SMGKNAEY 479
LDL N+ F G D S + I AK +F+ L+S ++G+NA
Sbjct: 362 LDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIR 421
Query: 480 AV-FIASSSISYLLEALLT 497
+V F A + + L E ++
Sbjct: 422 SVQFDAFAKMKNLKELYIS 440
Score = 159 (61.0 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 80/346 (23%), Positives = 133/346 (38%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNL--THNNITSLLDYNFKGMMNLQEL 170
F+ +L+E+++ ++ + AI P G S+ ++L HN I S+ K ++L+ L
Sbjct: 90 FEDLTNLQEVYLNSNELTAI---PSLGAASIGVVSLFLQHNKILSVDGSQLKSYLSLEVL 146
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL-APRXXXXXXXXXXXXXXYNDIVEIN 229
L N I I SS F + +R L+LA NRIS L + N I ++
Sbjct: 147 DLSSNNITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLP 206
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
+ FK + L + I + + L L L L N
Sbjct: 207 VKAFK-LPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHV 265
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
N + S L L L N ++++ ++ L EL +S+N L RL+
Sbjct: 266 LHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTRLD 325
Query: 350 VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIP------KGLF 403
S + +SL L++S N I + D+++ +I G F
Sbjct: 326 EESLAEL-SSLSILRLSHNAISHIAEGAFKGLKSLR----VLDLDHNEISGTIEDTSGAF 380
Query: 404 KMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKG--FD 447
+L L L GN ++ + + L HL+L N + FD
Sbjct: 381 TGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQFD 426
>ZFIN|ZDB-GENE-041111-75 [details] [associations]
symbol:lrig2 "leucine-rich repeats and
immunoglobulin-like domains 2" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041111-75 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 EMBL:CR391948 IPI:IPI00901536
Ensembl:ENSDART00000112700 Uniprot:E7F013
Length = 1044
Score = 193 (73.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 92/400 (23%), Positives = 155/400 (38%)
Query: 43 IFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEE 102
+FL ++ CP C C+ + C R + ++ V +
Sbjct: 11 LFLLIVSVVGLDTCPSPCSCSGGPGAAQLLDCNR----KRLTAAALEAPAWVTH---ASI 63
Query: 103 NPNHLTIGPIF-QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF 161
N N LT P ++ L + ++ I + SL L+L+ N+I+ L +F
Sbjct: 64 NQNELTAVPFLGDASSNITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSF 123
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
M L+ L L NKI S+ F ++S L VL + NR+S L P
Sbjct: 124 PPMQ-LKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRLS-LLPDKVFTLSQLQVLELR 181
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
N I + IFK+++ LK+ K + G+ + L ++ L+L YN
Sbjct: 182 RNRIRVVESLIFKELKALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLTELNKGWL 241
Query: 282 XXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
N+ +I ++ +L+ L L N L+++ F L+ L L++
Sbjct: 242 YGLHMLRILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLG 301
Query: 342 YNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMN--YTDIP 399
N++ L F + N +R L I N I + N I
Sbjct: 302 DNQISHLGEGVFSSLAN-VRTLDIRNNEISLAIEDFIGMFVGLKRLNSLVLQNNKIRTIT 360
Query: 400 KGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLS 439
K F+ L+ L+LS N + IH + +++KL LDL+
Sbjct: 361 KRAFEGLMELENLDLSKNGIMSIHPDAF-THLKLKTLDLN 399
Score = 144 (55.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 53/248 (21%), Positives = 103/248 (41%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N L++ P +F Q L+ L + + I + F + +L+ L + N IT L+D
Sbjct: 158 NQNRLSLLPDKVFTLSQ-LQVLELRRNRIRVVESLIFKELKALKSLKMQRNGITKLMDGA 216
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
G+ N++EL L++N + + L LR+L + N I +
Sbjct: 217 LFGLENMEELELEYNNLTELNKGWLYGLHMLRILRVNQNNIGLIRADAWEFCHRLEELDL 276
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXX 280
+N + + +F + L++ + ++ ++S LA++ LD+ N+
Sbjct: 277 SFNHLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNNEISLAIEDF 336
Query: 281 XXXXXXXXXXXXX---GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIE 337
N I +++F +L+ L L +N + + AFT+L L
Sbjct: 337 IGMFVGLKRLNSLVLQNNKIRTITKRAFEGLMELENLDLSKNGIMSIHPDAFTHL-KLKT 395
Query: 338 LDISYNKL 345
LD++ + L
Sbjct: 396 LDLNSSSL 403
Score = 139 (54.0 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 65/310 (20%), Positives = 119/310 (38%)
Query: 136 PFWGVPS--LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRV 193
PF G S + L+L HN I+ ++ +L+ L L N I + + F + L+
Sbjct: 72 PFLGDASSNITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSFPPMQ-LKY 130
Query: 194 LSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENIN 253
L+L+ N+IS L P N + + ++F + +L+ + R + +
Sbjct: 131 LNLSKNKISSLEPGCFGNISSLLVLKINQNRLSLLPDKVFT-LSQLQVLELRRNRIRVVE 189
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
+++ L L L + N N+ + + L++
Sbjct: 190 SLIFKELKALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLTELNKGWLYGLHMLRI 249
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXX 373
L + +N + + A+ L ELD+S+N L RLE F + + L+ L + N I
Sbjct: 250 LRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGL-SLLQSLNLGDNQISHL 308
Query: 374 XXXXXXXXXXXXXXXXIADMNYTDIPK--GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNI 431
+ I G+F L L L N ++ I ++ +
Sbjct: 309 GEGVFSSLANVRTLDIRNNEISLAIEDFIGMFVGLKRLNSLVLQNNKIRTITKRAFEGLM 368
Query: 432 KLTHLDLSRN 441
+L +LDLS+N
Sbjct: 369 ELENLDLSKN 378
Score = 134 (52.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 55/254 (21%), Positives = 97/254 (38%)
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG 248
S++ VLSL HNRIS++ N I E+ F +Q LK
Sbjct: 79 SNITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSFPPMQ-LKYLNLSKNK 137
Query: 249 LENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
+ ++ P + ++ L+ L + N+ N V+ F
Sbjct: 138 ISSLEPGCFGNISSLLVLKINQNRLSLLPDKVFTLSQLQVLELRR-NRIRVVESLIFKEL 196
Query: 309 FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+ L ++RN + K+ A L N+ EL++ YN L L + + LR L+++ N
Sbjct: 197 KALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLTELNKGWLYGL-HMLRILRVNQN 255
Query: 369 NIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQ 428
NI ++ + + + +F LQ LNL N + + ++
Sbjct: 256 NI-GLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGVFS 314
Query: 429 SNIKLTHLDLSRNK 442
S + LD+ N+
Sbjct: 315 SLANVRTLDIRNNE 328
Score = 50 (22.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 5 LIFMSKLKSLDLSYNDIVEINPEIFKDIQ 33
L+ S L+SLDLS N I E+ F +Q
Sbjct: 99 LLPYSSLESLDLSSNSISELKAGSFPPMQ 127
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 192 (72.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 87/355 (24%), Positives = 140/355 (39%)
Query: 105 NHLTIGP--IFQQFQHLEELHITNSFIPAIGFHP--FWGVPSLRYLNLTHNNITSLLDYN 160
N++T P F+ F LEEL + + + I HP G+ L+ L L +N + ++
Sbjct: 21 NNITQLPEDAFKNFPFLEELRLAGNDLSFI--HPKALSGLKELKVLTLQNNQLKTVPSEA 78
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
+G+ LQ L LD N I S+P F L+ LR L L N + ++
Sbjct: 79 IRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQALTL 138
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXX 280
N I I F ++ L + ++N+ + L +L LDL YN
Sbjct: 139 ALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNLGEFPQAI 198
Query: 281 XXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340
N VI + +F L+ + L N L+ V +AF NL++L L I
Sbjct: 199 KALPSLKELLFHS-NSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVI 257
Query: 341 SYNKLDRLEVASFDPIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDI 398
+ V F + + L L ++G I D++Y I
Sbjct: 258 RGASM----VQQFPNLTGTVHLESLTLTGTKISSISSNLCQEQKMLRTL----DLSYNSI 309
Query: 399 PKGLFKMNP-H-LQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
K L + H L+ ++L N + I +Q + L LDLSRN+ +++
Sbjct: 310 -KDLPSFDGCHALEEISLQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAF 363
Score = 171 (65.3 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 71/333 (21%), Positives = 129/333 (38%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
+ L+ L + N+ + + G+ +L+ L L N+ITS+ + +F+G+ L+ L+LD N
Sbjct: 59 KELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNS 118
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ +P +L L+ L+LA N+IS + N I + F +
Sbjct: 119 LMEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGL 178
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L+T L P L L L N N
Sbjct: 179 DNLETLDLNYNNLGEF-PQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNP 237
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELD---ISYNKLDRLEVASF 353
+ +F + L L ++ + + F NLT + L+ ++ K+ + ++
Sbjct: 238 LSFVGNSAFHNLSDLHSLVIRGASMVQ----QFPNLTGTVHLESLTLTGTKISSIS-SNL 292
Query: 354 DPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLN 413
+ LR L +S N+I+ + I +G F+ L+ L+
Sbjct: 293 CQEQKMLRTLDLSYNSIKDLPSFDGCHALEEIS---LQRNQIHQIKEGTFQGLVSLRILD 349
Query: 414 LSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
LS N + +IHN + +T+LD+S N+ F
Sbjct: 350 LSRNQIHEIHNRAFAKLGSITNLDISFNELTSF 382
Score = 165 (63.1 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 66/258 (25%), Positives = 103/258 (39%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F L LH+ N+ I +G H F G+ +L L+L +NN+ K + +L+EL
Sbjct: 151 FTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNLGEF-PQAIKALPSLKELLF 209
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N I IP F LR + L N +S + +V+ P +
Sbjct: 210 HSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNL 269
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
+ L++ + +I+ + L LDL YN
Sbjct: 270 TGTVH-LESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDLPSFDGCHALEEISLQR 328
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N I E +F L++L L RN++ ++ AF L ++ LDIS+N E+ S
Sbjct: 329 --NQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFN-----ELTS 381
Query: 353 FDPIE--NSLRDLKISGN 368
F P E + L LK+ GN
Sbjct: 382 F-PTEGLSGLNQLKLVGN 398
Score = 150 (57.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 63/280 (22%), Positives = 108/280 (38%)
Query: 91 GTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTH 150
G + LK++ + N + L+ L + + I ++ F G+ LR+L L
Sbjct: 57 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDD 116
Query: 151 NNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXX 210
N++ + + + LQ L L NKI SIP F +LS L VL L +N+I L
Sbjct: 117 NSLMEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFD 176
Query: 211 XXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGY 270
YN++ E P+ K + LK S + I + L + L
Sbjct: 177 GLDNLETLDLNYNNLGEF-PQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYD 235
Query: 271 NQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFT 330
N G V + + L+ L L +++ +++
Sbjct: 236 NPLSFVGNSAFHNLSDLHSLVIRGASM-VQQFPNLTGTVHLESLTLTGTKISSISSNLCQ 294
Query: 331 NLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
L LD+SYN + ++ SFD ++L ++ + N I
Sbjct: 295 EQKMLRTLDLSYNSIK--DLPSFDGC-HALEEISLQRNQI 331
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 74/334 (22%), Positives = 118/334 (35%)
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
+P+LR +++ NNIT L + FK L+EL L N + I L +L+VL+L +N
Sbjct: 12 LPALRDISM--NNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNN 69
Query: 200 RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSI 259
++ + N I + + F+ + +L+ L + S
Sbjct: 70 QLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSN 129
Query: 260 LADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRN 319
L L L L N+ N + + F L+ L L N
Sbjct: 130 LPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYN 189
Query: 320 RLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXX 379
L + A L +L EL N + + +FD LR + + N +
Sbjct: 190 NLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDG-NPLLRTIHLYDNPLSFVGNSAFH 247
Query: 380 XXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLS 439
P HL+ L L+G + I + L Q L LDLS
Sbjct: 248 NLSDLHSLVIRGASMVQQFPN--LTGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLS 305
Query: 440 RNKFK---GFDEKSYI--MSEPKN-IHKAAKNSF 467
N K FD + +S +N IH+ + +F
Sbjct: 306 YNSIKDLPSFDGCHALEEISLQRNQIHQIKEGTF 339
Score = 129 (50.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 63/241 (26%), Positives = 106/241 (43%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDR 67
+ L++LDL+YN++ E P+ K + L L HS++ + P + A D
Sbjct: 178 LDNLETLDLNYNNLGEF-PQAIKALPSLKEL--------LFHSNSISVIP---DGAFDGN 225
Query: 68 GRYEIVCRRGDMANPIP-IGQM------DLGTEVLKIVPS-EENPNHLTIGPIFQQFQHL 119
+ D NP+ +G DL + V++ ++ PN LT G + HL
Sbjct: 226 PLLRTI-HLYD--NPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPN-LT-GTV-----HL 275
Query: 120 EELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES 179
E L +T + I +I + LR L+L++N+I L +F G L+E+ L N+I
Sbjct: 276 ESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDLP--SFDGCHALEEISLQRNQIHQ 333
Query: 180 IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQEL 239
I F L LR+L L+ N+I ++ R +N++ E + +L
Sbjct: 334 IKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFNELTSFPTEGLSGLNQL 393
Query: 240 K 240
K
Sbjct: 394 K 394
Score = 37 (18.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ ND+ I+P+ +++ +L
Sbjct: 37 LEELRLAGNDLSFIHPKALSGLKELKVL 64
>RGD|1307733 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein coupled
receptor 5" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS50262
PROSITE:PS51450 RGD:1307733 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH473960
GeneTree:ENSGT00650000092962 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B IPI:IPI00360187 RefSeq:NP_001100254.1
UniGene:Rn.214063 Ensembl:ENSRNOT00000005814 GeneID:299802
KEGG:rno:299802 UCSC:RGD:1307733 NextBio:645794 Uniprot:D4AC13
Length = 907
Score = 191 (72.3 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 88/393 (22%), Positives = 149/393 (37%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMA-NPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQ 114
CP C C LD R + C D+ + +P + + T L + S N + L +
Sbjct: 34 CPSYCHCELDGRMLLRVDC--SDLGLSELP-SNLSVFTSYLDL--SMNNISQLPAS-LLH 87
Query: 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
+ + LEEL + + + I F G+ SL+ L L +N + + + + + +LQ L LD
Sbjct: 88 RLRFLEELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDA 147
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
N I +P S F L LR L L N ++ + + N I I F
Sbjct: 148 NHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADHAFG 207
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
++ L + + ++ + L L LDL YN
Sbjct: 208 NLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIKTLSNLKELGFHS- 266
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N+ I E++F L + N + V +AF +L L L ++ ++ F
Sbjct: 267 NNIRSIPERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLN----GASQITEFP 322
Query: 355 PIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT---DIPKGLFKMNPHL 409
+ + L L ++G I + D++Y D+P L
Sbjct: 323 DLTGTATLESLTLTGAKISSLPQTVCDQLPNLQ----VLDLSYNLLEDLPS--LSGCQKL 376
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
Q ++L N + +I +Q L L+L+RNK
Sbjct: 377 QKIDLRHNEIYEIKGGTFQQLFNLRSLNLARNK 409
Score = 157 (60.3 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/269 (26%), Positives = 104/269 (38%)
Query: 103 NPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N H F L LH+ N+ I ++G F G+ SL L+L +NN+ K
Sbjct: 196 NKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEF-PTAIK 254
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
+ NL+EL N I SIP F+ L + N I +
Sbjct: 255 TLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVG--ISAFQHLPELRTLTL 312
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSI---LADLIYLDLGYNQXXXXXXX 279
N +I F D+ T + + I+ + ++ L +L LDL YN
Sbjct: 313 NGASQITE--FPDLTGTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYNLLEDLPSL 370
Query: 280 XXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELD 339
N I +F F L+ L L RN++A + AF+ L +LI+LD
Sbjct: 371 SGCQKLQKIDLRH--NEIYEIKGGTFQQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLD 428
Query: 340 ISYNKLDRLEVASFDPIENSLRDLKISGN 368
+S N L V + L LK++GN
Sbjct: 429 LSSNLLSSFPVTGL----HGLTHLKLTGN 453
>ZFIN|ZDB-GENE-040220-5 [details] [associations]
symbol:tlr22 "toll-like receptor 22" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-5 GO:GO:0016021 GO:GO:0007165 GO:GO:0009617
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 InterPro:IPR025875 Pfam:PF12799 GO:GO:0052033
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200 EMBL:BC163527
IPI:IPI00898178 RefSeq:NP_001122147.1 UniGene:Dr.30190
ProteinModelPortal:B3DJL6 STRING:B3DJL6 GeneID:403135
KEGG:dre:403135 CTD:403135 HOVERGEN:HBG055859 NextBio:20816896
Uniprot:B3DJL6
Length = 947
Score = 191 (72.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 84/341 (24%), Positives = 133/341 (39%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L L + + I + H F L L+L N I++L F+G L++L L NK+
Sbjct: 307 LRVLRLIATKIKHLTNHMFDPCSELSELDLGGNEISNLSQSMFRGFKQLKKLQLQINKLT 366
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
+ +S F L+ L + L+ N I KL+ N I I +FKD++
Sbjct: 367 RVTNS-FQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKDLKS 425
Query: 239 LKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFP 298
L+ + + L I+ + + L L L YN+ N
Sbjct: 426 LEVLRLGTNNLLKIDDVFSNGPYFLKELQLSYNKLSLIKSHTFGNLPQLNNLSLEDNQIS 485
Query: 299 VILEKSFSSQFKLQVLCLKRNRLA-KVTTT---AFTNLTNLIELDISYNKL----DRLEV 350
I +F L L L N++ K TT F+ + NL LD+ N + D+L+
Sbjct: 486 EIEGYAFGGLENLTSLFLSSNKITGKTLTTHPNVFSGMPNLQNLDLFANSISFAYDKLKY 545
Query: 351 ASFDPIENSLRDLKI-SGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
F ++N LR+L + S I + N + LF P L
Sbjct: 546 PLFKDLKN-LRELSLYSQRRGIGQLPSNLLEGLSSLQMFYIGNTNLNQLNPNLFNFTPQL 604
Query: 410 QFLNLSGNNLQD---IHNLLYQSNIKLTHLDLSRNKFKGFD 447
FL+LS N L++ I L+ LT L +SR + + +
Sbjct: 605 WFLDLSKNALREDDAIPPELFHPIPNLTKLIISRTQLRSLN 645
Score = 159 (61.0 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 70/317 (22%), Positives = 123/317 (38%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNR 200
P LR L L I L ++ F L EL L N+I ++ S+F L+ L L N+
Sbjct: 305 PMLRVLRLIATKIKHLTNHMFDPCSELSELDLGGNEISNLSQSMFRGFKQLKKLQLQINK 364
Query: 201 ISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSIL 260
++++ N I +++ F ++ ++KT S + +I ++ L
Sbjct: 365 LTRVT-NSFQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKDL 423
Query: 261 ADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNR 320
L L LG N N +I +F + +L L L+ N+
Sbjct: 424 KSLEVLRLGTNNLLKIDDVFSNGPYFLKELQLSYNKLSLIKSHTFGNLPQLNNLSLEDNQ 483
Query: 321 LAKVTTTAFTNLTNLIELDISYNKLDRLEVAS----FDPIENSLRDLKISGNNIQXXXXX 376
++++ AF L NL L +S NK+ + + F + N L++L + N+I
Sbjct: 484 ISEIEGYAFGGLENLTSLFLSSNKITGKTLTTHPNVFSGMPN-LQNLDLFANSISFAYDK 542
Query: 377 XXXXXXXXXXXXXIADMNYTD------IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSN 430
+ Y+ +P L + LQ + NL ++ L+
Sbjct: 543 LKYPLFKDLKNLRELSL-YSQRRGIGQLPSNLLEGLSSLQMFYIGNTNLNQLNPNLFNFT 601
Query: 431 IKLTHLDLSRNKFKGFD 447
+L LDLS+N + D
Sbjct: 602 PQLWFLDLSKNALREDD 618
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 90/390 (23%), Positives = 154/390 (39%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F+ F+ L++L + + + + + F + SL +++L+ N+I L +F + ++ LY
Sbjct: 348 MFRGFKQLKKLQLQINKLTRVT-NSFQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLY 406
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L NKI SI S +F L L VL L N + K+ YN + I
Sbjct: 407 LYSNKISSIRSCLFKDLKSLEVLRLGTNNLLKIDDVFSNGPYFLKELQLSYNKLSLIKSH 466
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F ++ +L + I + L +L L L N+
Sbjct: 467 TFGNLPQLNNLSLEDNQISEIEGYAFGGLENLTSLFLSSNKITGKTLTT----------- 515
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLA----KVTTTAFTNLTNLIELDISYNKLDR 347
H P + FS LQ L L N ++ K+ F +L NL EL + Y++
Sbjct: 516 ----H-PNV----FSGMPNLQNLDLFANSISFAYDKLKYPLFKDLKNLRELSL-YSQRRG 565
Query: 348 LEVASFDPIE--NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD--IPKGLF 403
+ + +E +SL+ I N+ + D IP LF
Sbjct: 566 IGQLPSNLLEGLSSLQMFYIGNTNLNQLNPNLFNFTPQLWFLDLSKNALREDDAIPPELF 625
Query: 404 KMNPHLQFLNLSGNNLQDIHNLLYQSNI-KLTHLDLSRNKFKGFDEKSYIMSEPK-NIHK 461
P+L L +S L+ + N L +N+ KL+ L S N+ +E + I S P+ +
Sbjct: 626 HPIPNLTKLIISRTQLRSL-NFLLGANLNKLSTLRASGNEIDSVNE-TLIKSLPRLAVLD 683
Query: 462 AAKNSFALQSSMGKNAEYAVFIASSSISYL 491
N+F + ++A S+ + YL
Sbjct: 684 LQNNTFTCDCNNAFFIDWAKKNESTQVYYL 713
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 188 (71.2 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 65/266 (24%), Positives = 112/266 (42%)
Query: 105 NHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NHL P F L +L++ + + I F + +L+ L L N +T + F
Sbjct: 159 NHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFD 218
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
G++NLQEL L N+I + +F + +L+ L L++N IS+L P
Sbjct: 219 GLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFG 278
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N + E++P IF + L+ + ++ ++S L L L L NQ
Sbjct: 279 NSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFN 338
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + F LQ + L+ NRL ++ F N+ L+ + +
Sbjct: 339 GLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQN 398
Query: 343 NKLDRLEVASFDPIENSLRDLKISGN 368
N+L+ L + FD + L +L++ N
Sbjct: 399 NQLENLPLGIFDHL-GKLCELRLYDN 423
Score = 186 (70.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 70/323 (21%), Positives = 125/323 (38%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L I N+ I + PF + +L L + N ++ + F+ + +L+ L L NK++ +P
Sbjct: 58 LQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLP 117
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
+F L L L L+ N++ ++ P N + I F + L
Sbjct: 118 IGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTK 177
Query: 242 FKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVIL 301
L +I+P ++ L +L L L N+ N ++
Sbjct: 178 LNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLS 237
Query: 302 EKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
F + LQ L L N ++++ + F L L L + N L L F P+ N LR
Sbjct: 238 PGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPN-LR 296
Query: 362 DLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQD 421
+L + N+I ++ + I G F L+ L+L N LQD
Sbjct: 297 ELWLYDNHISSLPDNVFSNLRQLQVLI-LSRNQISFISPGAFNGLTELRELSLHTNALQD 355
Query: 422 IHNLLYQSNIKLTHLDLSRNKFK 444
+ +++ L ++ L N+ +
Sbjct: 356 LDGNVFRMLANLQNISLQNNRLR 378
Score = 182 (69.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 70/290 (24%), Positives = 119/290 (41%)
Query: 83 IPIGQMDLGTEVLKIVPSEENPNHLTIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVP 141
+PIG G + L+ + N L I P F Q +L+EL + + + I F +
Sbjct: 116 LPIGLFQ-GLDSLESLLLSSN-QLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLV 173
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
L LNL N++T + F+ + NLQ L L N++ IP F L +L+ L+L N+I
Sbjct: 174 GLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQI 233
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
L+P N I ++ P +F + +L L+ ++P ++ +
Sbjct: 234 GLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMP 293
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L L L N N I +F+ +L+ L L N L
Sbjct: 294 NLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNAL 353
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
+ F L NL + + N+L +L F + N L +++ N ++
Sbjct: 354 QDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANV-NGLMAIQLQNNQLE 402
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 62/277 (22%), Positives = 105/277 (37%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N L + I + S F+++S L L + N +S++ P N +
Sbjct: 54 NAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKL 113
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ +F+ + L++ S L I P +S ++L L L N
Sbjct: 114 QVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLV 173
Query: 286 XXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
N I + F LQVL L NRL + F L NL EL + N++
Sbjct: 174 GLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQI 233
Query: 346 DRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKM 405
L F N L+ L +S N+I + + ++ G+F
Sbjct: 234 GLLSPGLFHNNHN-LQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGN-SLKELSPGIFGP 291
Query: 406 NPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
P+L+ L L N++ + + ++ + +L L LSRN+
Sbjct: 292 MPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQ 328
>ZFIN|ZDB-GENE-080327-8 [details] [associations]
symbol:lrrtm2 "leucine rich repeat transmembrane
neuronal 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-8 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CR381529 EMBL:CU681852
IPI:IPI00866135 Ensembl:ENSDART00000105477
Ensembl:ENSDART00000130532 Uniprot:F1Q8H9
Length = 543
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 59/225 (26%), Positives = 95/225 (42%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L HN+I+ L F G L L+LD N+I ++ F L L+ L+L+ NRI+KL
Sbjct: 67 LSLRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLP 126
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
+N + + PE+F +++L+ RS L + L Y
Sbjct: 127 NTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEY 186
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
L L N+ NH I F LQ L L+ N++ +T
Sbjct: 187 LGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNKINNLT 246
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
+T T L +LD++ N++ L F+ + SL+ L + N +
Sbjct: 247 STMEWKWTTLEKLDLTGNEIRVLIPEVFETLP-SLKILLLDNNKL 290
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 71/303 (23%), Positives = 119/303 (39%)
Query: 41 VTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPS 100
V L L + CP C C +D Y C + P P G +D G L +
Sbjct: 20 VISMLLCLPPVSCTTCPQKCRC--EDLQFY---CDTQGLLAP-PDG-VDKGALGLSL--R 70
Query: 101 EENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
+ + L+ F F L LH+ ++ I + F G+ L+ LNL+ N IT L +
Sbjct: 71 HNSISELSSDQFFG-FTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTT 129
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
F ++NLQ L L FN++ ++ +F L L++L L N + R
Sbjct: 130 FIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGL 189
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXX 280
N + + F + +L+ L IN + L L +L L +N+
Sbjct: 190 SNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNKINNLTSTM 249
Query: 281 XXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340
GN V++ + F + L++L L N+L+ + + +L + +
Sbjct: 250 EWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLSNLDSQTMDMWKSLNVIGL 309
Query: 341 SYN 343
S N
Sbjct: 310 SSN 312
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 190 (71.9 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 98/432 (22%), Positives = 174/432 (40%)
Query: 47 LLHSSASVMCPYMCECALD--DRGRYEIVCRRGDMANPIP--IGQMDLGTEVLKIVPSEE 102
LL A CP C C D D R +V + +P+P + ++DL L + +
Sbjct: 38 LLDDDAQRPCPAACHCLGDLLDCSRRRLV----RLPDPLPAWVTRLDLSHNRLSFIQTS- 92
Query: 103 NPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPS--LRYLNLTHNNITSLLDYN 160
+ +HL Q L+E+ + N+ + I P G S +R L+L N I +L
Sbjct: 93 SLSHL---------QSLQEVKLNNNELETI---PNLGSISANIRQLSLAGNAIDKILPEQ 140
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
+ +L+ L L N I + ++ F L L+ L + +NR+S + P
Sbjct: 141 LEAFQSLETLDLSNNNISELRTA-FPPLQ-LKYLYINNNRVSSMEPGYFDNLASTLLVLK 198
Query: 221 XY-NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXX 279
N I I P++FK + +L+ + ++N++ + + L L L + N
Sbjct: 199 LNRNRISAIPPKMFK-LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDG 257
Query: 280 XXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELD 339
N+ I + L+ L L +N + +++ A+ L ELD
Sbjct: 258 AFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELD 317
Query: 340 ISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX-XXXXXXXXXXXXXXIADMNYT-D 397
+++N L RL+ +SF + + L L I N + ++++T +
Sbjct: 318 LTFNHLSRLDDSSFLGL-SLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIE 376
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPK 457
G F L+ L L GN ++ I + L HLDLS N ++ S+ K
Sbjct: 377 DMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAF--SQMK 434
Query: 458 NIHKAAKNSFAL 469
+ + N+ +L
Sbjct: 435 KLQQLHLNTSSL 446
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 77/319 (24%), Positives = 120/319 (37%)
Query: 7 FMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDD 66
F S L++LDLS N+I E+ F +Q +LY+ ++ S M P D+
Sbjct: 144 FQS-LETLDLSNNNISELRTA-FPPLQ--------LKYLYINNNRVSSMEPGY----FDN 189
Query: 67 RGRYEIVCRRG-DMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHIT 125
+V + + + IP L L+ + N G FQ L+ L +
Sbjct: 190 LASTLLVLKLNRNRISAIPPKMFKLPQ--LQHLELNRNKIKNVDGLTFQGLGALKSLKMQ 247
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
+ + + FWG+ ++ L L HNN+T + G++ L+EL+L N I I +
Sbjct: 248 RNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAW 307
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCR 245
L L L N +S+L N + I F+ + LKT R
Sbjct: 308 EFCQKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLR 367
Query: 246 SCGLE-NINPMM--YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILE 302
+ + I M +S L L L L N+ GN +
Sbjct: 368 NNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQS 427
Query: 303 KSFSSQFKLQVLCLKRNRL 321
+FS KLQ L L + L
Sbjct: 428 NAFSQMKKLQQLHLNTSSL 446
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 186 (70.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 61/227 (26%), Positives = 98/227 (43%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L+L +N++ L YN FKG+ L LYLD N I +I + F + L+ L L+ NRIS
Sbjct: 66 LSLRYNSLQKL-KYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYF 124
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
YN + + E F+ +++L + RS L I ++ +L
Sbjct: 125 LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
LDLGYN+ N F + F LQ L L+ N+++ +
Sbjct: 185 LLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVI 244
Query: 325 TTTAFTNLTNLIELDISYNKLDRLEVAS-FDPIENSLRDLKISGNNI 370
T ++L LD+S N+++ S F + N L+ L + N +
Sbjct: 245 GQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPN-LQRLNLDSNKL 290
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 73/306 (23%), Positives = 111/306 (36%)
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN 229
+Y + K++ IPSS+ + LSL +N + KL +N I I+
Sbjct: 45 VYCESQKLQEIPSSIS---AGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNID 101
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
F I+ LK S + + + +L LDL YNQ
Sbjct: 102 ENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLS 161
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
N I + F L++L L NR+ + F + L EL + +N+ +L
Sbjct: 162 LHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLN 221
Query: 350 VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
+A F P SL++L + N I + +F+ P+L
Sbjct: 222 LALF-PRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNL 280
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDL-------SRN---------KFKGFDEKSYIM 453
Q LNL N L I + S I L + L SRN FKG E + I
Sbjct: 281 QRLNLDSNKLTFIGQEILDSWISLNDISLAGNIWECSRNICSLVNWLKSFKGLRENTIIC 340
Query: 454 SEPKNI 459
+ PK +
Sbjct: 341 ASPKEL 346
Score = 154 (59.3 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 60/247 (24%), Positives = 104/247 (42%)
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
NS + + ++ F G+ L +L L HN+I+++ + F G+ L+EL L N+I ++ F
Sbjct: 71 NS-LQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTF 129
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCR 245
+++LR L L++N++ L N + I IF+D + L+
Sbjct: 130 RPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELL--- 186
Query: 246 SCGLENINPMMYSILADLIYLD---LGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILE 302
G I + ++ A +I L L +NQ N VI +
Sbjct: 187 DLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQ 246
Query: 303 KSFSSQFKLQVLCLKRNRLAKVT-TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
+ LQ L L N + + + F + NL L++ NKL + D SL
Sbjct: 247 TMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWI-SLN 305
Query: 362 DLKISGN 368
D+ ++GN
Sbjct: 306 DISLAGN 312
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F + L+EL ++++ I + F V +LR L+L++N + SL F+G+ L L+L
Sbjct: 105 FNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHL 164
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N + +IP +F +L +L L +NRI LA +N ++N +
Sbjct: 165 RSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLAL 224
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
F + L+ + + I M + L LDL N+
Sbjct: 225 FPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLSGNE 264
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 179 (68.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 63/270 (23%), Positives = 111/270 (41%)
Query: 77 GDMANPIPIGQMD-LGTEVLKIVPSEENPNHLTIGPIFQ-QFQHLEELHITNSFIPAIGF 134
G+ + +G D L +L + S+ N +T P+ + L +L + + I I
Sbjct: 172 GNRIGTLELGAFDGLSRSLLTLRLSK---NRITQLPVRAFKLPRLTQLDLNRNRIRLIEG 228
Query: 135 HPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVL 194
F G+ SL L L NNI+ L D F G+ + L+L++N + + S L+ L L
Sbjct: 229 LTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQL 288
Query: 195 SLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINP 254
L++N I+++ + +N++ ++ E ++ L + + +I
Sbjct: 289 HLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAE 348
Query: 255 MMYSILADLIYLDLGYNQXXXXXXXXXXXXX---XXXXXXXXGNHFPVILEKSFSSQFKL 311
+ L L LDL +N+ GN + +++FS L
Sbjct: 349 GAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGL 408
Query: 312 QVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
+ L L N + V AF + NL EL IS
Sbjct: 409 EHLNLGGNAIRSVQFDAFVKMKNLKELHIS 438
Score = 164 (62.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 71/308 (23%), Positives = 122/308 (39%)
Query: 140 VPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+PS R LNL++N ++ + F+ + NLQE+YL+ N++ ++PS + S + L L H
Sbjct: 66 LPSWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAVPS-LGAASSHVVSLFLQH 124
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYS 258
N+I + N+I E+ F +K + + +
Sbjct: 125 NKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFD 184
Query: 259 ILA-DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLK 317
L+ L+ L L N+ N +I +F L+VL L+
Sbjct: 185 GLSRSLLTLRLSKNRITQLPVRAFKLPRLTQLDLNR-NRIRLIEGLTFQGLNSLEVLKLQ 243
Query: 318 RNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXX 377
RN ++K+T AF L+ + L + YN L + S + +L L +S N+I
Sbjct: 244 RNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGL-TALHQLHLSNNSI-ARIHRK 301
Query: 378 XXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLD 437
++ N T + + L L LS N++ I ++ L LD
Sbjct: 302 GWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLD 361
Query: 438 LSRNKFKG 445
L N+ G
Sbjct: 362 LDHNEISG 369
Score = 164 (62.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 78/345 (22%), Positives = 128/345 (37%)
Query: 103 NPNHLTIGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF 161
N N LT P + H+ L + ++ I ++ SL L+L+ NNIT + + F
Sbjct: 100 NNNELTAVPSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNTCF 159
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLS-DLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
++EL L N+I ++ F LS L L L+ NRI++L R
Sbjct: 160 PHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAFKLPRLTQLDLN 219
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXX 280
N I I F+ + L+ K + + + + L+ + L L YN
Sbjct: 220 R-NRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGS 278
Query: 281 XXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340
N I K +S KL L L N L ++ + L++L L +
Sbjct: 279 LYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRL 338
Query: 341 SYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIA--DMNYTDI 398
S+N + + +F + SLR L + N I + +
Sbjct: 339 SHNSISHIAEGAFKGLR-SLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSV 397
Query: 399 PKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443
K F L+ LNL GN ++ + + L L +S + F
Sbjct: 398 AKRAFSGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSDSF 442
Score = 120 (47.3 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 58/279 (20%), Positives = 107/279 (38%)
Query: 192 RVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLEN 251
R L+L++N++S++ P N++ + P + + + + + +
Sbjct: 71 RSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAV-PSLGAASSHVVSLFLQHNKIRS 129
Query: 252 INPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFK- 310
+ L LDL N GN + +F +
Sbjct: 130 VEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRS 189
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
L L L +NR+ ++ AF L L +LD++ N++ +E +F + NSL LK+ NNI
Sbjct: 190 LLTLRLSKNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGL-NSLEVLKLQRNNI 247
Query: 371 QXXXXXXXXXXXXXXXXXXIADMNYTDIPKG-LFKMNPHLQFLNLSGNNLQDIHNLLYQS 429
+ + ++ G L+ + L L+LS N++ IH +
Sbjct: 248 SKLTDGAFWGLSKMHVLH-LEYNSLVEVNSGSLYGLTA-LHQLHLSNNSIARIHRKGWSF 305
Query: 430 NIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAAKNSFA 468
KL L LS N DE+S ++ + + NS +
Sbjct: 306 CQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSIS 344
Score = 58 (25.5 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 12 KSLDLSYNDIVEINPEIFKDI 32
+SL+LSYN + EI+P F+D+
Sbjct: 71 RSLNLSYNKLSEIDPAGFEDL 91
Score = 41 (19.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 11 LKSLDLSYNDIVEINPEIF 29
L+ LDLS N+I E+ F
Sbjct: 141 LEVLDLSLNNITEVRNTCF 159
>UNIPROTKB|O94769 [details] [associations]
symbol:ECM2 "Extracellular matrix protein 2" species:9606
"Homo sapiens" [GO:0005614 "interstitial matrix" evidence=IEA]
[GO:0008201 "heparin binding" evidence=IEA] [GO:0010811 "positive
regulation of cell-substrate adhesion" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0070052
"collagen V binding" evidence=IEA] [GO:0005178 "integrin binding"
evidence=TAS] [GO:0005578 "proteinaceous extracellular matrix"
evidence=TAS] [GO:0007160 "cell-matrix adhesion" evidence=TAS]
InterPro:IPR001611 InterPro:IPR001007 Pfam:PF00093 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS51450 SMART:SM00214 GO:GO:0005578
eggNOG:COG4886 GO:GO:0030198 GO:GO:0008201 GO:GO:0005178
GO:GO:0007160 GO:GO:0010811 EMBL:CH471089 EMBL:AL137848
GO:GO:0005614 EMBL:AL157827 CTD:1842 HOGENOM:HOG000112319
HOVERGEN:HBG031529 KO:K08119 OrthoDB:EOG4868CR EMBL:AB011792
EMBL:AK312820 EMBL:BX537976 EMBL:BC107493 IPI:IPI00015315
IPI:IPI00967874 RefSeq:NP_001184224.1 RefSeq:NP_001184225.1
RefSeq:NP_001384.1 UniGene:Hs.117060 ProteinModelPortal:O94769
SMR:O94769 STRING:O94769 PhosphoSite:O94769 PaxDb:O94769
PRIDE:O94769 DNASU:1842 Ensembl:ENST00000344604
Ensembl:ENST00000444490 GeneID:1842 KEGG:hsa:1842 UCSC:uc004asf.4
UCSC:uc011lty.2 GeneCards:GC09M095257 HGNC:HGNC:3154 HPA:HPA035347
MIM:603479 neXtProt:NX_O94769 PharmGKB:PA27599 InParanoid:O94769
OMA:AVWSPKP PhylomeDB:O94769 GenomeRNAi:1842 NextBio:7543
ArrayExpress:O94769 Bgee:O94769 CleanEx:HS_ECM2
Genevestigator:O94769 GermOnline:ENSG00000106823 Uniprot:O94769
Length = 699
Score = 186 (70.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 67/237 (28%), Positives = 102/237 (43%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES--IPSSVFMHLSDLRVLSLAH 198
P + L LT N+I S+ D F G+ NL+ L L N I S I F L L L++
Sbjct: 343 PQITSLELTGNSIASIPDEAFNGLPNLERLDLSKNNITSSGIGPKAFKLLKKLMRLNMDG 402
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE--NINPMM 256
N + ++ + N++ I+ E D+ +L T + L N+NP+
Sbjct: 403 NNLIQIPSQLPSTLEELKVNE---NNLQAIDEESLSDLNQLVTLELEGNNLSEANVNPLA 459
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L L YL LG N+ N I E F+ K+ V+ L
Sbjct: 460 FKPLKSLAYLRLGKNKFRIIPQGLPGSIEELYLE---NNQIEEITEICFNHTRKINVIVL 516
Query: 317 KRNRLA--KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
+ N++ ++ A+ N NL +D+SYNKL V S+ P SL L + GN I+
Sbjct: 517 RYNKIEENRIAPLAWINQENLESIDLSYNKL--YHVPSYLP--KSLLHLVLLGNQIE 569
Score = 139 (54.0 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 82/349 (23%), Positives = 135/349 (38%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITS--LLDYNFKGMMNLQELYLDFNK 176
+ L +T + I +I F G+P+L L+L+ NNITS + FK + L L +D N
Sbjct: 345 ITSLELTGNSIASIPDEAFNGLPNLERLDLSKNNITSSGIGPKAFKLLKKLMRLNMDGNN 404
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE--INPEIFK 234
+ IPS + L +L+V N + + N++ E +NP FK
Sbjct: 405 LIQIPSQLPSTLEELKV---NENNLQAIDEESLSDLNQLVTLELEGNNLSEANVNPLAFK 461
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
++ L + I + + +L YL+ NQ
Sbjct: 462 PLKSLAYLRLGKNKFRIIPQGLPGSIEEL-YLE--NNQIEEITEICFNHTRKINVIVLRY 518
Query: 295 NHFPV--ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N I ++ +Q L+ + L N+L V + +L +L+ L N+++R+
Sbjct: 519 NKIEENRIAPLAWINQENLESIDLSYNKLYHVPSYLPKSLLHLVLLG---NQIERIPGYV 575
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXI-ADMN-YTDIPKGLFKMNPHLQ 410
F +E L L +S N + + D N IP G+ +M L
Sbjct: 576 FGHMEPGLEYLYLSFNKLADDGMDRVSFYGAYHSLRELFLDHNDLKSIPPGIQEMKA-LH 634
Query: 411 FLNLSGNNL-----QDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMS 454
FL L+ N + ++I N + L HL L N K + SY S
Sbjct: 635 FLRLNNNKIRNILPEEICNAEEDDDSNLEHLHLENNYIKIREIPSYTFS 683
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 73/324 (22%), Positives = 126/324 (38%)
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI--SKLAPRXXXXXXXXXXXXXXYND 224
+ L L N I SIP F L +L L L+ N I S + P+ N+
Sbjct: 345 ITSLELTGNSIASIPDEAFNGLPNLERLDLSKNNITSSGIGPKAFKLLKKLMRLNMDGNN 404
Query: 225 IVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL-GYNQXXXXXXXXXXX 283
+++I ++ ++ELK L+ I+ S L L+ L+L G N
Sbjct: 405 LIQIPSQLPSTLEELKV---NENNLQAIDEESLSDLNQLVTLELEGNNLSEANVNPLAFK 461
Query: 284 XXXXXXXXXXG-NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
G N F +I + S ++ L L+ N++ ++T F + + + + Y
Sbjct: 462 PLKSLAYLRLGKNKFRIIPQGLPGS---IEELYLENNQIEEITEICFNHTRKINVIVLRY 518
Query: 343 NKLDRLEVASFDPI-ENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKG 401
NK++ +A I + +L + +S N + + IP
Sbjct: 519 NKIEENRIAPLAWINQENLESIDLSYNKLYHVPSYLPKSLLHLV----LLGNQIERIPGY 574
Query: 402 LF-KMNPHLQFLNLSGNNLQD--IHNL-LYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPK 457
+F M P L++L LS N L D + + Y + L L L N K + E K
Sbjct: 575 VFGHMEPGLEYLYLSFNKLADDGMDRVSFYGAYHSLRELFLDHNDLKSIPPG---IQEMK 631
Query: 458 NIHKAAKNSFALQSSMGK---NAE 478
+H N+ +++ + + NAE
Sbjct: 632 ALHFLRLNNNKIRNILPEEICNAE 655
>UNIPROTKB|F1NF14 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0070100
Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
OMA:SVDCHGL EMBL:AADN02035923 IPI:IPI00587174
Ensembl:ENSGALT00000002967 ArrayExpress:F1NF14 Uniprot:F1NF14
Length = 1338
Score = 138 (53.6 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 50/162 (30%), Positives = 82/162 (50%)
Query: 50 SSASVMCPYMCECA---LDDRGR--YEIVCRRGDMAN-PIPIGQMDLGTEVLKIVPSEEN 103
S++S+ CP C C+ +D RGR EI AN P I ++ L ++K++P
Sbjct: 88 SASSITCPSACTCSNNVVDCRGRGLTEIP------ANLPEDIWEIRLEQNLIKVIP---- 137
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P F Q++ L+ + I+ + I I F G+ SL L L N IT + F
Sbjct: 138 PG------AFTQYKKLKRIDISKNQISEIAPDAFKGLKSLISLVLYGNKITEIPQGLFDD 191
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+++LQ L L+ NKI + + F L +L++LSL N++ ++
Sbjct: 192 LVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQTIS 233
Score = 130 (50.8 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 42/138 (30%), Positives = 62/138 (44%)
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P+HL P + L + I S + AIG F +P+LR +NL++N I + + F G
Sbjct: 341 PSHL---PEYTTDLRLNDNDI--SVLEAIGL--FKKLPNLRKINLSNNKIKEIREGTFDG 393
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
+QEL L N++ES+ +F L+ L+ L L N IS + N
Sbjct: 394 ASGVQELILTENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDN 453
Query: 224 DIVEINPEIFKDIQELKT 241
I I P F + L T
Sbjct: 454 HISTITPGAFSTLVSLST 471
Score = 111 (44.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/87 (34%), Positives = 49/87 (56%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYL---NLTHNNITSLLDYNFKGMMNLQELYLDFNKI 177
EL++ + + A+ P G+ + R+L +L++N+I+ L +Y F M L L L +N++
Sbjct: 570 ELYLEGNHLTAV---PK-GLSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRL 625
Query: 178 ESIPSSVFMHLSDLRVLSLAHNRISKL 204
IP F L LRVL+L N IS +
Sbjct: 626 RCIPVHAFNGLRSLRVLTLHGNDISSV 652
Score = 102 (41.0 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + K S+ L ++ L N ++ + F+N+T L L +SYN+L + V +F
Sbjct: 575 GNHLTAV-PKGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAF 633
Query: 354 DPIENSLRDLKISGNNI 370
+ + SLR L + GN+I
Sbjct: 634 NGLR-SLRVLTLHGNDI 649
Score = 100 (40.3 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 30/121 (24%), Positives = 54/121 (44%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
E+ + + I I F L+ ++++ N I+ + FKG+ +L L L NKI I
Sbjct: 125 EIRLEQNLIKVIPPGAFTQYKKLKRIDISKNQISEIAPDAFKGLKSLISLVLYGNKITEI 184
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
P +F L L++L L N+I+ L N + I+ +F ++ ++
Sbjct: 185 PQGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPLRSIQ 244
Query: 241 T 241
T
Sbjct: 245 T 245
Score = 91 (37.1 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 31/124 (25%), Positives = 51/124 (41%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L L N+I+ L FK + NL+++ L NKI+ I F S ++ L L N++ +
Sbjct: 351 LRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESV 410
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
R N I IN + F + ++ + I P +S L L
Sbjct: 411 HGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLS 470
Query: 265 YLDL 268
++L
Sbjct: 471 TINL 474
Score = 79 (32.9 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
++EL +T + + ++ F G+ L+ L L N+I+ + + F G+ +++ L L N I
Sbjct: 397 VQELILTENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHIS 456
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
+I F L L ++L N
Sbjct: 457 TITPGAFSTLVSLSTINLLAN 477
Score = 72 (30.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N V+ +FS+ +L L L NRL + AF L +L L + N + + SF+
Sbjct: 599 NSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 658
Query: 355 PIENSLRDLKISGN 368
+ SL L + N
Sbjct: 659 DLV-SLSHLALGTN 671
Score = 70 (29.7 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 396 TDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
T +PKGL HL ++LS N++ + N + + +L+ L LS N+ +
Sbjct: 579 TAVPKGLSAFR-HLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLR 626
Score = 68 (29.0 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 27/121 (22%), Positives = 51/121 (42%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGR 69
KLK +D+S N I EI P+ FK ++ L +L+ + P + DD
Sbjct: 146 KLKRIDISKNQISEIAPDAFKGLKSLISL--------VLYGNKITEIP---QGLFDDLVS 194
Query: 70 YEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHIT-NSF 128
+++ + N + + G LK++ +N +F + ++ LH+ N F
Sbjct: 195 LQLLLLNANKINCLRVNTFQ-GLHNLKLLSLYDNKLQTISKGLFAPLRSIQTLHLAQNPF 253
Query: 129 I 129
+
Sbjct: 254 V 254
Score = 64 (27.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
GLFK P+L+ +NLS N +++I + + L L+ N+ +
Sbjct: 365 GLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLE 408
Score = 62 (26.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 35/162 (21%), Positives = 61/162 (37%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N I E +F +Q L L N+L V F LT L L + N + + +F
Sbjct: 381 NKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFA 440
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ +S+R L + N+I +A N + L + L+ +
Sbjct: 441 GL-SSVRLLSLYDNHISTITPGAFSTLVSLSTINLLA--NSFNCNCHLAWLGKWLRKKRI 497
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEP 456
N + + + +I + +D +G DE S ++S P
Sbjct: 498 VSGNPRCLKPF-FLKDIPIQDVDAQDFTCEGNDESSCLLSPP 538
Score = 58 (25.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 21/115 (18%), Positives = 50/115 (43%)
Query: 329 FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
F L NL ++++S NK+ + +FD + +++L ++ N ++
Sbjct: 367 FKKLPNLRKINLSNNKIKEIREGTFDGA-SGVQELILTENQLESVHGRMFRGLTGLKTLM 425
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443
+ + + I F ++ L+L N++ I + + + L+ ++L N F
Sbjct: 426 -LRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSF 479
Score = 55 (24.4 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 23/125 (18%), Positives = 47/125 (37%)
Query: 223 NDIVEINP-EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
NDI + +FK + L+ + ++ I + + + L L NQ
Sbjct: 356 NDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMF 415
Query: 282 XXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
N I +F+ +++L L N ++ +T AF+ L +L +++
Sbjct: 416 RGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLL 475
Query: 342 YNKLD 346
N +
Sbjct: 476 ANSFN 480
Score = 55 (24.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 21/92 (22%), Positives = 31/92 (33%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N N I +F+ L+V
Sbjct: 582 PKGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRV 641
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V +F +L +L L + N L
Sbjct: 642 LTLHGNDISSVPEGSFNDLVSLSHLALGTNPL 673
Score = 55 (24.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 21/108 (19%), Positives = 43/108 (39%)
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
L+ + L N++ ++ F + + EL ++ N+L+ + F + L+ L + N+I
Sbjct: 373 LRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGL-TGLKTLMLRSNSI 431
Query: 371 QXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNN 418
+ D + + I G F L +NL N+
Sbjct: 432 SCINNDTFAGLSSVRLLS-LYDNHISTITPGAFSTLVSLSTINLLANS 478
Score = 51 (23.0 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L L GN++ + + + L+HL L N
Sbjct: 628 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTN 671
Score = 41 (19.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 412 LNLSGNNLQDIHNL-LYQSNIKLTHLDLSRNKFKGFDEKSY 451
L L+ N++ + + L++ L ++LS NK K E ++
Sbjct: 351 LRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTF 391
Score = 37 (18.1 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+ L SL L N I EI +F D+ +L
Sbjct: 168 LKSLISLVLYGNKITEIPQGLFDDLVSLQLL 198
>MGI|MGI:2389177 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:1902004 "positive regulation of
beta-amyloid formation" evidence=ISO;IMP] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2389177 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:347731 OMA:PCTYSKS OrthoDB:EOG45TCMT
EMBL:AY182029 EMBL:AK032485 EMBL:AK035773 EMBL:AK035858
EMBL:AK035882 EMBL:AK036366 EMBL:AK163753 EMBL:BC113178
EMBL:BC113784 IPI:IPI00266935 IPI:IPI00607982 RefSeq:NP_848793.1
UniGene:Mm.431318 ProteinModelPortal:Q8BZ81 SMR:Q8BZ81
STRING:Q8BZ81 PhosphoSite:Q8BZ81 PaxDb:Q8BZ81 PRIDE:Q8BZ81
Ensembl:ENSMUST00000105439 GeneID:216028 KEGG:mmu:216028
UCSC:uc007fkk.1 UCSC:uc007fkl.1 InParanoid:Q14CH3 NextBio:374957
Bgee:Q8BZ81 CleanEx:MM_LRRTM3 Genevestigator:Q8BZ81
GermOnline:ENSMUSG00000042846 Uniprot:Q8BZ81
Length = 582
Score = 184 (69.8 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 60/227 (26%), Positives = 98/227 (43%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L+L +N++ L YN FKG+ L LYLD N I +I + F + L+ L L+ NRIS
Sbjct: 66 LSLRYNSLQKL-KYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYF 124
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
YN + + E F+ +++L + RS L I ++ +L
Sbjct: 125 LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
LDLGYN+ N F + F LQ L ++ N+++ +
Sbjct: 185 LLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVI 244
Query: 325 TTTAFTNLTNLIELDISYNKLDRLEVAS-FDPIENSLRDLKISGNNI 370
T ++L LD+S N+++ S F + N L+ L + N +
Sbjct: 245 GQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPN-LQRLNLDSNKL 290
Score = 159 (61.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 73/306 (23%), Positives = 111/306 (36%)
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN 229
+Y + K++ IPSS+ + LSL +N + KL +N I I+
Sbjct: 45 VYCESQKLQEIPSSIS---AGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNID 101
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
F I+ LK S + + + +L LDL YNQ
Sbjct: 102 ENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLS 161
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
N I + F L++L L NR+ + F + L EL + +N+ +L
Sbjct: 162 LHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLN 221
Query: 350 VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
+A F P SL++L + N I + +F+ P+L
Sbjct: 222 LALF-PRLVSLQNLYMQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNL 280
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDL-------SRN---------KFKGFDEKSYIM 453
Q LNL N L I + S I L + L SRN FKG E + I
Sbjct: 281 QRLNLDSNKLTFIGQEILDSWISLNDISLAGNIWECSRNICSLVNWLRSFKGLRENTIIC 340
Query: 454 SEPKNI 459
+ PK +
Sbjct: 341 ASPKEL 346
Score = 154 (59.3 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 60/247 (24%), Positives = 104/247 (42%)
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
NS + + ++ F G+ L +L L HN+I+++ + F G+ L+EL L N+I ++ F
Sbjct: 71 NS-LQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTF 129
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCR 245
+++LR L L++N++ L N + I IF+D + L+
Sbjct: 130 RPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELL--- 186
Query: 246 SCGLENINPMMYSILADLIYLD---LGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILE 302
G I + ++ A +I L L +NQ N VI +
Sbjct: 187 DLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQ 246
Query: 303 KSFSSQFKLQVLCLKRNRLAKVT-TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
+ LQ L L N + + + F + NL L++ NKL + D SL
Sbjct: 247 TMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWI-SLN 305
Query: 362 DLKISGN 368
D+ ++GN
Sbjct: 306 DISLAGN 312
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F + L+EL ++++ I + F V +LR L+L++N + SL F+G+ L L+L
Sbjct: 105 FNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHL 164
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N + +IP +F +L +L L +NRI LA +N ++N +
Sbjct: 165 RSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLAL 224
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
F + L+ + + I M + L LDL N+
Sbjct: 225 FPRLVSLQNLYMQWNKISVIGQTMSWTWSSLQRLDLSGNE 264
>RGD|1304866 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1304866 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:CH473988 CTD:347731
OrthoDB:EOG45TCMT IPI:IPI00869756 RefSeq:NP_001099857.1
UniGene:Rn.214114 Ensembl:ENSRNOT00000033980 GeneID:294380
KEGG:rno:294380 UCSC:RGD:1304866 NextBio:638086 Uniprot:D3ZAL8
Length = 582
Score = 184 (69.8 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 60/227 (26%), Positives = 98/227 (43%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L+L +N++ L YN FKG+ L LYLD N I +I + F + L+ L L+ NRIS
Sbjct: 66 LSLRYNSLQKL-KYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYF 124
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
YN + + E F+ +++L + RS L I ++ +L
Sbjct: 125 LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
LDLGYN+ N F + F LQ L ++ N+++ +
Sbjct: 185 LLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVI 244
Query: 325 TTTAFTNLTNLIELDISYNKLDRLEVAS-FDPIENSLRDLKISGNNI 370
T ++L LD+S N+++ S F + N L+ L + N +
Sbjct: 245 GQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPN-LQRLNLDSNKL 290
Score = 158 (60.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 76/317 (23%), Positives = 115/317 (36%)
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN 229
+Y + K++ IPSS+ + LSL +N + KL +N I I+
Sbjct: 45 VYCESQKLQEIPSSIS---AGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNID 101
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
F I+ LK S + + + +L LDL YNQ
Sbjct: 102 ENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLS 161
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
N I + F L++L L NR+ + F + L EL + +N+ +L
Sbjct: 162 LHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLN 221
Query: 350 VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
+A F P SL++L + N I + +F+ P+L
Sbjct: 222 LALF-PRLVSLQNLYMQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNL 280
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDL-------SRN---------KFKGFDEKSYIM 453
Q LNL N L I + S I L + L SRN FKG E + +
Sbjct: 281 QRLNLDSNKLTFIGQEILDSWISLNDISLAGNIWECSRNICSLVNWLKSFKGLRENTILC 340
Query: 454 SEPK-----NIHKAAKN 465
+ PK N+ A KN
Sbjct: 341 ASPKELQGVNVIDAVKN 357
Score = 154 (59.3 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 60/247 (24%), Positives = 104/247 (42%)
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
NS + + ++ F G+ L +L L HN+I+++ + F G+ L+EL L N+I ++ F
Sbjct: 71 NS-LQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTF 129
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCR 245
+++LR L L++N++ L N + I IF+D + L+
Sbjct: 130 RPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELL--- 186
Query: 246 SCGLENINPMMYSILADLIYLD---LGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILE 302
G I + ++ A +I L L +NQ N VI +
Sbjct: 187 DLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQ 246
Query: 303 KSFSSQFKLQVLCLKRNRLAKVT-TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
+ LQ L L N + + + F + NL L++ NKL + D SL
Sbjct: 247 TMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWI-SLN 305
Query: 362 DLKISGN 368
D+ ++GN
Sbjct: 306 DISLAGN 312
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F + L+EL ++++ I + F V +LR L+L++N + SL F+G+ L L+L
Sbjct: 105 FNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHL 164
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N + +IP +F +L +L L +NRI LA +N ++N +
Sbjct: 165 RSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLAL 224
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
F + L+ + + I M + L LDL N+
Sbjct: 225 FPRLVSLQNLYMQWNKISVIGQTMSWTWSSLQRLDLSGNE 264
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 186 (70.5 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 65/256 (25%), Positives = 107/256 (41%)
Query: 116 FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN 175
F L+ L I+N+ I I F F+ +P+L+ LN+ N + + + + + +L++L L N
Sbjct: 75 FYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLARIPRGSHE-LGHLEKLDLRSN 133
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKD 235
I ++ S +L+ +R + L+ N IS L N I +I + F
Sbjct: 134 LISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKVNIEKLDLASNSITDIGTDHFSS 193
Query: 236 IQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGN 295
L T K + +N +S L L LDL N N
Sbjct: 194 FNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARN 253
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDP 355
+ + F + L+ L L NR+ VT LT+L LD+SYN++ ++S+
Sbjct: 254 DVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSH 313
Query: 356 IENSLRDLKISGNNIQ 371
L+ L + N IQ
Sbjct: 314 TPK-LKWLSLHSNRIQ 328
Score = 179 (68.1 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 77/335 (22%), Positives = 134/335 (40%)
Query: 140 VPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P+ R L L+ N I S+ KG LQ L + N I I F +L +L++L++
Sbjct: 50 IPNNTRILLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRK 109
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYS 258
NR++++ PR N I + E + +++ + + S
Sbjct: 110 NRLARI-PRGSHELGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTS 168
Query: 259 ILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKR 318
++ LDL N NH + + SFS KL+ L L R
Sbjct: 169 AKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTR 228
Query: 319 NRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXX 378
N + +V AF L +L + ++ N + RL+ F E L+ L +S N +Q
Sbjct: 229 NMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEG-LKHLNLSTNRVQAVTEGWM 287
Query: 379 XXXXXXXXXXXIADMNYTDIPK---GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
+ D++Y I + P L++L+L N +Q + + ++ +L
Sbjct: 288 FGLTSLE----VLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEE 343
Query: 436 LDLSRNKFKGFDEKSYI-MSEPKNIHKAAKNSFAL 469
L LS N + + + MS ++HK +S L
Sbjct: 344 LILSANSIDSLHKFALVGMS---SLHKLDLSSNTL 375
Score = 155 (59.6 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 69/311 (22%), Positives = 120/311 (38%)
Query: 118 HLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKI 177
HLE+L + ++ I + + ++R ++L+ N I+ L +N+++L L N I
Sbjct: 124 HLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKVNIEKLDLASNSI 183
Query: 178 ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQ 237
I + F + L L LA N I+ L N I E+ F +
Sbjct: 184 TDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIREVRFLAFNQLP 243
Query: 238 ELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHF 297
L+ + ++ M+ L +L+L N+ N
Sbjct: 244 SLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQI 303
Query: 298 PVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
S+S KL+ L L NR+ + + +F L L EL +S N +D L + +
Sbjct: 304 QSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANSIDSLHKFALVGM- 362
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD-----IPKGLFKMNPHLQFL 412
+SL L +S N + + + +T+ IPK F+ P L+ L
Sbjct: 363 SSLHKLDLSSNTL--AVCVEDGAVLYNTSMPFLRSLRFTNNQLRVIPKRAFERFPALEEL 420
Query: 413 NLSGNNLQDIH 423
+L+ N + IH
Sbjct: 421 DLTDNPIATIH 431
Score = 132 (51.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 54/262 (20%), Positives = 99/262 (37%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F F L L + + I + F + L L+LT N I + F + +LQ + L
Sbjct: 191 FSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSL 250
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N + + +F L+ L+L+ NR+ + YN I +
Sbjct: 251 ARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISS 310
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
+ +LK S ++++ + +L L L L N
Sbjct: 311 WSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANSIDSLHKFALVGMSSLHKLDL 370
Query: 293 XGNHFPVILEKS---FSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
N V +E +++ L+ L N+L + AF L ELD++ N + +
Sbjct: 371 SSNTLAVCVEDGAVLYNTSMPFLRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATI 430
Query: 349 EVASFDPIENSLRDLKISGNNI 370
+F+P+E L+ L ++ ++I
Sbjct: 431 HPEAFEPLE--LKRLVMNSSSI 450
Score = 129 (50.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 51/234 (21%), Positives = 94/234 (40%)
Query: 105 NHLT-IGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+T + F + + LE L +T + I + F F +PSL+ ++L N++ L D F
Sbjct: 205 NHITTLNQFSFSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFY 264
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
L+ L L N+++++ L+ L VL L++N+I
Sbjct: 265 ACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHS 324
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I + F+ +++L+ + +++++ ++ L LDL N
Sbjct: 325 NRIQSLPSGSFRVLRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAV 384
Query: 283 XXXXXX----XXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNL 332
N VI +++F L+ L L N +A + AF L
Sbjct: 385 LYNTSMPFLRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPEAFEPL 438
Score = 40 (19.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L++LD+S N I I+ E F ++ + +L
Sbjct: 78 LQTLDISNNIIRHIDFEFFYNLPNLKIL 105
Score = 37 (18.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
++ LDL+ N I +I + F L
Sbjct: 173 IEKLDLASNSITDIGTDHFSSFNTLVTL 200
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 186 (70.5 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 86/355 (24%), Positives = 141/355 (39%)
Query: 105 NHLTIGP--IFQQFQHLEELHITNSFIPAIGFHP--FWGVPSLRYLNLTHNNITSLLDYN 160
N++T P F+ F LEEL + + + I HP G+ L+ L L +N + ++
Sbjct: 2 NNITQLPEDAFKNFPFLEELRLAGNDLSFI--HPKALSGLKELKVLTLQNNQLKTVPSEA 59
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
+G+ LQ L LD N I S+P F L+ LR L L N ++++ +
Sbjct: 60 IRGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTL 119
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXX 280
N I I F ++ L + ++++ + L +L LDL YN
Sbjct: 120 ALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAI 179
Query: 281 XXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340
N VI + +F L+ + L N L+ V +AF NL++L L I
Sbjct: 180 KALPSLKELLFHS-NSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVI 238
Query: 341 SYNKLDRLEVASFDPIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDI 398
+ V F + + L L ++G I D++Y +I
Sbjct: 239 RGASM----VQRFPNLTGTVHLESLTLTGTKISSISSNLCQEQKMLRTL----DLSYNNI 290
Query: 399 PKGLFKMNP--HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
K L N L+ ++L N + I +Q L LDLSRN ++++
Sbjct: 291 -KDLPSFNGCYALEEISLQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAF 344
Score = 170 (64.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 71/333 (21%), Positives = 129/333 (38%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
+ L+ L + N+ + + G+ +L+ L L N+ITS+ + +F+G+ L+ L+LD N
Sbjct: 40 KELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNS 99
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ +P +L L+ L+LA N+IS + N I + F +
Sbjct: 100 LTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGL 159
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L+T L P L L L N N
Sbjct: 160 DNLETLDLNYNNLGEF-PQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNP 218
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELD---ISYNKLDRLEVASF 353
+ +F + L L ++ + + F NLT + L+ ++ K+ + ++
Sbjct: 219 LSFVGNSAFHNLSDLHSLVIRGASMVQ----RFPNLTGTVHLESLTLTGTKISSIS-SNL 273
Query: 354 DPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLN 413
+ LR L +S NNI+ + I +G F+ L+ L+
Sbjct: 274 CQEQKMLRTLDLSYNNIKDLPSFNGCYALEEIS---LQRNQIHQIKEGTFQGLTSLRILD 330
Query: 414 LSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
LS N + +IH+ + +T+LD+S N+ F
Sbjct: 331 LSRNLIHEIHDRAFAKLGSITNLDISFNELTSF 363
Score = 168 (64.2 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 67/258 (25%), Positives = 103/258 (39%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F L LH+ N+ I ++G H F G+ +L L+L +NN+ K + +L+EL
Sbjct: 132 FTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEF-PQAIKALPSLKELLF 190
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N I IP F LR + L N +S + +V+ P +
Sbjct: 191 HSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPNL 250
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
+ L++ + +I+ + L LDL YN
Sbjct: 251 TGTVH-LESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLPSFNGCYALEEISLQR 309
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N I E +F L++L L RN + ++ AF L ++ LDIS+N E+ S
Sbjct: 310 --NQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITNLDISFN-----ELTS 362
Query: 353 FDPIE--NSLRDLKISGN 368
F P E N L LK+ GN
Sbjct: 363 F-PTEGLNGLNQLKLVGN 379
Score = 145 (56.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 63/280 (22%), Positives = 107/280 (38%)
Query: 91 GTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTH 150
G + LK++ + N + L+ L + + I ++ F G+ LR+L L
Sbjct: 38 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDD 97
Query: 151 NNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXX 210
N++T + + LQ L L NKI SIP F +LS L VL L +N+I L
Sbjct: 98 NSLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFD 157
Query: 211 XXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGY 270
YN++ E P+ K + LK S + I + L + L
Sbjct: 158 GLDNLETLDLNYNNLGEF-PQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYD 216
Query: 271 NQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFT 330
N G V + + L+ L L +++ +++
Sbjct: 217 NPLSFVGNSAFHNLSDLHSLVIRGASM-VQRFPNLTGTVHLESLTLTGTKISSISSNLCQ 275
Query: 331 NLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
L LD+SYN + ++ SF+ +L ++ + N I
Sbjct: 276 EQKMLRTLDLSYNNIK--DLPSFNGCY-ALEEISLQRNQI 312
Score = 138 (53.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 62/240 (25%), Positives = 104/240 (43%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDR 67
+ L++LDL+YN++ E P+ K + L L HS++ + P + A D
Sbjct: 159 LDNLETLDLNYNNLGEF-PQAIKALPSLKEL--------LFHSNSISVIP---DGAFDGN 206
Query: 68 GRYEIVCRRGDMANPIP-IGQM------DLGTEVLKIVPSEENPNHLTIGPIFQQFQHLE 120
+ D NP+ +G DL + V++ + +LT G + HLE
Sbjct: 207 PLLRTI-HLYD--NPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPNLT-GTV-----HLE 257
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
L +T + I +I + LR L+L++NNI L +N G L+E+ L N+I I
Sbjct: 258 SLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLPSFN--GCYALEEISLQRNQIHQI 315
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
F L+ LR+L L+ N I ++ R +N++ E + +LK
Sbjct: 316 KEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITNLDISFNELTSFPTEGLNGLNQLK 375
Score = 37 (18.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L+ L L+ ND+ I+P+ +++ +L
Sbjct: 18 LEELRLAGNDLSFIHPKALSGLKELKVL 45
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 186 (70.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 99/397 (24%), Positives = 155/397 (39%)
Query: 51 SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIG 110
+A +C C C D R + C G +P G + T+ L I + N++T
Sbjct: 24 AAPPLCAAPCSCDGDRR----VDCS-GKGLTAVPEG-LSAFTQALDI-----SMNNITQL 72
Query: 111 P--IFQQFQHLEELHITNSFIPAIGFHP--FWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
P F+ F LEEL + + + I HP G+ L+ L L +N + ++ G+
Sbjct: 73 PEDAFKSFPFLEELQLAGNDLSLI--HPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSA 130
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
LQ L LD N I S+P F L LR L L N ++++ R N+I
Sbjct: 131 LQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNIS 190
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
I F ++ L + +++++ + L +L LDL YN
Sbjct: 191 SIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEFPQAIKALPSL 250
Query: 287 XXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
N VI + +F L+ + L N L+ V +AF NL++L L I L
Sbjct: 251 KELGFHS-NSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASL- 308
Query: 347 RLEVASFDPIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK 404
V F + + L L ++G I ++ N D+P F
Sbjct: 309 ---VQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLD-LSYNNIRDLPS--FN 362
Query: 405 MNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
L+ ++L N + I +Q L LDLSRN
Sbjct: 363 GCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRN 399
Score = 165 (63.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 75/334 (22%), Positives = 133/334 (39%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
+ L+ L + N+ + + G+ +L+ L L N+ITS+ + +F+G++ L+ L+LD N
Sbjct: 105 KELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNS 164
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ +P +L L+ L+LA N IS + N I ++ F +
Sbjct: 165 LTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGL 224
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L+T L+ P L L L N N
Sbjct: 225 DNLETLDLNYNYLDEF-PQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNP 283
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF--D 354
+ +F + L L ++ L + F NLT + L+ S L +++S D
Sbjct: 284 LSFVGNSAFHNLSDLHCLVIRGASLVQW----FPNLTGTVHLE-SLT-LTGTKISSIPDD 337
Query: 355 PIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
+N LR L +S NNI+ + + I + F+ L+ L
Sbjct: 338 LCQNQKMLRTLDLSYNNIRDLPSFNGCRALEEIS---LQRNQISLIKENTFQGLTSLRIL 394
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
+LS N +++IH+ + +T+LD+S N+ F
Sbjct: 395 DLSRNLIREIHSGAFAKLGTITNLDVSFNELTSF 428
Score = 136 (52.9 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 59/254 (23%), Positives = 106/254 (41%)
Query: 12 KSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYE 71
++LD+S N+I ++ + FK F L L + S++ P AL +
Sbjct: 60 QALDISMNNITQLPEDAFKS-------FPFLEELQLAGNDLSLIHPK----ALSGLKELK 108
Query: 72 IVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQHLEELHITNSFI 129
++ + + +P + G L+ + + N H+T P F+ L L + ++ +
Sbjct: 109 VLTLQNNQLRTVPSEAIH-GLSALQSLRLDAN--HITSVPEDSFEGLVQLRHLWLDDNSL 165
Query: 130 PAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLS 189
+ P +P+L+ L L NNI+S+ D+ F + +L L+L NKI+S+ F L
Sbjct: 166 TEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLD 225
Query: 190 DLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGL 249
+L L L +N + + P+ N I I F L+T L
Sbjct: 226 NLETLDLNYNYLDEF-PQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPL 284
Query: 250 ENINPMMYSILADL 263
+ + L+DL
Sbjct: 285 SFVGNSAFHNLSDL 298
Score = 100 (40.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I E +F L++L L RN + ++ + AF L + LD+S+N E+ SF
Sbjct: 375 NQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFN-----ELTSF- 428
Query: 355 PIE--NSLRDLKISGN 368
P E N L LK+ GN
Sbjct: 429 PTEGLNGLNQLKLVGN 444
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 186 (70.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 99/397 (24%), Positives = 155/397 (39%)
Query: 51 SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIG 110
+A +C C C D R + C G +P G + T+ L I + N++T
Sbjct: 24 AAPPLCAAPCSCDGDRR----VDCS-GKGLTAVPEG-LSAFTQALDI-----SMNNITQL 72
Query: 111 P--IFQQFQHLEELHITNSFIPAIGFHP--FWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
P F+ F LEEL + + + I HP G+ L+ L L +N + ++ G+
Sbjct: 73 PEDAFKSFPFLEELQLAGNDLSLI--HPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSA 130
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
LQ L LD N I S+P F L LR L L N ++++ R N+I
Sbjct: 131 LQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNIS 190
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
I F ++ L + +++++ + L +L LDL YN
Sbjct: 191 SIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEFPQAIKALPSL 250
Query: 287 XXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
N VI + +F L+ + L N L+ V +AF NL++L L I L
Sbjct: 251 KELGFHS-NSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASL- 308
Query: 347 RLEVASFDPIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK 404
V F + + L L ++G I ++ N D+P F
Sbjct: 309 ---VQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLD-LSYNNIRDLPS--FN 362
Query: 405 MNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
L+ ++L N + I +Q L LDLSRN
Sbjct: 363 GCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRN 399
Score = 165 (63.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 75/334 (22%), Positives = 133/334 (39%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
+ L+ L + N+ + + G+ +L+ L L N+ITS+ + +F+G++ L+ L+LD N
Sbjct: 105 KELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNS 164
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
+ +P +L L+ L+LA N IS + N I ++ F +
Sbjct: 165 LTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGL 224
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L+T L+ P L L L N N
Sbjct: 225 DNLETLDLNYNYLDEF-PQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNP 283
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF--D 354
+ +F + L L ++ L + F NLT + L+ S L +++S D
Sbjct: 284 LSFVGNSAFHNLSDLHCLVIRGASLVQW----FPNLTGTVHLE-SLT-LTGTKISSIPDD 337
Query: 355 PIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
+N LR L +S NNI+ + + I + F+ L+ L
Sbjct: 338 LCQNQKMLRTLDLSYNNIRDLPSFNGCRALEEIS---LQRNQISLIKENTFQGLTSLRIL 394
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
+LS N +++IH+ + +T+LD+S N+ F
Sbjct: 395 DLSRNLIREIHSGAFAKLGTITNLDVSFNELTSF 428
Score = 136 (52.9 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 59/254 (23%), Positives = 106/254 (41%)
Query: 12 KSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYE 71
++LD+S N+I ++ + FK F L L + S++ P AL +
Sbjct: 60 QALDISMNNITQLPEDAFKS-------FPFLEELQLAGNDLSLIHPK----ALSGLKELK 108
Query: 72 IVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP--IFQQFQHLEELHITNSFI 129
++ + + +P + G L+ + + N H+T P F+ L L + ++ +
Sbjct: 109 VLTLQNNQLRTVPSEAIH-GLSALQSLRLDAN--HITSVPEDSFEGLVQLRHLWLDDNSL 165
Query: 130 PAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLS 189
+ P +P+L+ L L NNI+S+ D+ F + +L L+L NKI+S+ F L
Sbjct: 166 TEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLD 225
Query: 190 DLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGL 249
+L L L +N + + P+ N I I F L+T L
Sbjct: 226 NLETLDLNYNYLDEF-PQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPL 284
Query: 250 ENINPMMYSILADL 263
+ + L+DL
Sbjct: 285 SFVGNSAFHNLSDL 298
Score = 100 (40.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I E +F L++L L RN + ++ + AF L + LD+S+N E+ SF
Sbjct: 375 NQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFN-----ELTSF- 428
Query: 355 PIE--NSLRDLKISGN 368
P E N L LK+ GN
Sbjct: 429 PTEGLNGLNQLKLVGN 444
>FB|FBgn0023095 [details] [associations]
symbol:caps "capricious" species:7227 "Drosophila
melanogaster" [GO:0007411 "axon guidance" evidence=IMP] [GO:0007424
"open tracheal system development" evidence=IMP] [GO:0016020
"membrane" evidence=NAS] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0007156
"homophilic cell adhesion" evidence=IDA] [GO:0035147 "branch
fusion, open tracheal system" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
GO:GO:0042995 GO:GO:0046331 InterPro:IPR000372 SMART:SM00013
GO:GO:0007476 GO:GO:0035147 ChiTaRS:CAPS CTD:828
FlyBase:FBgn0023095 RefSeq:NP_001036604.2 UniGene:Dm.2067
ProteinModelPortal:Q0E8F0 SMR:Q0E8F0 STRING:Q0E8F0 PRIDE:Q0E8F0
GeneID:39493 KEGG:dme:Dmel_CG11282 UCSC:CG11282-RC GenomeRNAi:39493
NextBio:813926 Bgee:Q0E8F0 Uniprot:Q0E8F0
Length = 748
Score = 185 (70.2 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 67/234 (28%), Positives = 96/234 (41%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F L+ELH+ ++ I + F G+ ++ LNL N I L F M+ L EL L
Sbjct: 115 FAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNL 174
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX-YNDIVEINPE 231
N+I I L +LRVL L N ++ + N + I
Sbjct: 175 GQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGG 234
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F+D++ L R GL NI+ L L +LDL N+
Sbjct: 235 AFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLN 294
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLK-RNRLAKVTTTAFTNLTNLIELDISYNK 344
N F VI +FS +L+ L L RL +V + AF+ TNL L++S NK
Sbjct: 295 IGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNK 348
Score = 184 (69.8 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 71/304 (23%), Positives = 115/304 (37%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
L +L+L+ N++ ++ + +F LQEL+LD NKI + + F+ LS + VL+L N I+
Sbjct: 97 LTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIA 156
Query: 203 KLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI-NPMMYSILA 261
+L R N I I+P + L+ L + + + L
Sbjct: 157 ELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALH 216
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
L L LG N G I + L+ L L NRL
Sbjct: 217 SLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRL 276
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG-NNIQXXXXXXXXX 380
+ T AF L L +L+I N + + +F + LR L+++G ++
Sbjct: 277 PAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRE-LRHLELTGAQRLRRVESGAFSG 335
Query: 381 XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSR 440
++ ++ PHL + L N L + L L LDLS
Sbjct: 336 NTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPW-ADLQTLDLSE 394
Query: 441 NKFK 444
N F+
Sbjct: 395 NPFE 398
Score = 160 (61.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 68/310 (21%), Positives = 117/310 (37%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNR 200
P+++ L + +N + ++ D + + L L L FN + +IP F + + L+ L L HN+
Sbjct: 72 PAIQRLVIKNNKLKTI-DSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNK 130
Query: 201 ISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSIL 260
I +++ + N I E+ F + +L + +I+P L
Sbjct: 131 IGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGL 190
Query: 261 ADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG-NHFPVILEKSFSSQFKLQVLCLKRN 319
+L L L N G N F I +F L L L+
Sbjct: 191 DNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGA 250
Query: 320 RLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXX 379
L ++ A L +L LD+S N+L + A+F + L L I N+ +
Sbjct: 251 GLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRL-GRLEQLNIGQNDFEVISSGAFS 309
Query: 380 XXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNN-LQDIHNLLYQSNIKLTHLDL 438
+ G F N +L+ LNLS N L ++ ++ L+ + L
Sbjct: 310 GLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVL 369
Query: 439 SRNKFKGFDE 448
N+ DE
Sbjct: 370 KANQLSSLDE 379
>MGI|MGI:1096866 [details] [associations]
symbol:Chad "chondroadherin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1096866 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001502 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM OMA:CHCHGGD EMBL:U96626 EMBL:BC012672
IPI:IPI00116674 RefSeq:NP_031715.1 UniGene:Mm.440523
ProteinModelPortal:O55226 SMR:O55226 STRING:O55226 PRIDE:O55226
Ensembl:ENSMUST00000040418 GeneID:12643 KEGG:mmu:12643
InParanoid:O55226 NextBio:281844 Bgee:O55226 CleanEx:MM_CHAD
Genevestigator:O55226 GermOnline:ENSMUSG00000039084 Uniprot:O55226
Length = 358
Score = 179 (68.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 64/245 (26%), Positives = 106/245 (43%)
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
N+F P + + F +P+L L+L H NI + F+G+ L LYL N I + + F
Sbjct: 60 NNF-PVLAANSFRTMPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAF 118
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND-IVEINPEIFKDIQELKTFKC 244
L++L L L HN++S+L PR N+ I E+ F+ ++L+
Sbjct: 119 DDLTELTYLYLDHNKVSEL-PRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYL 177
Query: 245 RSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKS 304
L ++ P + +L L NQ N I + +
Sbjct: 178 SENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNA 237
Query: 305 FSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
F S + L+ L L L K + AF+ +T L + + N+L++L +SF P +N L L
Sbjct: 238 FQSFGRYLETLWLDNTNLEKFSDAAFSGVTTLKHVHLDNNRLNQLP-SSF-PFDN-LETL 294
Query: 364 KISGN 368
++ N
Sbjct: 295 TLTNN 299
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 68/301 (22%), Positives = 118/301 (39%)
Query: 37 MLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLK 96
+LF + LL + A+ CP C C D + ++C + + + ++ +E K
Sbjct: 5 LLFSLVFLAILLPALAA--CPQNCHCHGDLQ---HVICDK------VGLQKIPKVSETTK 53
Query: 97 IVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSL 156
++ + N + F+ +L LH+ + I + F G+ L YL L+HN+I L
Sbjct: 54 LLNLQRNNFPVLAANSFRTMPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVL 113
Query: 157 LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXX 216
F + L LYLD NK+ +P + L +L +L L +N+I +L
Sbjct: 114 RAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLR 173
Query: 217 XXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXX 276
N + + P D++ L F L + S L + L L +N
Sbjct: 174 WLYLSENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVVEELKLSHNPLKSI 233
Query: 277 XXXXXXXXXXXXXXXXXGN-HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTT-AFTNLTN 334
N + + +FS L+ + L NRL ++ ++ F NL
Sbjct: 234 PDNAFQSFGRYLETLWLDNTNLEKFSDAAFSGVTTLKHVHLDNNRLNQLPSSFPFDNLET 293
Query: 335 L 335
L
Sbjct: 294 L 294
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 127 (49.8 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N+++ + + +F NL NL LD+S N + ++ +F + N L L + GNNI
Sbjct: 294 LEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHN-LHTLVLYGNNITDLKS 352
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ T I +G F P L L+L N+++ I + +Q+ L+
Sbjct: 353 DTFEGLGSLQLLLLNANQ-LTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLST 411
Query: 436 LDLSRN 441
L L++N
Sbjct: 412 LHLAKN 417
Score = 126 (49.4 bits), Expect = 6.2e-11, Sum P(4) = 6.2e-11
Identities = 49/176 (27%), Positives = 80/176 (45%)
Query: 45 LYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPI---GQ-MDLGTEVLKIVPS 100
L L SS ++ C+ + + RY+ C ++ P+P G +D L VP+
Sbjct: 225 LNLQGSSIEILQDKFMTCSGNRKRRYKKTCETAEIC-PLPCTCTGTTVDCRDSGLTYVPT 283
Query: 101 EENP---------NHLTIGPI--FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
P N ++ P F+ ++L L ++ + I I F G+ +L L L
Sbjct: 284 NLPPSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLY 343
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
NNIT L F+G+ +LQ L L+ N++ I F H+ L +LSL N I ++
Sbjct: 344 GNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSIS 399
Score = 110 (43.8 bits), Expect = 6.2e-11, Sum P(4) = 6.2e-11
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N+ I + + L L L NRL + F+NLT L L ISYNKL L+ +F+
Sbjct: 714 NYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFN 773
Query: 355 PIENSLRDLKISGNNI 370
+ N+LR L + GN+I
Sbjct: 774 GL-NALRILSLHGNDI 788
Score = 101 (40.6 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 42/160 (26%), Positives = 68/160 (42%)
Query: 44 FLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEEN 103
F+++L S CP C C DR + C G +P ++ + +++ +
Sbjct: 5 FIFILLIPESATCPAECVCV--DR---TVSCV-GQQLTEVP---QNIPNDTIRL---DLQ 52
Query: 104 PNHLT-IGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF 161
N +T IGP F +L+ L + ++ I I F + L+ L L+ N I L D F
Sbjct: 53 DNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVF 112
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
+ + L L L N I + + L VL+L N I
Sbjct: 113 QNNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHI 152
Score = 101 (40.6 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 33/131 (25%), Positives = 51/131 (38%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNR 200
PS + L N I+S+ ++FK + NL L L N I I F+ L +L L L N
Sbjct: 287 PSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNN 346
Query: 201 ISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSIL 260
I+ L N + I F + +L +++I+ + + L
Sbjct: 347 ITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNL 406
Query: 261 ADLIYLDLGYN 271
L L L N
Sbjct: 407 TSLSTLHLAKN 417
Score = 98 (39.6 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L + ++ I IG + F + +L+ L L N I ++ + +F ++ LQ+L L N+I +P
Sbjct: 49 LDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLP 108
Query: 182 SSVFMHLSDLRVLSLAHNRIS 202
+VF + L L L+ N I+
Sbjct: 109 DNVFQNNLKLTHLDLSENDIT 129
Score = 95 (38.5 bits), Expect = 0.00093, Sum P(4) = 0.00093
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
+L L+L++N+IT + D +F+ + L+EL L+ NK+ S V S+L +L L+ N I
Sbjct: 538 NLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNI 597
Score = 89 (36.4 bits), Expect = 3.0e-09, Sum P(4) = 3.0e-09
Identities = 33/130 (25%), Positives = 49/130 (37%)
Query: 241 TFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVI 300
T C GL I P A + L G N NH I
Sbjct: 495 TVDCNKRGLNTI-PTSIPRFATQLLLS-GNNISTVDLNSNIHVLENLEVLDLSNNHITFI 552
Query: 301 LEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSL 360
+KSF KL+ L L N+L ++ +NL LD+S N + F+ +
Sbjct: 553 NDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKATR-I 611
Query: 361 RDLKISGNNI 370
R++K+ GN++
Sbjct: 612 REIKVIGNDL 621
Score = 86 (35.3 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 26/84 (30%), Positives = 38/84 (45%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L N IT + +F +MNL+ L L N+I +I + F L L+ L L+ NRI L
Sbjct: 49 LDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLP 108
Query: 206 PRXXXXXXXXXXXXXXYNDIVEIN 229
NDI ++
Sbjct: 109 DNVFQNNLKLTHLDLSENDITVVS 132
Score = 73 (30.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 35/138 (25%), Positives = 55/138 (39%)
Query: 330 TNLT-NLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
TNL + E+ + N++ + SF ++N R L +S NI
Sbjct: 283 TNLPPSTTEIRLEQNQISSIPSHSFKNLKNLTR-LDLS-KNIITEIQPKAFLGLHNLHTL 340
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
+ N TD+ F+ LQ L L+ N L I + KL+ L L N K E
Sbjct: 341 VLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISE 400
Query: 449 KSYI-MSEPKNIHKAAKN 465
++ ++ +H AKN
Sbjct: 401 VTFQNLTSLSTLH-LAKN 417
Score = 71 (30.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 29/123 (23%), Positives = 43/123 (34%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I FK+++ L + I P + L +L L L N
Sbjct: 297 NQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFE 356
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N I +F KL +L L N + ++ F NLT+L L ++
Sbjct: 357 GLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLHLAK 416
Query: 343 NKL 345
N L
Sbjct: 417 NPL 419
Score = 65 (27.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 19/86 (22%), Positives = 35/86 (40%)
Query: 260 LADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRN 319
L L LDL +N+ N + +F+ L++L L N
Sbjct: 727 LYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGN 786
Query: 320 RLAKVTTTAFTNLTNLIELDISYNKL 345
++ + +AF+NLT++ + + N L
Sbjct: 787 DISFLPQSAFSNLTSITHIAVGSNSL 812
Score = 62 (26.9 bits), Expect = 7.9e-07, Sum P(5) = 7.9e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 304 SFSSQ--FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
SF S+ F L L N + ++ L +L +LD+S+N+L LE +F + L
Sbjct: 697 SFPSRIPFDTTELYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTR-LS 755
Query: 362 DLKISGNNIQ 371
L IS N ++
Sbjct: 756 TLIISYNKLR 765
Score = 61 (26.5 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 21/84 (25%), Positives = 33/84 (39%)
Query: 363 LKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDI 422
L +SGNNI +++ + T I F+ L+ L L+ N L
Sbjct: 517 LLLSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHF 576
Query: 423 HNLLYQSNIKLTHLDLSRNKFKGF 446
+++ L LDLS N + F
Sbjct: 577 SSMVLDEQSNLEILDLSGNNIQCF 600
Score = 61 (26.5 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 25/120 (20%), Positives = 44/120 (36%)
Query: 249 LENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
+ +I + L +L LDL N GN+ + +F
Sbjct: 299 ISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGL 358
Query: 309 FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
LQ+L L N+L + F ++ L L + N + + +F + SL L ++ N
Sbjct: 359 GSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNL-TSLSTLHLAKN 417
Score = 59 (25.8 bits), Expect = 7.5e-05, Sum P(4) = 7.5e-05
Identities = 29/142 (20%), Positives = 47/142 (33%)
Query: 180 IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQEL 239
+P+++ +++R L N+IS + N I EI P+ F + L
Sbjct: 281 VPTNLPPSTTEIR---LEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNL 337
Query: 240 KTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPV 299
T + ++ + L L L L NQ N
Sbjct: 338 HTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKS 397
Query: 300 ILEKSFSSQFKLQVLCLKRNRL 321
I E +F + L L L +N L
Sbjct: 398 ISEVTFQNLTSLSTLHLAKNPL 419
Score = 57 (25.1 bits), Expect = 9.5e-06, Sum P(4) = 9.5e-06
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 299 VILEKS-FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+ LE + FS+ +L L + N+L + AF L L L + N + L ++F +
Sbjct: 741 ISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDISFLPQSAFSNL- 799
Query: 358 NSLRDLKISGNNI 370
S+ + + N++
Sbjct: 800 TSITHIAVGSNSL 812
Score = 54 (24.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 25/127 (19%), Positives = 50/127 (39%)
Query: 315 CLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXX 374
C KR L + T+ T L+ +S N + +++ S + +L L +S N+I
Sbjct: 498 CNKRG-LNTIPTSIPRFATQLL---LSGNNISTVDLNSNIHVLENLEVLDLSNNHI-TFI 552
Query: 375 XXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLT 434
+ D + +L+ L+LSGNN+Q ++ + ++
Sbjct: 553 NDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKATRIR 612
Query: 435 HLDLSRN 441
+ + N
Sbjct: 613 EIKVIGN 619
Score = 54 (24.1 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 31/142 (21%), Positives = 56/142 (39%)
Query: 14 LDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIV 73
LDL N+I +I P F + + L + + +H+ + ++ + L R R +
Sbjct: 49 LDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLS-RNRIRHL 107
Query: 74 CRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIG 133
N + + +DL + +V + GP F + +L++ HI F
Sbjct: 108 -PDNVFQNNLKLTHLDLSENDITVVSDAQLQ-----GPEFLEVLNLDKNHI---FCLENN 158
Query: 134 FHPFWGVPSLRYLNLTHNNITS 155
W SL L L N +T+
Sbjct: 159 VISSW--VSLEVLTLNGNRLTT 178
Score = 53 (23.7 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 412 LNLSGNNLQ--DIH-NLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
L LSGNN+ D++ N+ N+++ LDLS N ++KS+
Sbjct: 517 LLLSGNNISTVDLNSNIHVLENLEV--LDLSNNHITFINDKSF 557
Score = 52 (23.4 bits), Expect = 3.0e-09, Sum P(4) = 3.0e-09
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 392 DMNY-TDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
D NY +IP L L+LS N L + N + + +L+ L +S NK +
Sbjct: 712 DANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLR 765
Score = 48 (22.0 bits), Expect = 6.2e-11, Sum P(4) = 6.2e-11
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
N I IN + F+ + +L+ + L + + M+ ++L LDL N
Sbjct: 547 NHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGN 595
Score = 43 (20.2 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 409 LQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
L+ L+L GN++ + + + +TH+ + N
Sbjct: 778 LRILSLHGNDISFLPQSAFSNLTSITHIAVGSN 810
Score = 42 (19.8 bits), Expect = 2.8e-08, Sum P(4) = 2.8e-08
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 412 LNLSGNNLQDI--HNL--LYQSNIKLTHLDLSRNKFKGFDEKSY 451
L L N + +I H+L LY LT LDLS N+ + ++
Sbjct: 709 LYLDANYINEIPAHDLNRLYS----LTKLDLSHNRLISLENNTF 748
Score = 41 (19.5 bits), Expect = 6.2e-11, Sum P(4) = 6.2e-11
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 10 KLKSLDLSYNDIVEIN 25
KL LDLS NDI ++
Sbjct: 117 KLTHLDLSENDITVVS 132
>RGD|2336 [details] [associations]
symbol:Chad "chondroadherin" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEP] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] InterPro:IPR001611
PROSITE:PS51450 RGD:2336 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001502 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 OrthoDB:EOG4K9BCM
OMA:CHCHGGD EMBL:AF004953 IPI:IPI00196534 RefSeq:NP_062037.1
UniGene:Rn.9899 ProteinModelPortal:O70210 STRING:O70210
Ensembl:ENSRNOT00000004435 GeneID:29195 KEGG:rno:29195 UCSC:RGD:2336
GeneTree:ENSGT00700000104056 InParanoid:O70210 NextBio:608331
Genevestigator:O70210 GermOnline:ENSRNOG00000003304 Uniprot:O70210
Length = 358
Score = 178 (67.7 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 64/245 (26%), Positives = 106/245 (43%)
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
N+F P + + F VP+L L+L H NI + F+G+ L LYL N I + + F
Sbjct: 60 NNF-PVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAF 118
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND-IVEINPEIFKDIQELKTFKC 244
L++L L L HN++S+L PR N+ I E+ F+ ++L+
Sbjct: 119 DDLTELTYLYLDHNKVSEL-PRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYL 177
Query: 245 RSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKS 304
L +++P + +L L NQ N I + +
Sbjct: 178 SENALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNA 237
Query: 305 FSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
F S + L+ L L L K + AF +T L + + N+L++L ++F P +N L L
Sbjct: 238 FQSFGRYLETLWLDNTNLEKFSDAAFAGVTTLKHVHLENNRLNQLP-STF-PFDN-LETL 294
Query: 364 KISGN 368
++ N
Sbjct: 295 TLTNN 299
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 67/295 (22%), Positives = 117/295 (39%)
Query: 43 IFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEE 102
+FL +L A CP C C D + ++C + + + ++ +E K++ +
Sbjct: 10 VFLAIL-LPALAACPQNCHCHGDLQ---HVICDK------VGLQKIPKVSETTKLLNLQR 59
Query: 103 NPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N + F+ +L LH+ + I + F G+ L YL L+HN+I L F
Sbjct: 60 NNFPVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFD 119
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
+ L LYLD NK+ +P + L +L +L L +N+I +L
Sbjct: 120 DLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSE 179
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N + ++P D++ L F L + S L + L L +N
Sbjct: 180 NALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQ 239
Query: 283 XXXXXXXXXXXGN-HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTT-AFTNLTNL 335
N + + +F+ L+ + L+ NRL ++ +T F NL L
Sbjct: 240 SFGRYLETLWLDNTNLEKFSDAAFAGVTTLKHVHLENNRLNQLPSTFPFDNLETL 294
>UNIPROTKB|Q2KIF2 [details] [associations]
symbol:LRG1 "Leucine-rich alpha-2-glycoprotein 1"
species:9913 "Bos taurus" [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005615 CTD:116844 eggNOG:COG4886 HOGENOM:HOG000234378
HOVERGEN:HBG000045 OMA:RCAGPEA OrthoDB:EOG4TMR2P GO:GO:0050873
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GeneTree:ENSGT00690000102197 EMBL:DAAA02019605 EMBL:BC112660
IPI:IPI00702820 RefSeq:NP_001039642.1 UniGene:Bt.53757
Ensembl:ENSBTAT00000003618 GeneID:514663 KEGG:bta:514663
InParanoid:Q2KIF2 NextBio:20871452 Uniprot:Q2KIF2
Length = 346
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 58/221 (26%), Positives = 90/221 (40%)
Query: 145 YLNLTHNNITSL-LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
+L + N+T L D+ +G+ NLQEL+L N++E + + L+VL L N ++
Sbjct: 71 FLAVEFFNLTQLPADF-LQGVPNLQELHLSSNRLEDFSPKFLLPVPQLKVLDLTRNSLTG 129
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
L P N + + ++ L+ L ++ P + DL
Sbjct: 130 LFPGFFRVSAALCTLVLKGNQLKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDL 189
Query: 264 IYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAK 323
+ LDL NQ GN V+ E + Q KL+ L L NRLA
Sbjct: 190 LTLDLSNNQLQTLPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLAS 249
Query: 324 VTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLK 364
V AF L L LD+S N L + + + + R+LK
Sbjct: 250 VAAGAFRGLQKLDMLDLSNNLLTTVPTGLWTSLGKAARNLK 290
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 132 (51.5 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 32/94 (34%), Positives = 55/94 (58%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F++ +L +++++N+ + I F G + L LT N + S+ FKG++ L+ L L
Sbjct: 545 FKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLML 604
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N+I + ++ F LS +R+LSL NRIS +AP
Sbjct: 605 RSNQISCVDNATFTGLSSVRLLSLYDNRISTIAP 638
Score = 128 (50.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 52/209 (24%), Positives = 85/209 (40%)
Query: 41 VTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPS 100
V + LL S A CP+ C C+ G + + C+ G +P G + E L +
Sbjct: 11 VAVLCGLL-SCAVNGCPHKCSCS----GSH-VDCQ-GQAFKTVPRG-IPRNAERLDL--D 60
Query: 101 EENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N +T F ++L LH+ N+ I I F G+ L + L N + L +
Sbjct: 61 RNNITRITKVD-FSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELL 119
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
F+ L L L N+I+++P F ++ ++ L L N IS +
Sbjct: 120 FQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTL 179
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGL 249
N+I I F + +L+T + S L
Sbjct: 180 NNNNITLIPLSSFNHMPKLRTLRLHSNNL 208
Score = 122 (48.0 bits), Expect = 5.6e-10, Sum P(3) = 5.6e-10
Identities = 37/134 (27%), Positives = 56/134 (41%)
Query: 139 GVP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
G+P + L+L NNIT + +F G+ NL+ L+L+ N+I I F L L + L
Sbjct: 49 GIPRNAERLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLN 108
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
NR+ L N I + + F+ I +K + S + I +
Sbjct: 109 RNRLQVLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAF 168
Query: 258 SILADLIYLDLGYN 271
L DL L L N
Sbjct: 169 RALRDLEILTLNNN 182
Score = 119 (46.9 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 42/152 (27%), Positives = 72/152 (47%)
Query: 55 MCPYMCECALDDRGRYEIV-CRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIF 113
+CP C C IV CRR + IP +L +++I + ++ G F
Sbjct: 271 ICPAACTC------NNNIVDCRRKGLTE-IPA---NLPEGIVEIRLEQNMIKNIPAGA-F 319
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
++ L+ + ++ + I I F G+ SL L L N I + F G+++LQ L L+
Sbjct: 320 STYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGLVSLQLLLLN 379
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
NKI + + F L +L +LSL N++ ++
Sbjct: 380 ANKINCLRVNTFKDLQNLNLLSLYDNKLQTIS 411
Score = 115 (45.5 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 36/133 (27%), Positives = 58/133 (43%)
Query: 117 QHLEELHITN---SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
+H +L + + S + A G F +P+LR +NL++N + + + F G + EL L
Sbjct: 524 EHTTDLRLNDNEISILEATG--AFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLT 581
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
NK++S+ +F L L+ L L N+IS + N I I P F
Sbjct: 582 GNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAF 641
Query: 234 KDIQELKTFKCRS 246
+ L T S
Sbjct: 642 NTLHSLSTINLLS 654
Score = 105 (42.0 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
LE+ I N IPA F + L+ ++L+ N I+ + + F G+ +L L L NKI
Sbjct: 306 LEQNMIKN--IPAGAFSTY---KKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIA 360
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
IP +F L L++L L N+I+ L N + I+ +F ++
Sbjct: 361 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRA 420
Query: 239 LKT 241
+KT
Sbjct: 421 IKT 423
Score = 95 (38.5 bits), Expect = 5.8e-05, Sum P(4) = 5.8e-05
Identities = 35/122 (28%), Positives = 54/122 (44%)
Query: 78 DMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPF 137
+M IP G ++ +I S+ + + F + L L + + I I F
Sbjct: 309 NMIKNIPAGAFSTYKKLKRIDLSKNQISEIA-EDAFSGLRSLTSLVLYGNKIAEIPKGLF 367
Query: 138 WGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
G+ SL+ L L N I L FK + NL L L NK+++I +F L ++ L LA
Sbjct: 368 DGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHLA 427
Query: 198 HN 199
N
Sbjct: 428 QN 429
Score = 90 (36.7 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNN 369
+L +L L N ++ + F+N+T L L +SYN++ + V +FD + SLR L + GN+
Sbjct: 769 QLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLR-SLRLLTLHGND 827
Query: 370 I 370
+
Sbjct: 828 L 828
Score = 89 (36.4 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 29/120 (24%), Positives = 47/120 (39%)
Query: 249 LENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
++NI +S L +DL NQ GN I + F
Sbjct: 311 IKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGL 370
Query: 309 FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
LQ+L L N++ + F +L NL L + NKL + F P+ +++ L ++ N
Sbjct: 371 VSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLR-AIKTLHLAQN 429
Score = 78 (32.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
EL +T + + ++ F G+ L+ L L N I+ + + F G+ +++ L L N+I +I
Sbjct: 577 ELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTI 636
Query: 181 PSSVFMHLSDLRVLSLAHN 199
F L L ++L N
Sbjct: 637 APGAFNTLHSLSTINLLSN 655
Score = 75 (31.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 30/128 (23%), Positives = 51/128 (39%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L++N + + AF+ L +D+S N++ + +F + SL L + GN I
Sbjct: 306 LEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLR-SLTSLVLYGNKIAEIPK 364
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
A+ + FK +L L+L N LQ I L+ +
Sbjct: 365 GLFDGLVSLQLLLLNAN-KINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKT 423
Query: 436 LDLSRNKF 443
L L++N F
Sbjct: 424 LHLAQNPF 431
Score = 75 (31.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 30/146 (20%), Positives = 56/146 (38%)
Query: 335 LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMN 394
++E+ + N + + +F + L+ + +S N I +
Sbjct: 301 IVEIRLEQNMIKNIPAGAFSTYKK-LKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGN-K 358
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI-M 453
+IPKGLF LQ L L+ N + + ++ L L L NK + + + +
Sbjct: 359 IAEIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPL 418
Query: 454 SEPKNIHKAAKNSFALQSSMGKNAEY 479
K +H A+N F + A+Y
Sbjct: 419 RAIKTLH-LAQNPFMCDCHLKWLADY 443
Score = 70 (29.7 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 314 LCLKRNRLAKVTTT-AFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L L N ++ + T AF L NL ++++S NKL + +FD L +L ++GN +Q
Sbjct: 529 LRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVL-ELLLTGNKLQ 586
Score = 69 (29.3 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 17/75 (22%), Positives = 37/75 (49%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + F L+ L L+ N+++ V FT L+++ L + N++ + +F
Sbjct: 582 GNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAF 641
Query: 354 DPIENSLRDLKISGN 368
+ + +SL + + N
Sbjct: 642 NTL-HSLSTINLLSN 655
Score = 65 (27.9 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
G FK P+L+ +NLS N L+DI + + L L+ NK + + +
Sbjct: 543 GAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMF 593
Score = 60 (26.2 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 22/86 (25%), Positives = 30/86 (34%)
Query: 260 LADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRN 319
L L LDL N N + +F L++L L N
Sbjct: 767 LKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGN 826
Query: 320 RLAKVTTTAFTNLTNLIELDISYNKL 345
L+ V AF +LT+L L + N L
Sbjct: 827 DLSTVPEGAFNHLTSLSHLALGANPL 852
Score = 59 (25.8 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
+FS+ +L L L N++ V AF L +L L + N L + +F+ + SL L
Sbjct: 787 TFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHL-TSLSHL 845
Query: 364 KISGN 368
+ N
Sbjct: 846 ALGAN 850
Score = 59 (25.8 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 28/120 (23%), Positives = 44/120 (36%)
Query: 300 ILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
ILE + F L+ + L N+L + AF ++EL ++ NKL + F +
Sbjct: 538 ILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLI 597
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
L+ L + N I + D + I G F L +NL N
Sbjct: 598 G-LKTLMLRSNQISCVDNATFTGLSSVRLLS-LYDNRISTIAPGAFNTLHSLSTINLLSN 655
Score = 58 (25.5 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 19/92 (20%), Positives = 34/92 (36%)
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
P+ ++++L + + ++ P+ +S + L L L YNQ
Sbjct: 761 PKELPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRL 820
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
GN + E +F+ L L L N L
Sbjct: 821 LTLHGNDLSTVPEGAFNHLTSLSHLALGANPL 852
Score = 57 (25.1 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
KLK +DLS N I EI + F ++ T L
Sbjct: 324 KLKRIDLSKNQISEIAEDAFSGLRSLTSL 352
Score = 53 (23.7 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 27/106 (25%), Positives = 39/106 (36%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXX 373
L L+ N L V NL L LD+S N + L +F + L L +S N I+
Sbjct: 750 LYLEGNLLTSVPKE-LPNLKQLTLLDLSNNSISHLAPLTFSNM-TQLATLILSYNQIRCV 807
Query: 374 XXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNL 419
+ + + +P+G F L L L N L
Sbjct: 808 PVHAFDGLRSLRLLTLHGN-DLSTVPEGAFNHLTSLSHLALGANPL 852
Score = 47 (21.6 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+P F L+ L L GN+L + + L+HL L N
Sbjct: 807 VPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGAN 850
Score = 46 (21.3 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 5 LIFMS--KLKSLDLSYNDIVEINPEIFKDI 32
L+F S KL LDLS N I + + F+ I
Sbjct: 118 LLFQSTTKLSRLDLSENQIQAVPRKAFRGI 147
Score = 41 (19.5 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 16/68 (23%), Positives = 33/68 (48%)
Query: 1 MEFTLIFMSKLKSLDLS-YNDIVEINPEIFKDIQDTTM---LFQVTIFLYLLHSSASVMC 56
++ L+ +K+ L ++ + D+ +N D + T+ LF + LH + +
Sbjct: 373 LQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHLAQN--- 429
Query: 57 PYMCECAL 64
P+MC+C L
Sbjct: 430 PFMCDCHL 437
Score = 37 (18.1 bits), Expect = 5.8e-05, Sum P(4) = 5.8e-05
Identities = 30/145 (20%), Positives = 45/145 (31%)
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKL-APRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
K+ IP + H +DLR L N IS L A N + +I F
Sbjct: 514 KLTKIPPHLPEHTTDLR---LNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFD 570
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
+ L++++ M+ L L L L NQ
Sbjct: 571 GAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYD 630
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRN 319
N I +F++ L + L N
Sbjct: 631 NRISTIAPGAFNTLHSLSTINLLSN 655
>UNIPROTKB|G3X6G8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:AYGKAPS EMBL:DAAA02043707
EMBL:DAAA02043700 EMBL:DAAA02043701 EMBL:DAAA02043702
EMBL:DAAA02043703 EMBL:DAAA02043704 EMBL:DAAA02043705
EMBL:DAAA02043706 Ensembl:ENSBTAT00000006288 Uniprot:G3X6G8
Length = 943
Score = 149 (57.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 70/289 (24%), Positives = 113/289 (39%)
Query: 56 CPYMCECALDDRGRYEIV-CRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLT-IGP-I 112
CP C C + G V C ++ +P G +D T L + + N LT + P +
Sbjct: 32 CPVPCRCR--EAGILLWVDCSERGLST-VPAG-LDPLTAYLDL-----SMNSLTELWPGV 82
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F + LEEL ++ + + I F G+ SL+ L L +N + + + LQ L L
Sbjct: 83 FHHLRFLEELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEALWELPGLQSLRL 142
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
D N I +P F L+ LR L L N ++++ R N I +
Sbjct: 143 DANLISLVPDRSFEGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTLALNRIGRVPDYA 202
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
F ++ L + + ++ + L +L LDL NQ
Sbjct: 203 FWNLSSLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPVAIQTLGRLQELGFH 262
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
N+ I EK+F LQ + N + V +AF +L L L ++
Sbjct: 263 -NNNIRAIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFQHLPGLHTLSLN 310
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/155 (27%), Positives = 74/155 (47%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDY-NFKGMMNLQELYLDFNKI 177
L+ +H ++ I +G F +P L L+L N T + ++ + +G +L+ L L +
Sbjct: 280 LQTIHFYDNPIQFVGRSAFQHLPGLHTLSL--NGATDIQEFPDLRGTTSLESLTLTRAGL 337
Query: 178 ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQ 237
+ +P + L LRVL L+HN I L P +N I E+ + F+++
Sbjct: 338 QRLPPGMCQQLPRLRVLELSHNLIEGL-P-SLRGCQKLEEIGLQHNRIWEVRADTFRELT 395
Query: 238 ELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
L++ + +I+P +S L L+ LDL NQ
Sbjct: 396 FLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTGNQ 430
Score = 82 (33.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNN 369
KL+ + L+ NR+ +V F LT L LD+S+N + + +F + SL L ++GN
Sbjct: 372 KLEEIGLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLR-SLVKLDLTGNQ 430
Query: 370 I 370
+
Sbjct: 431 L 431
Score = 49 (22.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 403 FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
F+ L+ L+LS N ++ IH + + L LDL+ N+
Sbjct: 391 FRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTGNQ 430
>ZFIN|ZDB-GENE-110125-1 [details] [associations]
symbol:rxfp1 "relaxin/insulin-like family peptide
receptor 1" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 ZFIN:ZDB-GENE-110125-1 GO:GO:0016021
GO:GO:0004930 InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 CTD:59350 KO:K04306 EMBL:HM135955
IPI:IPI00969701 RefSeq:NP_001177863.1 UniGene:Dr.159212
ProteinModelPortal:D9IDV5 GeneID:100498669 KEGG:dre:100498669
Uniprot:D9IDV5
Length = 748
Score = 181 (68.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 54/206 (26%), Positives = 94/206 (45%)
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND 224
+N+ + L N + + + +F+ L+ L L HNRI + P+ YN
Sbjct: 123 INVTMMSLQRNGLRKLNADMFLKYQSLQKLYLQHNRIKSVHPQAFRGLYNLTRLYLSYNR 182
Query: 225 IVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXX 284
I + P++F+D+ +L+ + L +I+ + +S L L+ L L N
Sbjct: 183 ITTLLPDVFQDLHKLEWLILENNSLHHISSLTFSGLRSLVLLVL-LNNALTKLDDICLEM 241
Query: 285 XXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
GN + +F S L VL L+RNR++++ AF+ L L ELD+S N+
Sbjct: 242 PRLNWLDIEGNKMETVGNVTFRSCNMLTVLVLQRNRISRIHAQAFSLLRKLGELDLSSNR 301
Query: 345 LDRLEVASFDPIENSLRDLKISGNNI 370
++ + F + + L+ L IS N I
Sbjct: 302 IEAIPPDLFVNLGDLLQ-LNISYNPI 326
Score = 122 (48.0 bits), Expect = 0.00042, P = 0.00042
Identities = 46/217 (21%), Positives = 80/217 (36%)
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
SL+ L L HN I S+ F+G+ NL LYL +N+I ++ VF L L L L +N +
Sbjct: 148 SLQKLYLQHNRIKSVHPQAFRGLYNLTRLYLSYNRITTLLPDVFQDLHKLEWLILENNSL 207
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
++ N + +++ +I ++ L +E + + +
Sbjct: 208 HHISSLTFSGLRSLVLLVLLNNALTKLD-DICLEMPRLNWLDIEGNKMETVGNVTFRSCN 266
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
L L L N+ N I F + L L + N +
Sbjct: 267 MLTVLVLQRNRISRIHAQAFSLLRKLGELDLSSNRIEAIPPDLFVNLGDLLQLNISYNPI 326
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
+ F L L L I ++ + F+P++N
Sbjct: 327 MNLRVDHFDKLHKLKSLSIEGIEIGNIHRRMFEPLKN 363
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 183 (69.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 97/424 (22%), Positives = 169/424 (39%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMAN---PIP--IGQMDLGTEVLKIVPSEENPNHLTIG 110
CP C C L D + C R +A P+P + ++DL L + + + +HL
Sbjct: 47 CPTTCRC-LGDL----LDCSRKRLARLPEPLPSWVARLDLSHNRLSFIKAS-SMSHL--- 97
Query: 111 PIFQQFQHLEELHITNSFIPAIGFHPFWGVPS--LRYLNLTHNNITSLLDYNFKGMMNLQ 168
Q L E+ + N+ + I P G S + L+L N I +L + K +L+
Sbjct: 98 ------QSLREVKLNNNELETI---PNLGPVSANITLLSLAGNRIVEILPEHLKEFQSLE 148
Query: 169 ELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY-NDIVE 227
L L N I + ++ F L L+ L L NR++ + P N I
Sbjct: 149 TLDLSSNNISELQTA-FPALQ-LKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISA 206
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXX 287
I P++FK + +L+ + ++N++ + + L L L + N
Sbjct: 207 IPPKMFK-LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNM 265
Query: 288 XXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDR 347
N+ I + LQ L L +N + +++ A+ L ELD+++N L R
Sbjct: 266 EILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSR 325
Query: 348 LEVASFDPIENSLRDLKISGNNIQXXXX-XXXXXXXXXXXXXXIADMNYT-DIPKGLFKM 405
L+ +SF + + L L I N + ++++T + G F
Sbjct: 326 LDDSSFLGL-SLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSG 384
Query: 406 NPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAAKN 465
L+ L L GN ++ I + L HLDLS N ++ S+ K + + N
Sbjct: 385 LDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAF--SQMKKLQQLHLN 442
Query: 466 SFAL 469
+ +L
Sbjct: 443 TSSL 446
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 60/260 (23%), Positives = 114/260 (43%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQV-TIFLYLLHSSASVMCPYMCECALDD 66
+ LK+L L YN+I I P FK + + L ++ LH+ + L D
Sbjct: 81 LPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYLHTRTFTALKRLVRLDLSD 140
Query: 67 RGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITN 126
C +M + I + Q+ L E+L +N N + + ++L +++
Sbjct: 141 -------CNLFNMPDRIFLEQITL-KELLCF----QN-NFRRVPGALRGMENLTHVYLER 187
Query: 127 SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFM 186
+ I A+ ++ G+ SL+YLNL N I + D FK ++ L+ YL+ N + +P F
Sbjct: 188 NKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFK 247
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
LS+L++L+L N ++ ++ N + I F+++ L T S
Sbjct: 248 GLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSLITLHLNS 307
Query: 247 CGLENINPMMYSILADLIYL 266
N+ + +S+ + ++
Sbjct: 308 ---NNLTSLPFSVFQPIYFI 324
Score = 136 (52.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 76/330 (23%), Positives = 122/330 (36%)
Query: 37 MLFQVTIFLYLL----HSSASVMCPYMCE--CALDDRGRYEIVCRRGDMANPIPIGQMDL 90
M F + I +Y L H+ + C C C ++C +M + +P +
Sbjct: 1 MCFIINIAVYFLLLPPHALSLWACTRSCPPTCTCTQEKSCSVLCDHVNMMD-LP---KEF 56
Query: 91 GTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTH 150
E I + + L+ F L+ L + + I I F G+P+L L + H
Sbjct: 57 PCEASSINLDKNSLKFLS-ERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAH 115
Query: 151 NN-ITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
N I L F + L L L + ++P +F+ L+ L N ++ P
Sbjct: 116 NEYIRYLHTRTFTALKRLVRLDLSDCNLFNMPDRIFLEQITLKELLCFQNNFRRV-PGAL 174
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLG 269
N I + + + L + K + IN + DLI L+
Sbjct: 175 RGMENLTHVYLERNKIEAV---AYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENF 231
Query: 270 Y---NQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTT 326
Y N GN + + FS +L+VL L RNRL+ +
Sbjct: 232 YLNDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIED 291
Query: 327 TAFTNLTNLIELDISYNKLDRLEVASFDPI 356
+F NLT+LI L ++ N L L + F PI
Sbjct: 292 GSFENLTSLITLHLNSNNLTSLPFSVFQPI 321
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 140 (54.3 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L L I+N+ I +G F G SLR L L +N IT L ++ FKG++ L+ L L+ N +
Sbjct: 174 LLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLT 233
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
S+P ++F L LR L L+ N
Sbjct: 234 SLPHNIFGGLGRLRALRLSDN 254
Score = 138 (53.6 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 52/160 (32%), Positives = 74/160 (46%)
Query: 48 LHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHL 107
+ A CP+ C CA D G + CR + + +P+ D TE L++ E+N +
Sbjct: 311 MECGAENSCPHPCRCA--D-GIVD--CREKSLTS-VPVTLPDDTTE-LRL---EQN--FI 358
Query: 108 TIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMM 165
T P F F+ L + ++N+ I I G+ L L L N I L FKG+
Sbjct: 359 TELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLG 418
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
+LQ L L+ N+I I F L L +LSL N I LA
Sbjct: 419 SLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLA 458
Score = 119 (46.9 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 95 LKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNIT 154
L+++ +N H FQ LE L + N+ + AI + SL L++++N IT
Sbjct: 126 LRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVIT 185
Query: 155 SLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
++ FKG +L+ L LD N+I + F L +L +L+L +N ++ L
Sbjct: 186 TVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSL 235
Score = 117 (46.2 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 30/90 (33%), Positives = 49/90 (54%)
Query: 118 HLEELHITNSFIPAIGFHPFWG-VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
H EL + ++ + I +G +P L L L N +T + F+G ++QEL L NK
Sbjct: 571 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 630
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
I+ I + +F+ L L+ L+L N+IS + P
Sbjct: 631 IKEISNKMFLGLHQLKTLNLYDNQISCVMP 660
Score = 114 (45.2 bits), Expect = 4.8e-05, Sum P(4) = 4.8e-05
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
EL + +FI + F LR ++L++NNI+ + G+ L L L NKI+ +
Sbjct: 350 ELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDL 409
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
PS VF L L++L L N IS + N+I + F ++ +K
Sbjct: 410 PSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIK 469
Query: 241 T 241
T
Sbjct: 470 T 470
Score = 112 (44.5 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 37/144 (25%), Positives = 63/144 (43%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQ 115
CP MC C G + C G IP D+ +++ ++ ++ +F +
Sbjct: 543 CPAMCHC----EGT-TVDCT-GRGLKEIP---RDIPLHTTELLLNDNELGRISSDGLFGR 593
Query: 116 FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN 175
HL +L + + + I + F G ++ L L N I + + F G+ L+ L L N
Sbjct: 594 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN 653
Query: 176 KIESIPSSVFMHLSDLRVLSLAHN 199
+I + F HL+ L L+LA N
Sbjct: 654 QISCVMPGSFEHLNSLTSLNLASN 677
Score = 99 (39.9 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 44/149 (29%), Positives = 64/149 (42%)
Query: 108 TIGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
T+G +F+ Q L L + N+ I + H F G+ L L L +NN+TSL F G+
Sbjct: 186 TVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGR 245
Query: 167 LQELYLDFNKIESIPSSVFMHLSDL-RVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
L+ L L N P + HLS L R L A ++LAP ++
Sbjct: 246 LRALRLSDN-----PFACDCHLSWLSRFLRSA----TRLAPYTRCQSPSQLKG----QNV 292
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINP 254
+++ + FK L CG EN P
Sbjct: 293 ADLHDQEFK-CSGLTEHAPMECGAENSCP 320
Score = 98 (39.6 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 39/161 (24%), Positives = 61/161 (37%)
Query: 320 RLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXX 379
R +T+ T + EL + N + L SF LR + +S NNI
Sbjct: 333 REKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRR-LRRIDLSNNNISRIAHDALS 391
Query: 380 XXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLS 439
+ D+P G+FK LQ L L+ N + I ++ L+ L L
Sbjct: 392 GLKQLTTLVLYGN-KIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLY 450
Query: 440 RNKFKGFDEKSY-IMSEPKNIHKAAKNSFALQSSMGKNAEY 479
N + ++ M K +H AKN F ++ A+Y
Sbjct: 451 DNNIQSLANGTFDAMKSIKTVH-LAKNPFICDCNLRWLADY 490
Score = 88 (36.0 bits), Expect = 9.1e-10, Sum P(4) = 9.1e-10
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
L L N++ ++ F NLT L L ISYNKL L+ + + N+LR L + GN I
Sbjct: 795 LDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQRHALSGL-NNLRVLSLHGNRI 850
Score = 79 (32.9 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 31/132 (23%), Positives = 59/132 (44%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXX 373
L L++N + ++ +F++ L +D+S N + R+ + ++ L L + GN I+
Sbjct: 351 LRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQ-LTTLVLYGNKIKDL 409
Query: 374 XXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQS--NI 431
A+ + I K F+ L L+L NN+Q + N + + +I
Sbjct: 410 PSGVFKGLGSLQLLLLNAN-EISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSI 468
Query: 432 KLTHLDLSRNKF 443
K HL ++N F
Sbjct: 469 KTVHL--AKNPF 478
Score = 79 (32.9 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 27/108 (25%), Positives = 46/108 (42%)
Query: 165 MNLQELYLDFNKIESIPSS-VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
++ EL L+ N++ I S +F L L L L N+++ + P N
Sbjct: 570 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 629
Query: 224 DIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
I EI+ ++F + +LKT + + P + L L L+L N
Sbjct: 630 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 677
Score = 74 (31.1 bits), Expect = 1.0e-07, Sum P(4) = 1.0e-07
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N ++ +F++ KL L + N+L + A + L NL L + N++ L SF+
Sbjct: 800 NQITILSNYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFE 859
Query: 355 PIENSLRDLKISGN 368
++ SL + + N
Sbjct: 860 DLK-SLTHIALGSN 872
Score = 72 (30.4 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 25/120 (20%), Positives = 46/120 (38%)
Query: 249 LENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
+ + P +S L +DL N GN + F
Sbjct: 358 ITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGL 417
Query: 309 FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
LQ+L L N ++ + AF +L +L L + N + L +FD ++ S++ + ++ N
Sbjct: 418 GSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMK-SIKTVHLAKN 476
Score = 68 (29.0 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYI 452
GLF PHL L L N L I ++ + L L NK K K ++
Sbjct: 589 GLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFL 640
Score = 66 (28.3 bits), Expect = 1.8e-08, Sum P(5) = 1.8e-08
Identities = 23/105 (21%), Positives = 48/105 (45%)
Query: 314 LCLKRNRLAKVTTTA-FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQX 372
L L N L ++++ F L +L++L++ N+L +E +F+ + +++L++ N I+
Sbjct: 575 LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH-IQELQLGENKIKE 633
Query: 373 XXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
+ D + + G F+ L LNL+ N
Sbjct: 634 ISNKMFLGLHQLKTLN-LYDNQISCVMPGSFEHLNSLTSLNLASN 677
Score = 66 (28.3 bits), Expect = 1.0e-07, Sum P(4) = 1.0e-07
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N I +F +Q L L N++ +++ F L L L++ N++ + SF+
Sbjct: 605 NQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFE 664
Query: 355 PIENSLRDLKISGN 368
+ NSL L ++ N
Sbjct: 665 HL-NSLTSLNLASN 677
Score = 61 (26.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 29/123 (23%), Positives = 44/123 (35%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N + EI I + EL S +E I+ L L LDL NQ
Sbjct: 755 NQLKEIPRGIPAETSELYL---ESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFA 811
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
N + + S L+VL L NR++ + +F +L +L + +
Sbjct: 812 NLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGS 871
Query: 343 NKL 345
N L
Sbjct: 872 NPL 874
Score = 60 (26.2 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F+ L+ L + + I I F + SL L+L NNI SL + F M +++ ++
Sbjct: 413 VFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVH 472
Query: 172 LDFN 175
L N
Sbjct: 473 LAKN 476
Score = 53 (23.7 bits), Expect = 5.6e-09, Sum P(4) = 5.6e-09
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 396 TDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
T I F+ H+Q L L N +++I N ++ +L L+L N+
Sbjct: 608 TGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQ 654
Score = 51 (23.0 bits), Expect = 8.7e-09, Sum P(4) = 8.7e-09
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+IP+G+ L L N ++ IH + LT LDLS N+
Sbjct: 759 EIPRGIPAETSELY---LESNEIEQIHYERIRHLRSLTRLDLSNNQ 801
Score = 46 (21.3 bits), Expect = 1.8e-08, Sum P(5) = 1.8e-08
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 412 LNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
L+LS N + + N + + KL+ L +S NK +
Sbjct: 795 LDLSNNQITILSNYTFANLTKLSTLIISYNKLQ 827
Score = 45 (20.9 bits), Expect = 9.1e-10, Sum P(4) = 9.1e-10
Identities = 21/130 (16%), Positives = 44/130 (33%)
Query: 190 DLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGL 249
D L L N I++L P+ N+I I + +++L T +
Sbjct: 347 DTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKI 406
Query: 250 ENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQF 309
+++ ++ L L L L N+ N+ + +F +
Sbjct: 407 KDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMK 466
Query: 310 KLQVLCLKRN 319
++ + L +N
Sbjct: 467 SIKTVHLAKN 476
Score = 43 (20.2 bits), Expect = 3.4e-08, Sum P(5) = 3.4e-08
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+L+ L+L GN + + ++ LTH+ L N
Sbjct: 839 NLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSN 872
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+ L LD+S N I + +FK Q L
Sbjct: 172 ASLLRLDISNNVITTVGRRVFKGAQSLRSL 201
Score = 40 (19.1 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDI 32
++KL+ L L+ N I I F+D+
Sbjct: 123 LTKLRMLQLTDNQIHTIERNSFQDL 147
Score = 40 (19.1 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 10 KLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+L+ +DLS N+I I + ++ T L
Sbjct: 371 RLRRIDLSNNNISRIAHDALSGLKQLTTL 399
Score = 40 (19.1 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+ L+ L L+ N+I I + F+D+ ++L
Sbjct: 417 LGSLQLLLLNANEISCIRKDAFRDLHSLSLL 447
Score = 39 (18.8 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443
+I +F L+ LNL N + + ++ LT L+L+ N F
Sbjct: 633 EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 679
Score = 38 (18.4 bits), Expect = 4.4e-09, Sum P(4) = 4.4e-09
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
N + I P F+ ++ + ++ I+ M+ L L L+L NQ
Sbjct: 605 NQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQ 654
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 181 (68.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 78/308 (25%), Positives = 116/308 (37%)
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
+P L LNL HN I+ L D F MNL EL+L N I+ I + F +L +L L L+HN
Sbjct: 99 LPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHN 158
Query: 200 RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI--QELKTFKCRSCGLENINPMMY 257
+S N I + PE F + LK + S ++ +P +
Sbjct: 159 GLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGNSSLKRLELSSNQIKEFSPGCF 218
Query: 258 SILADLIYLDLG---YNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS--QFKLQ 312
L +L L L + N I +F Q L
Sbjct: 219 HTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLT 278
Query: 313 VLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR-DLKIS--GNN 369
L L RN L + +F L +L L + YN ++ L SF + N R DL+ S +
Sbjct: 279 TLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQS 338
Query: 370 IQXXXXXXXXXXXXX----XXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNL 425
I + D N+ I + F L+FL+LS N+ + L
Sbjct: 339 ISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLS-NSFSSLRTL 397
Query: 426 LYQSNIKL 433
++ + L
Sbjct: 398 TNETFLSL 405
Score = 142 (55.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 104/461 (22%), Positives = 175/461 (37%)
Query: 2 EFTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCE 61
EF + S LK L+LS N I E +P F + + + L L S +C +
Sbjct: 191 EFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSGLSLNNA--KLSPSLTEKLCLELSN 248
Query: 62 CALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI--GPIFQQFQHL 119
++++ + + + I D G + + + + N L + F HL
Sbjct: 249 TSIEN------LSLSSNQLDTISHTTFD-GLKQTNLTTLDLSRNSLRVMGNDSFAWLPHL 301
Query: 120 EELHITNSFIPAIGFHPFWGVPSLRYLNLTHN------NITSLL---DYNFKGMMNLQEL 170
E L + + I + F+G+ +LR L+L + ++TSL D++F+ + L+ L
Sbjct: 302 EYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYL 361
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
+D N I + F L L+ LSL+ N S L R P
Sbjct: 362 NMDDNNFPGIKRNTFTGLVRLKFLSLS-NSFSSL--RTLTNETFLSLAGC---------P 409
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
+ ++ + K K +S G +S L L LDLG N+
Sbjct: 410 LLLLNLTKNKISKIQS-GA-------FSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVE 461
Query: 291 XXXG-NHFPVILEKSFSSQFKLQVLCLKRNRLAKV--TTTAFTNLTNLIELDISYNKLDR 347
N + + SF+S LQ L L+R L V + + F L NL+ LD+S N +
Sbjct: 462 IYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIAN 521
Query: 348 LEVASFDPIENSLRDLKISGNNIQXXXXXXX-------XXXXXXXXXXXIADMNYTDIPK 400
+ +E L L + NN+ + + +IP
Sbjct: 522 INDELLKGLEK-LEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPV 580
Query: 401 GLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
FK L+ ++L NNL + ++ + + L L L +N
Sbjct: 581 EAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKN 621
Score = 131 (51.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 58/236 (24%), Positives = 93/236 (39%)
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
++ LNLTHN + L NF L L FN I + + L L +L+L HN I
Sbjct: 53 NITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQSLPWLEILNLQHNEI 112
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
S+L+ + N I +I + FK+++ L GL + L
Sbjct: 113 SQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQLQLE 172
Query: 262 DLIYLDLGYNQXXXXX--XXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRN 319
+L L L N+ N F + +L L L
Sbjct: 173 NLQELLLSNNKISSLTPEEFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSGLSLNNA 232
Query: 320 RLA-KVTTTAFTNLTNL-IE-LDISYNKLDRLEVASFDPI-ENSLRDLKISGNNIQ 371
+L+ +T L+N IE L +S N+LD + +FD + + +L L +S N+++
Sbjct: 233 KLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLR 288
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 61/261 (23%), Positives = 107/261 (40%)
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q LE L++ ++ I + F +L L+L N+I + + FK + NL +L L
Sbjct: 97 QSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLS 156
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY--NDIVEINPE 231
N + S + L +L+ L L++N+IS L P N I E +P
Sbjct: 157 HNGLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGNSSLKRLELSSNQIKEFSPG 216
Query: 232 IFKDIQELKTFKCRSCGLE-NINPMMYSILAD--LIYLDLGYNQXXXXXXXXXXXXXXXX 288
F + EL + L ++ + L++ + L L NQ
Sbjct: 217 CFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTN 276
Query: 289 XXXX--XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI--SYNK 344
N V+ SF+ L+ L L+ N + +++ +F L+NL LD+ S+ +
Sbjct: 277 LTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTR 336
Query: 345 LDRLEVASFDPIEN-SLRDLK 364
+ + S I++ S + LK
Sbjct: 337 -QSISLTSLPKIDDFSFQWLK 356
>FB|FBgn0262473 [details] [associations]
symbol:Tl "Toll" species:7227 "Drosophila melanogaster"
[GO:0019730 "antimicrobial humoral response" evidence=IGI]
[GO:0019732 "antifungal humoral response" evidence=IMP] [GO:0006963
"positive regulation of antibacterial peptide biosynthetic process"
evidence=IMP] [GO:0006967 "positive regulation of antifungal
peptide biosynthetic process" evidence=IMP] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;NAS]
[GO:0008063 "Toll signaling pathway" evidence=IEA;NAS] [GO:0005887
"integral to plasma membrane" evidence=NAS] [GO:0006952 "defense
response" evidence=NAS;TAS] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP;NAS;TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0007416 "synapse assembly" evidence=IMP]
[GO:0006955 "immune response" evidence=TAS] [GO:0009620 "response
to fungus" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0009880 "embryonic pattern specification"
evidence=TAS] [GO:0070976 "TIR domain binding" evidence=IPI]
[GO:0009617 "response to bacterium" evidence=NAS] [GO:0050832
"defense response to fungus" evidence=TAS] [GO:0045087 "innate
immune response" evidence=IDA;NAS;TAS] [GO:0019955 "cytokine
binding" evidence=TAS] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IEA;TAS] [GO:0035007 "regulation
of melanization defense response" evidence=TAS] [GO:0035172
"hemocyte proliferation" evidence=IMP;TAS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0007352 "zygotic specification of
dorsal/ventral axis" evidence=IEA;NAS] [GO:0045610 "regulation of
hemocyte differentiation" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043234 "protein complex" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0033565 "ESCRT-0
complex" evidence=IDA] [GO:0016201 "synaptic target inhibition"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027202 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 EMBL:AE014297 GO:GO:0016021 GO:GO:0007507
GO:GO:0009897 GO:GO:0050830 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0045087 GO:GO:0000910 GO:GO:0007416 GO:GO:0019732
GO:GO:0030097 GO:GO:0019955 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0004888 GO:GO:0008063 GO:GO:0006963
GO:GO:0035172 GO:GO:0006967 GeneTree:ENSGT00700000104286
GO:GO:0007352 GO:GO:0045610 GO:GO:0033565 SUPFAM:SSF52200
GO:GO:0016201 EMBL:M19969 EMBL:BT031153 EMBL:AY349649 EMBL:AY349650
EMBL:AY349651 EMBL:AY349652 EMBL:AY349653 EMBL:AY349654
EMBL:AY349655 EMBL:AY121616 PIR:A29943 RefSeq:NP_524518.1
RefSeq:NP_733166.1 UniGene:Dm.2347 ProteinModelPortal:P08953
SMR:P08953 DIP:DIP-34358N IntAct:P08953 STRING:P08953 PaxDb:P08953
PRIDE:P08953 EnsemblMetazoa:FBtr0085059 EnsemblMetazoa:FBtr0330155
GeneID:43222 KEGG:dme:Dmel_CG5490 CTD:109651 FlyBase:FBgn0262473
InParanoid:P08953 OMA:STNDICP OrthoDB:EOG4SF7MS PhylomeDB:P08953
ChiTaRS:Tl GenomeRNAi:43222 NextBio:832799 Bgee:P08953
GermOnline:CG5490 PANTHER:PTHR24371:SF0 Uniprot:P08953
Length = 1097
Score = 182 (69.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 81/357 (22%), Positives = 151/357 (42%)
Query: 101 EENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
EE P+HL F ++LE + ++ + + F +P L+ LNL N + +L ++
Sbjct: 186 EEMPSHL-----FDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLWSNQLHNLTKHD 240
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
F+G ++ + + N IE +P VF HL+++ ++L+ N L P+
Sbjct: 241 FEGATSVLGIDIHDNGIEQLPHDVFAHLTNVTDINLSANLFRSL-PQGLFDHNKHLNEVR 299
Query: 221 XYNDIVEIN--PE-IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXX 277
N+ V + P +F + EL+ + R+ L+++ ++ + + LG N
Sbjct: 300 LMNNRVPLATLPSRLFANQPELQILRLRA-ELQSLPGDLFEHSTQITNISLGDNLLKTLP 358
Query: 278 XXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIE 337
N + + F+ L L L+ N L ++ F+NL NL+
Sbjct: 359 ATLLEHQVNLLSLDLSNNRLTHLPDSLFAHTTNLTDLRLEDNLLTGISGDIFSNLGNLVT 418
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
L +S N+L ++ +F N LR L + N+I M T
Sbjct: 419 LVMSRNRLRTIDSRAFVST-NGLRHLHLDHNDIDLQQPLLDI-------------MLQTQ 464
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK--GFDEKSYI 452
I M+ L LNL N++ ++N + ++L LDLS N G+++ +++
Sbjct: 465 INSPFGYMHGLLT-LNLRNNSIIFVYNDWKNTMLQLRELDLSYNNISSLGYEDLAFL 520
>UNIPROTKB|P40197 [details] [associations]
symbol:GP5 "Platelet glycoprotein V" species:9606 "Homo
sapiens" [GO:0005518 "collagen binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0010544 "negative
regulation of platelet activation" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0007597 "blood
coagulation, intrinsic pathway" evidence=TAS] [GO:0030168 "platelet
activation" evidence=TAS] Reactome:REACT_604 Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030168 GO:GO:0005887
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007597 GO:GO:0007155 GO:GO:0007160
InterPro:IPR000372 SMART:SM00013 GO:GO:0010544 EMBL:L11238
EMBL:Z23091 IPI:IPI00027410 PIR:A48030 RefSeq:NP_004479.1
UniGene:Hs.73734 ProteinModelPortal:P40197 SMR:P40197 STRING:P40197
PhosphoSite:P40197 DMDM:729616 PaxDb:P40197 PeptideAtlas:P40197
PRIDE:P40197 DNASU:2814 Ensembl:ENST00000323007
Ensembl:ENST00000401815 GeneID:2814 KEGG:hsa:2814 UCSC:uc003ftv.1
CTD:2814 GeneCards:GC03M194115 HGNC:HGNC:4443 MIM:173511
neXtProt:NX_P40197 PharmGKB:PA28823 HOGENOM:HOG000112798
HOVERGEN:HBG005906 InParanoid:P40197 KO:K06260 OMA:AMIKIGQ
OrthoDB:EOG4JHCFD PhylomeDB:P40197 GenomeRNAi:2814 NextBio:11093
PMAP-CutDB:P40197 ArrayExpress:P40197 Bgee:P40197 CleanEx:HS_GP5
Genevestigator:P40197 GermOnline:ENSG00000178732 Uniprot:P40197
Length = 560
Score = 178 (67.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 83/389 (21%), Positives = 146/389 (37%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQ 115
CP C+C D + C GD+A I + L T + I+ L F
Sbjct: 21 CPPACKCVFRDAAQ----CSGGDVAR---ISALGLPTNLTHILLFGMGRGVLQ-SQSFSG 72
Query: 116 FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN 175
L+ L I++S I A+ F + L+ L L+ N IT L M+ L++L+LD N
Sbjct: 73 MTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHN 132
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKD 235
+ I ++F L +L+ L+L N++ L N++ + +
Sbjct: 133 ALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGA 192
Query: 236 IQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGN 295
+L+ S L +++ + + L L L N N
Sbjct: 193 QAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRN 252
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDP 355
H + F L +L L N LA++ F + L EL ++ +L L A+F
Sbjct: 253 HLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRN 312
Query: 356 IENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLS 415
+ LR L ++ + + T +P GL + L+ ++L
Sbjct: 313 LSR-LRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLR 371
Query: 416 GNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
N L+ + L+++ L + L N+ +
Sbjct: 372 RNRLRALPRALFRNLSSLESVQLDHNQLE 400
Score = 168 (64.2 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 65/304 (21%), Positives = 122/304 (40%)
Query: 143 LRYLNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
L L L HN + + D N F+ ++NLQEL L+ N+++ +P+S+F +L +L++L L+ N +
Sbjct: 124 LEQLFLDHNALRGI-DQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNL 182
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
+ L N +V ++ + + L + + +I P + L
Sbjct: 183 THLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLP 242
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L L L N N + F LQ L L R +L
Sbjct: 243 NLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQL 302
Query: 322 AKVTTTAFTNLTNLIELDISYN-KLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXX 380
+ AF NL+ L L ++ + +L L +F + L+ L + N +
Sbjct: 303 RTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGL-GELQVLALHSNGL-TALPDGLLR 360
Query: 381 XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSR 440
+ +P+ LF+ L+ + L N L+ + ++ + +LT + L
Sbjct: 361 GLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGH 420
Query: 441 NKFK 444
N ++
Sbjct: 421 NSWR 424
>UNIPROTKB|F1NL15 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
Pfam:PF01463 GeneTree:ENSGT00700000104083 EMBL:AADN02035923
IPI:IPI00818500 Ensembl:ENSGALT00000041140 ArrayExpress:F1NL15
Uniprot:F1NL15
Length = 1094
Score = 130 (50.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 42/138 (30%), Positives = 62/138 (44%)
Query: 104 PNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
P+HL P + L + I S + AIG F +P+LR +NL++N I + + F G
Sbjct: 97 PSHL---PEYTTDLRLNDNDI--SVLEAIGL--FKKLPNLRKINLSNNKIKEIREGTFDG 149
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
+QEL L N++ES+ +F L+ L+ L L N IS + N
Sbjct: 150 ASGVQELILTENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDN 209
Query: 224 DIVEINPEIFKDIQELKT 241
I I P F + L T
Sbjct: 210 HISTITPGAFSTLVSLST 227
Score = 102 (41.0 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + K S+ L ++ L N ++ + F+N+T L L +SYN+L + V +F
Sbjct: 331 GNHLTAV-PKGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAF 389
Query: 354 DPIENSLRDLKISGNNI 370
+ + SLR L + GN+I
Sbjct: 390 NGLR-SLRVLTLHGNDI 405
Score = 91 (37.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 31/124 (25%), Positives = 51/124 (41%)
Query: 146 LNLTHNNITSLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L L N+I+ L FK + NL+++ L NKI+ I F S ++ L L N++ +
Sbjct: 107 LRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESV 166
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
R N I IN + F + ++ + I P +S L L
Sbjct: 167 HGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLS 226
Query: 265 YLDL 268
++L
Sbjct: 227 TINL 230
Score = 79 (32.9 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
++EL +T + + ++ F G+ L+ L L N+I+ + + F G+ +++ L L N I
Sbjct: 153 VQELILTENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHIS 212
Query: 179 SIPSSVFMHLSDLRVLSLAHN 199
+I F L L ++L N
Sbjct: 213 TITPGAFSTLVSLSTINLLAN 233
Score = 72 (30.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N V+ +FS+ +L L L NRL + AF L +L L + N + + SF+
Sbjct: 355 NSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 414
Query: 355 PIENSLRDLKISGN 368
+ SL L + N
Sbjct: 415 DLV-SLSHLALGTN 427
Score = 70 (29.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 396 TDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
T +PKGL HL ++LS N++ + N + + +L+ L LS N+ +
Sbjct: 335 TAVPKGLSAFR-HLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLR 382
Score = 68 (29.0 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/87 (25%), Positives = 44/87 (50%)
Query: 86 GQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRY 145
G D + V +++ +E N G +F+ L+ L + ++ I I F G+ S+R
Sbjct: 145 GTFDGASGVQELILTE-NQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRL 203
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYL 172
L+L N+I+++ F +++L + L
Sbjct: 204 LSLYDNHISTITPGAFSTLVSLSTINL 230
Score = 55 (24.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 21/92 (22%), Positives = 31/92 (33%)
Query: 254 PMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQV 313
P S L +DL N N I +F+ L+V
Sbjct: 338 PKGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRV 397
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
L L N ++ V +F +L +L L + N L
Sbjct: 398 LTLHGNDISSVPEGSFNDLVSLSHLALGTNPL 429
Score = 51 (23.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
IP F L+ L L GN++ + + + L+HL L N
Sbjct: 384 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTN 427
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/225 (24%), Positives = 96/225 (42%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L HN+IT+L F L L+LD N+I ++ F L L+ L L+ N+I L
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
+N + ++PE+F +++L+T RS L I ++ L +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LDL N+ N I F L L L+ N+++ +T
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
+ L +LD++ N++ +++ F+ + N L+ L + N +
Sbjct: 246 CGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPN-LKILLMDNNKL 289
Score = 166 (63.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 48/182 (26%), Positives = 88/182 (48%)
Query: 92 TEVLKIVPSEENPNHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
T+++ + + + N L+ + P +F + L+ LH+ ++ + I FW SL +L+L+
Sbjct: 130 TQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLS 189
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
N + SL F G++ L+EL+L+ N++ I + F+ LS L L L N+IS L
Sbjct: 190 TNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGME 249
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLG 269
N+I I+ +F+ + LK + L +++ + S L L + L
Sbjct: 250 WTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSSLRSLTTVGLS 309
Query: 270 YN 271
N
Sbjct: 310 GN 311
Score = 147 (56.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 56/241 (23%), Positives = 95/241 (39%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+T F F L LH+ ++ I + F G+ L+ L L+ N I L + F
Sbjct: 71 NHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFT 130
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
++NLQ L L FN++ S+ +F L L+ L L N + + R
Sbjct: 131 QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLST 190
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N + + F + +L+ L IN + L+ L L L +N+
Sbjct: 191 NRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEW 250
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
GN I F + L++L + N+L + + ++L +L + +S
Sbjct: 251 TWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSSLRSLTTVGLSG 310
Query: 343 N 343
N
Sbjct: 311 N 311
Score = 138 (53.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 61/271 (22%), Positives = 98/271 (36%)
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
Y D S+P++ L LSL HN I+ L +N I +
Sbjct: 46 YCDSQGFHSVPNAT--DKGSLG-LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKE 102
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
+ F+ + +LK S + + ++ L +L LDL +NQ
Sbjct: 103 DAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTL 162
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
N I + F L+ L L NRL + F L L EL + +N+L ++
Sbjct: 163 HLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINF 222
Query: 351 ASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQ 410
A F + +SL L + N I + I +F+ P+L+
Sbjct: 223 AHFLRL-SSLHTLFLQWNKISNLTCGMEWTWSTLEKLDLTGN-EIKAIDLTVFETMPNLK 280
Query: 411 FLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
L + N L + + + S LT + LS N
Sbjct: 281 ILLMDNNKLNSLDSKILSSLRSLTTVGLSGN 311
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/225 (24%), Positives = 96/225 (42%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L HN+IT+L F L L+LD N+I ++ F L L+ L L+ N+I L
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
+N + ++PE+F +++L+T RS L I ++ L +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LDL N+ N I F L L L+ N+++ +T
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
+ L +LD++ N++ +++ F+ + N L+ L + N +
Sbjct: 246 CGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPN-LKILLMDNNKL 289
Score = 163 (62.4 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 47/182 (25%), Positives = 88/182 (48%)
Query: 92 TEVLKIVPSEENPNHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
T+++ + + + N L+ + P +F + L+ LH+ ++ + I FW SL +L+L+
Sbjct: 130 TQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLS 189
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
N + SL F G++ L+EL+L+ N++ I + F+ LS L L L N+IS L
Sbjct: 190 TNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMD 249
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLG 269
N+I I+ +F+ + LK + L +++ + + L L + L
Sbjct: 250 WTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLKSLTTVGLS 309
Query: 270 YN 271
N
Sbjct: 310 GN 311
Score = 146 (56.5 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 56/241 (23%), Positives = 94/241 (39%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+T F F L LH+ ++ I + F G+ L+ L L+ N I L + F
Sbjct: 71 NHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFT 130
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
++NLQ L L FN++ S+ +F L L+ L L N + + R
Sbjct: 131 QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLST 190
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N + + F + +L+ L IN + L+ L L L +N+
Sbjct: 191 NRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMDW 250
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
GN I F + L++L + N+L + + +L +L + +S
Sbjct: 251 TWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLKSLTTVGLSG 310
Query: 343 N 343
N
Sbjct: 311 N 311
Score = 138 (53.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 61/271 (22%), Positives = 98/271 (36%)
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
Y D S+P++ L LSL HN I+ L +N I +
Sbjct: 46 YCDSQGFHSVPNAT--DKGSLG-LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKE 102
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
+ F+ + +LK S + + ++ L +L LDL +NQ
Sbjct: 103 DAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTL 162
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
N I + F L+ L L NRL + F L L EL + +N+L ++
Sbjct: 163 HLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINF 222
Query: 351 ASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQ 410
A F + +SL L + N I + I +F+ P+L+
Sbjct: 223 AHFLRL-SSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGN-EIKAIDLTVFETMPNLK 280
Query: 411 FLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
L + N L + + + S LT + LS N
Sbjct: 281 ILLMDNNKLNSLDSKILNSLKSLTTVGLSGN 311
>RGD|3870 [details] [associations]
symbol:Tlr4 "toll-like receptor 4" species:10116 "Rattus
norvegicus" [GO:0000187 "activation of MAPK activity"
evidence=IEA;ISO] [GO:0001530 "lipopolysaccharide binding"
evidence=ISO;IDA] [GO:0001666 "response to hypoxia" evidence=IEP]
[GO:0001875 "lipopolysaccharide receptor activity"
evidence=IEA;ISO;ISS] [GO:0002218 "activation of innate immune
response" evidence=ISO] [GO:0002224 "toll-like receptor signaling
pathway" evidence=IDA] [GO:0002282 "microglial cell activation
involved in immune response" evidence=IDA] [GO:0002322 "B cell
proliferation involved in immune response" evidence=ISO] [GO:0002537
"nitric oxide production involved in inflammatory response"
evidence=IEA;ISO] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0002758 "innate immune
response-activating signal transduction" evidence=IMP] [GO:0003009
"skeletal muscle contraction" evidence=IEP] [GO:0004872 "receptor
activity" evidence=IDA;TAS] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0005887 "integral to plasma
membrane" evidence=IEA;ISO;TAS] [GO:0006691 "leukotriene metabolic
process" evidence=IDA] [GO:0006954 "inflammatory response"
evidence=IEP] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA;ISO] [GO:0009617 "response to bacterium" evidence=ISO]
[GO:0009636 "response to toxic substance" evidence=IEP] [GO:0009897
"external side of plasma membrane" evidence=IEA;ISO] [GO:0009986
"cell surface" evidence=IDA] [GO:0010572 "positive regulation of
platelet activation" evidence=IEA;ISO] [GO:0014823 "response to
activity" evidence=IEP] [GO:0016064 "immunoglobulin mediated immune
response" evidence=IEP] [GO:0030890 "positive regulation of B cell
proliferation" evidence=IEA;ISO] [GO:0031663
"lipopolysaccharide-mediated signaling pathway" evidence=ISO]
[GO:0032496 "response to lipopolysaccharide" evidence=ISO;IEP;IDA]
[GO:0032497 "detection of lipopolysaccharide" evidence=IEA;ISO;ISS]
[GO:0032570 "response to progesterone stimulus" evidence=IEP]
[GO:0032609 "interferon-gamma production" evidence=IEA;ISO]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IEA;ISO] [GO:0032700 "negative regulation of interleukin-17
production" evidence=IEA;ISO] [GO:0032707 "negative regulation of
interleukin-23 production" evidence=IEA;ISO] [GO:0032715 "negative
regulation of interleukin-6 production" evidence=IEA;ISO] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA;ISO] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA;ISO] [GO:0032727 "positive regulation of
interferon-alpha production" evidence=IEA;ISO] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA;ISO]
[GO:0032729 "positive regulation of interferon-gamma production"
evidence=IEA;ISO] [GO:0032732 "positive regulation of interleukin-1
production" evidence=IEA;ISO] [GO:0032733 "positive regulation of
interleukin-10 production" evidence=IEA;ISO] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=IEA;ISO]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=IEA;ISO] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IEA;ISO] [GO:0032760 "positive regulation of
tumor necrosis factor production" evidence=IEA;ISO] [GO:0032868
"response to insulin stimulus" evidence=IEP] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=ISO]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0042116 "macrophage activation" evidence=IEA;ISO] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA;ISO] [GO:0042535 "positive regulation of tumor necrosis
factor biosynthetic process" evidence=IEA;ISO] [GO:0042742 "defense
response to bacterium" evidence=IDA] [GO:0043065 "positive regulation
of apoptotic process" evidence=IMP] [GO:0043123 "positive regulation
of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IMP] [GO:0043548
"phosphatidylinositol 3-kinase binding" evidence=IPI] [GO:0045084
"positive regulation of interleukin-12 biosynthetic process"
evidence=IEA;ISO] [GO:0045087 "innate immune response"
evidence=IEA;TAS] [GO:0045348 "positive regulation of MHC class II
biosynthetic process" evidence=IEA;ISO] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA;ISO]
[GO:0045416 "positive regulation of interleukin-8 biosynthetic
process" evidence=IEA;ISO] [GO:0045429 "positive regulation of nitric
oxide biosynthetic process" evidence=IEA;ISO] [GO:0045471 "response
to ethanol" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046330 "positive regulation of JNK cascade" evidence=IEA;ISO]
[GO:0046696 "lipopolysaccharide receptor complex"
evidence=IEA;ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] [GO:0050671 "positive regulation of lymphocyte
proliferation" evidence=ISO] [GO:0050707 "regulation of cytokine
secretion" evidence=IEA] [GO:0050727 "regulation of inflammatory
response" evidence=IEA;ISO] [GO:0050729 "positive regulation of
inflammatory response" evidence=IMP] [GO:0050731 "positive regulation
of peptidyl-tyrosine phosphorylation" evidence=IDA] [GO:0050829
"defense response to Gram-negative bacterium" evidence=IEA;ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA;ISO;IMP] [GO:0051384 "response to glucocorticoid
stimulus" evidence=IEP] [GO:0051770 "positive regulation of
nitric-oxide synthase biosynthetic process" evidence=IEA;ISO]
[GO:0051930 "regulation of sensory perception of pain" evidence=IMP]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA;ISO] [GO:0060907 "positive regulation of macrophage
cytokine production" evidence=IEA;ISO] [GO:0070373 "negative
regulation of ERK1 and ERK2 cascade" evidence=IEA;ISO] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA;ISO]
[GO:0070430 "positive regulation of nucleotide-binding
oligomerization domain containing 1 signaling pathway"
evidence=IEA;ISO] [GO:0070434 "positive regulation of
nucleotide-binding oligomerization domain containing 2 signaling
pathway" evidence=IEA;ISO] [GO:0070542 "response to fatty acid"
evidence=IDA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=ISO] [GO:0071223 "cellular response to lipoteichoic acid"
evidence=IEA;ISO] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA;IEP;ISO] [GO:0045121 "membrane raft"
evidence=IDA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582 PIRSF:PIRSF037595
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255 RGD:3870 GO:GO:0005737
GO:GO:0048471 GO:GO:0009986 GO:GO:0005887 GO:GO:0006979 GO:GO:0009897
GO:GO:0032689 GO:GO:0050829 GO:GO:0014823 GO:GO:0045471 GO:GO:0070542
GO:GO:0009636 GO:GO:0043123 GO:GO:0051930 GO:GO:0042742 GO:GO:0006954
GO:GO:0001666 GO:GO:0070374 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 SMART:SM00082 GO:GO:0045087 GO:GO:0032722
GO:GO:0032755 GO:GO:0000187 GO:GO:0050729 GO:GO:0032868 GO:GO:0043065
GO:GO:0050731 GO:GO:0032720 GO:GO:0032715 GO:GO:0003009 GO:GO:0030890
GO:GO:0051092 GO:GO:0032570 GO:GO:0070373 GO:GO:0032757 GO:GO:0071260
GO:GO:0045429 GO:GO:0004888 GO:GO:0045416 GO:GO:0032729 GO:GO:0032760
GO:GO:0016064 GO:GO:0002224 GO:GO:0046696 GO:GO:0001530 GO:GO:0052033
GO:GO:0043388 GO:GO:0042535 GO:GO:0045348 GO:GO:0032735 GO:GO:0042346
GO:GO:0051770 GO:GO:0071223 GO:GO:0032733 GO:GO:0060907 GO:GO:0032727
GO:GO:0002537 GO:GO:0002282 GO:GO:0032728 GO:GO:0007252 GO:GO:0032609
SUPFAM:SSF52200 GO:GO:0032700 GO:GO:0045084 GO:GO:0001875
GO:GO:0032497 GO:GO:0010572 GO:GO:0032707 GO:GO:0060729 GO:GO:0045359
HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9 CTD:7099 eggNOG:NOG249751
HOGENOM:HOG000037951 KO:K10160 OrthoDB:EOG4P8FHQ GO:GO:0032732
GO:GO:0070430 GO:GO:0070434 EMBL:AF057025 IPI:IPI00212570
RefSeq:NP_062051.1 UniGene:Rn.14534 ProteinModelPortal:Q9QX05
SMR:Q9QX05 STRING:Q9QX05 PRIDE:Q9QX05 GeneID:29260 KEGG:rno:29260
UCSC:RGD:3870 InParanoid:Q9QX05 NextBio:608584 Genevestigator:Q9QX05
GermOnline:ENSRNOG00000010522 Uniprot:Q9QX05
Length = 835
Score = 126 (49.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 47/176 (26%), Positives = 77/176 (43%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+++ +F +L+ L + + L KVT + F +L L+ LDISY +++ FD I
Sbjct: 410 ILMSANFMGLEELEYLDFQHSTLKKVTEFSVFLSLEKLLYLDISYTNT-KID---FDGIF 465
Query: 358 N---SLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
SL LK++GN+ + ++ I +G+F LQ LN+
Sbjct: 466 LGLISLNTLKMAGNSFKDNTLSNVFTNTTNLTFLDLSKCQLEQISRGVFDTLYRLQLLNM 525
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKN--IHKAAKNSFA 468
S NNL + Y+ L LD S N+ + K + PK+ + NS A
Sbjct: 526 SHNNLLFLDPSHYKQLYSLRTLDCSFNRIE--TSKGILQHFPKSLAVFNLTNNSVA 579
Score = 103 (41.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 103 NPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NP + F F L+ L ++ I I + G+ L L LT N I S +F
Sbjct: 63 NPLKILRSYSFTNFSQLQWLDLSRCEIETIEDKAWHGLNQLSTLVLTGNPIKSFSPGSFS 122
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA-PRXXXXXXXXXXXXXX 221
G+ NL+ L K+ S+ L L+ L++AHN I P
Sbjct: 123 GLTNLENLVAVETKMTSLEGFHIGQLISLKKLNVAHNLIHSFKLPEYFSNLTNLEHVDLS 182
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLE-NINPM 255
YN I I+ KD+Q L+ + L+ ++NP+
Sbjct: 183 YNYIQTIS---VKDLQFLRENPQVNLSLDLSLNPI 214
Score = 83 (34.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 32/134 (23%), Positives = 52/134 (38%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P S + L+L+ N + L Y+F LQ L L +IE+I + L+ L L L
Sbjct: 51 IPYSTKNLDLSFNPLKILRSYSFTNFSQLQWLDLSRCEIETIEDKAWHGLNQLSTLVLTG 110
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENIN-PMMY 257
N I +P + + + LK + + P +
Sbjct: 111 NPIKSFSPGSFSGLTNLENLVAVETKMTSLEGFHIGQLISLKKLNVAHNLIHSFKLPEYF 170
Query: 258 SILADLIYLDLGYN 271
S L +L ++DL YN
Sbjct: 171 SNLTNLEHVDLSYN 184
Score = 44 (20.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 13 SLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMC 56
SLDLS N I I + F+ I+ L ++T+ S+ MC
Sbjct: 206 SLDLSLNPIDSIQAQAFQGIR----LHELTLRSNFNSSNVLKMC 245
Score = 42 (19.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQ 33
++ L+ +DLSYN I I+ KD+Q
Sbjct: 173 LTNLEHVDLSYNYIQTIS---VKDLQ 195
>UNIPROTKB|Q9QX05 [details] [associations]
symbol:Tlr4 "Toll-like receptor 4" species:10116 "Rattus
norvegicus" [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0034142 "toll-like
receptor 4 signaling pathway" evidence=IEA] [GO:0050707 "regulation
of cytokine secretion" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR017241 InterPro:IPR027168
Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 RGD:3870 GO:GO:0005737 GO:GO:0048471 GO:GO:0009986
GO:GO:0005887 GO:GO:0006979 GO:GO:0009897 GO:GO:0032689
GO:GO:0050829 GO:GO:0014823 GO:GO:0045471 GO:GO:0070542
GO:GO:0009636 GO:GO:0043123 GO:GO:0051930 GO:GO:0042742
GO:GO:0006954 GO:GO:0001666 GO:GO:0070374 GO:GO:0046330
GO:GO:0045944 InterPro:IPR000483 SMART:SM00082 GO:GO:0045087
GO:GO:0032722 GO:GO:0032755 GO:GO:0000187 GO:GO:0050729
GO:GO:0032868 GO:GO:0043065 GO:GO:0050731 GO:GO:0032720
GO:GO:0032715 GO:GO:0003009 GO:GO:0030890 GO:GO:0051092
GO:GO:0032570 GO:GO:0070373 GO:GO:0032757 GO:GO:0071260
GO:GO:0045429 GO:GO:0004888 GO:GO:0045416 GO:GO:0032729
GO:GO:0032760 GO:GO:0016064 GO:GO:0002224 GO:GO:0046696
GO:GO:0001530 GO:GO:0052033 GO:GO:0043388 GO:GO:0042535
GO:GO:0045348 GO:GO:0032735 GO:GO:0042346 GO:GO:0051770
GO:GO:0071223 GO:GO:0032733 GO:GO:0060907 GO:GO:0032727
GO:GO:0002537 GO:GO:0002282 GO:GO:0032728 GO:GO:0007252
GO:GO:0032609 SUPFAM:SSF52200 GO:GO:0032700 GO:GO:0045084
GO:GO:0001875 GO:GO:0032497 GO:GO:0010572 GO:GO:0032707
GO:GO:0060729 GO:GO:0045359 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 CTD:7099 eggNOG:NOG249751
HOGENOM:HOG000037951 KO:K10160 OrthoDB:EOG4P8FHQ GO:GO:0032732
GO:GO:0070430 GO:GO:0070434 EMBL:AF057025 IPI:IPI00212570
RefSeq:NP_062051.1 UniGene:Rn.14534 ProteinModelPortal:Q9QX05
SMR:Q9QX05 STRING:Q9QX05 PRIDE:Q9QX05 GeneID:29260 KEGG:rno:29260
UCSC:RGD:3870 InParanoid:Q9QX05 NextBio:608584
Genevestigator:Q9QX05 GermOnline:ENSRNOG00000010522 Uniprot:Q9QX05
Length = 835
Score = 126 (49.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 47/176 (26%), Positives = 77/176 (43%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+++ +F +L+ L + + L KVT + F +L L+ LDISY +++ FD I
Sbjct: 410 ILMSANFMGLEELEYLDFQHSTLKKVTEFSVFLSLEKLLYLDISYTNT-KID---FDGIF 465
Query: 358 N---SLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
SL LK++GN+ + ++ I +G+F LQ LN+
Sbjct: 466 LGLISLNTLKMAGNSFKDNTLSNVFTNTTNLTFLDLSKCQLEQISRGVFDTLYRLQLLNM 525
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKN--IHKAAKNSFA 468
S NNL + Y+ L LD S N+ + K + PK+ + NS A
Sbjct: 526 SHNNLLFLDPSHYKQLYSLRTLDCSFNRIE--TSKGILQHFPKSLAVFNLTNNSVA 579
Score = 103 (41.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 103 NPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NP + F F L+ L ++ I I + G+ L L LT N I S +F
Sbjct: 63 NPLKILRSYSFTNFSQLQWLDLSRCEIETIEDKAWHGLNQLSTLVLTGNPIKSFSPGSFS 122
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA-PRXXXXXXXXXXXXXX 221
G+ NL+ L K+ S+ L L+ L++AHN I P
Sbjct: 123 GLTNLENLVAVETKMTSLEGFHIGQLISLKKLNVAHNLIHSFKLPEYFSNLTNLEHVDLS 182
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLE-NINPM 255
YN I I+ KD+Q L+ + L+ ++NP+
Sbjct: 183 YNYIQTIS---VKDLQFLRENPQVNLSLDLSLNPI 214
Score = 83 (34.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 32/134 (23%), Positives = 52/134 (38%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P S + L+L+ N + L Y+F LQ L L +IE+I + L+ L L L
Sbjct: 51 IPYSTKNLDLSFNPLKILRSYSFTNFSQLQWLDLSRCEIETIEDKAWHGLNQLSTLVLTG 110
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENIN-PMMY 257
N I +P + + + LK + + P +
Sbjct: 111 NPIKSFSPGSFSGLTNLENLVAVETKMTSLEGFHIGQLISLKKLNVAHNLIHSFKLPEYF 170
Query: 258 SILADLIYLDLGYN 271
S L +L ++DL YN
Sbjct: 171 SNLTNLEHVDLSYN 184
Score = 44 (20.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 13 SLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMC 56
SLDLS N I I + F+ I+ L ++T+ S+ MC
Sbjct: 206 SLDLSLNPIDSIQAQAFQGIR----LHELTLRSNFNSSNVLKMC 245
Score = 42 (19.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQ 33
++ L+ +DLSYN I I+ KD+Q
Sbjct: 173 LTNLEHVDLSYNYIQTIS---VKDLQ 195
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 178 (67.7 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 69/257 (26%), Positives = 102/257 (39%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
FQ L LH+ N+ I +G H F G+ SL L+L HN + + + LQEL
Sbjct: 205 FQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNELQEF-PVAIRTLGRLQELGF 263
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXX-XXXXXXXXXYNDIVEINPE 231
N I++IP F+ L+ + N I + +DI E P+
Sbjct: 264 HNNNIQTIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFRHLPRLHTLSLNGASDIQEF-PD 322
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+ K L+ GL+ + P M L L L+L +NQ
Sbjct: 323 L-KGTTSLEILTLTRAGLQRLPPGMCQQLPRLQVLELSHNQIQGLPSLHRCQKLEKIGLQ 381
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N I +FS LQ L L N + + AF L L++LD+++N+L L +A
Sbjct: 382 H--NRIWEIGADTFSQLTSLQALDLSWNAIRSIHPEAFATLRALVKLDLTHNQLTMLPLA 439
Query: 352 SFDPIENSLRDLKISGN 368
L LK+ GN
Sbjct: 440 GL----GGLVHLKLKGN 452
Score = 152 (58.6 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 69/287 (24%), Positives = 110/287 (38%)
Query: 56 CPYMCECALDDRGRYEIVC-RRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQ 114
CP C C +D C RG A P G + T L + S N L G +F+
Sbjct: 34 CPAPCRCQ-EDGFMLSADCSERGLSAVP---GDLHPLTAYLDL--SMNNLTELQPG-LFR 86
Query: 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
LEEL ++ + + I F G+ SL+ L L +N + + + +LQ L LD
Sbjct: 87 HLSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDA 146
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
N I +P F L LR L L N ++++ N I + F+
Sbjct: 147 NLISLVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQ 206
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
++ L + ++++ + L L LDL +N+
Sbjct: 207 NLSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNELQEFPVAIRTLGRLQELGFH-N 265
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
N+ I EK+F LQ + N + V +AF +L L L ++
Sbjct: 266 NNIQTIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFRHLPRLHTLSLN 312
Score = 54 (24.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+I F LQ L+LS N ++ IH + + L LDL+ N+
Sbjct: 387 EIGADTFSQLTSLQALDLSWNAIRSIHPEAFATLRALVKLDLTHNQ 432
Score = 49 (22.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 14 LDLSYNDIVEINPEIFKDI 32
LDLS N++ E+ P +F+ +
Sbjct: 70 LDLSMNNLTELQPGLFRHL 88
>MGI|MGI:2176887 [details] [associations]
symbol:Tlr8 "toll-like receptor 8" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003725
"double-stranded RNA binding" evidence=ISO] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=ISO] [GO:0009615 "response to virus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045078 "positive
regulation of interferon-gamma biosynthetic process" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0045089
"positive regulation of innate immune response" evidence=ISO]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=ISO] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=ISO] [GO:0045416
"positive regulation of interleukin-8 biosynthetic process"
evidence=ISO] [GO:0051607 "defense response to virus" evidence=ISO]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027175 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
MGI:MGI:2176887 GO:GO:0016021 GO:GO:0003677 GO:GO:0006954
GO:GO:0003727 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 GO:GO:0051607
GO:GO:0005622 GO:GO:0003725 GO:GO:0071260 GO:GO:0045089
GO:GO:0045416 GO:GO:0007249 GO:GO:0045078 InterPro:IPR026906
Pfam:PF13306 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0045356 HOGENOM:HOG000230468
HOVERGEN:HBG018601 CTD:51311 KO:K10170 OrthoDB:EOG47SSCZ
PANTHER:PTHR24365:SF2 EMBL:AY035890 EMBL:AL731735 EMBL:BC132054
IPI:IPI00122184 RefSeq:NP_573475.2 UniGene:Mm.196676
ProteinModelPortal:P58682 SMR:P58682 STRING:P58682
PhosphoSite:P58682 PRIDE:P58682 Ensembl:ENSMUST00000049023
Ensembl:ENSMUST00000112170 GeneID:170744 KEGG:mmu:170744
InParanoid:A2AHI9 NextBio:370310 Bgee:P58682 CleanEx:MM_TLR8
Genevestigator:P58682 GermOnline:ENSMUSG00000040522 Uniprot:P58682
Length = 1032
Score = 123 (48.4 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 45/163 (27%), Positives = 69/163 (42%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTT-------TAFTNLTNLIELDISYNKLDR 347
N + E+S L+ L NRL ++ + F +L NLI LD+SYN L +
Sbjct: 585 NGIYTLTEESELKSISLKELVFSGNRLDRLWNANDGKYWSIFKSLQNLIRLDLSYNNLQQ 644
Query: 348 LEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNP 407
+ +F + SL++L ISGN ++ + Y +P L K
Sbjct: 645 IPNGAFLNLPQSLQELLISGNKLRFFNWTLLQYFPHLHLLDLSRNELYF-LPNCLSKFAH 703
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKS 450
L+ L LS N+ + + L HLDLS N K ++ S
Sbjct: 704 SLETLLLSHNHFSHLPSGFLSEARNLVHLDLSFNTIKMINKSS 746
Score = 102 (41.0 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 131 AIGFHP--FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK-IESIPSSVFM- 186
+I HP F + L YLNL+ ++ ++ F+ + NL+EL+L+FN ++ I S F+
Sbjct: 270 SIHIHPLAFQSLTQLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYLVQEIASGAFLT 329
Query: 187 HLSDLRVLSLAHN 199
L L++L L+ N
Sbjct: 330 KLPSLQILDLSFN 342
Score = 102 (41.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 44/161 (27%), Positives = 75/161 (46%)
Query: 87 QMDLGTEVLKIVPSE-ENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVP-SLR 144
++DL + P+E +N ++T G + ++L L + ++ + I P G+P SL+
Sbjct: 91 KIDLNHNAKQQHPNENKNGMNITEGALLS-LRNLTVLLLEDNQLYTI---PA-GLPESLK 145
Query: 145 YLNLTHNNITSLLDYNFKGMMNLQELYLDFN---KIES---IPSSVFMHLSDLRVLSLAH 198
L+L NNI + N G+ NL+ LYL +N K + F +L L+VLSL+
Sbjct: 146 ELSLIQNNIFQVTKNNTFGLRNLERLYLGWNCYFKCNQTFKVEDGAFKNLIHLKVLSLSF 205
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQEL 239
N + + P+ I+ I E FK ++ L
Sbjct: 206 NNLFYVPPKLPSSLRKLFLSNAK---IMNITQEDFKGLENL 243
Score = 75 (31.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 40/149 (26%), Positives = 65/149 (43%)
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS--FDPIENSLR 361
+F S +L L L L + +T F NL+NL EL + +N L + E+AS F SL+
Sbjct: 277 AFQSLTQLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYLVQ-EIASGAFLTKLPSLQ 335
Query: 362 DLKISGN-----NIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK---MNPHLQFLN 413
L +S N +Q + + ++ K F+ P+L +N
Sbjct: 336 ILDLSFNFQYKEYLQFINISSNFSKLRSLKKLHLRGYVFRELKKKHFEHLQSLPNLATIN 395
Query: 414 LSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
L N ++ I +Q+ KL + LS N+
Sbjct: 396 LGINFIEKIDFKAFQNFSKLDVIYLSGNR 424
Score = 71 (30.1 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 113 FQQFQHLEELHIT-NSFIPAIGFHPFWG-VPSLRYLNLTHN-NITSLLDY-----NFKGM 164
F+ +L+ELH+ N + I F +PSL+ L+L+ N L + NF +
Sbjct: 302 FENLSNLKELHLEFNYLVQEIASGAFLTKLPSLQILDLSFNFQYKEYLQFINISSNFSKL 361
Query: 165 MNLQELYLDFNKIESIPSSVFMHLS---DLRVLSLAHNRISKL 204
+L++L+L + F HL +L ++L N I K+
Sbjct: 362 RSLKKLHLRGYVFRELKKKHFEHLQSLPNLATINLGINFIEKI 404
Score = 71 (30.1 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 38/142 (26%), Positives = 59/142 (41%)
Query: 305 FSSQFKLQVLCLKRNRLAKVTTTAFTNLT-NLIELDISYNKLDRLEVASFDPIENSLRDL 363
F S L L L N L ++ AF NL +L EL IS NKL + L L
Sbjct: 626 FKSLQNLIRLDLSYNNLQQIPNGAFLNLPQSLQELLISGNKLRFFNWTLLQYFPH-LHLL 684
Query: 364 KISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIH 423
+S N + ++ +++ +P G +L L+LS N ++ I+
Sbjct: 685 DLSRNELYFLPNCLSKFAHSLETLL-LSHNHFSHLPSGFLSEARNLVHLDLSFNTIKMIN 743
Query: 424 NLLYQSNIK--LTHLDLSRNKF 443
Q+ +K L+ L+L N F
Sbjct: 744 KSSLQTKMKTNLSILELHGNYF 765
Score = 63 (27.2 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 107 LTIGPIFQQFQHLEELHITNSFIPAIG---FHPFWGVPSLRYLNLTHNNITSLLDYN-FK 162
+ I F + + L++LH+ + F +P+L +NL N I + D+ F+
Sbjct: 352 INISSNFSKLRSLKKLHLRGYVFRELKKKHFEHLQSLPNLATINLGINFIEKI-DFKAFQ 410
Query: 163 GMMNLQELYLDFNKIESI 180
L +YL N+I S+
Sbjct: 411 NFSKLDVIYLSGNRIASV 428
Score = 62 (26.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 40/162 (24%), Positives = 67/162 (41%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN-----NIT-SLLDYNFKGMMNLQEL 170
+ L+EL + + I + + +G+ +L L L N N T + D FK +++L+ L
Sbjct: 142 ESLKELSLIQNNIFQVTKNNTFGLRNLERLYLGWNCYFKCNQTFKVEDGAFKNLIHLKVL 201
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
L FN + +P + S LR L L++ +I + N P
Sbjct: 202 SLSFNNLFYVPPKL---PSSLRKLFLSNAKIMNITQEDFKGLENLTLLDLSGNC-----P 253
Query: 231 EIFKDIQELKTFKCRSCGLEN----INPMMYSILADLIYLDL 268
+ F C C EN I+P+ + L L+YL+L
Sbjct: 254 RCYN-----APFPCTPCK-ENSSIHIHPLAFQSLTQLLYLNL 289
Score = 49 (22.3 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
S L+ L LS I+ I E FK +++ T+L
Sbjct: 217 SSLRKLFLSNAKIMNITQEDFKGLENLTLL 246
Score = 49 (22.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 12 KSLDLSYNDIVEINPEIFKDIQDTTML 38
K+LDLS N+I I F+ QD L
Sbjct: 475 KALDLSLNNIFIIGKSQFEGFQDIACL 501
Score = 48 (22.0 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 99 PSEENPNHLTIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLL 157
P +EN + + I P+ FQ L L+++++ + I F + +L+ L+L N + +
Sbjct: 264 PCKENSS-IHIHPLAFQSLTQLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYLVQEI 322
Query: 158 DYN--FKGMMNLQELYLDFN 175
+ +LQ L L FN
Sbjct: 323 ASGAFLTKLPSLQILDLSFN 342
Score = 39 (18.8 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 11 LKSLDLSYNDIVEINPEI 28
LK L LS+N++ + P++
Sbjct: 198 LKVLSLSFNNLFYVPPKL 215
>UNIPROTKB|Q3MHH9 [details] [associations]
symbol:ECM2 "Extracellular matrix protein 2" species:9913
"Bos taurus" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001007
Pfam:PF00093 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51450
SMART:SM00214 GO:GO:0005578 eggNOG:COG4886 HSSP:P21809
EMBL:BC105232 IPI:IPI00692442 RefSeq:NP_001029769.1
UniGene:Bt.42321 ProteinModelPortal:Q3MHH9 GeneID:533916
KEGG:bta:533916 CTD:1842 HOGENOM:HOG000112319 HOVERGEN:HBG031529
InParanoid:Q3MHH9 KO:K08119 OrthoDB:EOG4868CR NextBio:20876193
Uniprot:Q3MHH9
Length = 680
Score = 178 (67.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES--IPSSVFMHLSDLRVLSLAH 198
P + L L N+ITS+ D F G+ NL+ L L N I S I F L +L L++
Sbjct: 324 PEITSLELIDNSITSIPDEAFNGLPNLERLDLSKNNITSSGIGPKAFKFLKNLMRLNMDG 383
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE--NINPMM 256
N + + N + I+ E D+ +L T + L N+N +
Sbjct: 384 NNLVTIPSELPSTLEELKINE---NKLQVIDEESLSDLNQLVTLELEGNNLSETNVNSLA 440
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L L YL LG N+ N I E SF+ K+ V+ L
Sbjct: 441 FKPLKSLSYLRLGRNKFRIIPQGLPASIEELYLE---NNQIEEITEISFNHTRKINVIGL 497
Query: 317 KRNRLA--KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
+ N++ ++ A+ N NL +D+SYNKL V S+ P SL L + GN I+
Sbjct: 498 RYNKIEENRIAPLAWINQENLESIDLSYNKL--YHVPSYLP--KSLVHLVLIGNQIE 550
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 79/349 (22%), Positives = 135/349 (38%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITS--LLDYNFKGMMNLQELYLDFNK 176
+ L + ++ I +I F G+P+L L+L+ NNITS + FK + NL L +D N
Sbjct: 326 ITSLELIDNSITSIPDEAFNGLPNLERLDLSKNNITSSGIGPKAFKFLKNLMRLNMDGNN 385
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE--INPEIFK 234
+ +IPS + L +L++ N++ + N++ E +N FK
Sbjct: 386 LVTIPSELPSTLEELKI---NENKLQVIDEESLSDLNQLVTLELEGNNLSETNVNSLAFK 442
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
++ L + G + + A + L L NQ
Sbjct: 443 PLKSLSYLRL---GRNKFRIIPQGLPASIEELYLENNQIEEITEISFNHTRKINVIGLRY 499
Query: 295 NHFPV--ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N I ++ +Q L+ + L N+L V + +L +L+ + N+++R+
Sbjct: 500 NKIEENRIAPLAWINQENLESIDLSYNKLYHVPSYLPKSLVHLVLIG---NQIERIPGYV 556
Query: 353 FDPIENSLRDLKISGNN-IQXXXXXXXXXXXXXXXXXXIADMN-YTDIPKGLFKMNPHLQ 410
F +E L L +S N + D N IP G+ +M L
Sbjct: 557 FGHMEPGLEYLYLSFNKLVDDGIDRVSFYGAYHSLRELFLDHNELKSIPPGVQEMKA-LH 615
Query: 411 FLNLSGNNLQDIH-----NLLYQSNIKLTHLDLSRNKFKGFDEKSYIMS 454
FL L+ N +++I N + L HL L N K + SY S
Sbjct: 616 FLRLNNNKIRNILPEQICNAEEDDDSNLQHLHLENNYIKTREIPSYAFS 664
>UNIPROTKB|P58727 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9685 "Felis
catus" [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0042116 "macrophage activation" evidence=ISS]
[GO:0046696 "lipopolysaccharide receptor complex" evidence=ISS]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045087 GO:GO:0005622 GO:GO:0042116
InterPro:IPR025875 Pfam:PF12799 GO:GO:0004888 GO:GO:0046696
SUPFAM:SSF52200 GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 CTD:7099 EMBL:AB060687 RefSeq:NP_001009223.1
ProteinModelPortal:P58727 SMR:P58727 GeneID:493698 KEGG:fca:493698
Uniprot:P58727
Length = 833
Score = 128 (50.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 40/172 (23%), Positives = 81/172 (47%)
Query: 76 RGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIG-F 134
R D + + DLGT LK + N N +TI F + LE L +S + + F
Sbjct: 382 RNDFSLKSCCSERDLGTTRLKHLDLSFN-NIITISSNFLGLEQLEYLDFQHSSLKQVSDF 440
Query: 135 HPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES--IPSSVFMHLSDLR 192
F + +LRYL++++ + F G+++LQ L + N + +P+ +FM L++L
Sbjct: 441 SVFLPLKNLRYLDISYTHTQVAFHGIFNGLISLQILKMAGNSFQDNFLPN-IFMELTNLT 499
Query: 193 VLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKC 244
+L L+ ++ +++ +N ++ ++ ++ + L+T C
Sbjct: 500 ILDLSDCQLEQVSQVAFNSLPKLQLLNMSHNHLLSLDTLPYEPLHSLQTLDC 551
Score = 127 (49.8 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 49/176 (27%), Positives = 77/176 (43%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+ + +F +L+ L + + L +V+ + F L NL LDISY +VA F I
Sbjct: 412 ITISSNFLGLEQLEYLDFQHSSLKQVSDFSVFLPLKNLRYLDISYT---HTQVA-FHGIF 467
Query: 358 N---SLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
N SL+ LK++GN+ Q ++D + + F P LQ LN+
Sbjct: 468 NGLISLQILKMAGNSFQDNFLPNIFMELTNLTILDLSDCQLEQVSQVAFNSLPKLQLLNM 527
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKA--AKNSFA 468
S N+L + L Y+ L LD S N+ E+ + P N+ +N FA
Sbjct: 528 SHNHLLSLDTLPYEPLHSLQTLDCSFNRIVASKEQE-LRHFPSNLSSLNLTRNDFA 582
Score = 123 (48.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 53/193 (27%), Positives = 91/193 (47%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTML-FQVTIFLYLLHSSASVMCPYMCECALDDR 67
++LK LDLS+N+I+ I+ F ++ L FQ + + S SV P LD
Sbjct: 399 TRLKHLDLSFNNIITISSN-FLGLEQLEYLDFQHSSLKQV--SDFSVFLPLKNLRYLDIS 455
Query: 68 GRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNS 127
+ V G + N G + L ++LK+ + N L IF + +L L +++
Sbjct: 456 YTHTQVAFHG-IFN----GLISL--QILKMAGNSFQDNFLP--NIFMELTNLTILDLSDC 506
Query: 128 FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMH 187
+ + F +P L+ LN++HN++ SL ++ + +LQ L FN+I + H
Sbjct: 507 QLEQVSQVAFNSLPKLQLLNMSHNHLLSLDTLPYEPLHSLQTLDCSFNRIVASKEQELRH 566
Query: 188 L-SDLRVLSLAHN 199
S+L L+L N
Sbjct: 567 FPSNLSSLNLTRN 579
Score = 101 (40.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 46/178 (25%), Positives = 69/178 (38%)
Query: 88 MDLGT-EVLKIVPSEENPNHLTIGPI-------FQQFQHLEELHITNSFIPAIGFHPFWG 139
MDL ++ +PS ++ P+ F F L+ L ++ I I + G
Sbjct: 41 MDLNLHKIPDNIPSSTKDLDMSFNPLRNLGSHSFSNFPELQVLDLSRCEIQIIEDDAYQG 100
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
+ L L LT N I L F G+ +LQ L I S+ HL L+ L++AHN
Sbjct: 101 LNHLSILILTGNPIQRLFPGAFSGLSSLQTLVAVETNIASLEDFPIGHLKTLKELNVAHN 160
Query: 200 RISKLA-PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE-NINPM 255
I P N I I KD+Q L + L+ ++NP+
Sbjct: 161 LIHSFKLPEYFSNMSNLEYLDLSNNKIQNI---YHKDLQVLHQKPLLNLSLDLSLNPL 215
Score = 79 (32.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 36/145 (24%), Positives = 64/145 (44%)
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRL-EVASFDPIENSLRDLKISGN 368
+L+ L L N + +++ F L L LD ++ L ++ + + F P++N LR L IS
Sbjct: 400 RLKHLDLSFNNIITISSN-FLGLEQLEYLDFQHSSLKQVSDFSVFLPLKN-LRYLDISYT 457
Query: 369 NIQXXXXXXXXXXXXXXXXXXIADMNYTD--IPKGLFKMNPHLQFLNLSGNNLQDIHNLL 426
+ Q +A ++ D +P +F +L L+LS L+ + +
Sbjct: 458 HTQVAFHGIFNGLISLQILK-MAGNSFQDNFLPN-IFMELTNLTILDLSDCQLEQVSQVA 515
Query: 427 YQSNIKLTHLDLSRNKFKGFDEKSY 451
+ S KL L++S N D Y
Sbjct: 516 FNSLPKLQLLNMSHNHLLSLDTLPY 540
Score = 62 (26.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 26/132 (19%), Positives = 51/132 (38%)
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
VP++ Y N+ + D N + ++L + FN + ++ S F + +L+VL L+
Sbjct: 33 VPNITY-QCMDLNLHKIPD-NIPS--STKDLDMSFNPLRNLGSHSFSNFPELQVLDLSRC 88
Query: 200 RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSI 259
I + N I + P F + L+T + ++
Sbjct: 89 EIQIIEDDAYQGLNHLSILILTGNPIQRLFPGAFSGLSSLQTLVAVETNIASLEDFPIGH 148
Query: 260 LADLIYLDLGYN 271
L L L++ +N
Sbjct: 149 LKTLKELNVAHN 160
Score = 47 (21.6 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 13 SLDLSYNDIVEINPEIFKDIQ 33
SLDLS N + I P FK+++
Sbjct: 207 SLDLSLNPLDFIQPGAFKEVK 227
Score = 42 (19.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 3 FTLIFMSKLKSLDLSYND 20
FT + + L+ LDLS ND
Sbjct: 367 FTQVKLESLEFLDLSRND 384
Score = 42 (19.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQ 33
MS L+ LDLS N I I KD+Q
Sbjct: 174 MSNLEYLDLSNNKIQNI---YHKDLQ 196
Score = 41 (19.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
S K LD+S+N + + F + + +L
Sbjct: 54 SSTKDLDMSFNPLRNLGSHSFSNFPELQVL 83
>UNIPROTKB|O75473 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G-protein
coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=TAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0005887
GO:GO:0004930 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0048839
GO:GO:0016500 InterPro:IPR026906 Pfam:PF13306 HOVERGEN:HBG031675
HOGENOM:HOG000231829 EMBL:AF062006 EMBL:AF061444 EMBL:AC078860
EMBL:AC090116 EMBL:BC096324 EMBL:BC096325 EMBL:BC096326
EMBL:BC099650 IPI:IPI00021131 IPI:IPI00940760 PIR:JE0176
RefSeq:NP_003658.1 UniGene:Hs.658889 ProteinModelPortal:O75473
SMR:O75473 STRING:O75473 PhosphoSite:O75473 PRIDE:O75473
Ensembl:ENST00000266674 Ensembl:ENST00000540815 GeneID:8549
KEGG:hsa:8549 UCSC:uc001swl.3 UCSC:uc001swm.3 CTD:8549
GeneCards:GC12P071833 HGNC:HGNC:4504 HPA:HPA012530 MIM:606667
neXtProt:NX_O75473 PharmGKB:PA28894 InParanoid:O75473 KO:K04308
OMA:FNPHFKE OrthoDB:EOG46143B PhylomeDB:O75473 GenomeRNAi:8549
NextBio:32032 ArrayExpress:O75473 Bgee:O75473 CleanEx:HS_LGR5
Genevestigator:O75473 GermOnline:ENSG00000139292 Uniprot:O75473
Length = 907
Score = 187 (70.9 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 89/393 (22%), Positives = 150/393 (38%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMA-NPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQ 114
CP C C D R + C D+ + +P + + T L + S N + L P+
Sbjct: 34 CPTHCHCEPDGRMLLRVDC--SDLGLSELP-SNLSVFTSYLDL--SMNNISQLLPNPL-P 87
Query: 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
+ LEEL + + + I F G+ SL+ L L +N + + + + +LQ L LD
Sbjct: 88 SLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDA 147
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
N I +P S F L LR L L N ++++ + N I I F
Sbjct: 148 NHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFG 207
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
++ L + + ++ + L L LDL YN
Sbjct: 208 NLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLSNLKELGFHS- 266
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N+ I EK+F L + N + V +AF +L L L ++ ++ F
Sbjct: 267 NNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLN----GASQITEFP 322
Query: 355 PIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT---DIPKGLFKMNPHL 409
+ + L L ++G I + D++Y D+P F + L
Sbjct: 323 DLTGTANLESLTLTGAQISSLPQTVCNQLPNLQ----VLDLSYNLLEDLPS--FSVCQKL 376
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
Q ++L N + +I +Q + L L+L+ NK
Sbjct: 377 QKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNK 409
Score = 143 (55.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 62/258 (24%), Positives = 101/258 (39%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F L LH+ N+ I ++G F G+ SL L+L +NN+ + + NL+EL
Sbjct: 206 FGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEF-PTAIRTLSNLKELGF 264
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXX-XXXXXXXXXYNDIVEINPE 231
N I SIP F+ L + N I + + I E P+
Sbjct: 265 HSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEF-PD 323
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+ L++ + ++ + + L +L LDL YN
Sbjct: 324 L-TGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSVCQKLQKIDLR 382
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N I +F L+ L L N++A + AF+ L +LI+LD+S N L +
Sbjct: 383 H--NEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPIT 440
Query: 352 SFDPIENSLRDLKISGNN 369
+ L LK++GN+
Sbjct: 441 GL----HGLTHLKLTGNH 454
Score = 138 (53.6 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 65/268 (24%), Positives = 111/268 (41%)
Query: 105 NHLTIGPI--FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N LT P+ F+ L+ + + + I I + F + SL L+L +N I SL F
Sbjct: 172 NALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFD 231
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
G+ +L+ L L++N ++ P+++ LS+L+ L N I + +
Sbjct: 232 GLHSLETLDLNYNNLDEFPTAI-RTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYD 290
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I + F+ + EL+T P + A+L L L Q
Sbjct: 291 NPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLTGT-ANLESLTLTGAQISSLPQTVCN 349
Query: 283 XXXXXXXXXXXGNHFPVILEK--SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340
N +LE SFS KLQ + L+ N + ++ F L +L L++
Sbjct: 350 QLPNLQVLDLSYN----LLEDLPSFSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNL 405
Query: 341 SYNKLDRLEVASFDPIENSLRDLKISGN 368
++NK+ + +F + SL L +S N
Sbjct: 406 AWNKIAIIHPNAFSTLP-SLIKLDLSSN 432
Score = 38 (18.4 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 448 EKSYIMSEPKNIHKAAKNSFALQSSMGKNAEYAVFIASSSISY 490
+++Y+ + K+ + NS ++ + + V SSSI+Y
Sbjct: 836 KQTYVWTRSKHPSLMSINSDDVEKQSCDSTQALVTFTSSSITY 878
>UNIPROTKB|G3MXX5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:DAAA02045821
Ensembl:ENSBTAT00000065527 Uniprot:G3MXX5
Length = 473
Score = 175 (66.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 52/202 (25%), Positives = 86/202 (42%)
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN-DIV 226
Q ++L N+I +P++ F +L +L L N ++ + N +
Sbjct: 60 QRVFLHGNRIAYVPAASFRACRNLTILWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLR 119
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
++P F+ + L T CGL + P ++ LA L YL L N
Sbjct: 120 AVDPATFRGLGRLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNGLQALPDDAFSDLGN 179
Query: 287 XXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
GNH P + E++F L L L +NR+A+V AF +L L+ L + N L
Sbjct: 180 LTHLFLHGNHIPSVPERAFRGLHSLDRLLLHQNRVARVHPHAFRDLGRLMTLYLFANNLS 239
Query: 347 RLEVASFDPIENSLRDLKISGN 368
L + P+ SL+ L+++ N
Sbjct: 240 ALSAEALAPLR-SLQYLRLNDN 260
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 38/151 (25%), Positives = 66/151 (43%)
Query: 91 GTEVLKIVPSEENPNHLTIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
G +L+ + +N + P F+ L LH+ + +G F G+ +L+YL L
Sbjct: 103 GLALLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLRELGPGLFRGLAALQYLYLQ 162
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
N + +L D F + NL L+L N I S+P F L L L L NR++++ P
Sbjct: 163 DNGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLHSLDRLLLHQNRVARVHPHAF 222
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
N++ ++ E ++ L+
Sbjct: 223 RDLGRLMTLYLFANNLSALSAEALAPLRSLQ 253
Score = 129 (50.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 41/154 (26%), Positives = 67/154 (43%)
Query: 119 LEELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKI 177
LE+L ++ N+ + A+ F G+ L L+L + L F+G+ LQ LYL N +
Sbjct: 107 LEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNGL 166
Query: 178 ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQ 237
+++P F L +L L L N I + R N + ++P F+D+
Sbjct: 167 QALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLHSLDRLLLHQNRVARVHPHAFRDLG 226
Query: 238 ELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
L T + L ++ + L L YL L N
Sbjct: 227 RLMTLYLFANNLSALSAEALAPLRSLQYLRLNDN 260
>WB|WBGene00009647 [details] [associations]
symbol:F43C1.1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001932 Pfam:PF00481 PROSITE:PS51450
SMART:SM00332 GO:GO:0046872 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0008152 GO:GO:0004721 InterPro:IPR025875
Pfam:PF12799 Gene3D:3.60.40.10 SUPFAM:SSF81606
GeneTree:ENSGT00440000037833 EMBL:Z46937 KO:K16340 PIR:T22117
RefSeq:NP_497845.2 UniGene:Cel.10485 ProteinModelPortal:Q09564
SMR:Q09564 STRING:Q09564 EnsemblMetazoa:F43C1.1 GeneID:185690
KEGG:cel:CELE_F43C1.1 UCSC:F43C1.1 CTD:185690 WormBase:F43C1.1
HOGENOM:HOG000021823 InParanoid:Q09564 OMA:RPRIRAK NextBio:929154
Uniprot:Q09564
Length = 1036
Score = 126 (49.4 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 38/137 (27%), Positives = 70/137 (51%)
Query: 69 RYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPI-FQQFQHLEELHITNS 127
R ++ R + P+G +D V + + + N + PI HL +L+++++
Sbjct: 171 RNSLISRPPTEKSMAPLGYIDDLYRVHSLQVIDLSANQILSFPIQLTLLSHLRQLNLSSN 230
Query: 128 FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMH 187
+I ++ + L+YLNL++N + +L D + + NLQ L + FN+ IP +F H
Sbjct: 231 YISSVPSECS-NMRRLQYLNLSNNQLDTLPD-SISELQNLQSLDISFNQFSQIPPCLF-H 287
Query: 188 LSDLRVLSLAHNRISKL 204
L+ L + LA N I K+
Sbjct: 288 LT-LEMWRLAGNNIEKI 303
Score = 104 (41.7 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 39/171 (22%), Positives = 79/171 (46%)
Query: 306 SSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKI 365
SS +LQ+L N L + + N+ +L +D+S+N+L+ + ++ +E L DL +
Sbjct: 507 SSFCRLQILRCANNYLTENSVPVIVNMKHLKIIDLSHNRLNSFDDSALSSLE-LLEDLNL 565
Query: 366 SGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNL 425
S N + + + +P+ F+ + L +++S NN+ + L
Sbjct: 566 SSNRLTRLADCLALLPCLQVLRAHSNQLVH--VPE--FRASNQLHTIDVSSNNIS-LGTL 620
Query: 426 LYQSNIKLTHLDLSRNK--F--KGFDEKSYIMSEPK--NIHKAAKNSFALQ 470
+++ L H D++ N F + F E + + S+ NI + ++N F Q
Sbjct: 621 QFKAPPNLRHFDVTCNSGDFDTENFPENAKMHSKMNTINISEGSQNLFGFQ 671
Score = 49 (22.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 396 TDIPKGLFKMNPHLQFLNLSGNNLQ 420
+ +PK F + P L+ LN+S N ++
Sbjct: 475 SSLPKHFFSILPRLRQLNISSNFIE 499
>WB|WBGene00002282 [details] [associations]
symbol:let-4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0002064
"epithelial cell development" evidence=IMP] [GO:0035150 "regulation
of tube size" evidence=IMP] [GO:0045177 "apical part of cell"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0002119 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0045177 GO:GO:0040011
GO:GO:0040018 GO:GO:0002064 GeneTree:ENSGT00700000104286
GO:GO:0035150 EMBL:Z79598 EMBL:JQ292907 RefSeq:NP_510425.2
ProteinModelPortal:Q93373 SMR:Q93373 STRING:Q93373
EnsemblMetazoa:C44H4.2 GeneID:181554 KEGG:cel:CELE_C44H4.2
CTD:181554 WormBase:C44H4.2 HOGENOM:HOG000018354 OMA:PLVCTEN
Uniprot:Q93373
Length = 773
Score = 178 (67.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 56/203 (27%), Positives = 84/203 (41%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L L++ + I + F VPSLRYL L+ N IT L Y F+ L+ L L N+I
Sbjct: 234 LNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIG 293
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
+IP++ L LR L LAHN+IS ++ N++ + I +
Sbjct: 294 AIPANSLSGLKQLRQLYLAHNKISNISSNAFTNSSIVVLVLSS-NELKTLTAGIISGLPN 352
Query: 239 LKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFP 298
L+ R ++ IN + A L+ LDL NQ N P
Sbjct: 353 LQQVSFRDNQIKTINRNAFYDAASLVMLDLAKNQLTEIAPTTFLAQLNLLLVDLSENKLP 412
Query: 299 VILEKSFSSQFKLQVLCLKRNRL 321
+F+S ++ + LK N L
Sbjct: 413 KTPYSAFNS--RVGTVLLKENPL 433
Score = 176 (67.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 64/303 (21%), Positives = 124/303 (40%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN-FKGMMNLQELYLDFNKI 177
LEE+ + ++ I + G+P+L L+L++N+I + + F + L ++ L NKI
Sbjct: 112 LEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLGSNKI 171
Query: 178 ESIPSSVFMHLSD-LRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
SI +S F ++ + ++ ++L HN ++ + N I +++ F ++
Sbjct: 172 FSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNL 231
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L + +N + + L YL L N+ N
Sbjct: 232 PVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNE 291
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
I S S +L+ L L N+++ +++ AFTN ++++ L +S N+L L +
Sbjct: 292 IGAIPANSLSGLKQLRQLYLAHNKISNISSNAFTN-SSIVVLVLSSNELKTLTAGIISGL 350
Query: 357 ENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSG 416
N L+ + N I+ +A T+I F +L ++LS
Sbjct: 351 PN-LQQVSFRDNQIKTINRNAFYDAASLVMLD-LAKNQLTEIAPTTFLAQLNLLLVDLSE 408
Query: 417 NNL 419
N L
Sbjct: 409 NKL 411
Score = 167 (63.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 55/243 (22%), Positives = 105/243 (43%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVP-SLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
IF L ++++ ++ I +I F V S++ +NL HNN+T++ +G+ LQ L
Sbjct: 154 IFPNLNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSL 213
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
+L N+IE + + F++L L +L+LA N+I +L + N I ++
Sbjct: 214 HLHKNRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTA 273
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
F+ ++L+ + + I S L L L L +N+
Sbjct: 274 YQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAFTNSSIVVLV 333
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
N + S LQ + + N++ + AF + +L+ LD++ N+L +
Sbjct: 334 LSS-NELKTLTAGIISGLPNLQQVSFRDNQIKTINRNAFYDAASLVMLDLAKNQLTEIAP 392
Query: 351 ASF 353
+F
Sbjct: 393 TTF 395
Score = 156 (60.0 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 53/243 (21%), Positives = 102/243 (41%)
Query: 113 FQQFQH-LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
FQ ++ ++ +++ ++ + A+ G+ L+ L+L N I L NF + L L
Sbjct: 179 FQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLN 238
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L N+I + F+++ LR L L+ N+I+KL N+I I
Sbjct: 239 LAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPAN 298
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+++L+ + NI+ ++ + ++ L L N+
Sbjct: 299 SLSGLKQLRQLYLAHNKISNISSNAFTN-SSIVVLVLSSNELKTLTAGIISGLPNLQQVS 357
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N I +F L +L L +N+L ++ T F NL+ +D+S NKL + +
Sbjct: 358 FRDNQIKTINRNAFYDAASLVMLDLAKNQLTEIAPTTFLAQLNLLLVDLSENKLPKTPYS 417
Query: 352 SFD 354
+F+
Sbjct: 418 AFN 420
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 64/305 (20%), Positives = 123/305 (40%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMN-LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
+R L+L+ N I + D F G+ L+E+ L+ N IE +P++ L +L L L++N I
Sbjct: 87 IRRLDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSI 146
Query: 202 SKLAPRXXX-XXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSI- 259
++ + N I I+ F++++ + + + G N+ + S
Sbjct: 147 VEIQEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNVKN--SIQTINLGHNNMTAVPSSAI 204
Query: 260 --LADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLK 317
L L L L N+ GN + ++F + L+ L L
Sbjct: 205 RGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLS 264
Query: 318 RNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXX 377
N++ K+T F L LD++ N++ + S ++ LR L ++ N I
Sbjct: 265 GNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQ-LRQLYLAHNKISNISSNA 323
Query: 378 XXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLD 437
++ + G+ P+LQ ++ N ++ I+ + L LD
Sbjct: 324 FTNSSIVVLVLSSNELK--TLTAGIISGLPNLQQVSFRDNQIKTINRNAFYDAASLVMLD 381
Query: 438 LSRNK 442
L++N+
Sbjct: 382 LAKNQ 386
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 53/236 (22%), Positives = 87/236 (36%)
Query: 105 NHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N++T P + + L+ LH+ + I + F +P L LNL N I L F
Sbjct: 194 NNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQAFL 253
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
+ +L+ LYL NKI + + F L +L L +N I + +
Sbjct: 254 NVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAH 313
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N I I+ F + + S L+ + + S L +L + NQ
Sbjct: 314 NKISNISSNAFTN-SSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQIKTINRNAFY 372
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIEL 338
N I +F +Q L ++ L N+L K +AF + + L
Sbjct: 373 DAASLVMLDLAKNQLTEIAPTTFLAQLNLLLVDLSENKLPKTPYSAFNSRVGTVLL 428
Score = 138 (53.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 68/279 (24%), Positives = 112/279 (40%)
Query: 8 MSKLKSLDLSYNDIVEINP-EIFKDIQ---DTTM----LFQV--TIFLYLLHSSASVMCP 57
+ L LDLS N IVEI EIF ++ D + +F + + F + +S ++
Sbjct: 133 LPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINLG 192
Query: 58 YMCECALDDRGRYEIVCRRGDMANPIPIGQMD----LGTEVLKIVPSEENPNHLTIGPIF 113
+ A+ + + + I Q+D L VL ++ N H F
Sbjct: 193 HNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQAF 252
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
L L+++ + I + + F L L+LT+N I ++ + G+ L++LYL
Sbjct: 253 LNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLA 312
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIF 233
NKI +I S+ F + S + VL L+ N + L N I IN F
Sbjct: 313 HNKISNISSNAFTN-SSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQIKTINRNAF 371
Query: 234 KDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
D L L I P + +L+ +DL N+
Sbjct: 372 YDAASLVMLDLAKNQLTEIAPTTFLAQLNLLLVDLSENK 410
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 79/341 (23%), Positives = 135/341 (39%)
Query: 147 NLTHNNITSL-LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSD-LRVLSLAHNRISKL 204
+LT N + L NF + ++ L L NKI+ I + F ++ L + L HN I K+
Sbjct: 66 SLTMNQAELVELPPNFFSGLFIRRLDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKV 125
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINP-EIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
N IVEI EIF ++ +L S + +I+ + + +
Sbjct: 126 PAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNVKNS 185
Query: 264 IY-LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLA 322
I ++LG+N N + +F + L +L L N++
Sbjct: 186 IQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIH 245
Query: 323 KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXX 382
++ AF N+ +L L +S NK+ +L F E L L ++ N I
Sbjct: 246 ELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQ-LEMLDLTNNEI-GAIPANSLSGL 303
Query: 383 XXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQD-----IHNL--LYQSNIKLTH 435
+A ++I F N + L LS N L+ I L L Q + +
Sbjct: 304 KQLRQLYLAHNKISNISSNAFT-NSSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQ 362
Query: 436 LD-LSRNKFKGFDEKSYIMSE-PKN-IHKAAKNSFALQSSM 473
+ ++RN F +D S +M + KN + + A +F Q ++
Sbjct: 363 IKTINRNAF--YDAASLVMLDLAKNQLTEIAPTTFLAQLNL 401
>MGI|MGI:96824 [details] [associations]
symbol:Tlr4 "toll-like receptor 4" species:10090 "Mus
musculus" [GO:0000187 "activation of MAPK activity" evidence=IMP]
[GO:0001530 "lipopolysaccharide binding" evidence=ISO] [GO:0001875
"lipopolysaccharide receptor activity" evidence=ISO] [GO:0002218
"activation of innate immune response" evidence=IMP] [GO:0002224
"toll-like receptor signaling pathway" evidence=ISO] [GO:0002282
"microglial cell activation involved in immune response"
evidence=ISO] [GO:0002322 "B cell proliferation involved in immune
response" evidence=IMP] [GO:0002537 "nitric oxide production
involved in inflammatory response" evidence=IMP] [GO:0002758
"innate immune response-activating signal transduction"
evidence=ISO] [GO:0004872 "receptor activity" evidence=ISO]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006691 "leukotriene metabolic process"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0006955 "immune response" evidence=IEA] [GO:0006979 "response
to oxidative stress" evidence=ISO] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=NAS] [GO:0007252
"I-kappaB phosphorylation" evidence=ISO] [GO:0009617 "response to
bacterium" evidence=IMP] [GO:0009897 "external side of plasma
membrane" evidence=ISO] [GO:0009986 "cell surface" evidence=ISO]
[GO:0010572 "positive regulation of platelet activation"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IMP] [GO:0031663
"lipopolysaccharide-mediated signaling pathway"
evidence=ISO;IGI;IDA] [GO:0032496 "response to lipopolysaccharide"
evidence=ISO;IGI;IMP] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISO;TAS] [GO:0032609 "interferon-gamma production"
evidence=IGI] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IMP] [GO:0032700 "negative regulation of
interleukin-17 production" evidence=IMP] [GO:0032707 "negative
regulation of interleukin-23 production" evidence=IMP] [GO:0032715
"negative regulation of interleukin-6 production" evidence=IMP]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IMP] [GO:0032722 "positive regulation of
chemokine production" evidence=ISO;IDA] [GO:0032727 "positive
regulation of interferon-alpha production" evidence=IDA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IDA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IMP] [GO:0032732 "positive regulation of
interleukin-1 production" evidence=IDA] [GO:0032733 "positive
regulation of interleukin-10 production" evidence=IDA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IDA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=ISO;NAS;IDA;IMP] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=ISO] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IDA;IMP]
[GO:0032874 "positive regulation of stress-activated MAPK cascade"
evidence=IDA] [GO:0042116 "macrophage activation" evidence=ISO;ISS]
[GO:0042346 "positive regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042535 "positive regulation of tumor necrosis
factor biosynthetic process" evidence=ISO] [GO:0042742 "defense
response to bacterium" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IDA] [GO:0043388 "positive regulation of DNA binding"
evidence=ISO] [GO:0043548 "phosphatidylinositol 3-kinase binding"
evidence=ISO] [GO:0045084 "positive regulation of interleukin-12
biosynthetic process" evidence=ISO] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0045348 "positive regulation of MHC class II biosynthetic
process" evidence=IMP] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IMP] [GO:0045362
"positive regulation of interleukin-1 biosynthetic process"
evidence=NAS] [GO:0045368 "positive regulation of interleukin-13
biosynthetic process" evidence=NAS] [GO:0045410 "positive
regulation of interleukin-6 biosynthetic process" evidence=NAS]
[GO:0045416 "positive regulation of interleukin-8 biosynthetic
process" evidence=ISO] [GO:0045429 "positive regulation of nitric
oxide biosynthetic process" evidence=IMP] [GO:0045471 "response to
ethanol" evidence=ISO] [GO:0045576 "mast cell activation"
evidence=NAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0046330
"positive regulation of JNK cascade" evidence=IGI;IDA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050671
"positive regulation of lymphocyte proliferation" evidence=IMP]
[GO:0050727 "regulation of inflammatory response" evidence=IMP]
[GO:0050729 "positive regulation of inflammatory response"
evidence=ISO] [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=ISO] [GO:0050829 "defense response to
Gram-negative bacterium" evidence=IMP] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=ISO] [GO:0051770
"positive regulation of nitric-oxide synthase biosynthetic process"
evidence=IDA] [GO:0051930 "regulation of sensory perception of
pain" evidence=ISO] [GO:0052033 "pathogen-associated molecular
pattern dependent induction by symbiont of host innate immune
response" evidence=ISO] [GO:0060729 "intestinal epithelial
structure maintenance" evidence=IMP] [GO:0060907 "positive
regulation of macrophage cytokine production" evidence=IMP]
[GO:0070373 "negative regulation of ERK1 and ERK2 cascade"
evidence=IMP] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IDA] [GO:0070430 "positive regulation of
nucleotide-binding oligomerization domain containing 1 signaling
pathway" evidence=IDA] [GO:0070434 "positive regulation of
nucleotide-binding oligomerization domain containing 2 signaling
pathway" evidence=IDA] [GO:0070542 "response to fatty acid"
evidence=ISO] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IMP;IDA] [GO:0071223 "cellular response to lipoteichoic
acid" evidence=IMP] InterPro:IPR000157 InterPro:IPR017241
InterPro:IPR027168 Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104
SMART:SM00255 MGI:MGI:96824 GO:GO:0048471 GO:GO:0005887
GO:GO:0006979 GO:GO:0009897 GO:GO:0032689 GO:GO:0050829
GO:GO:0014823 GO:GO:0045471 GO:GO:0070542 GO:GO:0009636
GO:GO:0043123 GO:GO:0051930 GO:GO:0001666 GO:GO:0070374
GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0000187
GO:GO:0050729 GO:GO:0045121 GO:GO:0032868 GO:GO:0043065
GO:GO:0050731 GO:GO:0050727 GO:GO:0032720 GO:GO:0032715
GO:GO:0003009 GO:GO:0030890 GO:GO:0051092 GO:GO:0032570
GO:GO:0070373 GO:GO:0032757 GO:GO:0071260 GO:GO:0045429
GO:GO:0042116 GO:GO:0007250 GO:GO:0004888 GO:GO:0045416
GO:GO:0032729 GO:GO:0032760 GO:GO:0016064 GO:GO:0002224
GO:GO:0046696 GO:GO:0045576 GO:GO:0001530 GO:GO:0052033
GO:GO:0043388 GO:GO:0042535 GO:GO:0045348 GO:GO:0032735
GO:GO:0042346 GO:GO:0051770 GO:GO:0071223
GeneTree:ENSGT00700000104185 GO:GO:0032733 GO:GO:0060907
GO:GO:0032727 GO:GO:0002537 GO:GO:0002282 GO:GO:0032728
GO:GO:0007252 GO:GO:0032609 GO:GO:0045410 SUPFAM:SSF52200
GO:GO:0032700 GO:GO:0045084 GO:GO:0045368 GO:GO:0001875
GO:GO:0032497 PDB:2Z64 PDB:3VQ1 PDB:3VQ2 PDBsum:2Z64 PDBsum:3VQ1
PDBsum:3VQ2 GO:GO:0010572 GO:GO:0032707 GO:GO:0060729 GO:GO:0045359
HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9 CTD:7099 eggNOG:NOG249751
HOGENOM:HOG000037951 KO:K10160 OrthoDB:EOG4P8FHQ GO:GO:0032732
GO:GO:0070430 GO:GO:0070434 EMBL:AF095353 EMBL:AF110133
EMBL:AF185285 EMBL:AF177767 EMBL:AK014533 IPI:IPI00131730
RefSeq:NP_067272.1 UniGene:Mm.38049 ProteinModelPortal:Q9QUK6
SMR:Q9QUK6 DIP:DIP-38573N IntAct:Q9QUK6 STRING:Q9QUK6
PhosphoSite:Q9QUK6 PRIDE:Q9QUK6 Ensembl:ENSMUST00000048096
GeneID:21898 KEGG:mmu:21898 UCSC:uc008thv.1 InParanoid:Q9QUK6
OMA:TNIIQEG BindingDB:Q9QUK6 ChEMBL:CHEMBL1795167
EvolutionaryTrace:Q9QUK6 NextBio:301436 Bgee:Q9QUK6 CleanEx:MM_TLR4
Genevestigator:Q9QUK6 GermOnline:ENSMUSG00000039005 GO:GO:0045362
Uniprot:Q9QUK6
Length = 835
Score = 132 (51.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 46/165 (27%), Positives = 75/165 (45%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+I+ +F +LQ L + + L +VT +AF +L L+ LDISY +++ FD I
Sbjct: 410 IIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNT-KID---FDGIF 465
Query: 358 ---NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
SL LK++GN+ + ++ I G+F LQ LN+
Sbjct: 466 LGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNM 525
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNI 459
S NNL + + Y L+ LD S N+ + K + PK++
Sbjct: 526 SHNNLLFLDSSHYNQLYSLSTLDCSFNRIE--TSKGILQHFPKSL 568
Score = 95 (38.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 103 NPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NP + F F L+ L ++ I I + G+ L L LT N I S +F
Sbjct: 63 NPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFS 122
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI-SKLAPRXXXXXXXXXXXXXX 221
G+ +L+ L K+ S+ S L L+ L++AHN I S P
Sbjct: 123 GLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLS 182
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLE-NINPM 255
YN I I D+Q L+ + L+ ++NP+
Sbjct: 183 YNYIQTIT---VNDLQFLRENPQVNLSLDMSLNPI 214
Score = 37 (18.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 13 SLDLSYNDIVEINPEIFKDIQ 33
SLD+S N I I + F+ I+
Sbjct: 206 SLDMSLNPIDFIQDQAFQGIK 226
Score = 37 (18.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
S K++DLS+N + + F + + L
Sbjct: 53 SSTKNIDLSFNPLKILKSYSFSNFSELQWL 82
>ZFIN|ZDB-GENE-040426-1225 [details] [associations]
symbol:rxfp2b "relaxin/insulin-like family peptide
receptor 2b" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 ZFIN:ZDB-GENE-040426-1225
GO:GO:0016021 GO:GO:0004930 InterPro:IPR003591 SMART:SM00369
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 EMBL:EF685705
IPI:IPI00836966 UniGene:Dr.17695 ProteinModelPortal:E6Y2S3
ArrayExpress:E6Y2S3 Bgee:E6Y2S3 Uniprot:E6Y2S3
Length = 754
Score = 177 (67.4 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 58/230 (25%), Positives = 95/230 (41%)
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
++ +L+L +N I +L DY F +Q L+L N IE++ S F L L+ L L+ N I
Sbjct: 135 NVTWLSLKNNRIRNLDDYIFSKYTQMQRLFLQNNIIETVSSRAFSRLFTLQRLFLSQNNI 194
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI-NPMMYSIL 260
+ L P +N + I + F ++ L + L + N + +
Sbjct: 195 TYLGPGVFRDLHKLDWLVLDHNPLKHITRDTFIGLRSLTYLSMVNVSLMRLPNSSLCQHM 254
Query: 261 ADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNR 320
L +LD N N+ + E +F S L L L NR
Sbjct: 255 PLLTWLDFAENDVELLNYSTLMTCTELTVLTFHDNNIKTLPENTFHSLGSLAELDLSCNR 314
Query: 321 LAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
++K+ F +L L +L+IS+N L + FD + L+ L + G I
Sbjct: 315 ISKLPKNTFKSLKYLKKLNISHNPLLHIHTGHFDHLVQ-LQSLSLEGIEI 363
Score = 128 (50.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 51/226 (22%), Positives = 84/226 (37%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF ++ ++ L + N+ I + F + +L+ L L+ NNIT L F+ + L L
Sbjct: 153 IFSKYTQMQRLFLQNNIIETVSSRAFSRLFTLQRLFLSQNNITYLGPGVFRDLHKLDWLV 212
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY--NDIVEIN 229
LD N ++ I F+ L L LS+ + + +L P + ND+ +N
Sbjct: 213 LDHNPLKHITRDTFIGLRSLTYLSMVNVSLMRL-PNSSLCQHMPLLTWLDFAENDVELLN 271
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
EL ++ + + L L LDL N+
Sbjct: 272 YSTLMTCTELTVLTFHDNNIKTLPENTFHSLGSLAELDLSCNRISKLPKNTFKSLKYLKK 331
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNL 335
N I F +LQ L L+ + +TT F + NL
Sbjct: 332 LNISHNPLLHIHTGHFDHLVQLQSLSLEGIEIPNITTKMFLPMGNL 377
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 178 (67.7 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 85/399 (21%), Positives = 156/399 (39%)
Query: 51 SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIG 110
+A +C C C D R + C G +P G + T+ L++ ++ + H
Sbjct: 24 AAPPLCAAPCSCDGDRR----VDCS-GKGLTAVPEG-LSAFTQALQLAGNDLSFIH---P 74
Query: 111 PIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
+ L+ L + N+ + + G+ +L+ L L N+ITS+ + +F+G++ L+ L
Sbjct: 75 KALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHL 134
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
+LD N + +P +L L+ L+LA N+IS + N I ++
Sbjct: 135 WLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQ 194
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
F + L+T L P L L L N
Sbjct: 195 HCFDGLDNLETLDLNYNNLGEF-PQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTI 253
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELD---ISYNKLDR 347
N + +F + L L ++ + + F NLT + L+ ++ K+
Sbjct: 254 HLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ----QFPNLTGTVHLESLTLTGTKISS 309
Query: 348 LEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNP 407
+ + + LR L +S NNI+ + Y I +G F+
Sbjct: 310 IP-NNLCQEQKMLRTLDLSYNNIRDLPSFNGCHALEEISLQR--NQIY-QIKEGTFQGLI 365
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGF 446
L+ L+LS N + +IH+ + + +T+LD+S N+ F
Sbjct: 366 SLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSF 404
Score = 160 (61.4 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 76/326 (23%), Positives = 122/326 (37%)
Query: 135 HP--FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLR 192
HP G+ L+ L L +N + ++ +G+ LQ L LD N I S+P F L LR
Sbjct: 73 HPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLR 132
Query: 193 VLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI 252
L L N ++++ N I I F ++ L + + ++
Sbjct: 133 HLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSL 192
Query: 253 NPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQ 312
+ + L +L LDL YN N VI + +F L+
Sbjct: 193 SQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHS-NSISVIPDGAFDGNPLLR 251
Query: 313 VLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS--LRDLKISGNNI 370
+ L N L+ V +AF NL++L L I + V F + + L L ++G I
Sbjct: 252 TIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASM----VQQFPNLTGTVHLESLTLTGTKI 307
Query: 371 QXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSN 430
++ N D+P F L+ ++L N + I +Q
Sbjct: 308 SSIPNNLCQEQKMLRTLD-LSYNNIRDLPS--FNGCHALEEISLQRNQIYQIKEGTFQGL 364
Query: 431 IKLTHLDLSRNKFKGFDEKSYIMSEP 456
I L LDLSRN +++ P
Sbjct: 365 ISLRILDLSRNLIHEIHSRAFATLGP 390
Score = 125 (49.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 36/123 (29%), Positives = 56/123 (45%)
Query: 118 HLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKI 177
HLE L +T + I +I + LR L+L++NNI L +N G L+E+ L N+I
Sbjct: 296 HLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPSFN--GCHALEEISLQRNQI 353
Query: 178 ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQ 237
I F L LR+L L+ N I ++ R +N++ E +
Sbjct: 354 YQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLN 413
Query: 238 ELK 240
+LK
Sbjct: 414 QLK 416
Score = 45 (20.9 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFK 30
+ L++LDL+YN++ E P+ K
Sbjct: 200 LDNLETLDLNYNNLGEF-PQAIK 221
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 174 (66.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 60/245 (24%), Positives = 96/245 (39%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F +L L + N+ + + F + L L L N ++ L F+ + LQEL L
Sbjct: 118 FSSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDL 177
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
FN+I S+ + +F + S+LRVLSL N+I L N I + P
Sbjct: 178 SFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPGS 237
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
F LKT + LE + ++ L + YLDL N
Sbjct: 238 FP--ASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDL 295
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N + F F ++ + L++N L V + +L LD+S N L +
Sbjct: 296 SENRISTLAGSVFKGLFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNSLRSIPSGF 355
Query: 353 FDPIE 357
F+ ++
Sbjct: 356 FEDLD 360
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 49/221 (22%), Positives = 81/221 (36%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F LE L + + + + F + L+ L+L+ N I+SL F+ L+ L
Sbjct: 141 LFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLS 200
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
L NKI ++P +F HL L+ L+L N I L P N + ++
Sbjct: 201 LQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPGSFPASLKTLILKK--NLLEKLTNA 258
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+F + + L + ++ L L LDL N+
Sbjct: 259 VFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVY 318
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNL 332
N + Q LQ+L L N L + + F +L
Sbjct: 319 LQKNSLISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFFEDL 359
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 71/328 (21%), Positives = 124/328 (37%)
Query: 96 KIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITS 155
K+V S++ L + I Q + EL + S IP + F L L + + S
Sbjct: 32 KLVCSDDRMKSLPVN-ISTQ---VRELIVVASGIPDLDQQSFPETLRLSKLVFLNGMLKS 87
Query: 156 LLDYNFKGMMNLQELYLDFNKI-ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXX 214
+ F+ ++ L+EL + N S+ F L++L L L +N++S +
Sbjct: 88 VSGEAFERLVELRELEISGNICWMSLDIQTFSSLTNLTRLLLNNNKLSGVDAGLFHSLHQ 147
Query: 215 XXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXX 274
N + ++ +F+ + L+ + +++ ++ ++L L L N+
Sbjct: 148 LEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIP 207
Query: 275 XXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTN 334
N V+ SF + K L LK+N L K+T F L
Sbjct: 208 NLPDGIFTHLDHLQELNLRSNLIRVLTPGSFPASLK--TLILKKNLLEKLTNAVFHTLHY 265
Query: 335 LIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMN 394
+ LD+S N L + F + SL L +S N I + +
Sbjct: 266 ITYLDLSQNSLTEVPADLFQNLI-SLETLDLSENRISTLAGSVFKGLFSIKSVY-LQKNS 323
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNLQDI 422
+ L K LQ L+LS N+L+ I
Sbjct: 324 LISVDAHLLKDQHDLQLLDLSNNSLRSI 351
Score = 127 (49.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 72/345 (20%), Positives = 129/345 (37%)
Query: 43 IFLYLLHSSASVMCPYMCEC-------ALDDRGR---YEIVCRRGDM---ANPIPIGQMD 89
+ L L+H V CP C+C DDR + I + ++ A+ IP
Sbjct: 8 VLLVLIHLYCGVCCPEPCQCFSGSKLVCSDDRMKSLPVNISTQVRELIVVASGIPDLDQQ 67
Query: 90 LGTEVLKIVPSEENPNHL--TIGPIFQQFQHLEELHITNSFI-PAIGFHPFWGVPSLRYL 146
E L++ L G F++ L EL I+ + ++ F + +L L
Sbjct: 68 SFPETLRLSKLVFLNGMLKSVSGEAFERLVELRELEISGNICWMSLDIQTFSSLTNLTRL 127
Query: 147 NLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L +N ++ + F + L+ L L N + + +F L L+ L L+ N+IS L+
Sbjct: 128 LLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLST 187
Query: 207 RXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
N I + IF + L+ RS + + P + A L L
Sbjct: 188 ELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPGSFP--ASLKTL 245
Query: 267 DLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTT 326
L N N + F + L+ L L NR++ +
Sbjct: 246 ILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAG 305
Query: 327 TAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
+ F L ++ + + N L ++ A ++ L+ L +S N+++
Sbjct: 306 SVFKGLFSIKSVYLQKNSLISVD-AHLLKDQHDLQLLDLSNNSLR 349
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 49/218 (22%), Positives = 93/218 (42%)
Query: 228 INPEIFKDIQELKTFKCRS--CGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
++ E F+ + EL+ + C + +++ +S L +L L L N+
Sbjct: 88 VSGEAFERLVELRELEISGNICWM-SLDIQTFSSLTNLTRLLLNNNKLSGVDAGLFHSLH 146
Query: 286 XXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
GN + + F +LQ L L N+++ ++T F N + L L + NK+
Sbjct: 147 QLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANKI 206
Query: 346 DRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD-IPKGLFK 404
L F +++ L++L + N I+ I N + + +F
Sbjct: 207 PNLPDGIFTHLDH-LQELNLRSNLIRVLTPGSFPASLKTL----ILKKNLLEKLTNAVFH 261
Query: 405 MNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
++ +L+LS N+L ++ L+Q+ I L LDLS N+
Sbjct: 262 TLHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENR 299
>TAIR|locus:2085537 [details] [associations]
symbol:RLP34 "AT3G11010" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0006952
"defense response" evidence=ISS] [GO:0016301 "kinase activity"
evidence=ISS] [GO:0007165 "signal transduction" evidence=IC]
Pfam:PF00560 InterPro:IPR001611 EMBL:CP002686 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263 UniGene:At.22181
UniGene:At.39822 IPI:IPI00548025 RefSeq:NP_187712.2
ProteinModelPortal:F4J519 SMR:F4J519 EnsemblPlants:AT3G11010.1
GeneID:820272 KEGG:ath:AT3G11010 OMA:GNRFFGQ Uniprot:F4J519
Length = 894
Score = 170 (64.9 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 74/335 (22%), Positives = 123/335 (36%)
Query: 139 GVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES-IPSSVFMHLSDLRVLSLA 197
G+ +L L+L++N + + + + L LYL N IPSS F +L+ L L ++
Sbjct: 176 GLSNLTNLHLSYNKYSGQIPSSIGNLSQLIVLYLSVNNFYGEIPSS-FGNLNQLTRLDVS 234
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
N++ P N P + L F P
Sbjct: 235 FNKLGGNFPNVLLNLTGLSVVSLSNNKFTGTLPPNITSLSNLMAFYASDNAFTGTFPSFL 294
Query: 258 SILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG-NHFPVILEKSFSSQFKLQVLCL 316
I+ L YL L NQ G N+F + S S LQ L +
Sbjct: 295 FIIPSLTYLGLSGNQLKGTLEFGNISSPSNLQYLNIGSNNFIGPIPSSISKLINLQELGI 354
Query: 317 KR--NRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXX 374
+ V + F++L +L +L +SY +++ P +LR L +SGN +
Sbjct: 355 SHLNTQCRPVDFSIFSHLKSLDDLRLSYLTTTTIDLNDILPYFKTLRSLDLSGNLVSATN 414
Query: 375 XXXXXXX--XXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQ-DIHNLLYQSNI 431
++ TD P+ + + L FL++S N ++ + L+
Sbjct: 415 KSSVSSDPPSQSIQSLYLSGCGITDFPE-ILRTQHELGFLDVSNNKIKGQVPGWLWTLP- 472
Query: 432 KLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAAKNS 466
L +L+LS N F GF + EP + N+
Sbjct: 473 NLFYLNLSNNTFIGFQRPT--KPEPSMAYLLGSNN 505
Score = 135 (52.6 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 88/369 (23%), Positives = 140/369 (37%)
Query: 96 KIVPSEENPNHLT-IGPIFQQFQHLEELHITN-SFIPAIGF--HPFWG-VPS-------L 143
+I+ S N + LT + F QF I N S + +G + F+G +PS L
Sbjct: 97 QILNSIGNLSRLTSLDLSFNQFSGQIPSSIGNLSHLTFLGLSGNRFFGQIPSSIGNLSHL 156
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES-IPSSVFMHLSDLRVLSLAHNRIS 202
+L L+ N + G+ NL L+L +NK IPSS+ +LS L VL L+ N
Sbjct: 157 TFLGLSGNRFFGQFPSSIGGLSNLTNLHLSYNKYSGQIPSSIG-NLSQLIVLYLSVNNFY 215
Query: 203 KLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILAD 262
P +N + P + ++ L + P + L++
Sbjct: 216 GEIPSSFGNLNQLTRLDVSFNKLGGNFPNVLLNLTGLSVVSLSNNKFTGTLPPNITSLSN 275
Query: 263 LIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILE-KSFSSQFKLQVLCLKRNRL 321
L+ N GN LE + SS LQ L + N
Sbjct: 276 LMAFYASDNAFTGTFPSFLFIIPSLTYLGLSGNQLKGTLEFGNISSPSNLQYLNIGSNNF 335
Query: 322 AKVTTTAFTNLTNLIELDISY-NKLDR-LEVASFDPIENSLRDLKISGNNIQXXXXXXXX 379
++ + L NL EL IS+ N R ++ + F ++ SL DL++S
Sbjct: 336 IGPIPSSISKLINLQELGISHLNTQCRPVDFSIFSHLK-SLDDLRLSYLTTTTIDLNDIL 394
Query: 380 XXXXXXXXXXIADMNYTDIPKGLFKMNP---HLQFLNLSGNNLQDIHNLLYQSNIKLTHL 436
++ + K +P +Q L LSG + D +L ++ +L L
Sbjct: 395 PYFKTLRSLDLSGNLVSATNKSSVSSDPPSQSIQSLYLSGCGITDFPEIL-RTQHELGFL 453
Query: 437 DLSRNKFKG 445
D+S NK KG
Sbjct: 454 DVSNNKIKG 462
Score = 119 (46.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 74/304 (24%), Positives = 116/304 (38%)
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
H+N +S+ + +F + L + DF I SS+ +LS L L L++NR S
Sbjct: 49 HSN-SSIRNLHF--LTTLDRSHNDFEG--QITSSI-ENLSHLTSLDLSYNRFSGQILNSI 102
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSI--LADLIYLD 267
+N P ++ L TF S G + SI L+ L +L
Sbjct: 103 GNLSRLTSLDLSFNQFSGQIPSSIGNLSHL-TFLGLS-GNRFFGQIPSSIGNLSHLTFLG 160
Query: 268 LGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTT 327
L N+ N + + S + +L VL L N +
Sbjct: 161 LSGNRFFGQFPSSIGGLSNLTNLHLSYNKYSGQIPSSIGNLSQLIVLYLSVNNFYGEIPS 220
Query: 328 AFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG--NNIQXXXXXXXXXXXXXX 385
+F NL L LD+S+NKL +F + +L L + NN
Sbjct: 221 SFGNLNQLTRLDVSFNKLG----GNFPNVLLNLTGLSVVSLSNNKFTGTLPPNITSLSNL 276
Query: 386 XXXXIADMNYTD-IPKGLFKMNPHLQFLNLSGNNLQ---DIHNLLYQSNIKLTHLDLSRN 441
+D +T P LF + P L +L LSGN L+ + N+ SN++ +L++ N
Sbjct: 277 MAFYASDNAFTGTFPSFLFII-PSLTYLGLSGNQLKGTLEFGNISSPSNLQ--YLNIGSN 333
Query: 442 KFKG 445
F G
Sbjct: 334 NFIG 337
Score = 50 (22.7 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 434 THLDLSRNKFKGFDEKSYIMSEPKNIHKAAKNSFA--LQSSMG 474
T +D S NKF+G KS + + ++ + N+F + SS+G
Sbjct: 706 TAVDFSGNKFEGEIPKSIGLLKELHVLNLSNNAFTGHIPSSIG 748
Score = 45 (20.9 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+S+L SLDLS+N P ++ T L
Sbjct: 105 LSRLTSLDLSFNQFSGQIPSSIGNLSHLTFL 135
Score = 43 (20.2 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 8 MSKLKSLDLSYN 19
+S L SLDLSYN
Sbjct: 81 LSHLTSLDLSYN 92
>UNIPROTKB|C9JEE2 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0007610 "behavior"
evidence=IEA] [GO:0035418 "protein localization to synapse"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0007610 InterPro:IPR003591 SMART:SM00369
GO:GO:0050808 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
EMBL:AC016670 HGNC:HGNC:19408 IPI:IPI00916020
ProteinModelPortal:C9JEE2 SMR:C9JEE2 STRING:C9JEE2
Ensembl:ENST00000416268 ArrayExpress:C9JEE2 Bgee:C9JEE2
Uniprot:C9JEE2
Length = 223
Score = 159 (61.0 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 36/127 (28%), Positives = 65/127 (51%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L +N+++ L F G+M L LYLD N I S+ F L ++ L+L+ N+I++L
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLP 129
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN + + P++F +++L T R+ ++ + ++ L +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKF 189
Query: 266 LDLGYNQ 272
LD+GYNQ
Sbjct: 190 LDIGYNQ 196
Score = 134 (52.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/125 (24%), Positives = 63/125 (50%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+ G FQ+ + ++EL ++++ I + F +P+LR ++L++N + +L F
Sbjct: 99 NHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFH 158
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
G+ L L++ N I+ +P +F L+ L + +N++ LA +
Sbjct: 159 GLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH 218
Query: 223 NDIVE 227
ND+V+
Sbjct: 219 NDLVK 223
Score = 131 (51.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 37/135 (27%), Positives = 65/135 (48%)
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G+ L +L L HN+I S+ F+ + ++EL L N+I +P++ F + +LR + L
Sbjct: 85 FTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDL 144
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMM 256
++N++ LAP N I + IF+D + LK L+++
Sbjct: 145 SYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNS 204
Query: 257 YSILADLIYLDLGYN 271
++ L L L L +N
Sbjct: 205 FAGLFKLTELHLEHN 219
>UNIPROTKB|F1NY48 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
GO:GO:0016021 GO:GO:0030154 GO:GO:0004930 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007188
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 OMA:YTLTTRP
GeneTree:ENSGT00650000093266 EMBL:AADN02016502 IPI:IPI00603372
ProteinModelPortal:F1NY48 Ensembl:ENSGALT00000015353 Uniprot:F1NY48
Length = 755
Score = 176 (67.0 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 59/233 (25%), Positives = 98/233 (42%)
Query: 140 VPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
VPS + ++L N + L F+ +L+ LYL NKI ++ F L +L L L++
Sbjct: 121 VPSNITTMSLQKNLLRKLYADVFRKYQDLKNLYLQDNKIRAVSKHAFKGLYNLTKLYLSN 180
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI-NPMMY 257
N+I+ L PR N I I+P F ++ L + L ++ + +
Sbjct: 181 NKITNLKPRVFEDLHKLEWLIIENNRINRISPSTFYGLKSLILLDMMNNSLAHLPDKPLC 240
Query: 258 SILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLK 317
+ L +LDL N N + E SFSS L L L
Sbjct: 241 QYMPRLNWLDLEGNHIHHLRNVTFISCSTLTVLVMRQNKISSLNENSFSSLQMLDELDLA 300
Query: 318 RNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
N + + F +L L +L++SYN + ++++ FD + L+ L + G I
Sbjct: 301 SNEIESLPAYVFKDLKELSQLNLSYNPIKKIQIDQFDFL-TKLKSLSLEGIEI 352
Score = 157 (60.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 48/207 (23%), Positives = 89/207 (42%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ + L N + + + VF DL+ L L N+I ++ N I
Sbjct: 124 NITTMSLQKNLLRKLYADVFRKYQDLKNLYLQDNKIRAVSKHAFKGLYNLTKLYLSNNKI 183
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ P +F+D+ +L+ + + I+P + L LI LD+ N
Sbjct: 184 TNLKPRVFEDLHKLEWLIIENNRINRISPSTFYGLKSLILLDMMNNSLAHLPDKPLCQYM 243
Query: 286 XXXX-XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
GNH + +F S L VL +++N+++ + +F++L L ELD++ N+
Sbjct: 244 PRLNWLDLEGNHIHHLRNVTFISCSTLTVLVMRQNKISSLNENSFSSLQMLDELDLASNE 303
Query: 345 LDRLEVASFDPIENSLRDLKISGNNIQ 371
++ L F ++ L L +S N I+
Sbjct: 304 IESLPAYVFKDLKE-LSQLNLSYNPIK 329
Score = 147 (56.8 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 64/280 (22%), Positives = 112/280 (40%)
Query: 57 PYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQF 116
P C+C +G E+ C + + +P+ ++ T L ++N +F+++
Sbjct: 98 PVECKC----QG-LEVFCDAAKLRD-VPLVPSNITTMSL-----QKNLLRKLYADVFRKY 146
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
Q L+ L++ ++ I A+ H F G+ +L L L++N IT+L F+ + L+ L ++ N+
Sbjct: 147 QDLKNLYLQDNKIRAVSKHAFKGLYNLTKLYLSNNKITNLKPRVFEDLHKLEWLIIENNR 206
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY-NDIVEINPEIFKD 235
I I S F L L +L + +N ++ L + N I + F
Sbjct: 207 INRISPSTFYGLKSLILLDMMNNSLAHLPDKPLCQYMPRLNWLDLEGNHIHHLRNVTFIS 266
Query: 236 IQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGN 295
L R + ++N +S L L LDL N+ N
Sbjct: 267 CSTLTVLVMRQNKISSLNENSFSSLQMLDELDLASNEIESLPAYVFKDLKELSQLNLSYN 326
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNL 335
I F KL+ L L+ +A + F L NL
Sbjct: 327 PIKKIQIDQFDFLTKLKSLSLEGIEIANIQRRMFIPLRNL 366
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 42/157 (26%), Positives = 74/157 (47%)
Query: 300 ILEKSFSSQFK----LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDP 355
+L K ++ F+ L+ L L+ N++ V+ AF L NL +L +S NK+ L+ F+
Sbjct: 134 LLRKLYADVFRKYQDLKNLYLQDNKIRAVSKHAFKGLYNLTKLYLSNNKITNLKPRVFED 193
Query: 356 IENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIP-KGLFKMNPHLQFLNL 414
+ + L L I N I + + + +P K L + P L +L+L
Sbjct: 194 L-HKLEWLIIENNRINRISPSTFYGLKSLILLDMMNN-SLAHLPDKPLCQYMPRLNWLDL 251
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
GN++ + N+ + S LT L + +NK +E S+
Sbjct: 252 EGNHIHHLRNVTFISCSTLTVLVMRQNKISSLNENSF 288
>MGI|MGI:1341817 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein
coupled receptor 5" species:10090 "Mus musculus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1341817
GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH466539
GeneTree:ENSGT00650000092962 HOVERGEN:HBG031675
HOGENOM:HOG000231829 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B EMBL:AF110818 EMBL:AK132387 IPI:IPI00130319
PIR:JG0193 RefSeq:NP_034325.2 UniGene:Mm.42103
ProteinModelPortal:Q9Z1P4 SMR:Q9Z1P4 STRING:Q9Z1P4
PhosphoSite:Q9Z1P4 PRIDE:Q9Z1P4 DNASU:14160
Ensembl:ENSMUST00000020350 GeneID:14160 KEGG:mmu:14160
UCSC:uc007hbi.1 InParanoid:Q3V1L2 NextBio:285290 Bgee:Q9Z1P4
Genevestigator:Q9Z1P4 GermOnline:ENSMUSG00000020140 Uniprot:Q9Z1P4
Length = 907
Score = 177 (67.4 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 87/393 (22%), Positives = 146/393 (37%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMA-NPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQ 114
CP C C LD R + C D+ + +P + + T L + S N + L +
Sbjct: 34 CPSHCHCELDGRMLLRVDC--SDLGLSELP-SNLSVFTSYLDL--SMNNISQLPAS-LLH 87
Query: 115 QFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
+ LEEL + + + I F G+ SL+ L L +N + + + + + +LQ L LD
Sbjct: 88 RLCFLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDA 147
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
N I +P S F L LR L L N ++ + + N I I F
Sbjct: 148 NHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFG 207
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
++ L + + ++ + L L LDL YN
Sbjct: 208 NLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIKTLSNLKELGFHS- 266
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N+ I E++F L + N + V +AF +L L L ++ + F
Sbjct: 267 NNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLN----GASHITEFP 322
Query: 355 PIENS--LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT---DIPKGLFKMNPHL 409
+ + L L ++G I + D++Y D+P L
Sbjct: 323 HLTGTATLESLTLTGAKISSLPQAVCDQLPNLQ----VLDLSYNLLEDLPS--LSGCQKL 376
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
Q ++L N + +I +Q L L+L+ NK
Sbjct: 377 QKIDLRHNEIYEIKGSTFQQLFNLRSLNLAWNK 409
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 65/257 (25%), Positives = 99/257 (38%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F L LH+ N+ I ++G F G+ SL L+L +NN+ K + NL+EL
Sbjct: 206 FGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEF-PTAIKTLSNLKELGF 264
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXX-XXXXXXXXXYNDIVEINPE 231
N I SIP F+ L + N I + + I E P
Sbjct: 265 HSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITEF-PH 323
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+ L++ + ++ + L +L LDL YN
Sbjct: 324 L-TGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLLEDLPSLSGCQKLQKIDLR 382
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N I +F F L+ L L N++A + AF+ L +LI+LD+S N L V
Sbjct: 383 H--NEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVT 440
Query: 352 SFDPIENSLRDLKISGN 368
+ L LK++GN
Sbjct: 441 GL----HGLTHLKLTGN 453
>UNIPROTKB|C4PCK0 [details] [associations]
symbol:TLR5 "TLR5" species:9031 "Gallus gallus" [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0034146 "toll-like receptor 5 signaling
pathway" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005149
"interleukin-1 receptor binding" evidence=IEA] [GO:0032757
"positive regulation of interleukin-8 production" evidence=IEA]
[GO:0034123 "positive regulation of toll-like receptor signaling
pathway" evidence=IEA] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027176 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0032757 GO:GO:0071260 GO:GO:0004888
GeneTree:ENSGT00700000104185 SUPFAM:SSF52200 GO:GO:0034123
OMA:VSGNGWT PANTHER:PTHR24365:SF7 EMBL:AADN02012154 EMBL:FJ915535
EMBL:FJ915536 EMBL:FJ915537 EMBL:FJ915539 EMBL:FJ915543
EMBL:FJ915549 EMBL:FJ915551 EMBL:FJ915552 IPI:IPI00579878
STRING:C4PCK0 Ensembl:ENSGALT00000015302 Uniprot:C4PCK0
Length = 861
Score = 132 (51.5 bits), Expect = 5.6e-10, Sum P(3) = 5.6e-10
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
IF+ ++LE L++ + I I F+G+ +L LNL+ N + L DY F+G+ ++ +
Sbjct: 309 IFESLRNLEFLNLFRNKINQIQKQAFFGLENLEILNLSSNLLGELYDYTFEGLHSIMYID 368
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L N I I F +L +L+++ L N I KL
Sbjct: 369 LQQNHIGMIGEKSFSNLVNLKIIDLRDNAIKKL 401
Score = 107 (42.7 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 28/94 (29%), Positives = 56/94 (59%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F ++LE L+++++ + + + F G+ S+ Y++L N+I + + +F ++NL+ + L
Sbjct: 334 FFGLENLEILNLSSNLLGELYDYTFEGLHSIMYIDLQQNHIGMIGEKSFSNLVNLKIIDL 393
Query: 173 DFNKIESIPSSVFMHL-----SDLRVLSLAHNRI 201
N I+ +PS F HL SD +++S+AH I
Sbjct: 394 RDNAIKKLPS--FPHLTSAFLSDNKLMSVAHTAI 425
Score = 100 (40.3 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 44/121 (36%), Positives = 57/121 (47%)
Query: 98 VPSEENPNHLTIGPIFQ----QFQHLEELHI----TNSFIPA-IGFHPFWGVPSLRYLNL 148
VP + LT I Q F LE+L + T P IG F +P+LR L+L
Sbjct: 45 VPKDTAKLFLTYNYIRQVTATSFPLLEDLFLLEIGTQRVFPLYIGKEAFRNLPNLRVLDL 104
Query: 149 THNNITSLLDYN-FKGMMNLQELYLDFNKI-ESI-PSSVFMHLSDLRVLSLAHNRISKLA 205
NNI LLD + F G+ L L L N + +SI F L L L L+ N+I+KL
Sbjct: 105 GFNNIL-LLDLDSFAGLQRLTILRLFQNNLGDSILEERYFQDLRSLEELDLSGNQITKLH 163
Query: 206 P 206
P
Sbjct: 164 P 164
Score = 96 (38.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 107 LTIGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNI-TSLLDYN-FKG 163
L IG F+ +L L + + I + F G+ L L L NN+ S+L+ F+
Sbjct: 86 LYIGKEAFRNLPNLRVLDLGFNNILLLDLDSFAGLQRLTILRLFQNNLGDSILEERYFQD 145
Query: 164 MMNLQELYLDFNKIESI-PSSVFMHLSDLRVLSLAHNRISKL 204
+ +L+EL L N+I + P +F +L+ L+ ++L N+IS L
Sbjct: 146 LRSLEELDLSGNQITKLHPHPLFYNLTILKAVNLKFNKISNL 187
Score = 95 (38.5 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 102 ENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF 161
+NP+ T + + HL L I+N FI ++ F + +L +LNL N I + F
Sbjct: 277 KNPDTDTFTGLARSDLHL--LDISNGFIFSLNSLIFESLRNLEFLNLFRNKINQIQKQAF 334
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPR 207
G+ NL+ L L N + + F L + + L N I + +
Sbjct: 335 FGLENLEILNLSSNLLGELYDYTFEGLHSIMYIDLQQNHIGMIGEK 380
Score = 91 (37.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 28/110 (25%), Positives = 47/110 (42%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
L L++++ I SL F+ + NL+ L L NKI I F L +L +L+L+ N +
Sbjct: 292 LHLLDISNGFIFSLNSLIFESLRNLEFLNLFRNKINQIQKQAFFGLENLEILNLSSNLLG 351
Query: 203 KLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI 252
+L N I I + F ++ LK R ++ +
Sbjct: 352 ELYDYTFEGLHSIMYIDLQQNHIGMIGEKSFSNLVNLKIIDLRDNAIKKL 401
Score = 86 (35.3 bits), Expect = 5.6e-10, Sum P(3) = 5.6e-10
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 305 FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLK 364
F + KLQVL L N L+ + F LT+L L+++ N L L + F P SL +L
Sbjct: 500 FRTLSKLQVLHLNNNYLSALPQEIFNGLTSLKRLNLASNLLSHLSLRVF-P--QSLINLN 556
Query: 365 ISGNNI 370
+SGN +
Sbjct: 557 LSGNQL 562
Score = 79 (32.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 35/192 (18%), Positives = 78/192 (40%)
Query: 251 NINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFK 310
++N +++ L +L +L+L N+ N + + +F
Sbjct: 304 SLNSLIFESLRNLEFLNLFRNKINQIQKQAFFGLENLEILNLSSNLLGELYDYTFEGLHS 363
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
+ + L++N + + +F+NL NL +D+ N + +L SF + ++ +S N +
Sbjct: 364 IMYIDLQQNHIGMIGEKSFSNLVNLKIIDLRDNAIKKLP--SFPHLTSAF----LSDNKL 417
Query: 371 QXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQD-IHNLLYQS 429
+A++ + LF++ P +Q+L L N + ++
Sbjct: 418 MSVAHTAIVATHIELERNWLANLGDLYV---LFQV-PGVQYLLLKQNRFSYCVKHVDAIE 473
Query: 430 NIKLTHLDLSRN 441
N +L ++DL N
Sbjct: 474 NNQLIYMDLGEN 485
Score = 73 (30.8 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHP-FWGVPSLRYLNLTHNNITSLLDYN 160
FQ + LEEL ++ + I + HP F+ + L+ +NL N I++L + N
Sbjct: 143 FQDLRSLEELDLSGNQITKLHPHPLFYNLTILKAVNLKFNKISNLCESN 191
Score = 67 (28.6 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
I K F +L+ LNLS N L ++++ ++ + ++DL +N EKS+
Sbjct: 329 IQKQAFFGLENLEILNLSSNLLGELYDYTFEGLHSIMYIDLQQNHIGMIGEKSF 382
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 26/123 (21%), Positives = 49/123 (39%)
Query: 151 NNITSLLDYNFKGMMNLQELYLDFNK--IESIPSSVFMHLSDLRVLSLAHNRISKLAPRX 208
NN+ + F G+ LD + I S+ S +F L +L L+L N+I+++ +
Sbjct: 274 NNLKNPDTDTFTGLARSDLHLLDISNGFIFSLNSLIFESLRNLEFLNLFRNKINQIQKQA 333
Query: 209 XXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
N + E+ F+ + + + + I +S L +L +DL
Sbjct: 334 FFGLENLEILNLSSNLLGELYDYTFEGLHSIMYIDLQQNHIGMIGEKSFSNLVNLKIIDL 393
Query: 269 GYN 271
N
Sbjct: 394 RDN 396
Score = 49 (22.3 bits), Expect = 5.6e-10, Sum P(3) = 5.6e-10
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+ L+ LDL +N+I+ ++ + F +Q T+L
Sbjct: 96 LPNLRVLDLGFNNILLLDLDSFAGLQRLTIL 126
Score = 47 (21.6 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 33/138 (23%), Positives = 55/138 (39%)
Query: 311 LQVLCLKRNRLAKVT--TTAFTNLTNLIELDISYNKLDRL-EVASFDPIENSLRDLKIS- 366
+Q L LK+NR + A N LI +D+ N L + E + +L L++
Sbjct: 452 VQYLLLKQNRFSYCVKHVDAIEN-NQLIYMDLGENMLQLVWERGLCLDVFRTLSKLQVLH 510
Query: 367 -GNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNL 425
NN +A + + +F + L LNLSGN L
Sbjct: 511 LNNNYLSALPQEIFNGLTSLKRLNLASNLLSHLSLRVFPQS--LINLNLSGNQLFSPKPE 568
Query: 426 LYQSNIKLTHLDLSRNKF 443
++ + L+ LD++ NK+
Sbjct: 569 VFMT---LSILDITHNKY 583
Score = 45 (20.9 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 3 FTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
FT + S L LD+S I +N IF+ +++ L
Sbjct: 284 FTGLARSDLHLLDISNGFIFSLNSLIFESLRNLEFL 319
Score = 42 (19.8 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 8 MSKLKSLDLSYNDIVEINP 26
+ L+ LDLS N I +++P
Sbjct: 146 LRSLEELDLSGNQITKLHP 164
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 173 (66.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 54/225 (24%), Positives = 94/225 (41%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L HN+IT L F L L+LD N+I ++ F L L+ L L+ N+I L
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
+N + ++PE+F +++L+T RS L I ++ L +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LDL N+ N I F L L L+ N+++ +T
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
L +LD++ N++ +++ F+ + N L+ L + N +
Sbjct: 246 CGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPN-LKILLMDNNKL 289
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 47/182 (25%), Positives = 88/182 (48%)
Query: 92 TEVLKIVPSEENPNHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
T+++ + + + N L+ + P +F + L+ LH+ ++ + I FW SL +L+L+
Sbjct: 130 TQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLS 189
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
N + SL F G++ L+EL+L+ N++ I + F+ LS L L L N+IS L
Sbjct: 190 TNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGME 249
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLG 269
N+I I+ +F+ + LK + L +++ + + L L + L
Sbjct: 250 WTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTTVGLS 309
Query: 270 YN 271
N
Sbjct: 310 GN 311
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 56/241 (23%), Positives = 94/241 (39%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+T F F L LH+ ++ I + F G+ L+ L L+ N I L + F
Sbjct: 71 NHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFT 130
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
++NLQ L L FN++ S+ +F L L+ L L N + + R
Sbjct: 131 QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLST 190
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N + + F + +L+ L IN + L+ L L L +N+
Sbjct: 191 NRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEW 250
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
GN I F + L++L + N+L + + +L +L + +S
Sbjct: 251 TWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTTVGLSG 310
Query: 343 N 343
N
Sbjct: 311 N 311
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 61/271 (22%), Positives = 99/271 (36%)
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
Y D S+P++ L LSL HN I++L +N I +
Sbjct: 46 YCDSQGFHSVPNTT--DKGSLG-LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKE 102
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
+ F+ + +LK S + + ++ L +L LDL +NQ
Sbjct: 103 DAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTL 162
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
N I + F L+ L L NRL + F L L EL + +N+L ++
Sbjct: 163 HLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINF 222
Query: 351 ASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQ 410
A F + +SL L + N I + I +F+ P+L+
Sbjct: 223 AHFLRL-SSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGN-EIKAIDLTVFETMPNLK 280
Query: 411 FLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
L + N L + + + S LT + LS N
Sbjct: 281 ILLMDNNKLNSLDSKILNSLRSLTTVGLSGN 311
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 173 (66.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 54/225 (24%), Positives = 94/225 (41%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L HN+IT L F L L+LD N+I ++ F L L+ L L+ N+I L
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
+N + ++PE+F +++L+T RS L I ++ L +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
LDL N+ N I F L L L+ N+++ +T
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
L +LD++ N++ +++ F+ + N L+ L + N +
Sbjct: 246 CGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPN-LKILLMDNNKL 289
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 47/182 (25%), Positives = 88/182 (48%)
Query: 92 TEVLKIVPSEENPNHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
T+++ + + + N L+ + P +F + L+ LH+ ++ + I FW SL +L+L+
Sbjct: 130 TQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLS 189
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
N + SL F G++ L+EL+L+ N++ I + F+ LS L L L N+IS L
Sbjct: 190 TNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGME 249
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLG 269
N+I I+ +F+ + LK + L +++ + + L L + L
Sbjct: 250 WTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTTVGLS 309
Query: 270 YN 271
N
Sbjct: 310 GN 311
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 56/241 (23%), Positives = 94/241 (39%)
Query: 105 NHLTI--GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+T F F L LH+ ++ I + F G+ L+ L L+ N I L + F
Sbjct: 71 NHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFT 130
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY 222
++NLQ L L FN++ S+ +F L L+ L L N + + R
Sbjct: 131 QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLST 190
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXX 282
N + + F + +L+ L IN + L+ L L L +N+
Sbjct: 191 NRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEW 250
Query: 283 XXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
GN I F + L++L + N+L + + +L +L + +S
Sbjct: 251 TWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTTVGLSG 310
Query: 343 N 343
N
Sbjct: 311 N 311
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 61/271 (22%), Positives = 99/271 (36%)
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
Y D S+P++ L LSL HN I++L +N I +
Sbjct: 46 YCDSQGFHSVPNAT--DKGSLG-LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKE 102
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
+ F+ + +LK S + + ++ L +L LDL +NQ
Sbjct: 103 DAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTL 162
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
N I + F L+ L L NRL + F L L EL + +N+L ++
Sbjct: 163 HLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINF 222
Query: 351 ASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQ 410
A F + +SL L + N I + I +F+ P+L+
Sbjct: 223 AHFLRL-SSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGN-EIKAIDLTVFETMPNLK 280
Query: 411 FLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
L + N L + + + S LT + LS N
Sbjct: 281 ILLMDNNKLNSLDSKILNSLRSLTTVGLSGN 311
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 153 (58.9 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 49/186 (26%), Positives = 89/186 (47%)
Query: 22 VEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVM-CPYMCECALDDRGRYEIVCRRGDMA 80
+ I P + + D ++ + + L ++ CP +C C+ +++C R ++
Sbjct: 12 IMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFS---KVICVRKNLR 68
Query: 81 NPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGV 140
+ +P G + T +L + EN + F+ +HLE L ++ + I I F G+
Sbjct: 69 D-VPDG-ISTNTRLLNL---HENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH-N 199
+L L L N +T++ + F + L+EL+L N IESIPS F + LR L L
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 200 RISKLA 205
R+S ++
Sbjct: 184 RLSYIS 189
Score = 147 (56.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 55/217 (25%), Positives = 89/217 (41%)
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
R LNL N I + +FK + +L+ L L N I +I F L++L L L NR++
Sbjct: 79 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 138
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEI-FKDIQELKTFKCRSCG-LENINPMMYSILA 261
+ P N+ +E P F I L+ L I+ + L+
Sbjct: 139 I-PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L YL+L GNH I SF LQ L + ++++
Sbjct: 198 NLRYLNLA--MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 255
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
+ AF NL +L+E+++++N L L F P+ +
Sbjct: 256 QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I SF L++L L RN + + AF L NL L++ N+L + +F
Sbjct: 86 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXX--XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
+ + L++L + N I+ + ++Y I +G F+ +L++L
Sbjct: 146 YL-SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY--ISEGAFEGLSNLRYL 202
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
NL+ NL++I NL IKL LDLS N S+
Sbjct: 203 NLAMCNLREIPNLT--PLIKLDELDLSGNHLSAIRPGSF 239
Score = 67 (28.6 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 32/118 (27%), Positives = 48/118 (40%)
Query: 300 ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS 359
I E +F L+ L L L ++ T L L ELD+S N L + SF + +
Sbjct: 188 ISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMH- 244
Query: 360 LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
L+ L + + IQ +A N T +P LF HL+ ++L N
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEIN-LAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 44 (20.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 315 CLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
C+ N + T +A N+T SY + V + +P ++ R + NN+
Sbjct: 426 CMVSNSVGNTTASATLNVTAATTTPFSY--FSTVTVETMEPSQDEART---TDNNV 476
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 152 (58.6 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 49/186 (26%), Positives = 88/186 (47%)
Query: 22 VEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVM-CPYMCECALDDRGRYEIVCRRGDMA 80
+ I P + + D ++ + + L ++ CP +C C+ +++C R ++
Sbjct: 12 IMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFS---KVICVRKNLR 68
Query: 81 NPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGV 140
+P G + T +L + EN + F+ +HLE L ++ + I I F G+
Sbjct: 69 E-VPDG-ISTNTRLLNL---HENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH-N 199
+L L L N +T++ + F + L+EL+L N IESIPS F + LR L L
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 200 RISKLA 205
R+S ++
Sbjct: 184 RLSYIS 189
Score = 147 (56.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 55/217 (25%), Positives = 89/217 (41%)
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
R LNL N I + +FK + +L+ L L N I +I F L++L L L NR++
Sbjct: 79 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 138
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEI-FKDIQELKTFKCRSCG-LENINPMMYSILA 261
+ P N+ +E P F I L+ L I+ + L+
Sbjct: 139 I-PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L YL+L GNH I SF LQ L + ++++
Sbjct: 198 NLRYLNLA--MCNLREIPNLTPLVKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 255
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
+ AF NL +L+E+++++N L L F P+ +
Sbjct: 256 QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I SF L++L L RN + + AF L NL L++ N+L + +F
Sbjct: 86 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXX--XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
+ + L++L + N I+ + ++Y I +G F+ +L++L
Sbjct: 146 YL-SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY--ISEGAFEGLSNLRYL 202
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
NL+ NL++I NL +KL LDLS N S+
Sbjct: 203 NLAMCNLREIPNLT--PLVKLDELDLSGNHLSAIRPGSF 239
Score = 68 (29.0 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 32/118 (27%), Positives = 48/118 (40%)
Query: 300 ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS 359
I E +F L+ L L L ++ T L L ELD+S N L + SF + +
Sbjct: 188 ISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLVKLDELDLSGNHLSAIRPGSFQGLMH- 244
Query: 360 LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
L+ L + + IQ +A N T +P LF HL+ ++L N
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEIN-LAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 315 CLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
C+ N + T +A N+T SY + V + +P ++ R + NN+
Sbjct: 426 CMVSNSVGNTTASATLNVTAATTTPFSY--FSTVTVETMEPSQDEART---TDNNV 476
>ZFIN|ZDB-GENE-080723-57 [details] [associations]
symbol:lingo2 "leucine rich repeat and Ig domain
containing 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080723-57 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 HOVERGEN:HBG057546 CTD:158038
EMBL:CR788317 IPI:IPI00911397 RefSeq:NP_001139054.1
UniGene:Dr.111487 Ensembl:ENSDART00000102279 GeneID:564052
KEGG:dre:564052 OMA:STAMGCL NextBio:20885199 Uniprot:B8JIN1
Length = 607
Score = 140 (54.3 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 52/224 (23%), Positives = 91/224 (40%)
Query: 45 LYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENP 104
L+L A CP CEC++ R + C R +A +P G + + T L + +N
Sbjct: 17 LHLFQCPAHA-CPARCECSVPTRS---VSCHRRRLAQ-VPEG-IPIETRSLDL---SKNR 67
Query: 105 NHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGM 164
+ F LEEL ++N+ + ++ + F P LR L L N +T L G+
Sbjct: 68 LRIVTPQNFSSLLLLEELDLSNNLLSSVEPNSFRAQPRLRSLRLRSNQLTLLPRGALAGL 127
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND 224
L L + N++ + F LRVL L+ N + +APR +
Sbjct: 128 SELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRSLTLQRCN 187
Query: 225 IVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
+ + + L + + R G+ + + L L +L++
Sbjct: 188 LSTVPTHALAHLHGLTSLRLRDLGIAELQAHTFKGLPRLKHLEV 231
Score = 80 (33.2 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
+L+VL +++ L V AF ++L LD+ YN+L LE + F P+ +L+ L I N
Sbjct: 295 RLEVLRVRQANLLSVEPQAFQGASSLRILDLCYNRLATLERSVF-PVTEALQTLLIGQN 352
Score = 46 (21.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSE 455
+P G + L+ L + NL + +Q L LDL N+ + + ++E
Sbjct: 285 LPAGWLRGMDRLEVLRVRQANLLSVEPQAFQGASSLRILDLCYNRLATLERSVFPVTE 342
>UNIPROTKB|Q9HBX8 [details] [associations]
symbol:LGR6 "Leucine-rich repeat-containing G-protein
coupled receptor 6" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500 HOVERGEN:HBG031675
EMBL:AF190501 EMBL:AY358119 EMBL:AL356953 EMBL:BC047905
EMBL:AB049405 EMBL:AB083616 EMBL:AK027377 IPI:IPI00151908
IPI:IPI00479360 IPI:IPI00514691 RefSeq:NP_001017403.1
RefSeq:NP_001017404.1 RefSeq:NP_067649.2 UniGene:Hs.497402
ProteinModelPortal:Q9HBX8 SMR:Q9HBX8 STRING:Q9HBX8
PhosphoSite:Q9HBX8 DMDM:158519993 PaxDb:Q9HBX8 PRIDE:Q9HBX8
Ensembl:ENST00000255432 Ensembl:ENST00000367278
Ensembl:ENST00000439764 GeneID:59352 KEGG:hsa:59352 UCSC:uc001gxu.3
UCSC:uc001gxv.3 UCSC:uc001gxw.3 CTD:59352 GeneCards:GC01P202163
HGNC:HGNC:19719 MIM:606653 neXtProt:NX_Q9HBX8 PharmGKB:PA134927114
InParanoid:Q9HBX8 KO:K08399 OrthoDB:EOG4SQWW8 GenomeRNAi:59352
NextBio:65269 ArrayExpress:Q9HBX8 Bgee:Q9HBX8 CleanEx:HS_LGR6
Genevestigator:Q9HBX8 Uniprot:Q9HBX8
Length = 967
Score = 169 (64.5 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 71/286 (24%), Positives = 113/286 (39%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQ 115
CP C C +D C ++ +P G +D T L + S N L G +F
Sbjct: 35 CPAPCHCQ-EDGIMLSADCSELGLS-AVP-GDLDPLTAYLDL--SMNNLTELQPG-LFHH 88
Query: 116 FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN 175
+ LEEL ++ + + I F G+ SL+ L L +N + + + +LQ L LD N
Sbjct: 89 LRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDAN 148
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKD 235
I +P F LS LR L L N ++++ R N I I F++
Sbjct: 149 LISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQN 208
Query: 236 IQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGN 295
+ L + ++++ + L +L LDL YN+ N
Sbjct: 209 LTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPVAIRTLGRLQELGFH-NN 267
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
+ I EK+F LQ + N + V +AF L L L ++
Sbjct: 268 NIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLN 313
Score = 152 (58.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 66/257 (25%), Positives = 100/257 (38%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
FQ L LH+ N+ I +G H F G+ +L L+L +N + + + LQEL
Sbjct: 206 FQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEF-PVAIRTLGRLQELGF 264
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXX-XXXXXXXXXYNDIVEINPE 231
N I++IP FM L+ + N I + DI E P+
Sbjct: 265 HNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLNGAMDIQEF-PD 323
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+ K L+ G+ + M L L L+L +NQ
Sbjct: 324 L-KGTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEELPSLHRCQKLEEIGLQ 382
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N I +FS LQ L L N + + AF+ L +L++LD++ N+L L +A
Sbjct: 383 H--NRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQLTTLPLA 440
Query: 352 SFDPIENSLRDLKISGN 368
L LK+ GN
Sbjct: 441 GL----GGLMHLKLKGN 453
Score = 122 (48.0 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 60/273 (21%), Positives = 105/273 (38%)
Query: 171 YLDF--NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI 228
YLD N + + +F HL L L L+ N +S + + N + I
Sbjct: 70 YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGI 129
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXX 288
E ++ L++ + + + + + L+ L +L L N
Sbjct: 130 PAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQ 189
Query: 289 XXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
N I + +F + L VL L NR+ + T +F L NL LD++YNKL
Sbjct: 190 AMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEF 249
Query: 349 EVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPH 408
VA L++L NNI+ D + + F+ P
Sbjct: 250 PVAI--RTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFY-DNPIQFVGRSAFQYLPK 306
Query: 409 LQFLNLSGN-NLQDIHNLLYQSNIKLTHLDLSR 440
L L+L+G ++Q+ +L +++++ L L+R
Sbjct: 307 LHTLSLNGAMDIQEFPDLKGTTSLEI--LTLTR 337
Score = 121 (47.7 bits), Expect = 0.00075, P = 0.00075
Identities = 48/203 (23%), Positives = 78/203 (38%)
Query: 244 CRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEK 303
C GL + + + A YLDL N GNH I +
Sbjct: 52 CSELGLSAVPGDLDPLTA---YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQ 108
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
+FS + L++L L+ N+L + A L +L L + N + + SF+ + +SLR L
Sbjct: 109 AFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPERSFEGL-SSLRHL 167
Query: 364 KISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIH 423
+ N + +A + IP F+ L L+L N +Q +
Sbjct: 168 WLDDNAL-TEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLG 226
Query: 424 NLLYQSNIKLTHLDLSRNKFKGF 446
++ L LDL+ NK + F
Sbjct: 227 THSFEGLHNLETLDLNYNKLQEF 249
Score = 54 (24.1 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+I F LQ L+LS N ++ IH + + L LDL+ N+
Sbjct: 388 EIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQ 433
Score = 47 (21.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 14 LDLSYNDIVEINPEIFKDIQ 33
LDLS N++ E+ P +F ++
Sbjct: 71 LDLSMNNLTELQPGLFHHLR 90
>UNIPROTKB|F1NTY3 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:WITPNGS PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00573827 Ensembl:ENSGALT00000012910
ArrayExpress:F1NTY3 Uniprot:F1NTY3
Length = 545
Score = 156 (60.0 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 47/157 (29%), Positives = 79/157 (50%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
SS + CP +C C+ +++C R ++ + +P G + T +L + EN +
Sbjct: 9 SSGAQTCPSVCSCSNQFS---KVICVRKNLRD-VPDG-ISTNTRLLNL---HENQIQIIK 60
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F+ +HLE L ++ + I I F G+ +L L L N +T++ + F + L+E
Sbjct: 61 VNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKE 120
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAH-NRISKLA 205
L+L N IESIPS F + LR L L R+S ++
Sbjct: 121 LWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYIS 157
Score = 146 (56.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 55/215 (25%), Positives = 88/215 (40%)
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
R LNL N I + +FK + +L+ L L N I +I F L++L L L NR++
Sbjct: 47 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 106
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEI-FKDIQELKTFKCRSCG-LENINPMMYSILA 261
+ P N+ +E P F I L+ L I+ + L+
Sbjct: 107 I-PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 165
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L YL+L GNH I SF LQ L + ++++
Sbjct: 166 NLRYLNLA--MCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQGLMHLQKLWMIQSQI 223
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
+ AF NL +L+E+++++N L L F P+
Sbjct: 224 QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 258
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 42/149 (28%), Positives = 70/149 (46%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I SF L++L L RN + + AF L NL L++ N+L + +F
Sbjct: 54 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 113
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXX--XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
+ + L++L + N I+ + ++Y I +G F+ +L++L
Sbjct: 114 YL-SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY--ISEGAFEGLSNLRYL 170
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
NL+ NL++I NL +KL LDLS N
Sbjct: 171 NLAMCNLREIPNLT--PLVKLDELDLSGN 197
Score = 61 (26.5 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNN 369
KL L L N L + +F L +L +L + +++ +E +FD ++ SL ++ ++ NN
Sbjct: 188 KLDELDLSGNHLTAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ-SLVEINLAHNN 246
Query: 370 I 370
+
Sbjct: 247 L 247
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 152 (58.6 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 49/186 (26%), Positives = 88/186 (47%)
Query: 22 VEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVM-CPYMCECALDDRGRYEIVCRRGDMA 80
+ I P + + D ++ + + L ++ CP +C C+ +++C R ++
Sbjct: 12 IMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFS---KVICVRKNLR 68
Query: 81 NPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGV 140
+P G + T +L + EN + F+ +HLE L ++ + I I F G+
Sbjct: 69 E-VPDG-ISTNTRLLNL---HENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH-N 199
+L L L N +T++ + F + L+EL+L N IESIPS F + LR L L
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 200 RISKLA 205
R+S ++
Sbjct: 184 RLSYIS 189
Score = 147 (56.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 55/217 (25%), Positives = 89/217 (41%)
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
R LNL N I + +FK + +L+ L L N I +I F L++L L L NR++
Sbjct: 79 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 138
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEI-FKDIQELKTFKCRSCG-LENINPMMYSILA 261
+ P N+ +E P F I L+ L I+ + L+
Sbjct: 139 I-PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L YL+L GNH I SF LQ L + ++++
Sbjct: 198 NLRYLNLA--MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 255
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
+ AF NL +L+E+++++N L L F P+ +
Sbjct: 256 QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I SF L++L L RN + + AF L NL L++ N+L + +F
Sbjct: 86 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXX--XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
+ + L++L + N I+ + ++Y I +G F+ +L++L
Sbjct: 146 YL-SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY--ISEGAFEGLSNLRYL 202
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
NL+ NL++I NL IKL LDLS N S+
Sbjct: 203 NLAMCNLREIPNLT--PLIKLDELDLSGNHLSAIRPGSF 239
Score = 67 (28.6 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 32/118 (27%), Positives = 48/118 (40%)
Query: 300 ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS 359
I E +F L+ L L L ++ T L L ELD+S N L + SF + +
Sbjct: 188 ISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMH- 244
Query: 360 LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
L+ L + + IQ +A N T +P LF HL+ ++L N
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEIN-LAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 315 CLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
C+ N + T +A N+T SY + V + +P ++ R + NN+
Sbjct: 426 CMVSNSVGNTTASATLNVTAATTTPFSY--FSTVTVETMEPSQDEART---TDNNV 476
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 152 (58.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 49/186 (26%), Positives = 88/186 (47%)
Query: 22 VEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVM-CPYMCECALDDRGRYEIVCRRGDMA 80
+ I P + + D ++ + + L ++ CP +C C+ +++C R ++
Sbjct: 12 IMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFS---KVICVRKNLR 68
Query: 81 NPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGV 140
+P G + T +L + EN + F+ +HLE L ++ + I I F G+
Sbjct: 69 E-VPDG-ISTNTRLLNL---HENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH-N 199
+L L L N +T++ + F + L+EL+L N IESIPS F + LR L L
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 200 RISKLA 205
R+S ++
Sbjct: 184 RLSYIS 189
Score = 147 (56.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 55/217 (25%), Positives = 89/217 (41%)
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
R LNL N I + +FK + +L+ L L N I +I F L++L L L NR++
Sbjct: 79 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 138
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEI-FKDIQELKTFKCRSCG-LENINPMMYSILA 261
+ P N+ +E P F I L+ L I+ + L+
Sbjct: 139 I-PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L YL+L GNH I SF LQ L + ++++
Sbjct: 198 NLRYLNLA--MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 255
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
+ AF NL +L+E+++++N L L F P+ +
Sbjct: 256 QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I SF L++L L RN + + AF L NL L++ N+L + +F
Sbjct: 86 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXX--XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
+ + L++L + N I+ + ++Y I +G F+ +L++L
Sbjct: 146 YL-SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY--ISEGAFEGLSNLRYL 202
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
NL+ NL++I NL IKL LDLS N S+
Sbjct: 203 NLAMCNLREIPNLT--PLIKLDELDLSGNHLSAIRPGSF 239
Score = 67 (28.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 32/118 (27%), Positives = 48/118 (40%)
Query: 300 ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS 359
I E +F L+ L L L ++ T L L ELD+S N L + SF + +
Sbjct: 188 ISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMH- 244
Query: 360 LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
L+ L + + IQ +A N T +P LF HL+ ++L N
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEIN-LAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 315 CLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
C+ N + T +A N+T SY + V + +P ++ R + NN+
Sbjct: 426 CMVSNSVGNTTASATLNVTAATTTPFSY--FSTVTVETMEPSQDEART---TDNNV 476
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 152 (58.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 49/186 (26%), Positives = 88/186 (47%)
Query: 22 VEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVM-CPYMCECALDDRGRYEIVCRRGDMA 80
+ I P + + D ++ + + L ++ CP +C C+ +++C R ++
Sbjct: 12 IMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFS---KVICVRKNLR 68
Query: 81 NPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGV 140
+P G + T +L + EN + F+ +HLE L ++ + I I F G+
Sbjct: 69 E-VPDG-ISTNTRLLNL---HENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH-N 199
+L L L N +T++ + F + L+EL+L N IESIPS F + LR L L
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 200 RISKLA 205
R+S ++
Sbjct: 184 RLSYIS 189
Score = 147 (56.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 55/217 (25%), Positives = 89/217 (41%)
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
R LNL N I + +FK + +L+ L L N I +I F L++L L L NR++
Sbjct: 79 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 138
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEI-FKDIQELKTFKCRSCG-LENINPMMYSILA 261
+ P N+ +E P F I L+ L I+ + L+
Sbjct: 139 I-PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L YL+L GNH I SF LQ L + ++++
Sbjct: 198 NLRYLNLA--MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 255
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
+ AF NL +L+E+++++N L L F P+ +
Sbjct: 256 QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I SF L++L L RN + + AF L NL L++ N+L + +F
Sbjct: 86 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXX--XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
+ + L++L + N I+ + ++Y I +G F+ +L++L
Sbjct: 146 YL-SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY--ISEGAFEGLSNLRYL 202
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
NL+ NL++I NL IKL LDLS N S+
Sbjct: 203 NLAMCNLREIPNLT--PLIKLDELDLSGNHLSAIRPGSF 239
Score = 67 (28.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 32/118 (27%), Positives = 48/118 (40%)
Query: 300 ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS 359
I E +F L+ L L L ++ T L L ELD+S N L + SF + +
Sbjct: 188 ISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMH- 244
Query: 360 LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
L+ L + + IQ +A N T +P LF HL+ ++L N
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEIN-LAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 315 CLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
C+ N + T +A N+T SY + V + +P ++ R + NN+
Sbjct: 426 CMVSNSVGNTTASATLNVTAATTTPFSY--FSTVTVETMEPSQDEART---TDNNV 476
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 152 (58.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 49/186 (26%), Positives = 88/186 (47%)
Query: 22 VEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVM-CPYMCECALDDRGRYEIVCRRGDMA 80
+ I P + + D ++ + + L ++ CP +C C+ +++C R ++
Sbjct: 12 IMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFS---KVICVRKNLR 68
Query: 81 NPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGV 140
+P G + T +L + EN + F+ +HLE L ++ + I I F G+
Sbjct: 69 E-VPDG-ISTNTRLLNL---HENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH-N 199
+L L L N +T++ + F + L+EL+L N IESIPS F + LR L L
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 200 RISKLA 205
R+S ++
Sbjct: 184 RLSYIS 189
Score = 147 (56.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 55/217 (25%), Positives = 89/217 (41%)
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
R LNL N I + +FK + +L+ L L N I +I F L++L L L NR++
Sbjct: 79 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 138
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEI-FKDIQELKTFKCRSCG-LENINPMMYSILA 261
+ P N+ +E P F I L+ L I+ + L+
Sbjct: 139 I-PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L YL+L GNH I SF LQ L + ++++
Sbjct: 198 NLRYLNLA--MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 255
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
+ AF NL +L+E+++++N L L F P+ +
Sbjct: 256 QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I SF L++L L RN + + AF L NL L++ N+L + +F
Sbjct: 86 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXX--XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
+ + L++L + N I+ + ++Y I +G F+ +L++L
Sbjct: 146 YL-SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY--ISEGAFEGLSNLRYL 202
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
NL+ NL++I NL IKL LDLS N S+
Sbjct: 203 NLAMCNLREIPNLT--PLIKLDELDLSGNHLSAIRPGSF 239
Score = 67 (28.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 32/118 (27%), Positives = 48/118 (40%)
Query: 300 ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS 359
I E +F L+ L L L ++ T L L ELD+S N L + SF + +
Sbjct: 188 ISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMH- 244
Query: 360 LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
L+ L + + IQ +A N T +P LF HL+ ++L N
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEIN-LAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 315 CLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
C+ N + T +A N+T SY + V + +P ++ R + NN+
Sbjct: 426 CMVSNSVGNTTASATLNVTAATTTPFSY--FSTVTVETMEPSQDEART---TDNNV 476
>ZFIN|ZDB-GENE-060531-8 [details] [associations]
symbol:rxfp2l "relaxin/insulin-like family peptide
receptor 2, like" species:7955 "Danio rerio" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50262 PROSITE:PS51450 ZFIN:ZDB-GENE-060531-8
GO:GO:0016021 GO:GO:0004930 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 HOVERGEN:HBG026354 GeneTree:ENSGT00650000093266
OrthoDB:EOG4NGGM1 EMBL:BX005476 EMBL:CU915756 IPI:IPI00897044
UniGene:Dr.141917 Ensembl:ENSDART00000143448 Uniprot:B0S5B5
Length = 622
Score = 173 (66.0 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 62/245 (25%), Positives = 97/245 (39%)
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F +++HLE LH+ ++ I I F G+ +LR L L+ N I+SL F + +L+ L
Sbjct: 65 LFIRYRHLERLHLESNSIETISKRAFSGLVALRKLFLSQNKISSLKAGIFSDLSSLEWLI 124
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE-INP 230
LD N+I S+ F L L LSL +N + + +I+ +
Sbjct: 125 LDENRISSLRQKSFEGLKSLFFLSLLNNSVEQFPKTSICHEMPRLNWLEMEGNIISSLWA 184
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
FK+ L R + I ++ + LI LD+ NQ
Sbjct: 185 SSFKNCSSLTVLALRRNRISTIEEGTFADMQRLIDLDVSVNQIKDLPPSLFQNLQNLKQL 244
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
N I F S LQ L ++ + ++ F LTNL + Y K R E
Sbjct: 245 NISNNPLVNIYSNQFDSLVNLQSLSMEEVEIPNISIRMFRPLTNLTHI---YFK--RFEF 299
Query: 351 ASFDP 355
+ P
Sbjct: 300 CGYSP 304
Score = 164 (62.8 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 51/204 (25%), Positives = 83/204 (40%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ L L+ N+IES+ +F+ L L L N I ++ R N I
Sbjct: 47 NVTALELNSNRIESLSRDLFIRYRHLERLHLESNSIETISKRAFSGLVALRKLFLSQNKI 106
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ IF D+ L+ + ++ + L L +L L N
Sbjct: 107 SSLKAGIFSDLSSLEWLILDENRISSLRQKSFEGLKSLFFLSLLNNSVEQFPKTSICHEM 166
Query: 286 XXXX-XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
GN + SF + L VL L+RNR++ + F ++ LI+LD+S N+
Sbjct: 167 PRLNWLEMEGNIISSLWASSFKNCSSLTVLALRRNRISTIEEGTFADMQRLIDLDVSVNQ 226
Query: 345 LDRLEVASFDPIENSLRDLKISGN 368
+ L + F ++N L+ L IS N
Sbjct: 227 IKDLPPSLFQNLQN-LKQLNISNN 249
Score = 136 (52.9 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 49/238 (20%), Positives = 91/238 (38%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L + ++ I ++ F L L+L N+I ++ F G++ L++L+L NKI S+
Sbjct: 51 LELNSNRIESLSRDLFIRYRHLERLHLESNSIETISKRAFSGLVALRKLFLSQNKISSLK 110
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI-NPEIFKDIQELK 240
+ +F LS L L L NRIS L + N + + I ++ L
Sbjct: 111 AGIFSDLSSLEWLILDENRISSLRQKSFEGLKSLFFLSLLNNSVEQFPKTSICHEMPRLN 170
Query: 241 TFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVI 300
+ + ++ + + L L L N+ N +
Sbjct: 171 WLEMEGNIISSLWASSFKNCSSLTVLALRRNRISTIEEGTFADMQRLIDLDVSVNQIKDL 230
Query: 301 LEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
F + L+ L + N L + + F +L NL L + ++ + + F P+ N
Sbjct: 231 PPSLFQNLQNLKQLNISNNPLVNIYSNQFDSLVNLQSLSMEEVEIPNISIRMFRPLTN 288
>UNIPROTKB|E1BT96 [details] [associations]
symbol:E1BT96 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0030282 "bone mineralization" evidence=IEA] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=IEA] [GO:0070171 "negative regulation
of tooth mineralization" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005578 InterPro:IPR003591 SMART:SM00369
GO:GO:0005509 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104006 GO:GO:0070171 GO:GO:0030512
EMBL:AADN02013901 IPI:IPI00602330 Ensembl:ENSGALT00000007519
OMA:NRNIREV Uniprot:E1BT96
Length = 571
Score = 130 (50.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 52/197 (26%), Positives = 95/197 (48%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGR- 69
++ + L N + ++ P + D++ QV +FL+ H + + + C R +
Sbjct: 249 IREIHLEKNKLKKVPPGL-PDLR----YLQV-VFLHSNHIAKLGVNDF---CPTGRRKKE 299
Query: 70 YEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFI 129
Y ++ A+ P+G +L ++ P +H + I H+++L++ N+ I
Sbjct: 300 YVLLHSNSPRAHSYPLGYNNL----IREFPLSMYCDHRKLKTIPNIPAHVQQLYLQNNDI 355
Query: 130 PAIGFHPFWGVPSLRYLNLTHNNIT-SLLDYN-FKGMMNLQELYLDFNKIESIPSSVFMH 187
A+ PF V LR +NL++N I +LD+ F + NL +L+L N+++ P F
Sbjct: 356 EAVPAGPFTNVTILREINLSYNKIKFHMLDHGVFAKLSNLVQLHLHHNELDEFP---FPL 412
Query: 188 LSDLRVLSLAHNRISKL 204
S L L L N+ISKL
Sbjct: 413 PSSLERLLLGFNKISKL 429
Score = 100 (40.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 26/86 (30%), Positives = 49/86 (56%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L ELH+ ++ I A+ F L+ L L +N I + + +F + +++E++L+ NK++
Sbjct: 201 LLELHLDDNKITAVELEDFNRYKDLQRLGLGNNKIKDVENGSFANIPSIREIHLEKNKLK 260
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKL 204
+P + L L+V+ L N I+KL
Sbjct: 261 KVPPGL-PDLRYLQVVFLHSNHIAKL 285
Score = 98 (39.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 27/111 (24%), Positives = 51/111 (45%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNR 200
P R ++L +N I + + + +G+ +L L L+ NKI I F +LR L L+HN+
Sbjct: 60 PDTRMIDLQNNKIREVKENDLQGLASLYALALNNNKITKIHPKAFQPTKNLRRLYLSHNQ 119
Query: 201 ISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLEN 251
++++ N + +I + FK ++ L + + L N
Sbjct: 120 LTEIPTNLPKTLAELRIHA---NKVKKIPKDAFKGMKSLHVLEMSANPLNN 167
Score = 94 (38.1 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 45/177 (25%), Positives = 72/177 (40%)
Query: 30 KDIQDTTMLFQVTI-FLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMA-NPIPIGQ 87
+D D LF T + L+ CP+ C+C Y V D+ IP
Sbjct: 6 EDDDDDNSLFPTTEPIISLIPFDLFPTCPFGCQC-------YVRVVHCSDLGLTSIP--- 55
Query: 88 MDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHP--FWGVPSLRY 145
++ + +++ + N Q L L + N+ I I HP F +LR
Sbjct: 56 RNIPPDT-RMIDLQNNKIREVKENDLQGLASLYALALNNNKITKI--HPKAFQPTKNLRR 112
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
L L+HN +T + N L EL + NK++ IP F + L VL ++ N ++
Sbjct: 113 LYLSHNQLTEI-PTNLP--KTLAELRIHANKVKKIPKDAFKGMKSLHVLEMSANPLN 166
Score = 92 (37.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 43/164 (26%), Positives = 65/164 (39%)
Query: 329 FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
F L+NL++L + +N+LD P+ +SL L + N I
Sbjct: 389 FAKLSNLVQLHLHHNELDEFPF----PLPSSLERLLLGFNKISKLPGIALDGLANITMLD 444
Query: 389 XIADMNYTDIPKGL-FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFD 447
++ + KG F +L LNL N LQ + L S L +L L N
Sbjct: 445 LCSNFLDDSVLKGNPFSAMNNLMQLNLCNNKLQTMPPNLPSS---LMYLSLENNSI---- 497
Query: 448 EKSYIMSEPKNIHKAAKNSFALQSSMGKNAEYAVFIASSSISYL 491
SYI + P+N + N L ++G N VF S+ +L
Sbjct: 498 --SYIPNIPRNTFISLPNLIEL--NLGHNKLKQVFYIPRSLQHL 537
Score = 89 (36.4 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 42/157 (26%), Positives = 63/157 (40%)
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDP 355
H + E F L+ L L N+++K+ A L N+ LD+ N LD V +P
Sbjct: 401 HHNELDEFPFPLPSSLERLLLGFNKISKLPGIALDGLANITMLDLCSNFLDD-SVLKGNP 459
Query: 356 IE--NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT-DIPKGLFKMNPHLQFL 412
N+L L + N +Q ++Y +IP+ F P+L L
Sbjct: 460 FSAMNNLMQLNLCNNKLQTMPPNLPSSLMYLSLENN--SISYIPNIPRNTFISLPNLIEL 517
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF-KGFDE 448
NL N L+ + Y L HL + N K +DE
Sbjct: 518 NLGHNKLKQV---FYIPR-SLQHLYIEDNDIEKEYDE 550
>UNIPROTKB|B3XXC2 [details] [associations]
symbol:TLR8 "Toll-like receptor 8" species:9823 "Sus
scrofa" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045416 "positive regulation of interleukin-8 biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045356
"positive regulation of interferon-alpha biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0050707 "regulation of cytokine secretion"
evidence=IEA] [GO:0034158 "toll-like receptor 8 signaling pathway"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027175 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
GO:GO:0016021 GO:GO:0003677 GO:GO:0003727 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0051607
GO:GO:0005622 GO:GO:0003725 GO:GO:0071260 GO:GO:0045089
GO:GO:0045416 GO:GO:0007249 GO:GO:0045078 SUPFAM:SSF52200
GO:GO:0045359 GeneTree:ENSGT00680000099674 GO:GO:0045356
HOVERGEN:HBG018601 PANTHER:PTHR24365:SF2 OMA:ELHGNPF EMBL:FP102063
EMBL:FP085461 EMBL:AB291813 STRING:B3XXC2
Ensembl:ENSSSCT00000013255 Ensembl:ENSSSCT00000033339
Ensembl:ENSSSCT00000033711 Uniprot:B3XXC2
Length = 1028
Score = 127 (49.8 bits), Expect = 9.1e-10, Sum P(3) = 9.1e-10
Identities = 48/152 (31%), Positives = 72/152 (47%)
Query: 96 KIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVP-SLRYLNLTHNNIT 154
K+ P EN +T G F HL EL + ++ + I P G+P SLR L+L N I
Sbjct: 96 KLWPQSENGMTITDGA-FLNLHHLRELLLEDNQLREI---PT-GLPESLRELSLIQNKII 150
Query: 155 SLLDYNFKGMMNLQELYLDFNKI----ES--IPSSVFMHLSDLRVLSLAHNRISKLAPRX 208
L N G+ L+ LYL +N E+ I F +L++L+VLSL+ N + ++ P+
Sbjct: 151 LLNTKNMFGLRKLESLYLGWNCYFTCNETFIIDEGAFENLTNLKVLSLSFNTLYRVPPKL 210
Query: 209 XXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
I IN E FK ++ L+
Sbjct: 211 PSSLTKLYLSNTK---IRNINQEDFKGLENLR 239
Score = 98 (39.6 bits), Expect = 9.1e-10, Sum P(3) = 9.1e-10
Identities = 32/116 (27%), Positives = 48/116 (41%)
Query: 329 FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
F NL+ L LD+S N L + +F + +L +L IS N +
Sbjct: 624 FKNLSTLTHLDLSSNNLQHIPSEAFLNLPQTLTELYISDNRLNFFNWSLLQQFPNLTLLD 683
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
++ + + L K LQ L L N + + + L LTHLDLS N+ K
Sbjct: 684 -LSGNELSFLTDSLSKFTTSLQTLILRQNRISYLPSGLLSEASSLTHLDLSSNQLK 738
Score = 97 (39.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 42/163 (25%), Positives = 71/163 (43%)
Query: 118 HLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN--------NITSLLDYNFKGMMNLQE 169
++ EL ++++FI I F G+ +L +NL HN N ++ D F + +L+E
Sbjct: 61 YVTELDLSDNFIRRITNESFQGLQNLTKINLNHNAKLWPQSENGMTITDGAFLNLHHLRE 120
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN------ 223
L L+ N++ IP+ + LR LSL N+I L + +N
Sbjct: 121 LLLEDNQLREIPTGL---PESLRELSLIQNKIILLNTKNMFGLRKLESLYLGWNCYFTCN 177
Query: 224 DIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
+ I+ F+++ LK L + P + S L L YL
Sbjct: 178 ETFIIDEGAFENLTNLKVLSLSFNTLYRVPPKLPSSLTKL-YL 219
Score = 95 (38.5 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 40/142 (28%), Positives = 56/142 (39%)
Query: 305 FSSQFKLQVLCLKRNRLAKVTTTAFTNLTN-LIELDISYNKLDRLEVASFDPIENSLRDL 363
F + L L L N L + + AF NL L EL IS N+L+ + N L L
Sbjct: 624 FKNLSTLTHLDLSSNNLQHIPSEAFLNLPQTLTELYISDNRLNFFNWSLLQQFPN-LTLL 682
Query: 364 KISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQ--D 421
+SGN + + + +P GL L L+LS N L+ +
Sbjct: 683 DLSGNELSFLTDSLSKFTTSLQTLI-LRQNRISYLPSGLLSEASSLTHLDLSSNQLKMVN 741
Query: 422 IHNLLYQSNIKLTHLDLSRNKF 443
I L ++ L L L RN F
Sbjct: 742 ISKLHAKTTTNLAILKLDRNPF 763
Score = 78 (32.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 24/73 (32%), Positives = 37/73 (50%)
Query: 135 HPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY---LDFNKIESIPSSVFMHLSDL 191
H F + SL+ L+L L +F+ + NL L L N I+ I ++F S+L
Sbjct: 351 HYFANLTSLQILHLRAYVFQELRKEDFQPLRNLLHLKFINLGINFIKQIDFTIFSEFSNL 410
Query: 192 RVLSLAHNRISKL 204
++ L+ NRIS L
Sbjct: 411 SIIYLSENRISPL 423
Score = 43 (20.2 bits), Expect = 9.1e-10, Sum P(3) = 9.1e-10
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 14 LDLSYNDIVEINPEIFKDIQDTTML 38
LDLS N I I E F+ +Q+ T +
Sbjct: 65 LDLSDNFIRRITNESFQGLQNLTKI 89
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 8 MSKLKSLDLSYNDIVEINPEI 28
++ LK L LS+N + + P++
Sbjct: 190 LTNLKVLSLSFNTLYRVPPKL 210
Score = 39 (18.8 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 7 FMSKLKSL---DLSYN 19
F++KL SL DLSYN
Sbjct: 322 FLAKLPSLEILDLSYN 337
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 175 (66.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 93/420 (22%), Positives = 167/420 (39%)
Query: 45 LYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENP 104
L LL ++ + +CP C C L + C R + P P + G I + +
Sbjct: 31 LRLLPAARAGLCPAPCACRLP-----LLDCSRRKL--PAPSWRALSGPLPSDISSLDLSH 83
Query: 105 NHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWG--VPSLRYLNLTHNNITSLLDYNFK 162
N L+ + Q L+E+ + + + I P++G P++ L+L HN I + F+
Sbjct: 84 NRLSNWNNTLESQTLQEVKMNYNELTEI---PYFGEPTPNITLLSLVHNLIPEINAEAFE 140
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL-APRXXXXXXXXXXXXXX 221
L+ L L N I I +S F +S L+ L+L++NRIS L A
Sbjct: 141 LYSALESLDLSSNIISEIKTSSFPRMS-LKYLNLSNNRISTLEAGCFDNLSDSLLVVKLN 199
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
N I I P++FK + L+ + + ++ + + + L L L + N
Sbjct: 200 RNRISMIPPKVFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAF 258
Query: 282 XXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
N+ + + LQ L + +N + K++ A+ L ELD+S
Sbjct: 259 FGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLS 318
Query: 342 YNKLDRLEVASFDPIENSLRDLKISGNNI-QXXXXXXXXXXXXXXXXXXIADMNYT-DIP 399
YN+L RL+ ++F + + L L + N + D+++ +
Sbjct: 319 YNQLTRLDESAFVGL-SLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDA 377
Query: 400 KGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNI 459
F L L L GN ++ + + L +LDL+ N E ++ + K +
Sbjct: 378 SEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFSQTHLKGL 437
Score = 166 (63.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 56/241 (23%), Positives = 98/241 (40%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N +++ P +F+ HL+ L + + I + F G+ SLR L + N I+ L D
Sbjct: 199 NRNRISMIPPKVFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGA 257
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
F G+ N++EL L+ N + + L L+ L ++ N I K++P
Sbjct: 258 FFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDL 317
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXX 280
YN + ++ F + L+ + +I ++ L++L LDL N
Sbjct: 318 SYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDA 377
Query: 281 XXXXXXXXXXXXX---GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAF--TNLTNL 335
GN + +K+F L+ L L N + + AF T+L L
Sbjct: 378 SEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFSQTHLKGL 437
Query: 336 I 336
+
Sbjct: 438 V 438
Score = 146 (56.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 52/234 (22%), Positives = 98/234 (41%)
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
+P L++L L N I + F+G+ +L+ L + N I + F L+++ L L HN
Sbjct: 213 LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHN 272
Query: 200 RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSI 259
++ + N I +I+P+ ++ Q L L ++ +
Sbjct: 273 NLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVG 332
Query: 260 LADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILE---KSFSSQFKLQVLCL 316
L+ L L+LG N+ N +E ++FS L L L
Sbjct: 333 LSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLIL 392
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
+ NR+ VT AF L +L LD++ N + ++ +F + L+ L ++ +++
Sbjct: 393 QGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFS--QTHLKGLVLNTSSL 444
Score = 128 (50.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 54/231 (23%), Positives = 90/231 (38%)
Query: 95 LKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNIT 154
L+ + + N + G FQ L L + + I + F+G+ ++ L L HNN+T
Sbjct: 216 LQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLT 275
Query: 155 SLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXX 214
+ G+ LQ+LY+ N IE I + L L L++N++++L
Sbjct: 276 GVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSL 335
Query: 215 XXXXXXXYNDIVEINPEIFKDIQELKTFKCR----SCGLENINPMMYSILADLIYLDLGY 270
N + I +F+ + L+T R S +E+ + +S L L L L
Sbjct: 336 LERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEA-FSGLKSLTKLILQG 394
Query: 271 NQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
N+ N I E +FS Q L+ L L + L
Sbjct: 395 NRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFS-QTHLKGLVLNTSSL 444
Score = 45 (20.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 9 SKLKSLDLSYNDIVEINPEIF 29
S L+SLDLS N I EI F
Sbjct: 143 SALESLDLSSNIISEIKTSSF 163
Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 14 LDLSYNDIVEINPEIFK 30
L L +N I EIN E F+
Sbjct: 124 LSLVHNLIPEINAEAFE 140
>UNIPROTKB|Q5TJ59 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0010008 "endosome membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0007165
GO:GO:0005789 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0003723 GO:GO:0010008 InterPro:IPR000372 SMART:SM00013
SUPFAM:SSF52200 EMBL:AJ812026 IPI:IPI00713414 RefSeq:NP_001008664.1
UniGene:Bt.12298 HSSP:O15455 ProteinModelPortal:Q5TJ59
STRING:Q5TJ59 PRIDE:Q5TJ59 GeneID:281535 KEGG:bta:281535 CTD:7098
HOVERGEN:HBG023181 InParanoid:Q5TJ59 KO:K05401 OrthoDB:EOG4N30N8
NextBio:20805490 PANTHER:PTHR24365:SF5 Uniprot:Q5TJ59
Length = 904
Score = 174 (66.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 77/308 (25%), Positives = 115/308 (37%)
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
+P L LNL HN I+ L D F MNL EL+L N I+ I + F +L +L L L+HN
Sbjct: 99 LPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHN 158
Query: 200 RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI--QELKTFKCRSCGLENINPMMY 257
+S N I + P F + LK + S ++ +P +
Sbjct: 159 GLSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIKEFSPGCF 218
Query: 258 SILADLIYLDLG---YNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS--QFKLQ 312
L +L L L + N I +F Q L
Sbjct: 219 HTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLT 278
Query: 313 VLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR-DLKIS--GNN 369
L L RN L + +F L +L L + YN ++ L SF + N R DL+ S +
Sbjct: 279 TLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQS 338
Query: 370 IQXXXXXXXXXXXXX----XXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNL 425
I + D N+ I + F L+FL+LS N+ + L
Sbjct: 339 ISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLS-NSFSSLRTL 397
Query: 426 LYQSNIKL 433
++ + L
Sbjct: 398 TNETFLSL 405
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 91/404 (22%), Positives = 151/404 (37%)
Query: 105 NHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGM 164
+H T + Q +L L ++ + + +G F +P L YL+L +NNI L +F G+
Sbjct: 265 SHTTFDGLKQT--NLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGL 322
Query: 165 MNLQELYL--DFNK----IESIPSS---VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXX 215
NL+ L L F + + S+P F L L L++ N +
Sbjct: 323 SNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRL 382
Query: 216 X--XXXXXYNDIVEINPEIFKDIQ--ELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
++ + + E F + L + I +S L L LDLG N
Sbjct: 383 KFLSLSNSFSSLRTLTNETFLSLAGCPLLLLDLTKNKISKIQSGAFSWLGHLEVLDLGLN 442
Query: 272 QXXXXXXXXXXXXXXXXXXXXXG-NHFPVILEKSFSSQFKLQVLCLKRNRLAKV--TTTA 328
+ N + + SF+S LQ L L+R L V + +
Sbjct: 443 EIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSP 502
Query: 329 FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
F L NL+ LD+S N + + +E L L + NN+
Sbjct: 503 FRPLPNLVILDLSNNNIANINDELLKGLEK-LEILDLQHNNLARLWKHANPG-------- 553
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
+ + KGLF HL LNL N +I ++ +L +DL N
Sbjct: 554 --GPVQFL---KGLF----HLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLN---- 600
Query: 449 KSYIMSEPKNIHKAAKNSFALQSSMGKNAEYAVF-IASSSISYL 491
I+ + ++ + S +LQ ++ + + VF A ++SYL
Sbjct: 601 ---ILPQSVFDNQVSLKSLSLQKNLITSVQKTVFGPAFRNLSYL 641
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 58/236 (24%), Positives = 93/236 (39%)
Query: 142 SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
++ LNLTHN + L NF L L FN I + + L L +L+L HN I
Sbjct: 53 NITVLNLTHNQLRRLPPANFTRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNEI 112
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
S+L+ + N I +I + FK+++ L GL + L
Sbjct: 113 SQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQLQLE 172
Query: 262 DLIYLDLGYNQXXXXX--XXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRN 319
+L L L N+ N F + +L L L
Sbjct: 173 NLQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSGLSLNNA 232
Query: 320 RLA-KVTTTAFTNLTNL-IE-LDISYNKLDRLEVASFDPI-ENSLRDLKISGNNIQ 371
+L+ +T L+N IE L +S N+LD + +FD + + +L L +S N+++
Sbjct: 233 KLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLR 288
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 152 (58.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 83/347 (23%), Positives = 130/347 (37%)
Query: 113 FQQFQHLEELHIT-NSF--IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
+ Q+L L ++ N F P F P + L +L+L+ N IT L + F G+ L+E
Sbjct: 416 WSSLQNLTSLDLSHNKFKSFPDFAFSP---LKHLEFLSLSRNPITELNNLAFSGLFALKE 472
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN 229
L L I +I F +L VL L N I L +N + +
Sbjct: 473 LNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKILE 532
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXX-----X 284
P F + L++ L + ++S L L+ L LG+N+
Sbjct: 533 PNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKLGFNKITYETTRTLQYPPFIKL 592
Query: 285 XXXXXXXXXGN-H-FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISY 342
G H V+ F LQ L L +N + F L NL +LDIS
Sbjct: 593 KSLKQLNLEGQRHGIQVVPSNFFQGLGSLQELLLGKNPSVFLDHHQFDPLINLTKLDISG 652
Query: 343 NKL-DR---LEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDI 398
K DR L + F ++ L+ L++ NN++ + N I
Sbjct: 653 TKDGDRSLYLNASLFQNLKR-LKILRLENNNLESLVPDMFSSLQSLQVFS-LRFNNLKVI 710
Query: 399 PKGLFKMNPHLQFLNLSGNNLQ-DIHNLLYQS---NIKLTHLDLSRN 441
+ K L F ++ GN LQ NL +++ N + H+ R+
Sbjct: 711 NQSHLKNLKSLMFFDVYGNKLQCTCDNLWFKNWSMNTEEVHIPFLRS 757
Score = 147 (56.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 60/265 (22%), Positives = 100/265 (37%)
Query: 108 TIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN-ITSLLDYNFKGMMN 166
T+ + LE L + A G L +L+L N+ + L D F + +
Sbjct: 338 TVCHLLGNLPKLETLVFQKNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEFNALPS 397
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIV 226
LQ+L L+ ++ I + + L +L L L+HN+ N I
Sbjct: 398 LQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPIT 457
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
E+N F + LK +C + I+ ++ +L LDLG N
Sbjct: 458 ELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKK 517
Query: 287 XXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL- 345
N ++ SFS L+ L L N L+ F+ L L+ L + +NK+
Sbjct: 518 LQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKLGFNKIT 577
Query: 346 -DRLEVASFDP-IE-NSLRDLKISG 367
+ + P I+ SL+ L + G
Sbjct: 578 YETTRTLQYPPFIKLKSLKQLNLEG 602
Score = 118 (46.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 39/150 (26%), Positives = 69/150 (46%)
Query: 302 EKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
+ F++ LQ L L + +L+ + +++L NL LD+S+NK +F P+++ L
Sbjct: 389 DSEFNALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKH-LE 447
Query: 362 DLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQD 421
L +S N I A T I + F P+L+ L+L NN++
Sbjct: 448 FLSLSRNPITELNNLAFSGLFALKELNLAACWIVT-IDRYSFTQFPNLEVLDLGDNNIRT 506
Query: 422 IHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
+++ ++ KL L LS N K + S+
Sbjct: 507 LNHGTFRPLKKLQSLILSHNCLKILEPNSF 536
Score = 106 (42.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F L +L + + I I F G+ +L LNL N I S+ + +F+G+ +L+ L L
Sbjct: 123 FTNLSALVDLRLEWNSIWKIDEGAFRGLENLTLLNLVENKIQSV-NNSFEGLSSLKTLLL 181
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
N+I I F L L+ LSL+ N IS
Sbjct: 182 SHNQITHIHKDAFTPLIKLKYLSLSRNNIS 211
Score = 103 (41.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
++ L++T++ I + F + +L L L N+I + + F+G+ NL L L NK
Sbjct: 103 RYTTHLNLTHNEIQVLPPWSFTNLSALVDLRLEWNSIWKIDEGAFRGLENLTLLNLVENK 162
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
I+S+ +S F LS L+ L L+HN+I+ + N+I + + I + +
Sbjct: 163 IQSVNNS-FEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRNNISDFSG-ILEAV 220
Query: 237 QELKTFKCRSCGLENINPMMY 257
Q L + L N N +MY
Sbjct: 221 QHLPCLE--RLDLTN-NSIMY 238
Score = 81 (33.6 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 31/132 (23%), Positives = 53/132 (40%)
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK-LDRLEVASFDPIENSLRDLKISGN 368
KL+ L ++N T L+ LD+ N L L + F+ + SL+ L + N
Sbjct: 348 KLETLVFQKNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEFNALP-SLQKLNL--N 404
Query: 369 NIQXXXXXXXX-XXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLY 427
Q ++ + P F HL+FL+LS N + +++NL +
Sbjct: 405 KCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPITELNNLAF 464
Query: 428 QSNIKLTHLDLS 439
L L+L+
Sbjct: 465 SGLFALKELNLA 476
Score = 62 (26.9 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 25/109 (22%), Positives = 53/109 (48%)
Query: 91 GTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTH 150
G E L ++ EN ++ F+ L+ L ++++ I I F + L+YL+L+
Sbjct: 149 GLENLTLLNLVENKIQ-SVNNSFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSR 207
Query: 151 NNITSLLDYNFKGMMNLQELYLDFNKIESIPSSV-FMHLSDLRVLSLAH 198
NNI+ +F G++ + +++ +S+ ++ S ++SL H
Sbjct: 208 NNIS-----DFSGILEAVQHLPCLERLDLTNNSIMYLDHSPRSLVSLTH 251
Score = 49 (22.3 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE-------SIPS 182
+P L L+LT+N+I LD++ + +++L L + NK+ S+P+
Sbjct: 223 LPCLERLDLTNNSIM-YLDHSPRSLVSLTHLSFEGNKLRELNFSALSLPN 271
Score = 47 (21.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 8 MSKLKSLDLSYNDIVEINPEIF 29
+S LK+L LS+N I I+ + F
Sbjct: 173 LSSLKTLLLSHNQITHIHKDAF 194
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+S L L L +N I +I+ F+ +++ T+L
Sbjct: 126 LSALVDLRLEWNSIWKIDEGAFRGLENLTLL 156
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 47/147 (31%), Positives = 74/147 (50%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S + CP C C+ + R ++C R D+A +P + + T L + +EN +
Sbjct: 51 SPPATSCPVACSCS-NQASR--VICTRRDLAE-VP-ASIPVNTRYLNL---QENGIQVIR 102
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F+ +HLE L ++ + + I F G+PSL L L N +T++ F+ + L+E
Sbjct: 103 TDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRE 162
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSL 196
L+L N IESIPS F + LR L L
Sbjct: 163 LWLRNNPIESIPSYAFNRVPSLRRLDL 189
Score = 150 (57.9 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 57/219 (26%), Positives = 85/219 (38%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P + RYLNL N I + FK + +L+ L L N + I F L L L L
Sbjct: 84 IPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD 143
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG-LENINPMMY 257
NR++ + + N I I F + L+ LE I+ +
Sbjct: 144 NRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAF 203
Query: 258 SILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLK 317
L +L YL+LG GN +I SF L+ L L
Sbjct: 204 EGLVNLRYLNLG--MCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM 261
Query: 318 RNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
++A + AF +L +L EL++S+N L L F P+
Sbjct: 262 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL 300
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 173 (66.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 72/290 (24%), Positives = 116/290 (40%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A+ CP C C +D C ++ +P +D T L + S N L G
Sbjct: 29 AAPACPAPCRCQ-EDGIMLSADCSELGLS-AVP-RDLDPLTAYLDL--SMNNLTELQPG- 82
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
+F + LEEL ++ + + I H F G+ SL+ L L +N + + + +LQ L
Sbjct: 83 LFHHLRFLEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADALWELPSLQSLR 142
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
LD N I +P F LS LR L L N ++++ R N I I
Sbjct: 143 LDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDY 202
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F+++ L + ++++ + L +L LDL YN+
Sbjct: 203 AFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPVAIRTLGRLQELGF 262
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
N+ I EK+F LQ + N + V +AF +L L L ++
Sbjct: 263 H-NNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSAFQDLPKLHTLSLN 311
Score = 162 (62.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 66/257 (25%), Positives = 100/257 (38%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
FQ L LH+ N+ I +G H F G+ +L L+L +N + + + LQEL
Sbjct: 204 FQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQEF-PVAIRTLGRLQELGF 262
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXX-XXXXXXXXXYNDIVEINPE 231
N I++IP FM L+ + N I + DI E P+
Sbjct: 263 HNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSAFQDLPKLHTLSLNGATDIQEF-PD 321
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+ K L+ G+ + P M L L L+L +NQ
Sbjct: 322 L-KGTTSLEILTLTRAGIRLLPPGMCQQLPRLRVLELSHNQIEELPSLHRCQKLEEIGLQ 380
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N I +FS L+ L L N + + AF L +L++LD++ N+L L +A
Sbjct: 381 H--NRIGAIGADTFSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQLSTLPLA 438
Query: 352 SFDPIENSLRDLKISGN 368
L LK+ GN
Sbjct: 439 GL----GGLMHLKLRGN 451
Score = 47 (21.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 403 FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
F L+ L+LS N ++ IH + + L LDL+ N+
Sbjct: 392 FSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQ 431
Score = 47 (21.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 14 LDLSYNDIVEINPEIFKDIQ 33
LDLS N++ E+ P +F ++
Sbjct: 69 LDLSMNNLTELQPGLFHHLR 88
>UNIPROTKB|Q9MYW3 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9796 "Equus
caballus" [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0042116 "macrophage activation" evidence=ISS]
[GO:0046696 "lipopolysaccharide receptor complex" evidence=ISS]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR017241
InterPro:IPR027168 Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0006954 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0042116 GO:GO:0004888 GO:GO:0046696
SUPFAM:SSF52200 GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 CTD:7099 eggNOG:NOG249751
HOGENOM:HOG000037951 KO:K10160 OrthoDB:EOG4P8FHQ EMBL:AY005808
RefSeq:NP_001093239.1 UniGene:Eca.2625 ProteinModelPortal:Q9MYW3
SMR:Q9MYW3 STRING:Q9MYW3 GeneID:100066890 KEGG:ecb:100066890
InParanoid:Q9MYW3 Uniprot:Q9MYW3
Length = 843
Score = 115 (45.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 44/173 (25%), Positives = 76/173 (43%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+ + +F +L+ L + + L + + F +L NL LDISY + FD +
Sbjct: 413 ISMSSNFMGLEQLEHLDFQHSTLKQASDFPVFLSLKNLRYLDISYTNTRVVFHGIFDGLV 472
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
SL+ LK++GN+ + ++ N + + F + P L+ LN+S N
Sbjct: 473 -SLQVLKMAGNSFKDNFLPNIFREMTNLTTLDLSKCNLEQVSQEAFCLLPRLRVLNMSHN 531
Query: 418 NLQDIHNLLYQSNIKLTHLDLSRNKFKGF--DEKSYIMSEPKNIHKAAKNSFA 468
NL + L Y+ L LD S N+ F E + S +++ +N FA
Sbjct: 532 NLLFLDMLPYKPLHSLQILDCSFNRIVAFKWQELQHFPSSLASLN-LTQNDFA 583
Score = 107 (42.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/150 (24%), Positives = 64/150 (42%)
Query: 120 EELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES 179
+EL ++ + + +G H F P L+ L+L+ I + D ++G+ +L L L N I S
Sbjct: 57 KELDLSFNPLKELGSHSFSNFPELQVLDLSRCEIEMIEDDAYQGLNHLSTLILTGNPIRS 116
Query: 180 IPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN-PEIFKDIQE 238
+ F LS L+ L ++S L +N I PE F +
Sbjct: 117 LALGAFSGLSSLQTLVAVETKLSSLEKFPIGHLKTLKELNVAHNLIHSFKLPEYFSKMPN 176
Query: 239 LKTFKCRSCGLENINPMMYSILADLIYLDL 268
L+ + ++NI+ +L + L+L
Sbjct: 177 LEHLDLSNNKIQNISHEDLRVLHQMPLLNL 206
Score = 105 (42.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 46/180 (25%), Positives = 74/180 (41%)
Query: 88 MDLGT-EVLKIVPSEENPNHLTIGPI-------FQQFQHLEELHITNSFIPAIGFHPFWG 139
MDL ++ + +P+ L+ P+ F F L+ L ++ I I + G
Sbjct: 41 MDLNLYKIPENIPTSTKELDLSFNPLKELGSHSFSNFPELQVLDLSRCEIEMIEDDAYQG 100
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
+ L L LT N I SL F G+ +LQ L K+ S+ HL L+ L++AHN
Sbjct: 101 LNHLSTLILTGNPIRSLALGAFSGLSSLQTLVAVETKLSSLEKFPIGHLKTLKELNVAHN 160
Query: 200 RISKLA-PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE-NINPMMY 257
I P N I I+ E D++ L + L+ ++NP+ +
Sbjct: 161 LIHSFKLPEYFSKMPNLEHLDLSNNKIQNISHE---DLRVLHQMPLLNLSLDLSLNPLEF 217
Score = 64 (27.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 407 PHLQFLNLSGNNLQDIHNLLYQSNIKLT---HLDLSRNKFKGFDEKSYIMSEPKNIHKAA 463
P L+FL+LS N L + ++++K T HLDLS N S M + H
Sbjct: 374 PSLEFLDLSRNRLS-FKSCCSEADLKTTRLKHLDLSFNDV--ISMSSNFMGLEQLEHLDF 430
Query: 464 KNSFALQSSMGKNAEYAVFIASSSISYL 491
++S Q+S ++ VF++ ++ YL
Sbjct: 431 QHSTLKQAS-----DFPVFLSLKNLRYL 453
Score = 60 (26.2 bits), Expect = 9.7e-05, Sum P(2) = 9.6e-05
Identities = 22/104 (21%), Positives = 39/104 (37%)
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
+EL L FN ++ + S F + +L+VL L+ I + N I
Sbjct: 57 KELDLSFNPLKELGSHSFSNFPELQVLDLSRCEIEMIEDDAYQGLNHLSTLILTGNPIRS 116
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
+ F + L+T L ++ L L L++ +N
Sbjct: 117 LALGAFSGLSSLQTLVAVETKLSSLEKFPIGHLKTLKELNVAHN 160
Score = 53 (23.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 13 SLDLSYNDIVEINPEIFKDIQ 33
SLDLS N + I P+ FK+I+
Sbjct: 207 SLDLSLNPLEFIQPDAFKEIK 227
>UNIPROTKB|F1P2C4 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00823432 Ensembl:ENSGALT00000038578
ArrayExpress:F1P2C4 Uniprot:F1P2C4
Length = 423
Score = 150 (57.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 45/151 (29%), Positives = 76/151 (50%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQ 115
CP +C C+ +++C R ++ + +P G + T +L + EN + F+
Sbjct: 24 CPSVCSCSNQFS---KVICVRKNLRD-VPDG-ISTNTRLLNL---HENQIQIIKVNSFKH 75
Query: 116 FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN 175
+HLE L ++ + I I F G+ +L L L N +T++ + F + L+EL+L N
Sbjct: 76 LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNN 135
Query: 176 KIESIPSSVFMHLSDLRVLSLAH-NRISKLA 205
IESIPS F + LR L L R+S ++
Sbjct: 136 PIESIPSYAFNRIPSLRRLDLGELKRLSYIS 166
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 55/215 (25%), Positives = 88/215 (40%)
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
R LNL N I + +FK + +L+ L L N I +I F L++L L L NR++
Sbjct: 56 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 115
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEI-FKDIQELKTFKCRSCG-LENINPMMYSILA 261
+ P N+ +E P F I L+ L I+ + L+
Sbjct: 116 I-PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 174
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L YL+L GNH I SF LQ L + ++++
Sbjct: 175 NLRYLNLA--MCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQGLMHLQKLWMIQSQI 232
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
+ AF NL +L+E+++++N L L F P+
Sbjct: 233 QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 267
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 42/149 (28%), Positives = 70/149 (46%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I SF L++L L RN + + AF L NL L++ N+L + +F
Sbjct: 63 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 122
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXX--XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
+ + L++L + N I+ + ++Y I +G F+ +L++L
Sbjct: 123 YL-SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY--ISEGAFEGLSNLRYL 179
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
NL+ NL++I NL +KL LDLS N
Sbjct: 180 NLAMCNLREIPNLT--PLVKLDELDLSGN 206
Score = 61 (26.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNN 369
KL L L N L + +F L +L +L + +++ +E +FD ++ SL ++ ++ NN
Sbjct: 197 KLDELDLSGNHLTAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ-SLVEINLAHNN 255
Query: 370 I 370
+
Sbjct: 256 L 256
>UNIPROTKB|F1MG02 [details] [associations]
symbol:ECM2 "Extracellular matrix protein 2" species:9913
"Bos taurus" [GO:0070052 "collagen V binding" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0010811 "positive regulation of cell-substrate adhesion"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0005614 "interstitial matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 Pfam:PF00093 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS51450 SMART:SM00214 GO:GO:0030198
GO:GO:0008201 GO:GO:0010811 GeneTree:ENSGT00700000104006
GO:GO:0005614 IPI:IPI00692442 OMA:AVWSPKP EMBL:DAAA02024048
EMBL:DAAA02024049 Ensembl:ENSBTAT00000015726 Uniprot:F1MG02
Length = 679
Score = 171 (65.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES--IPSSVFMHLSDLRVLSLAH 198
P + L L N+ITS+ D F G+ NL+ L L N I S I F L +L L++
Sbjct: 324 PEITSLELIDNSITSIPDEAFNGL-NLERLDLSKNNITSSGIGPKAFKFLKNLMRLNMDG 382
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE--NINPMM 256
N + + N + I+ E D+ +L T + L N+N +
Sbjct: 383 NNLVTIPSELPSTLEELKINE---NKLQVIDEESLSDLNQLVTLELEGNNLSETNVNSLA 439
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L L YL LG N+ N I E SF+ K+ V+ L
Sbjct: 440 FKPLKSLSYLRLGRNKFRIIPQGLPASIEELYLE---NNQIEEITEISFNHTRKINVIGL 496
Query: 317 KRNRLA--KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
+ N++ ++ A+ N NL +D+SYNKL V S+ P SL L + GN I+
Sbjct: 497 RYNKIEENRIAPLAWINQENLESIDLSYNKL--YHVPSYLP--KSLVHLVLIGNQIE 549
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 78/349 (22%), Positives = 134/349 (38%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITS--LLDYNFKGMMNLQELYLDFNK 176
+ L + ++ I +I F G+ +L L+L+ NNITS + FK + NL L +D N
Sbjct: 326 ITSLELIDNSITSIPDEAFNGL-NLERLDLSKNNITSSGIGPKAFKFLKNLMRLNMDGNN 384
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE--INPEIFK 234
+ +IPS + L +L++ N++ + N++ E +N FK
Sbjct: 385 LVTIPSELPSTLEELKI---NENKLQVIDEESLSDLNQLVTLELEGNNLSETNVNSLAFK 441
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
++ L + G + + A + L L NQ
Sbjct: 442 PLKSLSYLRL---GRNKFRIIPQGLPASIEELYLENNQIEEITEISFNHTRKINVIGLRY 498
Query: 295 NHFPV--ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N I ++ +Q L+ + L N+L V + +L +L+ + N+++R+
Sbjct: 499 NKIEENRIAPLAWINQENLESIDLSYNKLYHVPSYLPKSLVHLVLIG---NQIERIPGYV 555
Query: 353 FDPIENSLRDLKISGNN-IQXXXXXXXXXXXXXXXXXXIADMN-YTDIPKGLFKMNPHLQ 410
F +E L L +S N + D N IP G+ +M L
Sbjct: 556 FGHMEPGLEYLYLSFNKLVDDGIDRVSFYGAYHSLRELFLDHNELKSIPPGVQEMKA-LH 614
Query: 411 FLNLSGNNLQDIH-----NLLYQSNIKLTHLDLSRNKFKGFDEKSYIMS 454
FL L+ N +++I N + L HL L N K + SY S
Sbjct: 615 FLRLNNNKIRNILPEQICNAEEDDDSNLQHLHLENNYIKTREIPSYAFS 663
>UNIPROTKB|F1LN63 [details] [associations]
symbol:Tlr3 "Protein Tlr3" species:10116 "Rattus
norvegicus" [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007252 "I-kappaB phosphorylation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0034346 "positive
regulation of type III interferon production" evidence=IEA]
[GO:0042346 "positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=IEA] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 RGD:735171 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0009615 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 InterPro:IPR000372 SMART:SM00013 GO:GO:0032760
GO:GO:0043330 GO:GO:0032735 GO:GO:0042346 GO:GO:0045078
InterPro:IPR026906 Pfam:PF13306 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:WINKTHT IPI:IPI00382156
Ensembl:ENSRNOT00000035781 ArrayExpress:F1LN63 Uniprot:F1LN63
Length = 905
Score = 169 (64.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 69/273 (25%), Positives = 112/273 (41%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNL--THNNITSLLDYNFKGMMN--LQ 168
FQ + LE L++ ++ IP I + F G+ SL+YL+L T + +L + F + + L
Sbjct: 352 FQWLKCLEHLNMDDNTIPGIKSNTFTGLVSLKYLSLSKTFTGLQTLTNETFVSLTHSPLL 411
Query: 169 ELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK-LAPRXXXXXXXXXXXXXXYNDIVE 227
L L N I I S F L LR+L L N I + L + YN ++
Sbjct: 412 TLNLTKNHISKIASGTFSWLGQLRILDLGLNEIEQELTGQEWRGLGNIFEIYLSYNKYLQ 471
Query: 228 INPEIFKDIQELKTFKCRSCGLEN--INPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ + F + L+ R L++ I+P + L +L LDL N
Sbjct: 472 LTSKSFTLVPSLQRLMLRRVALKSVDISPSPFRPLYNLTILDLSNNNIANLNEDLLEGLE 531
Query: 286 XXXXXXXXGNHFPVILEKS--------FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIE 337
N+ + + + L +L L+ N L ++ F NL L
Sbjct: 532 NLEILDFQHNNLARLWKHANPGGPVNFLKGLSHLHILNLESNGLDEIPVKVFKNLFELKS 591
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
+++ N L+ L + FD + SLR L + N I
Sbjct: 592 INLGLNNLNTLLPSIFDD-QTSLRSLNLQKNLI 623
Score = 152 (58.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 84/340 (24%), Positives = 132/340 (38%)
Query: 118 HLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD--FN 175
+L L ++ + + +G F +P L+YL+L +NNI SL ++F+G+ NL+ L L F
Sbjct: 276 NLTSLDLSYNSLRYVGNDAFSWLPHLKYLSLEYNNIQSLTPHSFRGLSNLRYLSLKRAFT 335
Query: 176 K----IESIPSS---VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXX--XXXXXYNDIV 226
K + S P+ F L L L++ N I + + +
Sbjct: 336 KQSVALASHPNIDDFSFQWLKCLEHLNMDDNTIPGIKSNTFTGLVSLKYLSLSKTFTGLQ 395
Query: 227 EINPEIFKDIQE--LKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXX 284
+ E F + L T + I +S L L LDLG N+
Sbjct: 396 TLTNETFVSLTHSPLLTLNLTKNHISKIASGTFSWLGQLRILDLGLNEIEQELTGQEWRG 455
Query: 285 XXXXXXXXXG-NHFPVILEKSFSSQFKLQVLCLKRNRLAKV--TTTAFTNLTNLIELDIS 341
N + + KSF+ LQ L L+R L V + + F L NL LD+S
Sbjct: 456 LGNIFEIYLSYNKYLQLTSKSFTLVPSLQRLMLRRVALKSVDISPSPFRPLYNLTILDLS 515
Query: 342 YNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKG 401
N + L + +EN L L NN+ +N+ KG
Sbjct: 516 NNNIANLNEDLLEGLEN-LEILDFQHNNLARLWKHANPG----------GPVNFL---KG 561
Query: 402 LFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
L HL LNL N L +I ++++ +L ++L N
Sbjct: 562 L----SHLHILNLESNGLDEIPVKVFKNLFELKSINLGLN 597
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 67/303 (22%), Positives = 113/303 (37%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ L L N++ +P + F S L +L N ISKL P +N++
Sbjct: 53 NITVLNLTHNQLRGLPPANFTRYSQLALLDAGFNSISKLEPELCQILPLLKVLNLQHNEL 112
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+I+ + F L S + I + LI LDL N
Sbjct: 113 SQISDQTFAFCTNLTELHLMSNSIRKIKSNPFKNQKSLIKLDLSRNGLSSTKLGTGVQLE 172
Query: 286 XXXXXXXXGNH-FPVILEK-SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N F + E+ F LQ L L N L + + F + L L ++
Sbjct: 173 NLQELLLAKNKIFALRSEELDFLGNSSLQKLDLSSNPLKEFSPGCFHAIGKLFVLLLNNA 232
Query: 344 KLDR--LEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD---I 398
+L+ E ++ S+++L ++ N Q D++Y +
Sbjct: 233 QLNLNLTEKLCWELSNTSIQNLSLANN--QLLATSNSTFSGLKQTNLTSLDLSYNSLRYV 290
Query: 399 PKGLFKMNPHLQFLNLSGNNLQDI--HNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEP 456
F PHL++L+L NN+Q + H+ SN++ +L L R F ++S ++
Sbjct: 291 GNDAFSWLPHLKYLSLEYNNIQSLTPHSFRGLSNLR--YLSLKR----AFTKQSVALASH 344
Query: 457 KNI 459
NI
Sbjct: 345 PNI 347
Score = 135 (52.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 74/313 (23%), Positives = 110/313 (35%)
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
+P L+ LNL HN ++ + D F NL EL+L N I I S+ F + L L L+ N
Sbjct: 99 LPLLKVLNLQHNELSQISDQTFAFCTNLTELHLMSNSIRKIKSNPFKNQKSLIKLDLSRN 158
Query: 200 RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI--FKDIQELKTFKCRSCGLENINPMMY 257
+S N I + E F L+ S L+ +P +
Sbjct: 159 GLSSTKLGTGVQLENLQELLLAKNKIFALRSEELDFLGNSSLQKLDLSSNPLKEFSPGCF 218
Query: 258 SILADLIYLDLGYNQXXXXXXXXX---XXXXXXXXXXXXGNHFPVILEKSFSS--QFKLQ 312
+ L L L Q N +FS Q L
Sbjct: 219 HAIGKLFVLLLNNAQLNLNLTEKLCWELSNTSIQNLSLANNQLLATSNSTFSGLKQTNLT 278
Query: 313 VLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQX 372
L L N L V AF+ L +L L + YN + L SF + N LR L +
Sbjct: 279 SLDLSYNSLRYVGNDAFSWLPHLKYLSLEYNNIQSLTPHSFRGLSN-LRYLSLK------ 331
Query: 373 XXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIK 432
+A ++ +I F+ L+ LN+ N + I + + +
Sbjct: 332 ----------RAFTKQSVALASHPNIDDFSFQWLKCLEHLNMDDNTIPGIKSNTFTGLVS 381
Query: 433 LTHLDLSRNKFKG 445
L +L LS+ F G
Sbjct: 382 LKYLSLSKT-FTG 393
Score = 118 (46.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 54/237 (22%), Positives = 92/237 (38%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITS-LLDYNFKGMMNLQELYLDFNKIESI 180
L++T + I I F + LR L+L N I L ++G+ N+ E+YL +NK +
Sbjct: 413 LNLTKNHISKIASGTFSWLGQLRILDLGLNEIEQELTGQEWRGLGNIFEIYLSYNKYLQL 472
Query: 181 PSSVFMHLSDLRVLSLAHNRISK--LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
S F + L+ L L + ++P N+I +N ++ + ++
Sbjct: 473 TSKSFTLVPSLQRLMLRRVALKSVDISPSPFRPLYNLTILDLSNNNIANLNEDLLEGLEN 532
Query: 239 LKTFKCRSCGLENI----NP----MMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
L+ + L + NP L+ L L+L N
Sbjct: 533 LEILDFQHNNLARLWKHANPGGPVNFLKGLSHLHILNLESNGLDEIPVKVFKNLFELKSI 592
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAF-TNLTNLIELDISYNKLD 346
N+ +L F Q L+ L L++N + V + F NL LD+S+N D
Sbjct: 593 NLGLNNLNTLLPSIFDDQTSLRSLNLQKNLITSVEKSVFGPAFHNLNSLDMSFNPFD 649
Score = 50 (22.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 7 FMSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
++ LK L L YN+I + P F+ + + L
Sbjct: 297 WLPHLKYLSLEYNNIQSLTPHSFRGLSNLRYL 328
Score = 48 (22.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 2 EFTLIFMSKLKSLDLSYNDIVEINPEIFKDI 32
E + S L+ LDLS N + E +P F I
Sbjct: 191 ELDFLGNSSLQKLDLSSNPLKEFSPGCFHAI 221
Score = 46 (21.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 3 FTLIFMSKLKSLDLSYNDIVEINPEIF 29
F+ + + L SLDLSYN + + + F
Sbjct: 269 FSGLKQTNLTSLDLSYNSLRYVGNDAF 295
>UNIPROTKB|Q2V898 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9917 "Boselaphus
tragocamelus" [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISS] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045087 GO:GO:0005622 GO:GO:0004888
GO:GO:0046696 SUPFAM:SSF52200 GO:GO:0001875 GO:GO:0032497
EMBL:DQ286730 ProteinModelPortal:Q2V898 SMR:Q2V898
HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9 Uniprot:Q2V898
Length = 841
Score = 136 (52.9 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 52/201 (25%), Positives = 85/201 (42%)
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRIS-K-LAPRXXXXXXXXXXXXXXYNDIVEINPE 231
F + I S L L+ L L N +S K +ND++ +
Sbjct: 358 FTDNKDISSFTEFQLPSLQYLDLRRNHLSFKGCCSHADFGTTNLKHLDLSFNDVITLGSN 417
Query: 232 IFKDIQELKTFKCRSCGLENINPM-MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
F +++L+ + L+ IN ++ L +L YLD+ Y
Sbjct: 418 -FMGLEKLEHLDFQHSTLKQINAFSVFLSLRNLRYLDISYTNVRIVFHGIFTGLVSLKTL 476
Query: 291 XXXGNHFPV-ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
GN F +L F+ L VL L + +L +V TAF +L++L L++S+NKL L+
Sbjct: 477 KMAGNTFQDNLLPDIFTELTNLTVLDLSKCQLEQVAQTAFHSLSSLQVLNMSHNKLLSLD 536
Query: 350 VASFDPIENSLRDLKISGNNI 370
++P+ + LR L S N I
Sbjct: 537 TFLYEPL-HLLRILDCSFNRI 556
Score = 121 (47.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 44/173 (25%), Positives = 74/173 (42%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+ L +F KL+ L + + L ++ + F +L NL LDISY + + F +
Sbjct: 412 ITLGSNFMGLEKLEHLDFQHSTLKQINAFSVFLSLRNLRYLDISYTNVRIVFHGIFTGLV 471
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
SL+ LK++GN Q ++ + + F LQ LN+S N
Sbjct: 472 -SLKTLKMAGNTFQDNLLPDIFTELTNLTVLDLSKCQLEQVAQTAFHSLSSLQVLNMSHN 530
Query: 418 NLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIH--KAAKNSFA 468
L + LY+ L LD S N+ E+ + + P+N+ +N+FA
Sbjct: 531 KLLSLDTFLYEPLHLLRILDCSFNRIMDSKEQD-LQNLPRNLTWLNLTQNAFA 582
Score = 100 (40.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 35/148 (23%), Positives = 62/148 (41%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L ++ +++ +G H F P L+ L+L+ I + D F+G+ +L L L N I+S+
Sbjct: 59 LDLSFNYLRHLGSHNFSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLILTGNPIQSLA 118
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN-PEIFKDIQELK 240
F LS L+ L + L +N I PE F ++ L+
Sbjct: 119 WGAFSGLSSLQKLVAVETNLVSLNDFPIGHLKTLKELNVAHNFIHSFKLPEYFSNLPNLE 178
Query: 241 TFKCRSCGLENINPMMYSILADLIYLDL 268
+ ++NI +L + L+L
Sbjct: 179 HLDLSNNKIQNIYYEDVKVLHQMPLLNL 206
Score = 98 (39.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 39/145 (26%), Positives = 60/145 (41%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F F L+ L ++ I I F G+ L L LT N I SL F G+ +LQ+L
Sbjct: 74 FSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLILTGNPIQSLAWGAFSGLSSLQKLVA 133
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA-PRXXXXXXXXXXXXXXYNDIVEINPE 231
+ S+ HL L+ L++AHN I P N I I
Sbjct: 134 VETNLVSLNDFPIGHLKTLKELNVAHNFIHSFKLPEYFSNLPNLEHLDLSNNKIQNI--- 190
Query: 232 IFKDIQELKTFKCRSCGLE-NINPM 255
++D++ L + L+ ++NP+
Sbjct: 191 YYEDVKVLHQMPLLNLSLDLSLNPL 215
Score = 91 (37.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 35/135 (25%), Positives = 55/135 (40%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P S + L+L+ N + L +NF LQ L L +I+ I F L+ L L L
Sbjct: 52 IPISTKMLDLSFNYLRHLGSHNFSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLILTG 111
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENIN-PMMY 257
N I LA ++V +N ++ LK + + P +
Sbjct: 112 NPIQSLAWGAFSGLSSLQKLVAVETNLVSLNDFPIGHLKTLKELNVAHNFIHSFKLPEYF 171
Query: 258 SILADLIYLDLGYNQ 272
S L +L +LDL N+
Sbjct: 172 SNLPNLEHLDLSNNK 186
Score = 80 (33.2 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 48/185 (25%), Positives = 81/185 (43%)
Query: 15 DLSYNDIVEINP-EIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIV 73
++SY +E+N +I +I +T + ++ F YL H + + E + D R EI
Sbjct: 35 NISYQ-CMELNLYKIPDNIPISTKMLDLS-FNYLRHLGSHNFSSFP-ELQVLDLSRCEIK 91
Query: 74 CRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIG 133
D G L T +L P + L G F L++L + + ++
Sbjct: 92 IIEDDTFQ----GLNHLSTLILTGNPIQS----LAWGA-FSGLSSLQKLVAVETNLVSLN 142
Query: 134 FHPFWGVPSLRYLNLTHNNITSL-LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLR 192
P + +L+ LN+ HN I S L F + NL+ L L NKI++I L +
Sbjct: 143 DFPIGHLKTLKELNVAHNFIHSFKLPEYFSNLPNLEHLDLSNNKIQNIYYEDVKVLHQMP 202
Query: 193 VLSLA 197
+L+L+
Sbjct: 203 LLNLS 207
Score = 49 (22.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 81 NPIPIGQMDLGTEVLKIVPSEENPNH-LTIGPIFQQFQHLEELHITNSFIPAIGFHPFWG 139
N PIG + + LK + N H + F +LE L ++N+ I I +
Sbjct: 142 NDFPIGHL----KTLKELNVAHNFIHSFKLPEYFSNLPNLEHLDLSNNKIQNIYYEDVKV 197
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
+ + LNL+ + + LD+ G +E+ L+ + S +S H+ + LA
Sbjct: 198 LHQMPLLNLSLDLSLNPLDFIEPG--TFKEIKLNGLTLRSNFNS--SHVMKTCIQGLAGL 253
Query: 200 RISKL 204
+I++L
Sbjct: 254 KINRL 258
Score = 48 (22.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 13 SLDLSYNDIVEINPEIFKDIQ 33
SLDLS N + I P FK+I+
Sbjct: 207 SLDLSLNPLDFIEPGTFKEIK 227
>RGD|620226 [details] [associations]
symbol:Prelp "proline/arginine-rich end leucine-rich repeat
protein" species:10116 "Rattus norvegicus" [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=TAS]
[GO:0007569 "cell aging" evidence=IEA;ISO] [GO:0008201 "heparin
binding" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027216
PROSITE:PS51450 RGD:620226 GO:GO:0005578 eggNOG:COG4886
GO:GO:0008201 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0007569 GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:5549 KO:K08125 OrthoDB:EOG44F69H
PANTHER:PTHR24371:SF15 OMA:NKLEHLY EMBL:AF163569 EMBL:BC072487
IPI:IPI00190287 RefSeq:NP_445837.1 UniGene:Rn.112602
ProteinModelPortal:Q9EQP5 PRIDE:Q9EQP5 Ensembl:ENSRNOT00000004241
GeneID:84400 KEGG:rno:84400 UCSC:RGD:620226 InParanoid:Q9EQP5
NextBio:616827 Genevestigator:Q9EQP5 GermOnline:ENSRNOG00000003120
Uniprot:Q9EQP5
Length = 377
Score = 114 (45.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L++ N+FI + F LR++NL +N I + + + L LY+D N++E +P
Sbjct: 102 LYLQNNFITELPVESFKNATGLRWINLDNNRIRKVDQRVLEKLPGLAFLYMDKNQLEEVP 161
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAP 206
S++ +L LR L+ N IS++ P
Sbjct: 162 SALPRNLEQLR---LSQNLISRIPP 183
Score = 98 (39.6 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDR--LEVASFDPIENSLRDLKISGN 368
L+ L L +N ++++ F+ L NL+ LD+ +N+L + +F ++N L L ++ N
Sbjct: 168 LEQLRLSQNLISRIPPGVFSKLENLLLLDLQHNRLSDGVFKADTFQGLKN-LMQLNLAHN 226
Query: 369 NIQXXXXXXXXXXXXXXXXXXIADMNYTD-IPKGLFKMNPHLQFLNLSGNNLQDI---HN 424
++ D N + IP G FK P+L F+ ++ N L D N
Sbjct: 227 ILRRMPPKVPPAIHQLYL-----DSNKIETIPSGYFKDFPNLAFIRMNYNKLSDRGLPKN 281
Query: 425 LLYQSNIKLTHLDLSRNK 442
SN+ + HL S NK
Sbjct: 282 SFNISNLLVLHL--SHNK 297
Score = 91 (37.1 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 105 NHLTIGPI--FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
N +T P+ F+ L +++ N+ I + +P L +L + N + + +
Sbjct: 107 NFITELPVESFKNATGLRWINLDNNRIRKVDQRVLEKLPGLAFLYMDKNQLEEVPSALPR 166
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
NL++L L N I IP VF L +L +L L HNR+S
Sbjct: 167 ---NLEQLRLSQNLISRIPPGVFSKLENLLLLDLQHNRLS 203
Score = 77 (32.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 36/119 (30%), Positives = 51/119 (42%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL-DR-LEVASFDPIENSLRDLKISGNNIQ 371
L L N++ + + F + NL + ++YNKL DR L SF+ I N L L +S N I
Sbjct: 242 LYLDSNKIETIPSGYFKDFPNLAFIRMNYNKLSDRGLPKNSFN-ISNLLV-LHLSHNKIS 299
Query: 372 XXXXXXXXXXXXXXXXXXIADMNYTDI-PKGLFKMN---------PHLQFLNLSGNNLQ 420
I +N T I P L + PHL++L L GN L+
Sbjct: 300 NVPAISNKLEHLYLNNNSIEKINGTQICPSNLVAFHDFSSDLENVPHLRYLRLDGNFLK 358
>RGD|1309449 [details] [associations]
symbol:Rxfp2 "relaxin/insulin-like family peptide receptor 2"
species:10116 "Rattus norvegicus" [GO:0001556 "oocyte maturation"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IEA;ISO] [GO:0007193
"adenylate cyclase-inhibiting G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IDA] [GO:0008584 "male gonad development"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA;ISO]
[GO:0017046 "peptide hormone binding" evidence=IPI] [GO:0030819
"positive regulation of cAMP biosynthetic process" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IDA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
RGD:1309449 GO:GO:0016021 GO:GO:0005886 GO:GO:0043066 GO:GO:0008285
GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007193 GO:GO:0030819 GO:GO:0008584 GO:GO:0017046
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 GO:GO:0001556
GO:GO:0016500 HOVERGEN:HBG026354 GeneTree:ENSGT00650000093266
HOGENOM:HOG000049056 CTD:122042 KO:K04307 OrthoDB:EOG47M1XF
OMA:KILCCAD EMBL:AY906861 IPI:IPI00554091 RefSeq:NP_001012493.1
UniGene:Rn.217421 SMR:Q5ECL0 STRING:Q5ECL0
Ensembl:ENSRNOT00000001197 GeneID:363866 KEGG:rno:363866
UCSC:RGD:1309449 InParanoid:Q5ECL0 NextBio:684380
Genevestigator:Q5ECL0 Uniprot:Q5ECL0
Length = 737
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 54/203 (26%), Positives = 86/203 (42%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ L L NKI +P VF ++LR + L HN I+ ++ R +N I
Sbjct: 121 NVTLLSLKKNKIHRLPVKVFSKYAELRKIFLQHNCITHISRRAFLGLHNLQILYLSHNCI 180
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ P IFKD+ +L + I+ ++ L L +L + N+
Sbjct: 181 TSLRPGIFKDLHQLAWLILDDNPITRISQRSFTGLNSLFFLSMVSNRLEALPERLCAQMP 240
Query: 286 XXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
N I +F + L VL L RN++ V F++L NL ELD+S N +
Sbjct: 241 QLNWVDLANNGIKFITNSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNVI 300
Query: 346 DRLEVASFDPIENSLRDLKISGN 368
+L F + + L+ L +S N
Sbjct: 301 AKLPAHLFSDL-HLLQKLNLSSN 322
Score = 149 (57.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 64/265 (24%), Positives = 100/265 (37%)
Query: 71 EIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIP 130
E+ C D+ +P ++ +L + ++N H +F ++ L ++ + ++ I
Sbjct: 104 ELECVNADL-KAVP--KVSSNVTLLSL---KKNKIHRLPVKVFSKYAELRKIFLQHNCIT 157
Query: 131 AIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSD 190
I F G+ +L+ L L+HN ITSL FK + L L LD N I I F L+
Sbjct: 158 HISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQRSFTGLNS 217
Query: 191 LRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE 250
L LS+ NR+ L R N I I F L +
Sbjct: 218 LFFLSMVSNRLEALPERLCAQMPQLNWVDLANNGIKFITNSTFLTCDSLTVLFLPRNQIG 277
Query: 251 NINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFK 310
+ +S L +L LDL N N + + F S +
Sbjct: 278 FVPEKTFSSLKNLGELDLSSNVIAKLPAHLFSDLHLLQKLNLSSNPLLYVHKNQFGSLKQ 337
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNL 335
LQ L L+R + + T F + NL
Sbjct: 338 LQSLDLERIEIPNINTGMFRPMKNL 362
Score = 138 (53.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 52/200 (26%), Positives = 80/200 (40%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L N I L F L++++L N I I F+ L +L++L L+HN I+ L
Sbjct: 125 LSLKKNKIHRLPVKVFSKYAELRKIFLQHNCITHISRRAFLGLHNLQILYLSHNCITSLR 184
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
P N I I+ F + L S LE + + + + L +
Sbjct: 185 PGIFKDLHQLAWLILDDNPITRISQRSFTGLNSLFFLSMVSNRLEALPERLCAQMPQLNW 244
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
+DL N N + EK+FSS L L L N +AK+
Sbjct: 245 VDLANNGIKFITNSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNVIAKLP 304
Query: 326 TTAFTNLTNLIELDISYNKL 345
F++L L +L++S N L
Sbjct: 305 AHLFSDLHLLQKLNLSSNPL 324
>UNIPROTKB|F1M602 [details] [associations]
symbol:Rxfp2 "Protein Rxfp2" species:10116 "Rattus
norvegicus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 RGD:1309449 GO:GO:0016021
GO:GO:0004930 InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 IPI:IPI00947717
ProteinModelPortal:F1M602 Ensembl:ENSRNOT00000066252 Uniprot:F1M602
Length = 737
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 54/203 (26%), Positives = 86/203 (42%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ L L NKI +P VF ++LR + L HN I+ ++ R +N I
Sbjct: 121 NVTLLSLKKNKIHRLPVKVFSKYAELRKIFLQHNCITHISRRAFLGLHNLQILYLSHNCI 180
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ P IFKD+ +L + I+ ++ L L +L + N+
Sbjct: 181 TSLRPGIFKDLHQLAWLILDDNPITRISQRSFTGLNSLFFLSMVSNRLEALPERLCAQMP 240
Query: 286 XXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
N I +F + L VL L RN++ V F++L NL ELD+S N +
Sbjct: 241 QLNWVDLANNGIKFITNSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNVI 300
Query: 346 DRLEVASFDPIENSLRDLKISGN 368
+L F + + L+ L +S N
Sbjct: 301 AKLPAHLFSDL-HLLQKLNLSSN 322
Score = 149 (57.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 64/265 (24%), Positives = 100/265 (37%)
Query: 71 EIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIP 130
E+ C D+ +P ++ +L + ++N H +F ++ L ++ + ++ I
Sbjct: 104 ELECVNADL-KAVP--KVSSNVTLLSL---KKNKIHRLPVKVFSKYAELRKIFLQHNCIT 157
Query: 131 AIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSD 190
I F G+ +L+ L L+HN ITSL FK + L L LD N I I F L+
Sbjct: 158 HISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQRSFTGLNS 217
Query: 191 LRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE 250
L LS+ NR+ L R N I I F L +
Sbjct: 218 LFFLSMVSNRLEALPERLCAQMPQLNWVDLANNGIKFITNSTFLTCDSLTVLFLPRNQIG 277
Query: 251 NINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFK 310
+ +S L +L LDL N N + + F S +
Sbjct: 278 FVPEKTFSSLKNLGELDLSSNVIAKLPAHLFSDLHLLQKLNLSSNPLLYVHKNQFGSLKQ 337
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNL 335
LQ L L+R + + T F + NL
Sbjct: 338 LQSLDLERIEIPNINTGMFRPMKNL 362
Score = 138 (53.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 52/200 (26%), Positives = 80/200 (40%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L N I L F L++++L N I I F+ L +L++L L+HN I+ L
Sbjct: 125 LSLKKNKIHRLPVKVFSKYAELRKIFLQHNCITHISRRAFLGLHNLQILYLSHNCITSLR 184
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
P N I I+ F + L S LE + + + + L +
Sbjct: 185 PGIFKDLHQLAWLILDDNPITRISQRSFTGLNSLFFLSMVSNRLEALPERLCAQMPQLNW 244
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
+DL N N + EK+FSS L L L N +AK+
Sbjct: 245 VDLANNGIKFITNSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNVIAKLP 304
Query: 326 TTAFTNLTNLIELDISYNKL 345
F++L L +L++S N L
Sbjct: 305 AHLFSDLHLLQKLNLSSNPL 324
>UNIPROTKB|E2RFX7 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 OMA:YFELKAN EMBL:AAEX03013284
RefSeq:XP_003639854.1 Ensembl:ENSCAFT00000008522 GeneID:100856466
KEGG:cfa:100856466 NextBio:20859498 Uniprot:E2RFX7
Length = 840
Score = 130 (50.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 39/135 (28%), Positives = 58/135 (42%)
Query: 140 VPSLR--YLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
VP R +L+L +N +T L +F G+ N L+L FN I I + F L L+ L +
Sbjct: 61 VPPSRPFHLSLLNNGLTMLHTNDFSGLTNAISLHLGFNNIADIETGAFNGLGLLKQLHIN 120
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
HN + L N I I P F + LK +E++ P ++
Sbjct: 121 HNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIF 180
Query: 258 SILADLIYLDLGYNQ 272
+ L +LDL NQ
Sbjct: 181 RFVP-LTHLDLRGNQ 194
Score = 120 (47.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 43 IFLYLLHSSASVMCPYMCECALDD-RGRYEIVCRRGDMANPIPIGQMDLGTEVL-KIVPS 100
++++LL+SS + + RG + +C + + I + G + L +I
Sbjct: 3 LWIHLLYSSLFACISSQSQSPMSSARGSCDSLCNCEEKDGTMLINCEEKGIKKLSQISVP 62
Query: 101 EENPNHLTIGPIFQQFQHLEELH-ITNSFIPAIGFH--------PFWGVPSLRYLNLTHN 151
P HL++ H + +TN+ +GF+ F G+ L+ L++ HN
Sbjct: 63 PSRPFHLSLLNNGLTMLHTNDFSGLTNAISLHLGFNNIADIETGAFNGLGLLKQLHINHN 122
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
++ L + F G+ NL+ L D N I I S F L+ L+VL L N I L P
Sbjct: 123 SLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPP 177
Score = 97 (39.2 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 26/86 (30%), Positives = 46/86 (53%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L++LHI ++ + + F G+ +L +L +N IT + F + L+ L L+ N IE
Sbjct: 114 LKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIE 173
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKL 204
S+P ++F + L L L N++ L
Sbjct: 174 SLPPNIFRFVP-LTHLDLRGNQLQTL 198
Score = 90 (36.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N V+ E SF + +LQ L L N L K++ F L NL L + YN + + +F+
Sbjct: 397 NRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGLHNLEYLYLEYNAVKEILPGTFN 456
Query: 355 PIENSLRDLKISGNNIQ 371
P+ L+ L ++ N +Q
Sbjct: 457 PMPK-LKVLYLNNNLLQ 472
Score = 74 (31.1 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN +++ F L++L L NR+ + +F NLT L +L ++ N L +L F
Sbjct: 372 GNIIHTLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMF 431
Query: 354 DPIENSLRDLKISGNNIQ 371
+ N L L + N ++
Sbjct: 432 LGLHN-LEYLYLEYNAVK 448
Score = 69 (29.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYT- 396
L + N+++ LE SF + L+ L ++GN++ + N
Sbjct: 392 LHLGNNRIEVLEEGSFINLTR-LQKLYLNGNHL--TKLSRGMFLGLHNLEYLYLEYNAVK 448
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443
+I G F P L+ L L+ N LQ + ++ S + LT ++L N+F
Sbjct: 449 EILPGTFNPMPKLKVLYLNNNLLQVLPPHIF-SGVSLTRINLKTNQF 494
Score = 50 (22.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/116 (21%), Positives = 42/116 (36%)
Query: 252 INPMMYSILADLIYLD---LGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
I+ +M S L + L+ LG N+ GNH + F
Sbjct: 375 IHTLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGL 434
Query: 309 FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLK 364
L+ L L+ N + ++ F + L L ++ N L L F + + +LK
Sbjct: 435 HNLEYLYLEYNAVKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVSLTRINLK 490
Score = 42 (19.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
+ +G F LQ L L+GN+L + ++ L +L L N K
Sbjct: 402 LEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGLHNLEYLYLEYNAVK 448
Score = 37 (18.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 21/88 (23%), Positives = 42/88 (47%)
Query: 412 LNLSGNNLQDIHNLLYQSNIK---LTHLDLSRNKFKGFDEKSYI-MSEPKNIHKAAKNSF 467
L L+GN IH L+ ++ L L L N+ + +E S+I ++ + ++ +
Sbjct: 368 LVLAGNI---IHTLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLT 424
Query: 468 ALQSSM--G-KNAEYAVFIASSSISYLL 492
L M G N EY +++ +++ +L
Sbjct: 425 KLSRGMFLGLHNLEY-LYLEYNAVKEIL 451
>UNIPROTKB|F1NBN5 [details] [associations]
symbol:TLR7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0006955 "immune response"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007252 "I-kappaB phosphorylation" evidence=IEA]
[GO:0032009 "early phagosome" evidence=IEA] [GO:0032722 "positive
regulation of chemokine production" evidence=IEA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IEA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=IEA] [GO:0034154 "toll-like receptor 7 signaling pathway"
evidence=IEA] [GO:0035197 "siRNA binding" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045359 "positive regulation of interferon-beta biosynthetic
process" evidence=IEA] [GO:0045416 "positive regulation of
interleukin-8 biosynthetic process" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0071260 "cellular
response to mechanical stimulus" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR026880
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 GO:GO:0005783
GO:GO:0016021 GO:GO:0005886 GO:GO:0006955 GO:GO:0005768
GO:GO:0003727 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0032722 GO:GO:0032755 GO:GO:0005764
GO:GO:0051607 GO:GO:0032009 GO:GO:0003725 GO:GO:0032757
GO:GO:0071260 GO:GO:0035197 InterPro:IPR000372 SMART:SM00013
GO:GO:0045416 GO:GO:0042346 GO:GO:0045078 InterPro:IPR026906
Pfam:PF13306 GO:GO:0007252 SUPFAM:SSF52200 GO:GO:0034154
GO:GO:0045359 GeneTree:ENSGT00680000099674 GO:GO:0045356
PANTHER:PTHR24365:SF1 EMBL:AADN02064181 IPI:IPI00819665
Ensembl:ENSGALT00000036619 Uniprot:F1NBN5
Length = 1047
Score = 128 (50.1 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 49/172 (28%), Positives = 73/172 (42%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRL-------AKVTTTAFTNLTNLIELDISYNKLDR 347
N + SQ LQ L + NRL K + F NLTNL +LDIS N L+
Sbjct: 604 NEISTSISTGMESQ-SLQTLEFRGNRLDIFWSDGKKEYLSFFKNLTNLEQLDISSNMLNF 662
Query: 348 LEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNP 407
L F+ + L+ L ++ N + +++ T +P+ L
Sbjct: 663 LPPDVFEAMPPELKILNLTSNRLHTFNWGKLHLLTKLITLD-LSNNLLTTVPRKLSNCTS 721
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNI 459
LQ L L N + I + I+LT+LDLS NK + + S+ P+NI
Sbjct: 722 TLQELILRNNRITRITKYFLRGAIQLTYLDLSSNKIQIIKKSSF----PENI 769
Score = 123 (48.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 63/271 (23%), Positives = 110/271 (40%)
Query: 113 FQQFQHLEELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
FQ L+ L+++ N+ + F+ + L+YL+ ++N I L FK + L+ L
Sbjct: 511 FQDLSFLKCLNLSGNAISQTLNGSEFYYLSGLKYLDFSNNRIDLLYSTAFKELKFLEILD 570
Query: 172 LDFNKIESIPSSV-----FM-HLSDLRVLSLAHNRIS-KLAPRXXXXXXXXXXXXXXYND 224
L NK + V FM +L+ L+ L + N IS ++ D
Sbjct: 571 LSNNKHYFLAEGVSHVLSFMKNLAYLKKLMMNENEISTSISTGMESQSLQTLEFRGNRLD 630
Query: 225 IVEINPE-----IFKDIQELKTFKCRSCGLENINPMMYSILA-DLIYLDLGYNQXXXXXX 278
I + + FK++ L+ S L + P ++ + +L L+L N+
Sbjct: 631 IFWSDGKKEYLSFFKNLTNLEQLDISSNMLNFLPPDVFEAMPPELKILNLTSNRLHTFNW 690
Query: 279 XXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIEL 338
N + K + LQ L L+ NR+ ++T L L
Sbjct: 691 GKLHLLTKLITLDLSNNLLTTVPRKLSNCTSTLQELILRNNRITRITKYFLRGAIQLTYL 750
Query: 339 DISYNKLDRLEVASF-DPIENSLRDLKISGN 368
D+S NK+ ++ +SF + I N+LR L + N
Sbjct: 751 DLSSNKIQIIKKSSFPENIINNLRMLLLHNN 781
Score = 87 (35.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 139 GVPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSV--------FMHLS 189
G+P+ LR L+L NNI S+ F + N++ LYL N P +V F++L
Sbjct: 141 GLPATLRLLSLEANNIFSIKKNTFSELRNIELLYLGQNCYYRNPCNVSFEIEETAFLNLK 200
Query: 190 DLRVLSLAHNRISKLAP 206
+L VLSL N ++ + P
Sbjct: 201 NLTVLSLKSNNLTFIPP 217
Score = 78 (32.5 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 120 EELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN-FKGMMNLQELYLDF--NK 176
E L ++ + I + F + L+ LNL+ N I+ L+ + F + L+ YLDF N+
Sbjct: 494 ETLDLSRNNIFFVNSIDFQDLSFLKCLNLSGNAISQTLNGSEFYYLSGLK--YLDFSNNR 551
Query: 177 IESIPSSVFMHLSDLRVLSLAHNR 200
I+ + S+ F L L +L L++N+
Sbjct: 552 IDLLYSTAFKELKFLEILDLSNNK 575
Score = 75 (31.5 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKI-ESIPSSVFMHLSDLRVLSLAHNRISKL 204
L+L+ NNI + +F+ + L+ L L N I +++ S F +LS L+ L ++NRI L
Sbjct: 496 LDLSRNNIFFVNSIDFQDLSFLKCLNLSGNAISQTLNGSEFYYLSGLKYLDFSNNRIDLL 555
Score = 59 (25.8 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 37/144 (25%), Positives = 66/144 (45%)
Query: 8 MSKLKSLDLSYNDIV-EI-NPEIFKDIQ-----DTTMLFQVTIFLYLLHSSASVMCPYMC 60
+ LK+LDLS N ++ EI + E K I D + F++ ++ L+ S + C
Sbjct: 308 IKNLKNLDLSQNFLIKEIGDAEFLKLIPSLVELDLSFNFELQMYSPFLNLSKTFSCLSNL 367
Query: 61 ECALDDRGRYEIVCRRGDMANPI----PIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQF 116
E L +G Y R + +P+ + +DLGT +KI +F++F
Sbjct: 368 E-TLRIKG-YVFKELREENLDPLLNLRNLTVLDLGTNFIKIADLR----------VFKKF 415
Query: 117 QHLEELHIT-NSFIPAIGFHPFWG 139
+ L+ + ++ N P+ G F+G
Sbjct: 416 RSLKIIDLSMNKISPSSGEGNFYG 439
Score = 52 (23.4 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 27/115 (23%), Positives = 49/115 (42%)
Query: 89 DLG-TEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLN 147
++G E LK++PS L + F+ + L+++ +F + +
Sbjct: 324 EIGDAEFLKLIPSLVE---LDLSFNFELQMYSPFLNLSKTFSCLSNLETL-RIKGYVFKE 379
Query: 148 LTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
L N+ LL+ + NL L L N I+ VF L+++ L+ N+IS
Sbjct: 380 LREENLDPLLN-----LRNLTVLDLGTNFIKIADLRVFKKFRSLKIIDLSMNKIS 429
Score = 50 (22.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 33/146 (22%), Positives = 61/146 (41%)
Query: 139 GVP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE--------------SIPSS 183
G+P + L LT N+I + +F + NL E+ N + SI +
Sbjct: 58 GIPGNATNLTLTINHIPRISPASFTQLENLVEIDFRCNCVPPRLGPKDNVCVTPPSIENG 117
Query: 184 VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT-F 242
F L+ L+ L L N++SK+ PR N+I I F +++ ++ +
Sbjct: 118 SFAALTRLKSLYLDANQLSKI-PRGLPATLRLLSLEA--NNIFSIKKNTFSELRNIELLY 174
Query: 243 KCRSCGLENINPMMYSILADLIYLDL 268
++C N + + I + +L+L
Sbjct: 175 LGQNCYYRNPCNVSFEI-EETAFLNL 199
Score = 45 (20.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDI 32
MS ++LDLS N+I +N F+D+
Sbjct: 490 MSYGETLDLSRNNIFFVNSIDFQDL 514
Score = 41 (19.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTMLF 39
L+ L L N+I I F ++++ +L+
Sbjct: 146 LRLLSLEANNIFSIKKNTFSELRNIELLY 174
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 167 (63.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 70/286 (24%), Positives = 112/286 (39%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQ 115
CP C C +D C ++ +P +D T L + S N L G +F
Sbjct: 35 CPAPCHCQ-EDGIMLSADCSELGLSE-VP-ADLDPLTAYLDL--SMNNLTELQPG-LFHH 88
Query: 116 FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN 175
+ LEEL ++ + + I F G+ SL+ L L N + + + +LQ L LD N
Sbjct: 89 LRFLEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDAN 148
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKD 235
I +P F LS LR L L N ++++ R N I I F++
Sbjct: 149 LISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRIRHIPDYAFQN 208
Query: 236 IQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGN 295
+ L + ++++ + L +L LDL YN+ N
Sbjct: 209 LTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPVAIRTLGRLQELGFH-NN 267
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
+ I EK+F LQ + N + V +AF L+ L L ++
Sbjct: 268 NIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLN 313
Score = 156 (60.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 66/257 (25%), Positives = 100/257 (38%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
FQ L LH+ N+ I +G H F G+ +L L+L +N + + + LQEL
Sbjct: 206 FQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEF-PVAIRTLGRLQELGF 264
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX-YNDIVEINPE 231
N I++IP FM L+ + N I + DI E P+
Sbjct: 265 HNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLNGATDIQEF-PD 323
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
+ K L+ G+ + M L L L+L +NQ
Sbjct: 324 L-KGTTSLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQIEELPSLHRCQKLEEIGLQ 382
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA 351
N I +FS LQ L L N + + AF+ L +L++LD++ N+L L +A
Sbjct: 383 H--NRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLPLA 440
Query: 352 SFDPIENSLRDLKISGN 368
L LK+ GN
Sbjct: 441 GL----GGLMHLKLKGN 453
Score = 116 (45.9 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 48/203 (23%), Positives = 78/203 (38%)
Query: 171 YLDF--NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI 228
YLD N + + +F HL L L L+ N +S + + N + I
Sbjct: 70 YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGI 129
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXX 288
E ++ L++ + + + + + L+ L +L L N
Sbjct: 130 PAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQ 189
Query: 289 XXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
N I + +F + L VL L NR+ V T +F L NL LD++YN+L
Sbjct: 190 AMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEF 249
Query: 349 EVASFDPIENSLRDLKISGNNIQ 371
VA L++L NNI+
Sbjct: 250 PVAI--RTLGRLQELGFHNNNIK 270
Score = 52 (23.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+I F LQ L+LS N ++ IH + + L LDL+ N+
Sbjct: 388 EIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQ 433
Score = 47 (21.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 14 LDLSYNDIVEINPEIFKDIQ 33
LDLS N++ E+ P +F ++
Sbjct: 71 LDLSMNNLTELQPGLFHHLR 90
>UNIPROTKB|C4PCM1 [details] [associations]
symbol:TLR7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0006955 "immune response"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007252 "I-kappaB phosphorylation" evidence=IEA]
[GO:0032009 "early phagosome" evidence=IEA] [GO:0032722 "positive
regulation of chemokine production" evidence=IEA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IEA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=IEA] [GO:0034154 "toll-like receptor 7 signaling pathway"
evidence=IEA] [GO:0035197 "siRNA binding" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045359 "positive regulation of interferon-beta biosynthetic
process" evidence=IEA] [GO:0045416 "positive regulation of
interleukin-8 biosynthetic process" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0071260 "cellular
response to mechanical stimulus" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR026880
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 GO:GO:0005783
GO:GO:0016021 GO:GO:0005886 GO:GO:0006955 GO:GO:0005768
GO:GO:0003727 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0032722 GO:GO:0032755 GO:GO:0005764
GO:GO:0051607 GO:GO:0032009 GO:GO:0003725 GO:GO:0032757
GO:GO:0071260 GO:GO:0035197 InterPro:IPR000372 SMART:SM00013
GO:GO:0045416 GO:GO:0042346 GO:GO:0045078 InterPro:IPR026906
Pfam:PF13306 GO:GO:0007252 SUPFAM:SSF52200 GO:GO:0034154
GO:GO:0045359 GeneTree:ENSGT00680000099674 GO:GO:0045356
HOGENOM:HOG000230468 OMA:AFYLSHQ PANTHER:PTHR24365:SF1
EMBL:AADN02064181 EMBL:FJ915557 EMBL:FJ915558 EMBL:FJ915559
EMBL:FJ915560 EMBL:FJ915561 EMBL:FJ915562 EMBL:FJ915563
EMBL:FJ915564 EMBL:FJ915565 EMBL:FJ915566 EMBL:FJ915567
EMBL:FJ915568 EMBL:FJ915569 EMBL:FJ915570 EMBL:FJ915571
EMBL:FJ915572 EMBL:FJ915573 EMBL:FJ915574 EMBL:FJ915581
EMBL:FJ915582 EMBL:FJ915583 EMBL:FJ915584 EMBL:FJ915585
EMBL:FJ915586 EMBL:FJ915587 EMBL:FJ915588 EMBL:FJ915589
EMBL:FJ915590 EMBL:FJ915591 EMBL:FJ915592 EMBL:FJ915593
EMBL:FJ915594 EMBL:FJ915595 EMBL:FJ915596 EMBL:FJ915597
EMBL:FJ915598 EMBL:FJ915599 EMBL:FJ915600 IPI:IPI00576027
STRING:C4PCM1 Ensembl:ENSGALT00000026777 Uniprot:C4PCM1
Length = 1059
Score = 128 (50.1 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 49/172 (28%), Positives = 73/172 (42%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRL-------AKVTTTAFTNLTNLIELDISYNKLDR 347
N + SQ LQ L + NRL K + F NLTNL +LDIS N L+
Sbjct: 616 NEISTSISTGMESQ-SLQTLEFRGNRLDIFWSDGKKEYLSFFKNLTNLEQLDISSNMLNF 674
Query: 348 LEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNP 407
L F+ + L+ L ++ N + +++ T +P+ L
Sbjct: 675 LPPDVFEAMPPELKILNLTSNRLHTFNWGKLHLLTKLITLD-LSNNLLTTVPRKLSNCTS 733
Query: 408 HLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNI 459
LQ L L N + I + I+LT+LDLS NK + + S+ P+NI
Sbjct: 734 TLQELILRNNRITRITKYFLRGAIQLTYLDLSSNKIQIIKKSSF----PENI 781
Score = 123 (48.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 63/271 (23%), Positives = 110/271 (40%)
Query: 113 FQQFQHLEELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
FQ L+ L+++ N+ + F+ + L+YL+ ++N I L FK + L+ L
Sbjct: 523 FQDLSFLKCLNLSGNAISQTLNGSEFYYLSGLKYLDFSNNRIDLLYSTAFKELKFLEILD 582
Query: 172 LDFNKIESIPSSV-----FM-HLSDLRVLSLAHNRIS-KLAPRXXXXXXXXXXXXXXYND 224
L NK + V FM +L+ L+ L + N IS ++ D
Sbjct: 583 LSNNKHYFLAEGVSHVLSFMKNLAYLKKLMMNENEISTSISTGMESQSLQTLEFRGNRLD 642
Query: 225 IVEINPE-----IFKDIQELKTFKCRSCGLENINPMMYSILA-DLIYLDLGYNQXXXXXX 278
I + + FK++ L+ S L + P ++ + +L L+L N+
Sbjct: 643 IFWSDGKKEYLSFFKNLTNLEQLDISSNMLNFLPPDVFEAMPPELKILNLTSNRLHTFNW 702
Query: 279 XXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIEL 338
N + K + LQ L L+ NR+ ++T L L
Sbjct: 703 GKLHLLTKLITLDLSNNLLTTVPRKLSNCTSTLQELILRNNRITRITKYFLRGAIQLTYL 762
Query: 339 DISYNKLDRLEVASF-DPIENSLRDLKISGN 368
D+S NK+ ++ +SF + I N+LR L + N
Sbjct: 763 DLSSNKIQIIKKSSFPENIINNLRMLLLHNN 793
Score = 87 (35.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 139 GVPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSV--------FMHLS 189
G+P+ LR L+L NNI S+ F + N++ LYL N P +V F++L
Sbjct: 153 GLPATLRLLSLEANNIFSIKKNTFSELRNIELLYLGQNCYYRNPCNVSFEIEETAFLNLK 212
Query: 190 DLRVLSLAHNRISKLAP 206
+L VLSL N ++ + P
Sbjct: 213 NLTVLSLKSNNLTFIPP 229
Score = 78 (32.5 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 120 EELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN-FKGMMNLQELYLDF--NK 176
E L ++ + I + F + L+ LNL+ N I+ L+ + F + L+ YLDF N+
Sbjct: 506 ETLDLSRNNIFFVNSIDFQDLSFLKCLNLSGNAISQTLNGSEFYYLSGLK--YLDFSNNR 563
Query: 177 IESIPSSVFMHLSDLRVLSLAHNR 200
I+ + S+ F L L +L L++N+
Sbjct: 564 IDLLYSTAFKELKFLEILDLSNNK 587
Score = 75 (31.5 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKI-ESIPSSVFMHLSDLRVLSLAHNRISKL 204
L+L+ NNI + +F+ + L+ L L N I +++ S F +LS L+ L ++NRI L
Sbjct: 508 LDLSRNNIFFVNSIDFQDLSFLKCLNLSGNAISQTLNGSEFYYLSGLKYLDFSNNRIDLL 567
Score = 59 (25.8 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 37/144 (25%), Positives = 66/144 (45%)
Query: 8 MSKLKSLDLSYNDIV-EI-NPEIFKDIQ-----DTTMLFQVTIFLYLLHSSASVMCPYMC 60
+ LK+LDLS N ++ EI + E K I D + F++ ++ L+ S + C
Sbjct: 320 IKNLKNLDLSQNFLIKEIGDAEFLKLIPSLVELDLSFNFELQMYSPFLNLSKTFSCLSNL 379
Query: 61 ECALDDRGRYEIVCRRGDMANPI----PIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQF 116
E L +G Y R + +P+ + +DLGT +KI +F++F
Sbjct: 380 E-TLRIKG-YVFKELREENLDPLLNLRNLTVLDLGTNFIKIADLR----------VFKKF 427
Query: 117 QHLEELHIT-NSFIPAIGFHPFWG 139
+ L+ + ++ N P+ G F+G
Sbjct: 428 RSLKIIDLSMNKISPSSGEGNFYG 451
Score = 52 (23.4 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 27/115 (23%), Positives = 49/115 (42%)
Query: 89 DLG-TEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLN 147
++G E LK++PS L + F+ + L+++ +F + +
Sbjct: 336 EIGDAEFLKLIPSLVE---LDLSFNFELQMYSPFLNLSKTFSCLSNLETL-RIKGYVFKE 391
Query: 148 LTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
L N+ LL+ + NL L L N I+ VF L+++ L+ N+IS
Sbjct: 392 LREENLDPLLN-----LRNLTVLDLGTNFIKIADLRVFKKFRSLKIIDLSMNKIS 441
Score = 50 (22.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 33/146 (22%), Positives = 61/146 (41%)
Query: 139 GVP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE--------------SIPSS 183
G+P + L LT N+I + +F + NL E+ N + SI +
Sbjct: 70 GIPGNATNLTLTINHIPRISPASFTQLENLVEIDFRCNCVPPRLGPKDNVCVTPPSIENG 129
Query: 184 VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT-F 242
F L+ L+ L L N++SK+ PR N+I I F +++ ++ +
Sbjct: 130 SFAALTRLKSLYLDANQLSKI-PRGLPATLRLLSLEA--NNIFSIKKNTFSELRNIELLY 186
Query: 243 KCRSCGLENINPMMYSILADLIYLDL 268
++C N + + I + +L+L
Sbjct: 187 LGQNCYYRNPCNVSFEI-EETAFLNL 211
Score = 45 (20.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDI 32
MS ++LDLS N+I +N F+D+
Sbjct: 502 MSYGETLDLSRNNIFFVNSIDFQDL 526
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTMLF 39
L+ L L N+I I F ++++ +L+
Sbjct: 158 LRLLSLEANNIFSIKKNTFSELRNIELLY 186
>UNIPROTKB|Q6WCD5 [details] [associations]
symbol:TLR4 "Toll-like receptor" species:9913 "Bos taurus"
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0071223 "cellular response to lipoteichoic acid"
evidence=IEA] [GO:0070434 "positive regulation of
nucleotide-binding oligomerization domain containing 2 signaling
pathway" evidence=IEA] [GO:0070430 "positive regulation of
nucleotide-binding oligomerization domain containing 1 signaling
pathway" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0070373 "negative regulation of
ERK1 and ERK2 cascade" evidence=IEA] [GO:0060907 "positive
regulation of macrophage cytokine production" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0050829 "defense response to Gram-negative
bacterium" evidence=IEA] [GO:0050727 "regulation of inflammatory
response" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0046696 "lipopolysaccharide receptor
complex" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045429 "positive regulation of nitric oxide biosynthetic
process" evidence=IEA] [GO:0045416 "positive regulation of
interleukin-8 biosynthetic process" evidence=IEA] [GO:0045359
"positive regulation of interferon-beta biosynthetic process"
evidence=IEA] [GO:0045348 "positive regulation of MHC class II
biosynthetic process" evidence=IEA] [GO:0045084 "positive
regulation of interleukin-12 biosynthetic process" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042535 "positive regulation of tumor
necrosis factor biosynthetic process" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0042116 "macrophage activation" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032733 "positive regulation of interleukin-10 production"
evidence=IEA] [GO:0032732 "positive regulation of interleukin-1
production" evidence=IEA] [GO:0032729 "positive regulation of
interferon-gamma production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032727
"positive regulation of interferon-alpha production" evidence=IEA]
[GO:0032722 "positive regulation of chemokine production"
evidence=IEA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IEA] [GO:0032715 "negative regulation
of interleukin-6 production" evidence=IEA] [GO:0032707 "negative
regulation of interleukin-23 production" evidence=IEA] [GO:0032700
"negative regulation of interleukin-17 production" evidence=IEA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IEA] [GO:0032609 "interferon-gamma production"
evidence=IEA] [GO:0032497 "detection of lipopolysaccharide"
evidence=IEA] [GO:0030890 "positive regulation of B cell
proliferation" evidence=IEA] [GO:0010572 "positive regulation of
platelet activation" evidence=IEA] [GO:0009897 "external side of
plasma membrane" evidence=IEA] [GO:0007252 "I-kappaB
phosphorylation" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0002537 "nitric oxide production
involved in inflammatory response" evidence=IEA] [GO:0001875
"lipopolysaccharide receptor activity" evidence=IEA] [GO:0000187
"activation of MAPK activity" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0050707 "regulation of cytokine
secretion" evidence=IEA] [GO:0034142 "toll-like receptor 4
signaling pathway" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0048471 GO:GO:0005887 GO:GO:0009897 GO:GO:0032689
GO:GO:0050829 GO:GO:0043123 GO:GO:0070374 GO:GO:0046330
GO:GO:0045944 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045087 GO:GO:0032722 GO:GO:0032755
GO:GO:0000187 GO:GO:0050727 GO:GO:0032720 GO:GO:0032715
GO:GO:0030890 GO:GO:0051092 GO:GO:0070373 GO:GO:0032757
GO:GO:0071260 GO:GO:0045429 GO:GO:0042116 GO:GO:0004888
GO:GO:0045416 GO:GO:0032729 GO:GO:0032760 GO:GO:0046696
GO:GO:0042535 GO:GO:0045348 GO:GO:0032735 GO:GO:0042346
GO:GO:0051770 GO:GO:0071223 GeneTree:ENSGT00700000104185
GO:GO:0032733 GO:GO:0060907 GO:GO:0032727 GO:GO:0002537
GO:GO:0032728 GO:GO:0007252 GO:GO:0032609 SUPFAM:SSF52200
GO:GO:0032700 GO:GO:0045084 GO:GO:0001875 GO:GO:0032497
GO:GO:0010572 GO:GO:0032707 GO:GO:0060729 GO:GO:0045359
HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9 IPI:IPI00713344
UniGene:Bt.9030 GO:GO:0032732 GO:GO:0070430 GO:GO:0070434
EMBL:DAAA02024656 EMBL:AY297040 EMBL:DQ839567 SMR:Q6WCD5
STRING:Q6WCD5 Ensembl:ENSBTAT00000008190 InParanoid:Q6WCD5
OMA:NDVITMG Uniprot:Q6WCD5
Length = 841
Score = 139 (54.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 52/201 (25%), Positives = 85/201 (42%)
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRIS-K-LAPRXXXXXXXXXXXXXXYNDIVEINPE 231
F + I + L L+ L L N +S K +ND++ +
Sbjct: 358 FTDNKDISTFTEFQLPSLQYLDLKRNHLSFKGCCSHTDFGTTNLKHLDLSFNDVITLGSN 417
Query: 232 IFKDIQELKTFKCRSCGLENINPMM-YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
F +++L+ + L+ IN + L +L YLD+ Y
Sbjct: 418 -FMGLEQLEHLDFQHSTLKQINAFSAFLSLRNLRYLDISYTNIRIVFHGIFTGLVSLQTL 476
Query: 291 XXXGNHFPV-ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
GN F +L F+ L VL L + +L +V TAF +L++L L++S+NKL L+
Sbjct: 477 KMAGNSFQNNLLPDIFTELTNLTVLDLSKCQLEQVAQTAFHSLSSLQVLNMSHNKLLSLD 536
Query: 350 VASFDPIENSLRDLKISGNNI 370
++P+ +SLR L S N I
Sbjct: 537 TFLYEPL-HSLRILDCSFNRI 556
Score = 120 (47.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 43/173 (24%), Positives = 76/173 (43%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+ L +F +L+ L + + L ++ +AF +L NL LDISY + + F +
Sbjct: 412 ITLGSNFMGLEQLEHLDFQHSTLKQINAFSAFLSLRNLRYLDISYTNIRIVFHGIFTGLV 471
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
SL+ LK++GN+ Q ++ + + F LQ LN+S N
Sbjct: 472 -SLQTLKMAGNSFQNNLLPDIFTELTNLTVLDLSKCQLEQVAQTAFHSLSSLQVLNMSHN 530
Query: 418 NLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIH--KAAKNSFA 468
L + LY+ L LD S N+ E+ + + P+++ +N+FA
Sbjct: 531 KLLSLDTFLYEPLHSLRILDCSFNRIMASKEQE-LQNLPRSLTWLNLTQNAFA 582
Score = 100 (40.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 39/145 (26%), Positives = 61/145 (42%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F F L+ L ++ I I F G+ L L LT N I SL F G+ +LQ+L
Sbjct: 74 FSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLILTGNPIQSLAWGAFSGLSSLQKLVA 133
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA-PRXXXXXXXXXXXXXXYNDIVEINPE 231
+ S+ HL +L+ L++AHN I P N I I
Sbjct: 134 VETNLVSLNDFPIGHLKNLKELNVAHNFIHSFKLPEYFSNLPNLEHLDLSNNKIQNI--- 190
Query: 232 IFKDIQELKTFKCRSCGLE-NINPM 255
++D++ L + L+ ++NP+
Sbjct: 191 YYEDVKVLHQMPLLNLSLDLSLNPL 215
Score = 99 (39.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 35/148 (23%), Positives = 62/148 (41%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L ++ +++ +G H F P L+ L+L+ I + D F+G+ +L L L N I+S+
Sbjct: 59 LDLSFNYLRHLGSHNFSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLILTGNPIQSLA 118
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN-PEIFKDIQELK 240
F LS L+ L + L +N I PE F ++ L+
Sbjct: 119 WGAFSGLSSLQKLVAVETNLVSLNDFPIGHLKNLKELNVAHNFIHSFKLPEYFSNLPNLE 178
Query: 241 TFKCRSCGLENINPMMYSILADLIYLDL 268
+ ++NI +L + L+L
Sbjct: 179 HLDLSNNKIQNIYYEDVKVLHQMPLLNL 206
Score = 92 (37.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 35/135 (25%), Positives = 55/135 (40%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P S + L+L+ N + L +NF LQ L L +I+ I F L+ L L L
Sbjct: 52 IPISTKMLDLSFNYLRHLGSHNFSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLILTG 111
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENIN-PMMY 257
N I LA ++V +N ++ LK + + P +
Sbjct: 112 NPIQSLAWGAFSGLSSLQKLVAVETNLVSLNDFPIGHLKNLKELNVAHNFIHSFKLPEYF 171
Query: 258 SILADLIYLDLGYNQ 272
S L +L +LDL N+
Sbjct: 172 SNLPNLEHLDLSNNK 186
Score = 80 (33.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 48/185 (25%), Positives = 81/185 (43%)
Query: 15 DLSYNDIVEINP-EIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIV 73
++SY +E+N +I +I +T + ++ F YL H + + E + D R EI
Sbjct: 35 NISYQ-CMELNLYKIPDNIPISTKMLDLS-FNYLRHLGSHNFSSFP-ELQVLDLSRCEIK 91
Query: 74 CRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIG 133
D G L T +L P + L G F L++L + + ++
Sbjct: 92 IIEDDTFQ----GLNHLSTLILTGNPIQS----LAWGA-FSGLSSLQKLVAVETNLVSLN 142
Query: 134 FHPFWGVPSLRYLNLTHNNITSL-LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLR 192
P + +L+ LN+ HN I S L F + NL+ L L NKI++I L +
Sbjct: 143 DFPIGHLKNLKELNVAHNFIHSFKLPEYFSNLPNLEHLDLSNNKIQNIYYEDVKVLHQMP 202
Query: 193 VLSLA 197
+L+L+
Sbjct: 203 LLNLS 207
Score = 48 (22.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 13 SLDLSYNDIVEINPEIFKDIQ 33
SLDLS N + I P FK+I+
Sbjct: 207 SLDLSLNPLDFIEPGTFKEIK 227
>UNIPROTKB|Q9GL65 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9913 "Bos
taurus" [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0042116 "macrophage activation" evidence=ISS]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0050829 "defense response
to Gram-negative bacterium" evidence=IEA] [GO:0050707 "regulation
of cytokine secretion" evidence=IEA] [GO:0034142 "toll-like
receptor 4 signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045087 GO:GO:0005622 GO:GO:0042116
GO:GO:0004888 GO:GO:0046696 SUPFAM:SSF52200 GO:GO:0001875
GO:GO:0032497 HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9
EMBL:AF310952 EMBL:AY634630 EMBL:DQ839566 IPI:IPI00713344
RefSeq:NP_776623.5 UniGene:Bt.9030 ProteinModelPortal:Q9GL65
SMR:Q9GL65 STRING:Q9GL65 GeneID:281536 KEGG:bta:281536 CTD:7099
eggNOG:NOG249751 HOGENOM:HOG000037951 InParanoid:Q9GL65 KO:K10160
OrthoDB:EOG4P8FHQ NextBio:20805491 Uniprot:Q9GL65
Length = 841
Score = 139 (54.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 52/201 (25%), Positives = 85/201 (42%)
Query: 174 FNKIESIPSSVFMHLSDLRVLSLAHNRIS-K-LAPRXXXXXXXXXXXXXXYNDIVEINPE 231
F + I + L L+ L L N +S K +ND++ +
Sbjct: 358 FTDNKDISTFTEFQLPSLQYLDLKRNHLSFKGCCSHTDFGTTNLKHLDLSFNDVITLGSN 417
Query: 232 IFKDIQELKTFKCRSCGLENINPMM-YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
F +++L+ + L+ IN + L +L YLD+ Y
Sbjct: 418 -FMGLEQLEHLDFQHSTLKQINAFSAFLSLRNLRYLDISYTNIRIVFHGIFTGLVSLQTL 476
Query: 291 XXXGNHFPV-ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
GN F +L F+ L VL L + +L +V TAF +L++L L++S+NKL L+
Sbjct: 477 KMAGNSFQNNLLPDIFTELTNLTVLDLSKCQLEQVAQTAFHSLSSLQVLNMSHNKLLSLD 536
Query: 350 VASFDPIENSLRDLKISGNNI 370
++P+ +SLR L S N I
Sbjct: 537 TFLYEPL-HSLRILDCSFNRI 556
Score = 120 (47.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 43/173 (24%), Positives = 76/173 (43%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+ L +F +L+ L + + L ++ +AF +L NL LDISY + + F +
Sbjct: 412 ITLGSNFMGLEQLEHLDFQHSTLKQINAFSAFLSLRNLRYLDISYTNIRIVFHGIFTGLV 471
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
SL+ LK++GN+ Q ++ + + F LQ LN+S N
Sbjct: 472 -SLQTLKMAGNSFQNNLLPDIFTELTNLTVLDLSKCQLEQVAQTAFHSLSSLQVLNMSHN 530
Query: 418 NLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIH--KAAKNSFA 468
L + LY+ L LD S N+ E+ + + P+++ +N+FA
Sbjct: 531 KLLSLDTFLYEPLHSLRILDCSFNRIMASKEQE-LQNLPRSLTWLNLTQNAFA 582
Score = 100 (40.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 39/145 (26%), Positives = 61/145 (42%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F F L+ L ++ I I F G+ L L LT N I SL F G+ +LQ+L
Sbjct: 74 FSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLILTGNPIQSLAWGAFSGLSSLQKLVA 133
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA-PRXXXXXXXXXXXXXXYNDIVEINPE 231
+ S+ HL +L+ L++AHN I P N I I
Sbjct: 134 VETNLVSLNDFPIGHLKNLKELNVAHNFIHSFKLPEYFSNLPNLEHLDLSNNKIQNI--- 190
Query: 232 IFKDIQELKTFKCRSCGLE-NINPM 255
++D++ L + L+ ++NP+
Sbjct: 191 YYEDVKVLHQMPLLNLSLDLSLNPL 215
Score = 99 (39.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 35/148 (23%), Positives = 62/148 (41%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L ++ +++ +G H F P L+ L+L+ I + D F+G+ +L L L N I+S+
Sbjct: 59 LDLSFNYLRHLGSHNFSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLILTGNPIQSLA 118
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN-PEIFKDIQELK 240
F LS L+ L + L +N I PE F ++ L+
Sbjct: 119 WGAFSGLSSLQKLVAVETNLVSLNDFPIGHLKNLKELNVAHNFIHSFKLPEYFSNLPNLE 178
Query: 241 TFKCRSCGLENINPMMYSILADLIYLDL 268
+ ++NI +L + L+L
Sbjct: 179 HLDLSNNKIQNIYYEDVKVLHQMPLLNL 206
Score = 92 (37.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 35/135 (25%), Positives = 55/135 (40%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P S + L+L+ N + L +NF LQ L L +I+ I F L+ L L L
Sbjct: 52 IPISTKMLDLSFNYLRHLGSHNFSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLILTG 111
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENIN-PMMY 257
N I LA ++V +N ++ LK + + P +
Sbjct: 112 NPIQSLAWGAFSGLSSLQKLVAVETNLVSLNDFPIGHLKNLKELNVAHNFIHSFKLPEYF 171
Query: 258 SILADLIYLDLGYNQ 272
S L +L +LDL N+
Sbjct: 172 SNLPNLEHLDLSNNK 186
Score = 80 (33.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 48/185 (25%), Positives = 81/185 (43%)
Query: 15 DLSYNDIVEINP-EIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIV 73
++SY +E+N +I +I +T + ++ F YL H + + E + D R EI
Sbjct: 35 NISYQ-CMELNLYKIPDNIPISTKMLDLS-FNYLRHLGSHNFSSFP-ELQVLDLSRCEIK 91
Query: 74 CRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIG 133
D G L T +L P + L G F L++L + + ++
Sbjct: 92 IIEDDTFQ----GLNHLSTLILTGNPIQS----LAWGA-FSGLSSLQKLVAVETNLVSLN 142
Query: 134 FHPFWGVPSLRYLNLTHNNITSL-LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLR 192
P + +L+ LN+ HN I S L F + NL+ L L NKI++I L +
Sbjct: 143 DFPIGHLKNLKELNVAHNFIHSFKLPEYFSNLPNLEHLDLSNNKIQNIYYEDVKVLHQMP 202
Query: 193 VLSLA 197
+L+L+
Sbjct: 203 LLNLS 207
Score = 48 (22.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 13 SLDLSYNDIVEINPEIFKDIQ 33
SLDLS N + I P FK+I+
Sbjct: 207 SLDLSLNPLDFIEPGTFKEIK 227
>MGI|MGI:1932389 [details] [associations]
symbol:Tlr9 "toll-like receptor 9" species:10090 "Mus
musculus" [GO:0002224 "toll-like receptor signaling pathway"
evidence=ISO] [GO:0002237 "response to molecule of bacterial
origin" evidence=TAS] [GO:0002282 "microglial cell activation
involved in immune response" evidence=ISO] [GO:0005149
"interleukin-1 receptor binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005764 "lysosome" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;ISS;IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0006955 "immune response"
evidence=IMP] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=ISO] [GO:0009615
"response to virus" evidence=IMP] [GO:0010508 "positive regulation
of autophagy" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016323
"basolateral plasma membrane" evidence=ISO] [GO:0016324 "apical
plasma membrane" evidence=ISO] [GO:0030277 "maintenance of
gastrointestinal epithelium" evidence=IMP] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0032009 "early phagosome" evidence=IDA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=ISO] [GO:0032715 "negative regulation of
interleukin-6 production" evidence=IMP] [GO:0032717 "negative
regulation of interleukin-8 production" evidence=ISO] [GO:0032722
"positive regulation of chemokine production" evidence=ISO]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IDA] [GO:0032733 "positive regulation of interleukin-10
production" evidence=IDA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IDA] [GO:0032741 "positive
regulation of interleukin-18 production" evidence=IDA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=ISO;IDA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=ISO] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IDA] [GO:0034122 "negative regulation
of toll-like receptor signaling pathway" evidence=ISO] [GO:0034123
"positive regulation of toll-like receptor signaling pathway"
evidence=ISO] [GO:0035197 "siRNA binding" evidence=ISO] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042742 "defense response to bacterium"
evidence=ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO] [GO:0043507 "positive
regulation of JUN kinase activity" evidence=ISO] [GO:0045078
"positive regulation of interferon-gamma biosynthetic process"
evidence=ISO] [GO:0045087 "innate immune response" evidence=TAS]
[GO:0045322 "unmethylated CpG binding" evidence=ISO] [GO:0045356
"positive regulation of interferon-alpha biosynthetic process"
evidence=ISO] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP] [GO:0050727 "regulation of inflammatory response"
evidence=IMP] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0051607 "defense
response to virus" evidence=ISO;IGI] [GO:0051770 "positive
regulation of nitric-oxide synthase biosynthetic process"
evidence=IDA] [GO:0052033 "pathogen-associated molecular pattern
dependent induction by symbiont of host innate immune response"
evidence=ISO] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027181 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
MGI:MGI:1932389 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0007165 GO:GO:0005789 GO:GO:0005768 GO:GO:0006954
GO:GO:0045944 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0032755 GO:GO:0030277 GO:GO:0005764
GO:GO:0051607 GO:GO:0050727 GO:GO:0032715 GO:GO:0032009
GO:GO:0002237 GO:GO:0035197 GO:GO:0032760 GO:GO:0032735
GO:GO:0051770 GO:GO:0045078 GO:GO:0032733 GO:GO:0032728
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0032741 GO:GO:0045356 HOGENOM:HOG000230468 HOVERGEN:HBG018601
OrthoDB:EOG47SSDD PANTHER:PTHR24373:SF37 OMA:VGGNCRR CTD:54106
KO:K10161 EMBL:AB045181 EMBL:AF348140 EMBL:AF314224 EMBL:AC164430
EMBL:AY649790 EMBL:AY649791 IPI:IPI00318748 IPI:IPI01027735
RefSeq:NP_112455.2 UniGene:Mm.44889 ProteinModelPortal:Q9EQU3
SMR:Q9EQU3 STRING:Q9EQU3 PhosphoSite:Q9EQU3 PRIDE:Q9EQU3
Ensembl:ENSMUST00000062241 GeneID:81897 KEGG:mmu:81897
InParanoid:Q4L0K3 ChEMBL:CHEMBL6128 NextBio:350461 Bgee:Q9EQU3
CleanEx:MM_TLR9 Genevestigator:Q9EQU3 GermOnline:ENSMUSG00000045322
Uniprot:Q9EQU3
Length = 1032
Score = 113 (44.8 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 47/156 (30%), Positives = 74/156 (47%)
Query: 106 HLTIGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN-FKG 163
H+TI P F + LEEL+++ + I + P SL L+L+H NI +LD N G
Sbjct: 111 HMTIEPRTFLAMRTLEELNLSYNGITTVPRLP----SSLVNLSLSHTNIL-VLDANSLAG 165
Query: 164 MMNLQELYLDFNKIESIPSS--------VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXX 215
+ +L+ L++D N P + + LS+L LSL +N ++K+ PR
Sbjct: 166 LYSLRVLFMDGNCYYKNPCTGAVKVTPGALLGLSNLTHLSLKYNNLTKV-PRQLPPSLEY 224
Query: 216 XXXXXXYNDIVEINPEIFKDIQELKTF----KCRSC 247
YN IV++ PE ++ L+ CR C
Sbjct: 225 LLVS--YNLIVKLGPEDLANLTSLRVLDVGGNCRRC 258
Score = 109 (43.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 60/214 (28%), Positives = 95/214 (44%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAK-VTTTAFTNLTNLIELDISYNKLDRLEVASF 353
N+ I + F + +LQ L L N +A+ V + F LTNL LD+S+NKLD SF
Sbjct: 483 NNLVTIKPEMFVNLSRLQCLSLSHNSIAQAVNGSQFLPLTNLQVLDLSHNKLDLYHWKSF 542
Query: 354 DPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMN--YTDIPKGLFK-MNPH-L 409
+ L+ L +S N+ + ++ + DI + +N + +
Sbjct: 543 SELPQ-LQALDLSYNSQPFSMKGIGHNFSFVTHLSMLQSLSLAHNDIHTRVSSHLNSNSV 601
Query: 410 QFLNLSGNNLQ---DIHNL---LYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIHKAA 463
+FL+ SGN + D L +Q L LDLS+N +I+ P+N+
Sbjct: 602 RFLDFSGNGMGRMWDEGGLYLHFFQGLSGLLKLDLSQNNL-------HIL-RPQNLDNLP 653
Query: 464 KNSFALQSSMGKNAEYAVFIASSSISYL--LEAL 495
K+ L S+ N Y F +S+S+L LE L
Sbjct: 654 KSLKLL--SLRDN--YLSFFNWTSLSFLPNLEVL 683
Score = 88 (36.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 52/233 (22%), Positives = 88/233 (37%)
Query: 223 NDIVEINPEIFKDIQELKTFKCRSCGL-ENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
N++V I PE+F ++ L+ + + +N + L +L LDL +N+
Sbjct: 483 NNLVTIKPEMFVNLSRLQCLSLSHNSIAQAVNGSQFLPLTNLQVLDLSHNKLDLYHWKSF 542
Query: 282 XXXXXXXXXXXXGNHFPVILEK-----SFSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNL 335
N P ++ SF + LQ L L N + ++ N ++
Sbjct: 543 SELPQLQALDLSYNSQPFSMKGIGHNFSFVTHLSMLQSLSLAHNDI-HTRVSSHLNSNSV 601
Query: 336 IELDISYNKLDR------LEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXX 389
LD S N + R L + F + L+ L +S NN+
Sbjct: 602 RFLDFSGNGMGRMWDEGGLYLHFFQGLSGLLK-LDLSQNNLHILRPQNLDNLPKSLKLLS 660
Query: 390 IADMNYTDIPKGL-FKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ D NY P+L+ L+L+GN L+ + N + L LD+S N
Sbjct: 661 LRD-NYLSFFNWTSLSFLPNLEVLDLAGNQLKALTNGTLPNGTLLQKLDVSSN 712
Score = 83 (34.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 70 YEIVCRRG--DMANPIPIGQMDLGTEVLKI--VPS---EENPNHLTIGP-IFQQFQHLEE 121
Y ++ + G D+AN + +D+G + P+ E L + P F HLE
Sbjct: 229 YNLIVKLGPEDLANLTSLRVLDVGGNCRRCDHAPNPCIECGQKSLHLHPETFHHLSHLEG 288
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNI-TSLLDYN-FKGMMNLQELYLDFNKIES 179
L + +S + + F G+ +L L+L+ N + S+ N F+ + L++L L FN +
Sbjct: 289 LVLKDSSLHTLNSSWFQGLVNLSVLDLSENFLYESITHTNAFQNLTRLRKLNLSFNYRKK 348
Query: 180 IPSSVFMHLS 189
+ S +HL+
Sbjct: 349 V-SFARLHLA 357
Score = 75 (31.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 32/134 (23%), Positives = 57/134 (42%)
Query: 139 GVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
G+ +L +L+L +NN+T + + +L+ L + +N I + +L+ LRVL +
Sbjct: 197 GLSNLTHLSLKYNNLTKVPR---QLPPSLEYLLVSYNLIVKLGPEDLANLTSLRVLDVGG 253
Query: 199 N-RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
N R AP + ++PE F + L+ + L +N +
Sbjct: 254 NCRRCDHAPNPCIECGQKS---------LHLHPETFHHLSHLEGLVLKDSSLHTLNSSWF 304
Query: 258 SILADLIYLDLGYN 271
L +L LDL N
Sbjct: 305 QGLVNLSVLDLSEN 318
Score = 71 (30.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 305 FSSQFKLQVLCLKRNRLAK-VT-TTAFTNLTNLIELDISYN---KLD--RLEVASFDPIE 357
F L VL L N L + +T T AF NLT L +L++S+N K+ RL +AS
Sbjct: 304 FQGLVNLSVLDLSENFLYESITHTNAFQNLTRLRKLNLSFNYRKKVSFARLHLASSFKNL 363
Query: 358 NSLRDLKISG 367
SL++L ++G
Sbjct: 364 VSLQELNMNG 373
Score = 66 (28.3 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + + LQ L + N + V F L E+++S+N L ++ + F
Sbjct: 687 GNQLKALTNGTLPNGTLLQKLDVSSNSIVSVVPAFFALAVELKEVNLSHNILKTVDRSWF 746
Query: 354 DPIENSLRDLKISGN 368
PI +L L + N
Sbjct: 747 GPIVMNLTVLDVRSN 761
Score = 64 (27.6 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGN 368
L+VL L N+L +T N T L +LD+S N + + V +F + L+++ +S N
Sbjct: 680 LEVLDLAGNQLKALTNGTLPNGTLLQKLDVSSNSIVSV-VPAFFALAVELKEVNLSHN 736
Score = 64 (27.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
N+ L L N+I + +S F+HLS+LR L+L N
Sbjct: 64 NITRLSLISNRIHHLHNSDFVHLSNLRQLNLKWN 97
>UNIPROTKB|P51890 [details] [associations]
symbol:LUM "Lumican" species:9031 "Gallus gallus"
[GO:0007601 "visual perception" evidence=IEA] [GO:0030199 "collagen
fibril organization" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0005583 "fibrillar collagen" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027219 PROSITE:PS51450 GO:GO:0005615 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0005583
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:M80584 IPI:IPI00592361 PIR:A41748
RefSeq:XP_416135.1 UniGene:Gga.4078 ProteinModelPortal:P51890
PRIDE:P51890 Ensembl:ENSGALT00000018392 GeneID:417891
KEGG:gga:417891 InParanoid:P51890 NextBio:20821127 Uniprot:P51890
Length = 343
Score = 164 (62.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 60/226 (26%), Positives = 103/226 (45%)
Query: 140 VPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES--IPSSVFMHLSDLRVLSL 196
VPS ++YL L +N I ++ + F + +LQ L LD N +E+ I VF L +L+ L +
Sbjct: 67 VPSGIKYLYLRNNMIEAIEENTFDNVTDLQWLILDHNHLENSKIKGRVFSKLKNLKKLHI 126
Query: 197 AHNRISK-LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPM 255
+N +++ + P +N I ++NP + + L ++ L+ +
Sbjct: 127 NYNNLTEAVGP----LPKTLDDLQLSHNKITKVNPGALEGLVNLTVIHLQNNQLKTDSIS 182
Query: 256 -MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVL 314
+ L L+YLDL +NQ N I ++ F LQ L
Sbjct: 183 GAFKGLNSLLYLDLSFNQLTKLPTGLPHSLLMLYFD---NNQISNIPDEYFQGFKTLQYL 239
Query: 315 CLKRNRLAK--VTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
L N+L + F N+T+L+ELD+S+N+L + S + +EN
Sbjct: 240 RLSHNKLTDSGIPGNVF-NITSLVELDLSFNQLKSIPTVS-ENLEN 283
Score = 134 (52.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 55/202 (27%), Positives = 92/202 (45%)
Query: 76 RGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI-GPIFQQFQHLEELHIT-NSFIPAIG 133
R +M I D T++ ++ + + I G +F + ++L++LHI N+ A+G
Sbjct: 77 RNNMIEAIEENTFDNVTDLQWLILDHNHLENSKIKGRVFSKLKNLKKLHINYNNLTEAVG 136
Query: 134 FHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN--KIESIPSSVFMHLSDL 191
P +L L L+HN IT + +G++NL ++L N K +SI S F L+ L
Sbjct: 137 PLP----KTLDDLQLSHNKITKVNPGALEGLVNLTVIHLQNNQLKTDSI-SGAFKGLNSL 191
Query: 192 RVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLEN 251
L L+ N+++KL P N I I E F+ + L+ + L +
Sbjct: 192 LYLDLSFNQLTKL-PTGLPHSLLMLYFDN--NQISNIPDEYFQGFKTLQYLRLSHNKLTD 248
Query: 252 IN-PMMYSILADLIYLDLGYNQ 272
P + L+ LDL +NQ
Sbjct: 249 SGIPGNVFNITSLVELDLSFNQ 270
Score = 103 (41.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 26/90 (28%), Positives = 52/90 (57%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNI--TSLLDYNFKGMMNLQELYLDFNK 176
++ L++ N+ I AI + F V L++L L HN++ + + F + NL++L++++N
Sbjct: 71 IKYLYLRNNMIEAIEENTFDNVTDLQWLILDHNHLENSKIKGRVFSKLKNLKKLHINYNN 130
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ + L DL+ L+HN+I+K+ P
Sbjct: 131 LTEAVGPLPKTLDDLQ---LSHNKITKVNP 157
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 42/139 (30%), Positives = 60/139 (43%)
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA-SFDPIENSLRDLKISGNN 369
L L L N++ KV A L NL + + N+L ++ +F + NSL L +S N
Sbjct: 142 LDDLQLSHNKITKVNPGALEGLVNLTVIHLQNNQLKTDSISGAFKGL-NSLLYLDLSFNQ 200
Query: 370 IQXXXXXXXXXXXXXXXXXXIADMNY-TDIPKGLFKMNPHLQFLNLSGNNLQD--IHNLL 426
+ D N ++IP F+ LQ+L LS N L D I +
Sbjct: 201 LTKLPTGLPHSLLMLYF-----DNNQISNIPDEYFQGFKTLQYLRLSHNKLTDSGIPGNV 255
Query: 427 YQSNI-KLTHLDLSRNKFK 444
+ NI L LDLS N+ K
Sbjct: 256 F--NITSLVELDLSFNQLK 272
Score = 52 (23.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF----DPIENS-LRDLKISGN 368
L L N+L + T + NL N + NK+++ ++SF P+ S + L++ GN
Sbjct: 264 LDLSFNQLKSIPTVS-ENLENFY---LQVNKINKFPLSSFCKVVGPLTYSKITHLRLDGN 319
Query: 369 NI 370
N+
Sbjct: 320 NL 321
>MGI|MGI:1914123 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914123 GO:GO:0016021
GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 InterPro:IPR000372
SMART:SM00013 HSSP:Q9BZR6 GeneTree:ENSGT00700000104056 Pfam:PF01463
CTD:9865 HOVERGEN:HBG066060 EMBL:AK122338 EMBL:AK004681
EMBL:AK033401 EMBL:AK051421 EMBL:BC043099 EMBL:BC059224
IPI:IPI00469248 RefSeq:NP_080093.1 UniGene:Mm.422727
UniGene:Mm.475802 UniGene:Mm.480530 ProteinModelPortal:Q9DBY4
SMR:Q9DBY4 STRING:Q9DBY4 PRIDE:Q9DBY4 Ensembl:ENSMUST00000127748
GeneID:66873 KEGG:mmu:66873 UCSC:uc009bzk.2 OMA:EFPCDRF
OrthoDB:EOG4KWJSW NextBio:322893 Bgee:Q9DBY4 Genevestigator:Q9DBY4
Uniprot:Q9DBY4
Length = 809
Score = 170 (64.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 72/296 (24%), Positives = 115/296 (38%)
Query: 124 ITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSS 183
ITN I A FH G LR L+L +N I SL F+ + L+ELYL N ++++
Sbjct: 71 ITN--ITAFDFHRL-G--QLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPG 125
Query: 184 VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFK 243
L LR+L N I +L+ N + + +F + L
Sbjct: 126 TLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLH 185
Query: 244 CRSCGLENINPMMYSILADLIYLDLGYN--QXXXXXXXXXXXXXXXXXXXXXGNHFPVIL 301
S + + +S L L +L+L N Q N +
Sbjct: 186 LESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLG 245
Query: 302 EKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
+ F +L +L L N+L + AF L L EL + N+L++L + +P+ +SL
Sbjct: 246 PRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPL-HSLE 304
Query: 362 DLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
L +SGN + + D + + +F +P L L+L GN
Sbjct: 305 ALDLSGNELSALHPATFGHQGRLRELS-LRDNALSALSGDIFAASPALYRLDLDGN 359
Score = 151 (58.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 62/258 (24%), Positives = 99/258 (38%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F++ LEEL++ N+ + A+ + LR L N I L +F+G+ +L +L L
Sbjct: 103 FEKLSRLEELYLGNNLLQALVPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRL 162
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI--NP 230
D N + ++P +VF L +L L L NRI L N++ +
Sbjct: 163 DGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHA 222
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
F ++ L T + L+++ P ++ L L L L NQ
Sbjct: 223 ATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALREL 282
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
GN + L+ L L N L+ + F + L EL + N L L
Sbjct: 283 RLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSG 342
Query: 351 ASFDPIENSLRDLKISGN 368
F +L L + GN
Sbjct: 343 DIF-AASPALYRLDLDGN 359
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDR 67
+ +L+ LDL YN I ++P+ F+ + + L + LYL ++ + P L
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKL---SRLEE----LYLGNNLLQALVPG----TLAPL 130
Query: 68 GRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNS 127
+ I+ G+ + G + G E L + + N +F +L LH+ ++
Sbjct: 131 RKLRILYANGNEIGRLSRGSFE-GLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESN 189
Query: 128 FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDY--NFKGMMNLQELYLDFNKIESIPSSVF 185
I +G + F + LR+LNL+ N + L + F + +L L L N ++ + VF
Sbjct: 190 RIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVF 249
Query: 186 MHLSDLRVLSLAHNRISKLAP 206
HL L +LSL+ N+++ LAP
Sbjct: 250 QHLPRLGLLSLSGNQLTHLAP 270
>UNIPROTKB|F1RP63 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:CU466998 RefSeq:XP_003482968.1
Ensembl:ENSSSCT00000010401 GeneID:100153917 KEGG:ssc:100153917
Uniprot:F1RP63
Length = 842
Score = 129 (50.5 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 38/135 (28%), Positives = 59/135 (43%)
Query: 140 VPSLR--YLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
VP+ R +L+L +N +T L +F G+ N ++L FN I I + F L L+ L +
Sbjct: 63 VPASRPFHLSLLNNGLTMLHANDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKKLHIN 122
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
HN + L N I I P F + LK +E++ P ++
Sbjct: 123 HNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNVF 182
Query: 258 SILADLIYLDLGYNQ 272
+ L +LDL NQ
Sbjct: 183 RFVP-LTHLDLRGNQ 196
Score = 116 (45.9 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 48/166 (28%), Positives = 72/166 (43%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
+SA C +C C D G I C D+ + Q+ VP+ P HL++
Sbjct: 27 ASARGSCDSLCNCEEKD-GTMLINCEEKDIKK---LSQIS--------VPASR-PFHLSL 73
Query: 110 GPIFQQFQHLEELH-ITNSFIPAIGFH--------PFWGVPSLRYLNLTHNNITSLLDYN 160
H + +TN+ +GF+ F G+ L+ L++ HN++ L +
Sbjct: 74 LNNGLTMLHANDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKKLHINHNSLEILKEDT 133
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
F G+ NL+ L D N I I S F L+ L+VL L N I L P
Sbjct: 134 FHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPP 179
Score = 97 (39.2 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L++LHI ++ + + F G+ +L +L +N IT + F + L+ L L+ N IE
Sbjct: 116 LKKLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIE 175
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKL 204
S+P +VF + L L L N++ L
Sbjct: 176 SLPPNVFRFVP-LTHLDLRGNQLQTL 200
Score = 89 (36.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N V+ E SF + +LQ L L N L K++ F L NL L + YN + + +F+
Sbjct: 399 NRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPGTFN 458
Query: 355 PIENSLRDLKISGNNIQ 371
P+ L+ L ++ N +Q
Sbjct: 459 PMPK-LKVLYLNNNLLQ 474
Score = 69 (29.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
L + N+++ LE SF + L+ L ++GN++ + +
Sbjct: 394 LHLGNNRIEVLEEGSFMNLTR-LQKLYLNGNHL-TKLSGGMFLGLHNLEYLYLEYNGVKE 451
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443
I G F P L+ L L+ N LQ + ++ S + LT ++L N+F
Sbjct: 452 ILPGTFNPMPKLKVLYLNNNLLQVLPPHIF-SGVPLTRINLKTNQF 496
Score = 44 (20.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + F L+ L L+ N + ++ F + L L ++ N L L F
Sbjct: 422 GNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIF 481
Query: 354 DPIENSLRDLK 364
+ + +LK
Sbjct: 482 SGVPLTRINLK 492
Score = 43 (20.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
+ +G F LQ L L+GN+L + ++ L +L L N K
Sbjct: 404 LEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVK 450
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 166 (63.5 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 70/286 (24%), Positives = 112/286 (39%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQ 115
CP C C +D C ++ +P +D T L + S N L G +F
Sbjct: 35 CPAPCHCQ-EDGIMLSADCSELGLS-VVP-ADLDPLTAYLDL--SMNNLTELQPG-LFHH 88
Query: 116 FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN 175
+ LEEL ++ + + I F G+ SL+ L L N + + + +LQ L LD N
Sbjct: 89 LRFLEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDAN 148
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKD 235
I +P F LS LR L L N ++++ R N I I F++
Sbjct: 149 LISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQN 208
Query: 236 IQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGN 295
+ L + ++++ + L +L LDL YN+ N
Sbjct: 209 LTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPLAIRTLGRLQELGFH-NN 267
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
+ I EK+F LQ + N + V +AF L+ L L ++
Sbjct: 268 NIKAIPEKAFMGSPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLN 313
Score = 166 (63.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 69/267 (25%), Positives = 105/267 (39%)
Query: 105 NHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+ P FQ L LH+ N+ I +G H F G+ +L L+L +N + +
Sbjct: 196 NHIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEF-PLAIR 254
Query: 163 GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX- 221
+ LQEL N I++IP FM L+ + N I +
Sbjct: 255 TLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLNG 314
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXX 281
DI E P++ K L+ G+ + P + L L L+L +NQ
Sbjct: 315 ATDIQEF-PDL-KGTTSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQIEELPSLHR 372
Query: 282 XXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDIS 341
N I +FS LQ L L N + + AF+ L +L++LD++
Sbjct: 373 CQKLEEIGLRH--NRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLT 430
Query: 342 YNKLDRLEVASFDPIENSLRDLKISGN 368
N+L L +A L LK+ GN
Sbjct: 431 DNQLTTLPLAGL----GGLMHLKLKGN 453
Score = 121 (47.7 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 48/203 (23%), Positives = 79/203 (38%)
Query: 171 YLDF--NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI 228
YLD N + + +F HL L L L+ N +S + + N + I
Sbjct: 70 YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGI 129
Query: 229 NPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXX 288
E ++ L++ + + + + + L+ L +L L N
Sbjct: 130 PAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQ 189
Query: 289 XXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
NH I + +F + L VL L NR+ V T +F L NL LD++YN+L
Sbjct: 190 AMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEF 249
Query: 349 EVASFDPIENSLRDLKISGNNIQ 371
+A L++L NNI+
Sbjct: 250 PLAI--RTLGRLQELGFHNNNIK 270
Score = 51 (23.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 397 DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+I F LQ L+LS N ++ IH + + L LDL+ N+
Sbjct: 388 EIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQ 433
Score = 47 (21.6 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 14 LDLSYNDIVEINPEIFKDIQ 33
LDLS N++ E+ P +F ++
Sbjct: 71 LDLSMNNLTELQPGLFHHLR 90
>UNIPROTKB|F1S7K2 [details] [associations]
symbol:LRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615 OMA:RCAGPEA
GO:GO:0050873 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00690000102197 EMBL:CU972396
ProteinModelPortal:F1S7K2 Ensembl:ENSSSCT00000014761 Uniprot:F1S7K2
Length = 347
Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 56/228 (24%), Positives = 92/228 (40%)
Query: 145 YLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
YL N+T + +G+ NLQEL+L N++E + + + + L+VL L N + +L
Sbjct: 72 YLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRL 131
Query: 205 APRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
P N + ++ + ++ L+ L + + + DL
Sbjct: 132 PPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLH 191
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
LDLG NQ GN V+ E + Q KL+ L L N+L +
Sbjct: 192 ILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTL 251
Query: 325 TTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLK----ISGN 368
AF L L LD+S N L + + + + ++K ISGN
Sbjct: 252 AAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGN 299
>MGI|MGI:2153463 [details] [associations]
symbol:Rxfp2 "relaxin/insulin-like family peptide receptor
2" species:10090 "Mus musculus" [GO:0001556 "oocyte maturation"
evidence=ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IMP] [GO:0007193 "adenylate
cyclase-inhibiting G-protein coupled receptor signaling pathway"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0008584 "male gonad development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IMP] [GO:0017046 "peptide hormone
binding" evidence=ISO] [GO:0030819 "positive regulation of cAMP
biosynthetic process" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002172 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 MGI:MGI:2153463 GO:GO:0016021
GO:GO:0005886 GO:GO:0043066 GO:GO:0008285 GO:GO:0007189
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0007193
GO:GO:0030819 GO:GO:0008584 GO:GO:0017046 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 GO:GO:0001556 GO:GO:0016500
HOVERGEN:HBG026354 GeneTree:ENSGT00650000093266
HOGENOM:HOG000049056 CTD:122042 KO:K04307 OrthoDB:EOG47M1XF
OMA:KILCCAD EMBL:AF346501 EMBL:AC077689 EMBL:BC120741
IPI:IPI00131616 RefSeq:NP_536716.2 UniGene:Mm.444643
ProteinModelPortal:Q91ZZ5 SMR:Q91ZZ5 STRING:Q91ZZ5
PhosphoSite:Q91ZZ5 PRIDE:Q91ZZ5 Ensembl:ENSMUST00000065745
GeneID:140498 KEGG:mmu:140498 InParanoid:Q0VB90 NextBio:369832
Bgee:Q91ZZ5 CleanEx:MM_RXFP2 Genevestigator:Q91ZZ5
GermOnline:ENSMUSG00000053368 Uniprot:Q91ZZ5
Length = 737
Score = 176 (67.0 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 55/203 (27%), Positives = 86/203 (42%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ L L NKI +P VF ++LR + L HN I+ ++ R +N I
Sbjct: 121 NVTLLSLKKNKIHRLPVKVFSRYTELRKIYLQHNCITHISRRAFLGLHNLQILYLSHNCI 180
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ P IFKD+ +L + I+ + L L +L + N+
Sbjct: 181 TSLRPGIFKDLHQLAWLILDDNPITRISQKSFMGLNSLFFLSMVGNRLEALPETLCAQMP 240
Query: 286 XXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL 345
N I +F + L VL L RN++ V F++L NL ELD+S N +
Sbjct: 241 QLNWVDLANNGIKYITNSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNMI 300
Query: 346 DRLEVASFDPIENSLRDLKISGN 368
+L V F + + L+ L +S N
Sbjct: 301 TKLPVHLFSDL-HLLQKLNLSSN 322
Score = 161 (61.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 74/303 (24%), Positives = 119/303 (39%)
Query: 71 EIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIP 130
E+ C + D+ +P ++ +L + ++N H +F ++ L ++++ ++ I
Sbjct: 104 ELECVKADL-KAVP--KVSSNVTLLSL---KKNKIHRLPVKVFSRYTELRKIYLQHNCIT 157
Query: 131 AIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSD 190
I F G+ +L+ L L+HN ITSL FK + L L LD N I I FM L+
Sbjct: 158 HISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKSFMGLNS 217
Query: 191 LRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE 250
L LS+ NR+ L N I I F L +
Sbjct: 218 LFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVLFLPRNQIG 277
Query: 251 NINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFK 310
+ +S L +L LDL N N + + F S +
Sbjct: 278 FVPEKTFSSLKNLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNPLLYVHKNQFGSLKQ 337
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNLIELDI------SYNKLDRLEVASFDPIENSLRDLK 364
LQ L L+R + ++T F + NL + + SY R+ + S D I +S DL
Sbjct: 338 LQSLDLERIEIPNISTGMFQPMKNLSHIYLKTFRYCSYVPHVRICMPSTDGISSS-EDLL 396
Query: 365 ISG 367
+G
Sbjct: 397 ANG 399
Score = 37 (18.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 458 NIHKAAKNSFALQSSMGKNAEYA 480
+IHK A + ++S +GK A
Sbjct: 598 SIHKTALQTAEVRSHIGKEVAVA 620
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 46/147 (31%), Positives = 74/147 (50%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S + CP C C+ + R ++C R ++A +P + + T L + +EN +
Sbjct: 53 SPPATSCPAACSCS-NQASR--VICTRRELAE-VP-ASIPVNTRYLNL---QENSIQVIR 104
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F+ +HLE L ++ + + I F G+PSL L L N +T++ F+ + L+E
Sbjct: 105 TDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRE 164
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSL 196
L+L N IESIPS F + LR L L
Sbjct: 165 LWLRNNPIESIPSYAFNRVPSLRRLDL 191
Score = 151 (58.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 57/219 (26%), Positives = 86/219 (39%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P + RYLNL N+I + FK + +L+ L L N + I F L L L L
Sbjct: 86 IPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD 145
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG-LENINPMMY 257
NR++ + + N I I F + L+ LE I+ +
Sbjct: 146 NRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAF 205
Query: 258 SILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLK 317
L +L YL+LG GN +I SF L+ L L
Sbjct: 206 EGLVNLRYLNLG--MCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM 263
Query: 318 RNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
++A + AF +L +L EL++S+N L L F P+
Sbjct: 264 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL 302
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 46/147 (31%), Positives = 74/147 (50%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S + CP C C+ + R ++C R ++A +P + + T L + +EN +
Sbjct: 53 SPPATSCPAACSCS-NQASR--VICTRRELAE-VP-ASIPVNTRYLNL---QENSIQVIR 104
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F+ +HLE L ++ + + I F G+PSL L L N +T++ F+ + L+E
Sbjct: 105 TDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRE 164
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSL 196
L+L N IESIPS F + LR L L
Sbjct: 165 LWLRNNPIESIPSYAFNRVPSLRRLDL 191
Score = 151 (58.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 57/219 (26%), Positives = 86/219 (39%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P + RYLNL N+I + FK + +L+ L L N + I F L L L L
Sbjct: 86 IPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD 145
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG-LENINPMMY 257
NR++ + + N I I F + L+ LE I+ +
Sbjct: 146 NRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAF 205
Query: 258 SILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLK 317
L +L YL+LG GN +I SF L+ L L
Sbjct: 206 EGLVNLRYLNLG--MCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM 263
Query: 318 RNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
++A + AF +L +L EL++S+N L L F P+
Sbjct: 264 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL 302
>UNIPROTKB|F1NWG8 [details] [associations]
symbol:F1NWG8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050808 "synapse organization" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 OMA:IRQCSMI EMBL:AADN02035971
IPI:IPI00583715 Ensembl:ENSGALT00000003872 Uniprot:F1NWG8
Length = 520
Score = 166 (63.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 60/247 (24%), Positives = 102/247 (41%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L + ++FI + F L +L+L HN I ++ + +F+G+ L+EL L NKI +P
Sbjct: 71 LSLRHNFITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLP 130
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
++ F L +L+ L L+ N++S L P N + I +F D + L+
Sbjct: 131 NTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 190
Query: 242 FKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVIL 301
+ L ++ ++ L L L L +NQ N +
Sbjct: 191 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 250
Query: 302 EKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
+ L+ L L N + + T F + NL L + NKL L+ + SL
Sbjct: 251 CGMEWTWGTLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTLDSKILRSLP-SLS 309
Query: 362 DLKISGN 368
+ +SGN
Sbjct: 310 TVGLSGN 316
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L+ LH+ ++ + I FW SL +L+L+ N + SL F G++ L+EL+L+ N++
Sbjct: 164 LQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLT 223
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
I + F+ LS L L L N+IS L NDI I+ +F+ +
Sbjct: 224 KINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETMPN 283
Query: 239 LKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
LKT + L ++ + L L + L N
Sbjct: 284 LKTLLLDNNKLSTLDSKILRSLPSLSTVGLSGN 316
Score = 145 (56.1 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 63/272 (23%), Positives = 103/272 (37%)
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
Y D S+P++ L LSL HN I++L +N I +
Sbjct: 51 YCDSQGFHSVPNTT--EKGSLG-LSLRHNFITELERDQFASFSQLTWLHLDHNQIATVRE 107
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
+ F+ + +LK S + ++ +S L +L LDL +NQ
Sbjct: 108 DSFQGLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTL 167
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
N I + F L+ L L NRL + F L L EL + +N+L ++
Sbjct: 168 HLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINF 227
Query: 351 ASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIA-DMNYTDIPKGLFKMNPHL 409
A F + +SL L + N I D+ D+ +F+ P+L
Sbjct: 228 AHFLRL-SSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNDIKAIDLT--VFETMPNL 284
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ L L N L + + + +S L+ + LS N
Sbjct: 285 KTLLLDNNKLSTLDSKILRSLPSLSTVGLSGN 316
>ZFIN|ZDB-GENE-040220-4 [details] [associations]
symbol:tlr21 "toll-like receptor 21" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-4 GO:GO:0007165 InterPro:IPR003591
SMART:SM00369 GO:GO:0005622 GO:GO:0052033 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:BX571826 IPI:IPI00487094
RefSeq:NP_001186264.1 UniGene:Dr.161713 UniGene:Dr.85003
Ensembl:ENSDART00000060142 GeneID:402884 KEGG:dre:402884 CTD:402884
OMA:LTLDNSC NextBio:20816703 ArrayExpress:F1QMN8 Bgee:F1QMN8
Uniprot:F1QMN8
Length = 989
Score = 149 (57.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 53/226 (23%), Positives = 96/226 (42%)
Query: 148 LTHNNITSLLDYNFKGMMNL-QELYLDFNKIESIPSSVFMH-LSDLRVLSLAHNRISKLA 205
L N+I +L + F+ ++ +E+ L N+++S F+H + L+ L + HN ++KL
Sbjct: 315 LQSNSIGALKNNTFRYCPSITREMDLSRNELKSAGCLQFLHNQTQLKSLKMEHNHLTKLT 374
Query: 206 P-RXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLI 264
YN I++I+ F + +L+ + + ++ S L DL
Sbjct: 375 SCNKAEIHNSLTNLSYRYNRILQISGYAFSNTPKLEILELNINIIAYMDHKALSGLKDLK 434
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
L L N N VI +F + KL +L L N+++++
Sbjct: 435 TLRLDNNLLSDIYNDSFEDLTNLKTLNLRNNEIAVIFNYTFQNLSKLDILDLGGNKISQL 494
Query: 325 TTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
AF L +L L + N L ++V F + +L+ L + GN I
Sbjct: 495 KPHAFDGLYSLTNLYLDRNHLKMIDVVLFGKLSGTLQVLDLQGNMI 540
Score = 143 (55.4 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 71/314 (22%), Positives = 121/314 (38%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMN-LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
L+ L + HN++T L N + N L L +N+I I F + L +L L N I
Sbjct: 360 LKSLKMEHNHLTKLTSCNKAEIHNSLTNLSYRYNRILQISGYAFSNTPKLEILELNINII 419
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
+ + + N + +I + F+D+ LKT R+ + I + L+
Sbjct: 420 AYMDHKALSGLKDLKTLRLDNNLLSDIYNDSFEDLTNLKTLNLRNNEIAVIFNYTFQNLS 479
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSS-QFKLQVLCLKRNR 320
L LDLG N+ NH +I F LQVL L+ N
Sbjct: 480 KLDILDLGGNKISQLKPHAFDGLYSLTNLYLDRNHLKMIDVVLFGKLSGTLQVLDLQGNM 539
Query: 321 L---AKVTTTAFTNLTNLIELDISY---NKLDRLEVASFDPIENSLRDLKISGNNI-QXX 373
+ + T + F N++ L +L ++ N ++ L A F + SL+ L ++ N+I
Sbjct: 540 IMYFTEHTHSPFKNMSRLYDLKLNGQQPNGINLLPRAFFRGL-TSLKSLYLTNNHIIGFG 598
Query: 374 XXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKL 433
+ + G+FK L+ L+L ++ ++ + L
Sbjct: 599 DETFDDLKNLDYLTLDNSCAGVAQLQSGIFKSLQKLRTLSLENMGIKSFSKDVFGNLTGL 658
Query: 434 THLDLSRNKFKGFD 447
L L+RN D
Sbjct: 659 KTLHLNRNPMMSLD 672
Score = 128 (50.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 39/134 (29%), Positives = 60/134 (44%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNR 200
P+ L ++H+NI + +F + NL L LD N I +I F +L L+ L+L+ N
Sbjct: 60 PTALNLTISHSNIEYVQSQSFDHLPNLTALILDANHITNIDKDAFNNLHHLQTLNLSCNN 119
Query: 201 ISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSI- 259
IS L N + + +F + LK R L N + ++ SI
Sbjct: 120 ISFLHRDVFSDLHNLTQLLLGSNKLTNPDKYLFSSLTNLKILDLRRNHLYNFSSVVESIT 179
Query: 260 -LADLIYLDLGYNQ 272
L LI LDL +N+
Sbjct: 180 NLTSLIKLDLSFNK 193
Score = 113 (44.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/176 (28%), Positives = 80/176 (45%)
Query: 305 FSSQFKLQVLCLKRNRLAKVTTT--AFTNLTNLIELDISYNKLDRLEVASFDPIENSLRD 362
FSS L++L L+RN L ++ + TNLT+LI+LD+S+NKL L+ ++ P SL
Sbjct: 152 FSSLTNLKILDLRRNHLYNFSSVVESITNLTSLIKLDLSFNKLTTLQHSTHLP--ESLAL 209
Query: 363 LKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMN-PHLQFLNLSGNNLQD 421
L + N ++ ++D N K + ++ +L L N+
Sbjct: 210 LYLGDNKLKTLGCDKSFLMNVKKLD--LSD-NKNLASKSFLGLKLENITYLRLRFTNIS- 265
Query: 422 IHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKN-IHKAAK-NSFALQS-SMG 474
I LL N+ H+D S K K S + +N HK + LQS S+G
Sbjct: 266 IFKLLTYPNVHPWHIDFSGLKLKNSHALSSLCVLMRNHSHKHLQIPKMLLQSNSIG 321
Score = 102 (41.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 41/156 (26%), Positives = 68/156 (43%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENP--NHLTI 109
A+ +C C+ R EI + + + D+ V + P+ N +H I
Sbjct: 13 ATFICLIKLACSYSFRSCIEIPDSNHTIFTCVKSYERDITAIVSDVFPTALNLTISHSNI 72
Query: 110 GPI-FQQFQHLEELH---ITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMM 165
+ Q F HL L + + I I F + L+ LNL+ NNI+ L F +
Sbjct: 73 EYVQSQSFDHLPNLTALILDANHITNIDKDAFNNLHHLQTLNLSCNNISFLHRDVFSDLH 132
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
NL +L L NK+ + +F L++L++L L N +
Sbjct: 133 NLTQLLLGSNKLTNPDKYLFSSLTNLKILDLRRNHL 168
Score = 91 (37.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 38/139 (27%), Positives = 63/139 (45%)
Query: 307 SQFKLQVLCLKRNRLAKVTTTAFTNLTN-LIELDISYNKLDRLEVASFDPIENSLRDLKI 365
+Q +L+ L ++ N L K+T+ + N L L YN++ L+++ + N+ + L+I
Sbjct: 356 NQTQLKSLKMEHNHLTKLTSCNKAEIHNSLTNLSYRYNRI--LQISGY-AFSNTPK-LEI 411
Query: 366 SGNNIQXXXXXXXXXXXXXXXXXXIA-DMNY-TDIPKGLFKMNPHLQFLNLSGNNLQDIH 423
NI + D N +DI F+ +L+ LNL N + I
Sbjct: 412 LELNINIIAYMDHKALSGLKDLKTLRLDNNLLSDIYNDSFEDLTNLKTLNLRNNEIAVIF 471
Query: 424 NLLYQSNIKLTHLDLSRNK 442
N +Q+ KL LDL NK
Sbjct: 472 NYTFQNLSKLDILDLGGNK 490
Score = 84 (34.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L I++S I + F +P+L L L N+IT++ F + +LQ L L N I +
Sbjct: 65 LTISHSNIEYVQSQSFDHLPNLTALILDANHITNIDKDAFNNLHHLQTLNLSCNNISFLH 124
Query: 182 SSVFMHLSDLRVLSLAHNRIS 202
VF L +L L L N+++
Sbjct: 125 RDVFSDLHNLTQLLLGSNKLT 145
Score = 78 (32.5 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 105 NHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFK 162
NH+T I F HL+ L+++ + I + F + +L L L N +T+ Y F
Sbjct: 94 NHITNIDKDAFNNLHHLQTLNLSCNNISFLHRDVFSDLHNLTQLLLGSNKLTNPDKYLFS 153
Query: 163 GMMNLQELYLDFNKIESIPSSV--FMHLSDLRVLSLAHNRISKL 204
+ NL+ L L N + + S V +L+ L L L+ N+++ L
Sbjct: 154 SLTNLKILDLRRNHLYNFSSVVESITNLTSLIKLDLSFNKLTTL 197
Score = 52 (23.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 11 LKSLDLSYNDIVEINPEIFKDIQDTTML 38
L++L+LS N+I ++ ++F D+ + T L
Sbjct: 110 LQTLNLSCNNISFLHRDVFSDLHNLTQL 137
>MGI|MGI:3039578 [details] [associations]
symbol:Ecm2 "extracellular matrix protein 2, female organ
and adipocyte specific" species:10090 "Mus musculus" [GO:0005518
"collagen binding" evidence=IDA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005614 "interstitial matrix" evidence=IDA]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0010811 "positive
regulation of cell-substrate adhesion" evidence=IDA] [GO:0030198
"extracellular matrix organization" evidence=IDA] [GO:0031012
"extracellular matrix" evidence=IDA] [GO:0070052 "collagen V
binding" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001007 Pfam:PF00093 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS51450 SMART:SM00214 MGI:MGI:3039578 eggNOG:COG4886
GO:GO:0030198 GO:GO:0008201 GO:GO:0010811
GeneTree:ENSGT00700000104006 GO:GO:0005614 GO:GO:0070052
InterPro:IPR026906 Pfam:PF13306 HSSP:P24014 CTD:1842
HOGENOM:HOG000112319 HOVERGEN:HBG031529 KO:K08119 OrthoDB:EOG4868CR
OMA:AVWSPKP EMBL:AK038812 EMBL:AK040995 EMBL:AK134746 EMBL:BC065151
EMBL:BC089559 IPI:IPI00461535 RefSeq:NP_001012324.1
UniGene:Mm.386931 ProteinModelPortal:Q5FW85 SMR:Q5FW85
STRING:Q5FW85 PhosphoSite:Q5FW85 PRIDE:Q5FW85
Ensembl:ENSMUST00000051504 GeneID:407800 KEGG:mmu:407800
UCSC:uc007qjl.1 InParanoid:Q5FW85 NextBio:407225 Bgee:Q5FW85
Genevestigator:Q5FW85 Uniprot:Q5FW85
Length = 670
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 65/236 (27%), Positives = 99/236 (41%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES--IPSSVFMHLSDLRVLSLAH 198
P + L L N+I S+ D F G+ NL+ L L N I S I F L L L++
Sbjct: 314 PEVTNLELVGNSIISIPDEAFNGLPNLERLDLSRNNITSSGIGPKAFKSLKKLMRLNMDG 373
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENIN--PMM 256
N + + P N++ I+ + D+ +L T + L IN P+
Sbjct: 374 NNLVHI-PSDLPSTLEELKIND--NNLQAIDEKSLSDLNQLVTLELEGNNLSEINVDPLA 430
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L L YL LG N+ N I E F+ K+ ++ L
Sbjct: 431 FQSLESLSYLRLGRNKFRIIPQGLPASTEELYLE---NNQIEEITEICFNHTRKITMIIL 487
Query: 317 KRNRL--AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
+ N++ +++ A+ N NL +D+SYNKL V S+ P SL L + GN I
Sbjct: 488 RYNKIEESRIAPLAWINQENLESIDLSYNKL--YHVPSYLP--KSLLHLVLIGNQI 539
Score = 148 (57.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 80/344 (23%), Positives = 134/344 (38%)
Query: 124 ITNSFIPAIGFHPFWGVPSLRYLNLTHNNITS--LLDYNFKGMMNLQELYLDFNKIESIP 181
+ NS I +I F G+P+L L+L+ NNITS + FK + L L +D N + IP
Sbjct: 322 VGNSII-SIPDEAFNGLPNLERLDLSRNNITSSGIGPKAFKSLKKLMRLNMDGNNLVHIP 380
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN--PEIFKDIQEL 239
S + L +L++ N + + + N++ EIN P F+ ++ L
Sbjct: 381 SDLPSTLEELKIND---NNLQAIDEKSLSDLNQLVTLELEGNNLSEINVDPLAFQSLESL 437
Query: 240 KTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPV 299
+ I P + +YL+ NQ N
Sbjct: 438 SYLRLGRNKFRII-PQGLPASTEELYLE--NNQIEEITEICFNHTRKITMIILRYNKIEE 494
Query: 300 --ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
I ++ +Q L+ + L N+L V + +L +L+ + N++DR+ F ++
Sbjct: 495 SRIAPLAWINQENLESIDLSYNKLYHVPSYLPKSLLHLVLIG---NQIDRIPGYVFGHMQ 551
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXI-ADMN-YTDIPKGLFKMNPHLQFLNLS 415
L L +S N + + D N + IP G+ M L FL L+
Sbjct: 552 PGLEYLYLSFNRLSDDGVDLVSFYGAYHSLRELFLDHNDFKSIPPGIQDMKA-LHFLRLN 610
Query: 416 GNNLQDIH-----NLLYQSNIKLTHLDLSRNKFKGFDEKSYIMS 454
N +++IH N + L HL L N + + SY S
Sbjct: 611 NNKIRNIHPEQICNAEEDEDSALEHLHLENNYIRTREISSYAFS 654
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 167 (63.8 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 46/147 (31%), Positives = 74/147 (50%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S + CP C C+ + R ++C R ++A +P + + T L + +EN +
Sbjct: 51 SPPATSCPAACSCS-NQASR--VICTRRELAE-VP-ASIPVNTRYLNL---QENGIQVIR 102
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F+ +HLE L ++ + + I F G+PSL L L N +T++ F+ + L+E
Sbjct: 103 TDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRE 162
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSL 196
L+L N IESIPS F + LR L L
Sbjct: 163 LWLRNNPIESIPSYAFNRVPSLRRLDL 189
Score = 150 (57.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 57/219 (26%), Positives = 85/219 (38%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P + RYLNL N I + FK + +L+ L L N + I F L L L L
Sbjct: 84 IPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD 143
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG-LENINPMMY 257
NR++ + + N I I F + L+ LE I+ +
Sbjct: 144 NRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAF 203
Query: 258 SILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLK 317
L +L YL+LG GN +I SF L+ L L
Sbjct: 204 EGLVNLRYLNLG--MCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM 261
Query: 318 RNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
++A + AF +L +L EL++S+N L L F P+
Sbjct: 262 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL 300
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 167 (63.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 46/147 (31%), Positives = 74/147 (50%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTI 109
S + CP C C+ + R ++C R ++A +P + + T L + +EN +
Sbjct: 51 SPPATSCPAACSCS-NQASR--VICTRRELAE-VP-ASIPVNTRYLNL---QENGIQVIR 102
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
F+ +HLE L ++ + + I F G+PSL L L N +T++ F+ + L+E
Sbjct: 103 TDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRE 162
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSL 196
L+L N IESIPS F + LR L L
Sbjct: 163 LWLRNNPIESIPSYAFNRVPSLRRLDL 189
Score = 150 (57.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 57/219 (26%), Positives = 85/219 (38%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P + RYLNL N I + FK + +L+ L L N + I F L L L L
Sbjct: 84 IPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD 143
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG-LENINPMMY 257
NR++ + + N I I F + L+ LE I+ +
Sbjct: 144 NRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAF 203
Query: 258 SILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLK 317
L +L YL+LG GN +I SF L+ L L
Sbjct: 204 EGLVNLRYLNLG--MCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM 261
Query: 318 RNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
++A + AF +L +L EL++S+N L L F P+
Sbjct: 262 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL 300
>ZFIN|ZDB-GENE-040426-1130 [details] [associations]
symbol:chad "chondroadherin" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040426-1130
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM InterPro:IPR026906 Pfam:PF13306
EMBL:BC054898 EMBL:CU468779 IPI:IPI00486284 RefSeq:NP_957357.1
UniGene:Dr.80402 IntAct:Q7SYE5 STRING:Q7SYE5 GeneID:394038
KEGG:dre:394038 InParanoid:Q7SYE5 NextBio:20815000 Uniprot:Q7SYE5
Length = 363
Score = 162 (62.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 48/189 (25%), Positives = 85/189 (44%)
Query: 51 SASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIG 110
+A CP C C D + ++C + IP ++ T +L + N +L G
Sbjct: 22 AAPTQCPSQCHCHGDLQ---HVICDNVGLKK-IP--RISEATRLLNL--QRNNLGNLPTG 73
Query: 111 PIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQEL 170
F + + L LH+ + I + F G+ L YL L+ N I+++ F+ + L L
Sbjct: 74 G-FSEMKGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDLTELTYL 132
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINP 230
YLD N+I S+P +F + +L +L L +N++ +L P N++ I P
Sbjct: 133 YLDGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELSSIQP 192
Query: 231 EIFKDIQEL 239
+++ L
Sbjct: 193 GSLDEVENL 201
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 61/232 (26%), Positives = 90/232 (38%)
Query: 129 IPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHL 188
+P GF G+ SL +L H I L FKG+ L LYL N+I +I F L
Sbjct: 70 LPTGGFSEMKGLISL---HLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDL 126
Query: 189 SDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG 248
++L L L N+I+ L N + E+ P FK ++L+
Sbjct: 127 TELTYLYLDGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNE 186
Query: 249 LENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
L +I P + +L L L N N +I + +F S
Sbjct: 187 LSSIQPGSLDEVENLAILTLDQNNLSTYPLLAMSKLRVVEELNLSKNPLSLIPDHAFRSF 246
Query: 309 FK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA-SFDPIEN 358
+ ++ L L L K + AF +T L L + NKL L + F I+N
Sbjct: 247 GRYMEKLHLNDMSLEKFSNAAFEGVTALKSLHLENNKLRSLPNSLEFSTIQN 298
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 49/229 (21%), Positives = 87/229 (37%)
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
R LNL NN+ +L F M L L+L +I + F L+ L L L+ N IS
Sbjct: 58 RLLNLQRNNLGNLPTGGFSEMKGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEIST 117
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADL 263
+ P N I + IF + L + + L + P + DL
Sbjct: 118 IKPGAFEDLTELTYLYLDGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGTFKGAKDL 177
Query: 264 IYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAK 323
+L + N+ N+ + S ++ L L +N L+
Sbjct: 178 RWLYMSGNELSSIQPGSLDEVENLAILTLDQNNLSTYPLLAMSKLRVVEELNLSKNPLSL 237
Query: 324 VTTTAFTNLTNLIE-LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
+ AF + +E L ++ L++ A+F+ + +L+ L + N ++
Sbjct: 238 IPDHAFRSFGRYMEKLHLNDMSLEKFSNAAFEGV-TALKSLHLENNKLR 285
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 49/228 (21%), Positives = 88/228 (38%)
Query: 233 FKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXX 292
F +++ L + + C + ++ + L LIYL L N+
Sbjct: 75 FSEMKGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDLTELTYLYL 134
Query: 293 XGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
GN + + FS L +L L N+L ++ F +L L +S N+L ++ S
Sbjct: 135 DGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELSSIQPGS 194
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFK-MNPHLQF 411
D +EN L L + NN+ ++ + IP F+ +++
Sbjct: 195 LDEVEN-LAILTLDQNNLSTYPLLAMSKLRVVEELN-LSKNPLSLIPDHAFRSFGRYMEK 252
Query: 412 LNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNI 459
L+L+ +L+ N ++ L L L NK + S S +NI
Sbjct: 253 LHLNDMSLEKFSNAAFEGVTALKSLHLENNKLRSLPN-SLEFSTIQNI 299
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 169 (64.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 59/248 (23%), Positives = 104/248 (41%)
Query: 103 NPNHLTIGP--IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N +++ P IF+ HL+ L + + I + F G+ SLR L + N I+ L D
Sbjct: 200 NRNRMSMIPPKIFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGA 258
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
F G+ N++EL L+ N + + L L+ L ++ N I +++P
Sbjct: 259 FFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDL 318
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXX 280
YN + ++ F + L+ + +I ++ L++L LDL N+
Sbjct: 319 SYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDA 378
Query: 281 XXXXXXXXXXXXX---GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIE 337
GN I +K+F L+ L L N + + AF+ T+L E
Sbjct: 379 SEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQ-THLKE 437
Query: 338 LDISYNKL 345
L ++ + L
Sbjct: 438 LILNTSSL 445
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 91/428 (21%), Positives = 168/428 (39%)
Query: 37 MLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLK 96
+LF L LL ++ + +CP C C + + C R + P P + G
Sbjct: 24 LLFIAQTALLLLPAAGAGLCPAPCSCRIP-----LLDCSRRKL--PAPSWRALSGLLPPD 76
Query: 97 IVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPS--LRYLNLTHNNIT 154
+ + N L+ I + Q L+E+ + + + I P++G P+ + L+L HN I
Sbjct: 77 TAILDFSHNRLSNWNISLESQTLQEVKMNYNELTEI---PYFGEPTSNITLLSLVHNIIP 133
Query: 155 SLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL-APRXXXXXX 213
+ + L+ L L N I I +S F + L+ L+L++NRI+ L A
Sbjct: 134 EINAQALQFYPALESLDLSSNIISEIKTSSFPRMQ-LKYLNLSNNRITTLEAGCFDNLSS 192
Query: 214 XXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQX 273
N + I P+IFK + L+ + + ++ + + + L L L + N
Sbjct: 193 SLLVVKLNRNRMSMIPPKIFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGI 251
Query: 274 XXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLT 333
N+ + + LQ L + +N + +++ A+
Sbjct: 252 SKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQ 311
Query: 334 NLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI-QXXXXXXXXXXXXXXXXXXIAD 392
L ELD+SYN+L RL+ ++F + + L L + N + +
Sbjct: 312 RLSELDLSYNQLTRLDESAFVGL-SLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNE 370
Query: 393 MNYT-DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
+++ + F L L L GN ++ I + L HLDL+ N E ++
Sbjct: 371 ISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAF 430
Query: 452 IMSEPKNI 459
+ K +
Sbjct: 431 SQTHLKEL 438
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/234 (20%), Positives = 99/234 (42%)
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
+P L++L L N I + F+G+ +L+ L + N I + F L+++ L L HN
Sbjct: 214 LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHN 273
Query: 200 RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSI 259
++++ N I I+P+ ++ Q L L ++ +
Sbjct: 274 NLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVG 333
Query: 260 LADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILE---KSFSSQFKLQVLCL 316
L+ L L+LG N+ N +E ++F+ L L L
Sbjct: 334 LSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLIL 393
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
+ N++ +T AF L +L LD++ N + ++ +F + L++L ++ +++
Sbjct: 394 QGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFS--QTHLKELILNTSSL 445
Score = 130 (50.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 77/322 (23%), Positives = 123/322 (38%)
Query: 5 LIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECAL 64
L F L+SLDLS N I EI F +Q L L+ S + + C
Sbjct: 140 LQFYPALESLDLSSNIISEIKTSSFPRMQ-----------LKYLNLSNNRITTLEAGC-F 187
Query: 65 DDRGRYEIVCRRG-DMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELH 123
D+ +V + + + IP L L+ + + N + G FQ L L
Sbjct: 188 DNLSSSLLVVKLNRNRMSMIPPKIFKLPH--LQFLELKRNRIKIVEGLTFQGLDSLRSLK 245
Query: 124 ITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSS 183
+ + I + F+G+ ++ L L HNN+T + G+ LQ+LY+ N IE I
Sbjct: 246 MQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPD 305
Query: 184 VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFK 243
+ L L L++N++++L N + I +F+ + L+T
Sbjct: 306 AWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLD 365
Query: 244 CR----SCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPV 299
R S +E+ + ++ L L L L NQ N
Sbjct: 366 LRNNEISWAIEDASEA-FAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMS 424
Query: 300 ILEKSFSSQFKLQVLCLKRNRL 321
I E +FS Q L+ L L + L
Sbjct: 425 IQENAFS-QTHLKELILNTSSL 445
>UNIPROTKB|F1MSM8 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:DAAA02033778 IPI:IPI00713179 RefSeq:XP_001249506.1
RefSeq:XP_002691956.1 UniGene:Bt.87936 Ensembl:ENSBTAT00000005757
GeneID:781119 KEGG:bta:781119 NextBio:20924630 Uniprot:F1MSM8
Length = 842
Score = 127 (49.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 38/135 (28%), Positives = 58/135 (42%)
Query: 140 VPSLR--YLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
VP R +L+L +N +T L +F G+ N ++L FN I I + F L L+ L +
Sbjct: 63 VPPSRPFHLSLLNNGLTVLHTNDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLHIN 122
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
HN + L N I I P F + LK +E++ P ++
Sbjct: 123 HNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIF 182
Query: 258 SILADLIYLDLGYNQ 272
+ L +LDL NQ
Sbjct: 183 RFVP-LTHLDLRGNQ 196
Score = 114 (45.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 46/177 (25%), Positives = 78/177 (44%)
Query: 43 IFLYLLHSSASVMCPYMCECALDD---RGRYEIVCRRGDMANPIPIGQMDLGTEVL-KIV 98
++++LL+SS + + RG + +C + + I + G + L +I
Sbjct: 3 LWIHLLYSSLLACISSQSQSPMPSASARGSCDSLCNCEEKDGTMLINCEEKGIKKLSQIS 62
Query: 99 PSEENPNHLTIGPIFQQFQHLEELH-ITNSFIPAIGFH--------PFWGVPSLRYLNLT 149
P HL++ H + +TN+ +GF+ F G+ L+ L++
Sbjct: 63 VPPSRPFHLSLLNNGLTVLHTNDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLHIN 122
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
HN++ L + F G+ NL+ L D N I I S F L+ L+VL L N I L P
Sbjct: 123 HNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPP 179
Score = 97 (39.2 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 26/86 (30%), Positives = 46/86 (53%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L++LHI ++ + + F G+ +L +L +N IT + F + L+ L L+ N IE
Sbjct: 116 LKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIE 175
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKL 204
S+P ++F + L L L N++ L
Sbjct: 176 SLPPNIFRFVP-LTHLDLRGNQLQTL 200
Score = 89 (36.4 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N V+ E SF + +LQ L L N L K++ F L NL L + YN + + +F+
Sbjct: 399 NRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPGTFN 458
Query: 355 PIENSLRDLKISGNNIQ 371
P+ L+ L ++ N +Q
Sbjct: 459 PMPK-LKVLYLNNNLLQ 474
Score = 69 (29.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 338 LDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTD 397
L + N+++ LE SF + L+ L ++GN++ + +
Sbjct: 394 LHLGNNRIEVLEEGSFMNLTR-LQKLYLNGNHL-TKLSGGMFLGLHNLEYLYLEYNGVKE 451
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKF 443
I G F P L+ L L+ N LQ + ++ S + LT ++L N+F
Sbjct: 452 ILPGTFNPMPKLKVLYLNNNLLQVLPPHIF-SGVPLTRINLKTNQF 496
Score = 44 (20.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GNH + F L+ L L+ N + ++ F + L L ++ N L L F
Sbjct: 422 GNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIF 481
Query: 354 DPIENSLRDLK 364
+ + +LK
Sbjct: 482 SGVPLTRINLK 492
Score = 43 (20.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
+ +G F LQ L L+GN+L + ++ L +L L N K
Sbjct: 404 LEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVK 450
>UNIPROTKB|F1RHM5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:CT737345
Ensembl:ENSSSCT00000011101 Uniprot:F1RHM5
Length = 473
Score = 164 (62.8 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 50/202 (24%), Positives = 86/202 (42%)
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN-DIV 226
Q ++L N+I +P++ F +L +L L N ++++ N +
Sbjct: 60 QRVFLHGNRITYVPAASFRACRNLTILWLHSNALARIDATAFAGLVLLEQLDLSDNAQLR 119
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
++P F+ + L T CGL+ + P ++ LA L YL L N
Sbjct: 120 AVDPATFRGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNGLQALPDDAFRDLGN 179
Query: 287 XXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
GN P + E++F L L L +NR+A V AF +L L+ L + N L
Sbjct: 180 LTHLFLHGNRIPSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 239
Query: 347 RLEVASFDPIENSLRDLKISGN 368
L + P+ +L+ L+++ N
Sbjct: 240 ALSAEALAPLR-ALQYLRLNDN 260
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/151 (25%), Positives = 67/151 (44%)
Query: 91 GTEVLKIVPSEENPNHLTIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
G +L+ + +N + P F+ L LH+ + +G F G+ +L+YL L
Sbjct: 103 GLVLLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 162
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
N + +L D F+ + NL L+L N+I S+P F L L L L NR++ + P
Sbjct: 163 DNGLQALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF 222
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
N++ ++ E ++ L+
Sbjct: 223 RDLGRLMTLYLFANNLSALSAEALAPLRALQ 253
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 42/154 (27%), Positives = 68/154 (44%)
Query: 119 LEELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKI 177
LE+L ++ N+ + A+ F G+ L L+L + L F+G+ LQ LYL N +
Sbjct: 107 LEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNGL 166
Query: 178 ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQ 237
+++P F L +L L L NRI + R N + ++P F+D+
Sbjct: 167 QALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 226
Query: 238 ELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
L T + L ++ + L L YL L N
Sbjct: 227 RLMTLYLFANNLSALSAEALAPLRALQYLRLNDN 260
>MGI|MGI:2182081 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2182081
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:AF300458 EMBL:DQ177325 EMBL:BC117834 IPI:IPI00169875
RefSeq:NP_619623.2 UniGene:Mm.443660 ProteinModelPortal:Q99PH1
SMR:Q99PH1 DIP:DIP-46449N STRING:Q99PH1 PhosphoSite:Q99PH1
PRIDE:Q99PH1 Ensembl:ENSMUST00000062304 GeneID:192198
KEGG:mmu:192198 UCSC:uc009bcu.1 InParanoid:Q149E5 NextBio:371238
Bgee:Q99PH1 CleanEx:MM_LRRC4 Genevestigator:Q99PH1
GermOnline:ENSMUSG00000049939 Uniprot:Q99PH1
Length = 652
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 59/220 (26%), Positives = 88/220 (40%)
Query: 139 GVPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
G+PS RYLNL NNI + F+ + +L+ L L N I I F L+ L L L
Sbjct: 71 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 130
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG-LENINPMM 256
N ++ + N I I F + L LE I+
Sbjct: 131 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGA 190
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L +L YL+LG GNHFP I SF L+ L +
Sbjct: 191 FEGLFNLKYLNLG--MCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWV 248
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
++++ + AF L +L+EL++++N L L F P+
Sbjct: 249 MNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 288
Score = 137 (53.3 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 49/160 (30%), Positives = 74/160 (46%)
Query: 40 QVTIFLYLLHSSASV---MCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLK 96
QV I + ++AS CP +C C+ ++VC R ++ +P G + T L
Sbjct: 26 QVWILCAAIAAAASAGPQNCPSVCSCSNQFS---KVVCTRRGLSE-VPQG-IPSNTRYLN 80
Query: 97 IVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSL 156
++ EN + F+ HLE L + + I I F G+ SL L L N +T +
Sbjct: 81 LM---ENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVI 137
Query: 157 LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F+ + L+EL+L N IESIPS F + L L L
Sbjct: 138 PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 177
>UNIPROTKB|Q9HBW1 [details] [associations]
symbol:LRRC4 "Leucine-rich repeat-containing protein 4"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH236947
MEROPS:I43.001 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AF196976 EMBL:AJ297858 EMBL:AY358307
EMBL:AK172751 EMBL:AK314047 EMBL:BC111561 EMBL:BC111745
IPI:IPI00005516 RefSeq:NP_071426.1 UniGene:Hs.655003 PDB:2DL9
PDB:3ZYI PDBsum:2DL9 PDBsum:3ZYI ProteinModelPortal:Q9HBW1
SMR:Q9HBW1 STRING:Q9HBW1 PhosphoSite:Q9HBW1 DMDM:51701696
PaxDb:Q9HBW1 PRIDE:Q9HBW1 Ensembl:ENST00000249363 GeneID:64101
KEGG:hsa:64101 UCSC:uc003vmk.3 CTD:64101 GeneCards:GC07M127667
HGNC:HGNC:15586 MIM:610486 neXtProt:NX_Q9HBW1 PharmGKB:PA30463
InParanoid:Q9HBW1 KO:K16351 OMA:CGCEAVW OrthoDB:EOG4NGGM6
PhylomeDB:Q9HBW1 EvolutionaryTrace:Q9HBW1 GenomeRNAi:64101
NextBio:65940 ArrayExpress:Q9HBW1 Bgee:Q9HBW1 CleanEx:HS_LRRC4
Genevestigator:Q9HBW1 GermOnline:ENSG00000128594 InterPro:IPR026882
PANTHER:PTHR24369:SF9 Uniprot:Q9HBW1
Length = 653
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 59/220 (26%), Positives = 88/220 (40%)
Query: 139 GVPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
G+PS RYLNL NNI + F+ + +L+ L L N I I F L+ L L L
Sbjct: 72 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG-LENINPMM 256
N ++ + N I I F + L LE I+
Sbjct: 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGA 191
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L +L YL+LG GNHFP I SF L+ L +
Sbjct: 192 FEGLFNLKYLNLG--MCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWV 249
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
++++ + AF L +L+EL++++N L L F P+
Sbjct: 250 MNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289
Score = 137 (53.3 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 49/160 (30%), Positives = 74/160 (46%)
Query: 40 QVTIFLYLLHSSASV---MCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLK 96
QV I + ++AS CP +C C+ ++VC R ++ +P G + T L
Sbjct: 27 QVWILCAAIAAAASAGPQNCPSVCSCSNQFS---KVVCTRRGLSE-VPQG-IPSNTRYLN 81
Query: 97 IVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSL 156
++ EN + F+ HLE L + + I I F G+ SL L L N +T +
Sbjct: 82 LM---ENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVI 138
Query: 157 LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F+ + L+EL+L N IESIPS F + L L L
Sbjct: 139 PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178
>ZFIN|ZDB-GENE-040912-136 [details] [associations]
symbol:lingo1b "leucine rich repeat and Ig domain
containing 1b" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040912-136 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
MEROPS:I43.001 EMBL:CU468744 EMBL:BX470207 EMBL:BC081651
IPI:IPI00483520 RefSeq:NP_001004576.1 UniGene:Dr.12903 HSSP:P21793
ProteinModelPortal:Q66HV9 SMR:Q66HV9 IntAct:Q66HV9 STRING:Q66HV9
Ensembl:ENSDART00000052113 GeneID:447837 KEGG:dre:447837 CTD:447837
eggNOG:NOG278536 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
InParanoid:Q66HV9 OMA:NISTIEA OrthoDB:EOG40S0F8 NextBio:20832358
Bgee:Q66HV9 Uniprot:Q66HV9
Length = 622
Score = 165 (63.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 72/323 (22%), Positives = 122/323 (37%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHL-T 108
S ++ CP CEC+ +R +VC R + +P G + + T +L + + N L
Sbjct: 38 SGSATGCPSRCECSAQERS---VVCHRRKLIT-LPEG-IPIDTRLLDL-----SKNRLKA 87
Query: 109 IGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNL 167
I P F + LE+L + + I I F + LR L L +NN+ + F G+ NL
Sbjct: 88 INPEEFLNYPQLEDLQLNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQLGVFTGLSNL 147
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
L + NKI + +F L +L+ L + N + ++ R ++
Sbjct: 148 TRLDISENKIVILLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTS 207
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXX 287
+ E F + L T K R + I + L L L++
Sbjct: 208 VPTEAFSHLHNLLTLKLRHLNVNVIRDFSFRRLYRLKILEIANWPLLESLTAKSLHGLNI 267
Query: 288 XXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDR 347
+ + + L+ L N + V NL L + +L
Sbjct: 268 TTLSITNCNLTAVPYVAIQHLVYLRFFNLSFNPIEVVEGNKMHNLLRLQAFHLVGGRLVS 327
Query: 348 LEVASFDPIENSLRDLKISGNNI 370
+E SF + N LR L +S N++
Sbjct: 328 IEPYSFKGL-NYLRVLNVSSNSL 349
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 59/256 (23%), Positives = 105/256 (41%)
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKD 235
K+ ++P + + D R+L L+ NR+ + P N I I P F +
Sbjct: 63 KLITLPEGIPI---DTRLLDLSKNRLKAINPEEFLNYPQLEDLQLNENIISVIEPGAFSN 119
Query: 236 IQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGN 295
+ L+T R+ L+ I +++ L++L LD+ N+ N
Sbjct: 120 LLGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQELYNLKELEVGDN 179
Query: 296 HFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDP 355
I ++F L+ L ++R L V T AF++L NL+ L + + ++ + SF
Sbjct: 180 DLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLKLRHLNVNVIRDFSFRR 239
Query: 356 IENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLS 415
+ L+ L+I+ N I + N T +P + +L+F NLS
Sbjct: 240 LYR-LKILEIA-NWPLLESLTAKSLHGLNITTLSITNCNLTAVPYVAIQHLVYLRFFNLS 297
Query: 416 GNNLQDI-----HNLL 426
N ++ + HNLL
Sbjct: 298 FNPIEVVEGNKMHNLL 313
>UNIPROTKB|Q99983 [details] [associations]
symbol:OMD "Osteomodulin" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005796 "Golgi lumen"
evidence=TAS] [GO:0005975 "carbohydrate metabolic process"
evidence=TAS] [GO:0018146 "keratan sulfate biosynthetic process"
evidence=TAS] [GO:0030203 "glycosaminoglycan metabolic process"
evidence=TAS] [GO:0042339 "keratan sulfate metabolic process"
evidence=TAS] [GO:0042340 "keratan sulfate catabolic process"
evidence=TAS] [GO:0043202 "lysosomal lumen" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001611 PROSITE:PS51450
Reactome:REACT_116125 GO:GO:0005576 GO:GO:0005975 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0007155
GO:GO:0043202 GO:GO:0005796 EMBL:CH471089 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AL137848 GO:GO:0018146
GO:GO:0042340 HOGENOM:HOG000234447 HOVERGEN:HBG108061 CTD:4958
KO:K08124 OrthoDB:EOG415GDJ EMBL:AB000114 EMBL:AB009589
EMBL:AY358872 EMBL:BC046356 IPI:IPI00020990 RefSeq:NP_005005.1
UniGene:Hs.94070 ProteinModelPortal:Q99983 SMR:Q99983 STRING:Q99983
DMDM:20138850 PaxDb:Q99983 PRIDE:Q99983 Ensembl:ENST00000375550
GeneID:4958 KEGG:hsa:4958 UCSC:uc004asd.4 GeneCards:GC09M095176
HGNC:HGNC:8134 neXtProt:NX_Q99983 PharmGKB:PA31921
InParanoid:Q99983 OMA:FYIPRNL GenomeRNAi:4958 NextBio:19096
Bgee:Q99983 CleanEx:HS_OMD Genevestigator:Q99983
GermOnline:ENSG00000127083 Uniprot:Q99983
Length = 421
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 63/263 (23%), Positives = 111/263 (42%)
Query: 118 HLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSL-LDYN-FKGMMNLQELYLDFN 175
H+++L++ + I A+ + F L+ +NL+HN I S +DY F + NL +L+L+ N
Sbjct: 92 HIQQLYLQFNEIEAVTANSFINATHLKEINLSHNKIKSQKIDYGVFAKLPNLLQLHLEHN 151
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE--INPEIF 233
+E P F L L L +N ISKL YN + + + +IF
Sbjct: 152 NLEEFP---FPLPKSLERLLLGYNEISKLQTNAMDGLVNLTMLDLCYNYLHDSLLKDKIF 208
Query: 234 KDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXX 293
+++L S LE++ P + S L+YL L N
Sbjct: 209 AKMEKLMQLNLCSNRLESMPPGLPS---SLMYLSLENNSISSIPEKYFDKLPKLHTLRMS 265
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVA-- 351
N I F+ + L + N+L + AF NL L + N+++++ +
Sbjct: 266 HNKLQDIPYNIFNLP-NIVELSVGHNKLKQ----AFYIPRNLEHLYLQNNEIEKMNLTVM 320
Query: 352 --SFDPIE-NSLRDLKISGNNIQ 371
S DP+ + L +++ N ++
Sbjct: 321 CPSIDPLHYHHLTYIRVDQNKLK 343
Score = 114 (45.2 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 51/174 (29%), Positives = 75/174 (43%)
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL--DRLEVASFD 354
FP L KS L+ L L N ++K+ T A L NL LD+ YN L L+ F
Sbjct: 156 FPFPLPKS------LERLLLGYNEISKLQTNAMDGLVNLTMLDLCYNYLHDSLLKDKIFA 209
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+E L L + N ++ + + + + IP+ F P L L +
Sbjct: 210 KMEK-LMQLNLCSNRLESMPPGLPSSLMYLS----LENNSISSIPEKYFDKLPKLHTLRM 264
Query: 415 SGNNLQDI-HNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNI-HKAAKNS 466
S N LQDI +N+ NI L + NK K + YI P+N+ H +N+
Sbjct: 265 SHNKLQDIPYNIFNLPNI--VELSVGHNKLK---QAFYI---PRNLEHLYLQNN 310
Score = 94 (38.1 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 15/37 (40%), Positives = 31/37 (83%)
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
M++Q+LYL FN+IE++ ++ F++ + L+ ++L+HN+I
Sbjct: 91 MHIQQLYLQFNEIEAVTANSFINATHLKEINLSHNKI 127
>RGD|1560026 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1560026 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:DQ119102 IPI:IPI00197050 RefSeq:NP_001032413.1
UniGene:Rn.198672 ProteinModelPortal:Q45R42 SMR:Q45R42 PRIDE:Q45R42
Ensembl:ENSRNOT00000010673 GeneID:641521 KEGG:rno:641521
UCSC:RGD:1560026 InParanoid:Q45R42 NextBio:714703
Genevestigator:Q45R42 Uniprot:Q45R42
Length = 652
Score = 165 (63.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 59/220 (26%), Positives = 88/220 (40%)
Query: 139 GVPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
G+PS RYLNL NNI + F+ + +L+ L L N I I F L+ L L L
Sbjct: 71 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELF 130
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG-LENINPMM 256
N ++ + N I I F + L LE I+
Sbjct: 131 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGA 190
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L +L YL+LG GNHFP I SF L+ L +
Sbjct: 191 FEGLFNLKYLNLG--MCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWV 248
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
++++ + AF L +L+EL++++N L L F P+
Sbjct: 249 MNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 288
Score = 137 (53.3 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 49/160 (30%), Positives = 74/160 (46%)
Query: 40 QVTIFLYLLHSSASV---MCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLK 96
QV I + ++AS CP +C C+ ++VC R ++ +P G + T L
Sbjct: 26 QVWILCAAIAAAASAGPQNCPSVCSCSNQFS---KVVCTRRGLSE-VPQG-IPSNTRYLN 80
Query: 97 IVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSL 156
++ EN + F+ HLE L + + I I F G+ SL L L N +T +
Sbjct: 81 LM---ENNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVI 137
Query: 157 LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F+ + L+EL+L N IESIPS F + L L L
Sbjct: 138 PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 177
>UNIPROTKB|Q9GKN8 [details] [associations]
symbol:PRELP "Prolargin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027216
PROSITE:PS51450 GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000234447 HOVERGEN:HBG108061
EMBL:AF163568 IPI:IPI00710385 RefSeq:NP_776859.1 UniGene:Bt.3202
ProteinModelPortal:Q9GKN8 STRING:Q9GKN8 PRIDE:Q9GKN8 GeneID:282000
KEGG:bta:282000 CTD:5549 InParanoid:Q9GKN8 KO:K08125
OrthoDB:EOG44F69H NextBio:20805868 PANTHER:PTHR24371:SF15
Uniprot:Q9GKN8
Length = 381
Score = 128 (50.1 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 37/148 (25%), Positives = 70/148 (47%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L++ N+FI + F LR++NL +N I + + + +L LYL+ N++E +P
Sbjct: 106 LYLQNNFITELPVESFKNATGLRWINLDNNRIRKVDQRVLEKLPSLVFLYLEKNQLEEVP 165
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE--INPEIFKDIQEL 239
+++ +L LR L+ N+IS++ P +N + + P+ F+ ++ L
Sbjct: 166 AALPRNLEQLR---LSQNQISRIPPGVFSKLENLLLLDLQHNKLSDGVFKPDTFQGLKNL 222
Query: 240 KTFKCRSCGLENINPMMYSILADLIYLD 267
L + P + S + L YLD
Sbjct: 223 MQLNLAHNTLRKMPPKVPSAIHQL-YLD 249
Score = 116 (45.9 bits), Expect = 0.00072, P = 0.00072
Identities = 56/237 (23%), Positives = 96/237 (40%)
Query: 140 VPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+PS + YL L +N IT L +FK L+ + LD N+I + V L L L L
Sbjct: 99 IPSRIHYLYLQNNFITELPVESFKNATGLRWINLDNNRIRKVDQRVLEKLPSLVFLYLEK 158
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLEN--INPMM 256
N++ ++ P N I I P +F ++ L + L + P
Sbjct: 159 NQLEEV-P--AALPRNLEQLRLSQNQISRIPPGVFSKLENLLLLDLQHNKLSDGVFKPDT 215
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L +L+ L+L +N N I F L + L
Sbjct: 216 FQGLKNLMQLNLAHN---TLRKMPPKVPSAIHQLYLDSNRIEAIPSGYFKGFPNLAFIRL 272
Query: 317 KRNRLAK--VTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
N+L+ + +F N++NL+ L +S+N+ ++S I + L L ++ N+I+
Sbjct: 273 NYNQLSDRGLPKNSF-NISNLLVLHLSHNR-----ISSVPAISSRLEHLYLNNNSIE 323
Score = 77 (32.2 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 35/119 (29%), Positives = 50/119 (42%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL-DR-LEVASFDPIENSLRDLKISGNNIQ 371
L L NR+ + + F NL + ++YN+L DR L SF+ I N L L +S N I
Sbjct: 246 LYLDSNRIEAIPSGYFKGFPNLAFIRLNYNQLSDRGLPKNSFN-ISNLLV-LHLSHNRIS 303
Query: 372 XXXXXXXXXXXXXXXXXXIADMNYTDI-PKGLFKMN---------PHLQFLNLSGNNLQ 420
I +N T I P + + PHL++L L GN L+
Sbjct: 304 SVPAISSRLEHLYLNNNSIEKINGTQICPNNIVAFHDFSSDLEHVPHLRYLRLDGNYLK 362
>UNIPROTKB|I3LT68 [details] [associations]
symbol:LOC100620561 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050829 "defense response to Gram-negative
bacterium" evidence=IEA] [GO:0050707 "regulation of cytokine
secretion" evidence=IEA] [GO:0046696 "lipopolysaccharide receptor
complex" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0042116 "macrophage activation" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0001875 "lipopolysaccharide
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR027168 PROSITE:PS51450 InterPro:IPR000483 SMART:SM00082
GeneTree:ENSGT00700000104185 PANTHER:PTHR24365:SF9
Ensembl:ENSSSCT00000029553 Uniprot:I3LT68
Length = 653
Score = 109 (43.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 42/173 (24%), Positives = 73/173 (42%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+ ++ +F +L+ L + + L + + F +L NL LDISY + + F +
Sbjct: 412 ITMKSNFMGLEQLEYLDFQHSSLKQANDFSIFLSLRNLHYLDISYTNIHVVFRGIFAGLV 471
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
SL+ LK++GN+ Q ++ + + F P LQ LN+S N
Sbjct: 472 -SLQTLKMAGNSFQNNLLPDVFTDLTNLILLDLSKCQLEQVSQRAFHSLPRLQVLNMSHN 530
Query: 418 NLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIH--KAAKNSFA 468
L + L Y+ L LD S N E+ + P+++ KN F+
Sbjct: 531 RLLFLDTLPYKPLHSLRILDCSYNLIVASKEQE-LQHLPRSLAFLNLTKNDFS 582
Score = 104 (41.7 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
+Q +L L +T + I ++ F G+PSL+ L N+ SL D+ + L+EL +
Sbjct: 98 YQGLNYLSTLILTGNPIQSLALGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELNV 157
Query: 173 DFNKIESIP-SSVFMHLSDLRVLSLAHNRISKL 204
N I S F +L +L L L+ N+I +
Sbjct: 158 AHNHIHSFKLPEYFSNLPNLEHLDLSKNKIENI 190
Score = 97 (39.2 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 29/89 (32%), Positives = 42/89 (47%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F F L+ L ++ I I + G+ L L LT N I SL F G+ +LQ+L
Sbjct: 74 FSSFPELQVLDLSRCEIQTIDDDAYQGLNYLSTLILTGNPIQSLALGAFSGLPSLQKLVA 133
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
+ S+ HL L+ L++AHN I
Sbjct: 134 VETNLASLEDFPIGHLKTLKELNVAHNHI 162
Score = 88 (36.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 103 NP-NHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSL-LDYN 160
NP L +G F L++L + + ++ P + +L+ LN+ HN+I S L
Sbjct: 112 NPIQSLALGA-FSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELNVAHNHIHSFKLPEY 170
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
F + NL+ L L NKIE+I L + +L+L+
Sbjct: 171 FSNLPNLEHLDLSKNKIENIYHEHLQVLHQVPLLNLS 207
Score = 87 (35.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 32/148 (21%), Positives = 60/148 (40%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L ++ +++ + + F P L+ L+L+ I ++ D ++G+ L L L N I+S+
Sbjct: 59 LDLSFNYLSHLDSNSFSSFPELQVLDLSRCEIQTIDDDAYQGLNYLSTLILTGNPIQSLA 118
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN-PEIFKDIQELK 240
F L L+ L ++ L +N I PE F ++ L+
Sbjct: 119 LGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELNVAHNHIHSFKLPEYFSNLPNLE 178
Query: 241 TFKCRSCGLENINPMMYSILADLIYLDL 268
+ENI +L + L+L
Sbjct: 179 HLDLSKNKIENIYHEHLQVLHQVPLLNL 206
Score = 83 (34.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 407 PHLQFLNLSGNNLQD----IHNLLYQSNIKLTHLDLSRNK-------FKGFDEKSYIMSE 455
P+LQFL+LSGN+L HN KL HLDLS N+ F G ++ Y+ +
Sbjct: 373 PNLQFLDLSGNHLSFKGCCSHNEF--GTTKLKHLDLSFNEIITMKSNFMGLEQLEYLDFQ 430
Query: 456 PKNIHKAAKNSFALQSSMGKNAEY 479
++ +A N F++ S+ +N Y
Sbjct: 431 HSSLKQA--NDFSIFLSL-RNLHY 451
>UNIPROTKB|E1BV71 [details] [associations]
symbol:ECM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005614 "interstitial matrix" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0010811 "positive regulation of
cell-substrate adhesion" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0070052 "collagen V binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR001007 Pfam:PF00093
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51450 SMART:SM00214
GO:GO:0030198 GO:GO:0008201 GO:GO:0010811
GeneTree:ENSGT00700000104006 GO:GO:0005614 CTD:1842 KO:K08119
OMA:AVWSPKP EMBL:AADN02013900 IPI:IPI00573040 RefSeq:XP_414297.2
UniGene:Gga.53618 Ensembl:ENSGALT00000007480 GeneID:415953
KEGG:gga:415953 Uniprot:E1BV71
Length = 704
Score = 165 (63.1 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 80/313 (25%), Positives = 125/313 (39%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES--IPSSVFMHLSDLRVLSLAH 198
P L L+LT N IT++ + F G+ NL+ + L N I S I F L L+ L L
Sbjct: 335 PDLTSLDLTGNIITTISNEAFNGIPNLEWIDLSKNNISSSGIGPHAFKTLKKLKRLYLDG 394
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE--NINPMM 256
N + + N + I+ + + ++ L T + L N++P+
Sbjct: 395 NMLVHIPSELPSTLEEIKIND---NQLHAIDEDALQGLKNLVTLELEGNKLSEANVSPLA 451
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L L YL LG N+ N + E F+ K+ V+ L
Sbjct: 452 FYPLKSLSYLRLGRNKFRIIPQGLPTTLEELYLE---NNQIEEVSEICFNHTRKINVIVL 508
Query: 317 KRNRLA--KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXX 374
K N+L ++ A+ N NL +D+SYNKL V S+ P SL L + GN I+
Sbjct: 509 KHNKLEEHRIAPLAWINQENLESIDLSYNKL--YHVPSYLP--KSLLHLILIGNQIERIP 564
Query: 375 XXXXXXXXXXXXXXXIADMNYTDI---PKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNI 431
++ TD P F L+ L L N+L+ + + +
Sbjct: 565 GYVFGHMKPGLEYLYLSFNKLTDDGIDPVSFFGAYHSLRELFLDHNDLKSVPFGIEEMR- 623
Query: 432 KLTHLDLSRNKFK 444
KL L L+ NK +
Sbjct: 624 KLRFLRLNNNKIR 636
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 165 (63.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 45/141 (31%), Positives = 72/141 (51%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQ 115
CP C C+ + R ++C R ++A +P + + T L + +EN + F+
Sbjct: 57 CPAACSCS-NQASR--VICTRRELAE-VP-ASIPVNTRYLNL---QENGIQVIRTDTFKH 108
Query: 116 FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN 175
+HLE L ++ + + I F G+PSL L L N +T++ F+ + L+EL+L N
Sbjct: 109 LRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNN 168
Query: 176 KIESIPSSVFMHLSDLRVLSL 196
IESIPS F + LR L L
Sbjct: 169 PIESIPSYAFNRVPSLRRLDL 189
Score = 150 (57.9 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 57/219 (26%), Positives = 85/219 (38%)
Query: 140 VP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+P + RYLNL N I + FK + +L+ L L N + I F L L L L
Sbjct: 84 IPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD 143
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCG-LENINPMMY 257
NR++ + + N I I F + L+ LE I+ +
Sbjct: 144 NRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAF 203
Query: 258 SILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLK 317
L +L YL+LG GN +I SF L+ L L
Sbjct: 204 EGLVNLRYLNLG--MCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM 261
Query: 318 RNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPI 356
++A + AF +L +L EL++S+N L L F P+
Sbjct: 262 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL 300
>UNIPROTKB|O94991 [details] [associations]
symbol:SLITRK5 "SLIT and NTRK-like protein 5" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471085
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 eggNOG:NOG147171 EMBL:AB020725 EMBL:AK024251
EMBL:AL603883 EMBL:BC098106 EMBL:BC103509 IPI:IPI00016679
RefSeq:NP_056382.1 UniGene:Hs.591208 ProteinModelPortal:O94991
SMR:O94991 STRING:O94991 PhosphoSite:O94991 PaxDb:O94991
PRIDE:O94991 Ensembl:ENST00000325089 GeneID:26050 KEGG:hsa:26050
UCSC:uc001vln.3 CTD:26050 GeneCards:GC13P088324 HGNC:HGNC:20295
HPA:HPA013843 MIM:609680 neXtProt:NX_O94991 PharmGKB:PA134885524
InParanoid:O94991 OMA:HHRGPAL OrthoDB:EOG4X97GH PhylomeDB:O94991
GenomeRNAi:26050 NextBio:47908 ArrayExpress:O94991 Bgee:O94991
CleanEx:HS_SLITRK5 Genevestigator:O94991 GermOnline:ENSG00000165300
Uniprot:O94991
Length = 958
Score = 118 (46.6 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 47/158 (29%), Positives = 72/158 (45%)
Query: 55 MCPYMCECALDDRGRYEIVCR-RG-----DMANP-IPIGQMDLGTEVL-KIVPSEENPNH 106
+C C C D G + C RG +++ P PI + L +L ++ P+E
Sbjct: 47 ICDNACPCEEKD-GILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNE----- 100
Query: 107 LTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
F + LH+ ++ I I F G+ LR L+L +N + L D F G+ N
Sbjct: 101 ------FVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLEN 154
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L+ L +D+N I I + F L L+VL L N +S L
Sbjct: 155 LEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSL 192
Score = 106 (42.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNL-QELY 171
F + L LH+ N+ + + F G+ +L YL + +N I S+++ N G ++L Q L
Sbjct: 125 FHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI-SVIEPNAFGKLHLLQVLI 183
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L+ N + S+P+++F + L L L NR+ KL P
Sbjct: 184 LNDNLLSSLPNNLFRFVP-LTHLDLRGNRL-KLLP 216
Score = 98 (39.6 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L N +A V T F T L L + N++ ++ +F + N LR L ++GN I+
Sbjct: 416 LTENYIAVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLTN-LRRLYLNGNRIERLSP 474
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
++ +I G F P+LQ L L+ N LQ + + ++ S + L
Sbjct: 475 ELFYGLQSLQYLFLQYNL-IREIQSGTFDPVPNLQLLFLNNNLLQAMPSGVF-SGLTLLR 532
Query: 436 LDLSRNKF 443
L+L N F
Sbjct: 533 LNLRSNHF 540
Score = 91 (37.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I +++F L+ L L NR+ +++ F L +L L + YN + ++ +FD
Sbjct: 443 NRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGTFD 502
Query: 355 PIENSLRDLKISGNNIQ 371
P+ N L+ L ++ N +Q
Sbjct: 503 PVPN-LQLLFLNNNLLQ 518
Score = 83 (34.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N+ V+ F L +L L NR++ + AF +LTNL L ++ N+++RL F
Sbjct: 419 NYIAVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFY 478
Query: 355 PIENSLRDLKISGNNIQ 371
++ SL+ L + N I+
Sbjct: 479 GLQ-SLQYLFLQYNLIR 494
Score = 83 (34.3 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L N I + F G+ L+ L+L+ NK+E + F+ L +L L + +N IS +
Sbjct: 110 LHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIE 169
Query: 206 P 206
P
Sbjct: 170 P 170
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 160 (61.4 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 60/245 (24%), Positives = 104/245 (42%)
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
N+F P + + F +P+L L+L H I + F+G+ L LYL N I + + F
Sbjct: 61 NNF-PVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAF 119
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND-IVEINPEIFKDIQELKTFKC 244
L++L L L HN++++L PR N+ I E+ F+ ++L+
Sbjct: 120 DDLTELTYLYLDHNKVTEL-PRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYL 178
Query: 245 RSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKS 304
L ++ P + +L + NQ N I + +
Sbjct: 179 SENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNA 238
Query: 305 FSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
F S + L+ L L L K + AF +T L + + N+L++L ++F P + SL L
Sbjct: 239 FQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQLP-SNF-PFD-SLETL 295
Query: 364 KISGN 368
++ N
Sbjct: 296 ALTNN 300
Score = 152 (58.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 51/206 (24%), Positives = 89/206 (43%)
Query: 37 MLFQVTIFLYLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLK 96
+L + + LL + A+ CP C C D + ++C + + IP ++ T++L
Sbjct: 6 LLLSLGLLAGLLPALAA--CPQNCHCHSDLQ---HVICDKVGLQK-IP--KVSEKTKLLN 57
Query: 97 IVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSL 156
+ + N + F+ +L LH+ + I + F G+ L YL L+HN+I L
Sbjct: 58 L---QRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVL 114
Query: 157 LDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXX 216
F + L LYLD NK+ +P + L +L +L L +N+I +L
Sbjct: 115 RAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLR 174
Query: 217 XXXXXYNDIVEINPEIFKDIQELKTF 242
N + + P D++ L F
Sbjct: 175 WLYLSENALSSLQPGALDDVENLAKF 200
>FB|FBgn0039332 [details] [associations]
symbol:alrm "astrocytic leucine-rich repeat molecule"
species:7227 "Drosophila melanogaster" [GO:0016942 "insulin-like
growth factor binding protein complex" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014297 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
EMBL:AY070512 RefSeq:NP_651393.1 UniGene:Dm.33515 SMR:Q9VBR3
EnsemblMetazoa:FBtr0084846 GeneID:43074 KEGG:dme:Dmel_CG11910
UCSC:CG11910-RA CTD:43074 FlyBase:FBgn0039332 InParanoid:Q9VBR3
OMA:MEDITAP OrthoDB:EOG4GTHV5 GenomeRNAi:43074 NextBio:832087
Uniprot:Q9VBR3
Length = 471
Score = 162 (62.1 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 67/322 (20%), Positives = 126/322 (39%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L NS I I F P L+ L + + ++ + F+G NL L+L +N+++ IP
Sbjct: 70 LTFLNSSIAKIPHLLFDTFPDLQVLRMENCSLETFEKPQFEGASNLMSLFLGYNRLKDIP 129
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKT 241
++F+ +L L L N++ +L N + +I+ +F +++L
Sbjct: 130 KNIFLGADNLATLHLQGNQLKQLGNHSFHALKEVKELSLAENQLEQISLGVFSGMRKLMD 189
Query: 242 FKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVIL 301
L+ + ++ +L L+L N+ GN F L
Sbjct: 190 LNLAGNRLDALPRGVFDRNLNLTKLNLARNRFTAFESELLKLQPVFTQLDISGNIFQE-L 248
Query: 302 EKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLR 361
+F+ L V L ++T + ELD+ N L + P+ ++
Sbjct: 249 TLNFTM---LDVAIAHSCDLRRLTVYGVIH-----ELDLHNNSLREMPHI---PLAANVS 297
Query: 362 DLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQD 421
L +S N + A + ++P+GLFK HLQ L++SGN++
Sbjct: 298 SLDLSHNPLGNLQGNPLRRFTSLLRLNLSATGAH-ELPEGLFKKQSHLQMLDISGNSIYS 356
Query: 422 IHNLLYQSNIKLTHLDLSRNKF 443
+ ++ S L + +N +
Sbjct: 357 LKITIFDSLKALQYFYFQQNNW 378
Score = 129 (50.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 38/139 (27%), Positives = 62/139 (44%)
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
LQVL ++ L F +NL+ L + YN+L + F +N L L + GN +
Sbjct: 91 LQVLRMENCSLETFEKPQFEGASNLMSLFLGYNRLKDIPKNIFLGADN-LATLHLQGNQL 149
Query: 371 QXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSN 430
+ +A+ I G+F L LNL+GN L + ++ N
Sbjct: 150 KQLGNHSFHALKEVKELS-LAENQLEQISLGVFSGMRKLMDLNLAGNRLDALPRGVFDRN 208
Query: 431 IKLTHLDLSRNKFKGFDEK 449
+ LT L+L+RN+F F+ +
Sbjct: 209 LNLTKLNLARNRFTAFESE 227
>RGD|1302973 [details] [associations]
symbol:Rxfp1 "relaxin/insulin-like family peptide receptor 1"
species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA;ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IEA;ISO]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IMP] [GO:0007567 "parturition"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA;ISO] [GO:0030198
"extracellular matrix organization" evidence=IEA;ISO] [GO:0042562
"hormone binding" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060427 "lung connective tissue development"
evidence=IEA;ISO] [GO:0060658 "nipple morphogenesis"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 RGD:1302973 GO:GO:0016021 GO:GO:0005886 GO:GO:0030154
GO:GO:0046872 GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
HSSP:P01130 GO:GO:0060427 CTD:59350 HOVERGEN:HBG026354 KO:K04306
GO:GO:0060658 HOGENOM:HOG000049056 OrthoDB:EOG4NGGM1 EMBL:AY509976
IPI:IPI00409992 RefSeq:NP_958820.1 UniGene:Rn.109230
ProteinModelPortal:Q6R6I6 SMR:Q6R6I6 STRING:Q6R6I6
PhosphoSite:Q6R6I6 PRIDE:Q6R6I6 GeneID:295144 KEGG:rno:295144
UCSC:RGD:1302973 InParanoid:Q6R6I6 NextBio:639021
Genevestigator:Q6R6I6 Uniprot:Q6R6I6
Length = 758
Score = 165 (63.1 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 61/230 (26%), Positives = 97/230 (42%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
++L N I +L +F+ +LQ+L L NKI S+ S F L L L L+HNRI+ L
Sbjct: 131 MSLQWNFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNRITFLK 190
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI-NPMMYSILADLI 264
P N + I+P F + L + L + + + + L
Sbjct: 191 PGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLH 250
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
+LD N+ N + E +F+ KL L L N++ +
Sbjct: 251 WLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNEHAFTHLQKLDELDLGSNKIENL 310
Query: 325 TTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG---NNIQ 371
F +L L +L+ISYN + ++EV FD + L+ L + G +NIQ
Sbjct: 311 PPNIFKDLKELSQLNISYNPIQKIEVNQFDYLAK-LKSLSLEGIEISNIQ 359
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 54/207 (26%), Positives = 88/207 (42%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ + L +N I ++P + F DL+ L L +N+I ++ +N I
Sbjct: 127 NVTVMSLQWNFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNRI 186
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ P +F+D+ L+ L I+P+ + L LI L L N
Sbjct: 187 TFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHM 246
Query: 286 XXXX-XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
GN + +F S L VL +++N++ + AFT+L L ELD+ NK
Sbjct: 247 PRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNEHAFTHLQKLDELDLGSNK 306
Query: 345 LDRLEVASFDPIENSLRDLKISGNNIQ 371
++ L F ++ L L IS N IQ
Sbjct: 307 IENLPPNIFKDLKE-LSQLNISYNPIQ 332
Score = 139 (54.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + SF LQ LCL+ N++ V+ +AF L +L +L +S+N++ L+ F+
Sbjct: 136 NFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNRITFLKPGVFE 195
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIP-KGLFKMNPHLQFLN 413
+ L L I N++ + + T +P K L + P L +L+
Sbjct: 196 DLHR-LEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNA-LTRLPDKPLCQHMPRLHWLD 253
Query: 414 LSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
GN + ++ NL + S LT L + +NK +E ++
Sbjct: 254 FEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNEHAF 291
Score = 138 (53.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 45/165 (27%), Positives = 68/165 (41%)
Query: 105 NHLT-IGPI-FQQFQHLEELHITNSFIPAIGFHPFWG-VPSLRYLNLTHNNITSLLDYNF 161
NHL+ I P+ F L L + N+ + + P +P L +L+ N I +L + F
Sbjct: 208 NHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTF 267
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
NL L + NKI + F HL L L L N+I L P
Sbjct: 268 ISCNNLTVLVMRKNKINHLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNIS 327
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
YN I +I F + +LK+ + NI M+ L +L ++
Sbjct: 328 YNPIQKIEVNQFDYLAKLKSLSLEGIEISNIQQRMFRPLINLSHI 372
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 54/230 (23%), Positives = 91/230 (39%)
Query: 108 TIGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
T+ P F+++ L++L + N+ I ++ F G+ SL L L+HN IT L F+ +
Sbjct: 140 TLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNRITFLKPGVFEDLHR 199
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY-NDI 225
L+ L ++ N + I F L+ L +L L +N +++L + N I
Sbjct: 200 LEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRI 259
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ F L R + ++N ++ L L LDLG N+
Sbjct: 260 HNLRNLTFISCNNLTVLVMRKNKINHLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLK 319
Query: 286 XXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNL 335
N I F KL+ L L+ ++ + F L NL
Sbjct: 320 ELSQLNISYNPIQKIEVNQFDYLAKLKSLSLEGIEISNIQQRMFRPLINL 369
Score = 45 (20.9 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDI 32
+ L L LS+N I + P +F+D+
Sbjct: 173 LHSLTKLYLSHNRITFLKPGVFEDL 197
>UNIPROTKB|Q9H5Y7 [details] [associations]
symbol:SLITRK6 "SLIT and NTRK-like protein 6" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 EMBL:CH471093
HOGENOM:HOG000290667 HOVERGEN:HBG056407 EMBL:AK021931 EMBL:AK026427
EMBL:AK292793 EMBL:AL137517 EMBL:BX648640 EMBL:AL162373
EMBL:BC101070 EMBL:BC101071 EMBL:BC101072 EMBL:BC101073
IPI:IPI00176398 PIR:T46279 RefSeq:NP_115605.2 UniGene:Hs.525105
ProteinModelPortal:Q9H5Y7 SMR:Q9H5Y7 STRING:Q9H5Y7
PhosphoSite:Q9H5Y7 DMDM:59803110 PaxDb:Q9H5Y7 PRIDE:Q9H5Y7
DNASU:84189 Ensembl:ENST00000400286 GeneID:84189 KEGG:hsa:84189
UCSC:uc001vll.1 CTD:84189 GeneCards:GC13M086366 HGNC:HGNC:23503
HPA:HPA014491 MIM:609681 neXtProt:NX_Q9H5Y7 PharmGKB:PA134928433
eggNOG:NOG113965 InParanoid:Q9H5Y7 OMA:YFELKAN OrthoDB:EOG4X0MRT
PhylomeDB:Q9H5Y7 GenomeRNAi:84189 NextBio:73578 Bgee:Q9H5Y7
CleanEx:HS_SLITRK6 Genevestigator:Q9H5Y7 GermOnline:ENSG00000184564
Uniprot:Q9H5Y7
Length = 841
Score = 131 (51.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 53/187 (28%), Positives = 86/187 (45%)
Query: 32 IQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRGRY-EIVCRRGDMA-NPIPIGQMD 89
I D+ M + T L L + A + PY+ + + G Y I C ++ + + I +
Sbjct: 291 INDSRMSTKTTSILKL-PTKAPGLIPYITKPSTQLPGPYCPIPCNCKVLSPSGLLIHCQE 349
Query: 90 LGTEVLK-IVPSEENPNHLTI-GPIFQ--------QFQHLEELHITNSFIPAIGFHPFWG 139
E L + P +NP L + G I ++ LE LH+ N+ I + F
Sbjct: 350 RNIESLSDLRPPPQNPRKLILAGNIIHSLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFMN 409
Query: 140 VPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
+ L+ L L N++T L F G+ NL+ LYL++N I+ I F + L+VL L +N
Sbjct: 410 LTRLQKLYLNGNHLTKLSKGMFLGLHNLEYLYLEYNAIKEILPGTFNPMPKLKVLYLNNN 469
Query: 200 RISKLAP 206
+ L P
Sbjct: 470 LLQVLPP 476
Score = 122 (48.0 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 37/133 (27%), Positives = 56/133 (42%)
Query: 141 PSLRY-LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHN 199
PS + L+L +N +T L +F G+ N ++L FN I I F L L+ L + HN
Sbjct: 63 PSRPFQLSLLNNGLTMLHTNDFSGLTNAISIHLGFNNIADIEIGAFNGLGLLKQLHINHN 122
Query: 200 RISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSI 259
+ L N I I P F + LK +E++ P ++
Sbjct: 123 SLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRF 182
Query: 260 LADLIYLDLGYNQ 272
+ L +LDL NQ
Sbjct: 183 VP-LTHLDLRGNQ 194
Score = 111 (44.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 30/85 (35%), Positives = 44/85 (51%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
+H+ + I I F G+ L+ L++ HN++ L + F G+ NL+ L D N I I
Sbjct: 93 IHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIE 152
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAP 206
S F L+ L+VL L N I L P
Sbjct: 153 PSAFSKLNRLKVLILNDNAIESLPP 177
Score = 99 (39.9 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 92 TEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN 151
T + I N + IG F L++LHI ++ + + F G+ +L +L +N
Sbjct: 88 TNAISIHLGFNNIADIEIGA-FNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNN 146
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
IT + F + L+ L L+ N IES+P ++F + L L L N++ L
Sbjct: 147 FITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTL 198
Score = 92 (37.4 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N V+ E SF + +LQ L L N L K++ F L NL L + YN + + +F+
Sbjct: 397 NRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGLHNLEYLYLEYNAIKEILPGTFN 456
Query: 355 PIENSLRDLKISGNNIQ 371
P+ L+ L ++ N +Q
Sbjct: 457 PMPK-LKVLYLNNNLLQ 472
Score = 81 (33.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 83 IPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPS 142
I IG + G +LK + N + F ++LE L N+FI I F +
Sbjct: 103 IEIGAFN-GLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNR 161
Query: 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFM-HLSDLRVLSLAHNR 200
L+ L L N I SL F+ + L L L N+++++P F+ H+ + L L N+
Sbjct: 162 LKVLILNDNAIESLPPNIFR-FVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 219
Score = 67 (28.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 31/131 (23%), Positives = 55/131 (41%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXX 373
L L N + + + L L + N+++ LE SF + L+ L ++GN++
Sbjct: 368 LILAGNIIHSLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFMNLTR-LQKLYLNGNHL--T 424
Query: 374 XXXXXXXXXXXXXXXXIADMN-YTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIK 432
+ N +I G F P L+ L L+ N LQ + ++ S +
Sbjct: 425 KLSKGMFLGLHNLEYLYLEYNAIKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIF-SGVP 483
Query: 433 LTHLDLSRNKF 443
LT ++L N+F
Sbjct: 484 LTKVNLKTNQF 494
Score = 51 (23.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/116 (21%), Positives = 43/116 (37%)
Query: 252 INPMMYSILADLIYLD---LGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
I+ +M S L + L+ LG N+ GNH + + F
Sbjct: 375 IHSLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGL 434
Query: 309 FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLK 364
L+ L L+ N + ++ F + L L ++ N L L F + + +LK
Sbjct: 435 HNLEYLYLEYNAIKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVPLTKVNLK 490
Score = 45 (20.9 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
+ +G F LQ L L+GN+L + ++ L +L L N K
Sbjct: 402 LEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGLHNLEYLYLEYNAIK 448
Score = 40 (19.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFK 30
+++LK L L+ N I + P IF+
Sbjct: 159 LNRLKVLILNDNAIESLPPNIFR 181
>UNIPROTKB|B4DHD1 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
EMBL:AC107219 UniGene:Hs.591686 HGNC:HGNC:19718 HOVERGEN:HBG026354
HOGENOM:HOG000049056 EMBL:AC019341 EMBL:AC107056 EMBL:AC108017
EMBL:AC121161 EMBL:AC125489 EMBL:AK295040 IPI:IPI00910652
SMR:B4DHD1 STRING:B4DHD1 Ensembl:ENST00000448688 UCSC:uc010iql.3
Uniprot:B4DHD1
Length = 652
Score = 164 (62.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 45/160 (28%), Positives = 79/160 (49%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + L++L++ N+ I +I + F G+ SL L L+HN IT L F+ + L+ L +
Sbjct: 65 FKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLII 124
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXX-XXXXYNDIVEINPE 231
+ N + I F L+ L +L L +N +++L + N I +N
Sbjct: 125 EDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLVMRKNKINHLNEN 184
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
F +Q+L S +EN+ P+++ L +L L+L YN
Sbjct: 185 TFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYN 224
Score = 143 (55.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 50/210 (23%), Positives = 87/210 (41%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ + L +N I +P F + DL+ L L +N+I+ ++ +N I
Sbjct: 46 NVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRI 105
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ P +F+D+ L+ L I+P + L LI L L N
Sbjct: 106 TFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHM 165
Query: 286 XXXX-XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
N + E +F+ KL L L N++ + F +L L +L++SYN
Sbjct: 166 PRLHWLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNP 225
Query: 345 LDRLEVASFDPIENSLRDLKISG---NNIQ 371
+ +++ FD + L+ L + G +NIQ
Sbjct: 226 IQKIQANQFDYLVK-LKSLSLEGIEISNIQ 254
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 46/165 (27%), Positives = 71/165 (43%)
Query: 105 NHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF- 161
N +T + P +F+ LE L I ++ + I F+G+ SL L L +N +T L D
Sbjct: 103 NRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLC 162
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
+ M L L + NKI + + F L L L L N+I L P
Sbjct: 163 QHMPRLHWLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLS 222
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
YN I +I F + +LK+ + NI M+ L +L ++
Sbjct: 223 YNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHI 267
Score = 120 (47.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 41/150 (27%), Positives = 64/150 (42%)
Query: 105 NHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWG-VPSLRYLNLTHNNITSLLDYNF 161
NHL+ I P F L L + N+ + + P +P L +L + N I L + F
Sbjct: 127 NHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLVMRKNKINHLNENTF 186
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
+ L EL L NKIE++P +F L +L L+L++N I K+
Sbjct: 187 APLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLE 246
Query: 222 YNDIVEINPEIFKDIQELKTF---KCRSCG 248
+I I +F+ + L K + CG
Sbjct: 247 GIEISNIQQRMFRPLMNLSHIYFKKFQYCG 276
Score = 47 (21.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDI 32
++ L L LS+N I + P +F+D+
Sbjct: 92 LNSLTKLYLSHNRITFLKPGVFEDL 116
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 163 (62.4 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 83/390 (21%), Positives = 150/390 (38%)
Query: 56 CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQ 115
CP C+C + D + C G +A+ I ++ L T + I+ + L F
Sbjct: 21 CPKTCKCVVRDA----VQCSGGSVAH---IAELGLPTNLTHILLFRMDRGVLQ-SHSFSG 72
Query: 116 FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFN 175
L+ L +++S I AI F + L+ L LT N I+ L M+ L++L+LD N
Sbjct: 73 MTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHN 132
Query: 176 KIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKD 235
+ + ++F L +LR L L N++S L N++ + P+
Sbjct: 133 ALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHL-PQGLLG 191
Query: 236 IQ-ELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
Q +L+ S L +++ + + L L L L N G
Sbjct: 192 AQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSG 251
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + F L L L N L ++ F + L EL ++ L L A+F
Sbjct: 252 NLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFR 311
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNL 414
+ + L+ L ++ N + + ++P+ + L+ ++L
Sbjct: 312 NL-SGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRLRQVSL 370
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
N L+ + L+++ L + L N+ K
Sbjct: 371 RHNRLRALPRTLFRNLSSLVTVQLEHNQLK 400
Score = 150 (57.9 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 75/342 (21%), Positives = 134/342 (39%)
Query: 105 NHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN-F 161
+H++ I P F L+ L +T + I + + L L L HN + L D N F
Sbjct: 84 SHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALRDL-DQNLF 142
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
+ ++NL++L L+ N++ +P+++F L L+VL L+ N ++ L P+
Sbjct: 143 QKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHL-PQGLLGAQIKLEKLLL 201
Query: 222 Y-NDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXX 280
Y N ++ ++ + ++ L + L +I P + L +L L L N
Sbjct: 202 YSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPAL 261
Query: 281 XXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDI 340
N + E F L+ L L L + AF NL+ L L +
Sbjct: 262 FLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGL 321
Query: 341 SYNKL-DRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIP 399
+ N L L F + LR L + N ++ + +P
Sbjct: 322 TRNPLLSALPPGMFHGL-TELRVLAVHTNALEELPEDALRGLGRLRQVS-LRHNRLRALP 379
Query: 400 KGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+ LF+ L + L N L+ + ++ + +LT + L N
Sbjct: 380 RTLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLTRVLLGHN 421
Score = 38 (18.4 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDI 32
M+ L+ L LS + I I+P F D+
Sbjct: 73 MTVLQRLMLSDSHISAIDPGTFNDL 97
>UNIPROTKB|F1MX63 [details] [associations]
symbol:PRELP "Prolargin" species:9913 "Bos taurus"
[GO:0007569 "cell aging" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450 GO:GO:0031012
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0007569
GeneTree:ENSGT00600000084286 IPI:IPI00710385 UniGene:Bt.3202
PANTHER:PTHR24371:SF15 OMA:NKLEHLY EMBL:DAAA02041895
Ensembl:ENSBTAT00000023709 Uniprot:F1MX63
Length = 381
Score = 126 (49.4 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L++ N+FI + F LR++NL +N I + + + +L LY++ N++E +P
Sbjct: 106 LYLQNNFITELPVESFKNATGLRWINLDNNRIRKVDQRVLEKLPSLVFLYMEKNQLEEVP 165
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE--INPEIFKDIQEL 239
+++ +L LR L+ N+IS++ P +N + + P+ F+ ++ L
Sbjct: 166 AALPRNLEQLR---LSQNQISRIPPGVFSKLENLLLLDLQHNKLSDGVFKPDTFQGLKNL 222
Query: 240 KTFKCRSCGLENINPMMYSILADLIYLD 267
L + P + S + L YLD
Sbjct: 223 MQLNLAHNTLRKMPPKVPSAIHQL-YLD 249
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 56/237 (23%), Positives = 97/237 (40%)
Query: 140 VPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+PS + YL L +N IT L +FK L+ + LD N+I + V L L L +
Sbjct: 99 IPSRIHYLYLQNNFITELPVESFKNATGLRWINLDNNRIRKVDQRVLEKLPSLVFLYMEK 158
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLEN--INPMM 256
N++ ++ P N I I P +F ++ L + L + P
Sbjct: 159 NQLEEV-P--AALPRNLEQLRLSQNQISRIPPGVFSKLENLLLLDLQHNKLSDGVFKPDT 215
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L +L+ L+L +N N I F S L + L
Sbjct: 216 FQGLKNLMQLNLAHN---TLRKMPPKVPSAIHQLYLDSNRIEAIPSGYFKSFPNLAFIRL 272
Query: 317 KRNRLAK--VTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
N+L+ + +F N++NL+ L +S+N+ ++S I + L L ++ N+I+
Sbjct: 273 NYNQLSDRGLPKNSF-NISNLLVLHLSHNR-----ISSVPAISSRLEHLYLNNNSIE 323
Score = 78 (32.5 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 35/119 (29%), Positives = 51/119 (42%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL-DR-LEVASFDPIENSLRDLKISGNNIQ 371
L L NR+ + + F + NL + ++YN+L DR L SF+ I N L L +S N I
Sbjct: 246 LYLDSNRIEAIPSGYFKSFPNLAFIRLNYNQLSDRGLPKNSFN-ISNLLV-LHLSHNRIS 303
Query: 372 XXXXXXXXXXXXXXXXXXIADMNYTDI-PKGLFKMN---------PHLQFLNLSGNNLQ 420
I +N T I P + + PHL++L L GN L+
Sbjct: 304 SVPAISSRLEHLYLNNNSIEKINGTQICPNNIVAFHDFSSDLEHVPHLRYLRLDGNYLK 362
>UNIPROTKB|F1PE17 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060658 "nipple morphogenesis" evidence=IEA]
[GO:0060427 "lung connective tissue development" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50262
PROSITE:PS51450 GO:GO:0016021 GO:GO:0030154 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
GO:GO:0007188 GO:GO:0007567 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0060427 OMA:YTLTTRP GO:GO:0060658
GeneTree:ENSGT00650000093266 EMBL:AAEX03010082 EMBL:AAEX03010083
ProteinModelPortal:F1PE17 Ensembl:ENSCAFT00000013759 Uniprot:F1PE17
Length = 696
Score = 164 (62.8 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 61/230 (26%), Positives = 95/230 (41%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
++L N I L F+ NLQ+L L NKI SIP F L L L L+HNRI+ L
Sbjct: 69 MSLRWNLIRKLPPDGFRKYHNLQKLCLQNNKIRSIPIYAFRGLHSLTKLYLSHNRITFLK 128
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI-NPMMYSILADLI 264
P N + I+P F + L + L ++ + + + L
Sbjct: 129 PGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLALMNNVLTHLPDKPLCQYMPRLH 188
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
+LDL N N + E +F+ KL L L N++ +
Sbjct: 189 WLDLEDNHIHNLRNLTFISCGNLTVLVMRKNKINHLNENTFAPLQKLAELDLGSNKIENL 248
Query: 325 TTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG---NNIQ 371
F +L L +L++SYN + +++ FD + L+ L + G +NIQ
Sbjct: 249 PPQVFKDLKELSQLNLSYNPIQKIQADQFDYLVK-LKSLSLEGIEISNIQ 297
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 50/207 (24%), Positives = 82/207 (39%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ + L +N I +P F +L+ L L +N+I + +N I
Sbjct: 65 NVTLMSLRWNLIRKLPPDGFRKYHNLQKLCLQNNKIRSIPIYAFRGLHSLTKLYLSHNRI 124
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ P +F+D+ L+ L I+P+ + L LI L L N
Sbjct: 125 TFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLALMNNVLTHLPDKPLCQYM 184
Query: 286 XXXX-XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
NH + +F S L VL +++N++ + F L L ELD+ NK
Sbjct: 185 PRLHWLDLEDNHIHNLRNLTFISCGNLTVLVMRKNKINHLNENTFAPLQKLAELDLGSNK 244
Query: 345 LDRLEVASFDPIENSLRDLKISGNNIQ 371
++ L F ++ L L +S N IQ
Sbjct: 245 IENLPPQVFKDLKE-LSQLNLSYNPIQ 270
Score = 140 (54.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 45/165 (27%), Positives = 72/165 (43%)
Query: 105 NHLT-IGPI-FQQFQHLEELHITNSFIPAIGFHPFWG-VPSLRYLNLTHNNITSLLDYNF 161
NHL+ I P+ F L L + N+ + + P +P L +L+L N+I +L + F
Sbjct: 146 NHLSRISPLTFYGLNSLILLALMNNVLTHLPDKPLCQYMPRLHWLDLEDNHIHNLRNLTF 205
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
NL L + NKI + + F L L L L N+I L P+
Sbjct: 206 ISCGNLTVLVMRKNKINHLNENTFAPLQKLAELDLGSNKIENLPPQVFKDLKELSQLNLS 265
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
YN I +I + F + +LK+ + NI M+ L +L ++
Sbjct: 266 YNPIQKIQADQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHI 310
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 50/197 (25%), Positives = 82/197 (41%)
Query: 73 VCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAI 132
+C + + IPI + K+ S L G +F+ LE L I ++ + I
Sbjct: 93 LCLQNNKIRSIPIYAFRGLHSLTKLYLSHNRITFLKPG-VFEDLHRLEWLIIEDNHLSRI 151
Query: 133 GFHPFWGVPSLRYLNLTHNNITSLLDYNF-KGMMNLQELYLDFNKIESIPSSVFMHLSDL 191
F+G+ SL L L +N +T L D + M L L L+ N I ++ + F+ +L
Sbjct: 152 SPLTFYGLNSLILLALMNNVLTHLPDKPLCQYMPRLHWLDLEDNHIHNLRNLTFISCGNL 211
Query: 192 RVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLEN 251
VL + N+I+ L N I + P++FKD++EL ++
Sbjct: 212 TVLVMRKNKINHLNENTFAPLQKLAELDLGSNKIENLPPQVFKDLKELSQLNLSYNPIQK 271
Query: 252 INPMMYSILADLIYLDL 268
I + L L L L
Sbjct: 272 IQADQFDYLVKLKSLSL 288
Score = 131 (51.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 38/148 (25%), Positives = 70/148 (47%)
Query: 305 FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLK 364
F LQ LCL+ N++ + AF L +L +L +S+N++ L+ F+ + L L
Sbjct: 84 FRKYHNLQKLCLQNNKIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVFEDLHR-LEWLI 142
Query: 365 ISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIP-KGLFKMNPHLQFLNLSGNNLQDIH 423
I N++ + ++ T +P K L + P L +L+L N++ ++
Sbjct: 143 IEDNHLSRISPLTFYGLNSLILLALMNNV-LTHLPDKPLCQYMPRLHWLDLEDNHIHNLR 201
Query: 424 NLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
NL + S LT L + +NK +E ++
Sbjct: 202 NLTFISCGNLTVLVMRKNKINHLNENTF 229
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 53/224 (23%), Positives = 90/224 (40%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+++ +L++L + N+ I +I + F G+ SL L L+HN IT L F+ + L+ L +
Sbjct: 84 FRKYHNLQKLCLQNNKIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLII 143
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY-NDIVEINPE 231
+ N + I F L+ L +L+L +N ++ L + N I +
Sbjct: 144 EDNHLSRISPLTFYGLNSLILLALMNNVLTHLPDKPLCQYMPRLHWLDLEDNHIHNLRNL 203
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F L R + ++N ++ L L LDLG N+
Sbjct: 204 TFISCGNLTVLVMRKNKINHLNENTFAPLQKLAELDLGSNKIENLPPQVFKDLKELSQLN 263
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNL 335
N I F KL+ L L+ ++ + F L NL
Sbjct: 264 LSYNPIQKIQADQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNL 307
Score = 45 (20.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDI 32
+ L L LS+N I + P +F+D+
Sbjct: 111 LHSLTKLYLSHNRITFLKPGVFEDL 135
>MGI|MGI:2443198 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2443198 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 HOGENOM:HOG000290667
HOVERGEN:HBG056407 CTD:84189 eggNOG:NOG113965 OMA:YFELKAN
OrthoDB:EOG4X0MRT EMBL:AB097575 EMBL:AK029275 IPI:IPI00223927
RefSeq:NP_780708.1 UniGene:Mm.49728 ProteinModelPortal:Q8C110
SMR:Q8C110 STRING:Q8C110 PhosphoSite:Q8C110 PRIDE:Q8C110
Ensembl:ENSMUST00000078386 GeneID:239250 KEGG:mmu:239250
InParanoid:Q8C110 NextBio:384048 Bgee:Q8C110 CleanEx:MM_SLITRK6
Genevestigator:Q8C110 GermOnline:ENSMUSG00000045871 Uniprot:Q8C110
Length = 840
Score = 128 (50.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 38/135 (28%), Positives = 58/135 (42%)
Query: 140 VPSLR--YLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
VP R +L+L +N +T L +F G+ N ++L FN I I + F L L+ L +
Sbjct: 61 VPPSRPFHLSLLNNGLTMLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHIN 120
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
HN + L N I I P F + LK +E++ P ++
Sbjct: 121 HNSLEILKEDTFHGLENLEFLQADNNFITIIEPSAFSKLNRLKVLILNDNAIESLPPNIF 180
Query: 258 SILADLIYLDLGYNQ 272
+ L +LDL NQ
Sbjct: 181 RFVP-LTHLDLRGNQ 194
Score = 115 (45.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 46/175 (26%), Positives = 75/175 (42%)
Query: 43 IFLYLLHSSASVMCPYMCECALDD-RGRYEIVCRRGDMANPIPIGQMDLGTEVL-KIVPS 100
++ YLL+ S + + RG + +C + + I + G L +I
Sbjct: 3 LWTYLLYPSLLACLSLQSQSPMPSVRGSCDTLCNCEEKDGIMIINCEEKGINKLSQISVP 62
Query: 101 EENPNHLTIGPIFQQFQHLEELH-ITNSFIPAIGFH--------PFWGVPSLRYLNLTHN 151
P HL++ H + +TN+ +GF+ F G+ L+ L++ HN
Sbjct: 63 PSRPFHLSLLNNGLTMLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHN 122
Query: 152 NITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
++ L + F G+ NL+ L D N I I S F L+ L+VL L N I L P
Sbjct: 123 SLEILKEDTFHGLENLEFLQADNNFITIIEPSAFSKLNRLKVLILNDNAIESLPP 177
Score = 97 (39.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 26/86 (30%), Positives = 46/86 (53%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L++LHI ++ + + F G+ +L +L +N IT + F + L+ L L+ N IE
Sbjct: 114 LKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITIIEPSAFSKLNRLKVLILNDNAIE 173
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKL 204
S+P ++F + L L L N++ L
Sbjct: 174 SLPPNIFRFVP-LTHLDLRGNQLQTL 198
Score = 85 (35.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N V+ E SF + +LQ L L N L K+ F L +L L + YN + + +F+
Sbjct: 396 NRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMFLGLHSLEYLYLEYNAVKEILPGTFN 455
Query: 355 PIENSLRDLKISGNNIQ 371
P+ L+ L ++ N +Q
Sbjct: 456 PMPK-LKVLYLNNNLLQ 471
Score = 77 (32.2 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN +++ + F L++L L NR+ + +F NLT L +L ++ N L +L F
Sbjct: 371 GNIIHTLMKSDLTDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMF 430
Query: 354 DPIENSLRDLKISGNNIQ 371
+ +SL L + N ++
Sbjct: 431 LGL-HSLEYLYLEYNAVK 447
Score = 68 (29.0 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 32/131 (24%), Positives = 56/131 (42%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXX 373
L L N + + + T+ L L + N+++ LE SF + L+ L ++GN++
Sbjct: 367 LILAGNIIHTLMKSDLTDYFTLEMLHLGNNRIEVLEEGSFMNLTR-LQKLYLNGNHL--T 423
Query: 374 XXXXXXXXXXXXXXXXIADMNYT-DIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIK 432
+ N +I G F P L+ L L+ N LQ + ++ I
Sbjct: 424 KLNKGMFLGLHSLEYLYLEYNAVKEILPGTFNPMPKLKVLYLNNNLLQVLPAHIFLG-IP 482
Query: 433 LTHLDLSRNKF 443
LT ++L N+F
Sbjct: 483 LTRVNLKTNQF 493
Score = 52 (23.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 24/105 (22%), Positives = 38/105 (36%)
Query: 252 INPMMYSILADLIYLD---LGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
I+ +M S L D L+ LG N+ GNH + + F
Sbjct: 374 IHTLMKSDLTDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMFLGL 433
Query: 309 FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
L+ L L+ N + ++ F + L L ++ N L L F
Sbjct: 434 HSLEYLYLEYNAVKEILPGTFNPMPKLKVLYLNNNLLQVLPAHIF 478
Score = 46 (21.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 398 IPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
+ +G F LQ L L+GN+L ++ ++ L +L L N K
Sbjct: 401 LEEGSFMNLTRLQKLYLNGNHLTKLNKGMFLGLHSLEYLYLEYNAVK 447
>UNIPROTKB|Q27972 [details] [associations]
symbol:CHAD "Chondroadherin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U08018 IPI:IPI00711211 PIR:A53860 RefSeq:NP_776444.1
UniGene:Bt.91648 ProteinModelPortal:Q27972 IntAct:Q27972
STRING:Q27972 PRIDE:Q27972 GeneID:281069 KEGG:bta:281069 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 InParanoid:Q27972 KO:K06248
OrthoDB:EOG4K9BCM NextBio:20805150 InterPro:IPR026906 Pfam:PF13306
Uniprot:Q27972
Length = 361
Score = 159 (61.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 61/245 (24%), Positives = 103/245 (42%)
Query: 126 NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVF 185
N+F P + + F +P+L L+L H I + F+G+ L LYL N I + + F
Sbjct: 63 NNF-PVLATNSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAF 121
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYND-IVEINPEIFKDIQELKTFKC 244
L++L L L HN++++L PR N+ I E+ F+ ++L+
Sbjct: 122 DDLTELTYLYLDHNKVTEL-PRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYL 180
Query: 245 RSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKS 304
L ++ P + +L L NQ N I + +
Sbjct: 181 SENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNA 240
Query: 305 FSSQFK-LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
F S + L+ L L L K + AF +T L + + N+L +L ++F P + SL L
Sbjct: 241 FQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLHQLP-SNF-PFD-SLETL 297
Query: 364 KISGN 368
++ N
Sbjct: 298 TLTNN 302
Score = 151 (58.2 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 48/191 (25%), Positives = 81/191 (42%)
Query: 52 ASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGP 111
A CP C C D + ++C + + IP ++ T++L + + N +
Sbjct: 21 ALAACPQNCHCHSDLQ---HVICDKVGLQK-IP--KVSEKTKLLNL---QRNNFPVLATN 71
Query: 112 IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
F+ +L LH+ + I + F G+ L YL L+HN+I L F + L LY
Sbjct: 72 SFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLY 131
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPE 231
LD NK+ +P + L +L +L L +N+I +L N + + P
Sbjct: 132 LDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPG 191
Query: 232 IFKDIQELKTF 242
D++ L F
Sbjct: 192 ALDDVENLAKF 202
>MGI|MGI:2682211 [details] [associations]
symbol:Rxfp1 "relaxin/insulin-like family peptide receptor
1" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=ISO;ISA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IGI;IDA] [GO:0007189
"adenylate cyclase-activating G-protein coupled receptor signaling
pathway" evidence=ISO] [GO:0007567 "parturition" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0042562 "hormone binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IMP] [GO:0060658 "nipple
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 MGI:MGI:2682211 GO:GO:0016021 GO:GO:0005886
GO:GO:0030154 GO:GO:0046872 GO:GO:0004930 GO:GO:0007189
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030198
GO:GO:0042562 GO:GO:0007188 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372
SMART:SM00013 HSSP:P01130 GO:GO:0060427 CTD:59350
HOVERGEN:HBG026354 KO:K04306 OMA:YTLTTRP GO:GO:0060658
EMBL:AY509975 EMBL:AY255542 IPI:IPI00417064 RefSeq:NP_997617.1
UniGene:Mm.331086 ProteinModelPortal:Q6R6I7 SMR:Q6R6I7
STRING:Q6R6I7 PhosphoSite:Q6R6I7 PRIDE:Q6R6I7
Ensembl:ENSMUST00000078527 GeneID:381489 KEGG:mmu:381489
UCSC:uc008pnv.1 GeneTree:ENSGT00650000093266 HOGENOM:HOG000049056
InParanoid:Q6R6I7 OrthoDB:EOG4NGGM1 ChiTaRS:RXFP1 NextBio:402138
Bgee:Q6R6I7 CleanEx:MM_RXFP1 Genevestigator:Q6R6I7 Uniprot:Q6R6I7
Length = 758
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 60/230 (26%), Positives = 95/230 (41%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
++L N I +L F+ LQ+L L N+I S+ S F L L L L+HNRI+ L
Sbjct: 131 MSLQRNFIRTLPPNGFRKYHELQKLCLQNNRIHSVSVSAFRGLRSLTKLYLSHNRITFLK 190
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI-NPMMYSILADLI 264
P N + I+P F + L + L + + + + L
Sbjct: 191 PGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLH 250
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
+LD N+ N + E +F+ KL L L N++ +
Sbjct: 251 WLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINYLNEHAFTHLQKLDELDLGSNKIENL 310
Query: 325 TTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG---NNIQ 371
F +L L +L+ISYN + ++EV FD + L+ L + G +NIQ
Sbjct: 311 PPNIFKDLKELSQLNISYNPIQKIEVNQFDCLAK-LKSLSLEGIEISNIQ 359
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/207 (26%), Positives = 87/207 (42%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ + L N I ++P + F +L+ L L +NRI ++ +N I
Sbjct: 127 NVTVMSLQRNFIRTLPPNGFRKYHELQKLCLQNNRIHSVSVSAFRGLRSLTKLYLSHNRI 186
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ P +F+D+ L+ L I+P+ + L LI L L N
Sbjct: 187 TFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHM 246
Query: 286 XXXX-XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
GN + +F S L VL +++N++ + AFT+L L ELD+ NK
Sbjct: 247 PRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINYLNEHAFTHLQKLDELDLGSNK 306
Query: 345 LDRLEVASFDPIENSLRDLKISGNNIQ 371
++ L F ++ L L IS N IQ
Sbjct: 307 IENLPPNIFKDLKE-LSQLNISYNPIQ 332
Score = 139 (54.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N + F +LQ LCL+ NR+ V+ +AF L +L +L +S+N++ L+ F+
Sbjct: 136 NFIRTLPPNGFRKYHELQKLCLQNNRIHSVSVSAFRGLRSLTKLYLSHNRITFLKPGVFE 195
Query: 355 PIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIP-KGLFKMNPHLQFLN 413
+ L L I N++ + + T +P K L + P L +L+
Sbjct: 196 DLHR-LEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNA-LTRLPDKPLCQHMPRLHWLD 253
Query: 414 LSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
GN + ++ NL + S LT L + +NK +E ++
Sbjct: 254 FEGNRIHNLRNLTFISCNNLTVLVMRKNKINYLNEHAF 291
Score = 137 (53.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 45/165 (27%), Positives = 68/165 (41%)
Query: 105 NHLT-IGPI-FQQFQHLEELHITNSFIPAIGFHPFWG-VPSLRYLNLTHNNITSLLDYNF 161
NHL+ I P+ F L L + N+ + + P +P L +L+ N I +L + F
Sbjct: 208 NHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTF 267
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
NL L + NKI + F HL L L L N+I L P
Sbjct: 268 ISCNNLTVLVMRKNKINYLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNIS 327
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
YN I +I F + +LK+ + NI M+ L +L ++
Sbjct: 328 YNPIQKIEVNQFDCLAKLKSLSLEGIEISNIQQRMFRPLINLSHI 372
Score = 132 (51.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 105 NHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF- 161
N +T + P +F+ LE L I ++ + I F+G+ SL L L +N +T L D
Sbjct: 184 NRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLC 243
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
+ M L L + N+I ++ + F+ ++L VL + N+I+ L
Sbjct: 244 QHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINYLNEHAFTHLQKLDELDLG 303
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
N I + P IFKD++EL ++ I + LA L L L
Sbjct: 304 SNKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDCLAKLKSLSL 350
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 52/224 (23%), Positives = 87/224 (38%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+++ L++L + N+ I ++ F G+ SL L L+HN IT L F+ + L+ L +
Sbjct: 146 FRKYHELQKLCLQNNRIHSVSVSAFRGLRSLTKLYLSHNRITFLKPGVFEDLHRLEWLII 205
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY-NDIVEINPE 231
+ N + I F L+ L +L L +N +++L + N I +
Sbjct: 206 EDNHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNL 265
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F L R + +N ++ L L LDLG N+
Sbjct: 266 TFISCNNLTVLVMRKNKINYLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLN 325
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNL 335
N I F KL+ L L+ ++ + F L NL
Sbjct: 326 ISYNPIQKIEVNQFDCLAKLKSLSLEGIEISNIQQRMFRPLINL 369
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDI 32
+ L L LS+N I + P +F+D+
Sbjct: 173 LRSLTKLYLSHNRITFLKPGVFEDL 197
>UNIPROTKB|P51884 [details] [associations]
symbol:LUM "Lumican" species:9606 "Homo sapiens"
[GO:0007601 "visual perception" evidence=IEA] [GO:0014070 "response
to organic cyclic compound" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=NAS]
[GO:0005583 "fibrillar collagen" evidence=IDA] [GO:0005518
"collagen binding" evidence=IDA] [GO:0005576 "extracellular region"
evidence=NAS;TAS] [GO:0005201 "extracellular matrix structural
constituent" evidence=NAS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0018146 "keratan sulfate biosynthetic process" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0042339 "keratan sulfate metabolic process" evidence=TAS]
[GO:0042340 "keratan sulfate catabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0005615
"extracellular space" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] Reactome:REACT_111217 InterPro:IPR001611
InterPro:IPR027219 PROSITE:PS51450 Reactome:REACT_116125
GO:GO:0005615 GO:GO:0005975 GO:GO:0007601 GO:GO:0030199
GO:GO:0045944 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
EMBL:CH471054 GO:GO:0014070 GO:GO:0005518 GO:GO:0051216
GO:GO:0043202 GO:GO:0005796 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0070848 GO:GO:0018146 GO:GO:0042340
GO:GO:0005201 GO:GO:0005583 HOGENOM:HOG000234447 HOVERGEN:HBG108061
CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:U18728 EMBL:U21128 EMBL:BT006707
EMBL:AK312682 EMBL:BC007038 EMBL:BC035997 IPI:IPI00020986
RefSeq:NP_002336.1 UniGene:Hs.406475 ProteinModelPortal:P51884
SMR:P51884 IntAct:P51884 MINT:MINT-1422554 STRING:P51884
PhosphoSite:P51884 DMDM:20141464 PaxDb:P51884 PeptideAtlas:P51884
PRIDE:P51884 DNASU:4060 Ensembl:ENST00000266718 GeneID:4060
KEGG:hsa:4060 UCSC:uc001tbm.3 GeneCards:GC12M091430 HGNC:HGNC:6724
HPA:CAB022193 HPA:HPA001522 MIM:600616 neXtProt:NX_P51884
PharmGKB:PA30486 InParanoid:P51884 PhylomeDB:P51884 ChiTaRS:LUM
GenomeRNAi:4060 NextBio:15912 PMAP-CutDB:P51884 Bgee:P51884
CleanEx:HS_LUM Genevestigator:P51884 GermOnline:ENSG00000139329
Uniprot:P51884
Length = 338
Score = 154 (59.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 60/224 (26%), Positives = 100/224 (44%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIES--IPSSVFMHLSDLRVLSLAH 198
P ++YL L +N I + + F+ + +LQ L LD N +E+ I VF L L+ L + H
Sbjct: 66 PGIKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLLENSKIKGRVFSKLKQLKKLHINH 125
Query: 199 NRISK-LAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGL-ENINPMM 256
N +++ + P +N I ++ F+ + L + L E+
Sbjct: 126 NNLTESVGP----LPKSLEDLQLTHNKITKLGS--FEGLVNLTFIHLQHNRLKEDAVSAA 179
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L L YLDL +NQ ++ P K F++ LQ L L
Sbjct: 180 FKGLKSLEYLDLSFNQIARLPSGLPVSLLTLYLDNNKISNIPDEYFKRFNA---LQYLRL 236
Query: 317 KRNRLAK--VTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
N LA + +F N+++L+ELD+SYNKL + + + +EN
Sbjct: 237 SHNELADSGIPGNSF-NVSSLVELDLSYNKLKNIPTVN-ENLEN 278
Score = 146 (56.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/166 (30%), Positives = 79/166 (47%)
Query: 110 GPIFQQFQHLEELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQ 168
G +F + + L++LHI N+ ++G P SL L LTHN IT L +F+G++NL
Sbjct: 109 GRVFSKLKQLKKLHINHNNLTESVGPLP----KSLEDLQLTHNKITKL--GSFEGLVNLT 162
Query: 169 ELYLDFNKI-ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
++L N++ E S+ F L L L L+ N+I++L P N I
Sbjct: 163 FIHLQHNRLKEDAVSAAFKGLKSLEYLDLSFNQIARL-PSGLPVSLLTLYLDN--NKISN 219
Query: 228 INPEIFKDIQELKTFKCRSCGLENIN-PMMYSILADLIYLDLGYNQ 272
I E FK L+ + L + P ++ L+ LDL YN+
Sbjct: 220 IPDEYFKRFNALQYLRLSHNELADSGIPGNSFNVSSLVELDLSYNK 265
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 116 FQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGM-MNLQELYLDF 174
F HL+ + + A F G+ SL YL+L+ N I L G+ ++L LYLD
Sbjct: 163 FIHLQHNRLKEDAVSAA----FKGLKSLEYLDLSFNQIARLPS----GLPVSLLTLYLDN 214
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLA-PRXXXXXXXXXXXXXXYN---DIVEINP 230
NKI +IP F + L+ L L+HN ++ P YN +I +N
Sbjct: 215 NKISNIPDEYFKRFNALQYLRLSHNELADSGIPGNSFNVSSLVELDLSYNKLKNIPTVNE 274
Query: 231 EI---FKDIQELKTFKCRS-CGLENINPMMYSILADL 263
+ + ++ +L+ F +S C + + P+ YS + L
Sbjct: 275 NLENYYLEVNQLEKFDIKSFCKI--LGPLSYSKIKHL 309
Score = 53 (23.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF----DPIENS-LRDLKISGN 368
L L N+L + T NL N L++ N+L++ ++ SF P+ S ++ L++ GN
Sbjct: 259 LDLSYNKLKNIPTVN-ENLENYY-LEV--NQLEKFDIKSFCKILGPLSYSKIKHLRLDGN 314
Query: 369 NI 370
I
Sbjct: 315 RI 316
>ZFIN|ZDB-GENE-050522-29 [details] [associations]
symbol:zgc:113307 "zgc:113307" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-050522-29
eggNOG:COG4886 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HOGENOM:HOG000234447 HOVERGEN:HBG108061 EMBL:BC095895
IPI:IPI00607427 RefSeq:NP_001018560.1 UniGene:Dr.91088
ProteinModelPortal:Q501S3 DNASU:553753 GeneID:553753
KEGG:dre:553753 InParanoid:Q501S3 OrthoDB:EOG4H9XNG
NextBio:20880475 Uniprot:Q501S3
Length = 343
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 71/238 (29%), Positives = 108/238 (45%)
Query: 139 GVP-SLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKI--ESIPSSVFMHLSDLRVLS 195
G+P L+YL L NNITSL F L+ L LD N++ E + + +F L+ L L
Sbjct: 68 GLPFRLQYLFLQGNNITSLGSRAFDNTTYLRWLILDHNELLSEQLDNVLFSSLTRLVNLF 127
Query: 196 LAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPM 255
+ HN ++K+ P YN I +I+ F+++ L + L+ I
Sbjct: 128 INHNNLTKV-P--AGLPSGLKQLRLAYNHIEKISEGDFQNLDSLTLILLQGNRLKTIEEG 184
Query: 256 MYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLC 315
+ L L LDL +N N + E S + L+ L
Sbjct: 185 DFKGLGALNLLDLSHN---FLDTFPKHLPPSVQQLYLSNNSLTGLSENSLHAFSGLRYLR 241
Query: 316 LKRNRLA--KVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
L N+L ++ AF NLT+L+ELD+SYN+L E+ S PI +L+ L + N+IQ
Sbjct: 242 LGHNKLRNERLDPGAF-NLTSLVELDLSYNRLT--EIPSV-PI--TLQYLYLEVNHIQ 293
>RGD|1310957 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10116 "Rattus norvegicus" [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISO]
[GO:0021756 "striatum development" evidence=ISO] [GO:0030534 "adult
behavior" evidence=ISO] [GO:0043588 "skin development"
evidence=ISO] [GO:0048813 "dendrite morphogenesis" evidence=ISO]
[GO:0072358 "cardiovascular system development" evidence=ISO]
REFSEQ:NM_001107284 Ncbi:NP_001100754
Length = 958
Score = 117 (46.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 47/158 (29%), Positives = 72/158 (45%)
Query: 55 MCPYMCECALDDRGRYEIVCR-RG-----DMANP-IPIGQMDLGTEVL-KIVPSEENPNH 106
+C C C D G + C RG +++ P PI + L +L ++ P+E
Sbjct: 47 ICDNACPCEEKD-GILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNE----- 100
Query: 107 LTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
F + LH+ ++ I I F G+ LR L+L +N + L D F G+ N
Sbjct: 101 ------FVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLEN 154
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L+ L +D+N I I + F L L+VL L N +S L
Sbjct: 155 LEYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLLSGL 192
Score = 102 (41.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN-LQELY 171
F + L LH+ N+ + + F G+ +L YL + +N I S+++ N G ++ LQ L
Sbjct: 125 FHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI-SVIEPNAFGKLHMLQVLI 183
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L+ N + +P+++F + L L L NR+ KL P
Sbjct: 184 LNDNLLSGLPNNLFRFVP-LTHLDLRGNRL-KLLP 216
Score = 97 (39.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/128 (26%), Positives = 56/128 (43%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L N + V T F T L L + N++ ++ +F + N LR L ++GN I+
Sbjct: 416 LTENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGN-LRRLYLNGNRIERLSP 474
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
++ +I G F P+LQ L L+ N LQ + + ++ S + L
Sbjct: 475 ELFYGLQSLQYLFLQYNL-IREIQSGTFDPVPNLQLLFLNNNQLQAMPSGVF-SGLTLLR 532
Query: 436 LDLSRNKF 443
L+L N F
Sbjct: 533 LNLRSNSF 540
Score = 93 (37.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I +++F L+ L L NR+ +++ F L +L L + YN + ++ +FD
Sbjct: 443 NRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGTFD 502
Query: 355 PIENSLRDLKISGNNIQ 371
P+ N L+ L ++ N +Q
Sbjct: 503 PVPN-LQLLFLNNNQLQ 518
Score = 91 (37.1 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 39/161 (24%), Positives = 72/161 (44%)
Query: 46 YLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPN 105
++LH+ A + + CA + Y +C D N P + D G +L + S EN
Sbjct: 21 WMLHTLAFAVTSLVLSCA-ETIDYYGEIC---D--NACPCEEKD-G--ILTV--SCENRG 69
Query: 106 HLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMM 165
+++ I + L ++ + + + + F L+L N I + F G+
Sbjct: 70 IISLSEISPPRFPIYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLR 129
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L+ L+L+ NK+E + F+ L +L L + +N IS + P
Sbjct: 130 GLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEP 170
Score = 76 (31.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N+ V+ F L +L L NR++ + AF +L NL L ++ N+++RL F
Sbjct: 419 NYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFY 478
Query: 355 PIENSLRDLKISGNNIQ 371
++ SL+ L + N I+
Sbjct: 479 GLQ-SLQYLFLQYNLIR 494
>UNIPROTKB|F1SMI0 [details] [associations]
symbol:TLR4 "Toll-like receptor" species:9823 "Sus scrofa"
[GO:0045087 "innate immune response" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0050829 "defense response
to Gram-negative bacterium" evidence=IEA] [GO:0050707 "regulation
of cytokine secretion" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=IEA] [GO:0042116
"macrophage activation" evidence=IEA] [GO:0034142 "toll-like
receptor 4 signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0006954 InterPro:IPR000483 SMART:SM00082
GO:GO:0045087 GO:GO:0005622 GO:GO:0004888
GeneTree:ENSGT00700000104185 SUPFAM:SSF52200 PANTHER:PTHR24365:SF9
EMBL:CR938718 Ensembl:ENSSSCT00000006051 OMA:RNATCQI
ArrayExpress:F1SMI0 Uniprot:F1SMI0
Length = 841
Score = 109 (43.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 42/173 (24%), Positives = 73/173 (42%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+ ++ +F +L+ L + + L + + F +L NL LDISY + + F +
Sbjct: 412 ITMKSNFMGLEQLEYLDFQHSSLKQANDFSIFLSLRNLHYLDISYTNIHVVFRGIFAGLV 471
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
SL+ LK++GN+ Q ++ + + F P LQ LN+S N
Sbjct: 472 -SLQTLKMAGNSFQNNLLPDVFTDLTNLILLDLSKCQLEQVSQRAFHSLPRLQVLNMSHN 530
Query: 418 NLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIH--KAAKNSFA 468
L + L Y+ L LD S N E+ + P+++ KN F+
Sbjct: 531 RLLFLDTLPYKPLHSLRILDCSYNLIVASKEQE-LQHLPRSLAFLNLTKNDFS 582
Score = 104 (41.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
+Q +L L +T + I ++ F G+PSL+ L N+ SL D+ + L+EL +
Sbjct: 98 YQGLNYLSTLILTGNPIQSLALGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELNV 157
Query: 173 DFNKIESIP-SSVFMHLSDLRVLSLAHNRISKL 204
N I S F +L +L L L+ N+I +
Sbjct: 158 AHNHIHSFKLPEYFSNLPNLEHLDLSKNKIENI 190
Score = 97 (39.2 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 29/89 (32%), Positives = 42/89 (47%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F F L+ L ++ I I + G+ L L LT N I SL F G+ +LQ+L
Sbjct: 74 FSSFPELQVLDLSRCEIQTIDDDAYQGLNYLSTLILTGNPIQSLALGAFSGLPSLQKLVA 133
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
+ S+ HL L+ L++AHN I
Sbjct: 134 VETNLASLEDFPIGHLKTLKELNVAHNHI 162
Score = 88 (36.0 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 103 NP-NHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSL-LDYN 160
NP L +G F L++L + + ++ P + +L+ LN+ HN+I S L
Sbjct: 112 NPIQSLALGA-FSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELNVAHNHIHSFKLPEY 170
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
F + NL+ L L NKIE+I L + +L+L+
Sbjct: 171 FSNLPNLEHLDLSKNKIENIYHEHLQVLHQVPLLNLS 207
Score = 87 (35.7 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 32/148 (21%), Positives = 60/148 (40%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L ++ +++ + + F P L+ L+L+ I ++ D ++G+ L L L N I+S+
Sbjct: 59 LDLSFNYLSHLDSNSFSSFPELQVLDLSRCEIQTIDDDAYQGLNYLSTLILTGNPIQSLA 118
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN-PEIFKDIQELK 240
F L L+ L ++ L +N I PE F ++ L+
Sbjct: 119 LGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELNVAHNHIHSFKLPEYFSNLPNLE 178
Query: 241 TFKCRSCGLENINPMMYSILADLIYLDL 268
+ENI +L + L+L
Sbjct: 179 HLDLSKNKIENIYHEHLQVLHQVPLLNL 206
Score = 83 (34.3 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 407 PHLQFLNLSGNNLQD----IHNLLYQSNIKLTHLDLSRNK-------FKGFDEKSYIMSE 455
P+LQFL+LSGN+L HN KL HLDLS N+ F G ++ Y+ +
Sbjct: 373 PNLQFLDLSGNHLSFKGCCSHNEF--GTTKLKHLDLSFNEIITMKSNFMGLEQLEYLDFQ 430
Query: 456 PKNIHKAAKNSFALQSSMGKNAEY 479
++ +A N F++ S+ +N Y
Sbjct: 431 HSSLKQA--NDFSIFLSL-RNLHY 451
>UNIPROTKB|F1NKM7 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:AYGKAPS EMBL:AADN02063998 EMBL:AADN02063999 IPI:IPI00591161
ProteinModelPortal:F1NKM7 Ensembl:ENSGALT00000000792 Uniprot:F1NKM7
Length = 811
Score = 135 (52.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 44/164 (26%), Positives = 71/164 (43%)
Query: 77 GDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHP 136
G+ + IP G+ G LKI+ + N + +L+ L + + I +
Sbjct: 4 GNQISSIP-GEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEES 62
Query: 137 FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSL 196
F G+ SLR+L L N +T + + LQ + L N+I IP F +LS L VL L
Sbjct: 63 FEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLHL 122
Query: 197 AHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
+NRI +L YN+++E P + + L+
Sbjct: 123 HNNRIQRLGANGFDGLHNLETLDLNYNELLEF-PGAIRTLGRLQ 165
Score = 132 (51.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 69/320 (21%), Positives = 118/320 (36%)
Query: 124 ITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSS 183
++ + I +I F G+ SL+ L L +N ++ + + + NLQ L LD N I +P
Sbjct: 2 LSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEE 61
Query: 184 VFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFK 243
F L LR L L N ++++ R N I I F+++ L
Sbjct: 62 SFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLH 121
Query: 244 CRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEK 303
+ ++ + + L +L LDL YN+ N+ I E
Sbjct: 122 LHNNRIQRLGANGFDGLHNLETLDLNYNELLEFPGAIRTLGRLQELGFH-NNNIKAIPEN 180
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN--SLR 361
+F LQ + N + V +AF L L L ++ ++ F ++ SL
Sbjct: 181 AFVGNPLLQTIHFYDNPIQFVGQSAFQYLPKLHTLSLN----GATDIREFPDLKGTTSLE 236
Query: 362 DLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQD 421
L ++ I+ ++ D+P F L+ L L N + +
Sbjct: 237 VLTLTRAGIRLLPRAVCQQLPNLRVLE-LSHNKIEDLPS--FHRCQRLEELGLQHNRIHE 293
Query: 422 IHNLLYQSNIKLTHLDLSRN 441
I + L +DLS N
Sbjct: 294 IRADTFVQLTALRSIDLSWN 313
Score = 127 (49.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 45/152 (29%), Positives = 64/152 (42%)
Query: 90 LGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHIT--NSFIPAIGFHPFWGVPSLRYLN 147
+G +L+ + +NP +G FQ+L +LH N F G SL L
Sbjct: 183 VGNPLLQTIHFYDNPIQF-VGQ--SAFQYLPKLHTLSLNGATDIREFPDLKGTTSLEVLT 239
Query: 148 LTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPR 207
LT I L + + NL+ L L NKIE +PS F L L L HNRI ++
Sbjct: 240 LTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDLPS--FHRCQRLEELGLQHNRIHEIRAD 297
Query: 208 XXXXXXXXXXXXXXYNDIVEINPEIFKDIQEL 239
+NDI I+P+ F ++ L
Sbjct: 298 TFVQLTALRSIDLSWNDIHFIHPDAFVTLRSL 329
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 62/259 (23%), Positives = 102/259 (39%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN--FKGMMNLQEL 170
FQ L LH+ N+ I +G + F G+ +L L+L +N LL++ + + LQEL
Sbjct: 111 FQNLSSLVVLHLHNNRIQRLGANGFDGLHNLETLDLNYNE---LLEFPGAIRTLGRLQEL 167
Query: 171 YLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXX-XXXXXXXXXYNDIVEIN 229
N I++IP + F+ L+ + N I + DI E
Sbjct: 168 GFHNNNIKAIPENAFVGNPLLQTIHFYDNPIQFVGQSAFQYLPKLHTLSLNGATDIREF- 226
Query: 230 PEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
P++ K L+ G+ + + L +L L+L +N+
Sbjct: 227 PDL-KGTTSLEVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDLPSFHRCQRLEELG 285
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
N I +F L+ + L N + + AF L +L +LD+S N+L L
Sbjct: 286 LQH--NRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLTKLDLSDNRLAALP 343
Query: 350 VASFDPIENSLRDLKISGN 368
+ SL LK+ GN
Sbjct: 344 LGGL----GSLTHLKLQGN 358
Score = 106 (42.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
G F L+ L + N+ + I +P+L+ L L N I+ + + +F+G+ +L+
Sbjct: 12 GEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEESFEGLQSLRH 71
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN 229
L+LD N + IP L L+ ++LA N+I ++ N I +
Sbjct: 72 LWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLHLHNNRIQRLG 131
Query: 230 PEIFKDIQELKT 241
F + L+T
Sbjct: 132 ANGFDGLHNLET 143
Score = 76 (31.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDL 363
SF +L+ L L+ NR+ ++ F LT L +D+S+N + + +F + SL L
Sbjct: 274 SFHRCQRLEELGLQHNRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLR-SLTKL 332
Query: 364 KISGNNI 370
+S N +
Sbjct: 333 DLSDNRL 339
Score = 51 (23.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 409 LQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
L+ ++LS N++ IH + + LT LDLS N+
Sbjct: 305 LRSIDLSWNDIHFIHPDAFVTLRSLTKLDLSDNR 338
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 7/16 (43%), Positives = 14/16 (87%)
Query: 8 MSKLKSLDLSYNDIVE 23
+ L++LDL+YN+++E
Sbjct: 138 LHNLETLDLNYNELLE 153
>UNIPROTKB|G3N2N1 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:DAAA02067944 RefSeq:XP_002699667.1
RefSeq:XP_591589.3 UniGene:Bt.78166 Ensembl:ENSBTAT00000057033
GeneID:540117 KEGG:bta:540117 NextBio:20878426 Uniprot:G3N2N1
Length = 844
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 44/164 (26%), Positives = 69/164 (42%)
Query: 43 IFLYLLHSSASVMCPYMCECALD--DRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPS 100
I +Y S + CP C C D G + C+ N + + L +
Sbjct: 327 IMVYQTKSPVPLTCPSSCVCTSQSSDNG-LNVNCQERKFTNISDLQPKPTSPKKLYLTG- 384
Query: 101 EENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N + ++ L+ LH+ N+ I I F + SLR L L N + L
Sbjct: 385 --NYLQMVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLFPAM 442
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ +LQ LYL++N I+ I F L +L++L L +N + L
Sbjct: 443 FDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSL 486
Score = 116 (45.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 103 NPNHLT-IGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N LT + P F + + LH+ N+ + I F G+ +L+ L+L +N + L +
Sbjct: 70 NGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDT 129
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ +L+ L D+N I +I + F L+ L+VL L N + L
Sbjct: 130 FLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSL 173
Score = 108 (43.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 31/94 (32%), Positives = 50/94 (53%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F + L+ LH+ N+ + + F G+ SL YL +N I+++ F + L+ L L
Sbjct: 106 FSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLIL 165
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ N + S+PS+VF + L L L NR+ KL P
Sbjct: 166 NDNLLLSLPSNVFRFVL-LTHLDLRGNRL-KLMP 197
Score = 96 (38.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN+ ++ + L +L L NR+A + AFTNLT+L L ++ N L+ L A F
Sbjct: 384 GNYLQMVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLFPAMF 443
Query: 354 DPIENSLRDLKISGNNIQ 371
D ++ SL+ L + N I+
Sbjct: 444 DGLQ-SLQYLYLEYNVIK 460
Score = 86 (35.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 102 ENPNHLTIGPIFQQFQH-LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
EN T+ + Q Q+ + +L + + + + + F + L+L +N + +
Sbjct: 47 ENKGFTTVS-LLQPPQYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGA 105
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ L+ L+L+ NK+E + F+ L L L +N IS +
Sbjct: 106 FSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISAI 149
Score = 76 (31.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 31/127 (24%), Positives = 49/127 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L N +T L F N L+L N ++ I + F L L+ L L +N++ L
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN I I F + +LK L ++ ++ + L +
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTH 185
Query: 266 LDLGYNQ 272
LDL N+
Sbjct: 186 LDLRGNR 192
Score = 69 (29.3 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N VI E +F++ L+ L L N L + F L +L L + YN + ++ +FD
Sbjct: 409 NRIAVIQEGAFTNLTSLRRLYLNGNYLEVLFPAMFDGLQSLQYLYLEYNVIKEIKPLTFD 468
Query: 355 PIENSLRDLKISGN 368
+ N L+ L ++ N
Sbjct: 469 ALIN-LQLLFLNNN 481
Score = 62 (26.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 25/92 (27%), Positives = 36/92 (39%)
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
YS L DL++L G N+ GN+ V+ F LQ L L
Sbjct: 398 YSSL-DLLHL--GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLFPAMFDGLQSLQYLYL 454
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
+ N + ++ F L NL L ++ N L L
Sbjct: 455 EYNVIKEIKPLTFDALINLQLLFLNNNLLRSL 486
Score = 60 (26.2 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 32/129 (24%), Positives = 53/129 (41%)
Query: 329 FTNLTNLIELDISYNKL----DRLE-VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXX 383
FTN+++L S KL + L+ V D +E S DL GNN +
Sbjct: 364 FTNISDLQPKPTSPKKLYLTGNYLQMVYKNDLLEYSSLDLLHLGNN-RIAVIQEGAFTNL 422
Query: 384 XXXXXXIADMNYTDIP-KGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+ NY ++ +F LQ+L L N +++I L + + I L L L+ N
Sbjct: 423 TSLRRLYLNGNYLEVLFPAMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNL 482
Query: 443 FKGFDEKSY 451
+ + +
Sbjct: 483 LRSLPDNIF 491
>UNIPROTKB|E9PCA3 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0030154 GO:GO:0004930 GO:GO:0007189 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007567
InterPro:IPR000372 SMART:SM00013 EMBL:AC107219 GO:GO:0060427
HGNC:HGNC:19718 GO:GO:0060658 EMBL:AC019341 EMBL:AC107056
EMBL:AC108017 EMBL:AC121161 EMBL:AC125489 IPI:IPI00965023
ProteinModelPortal:E9PCA3 SMR:E9PCA3 Ensembl:ENST00000460056
ArrayExpress:E9PCA3 Bgee:E9PCA3 Uniprot:E9PCA3
Length = 676
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 61/230 (26%), Positives = 95/230 (41%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
++L N I L FK +LQ+LYL NKI SI F L+ L L L+HNRI+ L
Sbjct: 50 MSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLK 109
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI-NPMMYSILADLI 264
P N + I+P F + L + L + + + + L
Sbjct: 110 PGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLH 169
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
+LDL N N + E +F+ KL L L N++ +
Sbjct: 170 WLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENL 229
Query: 325 TTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG---NNIQ 371
F +L L +L++SYN + +++ FD + L+ L + G +NIQ
Sbjct: 230 PPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVK-LKSLSLEGIEISNIQ 278
Score = 158 (60.7 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 52/207 (25%), Positives = 85/207 (41%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ + L +N I +P F + DL+ L L +N+I+ ++ +N I
Sbjct: 46 NVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRI 105
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ P +F+D+ L+ L I+P + L LI L L N
Sbjct: 106 TFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHM 165
Query: 286 XXXX-XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
GNH + +F S L VL +++N++ + F L L ELD+ NK
Sbjct: 166 PRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNK 225
Query: 345 LDRLEVASFDPIENSLRDLKISGNNIQ 371
++ L F ++ L L +S N IQ
Sbjct: 226 IENLPPLIFKDLKE-LSQLNLSYNPIQ 251
Score = 137 (53.3 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 53/224 (23%), Positives = 89/224 (39%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + L++L++ N+ I +I + F G+ SL L L+HN IT L F+ + L+ L +
Sbjct: 65 FKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLII 124
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY-NDIVEINPE 231
+ N + I F L+ L +L L +N +++L + N I +
Sbjct: 125 EDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNL 184
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F L R + ++N ++ L L LDLG N+
Sbjct: 185 TFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLN 244
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNL 335
N I F KL+ L L+ ++ + F L NL
Sbjct: 245 LSYNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNL 288
Score = 132 (51.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 45/165 (27%), Positives = 69/165 (41%)
Query: 105 NHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWG-VPSLRYLNLTHNNITSLLDYNF 161
NHL+ I P F L L + N+ + + P +P L +L+L N+I +L + F
Sbjct: 127 NHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTF 186
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
NL L + NKI + + F L L L L N+I L P
Sbjct: 187 ISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLS 246
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
YN I +I F + +LK+ + NI M+ L +L ++
Sbjct: 247 YNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHI 291
Score = 131 (51.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 38/148 (25%), Positives = 72/148 (48%)
Query: 305 FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLK 364
F + LQ L L+ N++ ++ AF L +L +L +S+N++ L+ F+ + L L
Sbjct: 65 FKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHR-LEWLI 123
Query: 365 ISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIP-KGLFKMNPHLQFLNLSGNNLQDIH 423
I N++ + ++ T +P K L + P L +L+L GN++ ++
Sbjct: 124 IEDNHLSRISPPTFYGLNSLILLVLMNNV-LTRLPDKPLCQHMPRLHWLDLEGNHIHNLR 182
Query: 424 NLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
NL + S LT L + +NK +E ++
Sbjct: 183 NLTFISCSNLTVLVMRKNKINHLNENTF 210
Score = 130 (50.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 47/167 (28%), Positives = 74/167 (44%)
Query: 105 NHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF- 161
N +T + P +F+ LE L I ++ + I F+G+ SL L L +N +T L D
Sbjct: 103 NRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLC 162
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
+ M L L L+ N I ++ + F+ S+L VL + N+I+ L
Sbjct: 163 QHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLG 222
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
N I + P IFKD++EL ++ I + L L L L
Sbjct: 223 SNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSL 269
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 44/217 (20%), Positives = 82/217 (37%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
L+ L L +N ITS+ Y F+G+ +L +LYL N+I + VF L L L + N +S
Sbjct: 71 LQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLS 130
Query: 203 KLAPRXXXXXXXXXXXXXXYNDIVEI-NPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
+++P N + + + + + + L + N+ + + +
Sbjct: 131 RISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFISCS 190
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L L + N+ N + F +L L L N +
Sbjct: 191 NLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPI 250
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
K+ F L L L + ++ ++ F P+ N
Sbjct: 251 QKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMN 287
Score = 47 (21.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDI 32
++ L L LS+N I + P +F+D+
Sbjct: 92 LNSLTKLYLSHNRITFLKPGVFEDL 116
>UNIPROTKB|Q7L0X0 [details] [associations]
symbol:TRIL "TLR4 interactor with leucine rich repeats"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0002718 "regulation of cytokine production involved in immune
response" evidence=IDA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IDA] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CH471073 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 EMBL:CH236948
InterPro:IPR000372 SMART:SM00013 GO:GO:0034142 GO:GO:0046696
GO:GO:0001530 HSSP:Q9BZR6 EMBL:AC005013 Pfam:PF01463 EMBL:AB014544
EMBL:BC036337 IPI:IPI00006556 RefSeq:NP_055632.2 UniGene:Hs.21572
ProteinModelPortal:Q7L0X0 SMR:Q7L0X0 IntAct:Q7L0X0 DMDM:311033514
PRIDE:Q7L0X0 GeneID:9865 KEGG:hsa:9865 UCSC:uc003szt.3 CTD:9865
GeneCards:GC07M028992 HGNC:HGNC:22200 MIM:613356 neXtProt:NX_Q7L0X0
HOVERGEN:HBG066060 GenomeRNAi:9865 NextBio:37186
Genevestigator:Q7L0X0 GO:GO:0002718 Uniprot:Q7L0X0
Length = 811
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 62/258 (24%), Positives = 101/258 (39%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F++ LEEL++ N+ + A+ + LR L N I+ L +F+G+ +L +L L
Sbjct: 103 FEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRL 162
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI--NP 230
D N + ++P +VF L +L L L NRI L N++ +
Sbjct: 163 DGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSANELQPSLRHA 222
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
F ++ L + + L+++ P ++ L L L L NQ
Sbjct: 223 ATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALREL 282
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
GN + L+ L L N L+ + F +L L EL + N L L
Sbjct: 283 RLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALSG 342
Query: 351 ASFDPIENSLRDLKISGN 368
F +L L + GN
Sbjct: 343 DIF-AASPALYRLDLDGN 359
Score = 156 (60.0 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 61/266 (22%), Positives = 114/266 (42%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDR 67
+ +L+ LDL YN I ++P+ F+ + + L + LYL ++ + P L
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKL---SRLEE----LYLGNNLLQALAPG----TLAPL 130
Query: 68 GRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNS 127
+ I+ G+ + + G + G E L + + N +F +L LH+ ++
Sbjct: 131 RKLRILYANGNEISRLSRGSFE-GLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESN 189
Query: 128 FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDY--NFKGMMNLQELYLDFNKIESIPSSVF 185
I +G + F + LR+LNL+ N + L + F + +L L L N ++ + +F
Sbjct: 190 RIRFLGKNAFAQLGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIF 249
Query: 186 MHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCR 245
HL L +LSL N+++ LAP N + ++ + + + L+
Sbjct: 250 QHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLS 309
Query: 246 SCGLENINPMMYSILADLIYLDLGYN 271
L ++P + L L L L N
Sbjct: 310 GNELSALHPATFGHLGRLRELSLRNN 335
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 73/329 (22%), Positives = 126/329 (38%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPS--LRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
QH + L TN + + P L Y +L N IT++ ++F + L+ L L +
Sbjct: 34 QHPQHLLCTNRGLRVVPKTSSLPSPHDVLTY-SLGGNFITNITAFDFHRLGQLRRLDLQY 92
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
N+I S+ F LS L L L +N + LAP N+I ++ F+
Sbjct: 93 NQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEISRLSRGSFE 152
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
++ L + L + +++ L +L+YL L N+
Sbjct: 153 GLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSA 212
Query: 295 NHFPVILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N L + F+ L L L N L + F +L L L + N+L L +
Sbjct: 213 NELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEA 272
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
F +E +LR+L++ GN + ++ + + F L+ L
Sbjct: 273 FWGLE-ALRELRLEGNRLSQLPTALLEPLHSLEALD-LSGNELSALHPATFGHLGRLREL 330
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+L N L + ++ ++ L LDL N
Sbjct: 331 SLRNNALSALSGDIFAASPALYRLDLDGN 359
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 97 IVPSEENPNHLTIGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITS 155
++ S N HL GP IFQ L L + + + + FWG+ +LR L L N ++
Sbjct: 234 LILSANNLQHL--GPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQ 291
Query: 156 LLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L + + +L+ L L N++ ++ + F HL LR LSL +N +S L+
Sbjct: 292 LPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALS 341
>UNIPROTKB|F1RQ61 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:FP236785 RefSeq:XP_003135487.1
Ensembl:ENSSSCT00000013911 Ensembl:ENSSSCT00000034054
Ensembl:ENSSSCT00000034972 Ensembl:ENSSSCT00000035609
GeneID:100511615 KEGG:ssc:100511615 Uniprot:F1RQ61
Length = 849
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 46/166 (27%), Positives = 72/166 (43%)
Query: 43 IFLYLLHSSASVMCPYMCECALD--DRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPS 100
I +Y S + CP C C D G + C+ N + + L +
Sbjct: 331 IMVYQTKSPVPLTCPSSCVCTSQSSDNG-LNVNCQERKFTNISDLQPKPTSPKKLYLTG- 388
Query: 101 EENPNHL-TIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLD 158
N+L T+ ++ L+ LH+ N+ I I F + SLR L L N + L
Sbjct: 389 ----NYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYP 444
Query: 159 YNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ +LQ LYL++N I+ I F L +L++L L +N + L
Sbjct: 445 AMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSL 490
Score = 116 (45.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 103 NPNHLT-IGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N LT + P F + + LH+ N+ + I F G+ +L+ L+L +N + L +
Sbjct: 70 NGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDT 129
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ +L+ L D+N I +I + F L+ L+VL L N + L
Sbjct: 130 FLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSL 173
Score = 105 (42.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 30/94 (31%), Positives = 50/94 (53%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F + L+ LH+ N+ + + F G+ SL YL +N I+++ F + L+ L L
Sbjct: 106 FSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLIL 165
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ N + S+PS+VF + L L L NR+ K+ P
Sbjct: 166 NDNLLLSLPSNVFRFVL-LTHLDLRGNRL-KVMP 197
Score = 96 (38.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN+ + + L +L L NR+A + AFTNLT+L L ++ N L+ L A F
Sbjct: 388 GNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPAMF 447
Query: 354 DPIENSLRDLKISGNNIQ 371
D ++ SL+ L + N I+
Sbjct: 448 DGLQ-SLQYLYLEYNVIK 464
Score = 86 (35.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 102 ENPNHLTIGPIFQQFQH-LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
EN T+ + Q Q+ + +L + + + + + F + L+L +N + +
Sbjct: 47 ENKGFTTVS-LLQPPQYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGA 105
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ L+ L+L+ NK+E + F+ L L L +N IS +
Sbjct: 106 FSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISAI 149
Score = 76 (31.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 31/127 (24%), Positives = 49/127 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L N +T L F N L+L N ++ I + F L L+ L L +N++ L
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN I I F + +LK L ++ ++ + L +
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTH 185
Query: 266 LDLGYNQ 272
LDL N+
Sbjct: 186 LDLRGNR 192
Score = 69 (29.3 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N VI E +F++ L+ L L N L + F L +L L + YN + ++ +FD
Sbjct: 413 NRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPAMFDGLQSLQYLYLEYNVIKEIKPLTFD 472
Query: 355 PIENSLRDLKISGN 368
+ N L+ L ++ N
Sbjct: 473 ALIN-LQLLFLNNN 485
Score = 61 (26.5 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 25/92 (27%), Positives = 36/92 (39%)
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
YS L DL++L G N+ GN+ V+ F LQ L L
Sbjct: 402 YSSL-DLLHL--GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPAMFDGLQSLQYLYL 458
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
+ N + ++ F L NL L ++ N L L
Sbjct: 459 EYNVIKEIKPLTFDALINLQLLFLNNNLLRSL 490
Score = 60 (26.2 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 32/129 (24%), Positives = 53/129 (41%)
Query: 329 FTNLTNLIELDISYNKL----DRLE-VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXX 383
FTN+++L S KL + L+ V D +E S DL GNN +
Sbjct: 368 FTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNN-RIAVIQEGAFTNL 426
Query: 384 XXXXXXIADMNYTDIP-KGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+ NY ++ +F LQ+L L N +++I L + + I L L L+ N
Sbjct: 427 TSLRRLYLNGNYLEVLYPAMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNL 486
Query: 443 FKGFDEKSY 451
+ + +
Sbjct: 487 LRSLPDNIF 495
>TAIR|locus:2091353 [details] [associations]
symbol:AT3G28040 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0002237 "response to molecule of bacterial origin"
evidence=RCA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0048443 "stamen development" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004672 HOGENOM:HOG000116551
InterPro:IPR013210 Pfam:PF08263 EMBL:AB028616 EMBL:FJ708729
IPI:IPI00540962 RefSeq:NP_189443.2 UniGene:At.28161
ProteinModelPortal:Q9LRT1 SMR:Q9LRT1 PaxDb:Q9LRT1 PRIDE:Q9LRT1
EnsemblPlants:AT3G28040.1 GeneID:822428 KEGG:ath:AT3G28040
GeneFarm:2365 TAIR:At3g28040 InParanoid:Q9LRT1 OMA:CTSQIPS
PhylomeDB:Q9LRT1 ProtClustDB:CLSN2680201 Uniprot:Q9LRT1
Length = 1016
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 80/340 (23%), Positives = 127/340 (37%)
Query: 114 QQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLD 173
Q+ Q L+ L ++N+ + L+ L+L+HNN++ + + + +LQ L L
Sbjct: 98 QKLQRLKVLSLSNNNFTG-NINALSNNNHLQKLDLSHNNLSGQIPSSLGSITSLQHLDLT 156
Query: 174 FNKIE-SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEI 232
N ++ +F + S LR LSL+HN + P N NP
Sbjct: 157 GNSFSGTLSDDLFNNCSSLRYLSLSHNHLEGQIPSTLFRCSVLNSLNLSRNRFSG-NPSF 215
Query: 233 FKDI---QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXX 289
I + L+ S L P+ L +L L L NQ
Sbjct: 216 VSGIWRLERLRALDLSSNSLSGSIPLGILSLHNLKELQLQRNQFSGALPSDIGLCPHLNR 275
Query: 290 XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLE 349
NHF L ++ L + N L+ ++T L+ LD S N+L
Sbjct: 276 VDLSSNHFSGELPRTLQKLKSLNHFDVSNNLLSGDFPPWIGDMTGLVHLDFSSNELTGKL 335
Query: 350 VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHL 409
+S + SL+DL +S N + + +IP G F + L
Sbjct: 336 PSSISNLR-SLKDLNLSENKLSGEVPESLESCKELMIVQLKGNDFSGNIPDGFFDLG--L 392
Query: 410 QFLNLSGNNLQDI----HNLLYQSNIKLTHLDLSRNKFKG 445
Q ++ SGN L + L++S I+L DLS N G
Sbjct: 393 QEMDFSGNGLTGSIPRGSSRLFESLIRL---DLSHNSLTG 429
>UNIPROTKB|Q68Y56 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9823 "Sus
scrofa" [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA] [GO:0050829
"defense response to Gram-negative bacterium" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0042116 "macrophage activation" evidence=IEA] [GO:0034142
"toll-like receptor 4 signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0006954 InterPro:IPR000483 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0004888 GO:GO:0046696 SUPFAM:SSF52200
GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 eggNOG:NOG249751 HOGENOM:HOG000037951
OrthoDB:EOG4P8FHQ EMBL:AB188301 UniGene:Ssc.19703
ProteinModelPortal:Q68Y56 SMR:Q68Y56 STRING:Q68Y56 Uniprot:Q68Y56
Length = 841
Score = 120 (47.3 bits), Expect = 0.00081, P = 0.00081
Identities = 50/199 (25%), Positives = 88/199 (44%)
Query: 79 MANPIPIGQMDLGTEVLKIVPSEENPNHL-TIGPIFQQFQHLEELHITNSFIPAIG--FH 135
+AN I + L L+ +P++ HL + QQF L+ + F+ H
Sbjct: 307 LANASVISLLSLNLHGLEALPNDFRWQHLEVVNCKLQQFPALK-FNSLKKFVFKDNKHMH 365
Query: 136 PFWGV--PSLRYLNLTHNNIT--SLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDL 191
F + P+L++L+L+ N+++ +N G L+ L L FN+I ++ S+ FM L L
Sbjct: 366 TFTEINLPNLQFLDLSGNHLSFKGCCSHNEFGTTKLKHLDLSFNEIITMKSN-FMGLEQL 424
Query: 192 RVLSLAHNRISKLAP-RXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLE 250
L H+ + + Y +I + IF + L+T K +
Sbjct: 425 EYLDFQHSSLKQANDFSIFLSLRNLHYLDISYTNIHVVFRGIFAGLVSLQTLKMAGNSFQ 484
Query: 251 N-INPMMYSILADLIYLDL 268
N + P +++ L +LI LDL
Sbjct: 485 NNLLPDVFTDLTNLILLDL 503
Score = 109 (43.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 42/173 (24%), Positives = 73/173 (42%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYNKLDRLEVASFDPIE 357
+ ++ +F +L+ L + + L + + F +L NL LDISY + + F +
Sbjct: 412 ITMKSNFMGLEQLEYLDFQHSSLKQANDFSIFLSLRNLHYLDISYTNIHVVFRGIFAGLV 471
Query: 358 NSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
SL+ LK++GN+ Q ++ + + F P LQ LN+S N
Sbjct: 472 -SLQTLKMAGNSFQNNLLPDVFTDLTNLILLDLSKCQLEQVSQRAFHSLPRLQVLNMSHN 530
Query: 418 NLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIH--KAAKNSFA 468
L + L Y+ L LD S N E+ + P+++ KN F+
Sbjct: 531 RLLFLDTLPYKPLHSLRILDCSYNLIVASKEQE-LQHLPRSLAFLNLTKNDFS 582
Score = 103 (41.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
+Q +L L +T + I ++ F G+PSL+ L N+ SL D+ + L EL +
Sbjct: 98 YQGLNYLSTLILTGNPIQSLALGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLNELNV 157
Query: 173 DFNKIESIP-SSVFMHLSDLRVLSLAHNRISKL 204
N I S F +L +L L L+ N+I +
Sbjct: 158 AHNHIHSFKLPEYFSNLPNLEHLDLSKNKIENI 190
Score = 95 (38.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F F L+ L ++ I I + G+ L L LT N I SL F G+ +LQ+L
Sbjct: 74 FSSFPELQVLDLSRCEIQTIDDDAYQGLNYLSTLILTGNPIQSLALGAFSGLPSLQKLVA 133
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
+ S+ HL L L++AHN I
Sbjct: 134 VETNLASLEDFPIGHLKTLNELNVAHNHI 162
Score = 86 (35.3 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 34/155 (21%), Positives = 62/155 (40%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L ++ +++ + + F P L+ L+L+ I ++ D ++G+ L L L N I+S+
Sbjct: 59 LDLSFNYLSHLDSNSFSSFPELQVLDLSRCEIQTIDDDAYQGLNYLSTLILTGNPIQSLA 118
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN-PEIFKDIQELK 240
F L L+ L ++ L +N I PE F ++ L+
Sbjct: 119 LGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLNELNVAHNHIHSFKLPEYFSNLPNLE 178
Query: 241 TFKCRSCGLENINPMMYSILADL----IYLDLGYN 271
+ENI +L + + LDL N
Sbjct: 179 HLDLSKNKIENIYHEHLQVLHQVPLHNLSLDLSLN 213
Score = 83 (34.3 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 407 PHLQFLNLSGNNLQD----IHNLLYQSNIKLTHLDLSRNK-------FKGFDEKSYIMSE 455
P+LQFL+LSGN+L HN KL HLDLS N+ F G ++ Y+ +
Sbjct: 373 PNLQFLDLSGNHLSFKGCCSHNEF--GTTKLKHLDLSFNEIITMKSNFMGLEQLEYLDFQ 430
Query: 456 PKNIHKAAKNSFALQSSMGKNAEY 479
++ +A N F++ S+ +N Y
Sbjct: 431 HSSLKQA--NDFSIFLSL-RNLHY 451
Score = 63 (27.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 41/196 (20%), Positives = 79/196 (40%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDRG 68
+ +K LDLS+N + ++ F + +L + + A Y+ L
Sbjct: 54 TSVKILDLSFNYLSHLDSNSFSSFPELQVLDLSRCEIQTIDDDAYQGLNYLSTLILT--- 110
Query: 69 RYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSF 128
G+ + +G + K+V E N L PI + L EL++ ++
Sbjct: 111 --------GNPIQSLALGAFSGLPSLQKLVAVETNLASLEDFPI-GHLKTLNELNVAHNH 161
Query: 129 IPAIGFHPFWG-VPSLRYLNLTHNNITSLLDYNFKGM--MNLQELYLDF--NKIESIPSS 183
I + ++ +P+L +L+L+ N I ++ + + + + L L LD N + I
Sbjct: 162 IHSFKLPEYFSNLPNLEHLDLSKNKIENIYHEHLQVLHQVPLHNLSLDLSLNPLNFIEPG 221
Query: 184 VFMHLSDLRVLSLAHN 199
F + L L+L N
Sbjct: 222 AFNKIR-LNGLTLRSN 236
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 75/325 (23%), Positives = 124/325 (38%)
Query: 35 TTMLFQVTIFLYLLHSS-ASVM-CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGT 92
T L V +++ +H+ A V CP C C +R ++C R + IP +
Sbjct: 2 THSLLSVILWVPHVHAVWACVRSCPANCVCT-QERS-CSVLCDRAGLGQ-IP---SEFPC 55
Query: 93 EVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNN 152
E I + + L+ F L+ L + ++ I I F G+PSL L + HN
Sbjct: 56 EASSINLDKNSIKFLS-ERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLTELKMAHNE 114
Query: 153 -ITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXX 211
I L F + L +L L + +IP +F+ L L+ L N ++ P
Sbjct: 115 YIRYLHTRTFTALRRLVKLDLADCNLFNIPDRIFIELPSLQELFCFQNNFRRI-PGAIRG 173
Query: 212 XXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
N I + + + +LK + + ++ + + YL L N
Sbjct: 174 MENLTHVYLERNRIEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDN 233
Query: 272 QXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTN 331
GN + F +L+VL L RNR+ + AF N
Sbjct: 234 LISELPENSFDGLRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFEN 293
Query: 332 LTNLIELDISYNKLDRLEVASFDPI 356
LT+L+ L ++ N L L + F P+
Sbjct: 294 LTSLVSLHLNSNNLTTLPFSVFQPV 318
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 59/260 (22%), Positives = 113/260 (43%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQV-TIFLYLLHSSASVMCPYMCECALDD 66
+ LKSL L++N+I I P FK + T L ++ LH+ + + L D
Sbjct: 78 LPSLKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYLHTRTFTALRRLVKLDLAD 137
Query: 67 RGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITN 126
C ++ N IP ++ + L+ + +N N I + ++L +++
Sbjct: 138 -------C---NLFN-IP-DRIFIELPSLQELFCFQN-NFRRIPGAIRGMENLTHVYLER 184
Query: 127 SFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFM 186
+ I A+ ++ G+ L+YLNL N I + + F+G ++ LYL+ N I +P + F
Sbjct: 185 NRIEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDNLISELPENSFD 244
Query: 187 HLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRS 246
L L++L+L N + ++ N I I F+++ L + S
Sbjct: 245 GLRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFENLTSLVSLHLNS 304
Query: 247 CGLENINPMMYSILADLIYL 266
N+ + +S+ + +L
Sbjct: 305 ---NNLTTLPFSVFQPVYFL 321
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 64/275 (23%), Positives = 101/275 (36%)
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE-INP 230
LD N I+ + F L L+ LSL HN IS + P +N+ + ++
Sbjct: 62 LDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYLHT 121
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
F ++ L C L NI ++ L L L N
Sbjct: 122 RTFTALRRLVKLDLADCNLFNIPDRIFIELPSLQELFCFQNNFRRIPGAIRGMENLTHVY 181
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
N + S KL+ L L+ NR+ V AF + L ++ N + L
Sbjct: 182 LER-NRIEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDNLISELPE 240
Query: 351 ASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIAD-MNYTDIPKGLFKMNPHL 409
SFD + L+ L + GN ++ + +NY I +G F+ L
Sbjct: 241 NSFDGLR-CLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINY--IEEGAFENLTSL 297
Query: 410 QFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
L+L+ NNL + ++Q L L L RN ++
Sbjct: 298 VSLHLNSNNLTTLPFSVFQPVYFLGRLYLFRNPWE 332
>UNIPROTKB|Q9HBX9 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007188
"adenylate cyclase-modulating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007567 "parturition" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0042562
"hormone binding" evidence=IEA] [GO:0060427 "lung connective tissue
development" evidence=IEA] [GO:0060658 "nipple morphogenesis"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068
PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0030154 GO:GO:0046872
GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 EMBL:CH471056
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 EMBL:AF190500 EMBL:AY899848 EMBL:AY899849
EMBL:AY899850 EMBL:AK300379 EMBL:BC112142 EMBL:BC113617
IPI:IPI00012456 IPI:IPI00219888 IPI:IPI00654878 IPI:IPI00876893
RefSeq:NP_001240657.1 RefSeq:NP_001240658.1 RefSeq:NP_067647.2
UniGene:Hs.591686 PDB:2JM4 PDBsum:2JM4 ProteinModelPortal:Q9HBX9
SMR:Q9HBX9 MINT:MINT-231156 STRING:Q9HBX9 PhosphoSite:Q9HBX9
DMDM:166209887 PRIDE:Q9HBX9 DNASU:59350 Ensembl:ENST00000307765
Ensembl:ENST00000343542 Ensembl:ENST00000423548
Ensembl:ENST00000470033 Ensembl:ENST00000471616 GeneID:59350
KEGG:hsa:59350 UCSC:uc003ipz.3 UCSC:uc010iqm.3 UCSC:uc010iqo.3
CTD:59350 GeneCards:GC04P159236 H-InvDB:HIX0024561 HGNC:HGNC:19718
HPA:HPA027067 MIM:606654 neXtProt:NX_Q9HBX9 PharmGKB:PA134868312
HOVERGEN:HBG026354 InParanoid:Q9HBX9 KO:K04306 OMA:YTLTTRP
PhylomeDB:Q9HBX9 ChEMBL:CHEMBL1293316 EvolutionaryTrace:Q9HBX9
GenomeRNAi:59350 NextBio:65261 ArrayExpress:Q9HBX9 Bgee:Q9HBX9
CleanEx:HS_RXFP1 Genevestigator:Q9HBX9 GermOnline:ENSG00000171509
GO:GO:0060658 Uniprot:Q9HBX9
Length = 757
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 61/230 (26%), Positives = 95/230 (41%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
++L N I L FK +LQ+LYL NKI SI F L+ L L L+HNRI+ L
Sbjct: 131 MSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLK 190
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENI-NPMMYSILADLI 264
P N + I+P F + L + L + + + + L
Sbjct: 191 PGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLH 250
Query: 265 YLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKV 324
+LDL N N + E +F+ KL L L N++ +
Sbjct: 251 WLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENL 310
Query: 325 TTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISG---NNIQ 371
F +L L +L++SYN + +++ FD + L+ L + G +NIQ
Sbjct: 311 PPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVK-LKSLSLEGIEISNIQ 359
Score = 158 (60.7 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 52/207 (25%), Positives = 85/207 (41%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
N+ + L +N I +P F + DL+ L L +N+I+ ++ +N I
Sbjct: 127 NVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRI 186
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXX 285
+ P +F+D+ L+ L I+P + L LI L L N
Sbjct: 187 TFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHM 246
Query: 286 XXXX-XXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNK 344
GNH + +F S L VL +++N++ + F L L ELD+ NK
Sbjct: 247 PRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNK 306
Query: 345 LDRLEVASFDPIENSLRDLKISGNNIQ 371
++ L F ++ L L +S N IQ
Sbjct: 307 IENLPPLIFKDLKE-LSQLNLSYNPIQ 332
Score = 137 (53.3 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 53/224 (23%), Positives = 89/224 (39%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F+ + L++L++ N+ I +I + F G+ SL L L+HN IT L F+ + L+ L +
Sbjct: 146 FKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLII 205
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXY-NDIVEINPE 231
+ N + I F L+ L +L L +N +++L + N I +
Sbjct: 206 EDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNL 265
Query: 232 IFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXX 291
F L R + ++N ++ L L LDLG N+
Sbjct: 266 TFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLN 325
Query: 292 XXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNL 335
N I F KL+ L L+ ++ + F L NL
Sbjct: 326 LSYNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNL 369
Score = 132 (51.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 45/165 (27%), Positives = 69/165 (41%)
Query: 105 NHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWG-VPSLRYLNLTHNNITSLLDYNF 161
NHL+ I P F L L + N+ + + P +P L +L+L N+I +L + F
Sbjct: 208 NHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTF 267
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
NL L + NKI + + F L L L L N+I L P
Sbjct: 268 ISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLS 327
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
YN I +I F + +LK+ + NI M+ L +L ++
Sbjct: 328 YNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHI 372
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 38/148 (25%), Positives = 72/148 (48%)
Query: 305 FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLK 364
F + LQ L L+ N++ ++ AF L +L +L +S+N++ L+ F+ + L L
Sbjct: 146 FKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHR-LEWLI 204
Query: 365 ISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIP-KGLFKMNPHLQFLNLSGNNLQDIH 423
I N++ + ++ T +P K L + P L +L+L GN++ ++
Sbjct: 205 IEDNHLSRISPPTFYGLNSLILLVLMNNV-LTRLPDKPLCQHMPRLHWLDLEGNHIHNLR 263
Query: 424 NLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
NL + S LT L + +NK +E ++
Sbjct: 264 NLTFISCSNLTVLVMRKNKINHLNENTF 291
Score = 130 (50.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 47/167 (28%), Positives = 74/167 (44%)
Query: 105 NHLT-IGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNF- 161
N +T + P +F+ LE L I ++ + I F+G+ SL L L +N +T L D
Sbjct: 184 NRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLC 243
Query: 162 KGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXX 221
+ M L L L+ N I ++ + F+ S+L VL + N+I+ L
Sbjct: 244 QHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLG 303
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDL 268
N I + P IFKD++EL ++ I + L L L L
Sbjct: 304 SNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSL 350
Score = 120 (47.3 bits), Expect = 0.00071, P = 0.00071
Identities = 44/217 (20%), Positives = 82/217 (37%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRIS 202
L+ L L +N ITS+ Y F+G+ +L +LYL N+I + VF L L L + N +S
Sbjct: 152 LQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLS 211
Query: 203 KLAPRXXXXXXXXXXXXXXYNDIVEI-NPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
+++P N + + + + + + L + N+ + + +
Sbjct: 212 RISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFISCS 271
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L L + N+ N + F +L L L N +
Sbjct: 272 NLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPI 331
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
K+ F L L L + ++ ++ F P+ N
Sbjct: 332 QKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMN 368
Score = 47 (21.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDI 32
++ L L LS+N I + P +F+D+
Sbjct: 173 LNSLTKLYLSHNRITFLKPGVFEDL 197
>UNIPROTKB|F1NDB4 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
GO:GO:0010628 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 OMA:CCGNGWL EMBL:AADN02059354
IPI:IPI00584082 Ensembl:ENSGALT00000001192 Uniprot:F1NDB4
Length = 640
Score = 161 (61.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 80/317 (25%), Positives = 129/317 (40%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNR 200
P++ ++L+ N I S+ D +LQ L L N+I I VF H++ L ++LA+N
Sbjct: 15 PNVNKIDLSGNLIQSIPDMPLPFYTSLQCLDLSSNQISFITPGVFAHMTSLLEINLANNN 74
Query: 201 ISKLAPRXXXXXXXX---XXXXXXYNDIVEINPEIF-KDIQELKTFKCRSCGLENINPMM 256
+ +LA +N + E F K L+ + I+ M
Sbjct: 75 LYELAQTGTEGIGFLPKVEILDLSHNSLYNGMAEYFIKRAPALRYLSLAGNSIIMISHKM 134
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ +L+ +DL N N I + F+ + +L++L L
Sbjct: 135 FQGSPNLVEIDLQSNIIMEIEEGAFETLLNLSRLNLSMNSITCISD--FNLR-QLEILDL 191
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXX 376
RN + TT + +L LD+S NKL R V F P N L L +S N IQ
Sbjct: 192 SRNSIESFHTTESDDEYSLKCLDLSENKLLRFPV--F-PQVNKLVTLNLSKNLIQLTAES 248
Query: 377 XXXXXXXXXXXXXIADMNYTDIPKGLFK--MN-PHLQFLNLSGNNLQDIHNLLYQSNIKL 433
A + D + K +N HL +L+LS N ++ I + ++S L
Sbjct: 249 SRNKMNYMENEWLDAPFHLLDQKQSRNKSSLNLSHLAYLDLSYNEIKSIPDEFFESMFSL 308
Query: 434 THLDLSRNKFKGFDEKS 450
L+LS+N + F+ S
Sbjct: 309 HTLNLSKNCLQTFEVTS 325
Score = 129 (50.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 90/377 (23%), Positives = 148/377 (39%)
Query: 2 EFTLIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIF---LYLLHSSASVMCPY 58
+ L F + L+ LDLS N I I P +F + T L ++ + LY L + + +
Sbjct: 32 DMPLPFYTSLQCLDLSSNQISFITPGVFAHM---TSLLEINLANNNLYELAQTGTEGIGF 88
Query: 59 MCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQH 118
+ + + D + G MA I + L+ + N + +FQ +
Sbjct: 89 LPKVEILDLSHNSLY--NG-MAEYF-IKR----APALRYLSLAGNSIIMISHKMFQGSPN 140
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
L E+ + ++ I I F + +L LNL+ N+IT + D+N + L+ L L N IE
Sbjct: 141 LVEIDLQSNIIMEIEEGAFETLLNLSRLNLSMNSITCISDFNLR---QLEILDLSRNSIE 197
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
S ++ L+ L L+ N++ + P +++++ E ++
Sbjct: 198 SFHTTESDDEYSLKCLDLSENKLLRF-PVFPQVNKLVTLNLS--KNLIQLTAESSRNKMN 254
Query: 239 LKTFKCRSCGLENINPMMY----SI-LADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXX 293
+ ++ S+ L+ L YLDL YN+
Sbjct: 255 YMENEWLDAPFHLLDQKQSRNKSSLNLSHLAYLDLSYNEIKSIPDEFFESMFSLHTLNLS 314
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
N S S+ L VL L N L + A T L NL EL I N L L+ F
Sbjct: 315 KNCLQTFEVTSDSTLVSLTVLDLSYNALQSLLLHADT-LLNLKELYIQNNHLQVLQFDIF 373
Query: 354 DPIENSLRDLKISGNNI 370
+ SLR L + NNI
Sbjct: 374 SRL-TSLRWLNLQSNNI 389
>RGD|620810 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0050771
"negative regulation of axonogenesis" evidence=TAS]
InterPro:IPR001611 PROSITE:PS51450 RGD:620810 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GO:GO:0050771 GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 OrthoDB:EOG4MGS7M
EMBL:AY028438 EMBL:AF462390 IPI:IPI00197503 RefSeq:NP_446065.1
UniGene:Rn.229952 PDB:3KJ4 PDBsum:3KJ4 ProteinModelPortal:Q99M75
SMR:Q99M75 MINT:MINT-243866 STRING:Q99M75
Ensembl:ENSRNOT00000051037 GeneID:113912 KEGG:rno:113912
InParanoid:Q99M75 EvolutionaryTrace:Q99M75 NextBio:618010
Genevestigator:Q99M75 GermOnline:ENSRNOG00000030920 Uniprot:Q99M75
Length = 473
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 50/202 (24%), Positives = 83/202 (41%)
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN-DIV 226
Q ++L N+I +P++ F +L +L L N ++ + N +
Sbjct: 60 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 119
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
++P F+ + L T CGL+ + P ++ LA L YL L N
Sbjct: 120 VVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGN 179
Query: 287 XXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
GN P + E +F L L L +N +A+V AF +L L+ L + N L
Sbjct: 180 LTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS 239
Query: 347 RLEVASFDPIENSLRDLKISGN 368
L P+ SL+ L+++ N
Sbjct: 240 MLPAEVLVPLR-SLQYLRLNDN 260
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 39/151 (25%), Positives = 69/151 (45%)
Query: 91 GTEVLKIVPSEENPNHLTIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
G +L+ + +N + P F+ HL LH+ + +G F G+ +L+YL L
Sbjct: 103 GLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 162
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
NN+ +L D F+ + NL L+L N+I S+P F L L L L N ++++ P
Sbjct: 163 DNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAF 222
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
N++ + E+ ++ L+
Sbjct: 223 RDLGRLMTLYLFANNLSMLPAEVLVPLRSLQ 253
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 40/154 (25%), Positives = 66/154 (42%)
Query: 119 LEELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKI 177
LE+L ++ N+ + + F G+ L L+L + L F+G+ LQ LYL N +
Sbjct: 107 LEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNL 166
Query: 178 ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQ 237
+++P + F L +L L L NRI + N + ++P F+D+
Sbjct: 167 QALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLG 226
Query: 238 ELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
L T + L + + L L YL L N
Sbjct: 227 RLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 260
>MGI|MGI:2136886 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2136886
GO:GO:0005783 GO:GO:0005886 GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 EMBL:AF283462 EMBL:BC052317
EMBL:BC058381 IPI:IPI00121067 RefSeq:NP_075358.1 UniGene:Mm.40149
ProteinModelPortal:Q99PI8 SMR:Q99PI8 MINT:MINT-188355 STRING:Q99PI8
PRIDE:Q99PI8 Ensembl:ENSMUST00000059589 GeneID:65079 KEGG:mmu:65079
UCSC:uc007ymv.1 InParanoid:Q99PI8 OMA:PLWAWLQ OrthoDB:EOG4MGS7M
NextBio:320259 Bgee:Q99PI8 CleanEx:MM_RTN4R Genevestigator:Q99PI8
GermOnline:ENSMUSG00000043811 Uniprot:Q99PI8
Length = 473
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 50/202 (24%), Positives = 82/202 (40%)
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN-DIV 226
Q ++L N+I +P++ F +L +L L N ++++ N +
Sbjct: 60 QRIFLHGNRISHVPAASFQSCRNLTILWLHSNALARIDAAAFTGLTLLEQLDLSDNAQLH 119
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
++P F + L T CGL + P ++ LA L YL L N
Sbjct: 120 VVDPTTFHGLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGN 179
Query: 287 XXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
GN P + E +F L L L +N +A+V AF +L L+ L + N L
Sbjct: 180 LTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS 239
Query: 347 RLEVASFDPIENSLRDLKISGN 368
L P+ SL+ L+++ N
Sbjct: 240 MLPAEVLMPLR-SLQYLRLNDN 260
Score = 147 (56.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 39/151 (25%), Positives = 68/151 (45%)
Query: 91 GTEVLKIVPSEENPNHLTIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
G +L+ + +N + P F HL LH+ + +G F G+ +L+YL L
Sbjct: 103 GLTLLEQLDLSDNAQLHVVDPTTFHGLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQ 162
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXX 209
NN+ +L D F+ + NL L+L N+I S+P F L L L L N ++++ P
Sbjct: 163 DNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAF 222
Query: 210 XXXXXXXXXXXXYNDIVEINPEIFKDIQELK 240
N++ + E+ ++ L+
Sbjct: 223 RDLGRLMTLYLFANNLSMLPAEVLMPLRSLQ 253
Score = 127 (49.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 40/154 (25%), Positives = 66/154 (42%)
Query: 119 LEELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKI 177
LE+L ++ N+ + + F G+ L L+L + L F+G+ LQ LYL N +
Sbjct: 107 LEQLDLSDNAQLHVVDPTTFHGLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNNL 166
Query: 178 ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQ 237
+++P + F L +L L L NRI + N + ++P F+D+
Sbjct: 167 QALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLG 226
Query: 238 ELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
L T + L + + L L YL L N
Sbjct: 227 RLMTLYLFANNLSMLPAEVLMPLRSLQYLRLNDN 260
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 153 (58.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 51/172 (29%), Positives = 86/172 (50%)
Query: 38 LFQVTIFLYLLHSSASVM---CPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEV 94
LF +++ L LL + V CP +C C+ +++C R + + +P G + T
Sbjct: 27 LFVLSLALQLLVVAGLVRAQTCPSVCSCSNQFS---KVICTRRGLRD-VPDG-ISTNTRY 81
Query: 95 LKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNIT 154
L + +EN + F+ +HLE L ++ + I I F G+ +L L L N +T
Sbjct: 82 LNL---QENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLT 138
Query: 155 SLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH-NRISKLA 205
++ + F+ + L+EL+L N IESIPS F + LR L L R+S ++
Sbjct: 139 TIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYIS 190
Score = 146 (56.5 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 55/217 (25%), Positives = 89/217 (41%)
Query: 144 RYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
RYLNL N I + +FK + +L+ L L N I +I F L++L L L NR++
Sbjct: 80 RYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTT 139
Query: 204 LAPRXXXXXXXXXXXXXXYNDIVEINPEI-FKDIQELKTFKCRSCG-LENINPMMYSILA 261
+ P N+ +E P F + L+ L I+ + L+
Sbjct: 140 I-PNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLS 198
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRL 321
+L YL+LG GN +I SF LQ L + ++
Sbjct: 199 NLRYLNLG--MCNLKEIPNLIPLVRLDELEMSGNQLSIIRPGSFKGLVHLQKLWMMHAQI 256
Query: 322 AKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIEN 358
+ AF +L +L+EL++++N L L F P+ +
Sbjct: 257 QTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHH 293
Score = 53 (23.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 30/118 (25%), Positives = 47/118 (39%)
Query: 300 ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENS 359
I E +F L+ L L L ++ L L EL++S N+L + SF + +
Sbjct: 189 ISEGAFEGLSNLRYLNLGMCNLKEIPN--LIPLVRLDELEMSGNQLSIIRPGSFKGLVH- 245
Query: 360 LRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGN 417
L+ L + IQ +A N T +P LF HL+ ++L N
Sbjct: 246 LQKLWMMHAQIQTIERNAFDDLQSLVELN-LAHNNLTLLPHDLFTPLHHLERVHLHHN 302
>ZFIN|ZDB-GENE-041008-23 [details] [associations]
symbol:fmoda "fibromodulin a" species:7955 "Danio
rerio" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450
ZFIN:ZDB-GENE-041008-23 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000234447
HOVERGEN:HBG108061 PANTHER:PTHR24371:SF11 EMBL:BC096939
IPI:IPI00487287 RefSeq:NP_001025243.1 UniGene:Dr.133900
ProteinModelPortal:Q4V9E0 STRING:Q4V9E0 GeneID:791822
KEGG:dre:791822 CTD:791822 InParanoid:Q4V9E0 NextBio:20930800
Uniprot:Q4V9E0
Length = 342
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 63/236 (26%), Positives = 99/236 (41%)
Query: 140 VPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+PS ++Y+ L HN ITS+ D F NL + L N I S+ F LS+L L L +
Sbjct: 71 IPSRMKYVYLQHNQITSVPDNAFGNATNLVWVMLHENHINSVGKQAFAKLSNLNRLYLNN 130
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYS 258
N ++++ P +N I ++ P F+ ++ L L++I +
Sbjct: 131 NNLTEV-P--SNLPRSLRDLRLNHNKIGKLAPNAFEGMENLTILLLHHNSLQDIGVGLKG 187
Query: 259 ILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFK-LQVLCLK 317
L L LD+ NQ P +F +QF LQ +
Sbjct: 188 -LKSLTLLDVSRNQLKKVPESLPEMLHQLYLDSNSIGAVPA----NFLNQFSNLQYVRFA 242
Query: 318 RNRLAK--VTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
N L + F N + L+ELD+S+NKL+ + V S SL+ L + N I+
Sbjct: 243 HNELTNKGIPQNTFNN-SGLVELDLSFNKLESIPVVS-----TSLQHLYLQANQIK 292
Score = 126 (49.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 60/259 (23%), Positives = 109/259 (42%)
Query: 119 LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIE 178
++ +++ ++ I ++ + F +L ++ L N+I S+ F + NL LYL+ N +
Sbjct: 75 MKYVYLQHNQITSVPDNAFGNATNLVWVMLHENHINSVGKQAFAKLSNLNRLYLNNNNLT 134
Query: 179 SIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQE 238
+PS++ L DLR L HN+I KLAP +N + +I + K ++
Sbjct: 135 EVPSNLPRSLRDLR---LNHNKIGKLAPNAFEGMENLTILLLHHNSLQDIGVGL-KGLKS 190
Query: 239 LKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFP 298
L L+ + + +L L YLD N N
Sbjct: 191 LTLLDVSRNQLKKVPESLPEMLHQL-YLDS--NSIGAVPANFLNQFSNLQYVRFAHNELT 247
Query: 299 V--ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF--- 353
I + +F++ ++ L L N+L + + T+L L + N++ + SF
Sbjct: 248 NKGIPQNTFNNSGLVE-LDLSFNKLESIPVVS----TSLQHLYLQANQIKEFTLGSFCSV 302
Query: 354 -DPIENS-LRDLKISGNNI 370
D + S LR L++ GN I
Sbjct: 303 VDVMNFSRLRVLRLEGNEI 321
>MGI|MGI:2679448 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0007625 "grooming
behavior" evidence=IMP] [GO:0009410 "response to xenobiotic
stimulus" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0021756
"striatum development" evidence=IMP] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0043588 "skin development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0072358
"cardiovascular system development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2679448 GO:GO:0016021
GO:GO:0043588 GO:GO:0007268 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0048813 GO:GO:0007409
GO:GO:0030534 GO:GO:0009410 InterPro:IPR000372 SMART:SM00013
GO:GO:0007625 GO:GO:0021756 GO:GO:0072358 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 eggNOG:NOG147171
CTD:26050 OMA:HHRGPAL OrthoDB:EOG4X97GH EMBL:AB097574 EMBL:BC065107
EMBL:AK011457 IPI:IPI00329844 IPI:IPI00410889 RefSeq:NP_942565.1
UniGene:Mm.235097 UniGene:Mm.417152 ProteinModelPortal:Q810B7
SMR:Q810B7 STRING:Q810B7 PhosphoSite:Q810B7 PRIDE:Q810B7
Ensembl:ENSMUST00000042767 GeneID:75409 KEGG:mmu:75409
UCSC:uc011zpr.1 InParanoid:Q810B7 NextBio:342932 Bgee:Q810B7
CleanEx:MM_SLITRK5 Genevestigator:Q810B7
GermOnline:ENSMUSG00000033214 Uniprot:Q810B7
Length = 957
Score = 117 (46.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 48/157 (30%), Positives = 70/157 (44%)
Query: 55 MCPYMCECALDDRGRYEIVCR-RG-----DMANP-IPIGQMDLGTEVLKIVPSEENPNHL 107
+C C C D G + C RG +++ P PI + L +L S PN
Sbjct: 47 ICDNACPCEEKD-GILTVSCENRGIISLSEISPPRFPIYHLLLSGNLL----SRLYPNE- 100
Query: 108 TIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNL 167
F + LH+ ++ I I F G+ LR L+L +N + L D F G+ NL
Sbjct: 101 -----FVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENL 155
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
+ L +D+N I I + F L L+VL L N +S L
Sbjct: 156 EYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLLSGL 192
Score = 102 (41.0 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN-LQELY 171
F + L LH+ N+ + + F G+ +L YL + +N I S+++ N G ++ LQ L
Sbjct: 125 FHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI-SVIEPNAFGKLHMLQVLI 183
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L+ N + +P+++F + L L L NR+ KL P
Sbjct: 184 LNDNLLSGLPNNLFRFVP-LTHLDLRGNRL-KLLP 216
Score = 95 (38.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I +++F L+ L L NR+ +++ F L +L L + YN + ++ +FD
Sbjct: 443 NRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQAGTFD 502
Query: 355 PIENSLRDLKISGNNIQ 371
P+ N L+ L ++ N +Q
Sbjct: 503 PVPN-LQLLFLNNNQLQ 518
Score = 95 (38.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 34/128 (26%), Positives = 56/128 (43%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L N + V T F T L L + N++ ++ +F + N LR L ++GN I+
Sbjct: 416 LTENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGN-LRRLYLNGNRIERLSP 474
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
++ +I G F P+LQ L L+ N LQ + + ++ S + L
Sbjct: 475 ELFYGLQSLQYLFLQYNL-IREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVF-SGLTLLR 532
Query: 436 LDLSRNKF 443
L+L N F
Sbjct: 533 LNLRGNSF 540
Score = 84 (34.6 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 38/161 (23%), Positives = 71/161 (44%)
Query: 46 YLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPN 105
++L + A + + CA + Y +C D N P + D G +L + S EN
Sbjct: 21 WMLQTLAFAVTSLVLSCA-ETIDYYGEIC---D--NACPCEEKD-G--ILTV--SCENRG 69
Query: 106 HLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMM 165
+++ I + L ++ + + + + F L+L N I + F G+
Sbjct: 70 IISLSEISPPRFPIYHLLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLR 129
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L+ L+L+ NK+E + F+ L +L L + +N IS + P
Sbjct: 130 GLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEP 170
Score = 54 (24.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN + + F LQ L L+ N + ++ F + NL L ++ N+L + F
Sbjct: 466 GNRIERLSPELFYGLQSLQYLFLQYNLIREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVF 525
Query: 354 DPIENSLRDLKISGNN 369
+ +L L + GN+
Sbjct: 526 SGL--TLLRLNLRGNS 539
>UNIPROTKB|B3KTY4 [details] [associations]
symbol:SLITRK2 "cDNA FLJ38959 fis, clone NT2RI2000167,
highly similar to SLIT and NTRK-like protein 2" species:9606 "Homo
sapiens" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL109653 IPI:IPI00410358
RefSeq:NP_001137478.1 RefSeq:NP_001137480.1 RefSeq:NP_001137481.1
RefSeq:NP_001137482.1 RefSeq:NP_115928.1 UniGene:Hs.320368
GeneID:84631 KEGG:hsa:84631 CTD:84631 HGNC:HGNC:13449
PharmGKB:PA134968225 ChiTaRS:SLITRK2 GenomeRNAi:84631 NextBio:74551
OrthoDB:EOG4GTKC9 EMBL:AK096278 EMBL:CH471175 SMR:B3KTY4
STRING:B3KTY4 Ensembl:ENST00000335565 Uniprot:B3KTY4
Length = 724
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 46/166 (27%), Positives = 72/166 (43%)
Query: 43 IFLYLLHSSASVMCPYMCECALD--DRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPS 100
I +Y S + CP C C D G + C+ N + + L +
Sbjct: 327 IMVYQTKSPVPLTCPSSCVCTSQSSDNG-LNVNCQERKFTNISDLQPKPTSPKKLYLTG- 384
Query: 101 EENPNHL-TIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLD 158
N+L T+ ++ L+ LH+ N+ I I F + SLR L L N + L
Sbjct: 385 ----NYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYP 440
Query: 159 YNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ +LQ LYL++N I+ I F L +L++L L +N + L
Sbjct: 441 SMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSL 486
Score = 116 (45.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 103 NPNHLT-IGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N LT + P F + + LH+ N+ + I F G+ +L+ L+L +N + L +
Sbjct: 70 NGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDT 129
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ +L+ L D+N I +I + F L+ L+VL L N + L
Sbjct: 130 FLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSL 173
Score = 104 (41.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 30/94 (31%), Positives = 50/94 (53%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F + L+ LH+ N+ + + F G+ SL YL +N I+++ F + L+ L L
Sbjct: 106 FSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLIL 165
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ N + S+PS+VF + L L L NR+ K+ P
Sbjct: 166 NDNLLLSLPSNVFRFVL-LTHLDLRGNRL-KVMP 197
Score = 93 (37.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN+ + + L +L L NR+A + AFTNLT+L L ++ N L+ L + F
Sbjct: 384 GNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMF 443
Query: 354 DPIENSLRDLKISGNNIQ 371
D ++ SL+ L + N I+
Sbjct: 444 DGLQ-SLQYLYLEYNVIK 460
Score = 86 (35.3 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 102 ENPNHLTIGPIFQQFQH-LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
EN T+ + Q Q+ + +L + + + + + F + L+L +N + +
Sbjct: 47 ENKGFTTVS-LLQPPQYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGA 105
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ L+ L+L+ NK+E + F+ L L L +N IS +
Sbjct: 106 FSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYISAI 149
Score = 75 (31.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 31/127 (24%), Positives = 49/127 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L N +T L F N L+L N ++ I + F L L+ L L +N++ L
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILR 126
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN I I F + +LK L ++ ++ + L +
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTH 185
Query: 266 LDLGYNQ 272
LDL N+
Sbjct: 186 LDLRGNR 192
Score = 70 (29.7 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N VI E +F++ L+ L L N L + + F L +L L + YN + ++ +FD
Sbjct: 409 NRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFD 468
Query: 355 PIENSLRDLKISGN 368
+ N L+ L ++ N
Sbjct: 469 ALIN-LQLLFLNNN 481
Score = 62 (26.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 25/92 (27%), Positives = 36/92 (39%)
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
YS L DL++L G N+ GN+ V+ F LQ L L
Sbjct: 398 YSSL-DLLHL--GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYL 454
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
+ N + ++ F L NL L ++ N L L
Sbjct: 455 EYNVIKEIKPLTFDALINLQLLFLNNNLLRSL 486
Score = 60 (26.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 32/129 (24%), Positives = 53/129 (41%)
Query: 329 FTNLTNLIELDISYNKL----DRLE-VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXX 383
FTN+++L S KL + L+ V D +E S DL GNN +
Sbjct: 364 FTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNN-RIAVIQEGAFTNL 422
Query: 384 XXXXXXIADMNYTDIP-KGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+ NY ++ +F LQ+L L N +++I L + + I L L L+ N
Sbjct: 423 TSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNL 482
Query: 443 FKGFDEKSY 451
+ + +
Sbjct: 483 LRSLPDNIF 491
>UNIPROTKB|Q9WV82 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:10029
"Cricetulus griseus" [GO:0001875 "lipopolysaccharide receptor
activity" evidence=ISS] [GO:0032497 "detection of
lipopolysaccharide" evidence=ISS] [GO:0046696 "lipopolysaccharide
receptor complex" evidence=ISS] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR017241 InterPro:IPR027168
Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 GO:GO:0005622
InterPro:IPR025875 Pfam:PF12799 GO:GO:0004888 GO:GO:0046696
SUPFAM:SSF52200 GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 CTD:7099 EMBL:AF153676 RefSeq:NP_001233691.1
ProteinModelPortal:Q9WV82 SMR:Q9WV82 GeneID:100689329
Uniprot:Q9WV82
Length = 838
Score = 106 (42.4 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 44/151 (29%), Positives = 64/151 (42%)
Query: 108 TIGP-IFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMN 166
T+G F F L+ L ++ I I + G+ L L LT N I +L F G+ N
Sbjct: 67 TLGSHSFFNFPELKLLDLSRCEIETIEDKAYQGLHQLTTLILTGNPIQNLSKGTFSGLAN 126
Query: 167 LQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA-PRXXXXXXXXXXXXXXYNDI 225
LQ L K+ S+ S HL L+ L++AHN I P N I
Sbjct: 127 LQNLVAVEIKLASLDSLPIGHLVTLKKLNVAHNLIHSFKLPEYFSNLTNLEHLDLSNNYI 186
Query: 226 VEINPEIFKDIQELKTFKCRSCGLE-NINPM 255
I + D+Q L+ + LE ++NP+
Sbjct: 187 QTI---YYTDLQTLRENPQLNLSLELSLNPI 214
Score = 105 (42.0 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 45/175 (25%), Positives = 73/175 (41%)
Query: 299 VILEKSFSSQFKLQVLCLKRNRLAKVTT-TAFTNLTNLIELDISYN--KLDRLEVASFDP 355
+ + ++F +L+ L + + L K T + F L L+ LDISY K+D + F
Sbjct: 410 ISMSENFMGLEQLEYLDFQHSTLKKATEFSMFLPLEKLLYLDISYTNTKIDFNGI--FFG 467
Query: 356 IENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLS 415
+ SL LK++GN+ + I+ + G+F L+ LN+S
Sbjct: 468 L-TSLNTLKMAGNSFKDNILSNVFTNTTNLTFLDISKCQLQQVSWGVFDTLHRLELLNMS 526
Query: 416 GNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPKNIH--KAAKNSFA 468
NNL + Y+ L LD S N + K + PK++ N FA
Sbjct: 527 HNNLLLLDLFHYKQLHSLKTLDCSFNHIE--TSKGIMQHFPKSLAFLNLTNNPFA 579
Score = 101 (40.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 36/152 (23%), Positives = 68/152 (44%)
Query: 222 YNDIVEINPEIFKDIQELKTFKCRSCGLENINPM-MYSILADLIYLDLGYNQXXXXXXXX 280
+N ++ ++ E F +++L+ + L+ M+ L L+YLD+ Y
Sbjct: 406 FNGVISMS-ENFMGLEQLEYLDFQHSTLKKATEFSMFLPLEKLLYLDISYTNTKIDFNGI 464
Query: 281 XXXXXXXXXXXXXGNHFPV-ILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELD 339
GN F IL F++ L L + + +L +V+ F L L L+
Sbjct: 465 FFGLTSLNTLKMAGNSFKDNILSNVFTNTTNLTFLDISKCQLQQVSWGVFDTLHRLELLN 524
Query: 340 ISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
+S+N L L++ + + +SL+ L S N+I+
Sbjct: 525 MSHNNLLLLDLFHYKQL-HSLKTLDCSFNHIE 555
Score = 100 (40.3 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 30/121 (24%), Positives = 54/121 (44%)
Query: 123 HITNSFIP--AIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
H+ SF P +G H F+ P L+ L+L+ I ++ D ++G+ L L L N I+++
Sbjct: 57 HLDLSFNPLKTLGSHSFFNFPELKLLDLSRCEIETIEDKAYQGLHQLTTLILTGNPIQNL 116
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEIN-PEIFKDIQEL 239
F L++L+ L +++ L +N I PE F ++ L
Sbjct: 117 SKGTFSGLANLQNLVAVEIKLASLDSLPIGHLVTLKKLNVAHNLIHSFKLPEYFSNLTNL 176
Query: 240 K 240
+
Sbjct: 177 E 177
Score = 64 (27.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 19/106 (17%), Positives = 44/106 (41%)
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDI 225
+++ L L FN ++++ S F + +L++L L+ I + + N I
Sbjct: 54 SVKHLDLSFNPLKTLGSHSFFNFPELKLLDLSRCEIETIEDKAYQGLHQLTTLILTGNPI 113
Query: 226 VEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
++ F + L+ L +++ + L L L++ +N
Sbjct: 114 QNLSKGTFSGLANLQNLVAVEIKLASLDSLPIGHLVTLKKLNVAHN 159
Score = 61 (26.5 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 407 PHLQFLNLSGNNLQDIHNLLYQSNI---KLTHLDLSRN-------KFKGFDEKSYIMSEP 456
P L FL+LSGN + +++ L HLDLS N F G ++ Y+ +
Sbjct: 371 PSLTFLDLSGNGMS-FRGCCSYTDLGARSLKHLDLSFNGVISMSENFMGLEQLEYLDFQH 429
Query: 457 KNIHKAAKNSFAL 469
+ KA + S L
Sbjct: 430 STLKKATEFSMFL 442
Score = 42 (19.8 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 9 SKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
S +K LDLS+N + + F + + +L
Sbjct: 53 SSVKHLDLSFNPLKTLGSHSFFNFPELKLL 82
>TAIR|locus:2825389 [details] [associations]
symbol:RLP11 "AT1G71390" species:3702 "Arabidopsis
thaliana" [GO:0006952 "defense response" evidence=ISS] [GO:0007165
"signal transduction" evidence=IC] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0007154 "cell communication" evidence=RCA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=RCA] [GO:0009862
"systemic acquired resistance, salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=RCA]
[GO:0031348 "negative regulation of defense response" evidence=RCA]
[GO:0043069 "negative regulation of programmed cell death"
evidence=RCA] [GO:0050832 "defense response to fungus"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG4886 EMBL:AC016163
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263
HOGENOM:HOG000116562 ProtClustDB:CLSN2679241 IPI:IPI00517282
RefSeq:NP_177295.1 UniGene:At.52479 ProteinModelPortal:Q9C9H6
SMR:Q9C9H6 PRIDE:Q9C9H6 EnsemblPlants:AT1G71390.1 GeneID:843480
KEGG:ath:AT1G71390 TAIR:At1g71390 InParanoid:Q9C9H6 OMA:VEMSFER
PhylomeDB:Q9C9H6 Genevestigator:Q9C9H6 Uniprot:Q9C9H6
Length = 784
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 70/306 (22%), Positives = 118/306 (38%)
Query: 143 LRYLNLTHNNITSLLDYNFKGMMNLQELYL-DFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
L L L+ N + + Y+ + L+ L L D + I IPSS+ +LS L L L +N +
Sbjct: 128 LENLELSSNRLVGEIPYSIGNLKQLRNLSLGDNDLIGEIPSSLG-NLSLLLDLDLWNNSL 186
Query: 202 SKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILA 261
P N + P F ++ +L F+ ++ P S
Sbjct: 187 VGEVPASIGNLNELRVMSLDRNSLSGSIPISFTNLTKLSEFRIFFNNFTSL-PSDLSGFH 245
Query: 262 DLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILE-KSFSSQFKLQVLCLKRNR 320
+L+ D+ N N F +E + SS KLQ L L RN+
Sbjct: 246 NLVTFDISANSFSGHFPKFLFSIPSLAWVSMDRNQFSGPIEFANISSSSKLQNLILTRNK 305
Query: 321 LAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXX 380
L + + NL+ LD+++N + S + SLR S N ++
Sbjct: 306 LDGSIPESISKFLNLVLLDVAHNNISGPVPRSMSKLV-SLRIFGFSNNKLEGEVPSWLWR 364
Query: 381 XXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH-LDLS 439
++ +++ K ++ +Q L+LS N+ + + + +K H LDLS
Sbjct: 365 LSSTM----LSHNSFSSFEK-IYSKETMIQVLDLSFNSFRGTFPV-WICKLKGLHFLDLS 418
Query: 440 RNKFKG 445
N F G
Sbjct: 419 NNLFNG 424
Score = 130 (50.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 68/277 (24%), Positives = 107/277 (38%)
Query: 76 RGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPI-FQQFQHLEELHIT-NSFIPAIG 133
R ++ IPI T + K+ N+ T P F +L I+ NSF G
Sbjct: 207 RNSLSGSIPISF----TNLTKLSEFRIFFNNFTSLPSDLSGFHNLVTFDISANSFS---G 259
Query: 134 FHP--FWGVPSLRYLNLTHNNITSLLDY-NFKGMMNLQELYLDFNKIE-SIPSSVFMHLS 189
P + +PSL ++++ N + +++ N LQ L L NK++ SIP S+ L+
Sbjct: 260 HFPKFLFSIPSLAWVSMDRNQFSGPIEFANISSSSKLQNLILTRNKLDGSIPESISKFLN 319
Query: 190 DLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGL 249
L +L +AHN IS PR N ++ E+ + L +
Sbjct: 320 -LVLLDVAHNNISGPVPRSMSKLVSLRIFGFSNN---KLEGEVPSWLWRLSSTMLSHNSF 375
Query: 250 ENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQF 309
+ + YS + LDL +N N F + + F
Sbjct: 376 SSFEKI-YSKETMIQVLDLSFNSFRGTFPVWICKLKGLHFLDLSNNLFNGSIPLCLRN-F 433
Query: 310 KLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
L L L N+ + F N TNL LD+S N+L+
Sbjct: 434 NLTGLILGNNKFSGTLPDIFANNTNLQSLDVSGNQLE 470
Score = 79 (32.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 395 YTDIPKGLFKMNPHLQFLNLSGNNL-QDIHNLLYQSNIKLTHLDLSRNKFKG 445
Y +IP+ + + L+ LNLSGN DI + +++ KL LDLSRNK G
Sbjct: 611 YGEIPESIGCLE-ELRLLNLSGNAFTSDIPRV-WENLTKLETLDLSRNKLSG 660
Score = 46 (21.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 402 LFKMNPHLQFLNLSGNNLQ 420
+F N +LQ L++SGN L+
Sbjct: 452 IFANNTNLQSLDVSGNQLE 470
>UNIPROTKB|H3BQ49 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0005154 "epidermal growth factor receptor
binding" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] InterPro:IPR003591
SMART:SM00369 GO:GO:0043491 GO:GO:0031175 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715 HGNC:HGNC:21205
EMBL:AC046168 EMBL:AC105133 EMBL:AC110607 Ensembl:ENST00000561686
Bgee:H3BQ49 Uniprot:H3BQ49
Length = 179
Score = 136 (52.9 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 47/163 (28%), Positives = 77/163 (47%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVC-RRGDMANP--IPIGQ--MDLGTEVLKIVPSEENP 104
S ++ CP CEC+ DR ++C R+ +A P IP +DLG +K + +E
Sbjct: 30 SGSATGCPPRCECSAQDRA---VLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE-- 84
Query: 105 NHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGM 164
F F HLEEL + + + A+ F + +LR L L N + + F G+
Sbjct: 85 --------FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 136
Query: 165 MNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPR 207
NL +L + NKI + +F L +L+ L + N + ++ R
Sbjct: 137 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR 179
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 72/321 (22%), Positives = 126/321 (39%)
Query: 50 SSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHL-T 108
S ++ CP CEC + +R ++C R + + +P G + T +L + + N + T
Sbjct: 33 SGSATGCPSRCECNVQERS---VLCHRKKLMS-VPEG-IPSETRLLDL-----SKNRIKT 82
Query: 109 IGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNL 167
I P F F LEEL + + I AI F + L+ L L N + + F G+ NL
Sbjct: 83 INPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSNL 142
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE 227
+L + NKI + +F L +LR L + N + ++ R ++
Sbjct: 143 TKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTS 202
Query: 228 INPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXX 287
+ E F + L T + R+ + +I + L L L++
Sbjct: 203 VPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLNL 262
Query: 288 XXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDR 347
+ I + L+ L + N + + +L L EL + +L
Sbjct: 263 TSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRLHDLLRLQELYLVGGRLSV 322
Query: 348 LEVASFDPIENSLRDLKISGN 368
+E SF + N L+ L +S N
Sbjct: 323 IEPYSFRGL-NYLKVLNVSSN 342
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 68/288 (23%), Positives = 115/288 (39%)
Query: 166 NLQE--LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
N+QE + K+ S+P + S+ R+L L+ NRI + P N
Sbjct: 46 NVQERSVLCHRKKLMSVPEGI---PSETRLLDLSKNRIKTINPDEFSAFPQLEELELNEN 102
Query: 224 DIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXX 283
I I P F ++ L+T RS L+ I +++ L++L LD+ N+
Sbjct: 103 TISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQD 162
Query: 284 XXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
N I ++F L+ L L++ L V T AFT+L +L+ L +
Sbjct: 163 LYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNL 222
Query: 344 KLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLF 403
++ + SF + L+ L+I+ N I + N T IP
Sbjct: 223 NINSIRDYSFKRLYR-LKVLEIA-NWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYLAL 280
Query: 404 KMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSY 451
+ +L+FLN+S N +Q I ++L L L + + S+
Sbjct: 281 RHLVYLRFLNMSYNPIQMIEGNRLHDLLRLQELYLVGGRLSVIEPYSF 328
Score = 121 (47.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 69/305 (22%), Positives = 112/305 (36%)
Query: 139 GVPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLA 197
G+PS R L+L+ N I ++ F L+EL L+ N I +I F +L L+ L L
Sbjct: 65 GIPSETRLLDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLR 124
Query: 198 HNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMY 257
N++ + N IV + +F+D+ L++ + L I+ +
Sbjct: 125 SNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF 184
Query: 258 SILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLK 317
L+ L L L + I + SF ++L+VL +
Sbjct: 185 HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIA 244
Query: 318 R-NRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXX 376
L +TT L NL L I+ L + + + LR L +S N IQ
Sbjct: 245 NWPYLDTMTTNCLYGL-NLTSLTITNANLTSIPYLALRHLVY-LRFLNMSYNPIQMIEGN 302
Query: 377 XXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHL 436
+ P +N +L+ LN+S N L + ++ S L L
Sbjct: 303 RLHDLLRLQELYLVGGRLSVIEPYSFRGLN-YLKVLNVSSNFLTTLEESVFHSVGNLETL 361
Query: 437 DLSRN 441
L N
Sbjct: 362 ALHDN 366
Score = 47 (21.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 9 SKLKSLDLSYNDIVEINPEIF 29
S+ + LDLS N I INP+ F
Sbjct: 68 SETRLLDLSKNRIKTINPDEF 88
>UNIPROTKB|F1PEB2 [details] [associations]
symbol:TLR8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0045416 "positive regulation of interleukin-8
biosynthetic process" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=IEA] [GO:0007249
"I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0050707 "regulation of cytokine secretion"
evidence=IEA] [GO:0034158 "toll-like receptor 8 signaling pathway"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027175 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
GO:GO:0016021 GO:GO:0003677 GO:GO:0003727 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0051607
GO:GO:0005622 GO:GO:0003725 GO:GO:0071260 GO:GO:0045089
InterPro:IPR025875 Pfam:PF12799 GO:GO:0045416 GO:GO:0007249
GO:GO:0045078 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0045356 CTD:51311 KO:K10170
PANTHER:PTHR24365:SF2 OMA:ELHGNPF EMBL:AAEX03026144
RefSeq:XP_003435496.1 Ensembl:ENSCAFT00000036159 GeneID:100684828
KEGG:cfa:100684828 Uniprot:F1PEB2
Length = 1038
Score = 113 (44.8 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 99 PSEENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVP-SLRYLNLTHNNITSLL 157
P +N ++T G F Q+L +L + ++ + I P G+P SL+ L+L NNI +
Sbjct: 104 PDNKNGMNITDGA-FLNLQNLNQLLLEDNQLYQI---PA-GLPGSLKELSLIQNNIIWVT 158
Query: 158 DYNFKGMMNLQELYLDFN---------KIESIPSSVFMHLSDLRVLSLAHNRISKLAPR 207
N G+ NL+ LYL +N K +I F L++L VLSL+ N++ + P+
Sbjct: 159 KKNTSGLTNLERLYLSWNCYFGNNCNNKTFNIEDGTFESLTNLEVLSLSFNKLVHVPPK 217
Score = 100 (40.3 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 131 AIGFHP--FWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK-IESIPSSVFM- 186
+I HP F + LRYLNL+ ++ + F M NL+ L+L+FN ++ I S F+
Sbjct: 273 SIQIHPLAFQTLTELRYLNLSSTSLRKIPATWFDNMRNLKVLHLEFNYLVDEIASGEFLT 332
Query: 187 HLSDLRVLSLAHNRISKLAPR 207
L L +L L++N + P+
Sbjct: 333 KLPVLEILDLSYNYVKAKYPK 353
Score = 98 (39.6 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 40/149 (26%), Positives = 56/149 (37%)
Query: 329 FTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXX 388
FT L NL LD+S N L R+ +F + SL L I NN
Sbjct: 632 FTRLRNLTRLDLSLNNLRRIPNEAFLNLPQSLTQLYIK-NNALNFFNWTLLQEFPRLQVL 690
Query: 389 XIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFKGFDE 448
++ + I L K LQ L L N + + L HLDLS N K +
Sbjct: 691 DLSGNRLSSITNSLSKFTSSLQTLLLHRNRISHLPASFLSEASSLIHLDLSSNLLKMIN- 749
Query: 449 KSYIMSEPKN---IHKAAKNSFALQSSMG 474
KS + ++ I + +N F +G
Sbjct: 750 KSTLQTKTNTSLAILELGRNPFDCTCDIG 778
Score = 84 (34.6 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 27/112 (24%), Positives = 51/112 (45%)
Query: 77 GDMANPIPIGQ-MDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNSFIPAI--G 133
G+ +P+ + +DL +K + P ++ I F + L+ LH+ + G
Sbjct: 328 GEFLTKLPVLEILDLSYNYVKA----KYPKYINISHNFSSLKLLQALHLRGYVFQELRAG 383
Query: 134 -FHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSV 184
F P G+ +L+ +NL N I + F+ NL +YL N+I + + +
Sbjct: 384 DFEPLMGLSNLKTINLGVNFIKQINFTLFQNFPNLSIIYLSENRISPLVNDI 435
Score = 84 (34.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 54/219 (24%), Positives = 98/219 (44%)
Query: 5 LIFMSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECAL 64
L+ +S LK+++L N I +IN +F++ + +++ YL + S + + + +
Sbjct: 388 LMGLSNLKTINLGVNFIKQINFTLFQNFPNLSII-------YLSENRISPLVNDIRQNEV 440
Query: 65 DDRG--RYEIVCRRGDMANPIPIGQMDLGTEVLKIVPS---EENPNHLTIGPIF----QQ 115
+ R+ + R DM P T L I P L++ IF +Q
Sbjct: 441 NGSSSQRHVLKPRSADMEFD-PHSNFYHNTHPL-IKPQCTVYGKALDLSLNSIFFIGREQ 498
Query: 116 FQHLEELHITNSFIPAIG--FH--PFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
F+ ++ N G H F VP ++YL+LT+N + D + L+ L
Sbjct: 499 FEAFHDIACLNLSSNGNGQVLHGNEFSAVPHIKYLDLTNNRLDFDDDNALSDLPELEVLD 558
Query: 172 LDFN----KIESIPSSV-FM-HLSDLRVLSLAHNRISKL 204
L +N +I + + F+ +L+ L+VL+L+HN I L
Sbjct: 559 LSYNAHYFRIAGVTHRLGFIQNLTQLKVLNLSHNSIYTL 597
Score = 75 (31.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 95 LKIVPSEEN--PNHLTIGPIFQQFQHLEELHITNSFIPA-----IGF-HPFWGVPSLRYL 146
LK++ E N + + G + LE L ++ +++ A I H F + L+ L
Sbjct: 311 LKVLHLEFNYLVDEIASGEFLTKLPVLEILDLSYNYVKAKYPKYINISHNFSSLKLLQAL 370
Query: 147 NLTHNNITSLLDYNFK---GMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISK 203
+L L +F+ G+ NL+ + L N I+ I ++F + +L ++ L+ NRIS
Sbjct: 371 HLRGYVFQELRAGDFEPLMGLSNLKTINLGVNFIKQINFTLFQNFPNLSIIYLSENRISP 430
Query: 204 L 204
L
Sbjct: 431 L 431
Score = 74 (31.1 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN I LQ L L RNR++ + + + ++LI LD+S N L + ++
Sbjct: 694 GNRLSSITNSLSKFTSSLQTLLLHRNRISHLPASFLSEASSLIHLDLSSNLLKMINKSTL 753
Query: 354 DPIEN-SLRDLKISGN 368
N SL L++ N
Sbjct: 754 QTKTNTSLAILELGRN 769
Score = 73 (30.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHN-------------NITSLLDYNFKG 163
+++ L +++++I I F G+ +L +NL HN N ++ D F
Sbjct: 60 KYVTVLDLSDNYITHITNESFHGLQNLTKINLNHNANPQHLSENPDNKNGMNITDGAFLN 119
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRI 201
+ NL +L L+ N++ IP+ + L+ LSL N I
Sbjct: 120 LQNLNQLLLEDNQLYQIPAGL---PGSLKELSLIQNNI 154
Score = 69 (29.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 34/148 (22%), Positives = 64/148 (43%)
Query: 304 SFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKL-DRLEVASFDPIENSLRD 362
+F + +L+ L L L K+ T F N+ NL L + +N L D + F L
Sbjct: 280 AFQTLTELRYLNLSSTSLRKIPATWFDNMRNLKVLHLEFNYLVDEIASGEFLTKLPVLEI 339
Query: 363 LKISGNNIQXXXXXXXXXXXXXXXXXXIADMN-----YTDIPKGLFK--MN-PHLQFLNL 414
L +S N ++ + ++ + ++ G F+ M +L+ +NL
Sbjct: 340 LDLSYNYVKAKYPKYINISHNFSSLKLLQALHLRGYVFQELRAGDFEPLMGLSNLKTINL 399
Query: 415 SGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
N ++ I+ L+Q+ L+ + LS N+
Sbjct: 400 GVNFIKQINFTLFQNFPNLSIIYLSENR 427
Score = 69 (29.3 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 31/125 (24%), Positives = 51/125 (40%)
Query: 147 NLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N +N ++ D F+ + NL+ L L FNK+ +P + S L+ L L++ +I ++
Sbjct: 181 NNCNNKTFNIEDGTFESLTNLEVLSLSFNKLVHVPPKL---PSSLKELYLSNAKIKIISQ 237
Query: 207 RXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSC--GLE-NINPMMYSILADL 263
N P F F C C G I+P+ + L +L
Sbjct: 238 EDFKGLRNLRVLDLSGNC-----PRCFN-----APFPCTPCEGGASIQIHPLAFQTLTEL 287
Query: 264 IYLDL 268
YL+L
Sbjct: 288 RYLNL 292
Score = 55 (24.4 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 403 FKMNPHLQFLNLSGNNLQ-DIHNLLYQSNI-KLTHLDLSRN 441
F PH+++L+L+ N L D N L S++ +L LDLS N
Sbjct: 524 FSAVPHIKYLDLTNNRLDFDDDNAL--SDLPELEVLDLSYN 562
Score = 54 (24.1 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 412 LNLSGN-NLQDIHNLLYQSNIKLTHLDLSRNKFKGFDEKSYIMSEPK 457
LNLS N N Q +H + + + +LDL+ N+ FD+ + + P+
Sbjct: 508 LNLSSNGNGQVLHGNEFSAVPHIKYLDLTNNRLD-FDDDNALSDLPE 553
Score = 51 (23.0 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 311 LQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNI 370
L+ + L N + ++ T F N NL + +S N++ P+ N +R +++G++
Sbjct: 394 LKTINLGVNFIKQINFTLFQNFPNLSIIYLSENRIS--------PLVNDIRQNEVNGSSS 445
Query: 371 Q 371
Q
Sbjct: 446 Q 446
Score = 44 (20.5 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 14 LDLSYNDIVEINPEIFKDIQDTTML 38
LDLS N I I E F +Q+ T +
Sbjct: 65 LDLSDNYITHITNESFHGLQNLTKI 89
Score = 44 (20.5 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 7/27 (25%), Positives = 18/27 (66%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQD 34
++ L+ L LS+N +V + P++ +++
Sbjct: 198 LTNLEVLSLSFNKLVHVPPKLPSSLKE 224
>WB|WBGene00004929 [details] [associations]
symbol:soc-2 species:6239 "Caenorhabditis elegans"
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=IGI]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0031344
"regulation of cell projection organization" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068919 GO:GO:0008543 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0007517 InterPro:IPR025875 Pfam:PF12799
GO:GO:0040025 GO:GO:0046579 GO:GO:0031344 HSSP:P07359
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:AF054827 EMBL:FO080091 PIR:B88684
PIR:T30947 PIR:T42998 RefSeq:NP_001021259.1 RefSeq:NP_741391.2
UniGene:Cel.18171 ProteinModelPortal:Q22875 SMR:Q22875
IntAct:Q22875 MINT:MINT-115544 STRING:Q22875 PaxDb:Q22875
PRIDE:Q22875 EnsemblMetazoa:AC7.2a.1 EnsemblMetazoa:AC7.2a.2
GeneID:177286 KEGG:cel:CELE_AC7.2 UCSC:AC7.2b CTD:177286
WormBase:AC7.2a WormBase:AC7.2b InParanoid:Q22875 NextBio:896124
Uniprot:Q22875
Length = 559
Score = 159 (61.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 68/341 (19%), Positives = 136/341 (39%)
Query: 105 NHLTIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
N LT P Q +L++L ++ + + ++ + SL L+L HN +T + +K
Sbjct: 106 NKLTCLPTEIGQLVNLKKLGLSENALTSLP-DSLASLESLETLDLRHNKLTEVPSVIYK- 163
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
+ +L+ L+L +N+I ++ + +LS L++L + N+I +L P YN
Sbjct: 164 IGSLETLWLRYNRIVAVDEQIG-NLSKLKMLDVRENKIREL-PSAIGKLTSLVVCLVSYN 221
Query: 224 DIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXX 283
+ + PE D L + L + P L +L+ + + YN+
Sbjct: 222 HLTRV-PEEIGDCHSLTQLDLQHNDLSEL-PYSIGKLVNLVRIGIRYNKIRCIPSELESC 279
Query: 284 XXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
NH ++ + K+ + L RN L + + +++ +N
Sbjct: 280 QQLEEFIVES-NHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHN 338
Query: 344 KLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLF 403
++ ++ + F L L + N + + +P+ +
Sbjct: 339 QISKIPIGIFSKATR-LTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKV--LPEDIE 395
Query: 404 KMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
K+ +L+ L LS N L+ + N + N KL LDL N+ +
Sbjct: 396 KL-VNLEILVLSNNQLKKLPNQIGNLN-KLRELDLEENELE 434
>UNIPROTKB|Q22875 [details] [associations]
symbol:soc-2 "Leucine-rich repeat protein soc-2"
species:6239 "Caenorhabditis elegans" [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IMP]
[GO:0040025 "vulval development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 EMBL:AF068919
GO:GO:0008543 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007517 InterPro:IPR025875 Pfam:PF12799 GO:GO:0040025
GO:GO:0046579 GO:GO:0031344 HSSP:P07359 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 OMA:LPHGIGN PANTHER:PTHR23155:SF38
EMBL:AF054827 EMBL:FO080091 PIR:B88684 PIR:T30947 PIR:T42998
RefSeq:NP_001021259.1 RefSeq:NP_741391.2 UniGene:Cel.18171
ProteinModelPortal:Q22875 SMR:Q22875 IntAct:Q22875 MINT:MINT-115544
STRING:Q22875 PaxDb:Q22875 PRIDE:Q22875 EnsemblMetazoa:AC7.2a.1
EnsemblMetazoa:AC7.2a.2 GeneID:177286 KEGG:cel:CELE_AC7.2
UCSC:AC7.2b CTD:177286 WormBase:AC7.2a WormBase:AC7.2b
InParanoid:Q22875 NextBio:896124 Uniprot:Q22875
Length = 559
Score = 159 (61.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 68/341 (19%), Positives = 136/341 (39%)
Query: 105 NHLTIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKG 163
N LT P Q +L++L ++ + + ++ + SL L+L HN +T + +K
Sbjct: 106 NKLTCLPTEIGQLVNLKKLGLSENALTSLP-DSLASLESLETLDLRHNKLTEVPSVIYK- 163
Query: 164 MMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN 223
+ +L+ L+L +N+I ++ + +LS L++L + N+I +L P YN
Sbjct: 164 IGSLETLWLRYNRIVAVDEQIG-NLSKLKMLDVRENKIREL-PSAIGKLTSLVVCLVSYN 221
Query: 224 DIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXX 283
+ + PE D L + L + P L +L+ + + YN+
Sbjct: 222 HLTRV-PEEIGDCHSLTQLDLQHNDLSEL-PYSIGKLVNLVRIGIRYNKIRCIPSELESC 279
Query: 284 XXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYN 343
NH ++ + K+ + L RN L + + +++ +N
Sbjct: 280 QQLEEFIVES-NHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHN 338
Query: 344 KLDRLEVASFDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLF 403
++ ++ + F L L + N + + +P+ +
Sbjct: 339 QISKIPIGIFSKATR-LTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKV--LPEDIE 395
Query: 404 KMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNKFK 444
K+ +L+ L LS N L+ + N + N KL LDL N+ +
Sbjct: 396 KL-VNLEILVLSNNQLKKLPNQIGNLN-KLRELDLEENELE 434
>RGD|1310827 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310827 GO:GO:0016021 GO:GO:0006954 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 Pfam:PF01463 HSSP:P07359 CTD:9865
HOVERGEN:HBG066060 OMA:EFPCDRF OrthoDB:EOG4KWJSW EMBL:BC100659
IPI:IPI00358213 RefSeq:NP_001029182.1 UniGene:Rn.25045
STRING:Q496Z2 Ensembl:ENSRNOT00000036951 GeneID:362364
KEGG:rno:362364 UCSC:RGD:1310827 InParanoid:Q496Z2 NextBio:679662
Genevestigator:Q496Z2 Uniprot:Q496Z2
Length = 811
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 75/329 (22%), Positives = 127/329 (38%)
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPS--LRYLNLTHNNITSLLDYNFKGMMNLQELYLDF 174
QH + L TN + A+ P L Y +L N IT++ ++F + L+ L L +
Sbjct: 34 QHPQHLLCTNRGLRAVPKTSSLPSPQDVLTY-SLGGNFITNITAFDFHRLGQLRRLDLQY 92
Query: 175 NKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFK 234
N+I S+ F LS L L L +N + LAP N+I ++ F+
Sbjct: 93 NQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEIGRLSRGSFE 152
Query: 235 DIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXG 294
++ L + L + +++ L +L+YL L N+
Sbjct: 153 GLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSA 212
Query: 295 NHFPVILEKS--FSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVAS 352
N L + F L L L N L + F +L L L +S N+L L +
Sbjct: 213 NELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEA 272
Query: 353 FDPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFL 412
F +E +LR+L++ GN + ++ + + F L+ L
Sbjct: 273 FWGLE-ALRELRLEGNRLNQLPLTLLEPLHSLEALD-LSGNELSALHPATFGHQGRLREL 330
Query: 413 NLSGNNLQDIHNLLYQSNIKLTHLDLSRN 441
+L N L + ++ ++ L LDL N
Sbjct: 331 SLRDNALSALSGDIFAASPALYRLDLDGN 359
Score = 153 (58.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 62/258 (24%), Positives = 99/258 (38%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F++ LEEL++ N+ + A+ + LR L N I L +F+G+ +L +L L
Sbjct: 103 FEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRL 162
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEI--NP 230
D N + ++P +VF L +L L L NRI L N++ +
Sbjct: 163 DGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHA 222
Query: 231 EIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXX 290
F ++ L T + L+++ P ++ L L L L NQ
Sbjct: 223 ATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALREL 282
Query: 291 XXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEV 350
GN + L+ L L N L+ + F + L EL + N L L
Sbjct: 283 RLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSG 342
Query: 351 ASFDPIENSLRDLKISGN 368
F +L L + GN
Sbjct: 343 DIF-AASPALYRLDLDGN 359
Score = 143 (55.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 53/201 (26%), Positives = 94/201 (46%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTMLFQVTIFLYLLHSSASVMCPYMCECALDDR 67
+ +L+ LDL YN I ++P+ F+ + + L + LYL ++ + P L
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKL---SRLEE----LYLGNNLLQALAPG----TLAPL 130
Query: 68 GRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQFQHLEELHITNS 127
+ I+ G+ + G + G E L + + N +F +L LH+ +
Sbjct: 131 RKLRILYANGNEIGRLSRGSFE-GLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEAN 189
Query: 128 FIPAIGFHPFWGVPSLRYLNLTHNNITSLLDY--NFKGMMNLQELYLDFNKIESIPSSVF 185
I +G + F + LR+LNL+ N + L + F + +L L L N ++ + VF
Sbjct: 190 RIRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVF 249
Query: 186 MHLSDLRVLSLAHNRISKLAP 206
HL L +LSL+ N+++ LAP
Sbjct: 250 QHLPRLGLLSLSGNQLTHLAP 270
>UNIPROTKB|F1S6B4 [details] [associations]
symbol:PRELP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0007569 "cell aging" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450 GO:GO:0031012
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0007569
GeneTree:ENSGT00600000084286 PANTHER:PTHR24371:SF15 OMA:NKLEHLY
EMBL:CU466494 Ensembl:ENSSSCT00000016640 Uniprot:F1S6B4
Length = 375
Score = 124 (48.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L++ N+FI + F LR++NL +N I + + + +L LY++ N++E +P
Sbjct: 106 LYLQNNFITELPVESFKNATGLRWINLDNNRIRKVDQRVLEKLPSLVFLYMEKNQLEEVP 165
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE--INPEIFKDIQEL 239
S++ +L LR L+ N+IS++ P +N + + P+ F+ ++ L
Sbjct: 166 SALPRNLEQLR---LSQNQISRIPPGVFSKLENLLLLDLQHNKLSDGVFKPDTFQGLKNL 222
Query: 240 KTFKCRSCGLENINPMMYSILADLIYLD 267
L + P + + + L YLD
Sbjct: 223 MQLNLAHNILRKMPPKVPTAIHQL-YLD 249
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 56/237 (23%), Positives = 95/237 (40%)
Query: 140 VPS-LRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAH 198
+PS + YL L +N IT L +FK L+ + LD N+I + V L L L +
Sbjct: 99 IPSRIHYLYLQNNFITELPVESFKNATGLRWINLDNNRIRKVDQRVLEKLPSLVFLYMEK 158
Query: 199 NRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLEN--INPMM 256
N++ ++ P N I I P +F ++ L + L + P
Sbjct: 159 NQLEEV-P--SALPRNLEQLRLSQNQISRIPPGVFSKLENLLLLDLQHNKLSDGVFKPDT 215
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
+ L +L+ L+L +N N I F L + L
Sbjct: 216 FQGLKNLMQLNLAHN---ILRKMPPKVPTAIHQLYLDSNKIETIPNGYFKGFPNLAFIRL 272
Query: 317 KRNRLAK--VTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
N+L+ + +F N++NL+ L +S+NK+ + I N L L ++ N+I+
Sbjct: 273 NYNKLSDRGLPKNSF-NISNLLVLHLSHNKISNVPA-----INNKLEHLYLNNNSIE 323
Score = 75 (31.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 33/113 (29%), Positives = 49/113 (43%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL-DR-LEVASFDPIENSLRDLKISGNNIQ 371
L L N++ + F NL + ++YNKL DR L SF+ I N L L +S N I
Sbjct: 246 LYLDSNKIETIPNGYFKGFPNLAFIRLNYNKLSDRGLPKNSFN-ISNLLV-LHLSHNKIS 303
Query: 372 XXXXXXXXXXXXXXXXXXIA-DMNYTDIPKGL---FKMNPHLQFLNLSGNNLQ 420
I M+ ++ P + + PHL++L L GN L+
Sbjct: 304 NVPAINNKLEHLYLNNNSIEIKMSISEFPTTIVDDLENVPHLRYLRLDGNYLK 356
>UNIPROTKB|Q9H156 [details] [associations]
symbol:SLITRK2 "SLIT and NTRK-like protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:Y19205 EMBL:AY358828 EMBL:AK091015
EMBL:AK289732 EMBL:AL109653 EMBL:BC113011 EMBL:BC113012
EMBL:AB058757 IPI:IPI00176104 IPI:IPI00410358 RefSeq:NP_001137475.1
RefSeq:NP_001137476.1 RefSeq:NP_001137477.1 RefSeq:NP_001137478.1
RefSeq:NP_001137480.1 RefSeq:NP_001137481.1 RefSeq:NP_001137482.1
RefSeq:NP_115928.1 UniGene:Hs.320368 ProteinModelPortal:Q9H156
SMR:Q9H156 STRING:Q9H156 PhosphoSite:Q9H156 DMDM:46397026
PaxDb:Q9H156 PRIDE:Q9H156 Ensembl:ENST00000370490
Ensembl:ENST00000413937 Ensembl:ENST00000428560
Ensembl:ENST00000434188 Ensembl:ENST00000447897 GeneID:84631
KEGG:hsa:84631 UCSC:uc004fcd.3 CTD:84631 GeneCards:GC0XP144900
H-InvDB:HIX0017096 H-InvDB:HIX0176721 HGNC:HGNC:13449 HPA:HPA051847
MIM:300561 neXtProt:NX_Q9H156 PharmGKB:PA134968225 eggNOG:NOG147171
InParanoid:Q9H156 OMA:LQADYNY PhylomeDB:Q9H156 ChiTaRS:SLITRK2
GenomeRNAi:84631 NextBio:74551 ArrayExpress:Q9H156 Bgee:Q9H156
CleanEx:HS_SLITRK2 Genevestigator:Q9H156 GermOnline:ENSG00000185985
Uniprot:Q9H156
Length = 845
Score = 123 (48.4 bits), Expect = 0.00038, P = 0.00038
Identities = 46/166 (27%), Positives = 72/166 (43%)
Query: 43 IFLYLLHSSASVMCPYMCECALD--DRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPS 100
I +Y S + CP C C D G + C+ N + + L +
Sbjct: 327 IMVYQTKSPVPLTCPSSCVCTSQSSDNG-LNVNCQERKFTNISDLQPKPTSPKKLYLTG- 384
Query: 101 EENPNHL-TIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLD 158
N+L T+ ++ L+ LH+ N+ I I F + SLR L L N + L
Sbjct: 385 ----NYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYP 440
Query: 159 YNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ +LQ LYL++N I+ I F L +L++L L +N + L
Sbjct: 441 SMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSL 486
Score = 116 (45.9 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 103 NPNHLT-IGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
N N LT + P F + + LH+ N+ + I F G+ +L+ L+L +N + L +
Sbjct: 70 NGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDT 129
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ +L+ L D+N I +I + F L+ L+VL L N + L
Sbjct: 130 FLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSL 173
Score = 104 (41.7 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 30/94 (31%), Positives = 50/94 (53%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F + L+ LH+ N+ + + F G+ SL YL +N I+++ F + L+ L L
Sbjct: 106 FSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLIL 165
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
+ N + S+PS+VF + L L L NR+ K+ P
Sbjct: 166 NDNLLLSLPSNVFRFVL-LTHLDLRGNRL-KVMP 197
Score = 93 (37.8 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN+ + + L +L L NR+A + AFTNLT+L L ++ N L+ L + F
Sbjct: 384 GNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMF 443
Query: 354 DPIENSLRDLKISGNNIQ 371
D ++ SL+ L + N I+
Sbjct: 444 DGLQ-SLQYLYLEYNVIK 460
Score = 86 (35.3 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 102 ENPNHLTIGPIFQQFQH-LEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
EN T+ + Q Q+ + +L + + + + + F + L+L +N + +
Sbjct: 47 ENKGFTTVS-LLQPPQYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGA 105
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
F G+ L+ L+L+ NK+E + F+ L L L +N IS +
Sbjct: 106 FSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYISAI 149
Score = 75 (31.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 31/127 (24%), Positives = 49/127 (38%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L L N +T L F N L+L N ++ I + F L L+ L L +N++ L
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILR 126
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
YN I I F + +LK L ++ ++ + L +
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTH 185
Query: 266 LDLGYNQ 272
LDL N+
Sbjct: 186 LDLRGNR 192
Score = 70 (29.7 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N VI E +F++ L+ L L N L + + F L +L L + YN + ++ +FD
Sbjct: 409 NRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFD 468
Query: 355 PIENSLRDLKISGN 368
+ N L+ L ++ N
Sbjct: 469 ALIN-LQLLFLNNN 481
Score = 62 (26.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 25/92 (27%), Positives = 36/92 (39%)
Query: 257 YSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCL 316
YS L DL++L G N+ GN+ V+ F LQ L L
Sbjct: 398 YSSL-DLLHL--GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYL 454
Query: 317 KRNRLAKVTTTAFTNLTNLIELDISYNKLDRL 348
+ N + ++ F L NL L ++ N L L
Sbjct: 455 EYNVIKEIKPLTFDALINLQLLFLNNNLLRSL 486
Score = 60 (26.2 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 32/129 (24%), Positives = 53/129 (41%)
Query: 329 FTNLTNLIELDISYNKL----DRLE-VASFDPIENSLRDLKISGNNIQXXXXXXXXXXXX 383
FTN+++L S KL + L+ V D +E S DL GNN +
Sbjct: 364 FTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNN-RIAVIQEGAFTNL 422
Query: 384 XXXXXXIADMNYTDIP-KGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTHLDLSRNK 442
+ NY ++ +F LQ+L L N +++I L + + I L L L+ N
Sbjct: 423 TSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNL 482
Query: 443 FKGFDEKSY 451
+ + +
Sbjct: 483 LRSLPDNIF 491
>UNIPROTKB|E1C125 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:AADN02013465 IPI:IPI00592627 RefSeq:XP_420266.3
Ensembl:ENSGALT00000011717 GeneID:422287 KEGG:gga:422287
Uniprot:E1C125
Length = 837
Score = 132 (51.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 44/153 (28%), Positives = 74/153 (48%)
Query: 56 CPYMCECAL--DDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLT-IGPI 112
CP C C D G + C+ ++ + + L + L + N N++ +
Sbjct: 342 CPVPCVCKTHPSDLG-LSVNCQERNIESMAELLPKPLNAKKLHV-----NGNYIKDVDTA 395
Query: 113 -FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELY 171
F +F+ L+ LH+ ++ I AI F + +LR L L N I L F G+ NLQ LY
Sbjct: 396 DFTEFEGLDLLHLGSNRISAIRGEVFRNLTNLRRLYLNGNQIERLSPEMFAGLHNLQYLY 455
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L++N I+ I + F + +L++L L +N + L
Sbjct: 456 LEYNVIKEILAGTFDLMPNLQLLYLNNNLLRSL 488
Score = 121 (47.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYL 172
F F H L + N+ + I F G+ +L+ L+L +N + L F G+ NL+ L
Sbjct: 79 FLNFTHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQA 138
Query: 173 DFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
D+N I+SI F L L+VL L N IS L
Sbjct: 139 DYNLIKSIERGAFNKLHKLKVLILNDNLISFL 170
Score = 110 (43.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 30/95 (31%), Positives = 47/95 (49%)
Query: 110 GPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQE 169
G F L++LH+ N+ + + F G+ +L YL +N I S+ F + L+
Sbjct: 100 GGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKSIERGAFNKLHKLKV 159
Query: 170 LYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
L L+ N I +P ++F S L L + NRI KL
Sbjct: 160 LILNDNLISFLPDNIFRFAS-LTHLDIRGNRIQKL 193
Score = 87 (35.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 39/150 (26%), Positives = 63/150 (42%)
Query: 294 GNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
GN+ + F+ L +L L NR++ + F NLTNL L ++ N+++RL F
Sbjct: 386 GNYIKDVDTADFTEFEGLDLLHLGSNRISAIRGEVFRNLTNLRRLYLNGNQIERLSPEMF 445
Query: 354 DPIENSLRDLKISGNNIQXXXXXXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLN 413
+ N L+ L + N I+ ++ +P +F P L LN
Sbjct: 446 AGLHN-LQYLYLEYNVIKEILAGTFDLMPNLQLLYLNNNL-LRSLPAYIFAGAP-LARLN 502
Query: 414 LSGNNLQ--DIHNLLYQSNIKLTHLDLSRN 441
L N+ + +L Q LT +DL N
Sbjct: 503 LRNNHFMYLPVSGVLDQLK-SLTQIDLEGN 531
Score = 86 (35.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 34/137 (24%), Positives = 52/137 (37%)
Query: 136 PFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLS 195
P W + +LN +N + L F + L L NK+++I F+ LS L+ L
Sbjct: 56 PPWS--NFYHLNFQNNLLIILYPNTFLNFTHAVSLQLGNNKLQNIEGGAFLGLSALKQLH 113
Query: 196 LAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPM 255
L +N + L YN I I F + +LK L + P
Sbjct: 114 LNNNELKILRADTFLGIENLEYLQADYNLIKSIERGAFNKLHKLKVLILND-NLISFLPD 172
Query: 256 MYSILADLIYLDLGYNQ 272
A L +LD+ N+
Sbjct: 173 NIFRFASLTHLDIRGNR 189
Score = 50 (22.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/105 (20%), Positives = 39/105 (37%)
Query: 249 LENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQ 308
+++++ ++ L L LG N+ GN + + F+
Sbjct: 389 IKDVDTADFTEFEGLDLLHLGSNRISAIRGEVFRNLTNLRRLYLNGNQIERLSPEMFAGL 448
Query: 309 FKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASF 353
LQ L L+ N + ++ F + NL L ++ N L L F
Sbjct: 449 HNLQYLYLEYNVIKEILAGTFDLMPNLQLLYLNNNLLRSLPAYIF 493
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 294 GNHFPVILEKSFSSQFKLQ 312
GNH +++E+ S F+L+
Sbjct: 797 GNHSKIVVEQRKSEYFELK 815
>UNIPROTKB|Q9BZR6 [details] [associations]
symbol:RTN4R "Reticulon-4 receptor" species:9606 "Homo
sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004872 "receptor activity"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0007409 EMBL:CH471176
InterPro:IPR000372 SMART:SM00013 GO:GO:0050771 HOGENOM:HOG000116109
HOVERGEN:HBG063707 EMBL:AF283463 EMBL:AL834449 EMBL:AY358297
EMBL:CR456360 EMBL:AC058790 EMBL:AC007663 EMBL:BC011787
IPI:IPI00289204 RefSeq:NP_075380.1 UniGene:Hs.30868 PDB:1OZN
PDB:1P8T PDBsum:1OZN PDBsum:1P8T ProteinModelPortal:Q9BZR6
SMR:Q9BZR6 IntAct:Q9BZR6 STRING:Q9BZR6 DMDM:25453267 PRIDE:Q9BZR6
DNASU:65078 Ensembl:ENST00000043402 GeneID:65078 KEGG:hsa:65078
UCSC:uc002zru.3 CTD:65078 GeneCards:GC22M020234 HGNC:HGNC:18601
HPA:CAB012443 MIM:605566 neXtProt:NX_Q9BZR6 PharmGKB:PA38600
InParanoid:Q9BZR6 KO:K16659 PhylomeDB:Q9BZR6
EvolutionaryTrace:Q9BZR6 GenomeRNAi:65078 NextBio:67268 Bgee:Q9BZR6
CleanEx:HS_RTN4R Genevestigator:Q9BZR6 GermOnline:ENSG00000040608
Uniprot:Q9BZR6
Length = 473
Score = 156 (60.0 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 49/202 (24%), Positives = 84/202 (41%)
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYN-DIV 226
Q ++L N+I +P++ F +L +L L N ++++ N +
Sbjct: 60 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 119
Query: 227 EINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXX 286
++P F + L T CGL+ + P ++ LA L YL L N
Sbjct: 120 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGN 179
Query: 287 XXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLD 346
GN + E++F L L L +NR+A V AF +L L+ L + N L
Sbjct: 180 LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 239
Query: 347 RLEVASFDPIENSLRDLKISGN 368
L + P+ +L+ L+++ N
Sbjct: 240 ALPTEALAPLR-ALQYLRLNDN 260
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/154 (27%), Positives = 68/154 (44%)
Query: 119 LEELHIT-NSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKI 177
LE+L ++ N+ + ++ F G+ L L+L + L F+G+ LQ LYL N +
Sbjct: 107 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 166
Query: 178 ESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQ 237
+++P F L +L L L NRIS + R N + ++P F+D+
Sbjct: 167 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 226
Query: 238 ELKTFKCRSCGLENINPMMYSILADLIYLDLGYN 271
L T + L + + L L YL L N
Sbjct: 227 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 260
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 91 GTEVLKIVPSEENPNHLTIGPI-FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLT 149
G +L+ + +N ++ P F L LH+ + +G F G+ +L+YL L
Sbjct: 103 GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 162
Query: 150 HNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
N + +L D F+ + NL L+L N+I S+P F L L L L NR++ + P
Sbjct: 163 DNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 219
>UNIPROTKB|P51888 [details] [associations]
symbol:PRELP "Prolargin" species:9606 "Homo sapiens"
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0007569 "cell aging" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0018146 "keratan
sulfate biosynthetic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0042339
"keratan sulfate metabolic process" evidence=TAS] [GO:0042340
"keratan sulfate catabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=ISS;IDA] Pfam:PF00560 Reactome:REACT_111217
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450
Reactome:REACT_116125 GO:GO:0005975 GO:GO:0005578 eggNOG:COG4886
GO:GO:0008201 EMBL:CH471067 GO:GO:0001501 GO:GO:0043202
GO:GO:0005796 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0018146 GO:GO:0007569 GO:GO:0042340 GO:GO:0005201
HOGENOM:HOG000234447 HOVERGEN:HBG108061 EMBL:AL391817 CTD:5549
KO:K08125 OrthoDB:EOG44F69H PANTHER:PTHR24371:SF15 EMBL:U29089
EMBL:U41344 EMBL:U41343 EMBL:CR542270 EMBL:BC032498 IPI:IPI00020987
PIR:I39068 RefSeq:NP_002716.1 RefSeq:NP_958505.1 UniGene:Hs.632481
ProteinModelPortal:P51888 SMR:P51888 IntAct:P51888 STRING:P51888
PhosphoSite:P51888 DMDM:1709586 PaxDb:P51888 PeptideAtlas:P51888
PRIDE:P51888 DNASU:5549 Ensembl:ENST00000343110 GeneID:5549
KEGG:hsa:5549 UCSC:uc001gzs.3 GeneCards:GC01P203444 HGNC:HGNC:9357
MIM:601914 neXtProt:NX_P51888 PharmGKB:PA33729 InParanoid:P51888
OMA:NKLEHLY ChiTaRS:PRELP GenomeRNAi:5549 NextBio:21502
PMAP-CutDB:P51888 ArrayExpress:P51888 Bgee:P51888 CleanEx:HS_PRELP
Genevestigator:P51888 GermOnline:ENSG00000188783 Uniprot:P51888
Length = 382
Score = 121 (47.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 122 LHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIP 181
L++ N+FI + F LR++NL +N I + + + L LY++ N++E +P
Sbjct: 107 LYLQNNFITELPVESFQNATGLRWINLDNNRIRKIDQRVLEKLPGLVFLYMEKNQLEEVP 166
Query: 182 SSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVE--INPEIFKDIQEL 239
S++ +L LR L+ N IS++ P +N + + P+ F ++ L
Sbjct: 167 SALPRNLEQLR---LSQNHISRIPPGVFSKLENLLLLDLQHNRLSDGVFKPDTFHGLKNL 223
Query: 240 KTFKCRSCGLENINPMMYSILADLIYLD 267
L + P + + + L YLD
Sbjct: 224 MQLNLAHNILRKMPPRVPTAIHQL-YLD 250
Score = 116 (45.9 bits), Expect = 0.00072, P = 0.00072
Identities = 56/235 (23%), Positives = 94/235 (40%)
Query: 141 PSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNR 200
P + YL L +N IT L +F+ L+ + LD N+I I V L L L + N+
Sbjct: 102 PRIHYLYLQNNFITELPVESFQNATGLRWINLDNNRIRKIDQRVLEKLPGLVFLYMEKNQ 161
Query: 201 ISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLEN--INPMMYS 258
+ ++ P N I I P +F ++ L + L + P +
Sbjct: 162 LEEV-P--SALPRNLEQLRLSQNHISRIPPGVFSKLENLLLLDLQHNRLSDGVFKPDTFH 218
Query: 259 ILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKR 318
L +L+ L+L +N N I F S L + L
Sbjct: 219 GLKNLMQLNLAHN---ILRKMPPRVPTAIHQLYLDSNKIETIPNGYFKSFPNLAFIRLNY 275
Query: 319 NRLAK--VTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQ 371
N+L + +F N++NL+ L +S+N+ ++S I N L L ++ N+I+
Sbjct: 276 NKLTDRGLPKNSF-NISNLLVLHLSHNR-----ISSVPAINNRLEHLYLNNNSIE 324
Score = 77 (32.2 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 36/119 (30%), Positives = 50/119 (42%)
Query: 314 LCLKRNRLAKVTTTAFTNLTNLIELDISYNKL-DR-LEVASFDPIENSLRDLKISGNNIQ 371
L L N++ + F + NL + ++YNKL DR L SF+ I N L L +S N I
Sbjct: 247 LYLDSNKIETIPNGYFKSFPNLAFIRLNYNKLTDRGLPKNSFN-ISNLLV-LHLSHNRIS 304
Query: 372 XXXXXXXXXXXXXXXXXXIADMNYTDI-PKGLFKMN---------PHLQFLNLSGNNLQ 420
I +N T I P L + PHL++L L GN L+
Sbjct: 305 SVPAINNRLEHLYLNNNSIEKINGTQICPNDLVAFHDFSSDLENVPHLRYLRLDGNYLK 363
>ZFIN|ZDB-GENE-080219-38 [details] [associations]
symbol:zgc:172282 "zgc:172282" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-080219-38 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG052352 EMBL:BC171440 IPI:IPI00882605 UniGene:Dr.85826
ProteinModelPortal:B7ZV32 Uniprot:B7ZV32
Length = 687
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 41/153 (26%), Positives = 76/153 (49%)
Query: 121 ELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESI 180
EL +T +FI A+ F + SL +L L+ N I+ ++ Y F + L+ L+LD N++ I
Sbjct: 55 ELRLTENFITAVKRRDFANMTSLLHLTLSRNTISQIMPYTFADLKRLRALHLDSNRLSVI 114
Query: 181 PSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX-XYNDIVEINPEIFKDIQEL 239
F L++LR L LA+N++ ++P YN++V+I + + +
Sbjct: 115 TDDHFRGLTNLRHLILANNQLHNISPHAFDDFLGTLEDLDLSYNNLVDIPWDTIGRLTNV 174
Query: 240 KTFKCRSCGLENINPMMYSILADLIYLDLGYNQ 272
T ++++ ++S L L LD+ N+
Sbjct: 175 NTLNMDHNLIDHVPLGIFSNLHKLARLDMTSNK 207
>UNIPROTKB|Q5XM32 [details] [associations]
symbol:RXFP2 "Relaxin receptor 2" species:9615 "Canis lupus
familiaris" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0008584 "male
gonad development" evidence=IEA] [GO:0007189 "adenylate
cyclase-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 GO:GO:0016021 GO:GO:0005886
GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0008584 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
HOVERGEN:HBG026354 HOGENOM:HOG000049056 EMBL:AY749634
RefSeq:NP_001005870.1 UniGene:Cfa.16241 ProteinModelPortal:Q5XM32
SMR:Q5XM32 STRING:Q5XM32 GeneID:450220 KEGG:cfa:450220 CTD:122042
InParanoid:Q5XM32 KO:K04307 OrthoDB:EOG47M1XF NextBio:20833171
Uniprot:Q5XM32
Length = 737
Score = 158 (60.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 65/279 (23%), Positives = 110/279 (39%)
Query: 57 PYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPNHLTIGPIFQQF 116
P C+C +G E+ C D+ +P+ + T +L + ++N H +F ++
Sbjct: 95 PQPCDC----KGT-ELECINADL-RAVPV--ISSNTTLLSL---KKNKIHSLPDKVFTKY 143
Query: 117 QHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNLQELYLDFNK 176
L+++ + ++ I I F+G+ +L+ L L+HN IT+L FK + L L LD N
Sbjct: 144 TQLKQIFLQHNCITHISRKAFFGLHNLQILYLSHNCITTLRPGVFKDLHQLTWLILDDNP 203
Query: 177 IESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXXXYNDIVEINPEIFKDI 236
I I +F L L LS+ +N + L + N I + F
Sbjct: 204 ITRISQQLFTGLKSLFFLSMVNNYLEALPKQMCAQMPQLNWMDLEGNGIKYLTNSSFLSC 263
Query: 237 QELKTFKCRSCGLENINPMMYSILADLIYLDLGYNQXXXXXXXXXXXXXXXXXXXXXGNH 296
L ++ + +S L +L LDL N N
Sbjct: 264 NSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSNMIMELPPEIFKDLKLLQKLNLSSNP 323
Query: 297 FPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNL 335
+ + F S +LQ L L+R + + T F + NL
Sbjct: 324 LLYLHKNQFESLKQLQSLDLERIEIPNINTRMFQPMMNL 362
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 56/220 (25%), Positives = 91/220 (41%)
Query: 146 LNLTHNNITSLLDYNFKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLA 205
L+L N I SL D F L++++L N I I F L +L++L L+HN I+ L
Sbjct: 125 LSLKKNKIHSLPDKVFTKYTQLKQIFLQHNCITHISRKAFFGLHNLQILYLSHNCITTLR 184
Query: 206 PRXXXXXXXXXXXXXXYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIY 265
P N I I+ ++F ++ L + LE + M + + L +
Sbjct: 185 PGVFKDLHQLTWLILDDNPITRISQQLFTGLKSLFFLSMVNNYLEALPKQMCAQMPQLNW 244
Query: 266 LDLGYNQXXXXXXXXXXXXXXXXXXXXXGNHFPVILEKSFSSQFKLQVLCLKRNRLAKVT 325
+DL N N + EK+FSS L L L N + ++
Sbjct: 245 MDLEGNGIKYLTNSSFLSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSNMIMELP 304
Query: 326 TTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKI 365
F +L L +L++S N L L F+ ++ L+ L +
Sbjct: 305 PEIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQ-LQSLDL 343
Score = 139 (54.0 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 37/166 (22%), Positives = 76/166 (45%)
Query: 101 EENPNHLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYN 160
++NP +F + L L + N+++ A+ +P L +++L N I L + +
Sbjct: 200 DDNPITRISQQLFTGLKSLFFLSMVNNYLEALPKQMCAQMPQLNWMDLEGNGIKYLTNSS 259
Query: 161 FKGMMNLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAPRXXXXXXXXXXXXX 220
F +L L+L N+I+ +P F L +L L L+ N I +L P
Sbjct: 260 FLSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSNMIMELPPEIFKDLKLLQKLNL 319
Query: 221 XYNDIVEINPEIFKDIQELKTFKCRSCGLENINPMMYSILADLIYL 266
N ++ ++ F+ +++L++ + NIN M+ + +L ++
Sbjct: 320 SSNPLLYLHKNQFESLKQLQSLDLERIEIPNINTRMFQPMMNLSHI 365
Score = 57 (25.1 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 8 MSKLKSLDLSYNDIVEINPEIFKDIQDTTML 38
+ L+ L LS+N I + P +FKD+ T L
Sbjct: 167 LHNLQILYLSHNCITTLRPGVFKDLHQLTWL 197
>UNIPROTKB|E1B8X9 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:HHRGPAL EMBL:DAAA02033829 EMBL:DAAA02033830 IPI:IPI00697816
Ensembl:ENSBTAT00000013364 Uniprot:E1B8X9
Length = 901
Score = 113 (44.8 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 47/157 (29%), Positives = 70/157 (44%)
Query: 55 MCPYMCECALDDRGRYEIVCR-RG-----DMANP-IPIGQMDLGTEVLKIVPSEENPNHL 107
+C C C D G + C RG +++ P PI + L +L S PN
Sbjct: 47 ICDNACPCEEKD-GILTVSCENRGIISLSEISPPRFPIYHLLLSGNLL----SRLYPNE- 100
Query: 108 TIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNL 167
F + LH+ ++ I I F G+ LR L+L +N + L D F G+ +L
Sbjct: 101 -----FVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESL 155
Query: 168 QELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKL 204
+ L +D+N I I + F L L+VL L N +S L
Sbjct: 156 EYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSL 192
Score = 109 (43.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 113 FQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMMNL-QELY 171
F + L LH+ N+ + + F G+ SL YL + +N I S+++ N G ++L Q L
Sbjct: 125 FHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYI-SVIEPNAFGKLHLLQVLI 183
Query: 172 LDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L+ N + S+P+++F + L L L NR+ KL P
Sbjct: 184 LNDNLLSSLPNNLFRFVP-LTHLDLRGNRL-KLLP 216
Score = 95 (38.5 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 34/128 (26%), Positives = 57/128 (44%)
Query: 316 LKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFDPIENSLRDLKISGNNIQXXXX 375
L N +A V + F T L L + N++ ++ +F + N LR L ++GN I+
Sbjct: 416 LTENYIALVRRSDFLEATGLDLLHLGNNRISMIQDRAFGDLTN-LRRLYLNGNRIERLSP 474
Query: 376 XXXXXXXXXXXXXXIADMNYTDIPKGLFKMNPHLQFLNLSGNNLQDIHNLLYQSNIKLTH 435
++ +I G F P+LQ L L+ N LQ + + ++ S + L
Sbjct: 475 ELFYGLQSLQYLFLQYNL-IREIQPGTFDPVPNLQLLFLNNNLLQTLPSGVF-SGLTLLR 532
Query: 436 LDLSRNKF 443
L+L N F
Sbjct: 533 LNLRSNHF 540
Score = 91 (37.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 295 NHFPVILEKSFSSQFKLQVLCLKRNRLAKVTTTAFTNLTNLIELDISYNKLDRLEVASFD 354
N +I +++F L+ L L NR+ +++ F L +L L + YN + ++ +FD
Sbjct: 443 NRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQPGTFD 502
Query: 355 PIENSLRDLKISGNNIQ 371
P+ N L+ L ++ N +Q
Sbjct: 503 PVPN-LQLLFLNNNLLQ 518
Score = 84 (34.6 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 38/161 (23%), Positives = 70/161 (43%)
Query: 46 YLLHSSASVMCPYMCECALDDRGRYEIVCRRGDMANPIPIGQMDLGTEVLKIVPSEENPN 105
++L + A + + CA + Y +C D N P + D G +L + S EN
Sbjct: 21 WMLQTLAFALTSLVLSCA-ETIDYYGEIC---D--NACPCEEKD-G--ILTV--SCENRG 69
Query: 106 HLTIGPIFQQFQHLEELHITNSFIPAIGFHPFWGVPSLRYLNLTHNNITSLLDYNFKGMM 165
+++ I + L ++ + + + + F L+L N I + F G+
Sbjct: 70 IISLSEISPPRFPIYHLLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLR 129
Query: 166 NLQELYLDFNKIESIPSSVFMHLSDLRVLSLAHNRISKLAP 206
L+ L+L+ NK+E + F+ L L L + +N IS + P
Sbjct: 130 GLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEP 170
WARNING: HSPs involving 447 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 497 444 0.00090 118 3 11 22 0.36 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 697
No. of states in DFA: 604 (64 KB)
Total size of DFA: 245 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.30u 0.10s 35.40t Elapsed: 00:00:09
Total cpu time: 35.51u 0.10s 35.61t Elapsed: 00:00:11
Start: Thu Aug 15 14:46:50 2013 End: Thu Aug 15 14:47:01 2013
WARNINGS ISSUED: 2