Your job contains 1 sequence.
>psy10293
MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQMEKKKEAIESTLLDKNV
KKKIEREEERLKNNNKDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPISWV
QGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQPKP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10293
(179 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032746 - symbol:CG10470 species:7227 "Drosophila ... 652 6.0e-64 1
UNIPROTKB|E1C8A8 - symbol:TMCO1 "Uncharacterized protein"... 607 3.5e-59 1
ZFIN|ZDB-GENE-050417-344 - symbol:tmco1 "transmembrane an... 605 5.7e-59 1
UNIPROTKB|Q3T0N3 - symbol:TMCO1 "Transmembrane and coiled... 596 5.1e-58 1
UNIPROTKB|E2RGT2 - symbol:TMCO1 "Uncharacterized protein"... 596 5.1e-58 1
UNIPROTKB|J9JIE6 - symbol:TMCO1 "Transmembrane and coiled... 596 5.1e-58 1
UNIPROTKB|Q9UM00 - symbol:TMCO1 "Transmembrane and coiled... 596 5.1e-58 1
UNIPROTKB|C5HGF3 - symbol:TMCO1 "Transmembrane and coiled... 596 5.1e-58 1
MGI|MGI:1921173 - symbol:Tmco1 "transmembrane and coiled-... 596 5.1e-58 1
RGD|1359178 - symbol:Tmco1 "transmembrane and coiled-coil... 596 5.1e-58 1
WB|WBGene00009045 - symbol:F22B5.10 species:6239 "Caenorh... 491 6.9e-47 1
UNIPROTKB|J3KS45 - symbol:TMCO1 "Transmembrane and coiled... 420 2.3e-39 1
UNIPROTKB|J3QQY2 - symbol:TMCO1 "Transmembrane and coiled... 411 2.1e-38 1
TAIR|locus:2088634 - symbol:AT3G12030 "AT3G12030" species... 362 3.2e-33 1
TAIR|locus:2144173 - symbol:AT5G06660 "AT5G06660" species... 362 3.2e-33 1
DICTYBASE|DDB_G0281489 - symbol:DDB_G0281489 "transmembra... 358 8.5e-33 1
UNIPROTKB|J3KTQ7 - symbol:TMCO1 "Transmembrane and coiled... 204 1.8e-16 1
UNIPROTKB|J3QRB3 - symbol:TMCO1 "Transmembrane and coiled... 191 4.2e-15 1
>FB|FBgn0032746 [details] [associations]
symbol:CG10470 species:7227 "Drosophila melanogaster"
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002809
InterPro:IPR008559 Pfam:PF01956 PIRSF:PIRSF023322 EMBL:AE014134
GO:GO:0016020 GeneTree:ENSGT00390000002659 OMA:LSLVKMK
PANTHER:PTHR20917 FlyBase:FBgn0032746 EMBL:BT023490
RefSeq:NP_609936.1 UniGene:Dm.6502 IntAct:Q9VJ11 MINT:MINT-831635
STRING:Q9VJ11 EnsemblMetazoa:FBtr0081146 GeneID:35174
KEGG:dme:Dmel_CG10470 UCSC:CG10470-RA InParanoid:Q9VJ11
GenomeRNAi:35174 NextBio:792223 Uniprot:Q9VJ11
Length = 183
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 126/180 (70%), Positives = 146/180 (81%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLD 57
MW+DT+LIVFISVCTA L EGLTW++VYRTEKYQKLKTE+EKQ +E++KE I LD
Sbjct: 1 MWSDTILIVFISVCTAFLGEGLTWVMVYRTEKYQKLKTEVEKQSKKLERRKE-IHGDSLD 59
Query: 58 XXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
DL++VKMK+MFA GFAFTALLSMFN+IFDG++VA+LPFTPI
Sbjct: 60 KAVKKKIERDEEKLKNNNRDLSLVKMKTMFATGFAFTALLSMFNSIFDGRVVAQLPFTPI 119
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQP 177
SW+QGLSHRNLSG+DYTDCSFIFLYILCTMSIRQNIQK+LGFAPSR A+KQG G+FG P
Sbjct: 120 SWIQGLSHRNLSGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGVGLFGPAP 179
>UNIPROTKB|E1C8A8 [details] [associations]
symbol:TMCO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016020 "membrane" evidence=IEA] InterPro:IPR002809
InterPro:IPR008559 Pfam:PF01956 PIRSF:PIRSF023322 GO:GO:0016020
CTD:54499 GeneTree:ENSGT00390000002659 OMA:LSLVKMK
PANTHER:PTHR20917 EMBL:AADN02034084 EMBL:AADN02034085
EMBL:AADN02034086 EMBL:AADN02034087 EMBL:AADN02034088
EMBL:AADN02034089 IPI:IPI00601745 RefSeq:XP_424693.2
UniGene:Gga.49624 Ensembl:ENSGALT00000004284 GeneID:427100
KEGG:gga:427100 NextBio:20828421 Uniprot:E1C8A8
Length = 188
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 120/181 (66%), Positives = 140/181 (77%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLD 57
M+ADTLLIVFISVCTALL+EG+TW+LVYRT+KY++LK E+EKQ +EKKKE I +
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA-G 62
Query: 58 XXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
DL+MV+MKSMFAIGF FTAL+ MFN+IFDG++VAKLPF P+
Sbjct: 63 RQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFIPL 122
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQP 177
S++QGLSHRNL GEDYTDCSFIFLYILCTMSIRQNIQKMLG APSR A KQ GG G P
Sbjct: 123 SYIQGLSHRNLLGEDYTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGPPP 182
Query: 178 K 178
+
Sbjct: 183 Q 183
>ZFIN|ZDB-GENE-050417-344 [details] [associations]
symbol:tmco1 "transmembrane and coiled-coil domains
1" species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002809 InterPro:IPR008559
Pfam:PF01956 PIRSF:PIRSF023322 ZFIN:ZDB-GENE-050417-344
GO:GO:0016021 EMBL:BX927144 CTD:54499 GeneTree:ENSGT00390000002659
HOVERGEN:HBG054437 OMA:LSLVKMK PANTHER:PTHR20917 EMBL:BC076218
EMBL:BC152265 IPI:IPI00501754 RefSeq:NP_001002575.1
UniGene:Dr.13739 Ensembl:ENSDART00000100276 GeneID:378980
KEGG:dre:378980 InParanoid:Q6DGW9 NextBio:20813916 Uniprot:Q6DGW9
Length = 188
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 118/181 (65%), Positives = 140/181 (77%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLD 57
M+ADT+LIVFIS+CTALL+EG+TW+LVYRT+KY++LK E+EKQ +EKKKE I +
Sbjct: 4 MFADTILIVFISICTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA-G 62
Query: 58 XXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
DL+MV+MKSMFAIGF FTAL+ MFN+IFDG++VAKLPF P+
Sbjct: 63 RQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFVPL 122
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQP 177
S++QGLSHRNL GEDYTDCSFIFLYILCTMSIRQNIQKMLG APSR A KQ GG G P
Sbjct: 123 SYIQGLSHRNLLGEDYTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGPPP 182
Query: 178 K 178
+
Sbjct: 183 Q 183
>UNIPROTKB|Q3T0N3 [details] [associations]
symbol:TMCO1 "Transmembrane and coiled-coil
domain-containing protein 1" species:9913 "Bos taurus" [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR002809 InterPro:IPR008559 Pfam:PF01956
PIRSF:PIRSF023322 GO:GO:0016021 GO:GO:0000139 GO:GO:0005789
EMBL:BC102321 IPI:IPI00695865 RefSeq:NP_001029938.1
UniGene:Bt.10047 ProteinModelPortal:Q3T0N3 PRIDE:Q3T0N3
Ensembl:ENSBTAT00000013200 GeneID:614715 KEGG:bta:614715 CTD:54499
eggNOG:NOG301636 GeneTree:ENSGT00390000002659 HOGENOM:HOG000240371
HOVERGEN:HBG054437 InParanoid:Q3T0N3 OMA:LSLVKMK OrthoDB:EOG4R5040
NextBio:20899245 PANTHER:PTHR20917 Uniprot:Q3T0N3
Length = 188
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 118/180 (65%), Positives = 139/180 (77%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLD 57
M+ADTLLIVFISVCTALL+EG+TW+LVYRT+KY++LK E+EKQ +EKKKE I +
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA-G 62
Query: 58 XXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
DL+MV+MKSMFAIGF FTAL+ MFN+IFDG++VAKLPFTP+
Sbjct: 63 RQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPL 122
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQP 177
S++QGLSHRNL G+D TDCSFIFLYILCTMSIRQNIQK+LG APSR A KQ GG G P
Sbjct: 123 SYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPPP 182
>UNIPROTKB|E2RGT2 [details] [associations]
symbol:TMCO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR002809 InterPro:IPR008559 Pfam:PF01956
PIRSF:PIRSF023322 GO:GO:0016020 CTD:54499
GeneTree:ENSGT00390000002659 OMA:LSLVKMK PANTHER:PTHR20917
EMBL:AAEX03018384 RefSeq:XP_549626.2 ProteinModelPortal:E2RGT2
Ensembl:ENSCAFT00000021367 GeneID:478992 KEGG:cfa:478992
Uniprot:E2RGT2
Length = 188
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 118/180 (65%), Positives = 139/180 (77%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLD 57
M+ADTLLIVFISVCTALL+EG+TW+LVYRT+KY++LK E+EKQ +EKKKE I +
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA-G 62
Query: 58 XXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
DL+MV+MKSMFAIGF FTAL+ MFN+IFDG++VAKLPFTP+
Sbjct: 63 RQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPL 122
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQP 177
S++QGLSHRNL G+D TDCSFIFLYILCTMSIRQNIQK+LG APSR A KQ GG G P
Sbjct: 123 SYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPPP 182
>UNIPROTKB|J9JIE6 [details] [associations]
symbol:TMCO1 "Transmembrane and coiled-coil
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002809
InterPro:IPR008559 Pfam:PF01956 PIRSF:PIRSF023322 GO:GO:0016021
EMBL:CH471067 EMBL:AL451074 CTD:54499 PANTHER:PTHR20917
RefSeq:NP_061899.2 GeneID:54499 KEGG:hsa:54499 HGNC:HGNC:18188
Ensembl:ENST00000367881 Uniprot:J9JIE6
Length = 239
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 118/180 (65%), Positives = 139/180 (77%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLD 57
M+ADTLLIVFISVCTALL+EG+TW+LVYRT+KY++LK E+EKQ +EKKKE I +
Sbjct: 55 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA-G 113
Query: 58 XXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
DL+MV+MKSMFAIGF FTAL+ MFN+IFDG++VAKLPFTP+
Sbjct: 114 RQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPL 173
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQP 177
S++QGLSHRNL G+D TDCSFIFLYILCTMSIRQNIQK+LG APSR A KQ GG G P
Sbjct: 174 SYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPPP 233
>UNIPROTKB|Q9UM00 [details] [associations]
symbol:TMCO1 "Transmembrane and coiled-coil
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] InterPro:IPR002809 InterPro:IPR008559
Pfam:PF01956 PIRSF:PIRSF023322 GO:GO:0016021 GO:GO:0000139
GO:GO:0005789 EMBL:AL451074 CTD:54499 eggNOG:NOG301636
HOGENOM:HOG000240371 HOVERGEN:HBG054437 OMA:LSLVKMK
OrthoDB:EOG4R5040 PANTHER:PTHR20917 EMBL:AB020980 EMBL:AY763589
EMBL:AF070626 EMBL:AF274935 EMBL:AF277194 EMBL:AY359027
EMBL:AK316610 EMBL:BC000104 IPI:IPI00026111 IPI:IPI00761107
RefSeq:NP_061899.2 UniGene:Hs.31498 ProteinModelPortal:Q9UM00
IntAct:Q9UM00 STRING:Q9UM00 PhosphoSite:Q9UM00 DMDM:74753399
PaxDb:Q9UM00 PRIDE:Q9UM00 DNASU:54499 Ensembl:ENST00000392129
GeneID:54499 KEGG:hsa:54499 UCSC:uc001gdj.4 GeneCards:GC01M165693
HGNC:HGNC:18188 HPA:HPA038775 MIM:614123 MIM:614132
neXtProt:NX_Q9UM00 Orphanet:228407 PharmGKB:PA142670792
InParanoid:Q9UM00 PhylomeDB:Q9UM00 GenomeRNAi:54499 NextBio:56846
ArrayExpress:Q9UM00 Bgee:Q9UM00 CleanEx:HS_TMCO1
Genevestigator:Q9UM00 GermOnline:ENSG00000143183 Uniprot:Q9UM00
Length = 188
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 118/180 (65%), Positives = 139/180 (77%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLD 57
M+ADTLLIVFISVCTALL+EG+TW+LVYRT+KY++LK E+EKQ +EKKKE I +
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA-G 62
Query: 58 XXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
DL+MV+MKSMFAIGF FTAL+ MFN+IFDG++VAKLPFTP+
Sbjct: 63 RQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPL 122
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQP 177
S++QGLSHRNL G+D TDCSFIFLYILCTMSIRQNIQK+LG APSR A KQ GG G P
Sbjct: 123 SYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPPP 182
>UNIPROTKB|C5HGF3 [details] [associations]
symbol:TMCO1 "Transmembrane and coiled-coil domains protein
1" species:9823 "Sus scrofa" [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002809
InterPro:IPR008559 Pfam:PF01956 PIRSF:PIRSF023322 GO:GO:0016021
GO:GO:0000139 GO:GO:0005789 CTD:54499 eggNOG:NOG301636
GeneTree:ENSGT00390000002659 OMA:LSLVKMK PANTHER:PTHR20917
EMBL:CU468388 EMBL:CU468989 EMBL:FJ440337 RefSeq:NP_001161057.1
UniGene:Ssc.21991 ProteinModelPortal:C5HGF3 PRIDE:C5HGF3
Ensembl:ENSSSCT00000006931 GeneID:100151809 KEGG:ssc:100151809
Uniprot:C5HGF3
Length = 188
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 118/180 (65%), Positives = 139/180 (77%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLD 57
M+ADTLLIVFISVCTALL+EG+TW+LVYRT+KY++LK E+EKQ +EKKKE I +
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA-G 62
Query: 58 XXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
DL+MV+MKSMFAIGF FTAL+ MFN+IFDG++VAKLPFTP+
Sbjct: 63 RQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPL 122
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQP 177
S++QGLSHRNL G+D TDCSFIFLYILCTMSIRQNIQK+LG APSR A KQ GG G P
Sbjct: 123 SYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPPP 182
>MGI|MGI:1921173 [details] [associations]
symbol:Tmco1 "transmembrane and coiled-coil domains 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR002809 InterPro:IPR008559 Pfam:PF01956
PIRSF:PIRSF023322 MGI:MGI:1921173 GO:GO:0016021 GO:GO:0000139
GO:GO:0005789 CTD:54499 eggNOG:NOG301636
GeneTree:ENSGT00390000002659 HOGENOM:HOG000240371
HOVERGEN:HBG054437 OMA:LSLVKMK OrthoDB:EOG4R5040 PANTHER:PTHR20917
EMBL:AK037709 EMBL:AK162344 EMBL:BC011457 EMBL:BC019761
EMBL:BC020098 IPI:IPI00121974 RefSeq:NP_001034572.1
UniGene:Mm.330045 ProteinModelPortal:Q921L3 STRING:Q921L3
PhosphoSite:Q921L3 PaxDb:Q921L3 PRIDE:Q921L3
Ensembl:ENSMUST00000097473 GeneID:68944 KEGG:mmu:68944
UCSC:uc007dkv.1 InParanoid:Q921L3 NextBio:328245 Bgee:Q921L3
CleanEx:MM_TMCO1 Genevestigator:Q921L3
GermOnline:ENSMUSG00000052428 Uniprot:Q921L3
Length = 188
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 118/180 (65%), Positives = 139/180 (77%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLD 57
M+ADTLLIVFISVCTALL+EG+TW+LVYRT+KY++LK E+EKQ +EKKKE I +
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA-G 62
Query: 58 XXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
DL+MV+MKSMFAIGF FTAL+ MFN+IFDG++VAKLPFTP+
Sbjct: 63 RQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPL 122
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQP 177
S++QGLSHRNL G+D TDCSFIFLYILCTMSIRQNIQK+LG APSR A KQ GG G P
Sbjct: 123 SYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPPP 182
>RGD|1359178 [details] [associations]
symbol:Tmco1 "transmembrane and coiled-coil domains 1"
species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR002809 InterPro:IPR008559 Pfam:PF01956
PIRSF:PIRSF023322 RGD:1359178 GO:GO:0016021 GO:GO:0000139
GO:GO:0005789 CTD:54499 eggNOG:NOG301636
GeneTree:ENSGT00390000002659 HOGENOM:HOG000240371
HOVERGEN:HBG054437 OMA:LSLVKMK PANTHER:PTHR20917 EMBL:BC088319
EMBL:AF531432 IPI:IPI00203757 RefSeq:NP_001009631.1
RefSeq:XP_003751315.1 UniGene:Rn.89308 ProteinModelPortal:Q5I0H4
STRING:Q5I0H4 PRIDE:Q5I0H4 Ensembl:ENSRNOT00000005277 GeneID:289196
KEGG:rno:289196 UCSC:RGD:1359178 NextBio:629368 ArrayExpress:Q5I0H4
Genevestigator:Q5I0H4 GermOnline:ENSRNOG00000003928 Uniprot:Q5I0H4
Length = 188
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 118/180 (65%), Positives = 139/180 (77%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLD 57
M+ADTLLIVFISVCTALL+EG+TW+LVYRT+KY++LK E+EKQ +EKKKE I +
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA-G 62
Query: 58 XXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
DL+MV+MKSMFAIGF FTAL+ MFN+IFDG++VAKLPFTP+
Sbjct: 63 RQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPL 122
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQP 177
S++QGLSHRNL G+D TDCSFIFLYILCTMSIRQNIQK+LG APSR A KQ GG G P
Sbjct: 123 SYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPPP 182
>WB|WBGene00009045 [details] [associations]
symbol:F22B5.10 species:6239 "Caenorhabditis elegans"
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0071688 "striated muscle myosin thick
filament assembly" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] InterPro:IPR002809 InterPro:IPR008559 Pfam:PF01956
PIRSF:PIRSF023322 GO:GO:0016020 GO:GO:0071688 EMBL:Z50044
eggNOG:NOG301636 GeneTree:ENSGT00390000002659 HOGENOM:HOG000240371
OMA:LSLVKMK PANTHER:PTHR20917 PIR:T21243 RefSeq:NP_495786.1
STRING:Q19714 PaxDb:Q19714 EnsemblMetazoa:F22B5.10.1
EnsemblMetazoa:F22B5.10.2 GeneID:174352 KEGG:cel:CELE_F22B5.10
UCSC:F22B5.10 CTD:174352 WormBase:F22B5.10 InParanoid:Q19714
NextBio:883672 Uniprot:Q19714
Length = 186
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 98/171 (57%), Positives = 125/171 (73%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLD 57
M D LLI+ I+ TAL EG+TWLLVYR++ Y++LK +++K+ +EKKK+ + T D
Sbjct: 1 MLGDCLLIIAIAFGTALAGEGITWLLVYRSDHYKRLKADMDKKTKKLEKKKQEVGDTN-D 59
Query: 58 XXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
D++M KMKSMFAIG AFTALLS FN+IF+G++VAKLPF PI
Sbjct: 60 KNIKRKLEREEERLKATNRDMSMFKMKSMFAIGLAFTALLSTFNSIFEGRVVAKLPFYPI 119
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQ 168
++QGLSHRNL GED TDCSFIFLYILCTM++RQN+QK+LGFAPSR A+Q
Sbjct: 120 GFIQGLSHRNLIGEDMTDCSFIFLYILCTMTVRQNLQKILGFAPSRAMARQ 170
>UNIPROTKB|J3KS45 [details] [associations]
symbol:TMCO1 "Transmembrane and coiled-coil
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002809
InterPro:IPR008559 Pfam:PF01956 GO:GO:0016020 EMBL:AL451074
PANTHER:PTHR20917 HGNC:HGNC:18188 Ensembl:ENST00000481278
Uniprot:J3KS45
Length = 143
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 84/142 (59%), Positives = 103/142 (72%)
Query: 12 SVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAIESTLLDXXXXXXXXXXX 68
S+ L G+TW+LVYRT+KY++LK E+EKQ +EKKKE I +
Sbjct: 3 SIAEFSLVSGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA-GRQQKKKIERQE 61
Query: 69 XXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPISWVQGLSHRNL 128
DL+MV+MKSMFAIGF FTAL+ MFN+IFDG++VAKLPFTP+S++QGLSHRNL
Sbjct: 62 EKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLSYIQGLSHRNL 121
Query: 129 SGEDYTDCSFIFLYILCTMSIR 150
G+D TDCSFIFLYILCTMSIR
Sbjct: 122 LGDDTTDCSFIFLYILCTMSIR 143
>UNIPROTKB|J3QQY2 [details] [associations]
symbol:TMCO1 "Transmembrane and coiled-coil
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002809
InterPro:IPR008559 Pfam:PF01956 GO:GO:0016021 EMBL:CH471067
EMBL:AL451074 PANTHER:PTHR20917 UniGene:Hs.31498 HGNC:HGNC:18188
Ensembl:ENST00000464650 Ensembl:ENST00000580248 Uniprot:J3QQY2
Length = 104
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 76/98 (77%), Positives = 86/98 (87%)
Query: 80 MVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPISWVQGLSHRNLSGEDYTDCSFI 139
MV+MKSMFAIGF FTAL+ MFN+IFDG++VAKLPFTP+S++QGLSHRNL G+D TDCSFI
Sbjct: 1 MVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLSYIQGLSHRNLLGDDTTDCSFI 60
Query: 140 FLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQP 177
FLYILCTMSIRQNIQK+LG APSR A KQ GG G P
Sbjct: 61 FLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGPPP 98
>TAIR|locus:2088634 [details] [associations]
symbol:AT3G12030 "AT3G12030" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR002809
InterPro:IPR008559 Pfam:PF01956 PIRSF:PIRSF023322 GO:GO:0005794
EMBL:CP002686 GO:GO:0016020 EMBL:AP002040 EMBL:AC069473
PANTHER:PTHR20917 ProtClustDB:CLSN2686887 EMBL:BT005514
EMBL:AK118289 IPI:IPI00522182 RefSeq:NP_566409.1 UniGene:At.64995
PRIDE:Q9LHL8 EnsemblPlants:AT3G12030.1 GeneID:820377
KEGG:ath:AT3G12030 TAIR:At3g12030 InParanoid:Q9LHL8 OMA:PTDCSMA
PhylomeDB:Q9LHL8 ArrayExpress:Q9LHL8 Genevestigator:Q9LHL8
Uniprot:Q9LHL8
Length = 196
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 77/183 (42%), Positives = 108/183 (59%)
Query: 2 WADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQMEK----KKEAIESTL-L 56
+AD+L +V IS CTAL+ E ++W+L+YRT Y+ LK I+K +K K E S L +
Sbjct: 13 YADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKYSIDKATKKLETMKTENPSSKLSI 72
Query: 57 DXXXXXXXXXXXXXXXXXXXDLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTP 116
DL++ K KS + + + N++F+GK+VAKLPF P
Sbjct: 73 KKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFHP 132
Query: 117 ISWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQ 176
I+ V+ +SHR L G+D TDCS FLY+LC++SIR N+QK LGF+P R AA GG+F
Sbjct: 133 ITIVKKMSHRGLKGDDPTDCSMAFLYLLCSISIRTNLQKFLGFSPPRGAAG-AGGLF-PM 190
Query: 177 PKP 179
P P
Sbjct: 191 PDP 193
>TAIR|locus:2144173 [details] [associations]
symbol:AT5G06660 "AT5G06660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR002809 InterPro:IPR008559 Pfam:PF01956
PIRSF:PIRSF023322 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016020 EMBL:AP002543 OMA:LSLVKMK PANTHER:PTHR20917
EMBL:AY039847 EMBL:AY060536 IPI:IPI00517086 RefSeq:NP_196284.1
UniGene:At.25423 PRIDE:Q9FG04 EnsemblPlants:AT5G06660.1
GeneID:830554 KEGG:ath:AT5G06660 TAIR:At5g06660 InParanoid:Q9FG04
PhylomeDB:Q9FG04 ProtClustDB:CLSN2686887 Genevestigator:Q9FG04
Uniprot:Q9FG04
Length = 196
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 76/183 (41%), Positives = 109/183 (59%)
Query: 2 WADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQMEK----KKEAIESTLLD 57
+AD+L +V IS CTAL+ E ++W+L+YRT Y+ LK+ I+K +K K + S L +
Sbjct: 13 YADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLETMKTDNPSSKLTN 72
Query: 58 XXXXXXXXXXXXXXXXXXX-DLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTP 116
DL++ K KS + + + N++F+GK+VAKLPF P
Sbjct: 73 KKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFHP 132
Query: 117 ISWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRTAAKQGGGMFGTQ 176
I+ V+ +SHR L G+D TDCS FLY+LC++SIR N+QK LGF+P R AA GG+F
Sbjct: 133 ITIVRKMSHRGLKGDDSTDCSMAFLYLLCSISIRTNLQKFLGFSPPRGAAG-AGGLF-PM 190
Query: 177 PKP 179
P P
Sbjct: 191 PDP 193
>DICTYBASE|DDB_G0281489 [details] [associations]
symbol:DDB_G0281489 "transmembrane and coiled-coil
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002809 InterPro:IPR008559 Pfam:PF01956
PIRSF:PIRSF023322 dictyBase:DDB_G0281489 GO:GO:0016021
GenomeReviews:CM000152_GR EMBL:AAFI02000041 eggNOG:NOG301636
OMA:LSLVKMK PANTHER:PTHR20917 RefSeq:XP_640713.1 STRING:Q54TU8
EnsemblProtists:DDB0205621 GeneID:8623100 KEGG:ddi:DDB_G0281489
ProtClustDB:CLSZ2430552 Uniprot:Q54TU8
Length = 186
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 73/167 (43%), Positives = 106/167 (63%)
Query: 4 DTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEK---QMEK--KKEAIESTLLDX 58
+ L I+F+S+ ++L SEG++WLLVYRTE Y++ K I++ Q++K +E+ S+L
Sbjct: 5 EVLFILFVSIASSLASEGVSWLLVYRTENYKRGKANIDRLQIQLDKLVDQESETSSLSKK 64
Query: 59 XXXXXXXXXXXXXXXXXX-DLTMVKMKSMFAIGFAFTALLSMFNTIFDGKIVAKLPFTPI 117
+L+ KMKSMFA+ + AL S N IFDG +V KLPF PI
Sbjct: 65 GNKDKKIEKIEEQLKIANKELSFSKMKSMFAVAISMIALFSYLNRIFDGVVVCKLPFVPI 124
Query: 118 SWVQGLSHRNLSGEDYTDCSFIFLYILCTMSIRQNIQKMLGFAPSRT 164
++QG+SHR ++G+DYTDCS F+Y +C+M IR NIQ +LG AP +T
Sbjct: 125 GFLQGISHRTIAGDDYTDCSMTFIYAICSMFIRNNIQLILGTAPPKT 171
>UNIPROTKB|J3KTQ7 [details] [associations]
symbol:TMCO1 "Transmembrane and coiled-coil
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002809
InterPro:IPR008559 Pfam:PF01956 GO:GO:0016021 EMBL:CH471067
EMBL:AL451074 PANTHER:PTHR20917 UniGene:Hs.31498 HGNC:HGNC:18188
Ensembl:ENST00000465705 Uniprot:J3KTQ7
Length = 152
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 40/54 (74%), Positives = 49/54 (90%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQ---MEKKKEAI 51
M+ADTLLIVFISVCTALL+EG+TW+LVYRT+KY++LK E+EKQ +EKKKE I
Sbjct: 55 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETI 108
>UNIPROTKB|J3QRB3 [details] [associations]
symbol:TMCO1 "Transmembrane and coiled-coil
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002809
InterPro:IPR008559 Pfam:PF01956 GO:GO:0016020 EMBL:AL451074
PANTHER:PTHR20917 HGNC:HGNC:18188 Ensembl:ENST00000476143
Uniprot:J3QRB3
Length = 95
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 35/46 (76%), Positives = 44/46 (95%)
Query: 1 MWADTLLIVFISVCTALLSEGLTWLLVYRTEKYQKLKTEIEKQMEK 46
M+ADTLLIVFISVCTALL+EG+TW+LVYRT+KY++LK E+EKQ +K
Sbjct: 50 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKK 95
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.136 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 179 160 0.00097 106 3 11 22 0.44 31
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 582 (62 KB)
Total size of DFA: 141 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.78u 0.08s 15.86t Elapsed: 00:00:02
Total cpu time: 15.79u 0.08s 15.87t Elapsed: 00:00:02
Start: Thu Aug 15 14:49:27 2013 End: Thu Aug 15 14:49:29 2013