Your job contains 1 sequence.
>psy10292
MGFLIGEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKN
PNVQLQVFKNMTPTPFITTYLENGSEMLIDVDNKSKDEIHDHVLKVLGKSEQVLKAEAIA
REKKDNPANFGFKCEKHCICQIPGQITCPGLVRLPDSMRGKKVNPQGY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10292
(168 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030572 - symbol:mRpS25 "mitochondrial ribosomal p... 547 8.0e-53 1
UNIPROTKB|P82663 - symbol:MRPS25 "28S ribosomal protein S... 451 1.2e-42 1
RGD|1308770 - symbol:Mrps25 "mitochondrial ribosomal prot... 447 3.2e-42 1
UNIPROTKB|P82669 - symbol:MRPS25 "28S ribosomal protein S... 443 8.4e-42 1
MGI|MGI:1928140 - symbol:Mrps25 "mitochondrial ribosomal ... 441 1.4e-41 1
UNIPROTKB|E1BSI6 - symbol:MRPS25 "Uncharacterized protein... 415 7.8e-39 1
ZFIN|ZDB-GENE-050417-52 - symbol:mrps25 "mitochondrial ri... 404 1.1e-37 1
WB|WBGene00021920 - symbol:mrps-25 species:6239 "Caenorha... 340 6.9e-31 1
UNIPROTKB|B4DFJ5 - symbol:MRPS25 "cDNA FLJ59193, highly s... 331 6.2e-30 1
UNIPROTKB|E7EPW2 - symbol:MRPS25 "28S ribosomal protein S... 325 2.7e-29 1
UNIPROTKB|B4DQG6 - symbol:MRPS25 "28S ribosomal protein S... 239 3.5e-20 1
UNIPROTKB|I3L6Z8 - symbol:MRPS25 "Uncharacterized protein... 235 9.2e-20 1
>FB|FBgn0030572 [details] [associations]
symbol:mRpS25 "mitochondrial ribosomal protein S25"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS;NAS] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISS;NAS]
[GO:0006412 "translation" evidence=ISS;NAS] Pfam:PF05047
GO:GO:0006412 EMBL:AE014298 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 GO:GO:0003735 GO:GO:0005763 InterPro:IPR007741
SMART:SM00916 CTD:64432 eggNOG:NOG330435
GeneTree:ENSGT00640000091558 OMA:DNPANFG EMBL:BT024442
EMBL:BT029396 RefSeq:NP_511153.1 UniGene:Dm.25389
ProteinModelPortal:Q9VY28 STRING:Q9VY28 PaxDb:Q9VY28 PRIDE:Q9VY28
EnsemblMetazoa:FBtr0073945 GeneID:32395 KEGG:dme:Dmel_CG14413
FlyBase:FBgn0030572 InParanoid:Q9VY28 OrthoDB:EOG4NCJW4
PhylomeDB:Q9VY28 GenomeRNAi:32395 NextBio:778246 Bgee:Q9VY28
GermOnline:CG14413 Uniprot:Q9VY28
Length = 167
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 93/161 (57%), Positives = 127/161 (78%)
Query: 1 MGFLIGEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKN 60
M F+ G PIRRTLKYLNAG++V KDK++IF++NYN +H GA++FVFW+ QIQFKN
Sbjct: 1 MPFMKGREPIRRTLKYLNAGKLVLKDKVRIFSVNYNTYGAHHAGARDFVFWNIPQIQFKN 60
Query: 61 PNVQLQVFKNMTPTPFITTYLENGSEMLIDVDNKSKDEIHDHVLKVLGKSEQVLKAEAIA 120
P VQ+ KNMTP+PF+ Y ++G +MLID+D++++++I DH++KV+GK+ + L AE
Sbjct: 61 PEVQVLTLKNMTPSPFVRCYFDDGRDMLIDLDSRNRNDIIDHLVKVVGKTREQLDAEERL 120
Query: 121 REKKDNPANFGFKCEKHCICQIPGQITCPGLVRLPDSMRGK 161
+E KDNPANFG+ C +HCIC+IPGQ+ CPG V LPD MRGK
Sbjct: 121 KESKDNPANFGYGCGRHCICEIPGQVPCPGTVPLPDHMRGK 161
>UNIPROTKB|P82663 [details] [associations]
symbol:MRPS25 "28S ribosomal protein S25, mitochondrial"
species:9606 "Homo sapiens" [GO:0005763 "mitochondrial small
ribosomal subunit" evidence=NAS] [GO:0006412 "translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] Pfam:PF05047 GO:GO:0006412
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0003735
GO:GO:0005763 InterPro:IPR007741 SMART:SM00916 CTD:64432
eggNOG:NOG330435 HOGENOM:HOG000007270 HOVERGEN:HBG002378
OMA:DNPANFG OrthoDB:EOG4K3KXG EMBL:AK024702 EMBL:AK024433
EMBL:BC003590 IPI:IPI00013167 RefSeq:NP_071942.1 UniGene:Hs.715617
ProteinModelPortal:P82663 IntAct:P82663 STRING:P82663 DMDM:13633894
PaxDb:P82663 PRIDE:P82663 DNASU:64432 Ensembl:ENST00000253686
GeneID:64432 KEGG:hsa:64432 UCSC:uc003bzl.3 GeneCards:GC03M015083
HGNC:HGNC:14511 HPA:HPA043490 MIM:611987 neXtProt:NX_P82663
PharmGKB:PA31013 InParanoid:P82663 PhylomeDB:P82663 ChiTaRS:MRPS25
GenomeRNAi:64432 NextBio:66453 ArrayExpress:P82663 Bgee:P82663
CleanEx:HS_MRPS25 Genevestigator:P82663 GermOnline:ENSG00000131368
Uniprot:P82663
Length = 173
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 79/158 (50%), Positives = 116/158 (73%)
Query: 6 GEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKNPNVQL 65
G PIRRTL+YL+ G +VFKD +K+ +NYN + E GA++FVF++ QIQ+KNP VQ+
Sbjct: 5 GRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQI 64
Query: 66 QVFKNMTPTPFITTYLENGSEMLIDVDNKSKDEIHDHVLKVLGKSEQVLKAEAIAREKKD 125
+FKNMTP+PF+ YL++G ++L+DV+ KS EI +H+ K+LGK+E+ L+ E +++
Sbjct: 65 MMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKNEETLREEEEEKKQLS 124
Query: 126 NPANFGFK--CEKHCICQIPGQITCPGLVRLPDSMRGK 161
+PANFG + C + CIC++ GQ+ CP LV LP MRGK
Sbjct: 125 HPANFGPRKYCLRECICEVEGQVPCPSLVPLPKEMRGK 162
>RGD|1308770 [details] [associations]
symbol:Mrps25 "mitochondrial ribosomal protein S25"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005840 "ribosome" evidence=IEA] RGD:1308770 Pfam:PF05047
GO:GO:0005739 Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
GO:GO:0005840 InterPro:IPR007741 SMART:SM00916 CTD:64432
eggNOG:NOG330435 GeneTree:ENSGT00640000091558 HOGENOM:HOG000007270
HOVERGEN:HBG002378 OMA:DNPANFG OrthoDB:EOG4K3KXG EMBL:BC097381
IPI:IPI00215085 RefSeq:NP_001020579.1 UniGene:Rn.3814
ProteinModelPortal:Q4QR80 STRING:Q4QR80 Ensembl:ENSRNOT00000014933
GeneID:297459 KEGG:rno:297459 UCSC:RGD:1308770 InParanoid:Q4QR80
NextBio:642301 Genevestigator:Q4QR80 GermOnline:ENSRNOG00000010912
Uniprot:Q4QR80
Length = 171
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 77/158 (48%), Positives = 116/158 (73%)
Query: 6 GEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKNPNVQL 65
G PIRRTL+YL +G +VFK+ +K+ +NYN + E GA++FVF++ QIQ+KNP VQ+
Sbjct: 5 GRFPIRRTLQYLGSGDVVFKESVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQI 64
Query: 66 QVFKNMTPTPFITTYLENGSEMLIDVDNKSKDEIHDHVLKVLGKSEQVLKAEAIAREKKD 125
+FKNMTP+PF+ YLE+G ++L+DV+ KS EI +H+ K+LGK E+ L+ E + ++++
Sbjct: 65 MLFKNMTPSPFLRFYLESGEQVLVDVETKSNTEIVEHIKKILGKKEETLREEELEKQQRF 124
Query: 126 NPANFGFK--CEKHCICQIPGQITCPGLVRLPDSMRGK 161
+P NFG + C + C+C++ GQ+ CPGLV LP M GK
Sbjct: 125 HPGNFGPRKYCLRECMCEVEGQVPCPGLVPLPKEMTGK 162
>UNIPROTKB|P82669 [details] [associations]
symbol:MRPS25 "28S ribosomal protein S25, mitochondrial"
species:9913 "Bos taurus" [GO:0003735 "structural constituent of
ribosome" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] Pfam:PF05047 GO:GO:0005739
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005840
GO:GO:0003735 InterPro:IPR007741 SMART:SM00916 EMBL:BC108214
IPI:IPI00691760 RefSeq:NP_001069447.1 UniGene:Bt.91796
ProteinModelPortal:P82669 PRIDE:P82669 Ensembl:ENSBTAT00000018234
GeneID:533011 KEGG:bta:533011 CTD:64432 eggNOG:NOG330435
GeneTree:ENSGT00640000091558 HOGENOM:HOG000007270
HOVERGEN:HBG002378 InParanoid:P82669 OMA:DNPANFG OrthoDB:EOG4K3KXG
NextBio:20875878 Uniprot:P82669
Length = 173
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 79/158 (50%), Positives = 115/158 (72%)
Query: 6 GEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKNPNVQL 65
G PIRRTL+YL+ G +VFKD +K+ +NYN + E GA++FVF++ QIQ+KNP VQ+
Sbjct: 5 GRFPIRRTLQYLSQGDVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQI 64
Query: 66 QVFKNMTPTPFITTYLENGSEMLIDVDNKSKDEIHDHVLKVLGKSEQVLKAEAIAREKKD 125
+FKNMTPTPF+ YL++G ++L+DV+ KS EI +HV K+LGK+E+ L+ E RE+
Sbjct: 65 MLFKNMTPTPFLRFYLDSGEQVLVDVETKSNKEIMEHVKKILGKNEETLRRERQEREQLS 124
Query: 126 NPANFGFK--CEKHCICQIPGQITCPGLVRLPDSMRGK 161
+PA+FG + C + CIC++ GQ+ CP +V LP + GK
Sbjct: 125 HPAHFGPRKYCLRECICEVEGQVPCPAVVPLPRELTGK 162
>MGI|MGI:1928140 [details] [associations]
symbol:Mrps25 "mitochondrial ribosomal protein S25"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] MGI:MGI:1928140 Pfam:PF05047
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0003735
GO:GO:0005763 InterPro:IPR007741 SMART:SM00916 CTD:64432
eggNOG:NOG330435 GeneTree:ENSGT00640000091558 HOGENOM:HOG000007270
HOVERGEN:HBG002378 OMA:DNPANFG OrthoDB:EOG4K3KXG EMBL:AK004037
EMBL:AK013196 EMBL:BC022953 IPI:IPI00315671 RefSeq:NP_079854.2
UniGene:Mm.476867 ProteinModelPortal:Q9D125 PaxDb:Q9D125
PRIDE:Q9D125 Ensembl:ENSMUST00000140438 GeneID:64658 KEGG:mmu:64658
UCSC:uc009cyu.1 InParanoid:Q9D125 NextBio:320147 Bgee:Q9D125
CleanEx:MM_MRPS25 Genevestigator:Q9D125
GermOnline:ENSMUSG00000014551 Uniprot:Q9D125
Length = 171
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 77/158 (48%), Positives = 114/158 (72%)
Query: 6 GEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKNPNVQL 65
G PIRRTL+YL G +VFK+ +KI +NYN E GA++FVF++ QIQ+KNP VQ+
Sbjct: 5 GRFPIRRTLQYLGRGDVVFKESVKIMTVNYNTYGELGEGARKFVFFNIPQIQYKNPWVQI 64
Query: 66 QVFKNMTPTPFITTYLENGSEMLIDVDNKSKDEIHDHVLKVLGKSEQVLKAEAIAREKKD 125
+FKNMTP+PF+ YL++G ++L+DV+ KS EI +H+ K+LGK E+ L+ E + ++++
Sbjct: 65 MMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIKKILGKKEETLREEELEKQQRF 124
Query: 126 NPANFGFK--CEKHCICQIPGQITCPGLVRLPDSMRGK 161
+P NFG + C + C+C++ GQ+ CPGLV LP M GK
Sbjct: 125 HPGNFGPRKYCLRECMCEVEGQVPCPGLVPLPKEMTGK 162
>UNIPROTKB|E1BSI6 [details] [associations]
symbol:MRPS25 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
Pfam:PF05047 GO:GO:0005739 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 InterPro:IPR007741 SMART:SM00916 CTD:64432
GeneTree:ENSGT00640000091558 OMA:DNPANFG EMBL:AADN02014532
IPI:IPI00603521 RefSeq:XP_414461.2 UniGene:Gga.6989
Ensembl:ENSGALT00000013856 GeneID:416129 KEGG:gga:416129
NextBio:20819636 Uniprot:E1BSI6
Length = 173
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 73/158 (46%), Positives = 111/158 (70%)
Query: 6 GEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKNPNVQL 65
G P+RRTL+YL+ G ++FK +K+ +NYN E GA++FVF++ QIQ+KNP VQ+
Sbjct: 5 GRFPVRRTLQYLSQGDVIFKSSVKVMTVNYNTAGEPSEGARKFVFFNIPQIQYKNPWVQI 64
Query: 66 QVFKNMTPTPFITTYLENGSEMLIDVDNKSKDEIHDHVLKVLGKSEQVLKAEAIAREKKD 125
+ +NMTP+PF+ YL++G ++L+DV++K+ EI +H+ ++LGKS++ L+ E REK
Sbjct: 65 MLLRNMTPSPFLRFYLDSGEQVLVDVEDKTNKEITEHIKRILGKSKETLEKEEREREKLS 124
Query: 126 NPANFGFKCE--KHCICQIPGQITCPGLVRLPDSMRGK 161
+PA FG K + C+C+I GQ+ CP V LP MRGK
Sbjct: 125 HPATFGPKKYHLRECMCEIEGQVPCPAFVPLPKEMRGK 162
>ZFIN|ZDB-GENE-050417-52 [details] [associations]
symbol:mrps25 "mitochondrial ribosomal protein S25"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] Pfam:PF05047 ZFIN:ZDB-GENE-050417-52 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005840 InterPro:IPR007741
SMART:SM00916 CTD:64432 eggNOG:NOG330435
GeneTree:ENSGT00640000091558 HOGENOM:HOG000007270
HOVERGEN:HBG002378 OMA:DNPANFG OrthoDB:EOG4K3KXG EMBL:FP017199
EMBL:BC092991 IPI:IPI00570100 RefSeq:NP_001017590.1
UniGene:Dr.43027 Ensembl:ENSDART00000060542 GeneID:550252
KEGG:dre:550252 InParanoid:Q567W4 NextBio:20879515 Uniprot:Q567W4
Length = 173
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 76/158 (48%), Positives = 110/158 (69%)
Query: 6 GEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKNPNVQL 65
G PIRRTL+YL G +VFK ++I +NYN + + GA+ FVF+ QIQ++NP VQ+
Sbjct: 5 GRFPIRRTLEYLQKGEVVFKKSVRIMTVNYNTHGDLSEGARSFVFFKIPQIQYRNPWVQI 64
Query: 66 QVFKNMTPTPFITTYLENGSEMLIDVDNKSKDEIHDHVLKVLGKSEQVLKAEAIAREKKD 125
+FKNMTP+PF+ YL++G ++L+DV+ K EI +HV K+LGK+++VL+AEA A+ +
Sbjct: 65 MMFKNMTPSPFLRFYLDDGEQVLVDVEGKHYKEITEHVKKILGKTDEVLQAEAAAKMELF 124
Query: 126 NPANFGFKCE--KHCICQIPGQITCPGLVRLPDSMRGK 161
NPANFG K + C+ ++ GQ+ PG V LP M GK
Sbjct: 125 NPANFGPKKYFLRECMSEVEGQVPHPGRVPLPKEMTGK 162
>WB|WBGene00021920 [details] [associations]
symbol:mrps-25 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] Pfam:PF05047 GO:GO:0005739 GO:GO:0009792
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005840
EMBL:FO081813 InterPro:IPR007741 SMART:SM00916 eggNOG:NOG330435
GeneTree:ENSGT00640000091558 HOGENOM:HOG000007270 OMA:DNPANFG
RefSeq:NP_500032.1 ProteinModelPortal:Q9N361 PaxDb:Q9N361
EnsemblMetazoa:Y55F3AM.1.1 EnsemblMetazoa:Y55F3AM.1.2 GeneID:176926
KEGG:cel:CELE_Y55F3AM.1 UCSC:Y55F3AM.1.1 CTD:176926
WormBase:Y55F3AM.1 InParanoid:Q9N361 NextBio:894614 Uniprot:Q9N361
Length = 170
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 63/162 (38%), Positives = 98/162 (60%)
Query: 1 MGFLIGEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFN-AENHRGAKEFVFWHFTQIQFK 59
M F+ G P+RRT YL G++ +D + +F++ ++ N GA++FV+W++ Q+Q+
Sbjct: 1 MPFMHGSMPLRRTFFYLQQGKVKLRDNVNVFSMGFHKNPTPEQSGARDFVYWNWAQLQYH 60
Query: 60 NPNVQLQVFKNMTPTPFITTYLENGSEMLIDVDNKSKDEIHDHVLKVLGKSEQVLKAEAI 119
NP VQL + TPF YL +G E+L D+D ++EI + K LGK+E V + E +
Sbjct: 61 NPKVQLVKHADKVVTPFARAYLNDGREVLFDLDGMKREEIEKLLAKTLGKTELVERREHL 120
Query: 120 AREKKDNPANFGFKCEKHCICQIPGQITCPGLVRLPDSMRGK 161
K NPA+FG K E+ C+C++ GQ C GL+R P + GK
Sbjct: 121 ESIAKLNPADFGSKNERQCMCEVQGQHPCTGLLRAPQCVTGK 162
>UNIPROTKB|B4DFJ5 [details] [associations]
symbol:MRPS25 "cDNA FLJ59193, highly similar to
Mitochondrial 28S ribosomal protein S25" species:9606 "Homo
sapiens" [GO:0005840 "ribosome" evidence=IEA] Pfam:PF05047
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005840
EMBL:AC090954 InterPro:IPR007741 SMART:SM00916 HOGENOM:HOG000007270
HOVERGEN:HBG002378 UniGene:Hs.715617 HGNC:HGNC:14511 ChiTaRS:MRPS25
EMBL:AK294123 IPI:IPI00796072 STRING:B4DFJ5 Ensembl:ENST00000449354
UCSC:uc011avm.1 Uniprot:B4DFJ5
Length = 145
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 58/111 (52%), Positives = 84/111 (75%)
Query: 6 GEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKNPNVQL 65
G PIRRTL+YL+ G +VFKD +K+ +NYN + E GA++FVF++ QIQ+KNP VQ+
Sbjct: 5 GRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQI 64
Query: 66 QVFKNMTPTPFITTYLENGSEMLIDVDNKSKDEIHDHVLKVLGKSEQVLKA 116
+FKNMTP+PF+ YL++G ++L+DV+ KS EI +H+ K+LGK+E L A
Sbjct: 65 MMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKNEHYLAA 115
>UNIPROTKB|E7EPW2 [details] [associations]
symbol:MRPS25 "28S ribosomal protein S25, mitochondrial"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] Pfam:PF05047 GO:GO:0005739 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 EMBL:AC090954 InterPro:IPR007741
SMART:SM00916 HGNC:HGNC:14511 ChiTaRS:MRPS25 IPI:IPI00926139
Ensembl:ENST00000420267 Ensembl:ENST00000447299 Uniprot:E7EPW2
Length = 110
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 56/106 (52%), Positives = 82/106 (77%)
Query: 6 GEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKNPNVQL 65
G PIRRTL+YL+ G +VFKD +K+ +NYN + E GA++FVF++ QIQ+KNP VQ+
Sbjct: 5 GRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQI 64
Query: 66 QVFKNMTPTPFITTYLENGSEMLIDVDNKSKDEIHDHVLKVLGKSE 111
+FKNMTP+PF+ YL++G ++L+DV+ KS EI +H+ K+LGK+E
Sbjct: 65 MMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKNE 110
>UNIPROTKB|B4DQG6 [details] [associations]
symbol:MRPS25 "28S ribosomal protein S25, mitochondrial"
species:9606 "Homo sapiens" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF05047 Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
GO:GO:0005840 EMBL:AC090954 InterPro:IPR007741 SMART:SM00916
HOGENOM:HOG000007270 HOVERGEN:HBG002378 UniGene:Hs.715617
HGNC:HGNC:14511 ChiTaRS:MRPS25 EMBL:AK298791 IPI:IPI00927346
STRING:B4DQG6 Ensembl:ENST00000444840 UCSC:uc011avl.2
Uniprot:B4DQG6
Length = 129
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 42/76 (55%), Positives = 58/76 (76%)
Query: 6 GEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKNPNVQL 65
G PIRRTL+YL+ G +VFKD +K+ +NYN + E GA++FVF++ QIQ+KNP VQ+
Sbjct: 5 GRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQI 64
Query: 66 QVFKNMTPTPFITTYL 81
+FKNMTP+PF+ YL
Sbjct: 65 MMFKNMTPSPFLRFYL 80
>UNIPROTKB|I3L6Z8 [details] [associations]
symbol:MRPS25 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF05047
GO:GO:0005739 Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
InterPro:IPR007741 GeneTree:ENSGT00640000091558 EMBL:CU856531
RefSeq:XP_003358580.1 Ensembl:ENSSSCT00000025590 GeneID:100628134
KEGG:ssc:100628134 Uniprot:I3L6Z8
Length = 96
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 6 GEAPIRRTLKYLNAGRIVFKDKIKIFAINYNFNAENHRGAKEFVFWHFTQIQFKNPNVQL 65
G PIRRTL+YL G +VFKD +K+ +NYN + E GA++FVF++ QIQ+KNP VQ+
Sbjct: 5 GRFPIRRTLQYLGQGDVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQI 64
Query: 66 QVFKNMTPTPFITTYL 81
+FKNMTP+PF+ YL
Sbjct: 65 TMFKNMTPSPFLRFYL 80
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.139 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 168 168 0.00079 108 3 11 22 0.37 32
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 583 (62 KB)
Total size of DFA: 157 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.85u 0.10s 16.95t Elapsed: 00:00:01
Total cpu time: 16.85u 0.10s 16.95t Elapsed: 00:00:01
Start: Thu Aug 15 14:49:23 2013 End: Thu Aug 15 14:49:24 2013