BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10290
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DCP1|FXRD1_XENLA FAD-dependent oxidoreductase domain-containing protein 1 OS=Xenopus
laevis GN=foxred1 PE=2 SV=1
Length = 499
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 91/125 (72%)
Query: 4 KHILASLVSLYARASTTLSVGGLRQQFSLRENIEMSLFGAEFLRNIKHHCHVIGEDEPDV 63
K ++ Y+RAST LS GG+RQQFS ENI+MSLF A+FLRNI H V+ ED D+
Sbjct: 106 KVVVVERDPTYSRASTVLSAGGIRQQFSRPENIQMSLFSAQFLRNINEHLGVVNEDRIDI 165
Query: 64 NFTPNGYLFCASQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGL 123
F P+GYLF AS++GA +E+N+ +Q+E GA+ L+ P+QLK KFPW+NT+ +ALA GL
Sbjct: 166 QFNPSGYLFLASEEGATIMEENYNVQRECGAQVTLMLPDQLKKKFPWINTNGVALASYGL 225
Query: 124 EKEGW 128
E EGW
Sbjct: 226 ENEGW 230
>sp|Q5EA45|FXRD1_BOVIN FAD-dependent oxidoreductase domain-containing protein 1 OS=Bos
taurus GN=FOXRED1 PE=2 SV=1
Length = 486
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 89/115 (77%)
Query: 14 YARASTTLSVGGLRQQFSLRENIEMSLFGAEFLRNIKHHCHVIGEDEPDVNFTPNGYLFC 73
YARAST LSVGG+RQQFSL +N+++SLF AEFLRNI + V+ + D+ F P+GYL
Sbjct: 103 YARASTVLSVGGIRQQFSLPQNVQLSLFSAEFLRNINEYLAVVDDPPLDLQFNPSGYLLL 162
Query: 74 ASQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEKEGW 128
AS++GAA +E+N ++Q++ GAK L+ PEQL+ KFPW+NT+ +ALA GLE EGW
Sbjct: 163 ASEEGAAIMERNVKMQRQEGAKVCLMSPEQLQKKFPWINTEGVALASYGLENEGW 217
>sp|Q96CU9|FXRD1_HUMAN FAD-dependent oxidoreductase domain-containing protein 1 OS=Homo
sapiens GN=FOXRED1 PE=1 SV=2
Length = 486
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 14 YARASTTLSVGGLRQQFSLRENIEMSLFGAEFLRNIKHHCHVIGEDEPDVNFTPNGYLFC 73
Y++AST LSVGG+ QQFSL ENI++SLF A FLRNI + V+ D+ F P+GYL
Sbjct: 103 YSQASTGLSVGGICQQFSLPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLL 162
Query: 74 ASQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEKEGW 128
AS+ AA +E N ++Q++ GAK L+ P+QL+ KFPW+NT+ +ALA G+E EGW
Sbjct: 163 ASEKDAAAMESNVKVQRQEGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGW 217
>sp|Q4R510|FXRD1_MACFA FAD-dependent oxidoreductase domain-containing protein 1 OS=Macaca
fascicularis GN=FOXRED1 PE=2 SV=1
Length = 486
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 82/115 (71%)
Query: 14 YARASTTLSVGGLRQQFSLRENIEMSLFGAEFLRNIKHHCHVIGEDEPDVNFTPNGYLFC 73
Y++AST LSVGG+ QQFSL ENI++SLF A FLRNI + V D+ F P+GYL
Sbjct: 103 YSQASTGLSVGGICQQFSLPENIQLSLFSASFLRNINEYLAVTNAPPLDLQFNPSGYLLL 162
Query: 74 ASQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEKEGW 128
AS+ AA +E N ++QK+ GAK L+ P+QL+ KFPW+NT+ +ALA G+E EGW
Sbjct: 163 ASEKDAAAMESNVKVQKQEGAKVCLMSPDQLRNKFPWINTEGVALASYGMENEGW 217
>sp|Q3TQB2|FXRD1_MOUSE FAD-dependent oxidoreductase domain-containing protein 1 OS=Mus
musculus GN=Foxred1 PE=2 SV=1
Length = 487
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 14 YARASTT-LSVGGLRQQFSLRENIEMSLFGAEFLRNIKHHCHVIGEDEPDVNFTPNGYLF 72
Y+RAS+T SVGG+ QQFS+ EN+++SLF FLRNI + V+ ++ F P+G L
Sbjct: 103 YSRASSTGPSVGGIWQQFSVPENVQLSLFSINFLRNINEYLAVVDAPPVELQFNPSGCLL 162
Query: 73 CASQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDIALACLGLEKEGW 128
AS+ AATLE N ++Q++ GAK L+ PEQL+ KFPW+N + +ALA GLE EGW
Sbjct: 163 LASEKDAATLENNVKMQRQEGAKVCLMSPEQLQTKFPWINVEGVALASYGLEDEGW 218
>sp|Q8KGD4|MURG_CHLTE UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Chlorobium tepidum (strain ATCC 49652 /
DSM 12025 / TLS) GN=murG PE=3 SV=1
Length = 364
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 23 VGGLRQQFSLRENIEMSLFGAEFLRNIKHHCHVIGEDEPDVNFTPNGY-----LFCASQD 77
V GL++ S+R +E +L +F +++ ++ +++PDV GY L A
Sbjct: 59 VRGLKRGLSIRALVENALILGDFAKSLSMAMALVRKEQPDVVVGTGGYVSAPLLLAAQLS 118
Query: 78 GAATL 82
G TL
Sbjct: 119 GKKTL 123
>sp|Q8NAP3|ZBT38_HUMAN Zinc finger and BTB domain-containing protein 38 OS=Homo sapiens
GN=ZBTB38 PE=1 SV=2
Length = 1195
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 20/87 (22%)
Query: 58 EDEPDVNFT--PNGYLFCASQDGAATLEKNHQLQKELGA-----------------KNVL 98
ED D NF+ P Y+FC ++ G EKN + +E N +
Sbjct: 120 EDLTDRNFSNSPGPYVFCITEKGVVKEEKNEKRHEEPAITNGPRITNAFSIIETENSNNM 179
Query: 99 LGPEQLKAKFPWLNTDDIALACLGLEK 125
P L+A F + +D + A L LE+
Sbjct: 180 FSPLDLRASFKKV-SDSMRTASLCLER 205
>sp|Q3HTN1|VM3SA_TRIST Zinc metalloproteinase-disintegrin stejnihagin-A OS=Trimeresurus
stejnegeri PE=2 SV=1
Length = 600
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 13 LYARASTTLSVGGLRQQFSLRENIEMSLFGAEFLRNIKHHCHVIGEDEPDVNFTPNG 69
+Y R TTL G L+Q + E + G + +++ + + ED + +++P+G
Sbjct: 34 VYPRKVTTLPKGALQQNYEDAMQYEFKVNGEPVVLHLEKNKELFSEDYSETHYSPDG 90
>sp|B0W010|RRF2M_CULQU Ribosome-releasing factor 2, mitochondrial OS=Culex
quinquefasciatus GN=CPIJ000374 PE=3 SV=1
Length = 749
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 1 MYAKHILASLVSLYARASTTLSVGGLRQQFS-LRENIEMSLFGAEFLRNIKHHCHVIGED 59
M A+H+ L L R L V QQ LR N ++ L + I
Sbjct: 665 MPAEHLNPILADLGKRRCEILDVTARGQQHKVLRANAPLA-----ELEDYSSEVRCISSG 719
Query: 60 EPDVNFTPNGYLFCASQDGAATLEKNHQLQ 89
V+ PNGY + D A+ + + H L+
Sbjct: 720 TASVSMEPNGYALLSEMDEASAIRRAHGLE 749
>sp|Q62868|ROCK2_RAT Rho-associated protein kinase 2 OS=Rattus norvegicus GN=Rock2 PE=1
SV=2
Length = 1388
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 14/95 (14%)
Query: 22 SVGGLRQQFSLRENIEMSLF------------GAEFLRNIKHHCHVIGEDEPDVNFTPNG 69
+ L ++ + R+N+E +L AE+ R H E DVN +
Sbjct: 480 TAKELEEEITFRKNVESTLRQLEREKALLQHKNAEYQRKADHEADKKRNLENDVNSLKDQ 539
Query: 70 Y--LFCASQDGAATLEKNHQLQKELGAKNVLLGPE 102
L +Q + EK +QLQK+L N LL E
Sbjct: 540 LEDLKKRNQSSQISTEKVNQLQKQLDEANALLRTE 574
>sp|A7I637|MCH_METB6 Methenyltetrahydromethanopterin cyclohydrolase OS=Methanoregula
boonei (strain 6A8) GN=mch PE=3 SV=1
Length = 314
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 92 LGAKNVLLGP-EQLKAKFPWLNTDDIALACLGLEKEGW 128
LG N +G ++ F +NTD ++ACLG +K GW
Sbjct: 60 LGEVNFRMGQIKEFPQPFIDVNTDFPSIACLGAQKAGW 97
>sp|B2A1G4|HEM1_NATTJ Glutamyl-tRNA reductase OS=Natranaerobius thermophilus (strain ATCC
BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=hemA PE=3 SV=1
Length = 458
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 60 EPDVNFTPNGYLFCASQDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDI 116
EP VN N YL+ D A +E N Q ++E L+ E++ W T D+
Sbjct: 288 EPSVNNQDNAYLYTID-DLEAVVESNMQERQEEARNAELIISEEVAEFMVWYKTRDV 343
>sp|Q99LB7|SARDH_MOUSE Sarcosine dehydrogenase, mitochondrial OS=Mus musculus GN=Sardh
PE=1 SV=1
Length = 919
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 68 NGYLFCAS-QDGAATLEKNHQLQKELGAKNVLLGPEQLKAKFPWLNTDDI 116
NG LF AS Q ++ L K G ++ +L P + K+ +P +N DD+
Sbjct: 151 NGGLFIASNQQRLNEYKRLMSLGKAYGIESHVLSPAETKSLYPLMNVDDL 200
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,962,627
Number of Sequences: 539616
Number of extensions: 1733326
Number of successful extensions: 3978
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3971
Number of HSP's gapped (non-prelim): 19
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)