Query psy10294
Match_columns 226
No_of_seqs 258 out of 1582
Neff 9.2
Searched_HMMs 46136
Date Fri Aug 16 22:46:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10294.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10294hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569|consensus 99.8 1.2E-18 2.6E-23 152.1 16.4 182 3-199 280-468 (485)
2 PRK10077 xylE D-xylose transpo 99.7 4E-16 8.7E-21 137.5 16.3 179 6-199 284-471 (479)
3 KOG0254|consensus 99.7 1.4E-15 3E-20 135.8 18.1 184 2-199 304-497 (513)
4 TIGR00893 2A0114 d-galactonate 99.7 1.5E-15 3.2E-20 129.0 14.3 152 9-166 10-162 (399)
5 TIGR00903 2A0129 major facilit 99.6 1.7E-15 3.8E-20 129.8 12.3 152 8-166 6-158 (368)
6 TIGR00710 efflux_Bcr_CflA drug 99.6 4.6E-15 1E-19 126.6 13.8 153 8-166 20-173 (385)
7 TIGR02332 HpaX 4-hydroxyphenyl 99.6 1.1E-14 2.3E-19 126.7 16.1 159 11-189 26-191 (412)
8 TIGR00887 2A0109 phosphate:H+ 99.6 6.6E-15 1.4E-19 131.0 15.0 174 8-198 303-501 (502)
9 PRK03545 putative arabinose tr 99.6 5.6E-15 1.2E-19 127.2 14.0 149 12-166 28-177 (390)
10 COG2814 AraJ Arabinose efflux 99.6 7.2E-15 1.6E-19 125.2 13.8 158 11-188 31-189 (394)
11 PRK11102 bicyclomycin/multidru 99.6 9E-15 1.9E-19 124.9 13.8 153 8-166 6-159 (377)
12 PRK15403 multidrug efflux syst 99.6 9.5E-15 2.1E-19 127.1 13.8 150 11-166 34-184 (413)
13 TIGR00881 2A0104 phosphoglycer 99.6 2.3E-15 5.1E-20 127.6 9.6 152 9-166 11-164 (379)
14 TIGR00895 2A0115 benzoate tran 99.6 1.2E-14 2.6E-19 124.1 13.1 150 11-166 35-185 (398)
15 PRK10213 nepI ribonucleoside t 99.6 1.9E-14 4.2E-19 124.4 14.2 148 13-166 40-188 (394)
16 PRK11663 regulatory protein Uh 99.6 1.3E-14 2.8E-19 126.9 12.9 149 11-166 41-191 (434)
17 TIGR00879 SP MFS transporter, 99.6 5E-14 1.1E-18 122.8 15.7 168 8-189 299-472 (481)
18 PRK10473 multidrug efflux syst 99.6 1.3E-14 2.9E-19 124.8 11.9 154 7-166 17-171 (392)
19 TIGR00891 2A0112 putative sial 99.6 3.4E-14 7.3E-19 121.9 14.2 149 11-165 30-181 (405)
20 TIGR01299 synapt_SV2 synaptic 99.6 2.3E-14 4.9E-19 132.1 13.6 148 12-165 186-347 (742)
21 PRK14995 methyl viologen resis 99.6 2.2E-14 4.8E-19 127.5 12.1 150 11-166 24-175 (495)
22 PRK10091 MFS transport protein 99.6 4.5E-14 9.7E-19 121.4 13.5 150 11-166 21-171 (382)
23 TIGR00711 efflux_EmrB drug res 99.6 1.8E-14 3.9E-19 127.0 11.1 151 10-166 19-170 (485)
24 TIGR00900 2A0121 H+ Antiporter 99.6 7.6E-14 1.6E-18 117.8 13.9 154 11-165 17-171 (365)
25 PRK11551 putative 3-hydroxyphe 99.6 4.5E-14 9.8E-19 121.9 12.4 150 11-166 33-183 (406)
26 PRK15402 multidrug efflux syst 99.6 1.1E-13 2.3E-18 119.8 14.5 151 10-166 30-181 (406)
27 TIGR00898 2A0119 cation transp 99.5 7.5E-14 1.6E-18 124.1 13.1 144 14-166 110-257 (505)
28 PF07690 MFS_1: Major Facilita 99.5 2.4E-14 5.3E-19 120.4 9.5 150 11-166 14-165 (352)
29 PRK10077 xylE D-xylose transpo 99.5 1.5E-13 3.2E-18 121.2 14.5 143 24-166 51-208 (479)
30 TIGR00890 2A0111 Oxalate/Forma 99.5 5.9E-14 1.3E-18 118.9 10.7 149 10-166 20-170 (377)
31 PF00083 Sugar_tr: Sugar (and 99.5 8.9E-17 1.9E-21 140.7 -7.6 181 3-199 263-450 (451)
32 PRK11652 emrD multidrug resist 99.5 3.4E-13 7.4E-18 116.1 14.5 149 12-166 27-176 (394)
33 TIGR00887 2A0109 phosphate:H+ 99.5 5.1E-13 1.1E-17 118.9 15.6 136 29-165 58-217 (502)
34 PRK10642 proline/glycine betai 99.5 2.1E-13 4.6E-18 121.1 12.8 156 7-165 264-422 (490)
35 KOG0255|consensus 99.5 2.2E-13 4.8E-18 121.7 13.0 130 28-166 119-248 (521)
36 PRK09874 drug efflux system pr 99.5 3.8E-13 8.2E-18 116.0 13.7 152 8-166 29-186 (408)
37 PRK10054 putative transporter; 99.5 1.7E-13 3.7E-18 118.5 11.4 153 7-166 21-175 (395)
38 TIGR00886 2A0108 nitrite extru 99.5 4.6E-13 9.9E-18 113.8 13.0 152 7-164 15-179 (366)
39 PRK10504 putative transporter; 99.5 2.5E-13 5.5E-18 119.7 11.7 152 9-166 26-178 (471)
40 PRK11043 putative transporter; 99.5 7.1E-13 1.5E-17 114.4 14.1 149 12-166 25-174 (401)
41 PRK11646 multidrug resistance 99.5 4.8E-13 1E-17 115.9 12.5 153 7-166 24-178 (400)
42 cd06174 MFS The Major Facilita 99.5 1.6E-12 3.4E-17 108.9 15.0 153 8-166 14-167 (352)
43 KOG1330|consensus 99.5 5.2E-15 1.1E-19 126.7 -0.1 154 16-189 56-211 (493)
44 PRK12307 putative sialic acid 99.5 1.4E-12 3E-17 113.3 14.9 143 12-160 37-180 (426)
45 TIGR00899 2A0120 sugar efflux 99.5 5.4E-13 1.2E-17 113.6 11.7 153 8-166 12-169 (375)
46 TIGR00894 2A0114euk Na(+)-depe 99.5 5.4E-13 1.2E-17 117.5 12.1 141 22-166 70-212 (465)
47 PRK03893 putative sialic acid 99.5 9.3E-13 2E-17 116.7 13.4 144 11-160 38-182 (496)
48 PLN00028 nitrate transmembrane 99.5 1.1E-12 2.5E-17 116.1 13.8 150 10-166 53-212 (476)
49 COG2271 UhpC Sugar phosphate p 99.5 1E-13 2.2E-18 117.7 6.8 149 12-166 48-199 (448)
50 PRK09705 cynX putative cyanate 99.5 3.8E-12 8.2E-17 110.0 16.4 147 10-163 26-174 (393)
51 PRK11273 glpT sn-glycerol-3-ph 99.5 1.2E-12 2.5E-17 115.2 13.4 150 13-166 49-201 (452)
52 TIGR00879 SP MFS transporter, 99.5 7.3E-13 1.6E-17 115.5 12.0 150 13-165 48-209 (481)
53 PRK10642 proline/glycine betai 99.4 2.9E-12 6.2E-17 113.9 15.4 146 14-165 37-205 (490)
54 KOG0252|consensus 99.4 1E-13 2.2E-18 118.7 5.4 180 4-199 315-511 (538)
55 TIGR00712 glpT glycerol-3-phos 99.4 1.1E-12 2.3E-17 114.9 12.0 149 14-166 48-199 (438)
56 PRK10406 alpha-ketoglutarate t 99.4 4.2E-12 9.1E-17 111.0 15.6 150 13-166 42-212 (432)
57 PRK03699 putative transporter; 99.4 7.4E-12 1.6E-16 108.1 16.3 150 11-166 25-176 (394)
58 PRK15462 dipeptide/tripeptide 99.4 5E-12 1.1E-16 111.9 15.2 154 7-165 23-181 (493)
59 PRK09556 uhpT sugar phosphate 99.4 6.8E-13 1.5E-17 117.1 9.8 154 12-166 48-205 (467)
60 TIGR00892 2A0113 monocarboxyla 99.4 2.7E-12 5.9E-17 113.0 12.6 149 11-166 37-187 (455)
61 TIGR00880 2_A_01_02 Multidrug 99.4 4.4E-12 9.5E-17 92.4 11.7 126 35-166 6-131 (141)
62 TIGR01299 synapt_SV2 synaptic 99.4 3.7E-12 7.9E-17 117.7 13.5 129 31-166 599-727 (742)
63 PRK10207 dipeptide/tripeptide 99.4 9.2E-12 2E-16 110.7 15.4 149 7-160 28-181 (489)
64 TIGR00897 2A0118 polyol permea 99.4 4.2E-12 9.1E-17 109.9 12.9 146 11-158 31-178 (402)
65 PRK03893 putative sialic acid 99.4 3.7E-12 8E-17 112.9 11.7 146 12-161 294-441 (496)
66 TIGR00890 2A0111 Oxalate/Forma 99.4 1.3E-11 2.9E-16 104.4 14.1 149 14-166 226-375 (377)
67 TIGR00924 yjdL_sub1_fam amino 99.4 1.5E-11 3.2E-16 109.0 14.7 153 7-165 24-184 (475)
68 PRK12382 putative transporter; 99.4 1.9E-11 4.1E-16 105.3 14.8 154 11-164 33-190 (392)
69 TIGR00901 2A0125 AmpG-related 99.4 2.5E-11 5.3E-16 103.1 15.3 151 11-166 6-171 (356)
70 PRK05122 major facilitator sup 99.4 1.5E-11 3.2E-16 106.1 14.0 155 11-165 33-191 (399)
71 PRK09556 uhpT sugar phosphate 99.4 4.1E-12 8.8E-17 112.2 10.6 153 10-166 275-442 (467)
72 PRK11195 lysophospholipid tran 99.4 8.1E-12 1.7E-16 108.0 11.9 139 13-161 23-162 (393)
73 TIGR00885 fucP L-fucose:H+ sym 99.4 2.6E-11 5.6E-16 105.5 15.0 151 12-166 22-200 (410)
74 PRK10489 enterobactin exporter 99.3 1.5E-11 3.2E-16 106.9 12.8 150 11-166 241-392 (417)
75 TIGR00896 CynX cyanate transpo 99.3 8.2E-11 1.8E-15 99.9 17.2 150 8-165 15-167 (355)
76 PRK10489 enterobactin exporter 99.3 7.8E-12 1.7E-16 108.6 11.0 156 10-166 34-190 (417)
77 KOG0569|consensus 99.3 6E-12 1.3E-16 110.4 9.9 132 32-166 65-198 (485)
78 cd06174 MFS The Major Facilita 99.3 3.1E-11 6.8E-16 101.0 13.8 154 7-166 189-345 (352)
79 PRK09952 shikimate transporter 99.3 3.9E-11 8.4E-16 105.2 14.8 125 35-165 72-212 (438)
80 PRK12307 putative sialic acid 99.3 4E-11 8.6E-16 104.2 14.2 138 12-153 250-388 (426)
81 KOG0253|consensus 99.3 1.6E-11 3.4E-16 103.0 10.5 129 30-166 384-512 (528)
82 PRK15075 citrate-proton sympor 99.3 8.1E-11 1.8E-15 102.9 15.4 145 11-160 33-199 (434)
83 PRK15075 citrate-proton sympor 99.3 2.8E-11 6.1E-16 105.8 11.6 143 7-152 252-398 (434)
84 PRK09584 tppB putative tripept 99.3 1.5E-10 3.4E-15 103.2 16.0 153 7-164 35-192 (500)
85 TIGR00889 2A0110 nucleoside tr 99.3 6.4E-11 1.4E-15 103.3 13.3 149 14-166 229-395 (418)
86 KOG2532|consensus 99.3 3.1E-11 6.7E-16 106.3 11.3 139 22-166 67-209 (466)
87 PRK15034 nitrate/nitrite trans 99.3 1.1E-10 2.4E-15 102.5 14.0 152 13-166 54-225 (462)
88 PRK11663 regulatory protein Uh 99.3 3.9E-11 8.4E-16 105.0 11.2 152 11-166 261-417 (434)
89 PRK11902 ampG muropeptide tran 99.3 1.3E-10 2.8E-15 100.6 14.1 151 11-166 17-175 (402)
90 PTZ00207 hypothetical protein; 99.3 1.2E-10 2.7E-15 104.9 14.3 155 9-166 43-198 (591)
91 PRK05122 major facilitator sup 99.3 8.5E-11 1.8E-15 101.3 12.7 149 11-166 234-382 (399)
92 PRK11128 putative 3-phenylprop 99.3 6.8E-11 1.5E-15 101.6 11.9 153 6-165 17-171 (382)
93 PRK09705 cynX putative cyanate 99.2 1.8E-10 3.9E-15 99.6 14.2 152 8-166 220-374 (393)
94 PRK11551 putative 3-hydroxyphe 99.2 1.1E-10 2.4E-15 100.7 12.8 136 10-151 237-373 (406)
95 TIGR00891 2A0112 putative sial 99.2 2.8E-10 6.1E-15 97.5 15.0 138 13-155 258-398 (405)
96 TIGR00806 rfc RFC reduced fola 99.2 1.6E-10 3.4E-15 100.9 12.9 135 13-155 46-182 (511)
97 PRK12382 putative transporter; 99.2 1.7E-10 3.7E-15 99.3 13.3 150 10-166 233-382 (392)
98 PRK10406 alpha-ketoglutarate t 99.2 1.3E-10 2.9E-15 101.5 12.7 154 8-164 258-415 (432)
99 PRK03633 putative MFS family t 99.2 2.4E-10 5.1E-15 98.2 13.8 136 8-149 21-157 (381)
100 KOG0254|consensus 99.2 1.3E-10 2.8E-15 104.0 12.3 130 30-166 92-223 (513)
101 PRK15011 sugar efflux transpor 99.2 2.5E-10 5.5E-15 98.5 13.6 149 11-166 33-187 (393)
102 PRK11273 glpT sn-glycerol-3-ph 99.2 2.3E-10 5.1E-15 100.6 13.6 153 10-166 270-428 (452)
103 PRK09952 shikimate transporter 99.2 5.1E-10 1.1E-14 98.1 15.6 157 8-166 265-426 (438)
104 TIGR00897 2A0118 polyol permea 99.2 5.1E-10 1.1E-14 96.9 15.4 157 7-166 236-394 (402)
105 TIGR00712 glpT glycerol-3-phos 99.2 4.4E-11 9.6E-16 104.7 8.7 156 10-166 268-426 (438)
106 TIGR00898 2A0119 cation transp 99.2 1.5E-10 3.3E-15 102.9 12.1 131 29-166 357-488 (505)
107 TIGR00883 2A0106 metabolite-pr 99.2 2.1E-10 4.4E-15 97.7 12.4 152 10-165 10-183 (394)
108 TIGR00883 2A0106 metabolite-pr 99.2 2.1E-10 4.5E-15 97.7 12.2 151 9-161 235-389 (394)
109 TIGR00902 2A0127 phenyl propri 99.2 1.6E-10 3.5E-15 99.4 11.6 147 8-161 19-167 (382)
110 PRK10133 L-fucose transporter; 99.2 6.7E-10 1.5E-14 97.5 15.4 131 11-145 44-176 (438)
111 PRK15011 sugar efflux transpor 99.2 4.6E-10 1E-14 96.9 13.9 147 13-166 236-384 (393)
112 PF06609 TRI12: Fungal trichot 99.2 1.5E-10 3.3E-15 104.0 11.1 145 15-166 66-210 (599)
113 PRK09528 lacY galactoside perm 99.2 1.9E-10 4E-15 100.1 11.0 132 29-166 264-396 (420)
114 TIGR00893 2A0114 d-galactonate 99.2 3.6E-10 7.8E-15 95.9 12.5 156 9-166 231-392 (399)
115 COG2223 NarK Nitrate/nitrite t 99.2 1.1E-10 2.5E-15 99.3 9.1 147 13-166 34-186 (417)
116 TIGR02332 HpaX 4-hydroxyphenyl 99.2 2.2E-10 4.8E-15 99.7 11.2 149 7-161 256-409 (412)
117 TIGR00892 2A0113 monocarboxyla 99.2 9.5E-11 2.1E-15 103.3 8.8 151 10-166 258-414 (455)
118 KOG2615|consensus 99.2 1E-10 2.2E-15 98.4 8.1 111 30-147 71-181 (451)
119 PF00083 Sugar_tr: Sugar (and 99.2 2.1E-13 4.6E-18 119.4 -8.7 132 30-165 49-184 (451)
120 PRK11010 ampG muropeptide tran 99.1 4.3E-10 9.2E-15 100.1 11.9 151 11-166 30-188 (491)
121 KOG2504|consensus 99.1 4.6E-10 9.9E-15 100.0 11.0 149 11-166 64-214 (509)
122 TIGR00899 2A0120 sugar efflux 99.1 2.3E-09 4.9E-14 91.3 14.9 147 13-166 219-367 (375)
123 PRK03545 putative arabinose tr 99.1 8.9E-10 1.9E-14 94.9 12.5 147 13-166 225-373 (390)
124 PRK08633 2-acyl-glycerophospho 99.1 1.5E-09 3.3E-14 105.3 14.2 128 18-148 35-165 (1146)
125 KOG2533|consensus 99.1 3.1E-09 6.7E-14 94.2 14.9 141 28-189 82-229 (495)
126 PRK09528 lacY galactoside perm 99.1 5.7E-10 1.2E-14 97.1 10.0 155 9-166 26-184 (420)
127 TIGR02718 sider_RhtX_FptX side 99.1 1.7E-09 3.7E-14 93.2 12.7 158 7-166 15-177 (390)
128 TIGR01301 GPH_sucrose GPH fami 99.1 3.1E-09 6.7E-14 93.9 14.1 164 11-189 22-220 (477)
129 KOG3764|consensus 99.1 3.4E-10 7.3E-15 95.8 7.5 133 28-166 107-240 (464)
130 TIGR00805 oat sodium-independe 99.1 2.6E-10 5.7E-15 104.3 7.4 136 13-148 53-234 (633)
131 PRK03633 putative MFS family t 99.1 1.1E-08 2.5E-13 87.8 16.9 145 13-166 220-365 (381)
132 PRK03699 putative transporter; 99.1 3.5E-09 7.5E-14 91.4 13.6 150 10-166 222-373 (394)
133 TIGR00881 2A0104 phosphoglycer 99.0 1.6E-09 3.4E-14 91.8 10.7 142 10-154 233-378 (379)
134 TIGR00882 2A0105 oligosacchari 99.0 6.7E-10 1.4E-14 95.9 8.1 156 7-166 16-176 (396)
135 COG2271 UhpC Sugar phosphate p 99.0 4.9E-10 1.1E-14 95.6 6.4 154 10-166 269-427 (448)
136 TIGR00792 gph sugar (Glycoside 99.0 4.2E-09 9.1E-14 91.7 12.4 154 11-166 17-187 (437)
137 PRK06814 acylglycerophosphoeth 99.0 4E-09 8.6E-14 102.6 12.4 125 30-158 55-180 (1140)
138 PRK09874 drug efflux system pr 99.0 3.1E-09 6.7E-14 91.6 10.5 128 33-166 264-391 (408)
139 TIGR00900 2A0121 H+ Antiporter 99.0 1.7E-08 3.7E-13 85.1 14.7 132 14-150 232-365 (365)
140 TIGR00792 gph sugar (Glycoside 99.0 4.2E-09 9.1E-14 91.7 11.2 119 28-151 258-383 (437)
141 TIGR00903 2A0129 major facilit 99.0 7.3E-09 1.6E-13 89.0 12.2 151 5-166 204-358 (368)
142 PLN00028 nitrate transmembrane 99.0 2.7E-09 5.8E-14 94.6 9.2 147 12-166 271-426 (476)
143 TIGR00895 2A0115 benzoate tran 99.0 9.4E-09 2E-13 87.7 12.1 130 10-145 267-397 (398)
144 PRK10504 putative transporter; 98.9 1.1E-08 2.4E-13 90.2 11.5 137 12-151 280-418 (471)
145 PF11700 ATG22: Vacuole efflux 98.9 2.3E-08 5E-13 88.6 13.3 157 9-166 297-461 (477)
146 PRK11010 ampG muropeptide tran 98.9 1.1E-07 2.3E-12 84.8 16.9 150 15-166 244-396 (491)
147 KOG0253|consensus 98.9 6.9E-09 1.5E-13 87.4 8.6 137 21-165 106-243 (528)
148 TIGR00902 2A0127 phenyl propri 98.9 8.6E-08 1.9E-12 82.5 15.4 150 9-166 221-372 (382)
149 TIGR02718 sider_RhtX_FptX side 98.9 1.1E-07 2.3E-12 81.9 15.9 154 12-166 227-384 (390)
150 PRK15034 nitrate/nitrite trans 98.8 8.5E-08 1.8E-12 84.4 13.5 161 4-166 263-447 (462)
151 TIGR00894 2A0114euk Na(+)-depe 98.8 3.6E-08 7.8E-13 86.9 11.1 158 5-166 273-443 (465)
152 PF05977 MFS_3: Transmembrane 98.8 8.1E-08 1.8E-12 86.1 13.2 137 28-165 46-182 (524)
153 TIGR00711 efflux_EmrB drug res 98.8 1.1E-07 2.4E-12 83.8 13.8 137 10-148 272-410 (485)
154 PF06813 Nodulin-like: Nodulin 98.8 9.4E-08 2E-12 77.5 12.1 139 7-148 16-157 (250)
155 COG2814 AraJ Arabinose efflux 98.8 6.5E-07 1.4E-11 76.8 16.7 152 6-166 224-379 (394)
156 TIGR00896 CynX cyanate transpo 98.8 2.2E-07 4.7E-12 79.0 13.8 134 10-150 214-350 (355)
157 COG2270 Permeases of the major 98.8 1.7E-07 3.6E-12 80.3 12.7 151 10-166 269-422 (438)
158 PRK10091 MFS transport protein 98.8 4.4E-07 9.5E-12 78.0 15.5 147 14-166 220-369 (382)
159 KOG0252|consensus 98.8 3.7E-08 8E-13 85.0 8.6 100 28-128 85-186 (538)
160 TIGR00882 2A0105 oligosacchari 98.8 2.3E-07 5E-12 80.1 13.6 131 30-166 257-388 (396)
161 PRK09669 putative symporter Ya 98.7 9.2E-08 2E-12 84.0 10.6 154 11-166 27-197 (444)
162 PF05977 MFS_3: Transmembrane 98.7 2.6E-07 5.7E-12 82.8 13.0 147 14-166 239-387 (524)
163 PRK10429 melibiose:sodium symp 98.7 2.1E-07 4.5E-12 82.5 11.9 120 31-151 270-396 (473)
164 TIGR00710 efflux_Bcr_CflA drug 98.7 6.5E-07 1.4E-11 76.3 14.3 134 11-147 224-360 (385)
165 PRK09848 glucuronide transport 98.7 1.4E-07 3.1E-12 82.8 10.4 133 15-151 250-391 (448)
166 COG2223 NarK Nitrate/nitrite t 98.7 1.6E-07 3.5E-12 80.2 10.3 159 6-166 231-394 (417)
167 COG0738 FucP Fucose permease [ 98.7 7.8E-07 1.7E-11 75.9 13.6 150 13-166 33-203 (422)
168 PRK14995 methyl viologen resis 98.7 3.9E-07 8.5E-12 81.2 12.5 136 10-148 276-413 (495)
169 PRK11128 putative 3-phenylprop 98.6 1.6E-06 3.4E-11 74.6 15.5 147 12-166 224-372 (382)
170 PRK11902 ampG muropeptide tran 98.6 8.5E-07 1.8E-11 76.8 13.7 145 17-166 234-383 (402)
171 TIGR01272 gluP glucose/galacto 98.6 1.6E-06 3.6E-11 72.7 14.8 140 11-159 158-301 (310)
172 PF13347 MFS_2: MFS/sugar tran 98.6 1.1E-07 2.4E-12 83.0 7.8 162 13-189 21-200 (428)
173 PRK15402 multidrug efflux syst 98.6 6.5E-07 1.4E-11 77.5 12.0 138 14-153 236-375 (406)
174 TIGR00901 2A0125 AmpG-related 98.6 4.2E-07 9E-12 77.2 9.8 121 10-131 226-354 (356)
175 PRK08633 2-acyl-glycerophospho 98.6 5.2E-07 1.1E-11 87.8 11.5 129 12-146 251-382 (1146)
176 PRK11462 putative transporter; 98.6 1.3E-06 2.9E-11 77.2 13.0 154 11-166 27-197 (460)
177 COG3104 PTR2 Dipeptide/tripept 98.6 4.6E-07 1E-11 79.2 9.8 155 8-166 36-199 (498)
178 PF03825 Nuc_H_symport: Nucleo 98.6 3E-06 6.6E-11 73.6 14.9 137 12-154 226-370 (400)
179 PRK10473 multidrug efflux syst 98.5 9E-07 2E-11 76.2 10.8 134 14-158 224-359 (392)
180 PRK10429 melibiose:sodium symp 98.5 1E-06 2.3E-11 78.0 11.3 154 10-166 23-194 (473)
181 TIGR00788 fbt folate/biopterin 98.5 9.8E-07 2.1E-11 78.2 10.6 144 16-166 49-202 (468)
182 PRK11043 putative transporter; 98.5 4.8E-06 1E-10 71.9 14.5 136 11-148 221-357 (401)
183 PRK11462 putative transporter; 98.5 2.4E-06 5.3E-11 75.5 12.7 117 31-151 267-390 (460)
184 PRK10213 nepI ribonucleoside t 98.5 6E-06 1.3E-10 71.5 14.9 146 13-165 236-383 (394)
185 PF07690 MFS_1: Major Facilita 98.5 1.3E-06 2.8E-11 73.3 9.9 127 10-139 223-352 (352)
186 COG2211 MelB Na+/melibiose sym 98.4 1E-05 2.2E-10 71.0 14.9 118 29-151 274-399 (467)
187 COG2807 CynX Cyanate permease 98.4 4.9E-06 1.1E-10 70.2 12.3 155 5-166 220-378 (395)
188 PF05631 DUF791: Protein of un 98.4 1.6E-05 3.4E-10 67.2 15.4 145 14-166 55-209 (354)
189 KOG2504|consensus 98.4 2.7E-07 5.8E-12 82.5 5.0 154 7-166 312-469 (509)
190 TIGR00889 2A0110 nucleoside tr 98.4 1.8E-06 4E-11 75.3 10.2 61 9-69 18-81 (418)
191 PRK10133 L-fucose transporter; 98.4 4.7E-06 1E-10 73.2 12.7 141 13-162 278-422 (438)
192 PRK10054 putative transporter; 98.4 3.3E-06 7.2E-11 73.1 11.7 128 32-165 249-376 (395)
193 KOG0255|consensus 98.4 9.1E-06 2E-10 72.8 14.6 116 29-147 352-467 (521)
194 PRK09669 putative symporter Ya 98.4 5.8E-06 1.3E-10 72.6 13.0 116 32-151 269-391 (444)
195 PRK11102 bicyclomycin/multidru 98.4 3.8E-06 8.1E-11 71.7 11.1 126 13-141 214-342 (377)
196 KOG4686|consensus 98.4 1.4E-06 3E-11 71.5 7.8 127 16-150 287-416 (459)
197 KOG2816|consensus 98.4 2.1E-06 4.5E-11 75.8 9.2 131 36-189 71-201 (463)
198 KOG2532|consensus 98.4 2.5E-06 5.5E-11 75.4 9.8 158 3-166 268-440 (466)
199 PRK06814 acylglycerophosphoeth 98.4 5.4E-06 1.2E-10 80.9 13.0 148 11-159 243-408 (1140)
200 PRK11646 multidrug resistance 98.4 1.6E-05 3.5E-10 69.0 14.4 130 14-149 229-360 (400)
201 PF13347 MFS_2: MFS/sugar tran 98.3 6.7E-06 1.5E-10 71.9 11.9 140 8-151 240-387 (428)
202 TIGR00886 2A0108 nitrite extru 98.2 2.9E-06 6.2E-11 72.0 7.2 122 10-134 242-365 (366)
203 PRK11195 lysophospholipid tran 98.2 6.3E-05 1.4E-09 65.1 15.4 143 15-165 227-372 (393)
204 PF01306 LacY_symp: LacY proto 98.2 5E-06 1.1E-10 72.0 7.6 130 31-166 263-393 (412)
205 TIGR00885 fucP L-fucose:H+ sym 98.2 7.4E-05 1.6E-09 65.1 15.0 136 13-157 252-396 (410)
206 COG2807 CynX Cyanate permease 98.2 0.00011 2.4E-09 62.2 14.9 150 9-166 28-179 (395)
207 TIGR00788 fbt folate/biopterin 98.2 1.4E-05 2.9E-10 71.0 9.6 128 22-150 282-415 (468)
208 KOG2325|consensus 98.1 4.4E-05 9.6E-10 67.3 11.2 114 29-145 73-188 (488)
209 PRK09848 glucuronide transport 98.1 7.5E-05 1.6E-09 65.6 12.6 58 12-69 27-91 (448)
210 TIGR00926 2A1704 Peptide:H+ sy 98.1 0.0003 6.4E-09 64.9 16.5 157 9-166 3-175 (654)
211 COG2211 MelB Na+/melibiose sym 98.0 5.3E-05 1.2E-09 66.6 10.4 164 10-189 29-209 (467)
212 PF12832 MFS_1_like: MFS_1 lik 98.0 1E-05 2.2E-10 53.6 4.5 62 5-66 12-74 (77)
213 KOG2533|consensus 97.9 9.1E-06 2E-10 72.3 3.9 145 5-156 285-439 (495)
214 COG0477 ProP Permeases of the 97.9 0.0013 2.7E-08 52.9 16.3 145 14-162 23-174 (338)
215 PRK11652 emrD multidrug resist 97.9 0.00023 4.9E-09 61.3 12.4 131 14-148 228-360 (394)
216 PF01306 LacY_symp: LacY proto 97.9 9.1E-06 2E-10 70.4 3.6 150 9-163 23-178 (412)
217 PF03825 Nuc_H_symport: Nucleo 97.9 4.8E-05 1E-09 66.2 7.5 65 5-69 14-80 (400)
218 KOG3762|consensus 97.8 3.1E-05 6.7E-10 68.5 5.5 130 30-166 409-540 (618)
219 KOG2563|consensus 97.8 0.00015 3.4E-09 62.9 8.9 120 28-147 80-201 (480)
220 PF11700 ATG22: Vacuole efflux 97.8 0.001 2.3E-08 59.2 14.3 141 31-189 74-249 (477)
221 PRK10207 dipeptide/tripeptide 97.5 0.00053 1.2E-08 61.2 9.0 115 29-144 311-437 (489)
222 PF06609 TRI12: Fungal trichot 97.5 0.0011 2.4E-08 60.2 10.9 132 10-145 327-464 (599)
223 PF03209 PUCC: PUCC protein; 97.5 0.0079 1.7E-07 51.9 14.9 111 41-151 28-154 (403)
224 COG0738 FucP Fucose permease [ 97.4 0.0025 5.5E-08 54.8 11.7 142 12-162 255-398 (422)
225 PF05978 UNC-93: Ion channel r 97.4 0.0076 1.6E-07 45.4 13.1 107 30-143 40-146 (156)
226 PF03092 BT1: BT1 family; Int 97.4 0.0024 5.2E-08 56.2 11.0 147 16-166 13-168 (433)
227 PRK09584 tppB putative tripept 97.3 0.0017 3.7E-08 58.2 9.9 115 29-143 318-439 (500)
228 TIGR01301 GPH_sucrose GPH fami 97.3 0.004 8.7E-08 55.4 12.0 135 31-166 309-464 (477)
229 TIGR00924 yjdL_sub1_fam amino 97.3 0.012 2.5E-07 52.5 14.8 138 29-166 314-461 (475)
230 KOG2563|consensus 97.2 0.0004 8.7E-09 60.4 4.2 142 23-166 296-443 (480)
231 PF06779 DUF1228: Protein of u 97.2 0.0025 5.5E-08 42.8 7.0 66 11-76 10-76 (85)
232 PTZ00207 hypothetical protein; 97.0 0.014 3E-07 53.3 12.6 149 11-166 371-545 (591)
233 PRK15403 multidrug efflux syst 97.0 0.014 2.9E-07 50.9 12.0 151 11-165 236-389 (413)
234 COG2270 Permeases of the major 96.9 0.022 4.7E-07 49.5 12.2 153 11-166 33-213 (438)
235 KOG1330|consensus 96.5 0.032 6.9E-07 49.0 10.3 140 12-152 263-417 (493)
236 TIGR01272 gluP glucose/galacto 96.3 0.014 3E-07 48.9 6.8 62 104-165 28-105 (310)
237 PF03209 PUCC: PUCC protein; 96.3 0.24 5.2E-06 43.0 14.2 123 23-148 239-363 (403)
238 PRK15462 dipeptide/tripeptide 96.0 0.4 8.6E-06 43.1 14.7 122 24-145 305-437 (493)
239 TIGR00769 AAA ADP/ATP carrier 95.9 0.59 1.3E-05 41.7 15.2 114 31-146 47-189 (472)
240 PF06963 FPN1: Ferroportin1 (F 95.6 0.65 1.4E-05 41.0 14.5 127 15-141 280-411 (432)
241 KOG3762|consensus 95.5 0.022 4.8E-07 50.9 4.9 65 5-69 23-88 (618)
242 PF01770 Folate_carrier: Reduc 95.5 0.49 1.1E-05 41.4 12.9 128 13-147 23-154 (412)
243 KOG3764|consensus 95.5 0.026 5.5E-07 48.8 5.0 140 21-166 299-447 (464)
244 PF03137 OATP: Organic Anion T 95.4 0.004 8.7E-08 56.3 0.0 133 13-145 23-200 (539)
245 PF03092 BT1: BT1 family; Int 95.2 0.11 2.5E-06 45.7 8.3 118 32-150 260-382 (433)
246 PF00854 PTR2: POT family; In 95.0 0.24 5.1E-06 42.5 9.6 64 103-166 50-116 (372)
247 KOG2816|consensus 93.9 1.3 2.9E-05 39.4 12.1 118 23-147 272-391 (463)
248 COG3104 PTR2 Dipeptide/tripept 93.2 0.77 1.7E-05 40.9 9.1 133 11-143 306-451 (498)
249 KOG2615|consensus 93.0 0.38 8.3E-06 41.6 6.8 122 21-148 290-414 (451)
250 PF03219 TLC: TLC ATP/ADP tran 93.0 0.48 1E-05 42.5 7.8 108 39-147 71-205 (491)
251 KOG0637|consensus 92.4 0.096 2.1E-06 46.1 2.5 130 13-143 52-200 (498)
252 PF06963 FPN1: Ferroportin1 (F 92.4 7.4 0.00016 34.4 15.3 137 30-166 41-193 (432)
253 KOG3098|consensus 91.8 2.8 6.1E-05 37.3 10.9 104 31-141 54-157 (461)
254 KOG4686|consensus 91.8 0.009 2E-07 49.6 -4.2 110 31-150 83-200 (459)
255 PF13000 Acatn: Acetyl-coenzym 91.3 1.9 4.1E-05 38.7 9.2 17 48-64 61-77 (544)
256 KOG3626|consensus 91.0 0.57 1.2E-05 43.8 6.0 151 16-166 120-336 (735)
257 TIGR00805 oat sodium-independe 89.8 0.42 9E-06 44.3 4.1 63 7-69 344-411 (633)
258 KOG4332|consensus 89.8 0.37 8.1E-06 39.9 3.3 49 19-67 63-112 (454)
259 PF02487 CLN3: CLN3 protein; 88.7 1.9 4E-05 37.7 7.1 116 38-165 70-187 (402)
260 PF03137 OATP: Organic Anion T 88.3 0.14 3.1E-06 46.4 0.0 143 5-148 317-514 (539)
261 KOG1237|consensus 88.2 21 0.00046 32.8 14.1 149 18-166 63-238 (571)
262 KOG3098|consensus 88.1 19 0.00041 32.2 15.4 112 31-143 283-409 (461)
263 KOG3574|consensus 85.9 3.6 7.9E-05 35.9 7.1 44 15-62 52-103 (510)
264 PRK03612 spermidine synthase; 83.4 28 0.0006 31.6 12.0 42 121-162 144-186 (521)
265 PF02487 CLN3: CLN3 protein; 82.1 23 0.00051 31.0 10.6 41 107-147 356-396 (402)
266 KOG1479|consensus 73.6 41 0.00089 29.5 9.6 40 10-49 35-74 (406)
267 PF11947 DUF3464: Protein of u 72.3 14 0.0003 27.7 5.6 38 97-134 105-142 (153)
268 TIGR00939 2a57 Equilibrative N 71.9 45 0.00098 29.5 9.7 27 40-66 58-84 (437)
269 COG3202 ATP/ADP translocase [E 65.0 94 0.002 28.1 10.1 108 39-147 74-209 (509)
270 TIGR00880 2_A_01_02 Multidrug 55.2 63 0.0014 22.0 6.4 24 36-59 96-119 (141)
271 TIGR00939 2a57 Equilibrative N 50.7 1.8E+02 0.0039 25.8 12.0 55 86-141 373-427 (437)
272 KOG1479|consensus 47.2 1.8E+02 0.0039 25.6 8.8 102 36-140 292-397 (406)
273 KOG3626|consensus 36.2 40 0.00087 32.0 3.4 65 5-69 404-473 (735)
274 COG4769 Predicted membrane pro 35.1 1.4E+02 0.003 22.8 5.4 26 37-62 83-108 (181)
275 KOG2325|consensus 28.4 21 0.00045 32.2 0.2 58 107-164 409-466 (488)
276 PF04281 Tom22: Mitochondrial 27.1 2.6E+02 0.0056 20.6 5.9 23 111-133 60-82 (137)
277 COG5336 Uncharacterized protei 25.6 2.5E+02 0.0053 19.8 5.2 34 116-149 36-69 (116)
278 PF01770 Folate_carrier: Reduc 25.4 4.8E+02 0.01 23.1 8.6 54 7-60 261-318 (412)
279 TIGR00210 gltS sodium--glutama 22.4 1.1E+02 0.0024 26.9 3.5 40 13-52 141-180 (398)
280 PF03616 Glt_symporter: Sodium 21.7 1.2E+02 0.0026 26.3 3.6 38 15-52 143-180 (368)
281 TIGR00986 3a0801s05tom22 mitoc 21.5 2.8E+02 0.006 20.6 4.9 23 111-133 58-80 (145)
282 KOG3574|consensus 21.2 2.1E+02 0.0045 25.5 4.8 46 108-153 391-436 (510)
283 PF12670 DUF3792: Protein of u 20.1 3.2E+02 0.0069 19.1 8.6 41 29-69 36-76 (116)
No 1
>KOG0569|consensus
Probab=99.81 E-value=1.2e-18 Score=152.10 Aligned_cols=182 Identities=19% Similarity=0.309 Sum_probs=155.2
Q ss_pred cccccccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHH-hhc
Q psy10294 3 PGFNSSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAIC-SMN 80 (226)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~-~~~ 80 (226)
.+|++|.+.+.+|...++++.|++. ++.+.+...++...+.++++.++.||+|||++++.+..++.+..+.+... ...
T Consensus 280 ~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~ 359 (485)
T KOG0569|consen 280 AQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLS 359 (485)
T ss_pred HHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999998 77899999999999999999999999999999999999998833222221 222
Q ss_pred CC---CchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHH
Q psy10294 81 LH---WPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFI 157 (226)
Q Consensus 81 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 157 (226)
+. +..+..+...+.+...++.|.+|++|.+.+|++|++.|..+.++....+++..++....++.+.+.+|- ..|++
T Consensus 360 ~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~fil 438 (485)
T KOG0569|consen 360 NSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFIL 438 (485)
T ss_pred HHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHH
Confidence 11 223344566777888889999999999999999999999999999999999999999999999999886 67888
Q ss_pred HHHHHHHhhhhhhcccccccccceeEEEEecc--CCCHHHHhhh
Q psy10294 158 YSFITGIGFAIRIRGVACGICAAINSIVCFLV--TKTYIGIDWH 199 (226)
Q Consensus 158 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~e--~~~~~~~~~~ 199 (226)
+.+.+.+.. +..++++|| +|+.+|+.++
T Consensus 439 F~i~~~~~~--------------i~~~~~lPETkgr~~~eI~~~ 468 (485)
T KOG0569|consen 439 FVIPLAIFL--------------IYLYRYLPETKGRTPYEIIEE 468 (485)
T ss_pred HHHHHHHHH--------------HHHHHhCcccCCCCHHHHHHH
Confidence 888888887 788899999 7888888776
No 2
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.71 E-value=4e-16 Score=137.48 Aligned_cols=179 Identities=22% Similarity=0.276 Sum_probs=127.2
Q ss_pred ccccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy10294 6 NSSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWP 84 (226)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (226)
..+.+...+|.|.+.++.|.+. ...+......+...++.+++++++||+|||+.++.+..+..+..+....... ....
T Consensus 284 ~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~-~~~~ 362 (479)
T PRK10077 284 FVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFY-TQAP 362 (479)
T ss_pred HhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHh-cCcc
Confidence 3445556678899999888876 4566666778888999999999999999999999988887774333322111 1112
Q ss_pred hHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH------HhhchhhHHHHH
Q psy10294 85 GWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI------TWFGLHGTLFIY 158 (226)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~ 158 (226)
.............+.+.+..+..+.+++|.+|+++|+++.|+.+..+++++.+++.+.+.+. +..+|+..++++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 442 (479)
T PRK10077 363 GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIY 442 (479)
T ss_pred cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHH
Confidence 22222333333444444455777889999999999999999999999999999887777554 467888788888
Q ss_pred HHHHHHhhhhhhcccccccccceeEEEEecc--CCCHHHHhhh
Q psy10294 159 SFITGIGFAIRIRGVACGICAAINSIVCFLV--TKTYIGIDWH 199 (226)
Q Consensus 159 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~e--~~~~~~~~~~ 199 (226)
+++..+.. +..+++.|| +++.+|.++.
T Consensus 443 ~~~~~~~~--------------~~~~~~~~e~~~~~~~~~~~~ 471 (479)
T PRK10077 443 GCMGVLAA--------------LFMWKFVPETKGKTLEEMEAL 471 (479)
T ss_pred HHHHHHHH--------------HHHHhccccCCCCCHHHHHHH
Confidence 87766665 555556788 4555555444
No 3
>KOG0254|consensus
Probab=99.69 E-value=1.4e-15 Score=135.83 Aligned_cols=184 Identities=22% Similarity=0.372 Sum_probs=149.8
Q ss_pred CcccccccceecccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHH-hhc
Q psy10294 2 GPGFNSSFVSMRPYLVEIFQTFGVPLKSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAIC-SMN 80 (226)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~-~~~ 80 (226)
.++|++|++...+|.+++++..|.+.+......+.++...++..++.++.||+|||+.++.+...+.++.+..... ...
T Consensus 304 ~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~ 383 (513)
T KOG0254|consen 304 LFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFA 383 (513)
T ss_pred HHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHh
Confidence 4789999999999999999999888643667778888889999999999999999999999999998833332221 111
Q ss_pred ------CCCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhH
Q psy10294 81 ------LHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGT 154 (226)
Q Consensus 81 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 154 (226)
.....+..+...+.+...+..+.++++|.+.+|.+|.+.|+++.++....+++.+++....++...+..+....
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~ 463 (513)
T KOG0254|consen 384 LYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGT 463 (513)
T ss_pred ccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 12335667777788888889999999999999999999999999999999999999888888887776554557
Q ss_pred HHHHHHHHHHhhhhhhcccccccccce-eEEEEecc--CCCHHHHhhh
Q psy10294 155 LFIYSFITGIGFAIRIRGVACGICAAI-NSIVCFLV--TKTYIGIDWH 199 (226)
Q Consensus 155 ~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~e--~~~~~~~~~~ 199 (226)
|..+...+.+.. . ..++++|| +++.+|+++.
T Consensus 464 f~~f~~~~~~~~--------------~~fv~~~~pETkg~sleei~~~ 497 (513)
T KOG0254|consen 464 FGYFGGICLLSL--------------IIFVFFFVPETKGLTLEEINEL 497 (513)
T ss_pred HHHHHHHHHHHH--------------HHHheEEcccCCCCcHHHHHHH
Confidence 777777777776 5 67788999 7888888775
No 4
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.67 E-value=1.5e-15 Score=129.03 Aligned_cols=152 Identities=14% Similarity=0.090 Sum_probs=118.0
Q ss_pred cceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 9 FVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
...+....|.+.+++|.+. +..+......++..++.++.|+++||+|||+.+..+..+..+....... ..+..
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~------~~~~~ 83 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAF------AGAYV 83 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHH------HcCHH
Confidence 3456677888888999987 7788888999999999999999999999999999888877774433333 12233
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.+.....+.+.......+....+++|.+|+++|+++.++......++..+++.+.+.+.+..+|++.++..+.+..+..
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 3333333333322334456667899999999999999999999999999999999998899999999988877776665
No 5
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.65 E-value=1.7e-15 Score=129.85 Aligned_cols=152 Identities=11% Similarity=0.004 Sum_probs=112.1
Q ss_pred ccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 8 SFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
+.....+.+|.+.+++|.+. +.++..+...++..++++..|+++||+|||+++............ ... ...+.
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~-----~~~~~ 79 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLL-----DPFNY 79 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHH-----HhccH
Confidence 34456778999999999998 667888889999999999999999999999876544333322221 112 11233
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
..+...+++. +.+.+.........+|.+|+++|+++.++......+|..+++.+.+.+.+++|||+.|++.+.+..+..
T Consensus 80 ~~l~~~R~l~-G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 80 EWLLACQLLA-ALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHHH-HhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 3333333333 223333334445668999999999999999999999999999999999999999999988888876665
No 6
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.63 E-value=4.6e-15 Score=126.64 Aligned_cols=153 Identities=15% Similarity=0.140 Sum_probs=116.3
Q ss_pred ccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 8 SFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
+.....+..|.+.+++|.+. +..+......++..++.++.|++.||+|||+.+..+..+..+..+.... .++.
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~------~~~~ 93 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL------SNNI 93 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH------HccH
Confidence 34455667888999999987 7788888999999999999999999999999999888777774433333 1222
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
..+.....+.+.......+....++.|.+|+++|+++.++.+....++..+++.+.+.+.++.+|+..+++.+....+..
T Consensus 94 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 173 (385)
T TIGR00710 94 ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLS 173 (385)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 22322232222222223345567889999999999999999999999999999999999999999998888777766654
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.63 E-value=1.1e-14 Score=126.71 Aligned_cols=159 Identities=13% Similarity=0.004 Sum_probs=119.4
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
.+.+..|.+.+++|.+. +.++..+...++..+++++.|++.||+|||+.+..+.++..+..+.... .++...+
T Consensus 26 ~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~------~~~~~~l 99 (412)
T TIGR02332 26 NIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMF------ATGPESL 99 (412)
T ss_pred hHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHH------hcCHHHH
Confidence 34455777788999988 6788889999999999999999999999999998888887774433333 1223333
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH------hhchhhHHHHHHHHHH
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT------WFGLHGTLFIYSFITG 163 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~ 163 (226)
.....+.+....+..+....+++|++|+++|+++.++.+....+|..+++.+.+++.+ ..|||+.|++.+...+
T Consensus 100 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l 179 (412)
T TIGR02332 100 YLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSV 179 (412)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHH
Confidence 3333333333333445556688999999999999999999999999999999887764 3699999998877776
Q ss_pred HhhhhhhcccccccccceeEEEEecc
Q psy10294 164 IGFAIRIRGVACGICAAINSIVCFLV 189 (226)
Q Consensus 164 i~~~~~~~~~~~~~~~~~~~~~~~~e 189 (226)
+.. ++..+++||
T Consensus 180 ~~~--------------~~~~~~~~~ 191 (412)
T TIGR02332 180 ILG--------------VMTWFWLDD 191 (412)
T ss_pred HHH--------------HHHhhccCC
Confidence 655 445556787
No 8
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.63 E-value=6.6e-15 Score=131.03 Aligned_cols=174 Identities=19% Similarity=0.269 Sum_probs=117.2
Q ss_pred ccceecccHHHHHhhcCCCch-HHH------------HHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHH
Q psy10294 8 SFVSMRPYLVEIFQTFGVPLK-SEW------------VLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIAL 74 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~-~~~------------~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~ 74 (226)
..+....|.|+++++.|.+.+ ... ......++.+++.+++++++||+|||+.++.+..+..++....
T Consensus 303 ~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l 382 (502)
T TIGR00887 303 AFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVL 382 (502)
T ss_pred HHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHH
Confidence 445677788999988887642 111 1233444567788999999999999999988877776633222
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh------
Q psy10294 75 AICSMNLHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW------ 148 (226)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 148 (226)
.. ... .................++.+..+..+.+.+|++|++.|+++.|+.+..+++++++++.+.+++.+.
T Consensus 383 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 460 (502)
T TIGR00887 383 GF-AYN-HLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKG 460 (502)
T ss_pred HH-HHH-hcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccc
Confidence 22 110 0111111222222223344556677888899999999999999999999999999999999988773
Q ss_pred ----hchhhHHHHHHHHHHHhhhhhhcccccccccceeEEEEecc--CCCHHHHhh
Q psy10294 149 ----FGLHGTLFIYSFITGIGFAIRIRGVACGICAAINSIVCFLV--TKTYIGIDW 198 (226)
Q Consensus 149 ----~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~e--~~~~~~~~~ 198 (226)
.++...++++++...+.. +.. +++|| +++.||+++
T Consensus 461 ~~~~~~~~~~~~i~~~~~~~~~--------------i~~-~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 461 YPTGIWMGHVLEIFALFMFLGI--------------LFT-LLIPETKGKSLEELSG 501 (502)
T ss_pred ccccccchHHHHHHHHHHHHHH--------------HHh-eEeccCCCCCHHhhhC
Confidence 344556777777776665 433 56799 666666543
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.63 E-value=5.6e-15 Score=127.23 Aligned_cols=149 Identities=14% Similarity=0.034 Sum_probs=114.7
Q ss_pred ecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 12 MRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 12 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
....+|.+.+++|.+. +.++..+...++..++++..|++.||+|||+++..+..+..+..+.... .++...+.
T Consensus 28 ~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~------~~~~~~l~ 101 (390)
T PRK03545 28 PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSAL------AWNFTVLL 101 (390)
T ss_pred HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHH------hccHHHHH
Confidence 3456788899999998 6788888888889999999999999999999999988887774333333 12233333
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
......+.......+....++.|.+|+++|+++.|+......++..+++.+.+.+.+++|||+.|++.+.+.++..
T Consensus 102 ~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~ 177 (390)
T PRK03545 102 ISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITL 177 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHH
Confidence 3333322222223355567888999999999999999999999999999999998899999999998888766654
No 10
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.63 E-value=7.2e-15 Score=125.23 Aligned_cols=158 Identities=13% Similarity=0.088 Sum_probs=135.4
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
.....+|++.+|+|++. ..++..+.+..+..+++++...+.||+.||++++....++.+..+.... .+++..+
T Consensus 31 v~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~al------Ap~f~~L 104 (394)
T COG2814 31 VPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSAL------APSFAVL 104 (394)
T ss_pred HHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH------hccHHHH
Confidence 34556899999999998 7889999999999999999999999999999999999988885544444 3556666
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhhhhh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGFAIR 169 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 169 (226)
...+...+.....+.++...+..|+.|+++|++++++......++..++.++..++-+.+|||.+|+..+.+..+..
T Consensus 105 l~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~--- 181 (394)
T COG2814 105 LLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLAL--- 181 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHH---
Confidence 66666665555566788888999999999999999999999999999999999999999999999999999988887
Q ss_pred hcccccccccceeEEEEec
Q psy10294 170 IRGVACGICAAINSIVCFL 188 (226)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~ 188 (226)
+..+..+|
T Consensus 182 -----------~~~~~~lP 189 (394)
T COG2814 182 -----------LLLWKLLP 189 (394)
T ss_pred -----------HHHHHhCC
Confidence 66666778
No 11
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.62 E-value=9e-15 Score=124.93 Aligned_cols=153 Identities=17% Similarity=0.181 Sum_probs=117.5
Q ss_pred ccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 8 SFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
+.....+.+|.+.+++|.+. +..+..+...++..++.++.|+++||+|||+.+..+..+..+....... .++.
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~------~~~~ 79 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL------AQTI 79 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH------HccH
Confidence 34456688999999999987 6778888899999999999999999999999999988887774443333 1222
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
..+.......+.......+....++.|.+|+++|+++.++.+....++..+++.+.+.+.++.+|++.+++.+.+..+..
T Consensus 80 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 159 (377)
T PRK11102 80 DQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAA 159 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 22333333323322233455567889999999999999999999999999999999999998999998888777766654
No 12
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.61 E-value=9.5e-15 Score=127.07 Aligned_cols=150 Identities=12% Similarity=0.064 Sum_probs=113.9
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
...+-+|.+.++++.+. ...+..+...++..++.++.|+++||+|||++++.+..+..+..+.... .++...+
T Consensus 34 ~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~------a~~~~~l 107 (413)
T PRK15403 34 LIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF------TTSMTQF 107 (413)
T ss_pred hhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH------cCCHHHH
Confidence 34556777888899887 6778888889999999999999999999999999988777764443333 1233333
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.....+.+.......+..+.+..|.+|+++|++++++......++..+++.+.+.+.+++|||+.|++.++...+..
T Consensus 108 ~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~ 184 (413)
T PRK15403 108 LIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAF 184 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 33333322222222345567888999999999999999999999999999999888888899999998887766665
No 13
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.61 E-value=2.3e-15 Score=127.57 Aligned_cols=152 Identities=9% Similarity=-0.022 Sum_probs=114.5
Q ss_pred cceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 9 FVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
...+....|.+.+++|.+. +..+..+...++..++.++.|+++||+|||+.+..+..+..+..+.... ..+..
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~------~~~~~ 84 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGF------STSLW 84 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHH------hhhHH
Confidence 3455667888888999988 6788888999999999999999999999999999998888774444333 12233
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHH-HHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVT-KTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.+.....+.+.......+....+++|.+|+++|+++.++......++..+++ .+...+.+..+|++.+++.+.+..+..
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (379)
T TIGR00881 85 VMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVS 164 (379)
T ss_pred HHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 3333333333322333466677899999999999999999999999999998 466666677899998888777766654
No 14
>TIGR00895 2A0115 benzoate transport.
Probab=99.60 E-value=1.2e-14 Score=124.14 Aligned_cols=150 Identities=19% Similarity=0.173 Sum_probs=113.2
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
...++.|.+.+++|.+. +..+......++..++.++.++++||+|||+.+..+..+..+..+.... ..+...+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 108 (398)
T TIGR00895 35 AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL------ATNVTQL 108 (398)
T ss_pred HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH------ccchHHH
Confidence 44567888888899887 6677788888899999999999999999999999888777764333333 1222222
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.....+.+.......+....++.|.+|+++|+++.++......++..+++.+.+.+.+..||+..+++.+.+..+..
T Consensus 109 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 185 (398)
T TIGR00895 109 LILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLL 185 (398)
T ss_pred HHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHH
Confidence 22232222222233456677899999999999999999999999999999999999998999988887765555544
No 15
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.60 E-value=1.9e-14 Score=124.37 Aligned_cols=148 Identities=14% Similarity=0.104 Sum_probs=115.1
Q ss_pred cccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 13 RPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
...+|.+.+++|.+. +..+..+...+...+++++.|.++||+|||+.++.+..+..+..+.... .++...+..
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~------~~~~~~l~~ 113 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSF------ANSFSLLLI 113 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHH------HChHHHHHH
Confidence 345788889999988 6678888889999999999999999999999999999998874433333 123333333
Q ss_pred HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 92 FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.....+.......+....+++|++|+++|+++.++......++..+++.+.+.+.+++|||+.|++.+.+..+..
T Consensus 114 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 114 GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 333333333334466677889999999999999999999999999999999999999999999988776665543
No 16
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.60 E-value=1.3e-14 Score=126.94 Aligned_cols=149 Identities=12% Similarity=0.113 Sum_probs=114.9
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
....+.|.+.+++|.+. +..+..+...++..+++++.|++.||+|||+.+.++.++..+..+.... ..+...+
T Consensus 41 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~------~~~~~~l 114 (434)
T PRK11663 41 SFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF------SSSLWAF 114 (434)
T ss_pred hHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH------HhHHHHH
Confidence 45677899999999997 6778888999999999999999999999999999888888774444333 1222222
Q ss_pred HHHH-HHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFC-ICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~-~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.... ..+.+.+.. .+....+++|++|+++|+++.++.+....++..+++.+.+.+.+.+|||+.|++.+++..+..
T Consensus 115 ~~~~~l~g~~~g~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 115 ALLWVLNAFFQGWG-WPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHcc-chHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 2222 222233322 345567889999999999999999999999999999999999999999999988777655443
No 17
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.59 E-value=5e-14 Score=122.81 Aligned_cols=168 Identities=21% Similarity=0.381 Sum_probs=126.0
Q ss_pred ccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCC---
Q psy10294 8 SFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHW--- 83 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~--- 83 (226)
+...+..+.|.+.++.|.+. +..+......+...++.++.++++||+|||+.+..+..+..+..+...........
T Consensus 299 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (481)
T TIGR00879 299 GINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSS 378 (481)
T ss_pred CCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcc
Confidence 34556778888888889887 55667778888889999999999999999999988877666633332210010011
Q ss_pred --chHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q psy10294 84 --PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFI 161 (226)
Q Consensus 84 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (226)
.....+.....+..+++.+..+..+.+.+|.+|++.|+++.++.+....+++.+++.+.+.+.++.+|+..|++.+++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~ 458 (481)
T TIGR00879 379 KSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGL 458 (481)
T ss_pred cchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHH
Confidence 133333444445555566666777778899999999999999999999999999999999999988999888888888
Q ss_pred HHHhhhhhhcccccccccceeEEEEecc
Q psy10294 162 TGIGFAIRIRGVACGICAAINSIVCFLV 189 (226)
Q Consensus 162 ~~i~~~~~~~~~~~~~~~~~~~~~~~~e 189 (226)
..+.. +...++.||
T Consensus 459 ~~~~~--------------i~~~~~~~~ 472 (481)
T TIGR00879 459 NVLGL--------------IFVYFFLPE 472 (481)
T ss_pred HHHHH--------------HHHheeccc
Confidence 77776 555566777
No 18
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.59 E-value=1.3e-14 Score=124.83 Aligned_cols=154 Identities=8% Similarity=0.032 Sum_probs=114.4
Q ss_pred cccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCch
Q psy10294 7 SSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPG 85 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (226)
.+......++|.+.+++|.+. +..+..+...++..++.++.|+++||+|||+.++.+.....+....... .++
T Consensus 17 ~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~------~~~ 90 (392)
T PRK10473 17 AGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL------AET 90 (392)
T ss_pred HHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH------hCc
Confidence 344455678999999999987 5677788888889999999999999999999999888777764333333 122
Q ss_pred HHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHh
Q psy10294 86 WIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 165 (226)
...+.....+.+.......+..+.++.|.+|+++|+++.++.+....++..+++.+...+.+..+|++.+++.+.+..+.
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~ 170 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILV 170 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHH
Confidence 22222222222222222234566788999999999999999999988999999998888878889999888887776665
Q ss_pred h
Q psy10294 166 F 166 (226)
Q Consensus 166 ~ 166 (226)
.
T Consensus 171 ~ 171 (392)
T PRK10473 171 L 171 (392)
T ss_pred H
Confidence 5
No 19
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.59 E-value=3.4e-14 Score=121.88 Aligned_cols=149 Identities=18% Similarity=0.218 Sum_probs=110.4
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
......|.+.+++|.+. +..+..+...++..+++++.|+++||+|||+.++.+..+..+..+.... .++...+
T Consensus 30 ~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~------~~~~~~l 103 (405)
T TIGR00891 30 LVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGF------APGYITM 103 (405)
T ss_pred HHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH------hccHHHH
Confidence 34556788888899987 7778888999999999999999999999999999888777764333333 1223333
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG--LHGTLFIYSFITGIG 165 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~i~ 165 (226)
.....+.+.......+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..+ ||+.+++.+....+.
T Consensus 104 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 104 FIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred HHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 3333333322223345556788999999999999999999999999999999888887766 998887654444333
No 20
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.58 E-value=2.3e-14 Score=132.14 Aligned_cols=148 Identities=10% Similarity=0.063 Sum_probs=107.6
Q ss_pred ecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 12 MRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 12 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
+...+|.+.++++++. +..+..+...++.+++++++|+++||+|||+.++++.++..+..+...+ .++...+.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~af------a~s~~~ll 259 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSF------VQGYGFFL 259 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH------HhhHHHHH
Confidence 4456788888899987 6778888899999999999999999999999999988877774433333 12233333
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------chhhHHHH
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWF-------------GLHGTLFI 157 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------g~~~~~~~ 157 (226)
...++.+....+..+....+++|.+|++.|++..++...+..+|..+++.+...+...+ +||+.+++
T Consensus 260 v~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i 339 (742)
T TIGR01299 260 FCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIV 339 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHH
Confidence 33333333333345777889999999999999999999999999888887766555433 57776666
Q ss_pred HHHHHHHh
Q psy10294 158 YSFITGIG 165 (226)
Q Consensus 158 ~~~~~~i~ 165 (226)
.++..++.
T Consensus 340 ~~lp~ll~ 347 (742)
T TIGR01299 340 CAFPCVFA 347 (742)
T ss_pred HHHHHHHH
Confidence 55544443
No 21
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.57 E-value=2.2e-14 Score=127.53 Aligned_cols=150 Identities=14% Similarity=0.064 Sum_probs=113.4
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
.+...+|++.+++|.+. +.+|....+.++...+.+..|+++||+|||+.++.+..+..+..+.... .++...+
T Consensus 24 iv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~------a~~~~~l 97 (495)
T PRK14995 24 VLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAF------SPTASWL 97 (495)
T ss_pred HHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH------cCCHHHH
Confidence 34566899999999987 7789999999999999999999999999999999999988874443333 1233333
Q ss_pred HHHHHHHHHHhccccchhhHHhhccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIF-PVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.....+.+....+..+.....+.+.+ |+++|+++.|+......++..++|.+.+.+.++.|||+.|++...+..+..
T Consensus 98 i~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~ 175 (495)
T PRK14995 98 IATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVM 175 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 33333333222223343334454555 789999999999999999999999999999999999999988776666554
No 22
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.57 E-value=4.5e-14 Score=121.40 Aligned_cols=150 Identities=10% Similarity=0.123 Sum_probs=115.1
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
.....+|.+.+++|.+. +.++..+...++..+++++.|++.||+|||+++..+..+..+..+.... .++...+
T Consensus 21 ~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~------~~~~~~l 94 (382)
T PRK10091 21 GIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL------SSSYLML 94 (382)
T ss_pred HHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH------hCcHHHH
Confidence 44567889999999987 6788889999999999999999999999999999998888874444333 1233333
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.....+.+.......+....++.|++|+++|+++.++......++..+++.+.+.+.+..+||+.|++.+.+..+..
T Consensus 95 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 171 (382)
T PRK10091 95 AIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVL 171 (382)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHH
Confidence 33333322222222344556788999999999999999988899999999998888888999999998887766654
No 23
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.57 E-value=1.8e-14 Score=126.98 Aligned_cols=151 Identities=18% Similarity=0.156 Sum_probs=118.2
Q ss_pred ceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 10 VSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
.......|.+.+++|.+. +..+......++..++.++.|+++||+|||+.++.+..+..+....... .++...
T Consensus 19 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~------~~~~~~ 92 (485)
T TIGR00711 19 TIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGV------APNLEL 92 (485)
T ss_pred HHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhC------cCCHHH
Confidence 345567899999999987 6788889999999999999999999999999999988887774333333 223333
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+.....+.+.......+....++.|.+|+++|+++.++......++..+++.+.+++.++++||+.|++.+.+..+..
T Consensus 93 l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~ 170 (485)
T TIGR00711 93 MIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVV 170 (485)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHH
Confidence 333343333333334466678899999999999999999999999999999999999999999999888776665554
No 24
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.56 E-value=7.6e-14 Score=117.84 Aligned_cols=154 Identities=8% Similarity=-0.020 Sum_probs=112.6
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
.....+|.+..+.+.+. +..+..+...+...++.++.|+++||+|||+.++.+..+..+...........+ ..+...+
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 95 (365)
T TIGR00900 17 ITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLG-GLNIWQV 95 (365)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcC-CCcHHHH
Confidence 34556778888888876 667888889999999999999999999999999988887766333222211111 1123333
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 165 (226)
.....+.+.......+....++.|++|+++|+++.++.+....++..+++.+.+.+.++.||++.++..+....+.
T Consensus 96 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~ 171 (365)
T TIGR00900 96 YVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAIS 171 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3333333322223345566789999999999999999999999999999999999999999999888776655544
No 25
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.56 E-value=4.5e-14 Score=121.93 Aligned_cols=150 Identities=17% Similarity=0.163 Sum_probs=111.6
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
......|.+.+++|.+. +..+......++..++.++.|+++||+|||+.+..+..+..+..+.... ..+ ...+
T Consensus 33 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----~~~-~~~~ 106 (406)
T PRK11551 33 SAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQ-----AWD-FPSL 106 (406)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH-----hcc-HHHH
Confidence 34556788889999987 6778888999999999999999999999999999988777664333333 122 2222
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.....+.+.......+....++.|.+|+++|+++.++.+....++..+++.+...+.+..+|+..+++.+....+..
T Consensus 107 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (406)
T PRK11551 107 LVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLV 183 (406)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHH
Confidence 22232222222223355567889999999999999999999999999999888888888899988887766555443
No 26
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.55 E-value=1.1e-13 Score=119.84 Aligned_cols=151 Identities=12% Similarity=0.106 Sum_probs=112.4
Q ss_pred ceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 10 VSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
..+.+.+|.+.+++|.+. +..+......++..++.++.|+++||+|||+.++.+.....+..+.... .++...
T Consensus 30 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~------~~~~~~ 103 (406)
T PRK15402 30 DMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILL------AQSIEQ 103 (406)
T ss_pred hhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH------HccHHH
Confidence 344566788888999987 6677788889999999999999999999999999888777764433333 122222
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+.....+.+.......+..+.++.|.+|+++|+++.++......++..++|.+.+.+.++.+|++.+++.+.+..+..
T Consensus 104 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~ 181 (406)
T PRK15402 104 FTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSF 181 (406)
T ss_pred HHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 222333222222223355667888999999999999998888888889999998888888899999988777776654
No 27
>TIGR00898 2A0119 cation transport protein.
Probab=99.54 E-value=7.5e-14 Score=124.05 Aligned_cols=144 Identities=18% Similarity=0.160 Sum_probs=108.8
Q ss_pred ccHHHHHhhcCCC---c-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 14 PYLVEIFQTFGVP---L-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 14 ~~~~~~~~~~g~~---~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
.+.|.+.++++++ . +..+..+...++..+++++.|+++||+|||+.++++.++..+..+.... .++...+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~------~~~~~~~ 183 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF------SPNYTVF 183 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH------cccHHHH
Confidence 5677888888887 4 5678888999999999999999999999999999988887774444444 2334444
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.....+.+....+..+....++.|.+|+++|+++.++......+|..+++.+...+.+ ||+.+++.++..++..
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~ 257 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFF 257 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHH
Confidence 4444444443434456777899999999999999999988888888888777654433 8988888777766554
No 28
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.54 E-value=2.4e-14 Score=120.39 Aligned_cols=150 Identities=19% Similarity=0.158 Sum_probs=116.9
Q ss_pred eecccHH-HHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 11 SMRPYLV-EIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 11 ~~~~~~~-~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
...+..| .+.+++|.+. +..+..+...+...++.++.|+++||+|||+.+..+..+..+..+...+ ..+.+ .
T Consensus 14 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~-----~~~~~-~ 87 (352)
T PF07690_consen 14 IISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF-----ASNFW-L 87 (352)
T ss_dssp HHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH-----HCCHH-H
T ss_pred HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh-----hhhHH-H
Confidence 4456677 6778889888 7788888999999999999999999999999999888888875222223 12333 3
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+.....+.+.......+....++.|.+|+++|+++.++......++..+++.+.+.+.++++||+.+++.+.+..+..
T Consensus 88 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (352)
T PF07690_consen 88 LLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAA 165 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHH
T ss_pred Hhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhh
Confidence 333333333333344566777899999999999999999999999999999999998888899999999888888775
No 29
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.54 E-value=1.5e-13 Score=121.16 Aligned_cols=143 Identities=15% Similarity=0.039 Sum_probs=98.9
Q ss_pred CCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh---hc--CCCch-HHHHHHHHHHH
Q psy10294 24 GVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICS---MN--LHWPG-WIPLTIFCICF 96 (226)
Q Consensus 24 g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~---~~--~~~~~-~~~~~~~~~~~ 96 (226)
+.+. +.++..+...++..+++++.|+++||+|||++++.+..+..+..+...... .. ..... ...+.....+.
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 130 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIG 130 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHH
Confidence 6665 567888899999999999999999999999999998888766333322200 00 00111 22233333333
Q ss_pred HHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH--------HhhchhhHHHHHHHHHHHhh
Q psy10294 97 WISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI--------TWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 97 ~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~i~~ 166 (226)
+....+..+....+++|++|+++|+++.++.+....+|..+++.+...+. +.+|||+.|++.+...++..
T Consensus 131 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 208 (479)
T PRK10077 131 GIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL 208 (479)
T ss_pred hhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence 33333344667778999999999999999999888888888766554332 35689999888766665554
No 30
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.53 E-value=5.9e-14 Score=118.87 Aligned_cols=149 Identities=17% Similarity=0.121 Sum_probs=109.2
Q ss_pred ceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 10 VSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
+....+.|.+.+++|.+. +..+..+...++..+++++.|+++||+|||+++..+..+..+..+.... .++...
T Consensus 20 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~------~~~~~~ 93 (377)
T TIGR00890 20 YTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAI------ADSLAA 93 (377)
T ss_pred hhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHH------HHHHHH
Confidence 455678999999999998 7788889999999999999999999999999999988887774333333 122333
Q ss_pred HHHHHHH-HHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 89 LTIFCIC-FWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 89 ~~~~~~~-~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+.....+ +.+.+. ..+.......|.+| ++|+++.++......++..+.+++...+.+..+||+.+++.+++..+..
T Consensus 94 ~~~~~~~~g~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 170 (377)
T TIGR00890 94 LYLTYGLASAGVGI-AYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVI 170 (377)
T ss_pred HHHHHHHHhHHHHH-HHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 3222222 222221 22233446677777 5699999999988888888877777777778899999988887776654
No 31
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.52 E-value=8.9e-17 Score=140.68 Aligned_cols=181 Identities=18% Similarity=0.308 Sum_probs=137.3
Q ss_pred cccccccceecccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHH--HHhhc
Q psy10294 3 PGFNSSFVSMRPYLVEIFQTFGVPLKSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALA--ICSMN 80 (226)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~--~~~~~ 80 (226)
+++.++.+.+..|.|.+.++.+.+.+ ........+...++.+++.++.||+|||+.++.+..++.++..... . ...
T Consensus 263 ~~~~~g~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~-~~~ 340 (451)
T PF00083_consen 263 FQQFSGINFIFYYSPSIFENAGISNS-FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIF-FLG 340 (451)
T ss_pred cccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccc-ccc
Confidence 45677778888999999988887755 3445566677778888888999999999999998888877333332 1 111
Q ss_pred CCC---chHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHH
Q psy10294 81 LHW---PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFI 157 (226)
Q Consensus 81 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 157 (226)
... .....+.........++.++++..+.+.+|.+|++.|+++.++....+++++.+.+.+.+.+.+..+-...+.+
T Consensus 341 ~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i 420 (451)
T PF00083_consen 341 VSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLI 420 (451)
T ss_pred cccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 111 13333444444445566677888889999999999999999999999999999999998888877763456788
Q ss_pred HHHHHHHhhhhhhcccccccccceeEEEEecc--CCCHHHHhhh
Q psy10294 158 YSFITGIGFAIRIRGVACGICAAINSIVCFLV--TKTYIGIDWH 199 (226)
Q Consensus 158 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~e--~~~~~~~~~~ 199 (226)
++.+..+.. +..++++|| +++.+|++++
T Consensus 421 ~~~~~~i~~--------------i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 421 FAGVCLIAI--------------IFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred hHHHHHHHH--------------hheeEEEeeCCCCCHHHHHhh
Confidence 888888877 788889999 8888888764
No 32
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.52 E-value=3.4e-13 Score=116.12 Aligned_cols=149 Identities=11% Similarity=-0.002 Sum_probs=109.9
Q ss_pred ecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 12 MRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 12 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
..+..|.+.+++|.+. +..+......+...++.++.|+++||+|||+.+..+.....+..+.... .++...+.
T Consensus 27 ~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~------~~~~~~l~ 100 (394)
T PRK11652 27 YVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALF------AHSLTVLI 100 (394)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH------HccHHHHH
Confidence 3455788889999998 6778888899999999999999999999999999888777664433333 12222222
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
....+.+.......+....+..|.+|.++|+++.++......++..+++.+.+.+.+..|||+.+++.+....+..
T Consensus 101 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 101 AASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 2222222211122344556778999999999999999888888999999999988888899999888776665543
No 33
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.51 E-value=5.1e-13 Score=118.95 Aligned_cols=136 Identities=13% Similarity=0.040 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHhccccchh
Q psy10294 29 SEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHW-PGWIPLTIFCICFWISGYGILALP 107 (226)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 107 (226)
..+......++..+++++.++++||+|||+++.++.++..+..+.... ..+... .+...+.....+.+....+..+..
T Consensus 58 ~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 136 (502)
T TIGR00887 58 SAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGL-SPGSSPKSVMATLCFWRFWLGVGIGGDYPLS 136 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH-ccCcccchHHHHHHHHHHHHHHHHhhhhHHH
Confidence 356778888999999999999999999999999888887774333333 111000 012233333333333333344667
Q ss_pred hHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hhchhhHHHHHHHHHHH
Q psy10294 108 WMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT-----------------------WFGLHGTLFIYSFITGI 164 (226)
Q Consensus 108 ~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~g~~~~~~~~~~~~~i 164 (226)
..+++|.+|+++|+++.++.+....+|..+++.+...+.. .++||..+.+.++..++
T Consensus 137 ~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i 216 (502)
T TIGR00887 137 AIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALL 216 (502)
T ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHH
Confidence 7899999999999999999999988888888777654322 24799888665555544
Q ss_pred h
Q psy10294 165 G 165 (226)
Q Consensus 165 ~ 165 (226)
.
T Consensus 217 ~ 217 (502)
T TIGR00887 217 A 217 (502)
T ss_pred H
Confidence 4
No 34
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.51 E-value=2.1e-13 Score=121.09 Aligned_cols=156 Identities=15% Similarity=0.147 Sum_probs=99.2
Q ss_pred cccceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy10294 7 SSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWP 84 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (226)
...+.+..|+|.++++ .|++. +.........++..++.++.|+++||+|||+.+..+.+...+....... ... ...
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-~~~-~~~ 341 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFI-LIN-SNV 341 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-HHh-CCC
Confidence 3455667789998854 68876 4455566677788899999999999999999888776654432222111 111 111
Q ss_pred hHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHHH
Q psy10294 85 GWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTLFIYSFITG 163 (226)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~ 163 (226)
...............+.+. +....+.+|.+|++.|+++.|+.+....+++.++|.+.+++.+..+ |+.+++...+...
T Consensus 342 ~~~~~~~~~~~g~~~~~~~-g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 420 (490)
T PRK10642 342 IGLIFAGLLMLAVILNCFT-GVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAV 420 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 1122222222222222222 3344577899999999999998877788888889999888877654 5555554444444
Q ss_pred Hh
Q psy10294 164 IG 165 (226)
Q Consensus 164 i~ 165 (226)
+.
T Consensus 421 i~ 422 (490)
T PRK10642 421 IG 422 (490)
T ss_pred HH
Confidence 44
No 35
>KOG0255|consensus
Probab=99.51 E-value=2.2e-13 Score=121.71 Aligned_cols=130 Identities=21% Similarity=0.243 Sum_probs=111.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchh
Q psy10294 28 KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALP 107 (226)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (226)
......++..++..+|++++|+++||+|||++++++..+..++.+.... .+++..+..+.++.+....+...+.
T Consensus 119 ~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~------a~~~~~~~~~Rfl~G~~~~~~~~~~ 192 (521)
T KOG0255|consen 119 LVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF------APNYWMFLIFRFLSGFFGSGPLTVG 192 (521)
T ss_pred HHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH------hCcHHHHHHHHHHHHhhccchhHHh
Confidence 4566788999999999999999999999999999999999996665555 4667777777777777777777888
Q ss_pred hHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 108 WMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 108 ~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+.+..|+++++.|+.+..+ ......++...+....++.. +||+.+++......+..
T Consensus 193 ~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~ 248 (521)
T KOG0255|consen 193 FGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFL 248 (521)
T ss_pred HhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHH
Confidence 8999999999999999999 88888888888888888877 79999999888887775
No 36
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.50 E-value=3.8e-13 Score=115.98 Aligned_cols=152 Identities=16% Similarity=0.128 Sum_probs=110.7
Q ss_pred ccceecccHHHHHhhcCCCc-hH-----HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcC
Q psy10294 8 SFVSMRPYLVEIFQTFGVPL-KS-----EWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNL 81 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~-~~-----~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 81 (226)
+.....+++|.+.+++|.+. +. .+...+..+...++.++.|+++||+|||+.+..+.....+.......
T Consensus 29 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~----- 103 (408)
T PRK09874 29 AFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGL----- 103 (408)
T ss_pred HHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHH-----
Confidence 33456678899999988875 32 45566777888899999999999999999998887776663333322
Q ss_pred CCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q psy10294 82 HWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFI 161 (226)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (226)
..+...+.....+.+.. .+..+....++.|.+|+++|+++.++......++..+++.+.+.+.+..+|+..+++.+.+
T Consensus 104 -~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (408)
T PRK09874 104 -AQNIWQFLILRALLGLL-GGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASV 181 (408)
T ss_pred -HhhHHHHHHHHHHHHHh-hhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 12222222222222222 2334455567789999999999999999999999999999999998989999998888777
Q ss_pred HHHhh
Q psy10294 162 TGIGF 166 (226)
Q Consensus 162 ~~i~~ 166 (226)
..+..
T Consensus 182 ~~~~~ 186 (408)
T PRK09874 182 LFLCF 186 (408)
T ss_pred HHHHH
Confidence 66554
No 37
>PRK10054 putative transporter; Provisional
Probab=99.50 E-value=1.7e-13 Score=118.50 Aligned_cols=153 Identities=7% Similarity=0.042 Sum_probs=110.4
Q ss_pred cccceecccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy10294 7 SSFVSMRPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWP 84 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (226)
.+.+...+++|.+.+ ++|++. +..+..+...+...+++++.|+++||+|||+.++.+.....+..+.... .++
T Consensus 21 ~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~-----~~~ 95 (395)
T PRK10054 21 IGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL-----VNN 95 (395)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH-----HhH
Confidence 344556677777664 589988 7788888888889999999999999999999998888777663333323 112
Q ss_pred hHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q psy10294 85 GWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGI 164 (226)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 164 (226)
.+.............+ ...+....+.+|..|+++|+++.++.+....++..++|.+.+.+.+ .+|+..|+..++...+
T Consensus 96 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i 173 (395)
T PRK10054 96 VTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAF 173 (395)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHH
Confidence 2222222222222222 2345566778899999999999999999999999999999888765 6899988877766655
Q ss_pred hh
Q psy10294 165 GF 166 (226)
Q Consensus 165 ~~ 166 (226)
..
T Consensus 174 ~~ 175 (395)
T PRK10054 174 PL 175 (395)
T ss_pred HH
Confidence 54
No 38
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.49 E-value=4.6e-13 Score=113.76 Aligned_cols=152 Identities=17% Similarity=0.189 Sum_probs=106.5
Q ss_pred cccceecccHHH-HHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy10294 7 SSFVSMRPYLVE-IFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWP 84 (226)
Q Consensus 7 ~~~~~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (226)
...+...++.|. +.+++|++. +..+......++..+++++.|+++||+|||+.++.+..+..+..+.... ...
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~-----~~~ 89 (366)
T TIGR00886 15 SVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGL-----AVQ 89 (366)
T ss_pred HHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-----Hhh
Confidence 344556778885 778899998 6788888999999999999999999999999999988888774433333 110
Q ss_pred hHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------hchhhH
Q psy10294 85 GWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW----------FGLHGT 154 (226)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~ 154 (226)
+...+.....+.+..+ +..+....+++|.+|+++|+++.++......++..+++.+.+.+.+. .+||+.
T Consensus 90 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~ 168 (366)
T TIGR00886 90 SYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWA 168 (366)
T ss_pred hHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccch
Confidence 3333333333332222 23334556888999999999999999877778877777776655542 379888
Q ss_pred H-HHHHHHHHH
Q psy10294 155 L-FIYSFITGI 164 (226)
Q Consensus 155 ~-~~~~~~~~i 164 (226)
+ +..+.+..+
T Consensus 169 ~~~~~~~~~~~ 179 (366)
T TIGR00886 169 FVIVPAGILLL 179 (366)
T ss_pred hHHHHHHHHHH
Confidence 8 333444333
No 39
>PRK10504 putative transporter; Provisional
Probab=99.49 E-value=2.5e-13 Score=119.65 Aligned_cols=152 Identities=13% Similarity=0.015 Sum_probs=113.7
Q ss_pred cceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 9 FVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
.+.+.++.|.+.+++|.+. +..+..+...++..++.++.|+++||+|||+.++.+..+..+..+.... ..+.+.
T Consensus 26 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-----~~~~~~ 100 (471)
T PRK10504 26 TTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCAL-----SGTLNE 100 (471)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH-----hCCHHH
Confidence 3456678999999999987 5667778888888999999999999999999998887776663333233 122222
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+.....+.+.......+....++.|.+|+++|+++.++......++..+++.+.+.+.++.|||+.|.+......+..
T Consensus 101 -l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~ 178 (471)
T PRK10504 101 -LLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGA 178 (471)
T ss_pred -HHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 222222222222223456667888999999999999999999999999999999999999999999888766555544
No 40
>PRK11043 putative transporter; Provisional
Probab=99.49 E-value=7.1e-13 Score=114.41 Aligned_cols=149 Identities=11% Similarity=0.057 Sum_probs=108.0
Q ss_pred ecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 12 MRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 12 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
..+..|.+.+++|.+. +..+..+...++..++.++.|+++||+|||+.+..+..+..+..+.... .++...+.
T Consensus 25 ~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~------~~~~~~l~ 98 (401)
T PRK11043 25 YLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW------VESAAQLL 98 (401)
T ss_pred HHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH------hcCHHHHH
Confidence 3444566678889987 7788888999999999999999999999999999888777663333333 12222222
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
....+.+.......+....++.|.+|+++|++..+.......++..+++.+.+.+.+++|||..+++.+.+..+..
T Consensus 99 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 174 (401)
T PRK11043 99 VLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLI 174 (401)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 2222222111112233445778999999999998888888888999999999999999999998888777766554
No 41
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.48 E-value=4.8e-13 Score=115.88 Aligned_cols=153 Identities=14% Similarity=0.103 Sum_probs=111.1
Q ss_pred cccceecccHHHHH-hhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy10294 7 SSFVSMRPYLVEIF-QTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWP 84 (226)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (226)
.+.+...+++|.++ +++|.+. +.+.......+...+.+++.|+++||+|||+.+..+.....+..+.... .++
T Consensus 24 ~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~-----~~~ 98 (400)
T PRK11646 24 LGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI-----AHE 98 (400)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH-----hcc
Confidence 34455566777655 5678887 6677777778888888999999999999999999988888874444333 122
Q ss_pred hHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q psy10294 85 GWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGI 164 (226)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 164 (226)
.+. +.......+.......+....++.|.+|+++|+++.|+......++..+++.+.+.+. .+||++.|++.+....+
T Consensus 99 ~~~-l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~ 176 (400)
T PRK11646 99 PWL-LWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVL 176 (400)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHH
Confidence 222 2222322222222233455567889999999999999999999999999999999888 67999988887766555
Q ss_pred hh
Q psy10294 165 GF 166 (226)
Q Consensus 165 ~~ 166 (226)
..
T Consensus 177 ~~ 178 (400)
T PRK11646 177 AA 178 (400)
T ss_pred HH
Confidence 43
No 42
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.47 E-value=1.6e-12 Score=108.85 Aligned_cols=153 Identities=17% Similarity=0.161 Sum_probs=117.6
Q ss_pred ccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 8 SFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
+........|.+.++.|.+. +..+......+...++.++.|+++||+|||+.+..+..+..+....... . ++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~-----~-~~~ 87 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF-----A-SSL 87 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH-----h-ccH
Confidence 44556777888999888887 6778888899999999999999999999999999888888875444444 1 223
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
..........+.......+....+..|.+|+++|++..++.+....++..+++.+.+.+.+..+|+..+++.+....+..
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLA 167 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 33333333333322233455667899999999999999999999999999999999999998899988887766655543
No 43
>KOG1330|consensus
Probab=99.47 E-value=5.2e-15 Score=126.66 Aligned_cols=154 Identities=10% Similarity=-0.040 Sum_probs=127.3
Q ss_pred HHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHH
Q psy10294 16 LVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCI 94 (226)
Q Consensus 16 ~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (226)
.+.+.+.+|+++ ..+.......+...++++++|++.||++||+++.+|..+..+..++..+ ....+.+++...
T Consensus 56 ~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~f------s~~Fwq~~l~R~ 129 (493)
T KOG1330|consen 56 LKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGF------SNHFWQVLLCRG 129 (493)
T ss_pred hHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 445556678887 6778889999999999999999999999999999999999887766666 244555555665
Q ss_pred HHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHHHHhhhhhhccc
Q psy10294 95 CFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTLFIYSFITGIGFAIRIRGV 173 (226)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~i~~~~~~~~~ 173 (226)
+.+..-....++...+++|.||..+|+++.++.+....+|+.++..+...+.++.+ ||+.|+..+++..+..
T Consensus 130 ~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~------- 202 (493)
T KOG1330|consen 130 FVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVG------- 202 (493)
T ss_pred HhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHH-------
Confidence 55555556678888999999999999999999999999999999888887777666 9999999999888877
Q ss_pred ccccccceeEEEEecc
Q psy10294 174 ACGICAAINSIVCFLV 189 (226)
Q Consensus 174 ~~~~~~~~~~~~~~~e 189 (226)
++.+++.+|
T Consensus 203 -------~L~~~f~~e 211 (493)
T KOG1330|consen 203 -------LLVFLFVRE 211 (493)
T ss_pred -------HHHHhhccC
Confidence 666677777
No 44
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.47 E-value=1.4e-12 Score=113.31 Aligned_cols=143 Identities=17% Similarity=0.159 Sum_probs=108.6
Q ss_pred ecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 12 MRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 12 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
..+..|.+.+++|.+. +..+..+...++..+++++.|+++||+|||+.+..+.....+....... ..+...+.
T Consensus 37 ~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~------~~~~~~l~ 110 (426)
T PRK12307 37 IFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGL------ASGVIMLT 110 (426)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH------HhHHHHHH
Confidence 3556778888899987 6778888899999999999999999999999999999888874433333 12233333
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHH
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSF 160 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (226)
....+.+....+..+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..+||+.+++...
T Consensus 111 ~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 111 LSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 3333332222233455667889999999999999999999999999999888888888899998876443
No 45
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.47 E-value=5.4e-13 Score=113.55 Aligned_cols=153 Identities=10% Similarity=-0.038 Sum_probs=103.8
Q ss_pred ccceecccHHHHH-hhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHH-HHHHHHHHHHHHHhhcCCCc
Q psy10294 8 SFVSMRPYLVEIF-QTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWST-GICFVFTIALAICSMNLHWP 84 (226)
Q Consensus 8 ~~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 84 (226)
+.....+.+|.+. +++|.+. +..+..+...+...+.+++.|.++||+|||+.++... ....+....... .+
T Consensus 12 ~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~------~~ 85 (375)
T TIGR00899 12 AGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW------NR 85 (375)
T ss_pred HHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh------cc
Confidence 3445566677665 5689887 6677778888888899999999999999988765543 333333222222 12
Q ss_pred hHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhH--HHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q psy10294 85 GWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVA--CGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFIT 162 (226)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 162 (226)
++..+.......+.......+....+..|..|++.|+++ .+.......++..+++.+.+.+.++++||+.+++.+...
T Consensus 86 ~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~ 165 (375)
T TIGR00899 86 NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAF 165 (375)
T ss_pred hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHH
Confidence 233333223322233333445555677788887777754 577777788999999999999989899999999888776
Q ss_pred HHhh
Q psy10294 163 GIGF 166 (226)
Q Consensus 163 ~i~~ 166 (226)
.+..
T Consensus 166 ~~~~ 169 (375)
T TIGR00899 166 VLCG 169 (375)
T ss_pred HHHH
Confidence 6554
No 46
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.46 E-value=5.4e-13 Score=117.48 Aligned_cols=141 Identities=9% Similarity=-0.025 Sum_probs=106.2
Q ss_pred hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHh
Q psy10294 22 TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISG 100 (226)
Q Consensus 22 ~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (226)
+++.+. +.+...+...++..++.++.|+++||+|||+.+..+.++..+..+.... . .......+....++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~---~~~~~~~l~~~r~~~G~~~ 145 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPW-A---AGGGIALVVFCRVIQGLAQ 145 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHH-H---HHcCchHHHHHHHHHHHhc
Confidence 566766 5567788889999999999999999999999999888877763332221 0 0122223333344333333
Q ss_pred ccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHHHhh
Q psy10294 101 YGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWF-GLHGTLFIYSFITGIGF 166 (226)
Q Consensus 101 ~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~i~~ 166 (226)
....+....+++|++|+++|+++.++......++..+++.+.+.+.+.+ |||..|++.+++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~ 212 (465)
T TIGR00894 146 GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWS 212 (465)
T ss_pred ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHH
Confidence 3445666778999999999999999999999999999999999988884 99999988877766654
No 47
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.46 E-value=9.3e-13 Score=116.68 Aligned_cols=144 Identities=19% Similarity=0.235 Sum_probs=109.3
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
......|.+.+++|.+. +..+......++..++.++.|+++||+|||+.++.+..+..+..+.... ..+...+
T Consensus 38 ~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~------~~~~~~l 111 (496)
T PRK03893 38 LITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGF------APGYWTL 111 (496)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH------HhHHHHH
Confidence 34456788888899987 6678888888999999999999999999999999888877774333333 1223333
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHH
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSF 160 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (226)
.....+.+....+..+....++.|.+|+++|+++.++......++..+++.+.+.+.++++||+.+++...
T Consensus 112 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~ 182 (496)
T PRK03893 112 FIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGIL 182 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 33333333333334455567888999999999999999999999999999999999999999988776433
No 48
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.46 E-value=1.1e-12 Score=116.09 Aligned_cols=150 Identities=13% Similarity=0.038 Sum_probs=104.1
Q ss_pred ceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 10 VSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
+...++.|.+.+++|++. +..+..+...++..++.++.|+++||+|||+++..+.++..+..+.... .. +...
T Consensus 53 ~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~-----~~-s~~~ 126 (476)
T PLN00028 53 FAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSL-----VS-SATG 126 (476)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-----hc-CHHH
Confidence 345667888999999987 6667777788888999999999999999999998888777664433333 12 2222
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH---------hhchhhHHHHHH
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT---------WFGLHGTLFIYS 159 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~ 159 (226)
+....++.+....+..+ ...+++|++|+++|+++.|+.+....++..+++.+.+.+.. ..|||+.|++.+
T Consensus 127 l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g 205 (476)
T PLN00028 127 FIAVRFFIGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPG 205 (476)
T ss_pred HHHHHHHHHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHH
Confidence 22222222222222222 33467899999999999999987777777777665554432 258999999888
Q ss_pred HHHHHhh
Q psy10294 160 FITGIGF 166 (226)
Q Consensus 160 ~~~~i~~ 166 (226)
++.++..
T Consensus 206 ~l~l~~~ 212 (476)
T PLN00028 206 LLHIIMG 212 (476)
T ss_pred HHHHHHH
Confidence 8776654
No 49
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.46 E-value=1e-13 Score=117.75 Aligned_cols=149 Identities=11% Similarity=0.071 Sum_probs=123.1
Q ss_pred ecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 12 MRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 12 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
+..-.|.+.++.++|. +.....+...+.+.++.++.|.++||.+.|..+-.++++++++.+.+-+ ..+-....+
T Consensus 48 F~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gf-----s~s~~~~~~ 122 (448)
T COG2271 48 FNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGF-----SPSLFLFAV 122 (448)
T ss_pred HhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhh-----hhHHHHHHH
Confidence 3455788888888988 7788999999999999999999999999999999999999985555544 223344445
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHH--HHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTY--VTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+..+.+.+.+.|+.|. ...++.++|+++||+..++.+...++|+.+.+.+. .....+.+||..|+.-+++.++..
T Consensus 123 l~~lng~fQg~Gwpp~-~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiiva 199 (448)
T COG2271 123 LWVLNGWFQGMGWPPC-ARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVA 199 (448)
T ss_pred HHHHHHHHhcCCCcHH-HHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Confidence 5556667777776554 45677999999999999999999999999999998 888888899999999998888776
No 50
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.45 E-value=3.8e-12 Score=109.98 Aligned_cols=147 Identities=15% Similarity=-0.017 Sum_probs=111.6
Q ss_pred ceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 10 VSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
+.+.+.+|.+.+++|.+. +..+..+...++..++++..|+++||+|||+++..+..+..+..+.... .++...
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~------a~~~~~ 99 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL------YPQSAL 99 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH------CcchHH
Confidence 556788999999999998 7788889999999999999999999999999999999999885554444 123333
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHH
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWF-GLHGTLFIYSFITG 163 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~ 163 (226)
+.....+.+.......+....++.|.+| ++|+++.+........|..+++.+.+.+.++. +||..+.+++....
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~ 174 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAV 174 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3333333322222233445567888887 77999999999988899999999988888875 89987766555433
No 51
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.45 E-value=1.2e-12 Score=115.17 Aligned_cols=150 Identities=9% Similarity=0.035 Sum_probs=100.6
Q ss_pred cccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 13 RPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
.+..|.+.++ |++. +..+..+...++..+++++.|+++||+|||++++.+..+..+..+.... ... ...+...+..
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~-~~~-~~~~~~~~~~ 125 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGF-VPW-ATSSIAVMFV 125 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHh-hhc-ccccHHHHHH
Confidence 4567777777 8887 6778888999999999999999999999999999888887774433332 100 1112222222
Q ss_pred H-HHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 92 F-CICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFL-VTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 92 ~-~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
. .+.+.+.+. ..+.....+.|++|+++|+++.++.+....+++.+ ++..........+||+.|++.+.+..+..
T Consensus 126 ~~~l~gi~~g~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~ 201 (452)
T PRK11273 126 LLFLCGWFQGM-GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVA 201 (452)
T ss_pred HHHHHHHHHhc-cchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 2 222233332 22333456779999999999999988888887654 44332233334489999888777666654
No 52
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.45 E-value=7.3e-13 Score=115.48 Aligned_cols=150 Identities=17% Similarity=0.055 Sum_probs=102.8
Q ss_pred cccHHHHHhhcCCC--------c-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10294 13 RPYLVEIFQTFGVP--------L-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 13 ~~~~~~~~~~~g~~--------~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
....|.+..+++.+ . +..+..+...++..+++++.|+++||+|||+.++.+..+..+..+.... . . ..
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~-~-~-~~ 124 (481)
T TIGR00879 48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGL-A-A-FA 124 (481)
T ss_pred hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHH-h-c-cc
Confidence 33455555555554 4 5678888999999999999999999999999999888887773333222 0 0 11
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHH---HHHHHhhchhhHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTY---VTSITWFGLHGTLFIYSF 160 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~ 160 (226)
.+...+.....+.+.......+....+++|.+|+++|+++.++.+....+|..+++.+. ....+..+||+.|++.+.
T Consensus 125 ~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~ 204 (481)
T TIGR00879 125 LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLI 204 (481)
T ss_pred cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHH
Confidence 22112222222222222223355667899999999999999999999999999999887 444466789998888555
Q ss_pred HHHHh
Q psy10294 161 ITGIG 165 (226)
Q Consensus 161 ~~~i~ 165 (226)
...+.
T Consensus 205 ~~~~~ 209 (481)
T TIGR00879 205 PAGLL 209 (481)
T ss_pred HHHHH
Confidence 44444
No 53
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.45 E-value=2.9e-12 Score=113.85 Aligned_cols=146 Identities=16% Similarity=0.089 Sum_probs=96.5
Q ss_pred ccHHHHHhhcCCCc-h-HHHH-----HHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 14 PYLVEIFQTFGVPL-K-SEWV-----LVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 14 ~~~~~~~~~~g~~~-~-~~~~-----~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
+..|.+.++++.+. + ..+. .....++..+|++++|+++||+|||+++.++.++..+..+.... .++.
T Consensus 37 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~------~~~~ 110 (490)
T PRK10642 37 FVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGL------IPSY 110 (490)
T ss_pred HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHh------cccH
Confidence 44566666664332 2 1221 24556778899999999999999999999999998885444444 1222
Q ss_pred H--------HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH--------Hhhc
Q psy10294 87 I--------PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI--------TWFG 150 (226)
Q Consensus 87 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g 150 (226)
. .+....++.+....+..+....+++|++|+++|++..++......+|..+++.+...+. ..+|
T Consensus 111 ~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~g 190 (490)
T PRK10642 111 ATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWG 190 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCcc
Confidence 1 13333333333333344566779999999999999999988777777776665544332 3579
Q ss_pred hhhHHHHHHHHHHHh
Q psy10294 151 LHGTLFIYSFITGIG 165 (226)
Q Consensus 151 ~~~~~~~~~~~~~i~ 165 (226)
||+.|++.+.+.++.
T Consensus 191 WR~~f~i~~~~~l~~ 205 (490)
T PRK10642 191 WRIPFFIALPLGIIG 205 (490)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998866544443
No 54
>KOG0252|consensus
Probab=99.44 E-value=1e-13 Score=118.72 Aligned_cols=180 Identities=17% Similarity=0.250 Sum_probs=131.9
Q ss_pred ccccccceecccHHHHHhhcCCCc-hHHH---------HHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHH
Q psy10294 4 GFNSSFVSMRPYLVEIFQTFGVPL-KSEW---------VLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIA 73 (226)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~-~~~~---------~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~ 73 (226)
..-..+|....+...++++.|+.. +... ...+.....++|..+...++|+.|||+..+.+.+++.++.+.
T Consensus 315 llDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~ 394 (538)
T KOG0252|consen 315 LLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFV 394 (538)
T ss_pred hhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHH
Confidence 344567778888889998877654 2211 122233333456667778999999999999999999884444
Q ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----h
Q psy10294 74 LAICSMNLHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT-----W 148 (226)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 148 (226)
+.. ..+........+++..+...+...|++....++.+|.||++.|+++.|++...+..|++++...+.++.+ .
T Consensus 395 ~~~-~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~ 473 (538)
T KOG0252|consen 395 IAG-PYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPN 473 (538)
T ss_pred HcC-CcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCcc
Confidence 333 2221112223344445555667778888888899999999999999999999999999999999999988 7
Q ss_pred hchhhHHHHHHHHHHHhhhhhhcccccccccceeEEEEecc--CCCHHHHhhh
Q psy10294 149 FGLHGTLFIYSFITGIGFAIRIRGVACGICAAINSIVCFLV--TKTYIGIDWH 199 (226)
Q Consensus 149 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~e--~~~~~~~~~~ 199 (226)
.+.+.++++.+...+++. + ..+++|| +|+.||++++
T Consensus 474 ~g~~~v~~i~~~~~~~gi--------------~-~T~l~pEtk~~~leei~~e 511 (538)
T KOG0252|consen 474 IGVRNVFIILAGCMLLGI--------------L-FTLLIPETKGKSLEEISNE 511 (538)
T ss_pred ccchHHHHHHHHHHHHhH--------------h-eeEEeecccccCHHHhcCh
Confidence 788999999999988885 4 4456789 7788887655
No 55
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.44 E-value=1.1e-12 Score=114.93 Aligned_cols=149 Identities=9% Similarity=0.019 Sum_probs=102.8
Q ss_pred ccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHH
Q psy10294 14 PYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIF 92 (226)
Q Consensus 14 ~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 92 (226)
...|.+.+ .|++. +..+......++..++.++.|+++||+|||+.+..+.++..+..+.... . .....+...+...
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~ 124 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGF-V-PWATSSIAIMFVL 124 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhc-c-ccccchHHHHHHH
Confidence 34565554 58887 6778888999999999999999999999999988887777664333222 0 0001222222222
Q ss_pred H-HHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH-HhhchhhHHHHHHHHHHHhh
Q psy10294 93 C-ICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI-TWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 93 ~-~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~i~~ 166 (226)
. ..+.+.+. ..+.....+.|.+|+++|+++.++.+....+++.+++.+.+... .+.+||..|++.+.+..+..
T Consensus 125 ~~l~g~~~g~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~ 199 (438)
T TIGR00712 125 LFLNGWFQGM-GWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVA 199 (438)
T ss_pred HHHHHHHhhc-chHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 2 22222222 22334457789999999999999999999999988887766544 35689999988887776654
No 56
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.44 E-value=4.2e-12 Score=110.98 Aligned_cols=150 Identities=12% Similarity=-0.040 Sum_probs=95.6
Q ss_pred cccHHHHHhhcC---CCc-hHHH---HHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCch
Q psy10294 13 RPYLVEIFQTFG---VPL-KSEW---VLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPG 85 (226)
Q Consensus 13 ~~~~~~~~~~~g---~~~-~~~~---~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (226)
.+..|.+.++++ .+. +... ......++..++++++|+++||+|||+++..+.....+..+.... . ++..
T Consensus 42 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~---~~~~ 117 (432)
T PRK10406 42 SFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIAC-L---PGYE 117 (432)
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhh-c---CCch
Confidence 344666777764 332 2112 223444555699999999999999999999999988884444333 0 1111
Q ss_pred ------HHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH--------Hhhch
Q psy10294 86 ------WIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI--------TWFGL 151 (226)
Q Consensus 86 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~ 151 (226)
...+...+...+....+..+....+++|.+|+++|++..++.+.....|..+++.+...+. ..+||
T Consensus 118 ~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gW 197 (432)
T PRK10406 118 TIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGW 197 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccch
Confidence 1223333333333323344667789999999999999999887766666666665543332 25799
Q ss_pred hhHHHHHHHHHHHhh
Q psy10294 152 HGTLFIYSFITGIGF 166 (226)
Q Consensus 152 ~~~~~~~~~~~~i~~ 166 (226)
|..|++.++..++..
T Consensus 198 r~~F~i~~~~~ll~~ 212 (432)
T PRK10406 198 RIPFALGAVLAVVAL 212 (432)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999987666655543
No 57
>PRK03699 putative transporter; Provisional
Probab=99.43 E-value=7.4e-12 Score=108.06 Aligned_cols=150 Identities=7% Similarity=0.048 Sum_probs=109.5
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
.+...+|.+.+++|++. +..+..+...++..++.++.|++.||+|||+++..+..+..+....... .++.+...
T Consensus 25 ~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~-----~~~~~~~~ 99 (394)
T PRK03699 25 VTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMF-----SHSLALFS 99 (394)
T ss_pred HHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-----cchHHHHH
Confidence 45566889999999987 6677888889999999999999999999999998888777664433333 12222222
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT-WFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~i~~ 166 (226)
......+.+.+. ..+....++.|.+|+++|+++.+..+....+++.+++.+.+.+.+ ..+||+.+...+.+.++..
T Consensus 100 ~~~~l~G~~~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~ 176 (394)
T PRK03699 100 IAMFVLGVVSGI-TMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIF 176 (394)
T ss_pred HHHHHHHHhhHh-hccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 222222222222 234455678899999999999998888888888888888877654 5799999988777665543
No 58
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.42 E-value=5e-12 Score=111.87 Aligned_cols=154 Identities=12% Similarity=0.051 Sum_probs=110.2
Q ss_pred cccceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc-CChHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10294 7 SSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF-GKRPMSLWSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
.++|.+..++|.++++ +|++. +.............++.+++|+++||+ |||+.++++.++..+..+.... . ..
T Consensus 23 fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~-~---~~ 98 (493)
T PRK15462 23 FSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA-S---EI 98 (493)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH-h---hc
Confidence 3567777888988765 78887 666777777788889999999999999 9999999888887773332222 0 11
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcc--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVR--IRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFI 161 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (226)
..............+.+. ..+....+++|.+|++ .|.++.++.++..++|+.++|.+.+++.++.||+..|...++.
T Consensus 99 ~~~~~~l~l~li~iG~G~-~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaig 177 (493)
T PRK15462 99 HPSFLYLSLAIIVCGYGL-FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVG 177 (493)
T ss_pred chhHHHHHHHHHHHhccc-ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH
Confidence 111122212222222221 2344557889999985 7999999999999999999999999999999999988876544
Q ss_pred HHHh
Q psy10294 162 TGIG 165 (226)
Q Consensus 162 ~~i~ 165 (226)
..++
T Consensus 178 m~l~ 181 (493)
T PRK15462 178 MIAG 181 (493)
T ss_pred HHHH
Confidence 4333
No 59
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.42 E-value=6.8e-13 Score=117.13 Aligned_cols=154 Identities=9% Similarity=0.003 Sum_probs=109.0
Q ss_pred ecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 12 MRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 12 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
+....|.+.+++|.+. +.++..+...++..++.++.|+++||+|||+++..+.++..+..+.... ......++...+.
T Consensus 48 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 126 (467)
T PRK09556 48 FKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGA-SLGSGSVSLGLMI 126 (467)
T ss_pred hhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHH-HHhcccchHHHHH
Confidence 3445788899999988 7788888999999999999999999999999998887777663322221 0000122333333
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh---chhhHHHHHHHHHHHhh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWF---GLHGTLFIYSFITGIGF 166 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~i~~ 166 (226)
......+.......+....+++|++|+++|+++.|+......+|..+++.+..++.+.+ +|+..|.+.+.+.++..
T Consensus 127 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~ 205 (467)
T PRK09556 127 ALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIG 205 (467)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHH
Confidence 33333333222233556678999999999999999999988999999888877666653 58877777666655544
No 60
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.41 E-value=2.7e-12 Score=113.04 Aligned_cols=149 Identities=17% Similarity=0.188 Sum_probs=107.9
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
.+..+.|.+.+++|.+. +..+..+...+...++.++.|+++||+|||+.++.+.++..+..+.... ..+.+...
T Consensus 37 ~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~-----~~~~~~l~ 111 (455)
T TIGR00892 37 AVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASF-----SSNVIELY 111 (455)
T ss_pred chhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHH-----hhhHHHHH
Confidence 45667889999999987 6777777777788889999999999999999999888777663333323 11112221
Q ss_pred HHHHHHHHHHhccc-cchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGI-LALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.....+ .+.+.+. .+....++.|++| ++|+++.++.+....++..+++.+.+.+.+.+|||+.|++.+++.++..
T Consensus 112 ~~~~~l-~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 187 (455)
T TIGR00892 112 LTAGFI-TGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCC 187 (455)
T ss_pred HHHHHH-HHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 112122 1222222 2333456778886 7899999999999999999999999999999999999999888766543
No 61
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.41 E-value=4.4e-12 Score=92.36 Aligned_cols=126 Identities=18% Similarity=0.160 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHHhhcc
Q psy10294 35 LTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWMLMSEI 114 (226)
Q Consensus 35 ~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 114 (226)
...++..++.+..+++.||+|||+.+..+.....+..+.... ..+.+.........+.. .....+..+.+..|.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL-----SSNITVLIIARFLQGFG-AAFALVAGAALIADI 79 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHH-HHHHHHhHHHHHHHH
Confidence 345677889999999999999999998887777664333333 12222222222222222 222345666788999
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 115 FPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 115 ~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+|+++|+++.++.+....++..+++.+.+.+.+..+|+..+++.+....+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAF 131 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888899888887777666654
No 62
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.41 E-value=3.7e-12 Score=117.66 Aligned_cols=129 Identities=17% Similarity=0.175 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHH
Q psy10294 31 WVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWML 110 (226)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (226)
....+..++.+++.+++++++||+|||++++.+.++.+++.+.... .......+...++. .+...+..+..+.+
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~-----~~s~~~ll~~~~l~-g~~~~~~~~~~~a~ 672 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSF-----GNSESAMIALLCLF-GGLSIAAWNALDVL 672 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-----HccHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 3455667888999999999999999999999888888774444333 12222222222222 23233344667789
Q ss_pred hhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 111 MSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 111 ~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
++|++|++.|++++|+.+..+++|++++|.+.+.+.+. +...++++.+++.+++.
T Consensus 673 ~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ 727 (742)
T TIGR01299 673 TVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGG 727 (742)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887765 34456666666665554
No 63
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.40 E-value=9.2e-12 Score=110.68 Aligned_cols=149 Identities=11% Similarity=0.023 Sum_probs=106.6
Q ss_pred cccceecccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10294 7 SSFVSMRPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNK-FGKRPMSLWSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~-~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
.++|.+..+++.+.+ ++|.+. +..+.............+++|+++|| +|||++++++.++..+..+.... . ..
T Consensus 28 ~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~-~---~~ 103 (489)
T PRK10207 28 FGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGM-S---LL 103 (489)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHH-h---cc
Confidence 455667777777765 588887 56677777776777778899999999 99999999999999884433333 0 11
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcc--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVR--IRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSF 160 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (226)
............ +.......+....++.|.+|++ +|+.+.++.+...++|..+++.+.+++.++.|||+.|++.++
T Consensus 104 ~~~ll~~~~~l~-~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 104 KPDLIFIALGTI-AVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred chhHHHHHHHHH-HhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 112121222222 2222223455667899999987 457789999999999999999999999999999998887543
No 64
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.40 E-value=4.2e-12 Score=109.95 Aligned_cols=146 Identities=15% Similarity=0.066 Sum_probs=99.9
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
....+.|.+.+++|.+. +..+..+...+...+++++.|++.||+|||+.+..+..+..+....... ......++..+
T Consensus 31 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~l 108 (402)
T TIGR00897 31 LEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIV--FGLGHANYPLI 108 (402)
T ss_pred hHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH--HhccCccHHHH
Confidence 34557788888999987 7788888999999999999999999999999999988887773322211 00011223333
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHH-HHHHHHHHHHHHhhchhhHHHHH
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVC-FLVTKTYVTSITWFGLHGTLFIY 158 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~ 158 (226)
.....+.+.......+.....+.|.+|+++|+++.|+.+....++. ..++.+.+.+.+.+||+..++..
T Consensus 109 ~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~ 178 (402)
T TIGR00897 109 LLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSA 178 (402)
T ss_pred HHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 3333322211111223334567788999999999999999988886 57788777777778865544433
No 65
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.38 E-value=3.7e-12 Score=112.86 Aligned_cols=146 Identities=18% Similarity=0.159 Sum_probs=104.7
Q ss_pred ecccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 12 MRPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 12 ~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
...++|.+.+ ++|.+. +..+..+...++..++.++.++++||+|||+.+..+..+..+..+.... . ........
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~ 369 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFA--I--GGANVWVL 369 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh--c--cccHHHHH
Confidence 3457888885 788887 6677888888999999999999999999999988776655543222222 0 11222222
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFI 161 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (226)
........+.+.+..+....+++|.+|++.|+++.++.+....+++.++|.+.+.+.+++|++..+...+..
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 370 GLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 222222223333444555668889999999999999999999999999999999999999988776554443
No 66
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.37 E-value=1.3e-11 Score=104.43 Aligned_cols=149 Identities=15% Similarity=0.126 Sum_probs=106.3
Q ss_pred ccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHH
Q psy10294 14 PYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIF 92 (226)
Q Consensus 14 ~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 92 (226)
.+.+.+.++.+.+. +.........+...++.++.+++.||+|||+.+..+..+..+....... . + ...........
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~~~~~~~~ 302 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLF-I-P-MLNDVLFLATV 302 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH-c-c-cchhHHHHHHH
Confidence 44556667778776 4566777888889999999999999999999988877776663333322 0 0 11111121222
Q ss_pred HHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 93 CICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.......+ ...+....+++|.+|+++|+++.|+.+....++..+++.+.+.+.++.||+..+.+.+.+.++..
T Consensus 303 ~~~g~~~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 303 ALVFFTWG-GTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHhc-cchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 22222222 22234456788999999999999999999999999999999999999999988888777766653
No 67
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.37 E-value=1.5e-11 Score=108.98 Aligned_cols=153 Identities=13% Similarity=0.036 Sum_probs=112.6
Q ss_pred cccceecccHHHHHhh---cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcC
Q psy10294 7 SSFVSMRPYLVEIFQT---FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNK-FGKRPMSLWSTGICFVFTIALAICSMNL 81 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~-~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 81 (226)
.+++.+..++|.++++ +|++. +..+..........++++++|+++|| +|||+++.++..+..+..+....
T Consensus 24 ~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~----- 98 (475)
T TIGR00924 24 FSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM----- 98 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHh-----
Confidence 4556777888888765 78887 77788888899999999999999999 89999999999888774433333
Q ss_pred CCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcch---hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q psy10294 82 HWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRI---RGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIY 158 (226)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~---R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (226)
....+.......+.+.+.+ ...+....+++|++|+++ |+++.++.+...++|..+++.+.+++.++.||+..|...
T Consensus 99 ~~~~~~~~~~~~l~g~g~g-~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~ 177 (475)
T TIGR00924 99 SIYPDLIFYGLGTIAVGSG-LFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLA 177 (475)
T ss_pred cccHhHHHHHHHHHHhccc-cccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 1122222222222222221 234556678889998754 888999999999999999999999999989999988876
Q ss_pred HHHHHHh
Q psy10294 159 SFITGIG 165 (226)
Q Consensus 159 ~~~~~i~ 165 (226)
+....+.
T Consensus 178 ~~~~~~~ 184 (475)
T TIGR00924 178 AVGMVIG 184 (475)
T ss_pred HHHHHHH
Confidence 6544433
No 68
>PRK12382 putative transporter; Provisional
Probab=99.37 E-value=1.9e-11 Score=105.26 Aligned_cols=154 Identities=7% Similarity=-0.039 Sum_probs=105.3
Q ss_pred eecccHHHH-HhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcC--CCchH
Q psy10294 11 SMRPYLVEI-FQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNL--HWPGW 86 (226)
Q Consensus 11 ~~~~~~~~~-~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~ 86 (226)
...+.+|.+ .+++|.|. +.++..+...+...+++++.|+++||+|||+.++.+.+.+.+..+......... ...+.
T Consensus 33 ~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (392)
T PRK12382 33 LPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKF 112 (392)
T ss_pred HHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHH
Confidence 344566654 46789988 778888899999999999999999999999999988877665322211100000 01222
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGI 164 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 164 (226)
..+.....+.+.......+....++.|.+|+++|+++.++.......+..+++.+.+.+.+++||+..+.+......+
T Consensus 113 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 190 (392)
T PRK12382 113 ALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLL 190 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 333333332222222223444457789999999999999999888889999999999888888998766554444333
No 69
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.37 E-value=2.5e-11 Score=103.13 Aligned_cols=151 Identities=12% Similarity=-0.032 Sum_probs=101.2
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc-----CChHHHH-HHHHHHHHHHHHHHHHhhcCCC
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF-----GKRPMSL-WSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~-----Grr~~~~-~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
...+-.|.+.+++|++. +..+.... .+...+ .+++|+++||+ |||+.++ .+.+...+......+ . . ..
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~-~-~-~~ 80 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSF-L-V-PS 80 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHc-C-C-cc
Confidence 34556889999999997 55555433 333333 88999999998 8998754 445444443333322 1 1 11
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------hhhHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG--------LHGTL 155 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------~~~~~ 155 (226)
.....+...............+....+++|++|+++|+++.++......+|..+++.+...+.++.+ ||..|
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f 160 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF 160 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence 2222222222222222223345556788999999999999999999999999999999988888888 99999
Q ss_pred HHHHHHHHHhh
Q psy10294 156 FIYSFITGIGF 166 (226)
Q Consensus 156 ~~~~~~~~i~~ 166 (226)
++.++..++..
T Consensus 161 ~i~ai~~l~~~ 171 (356)
T TIGR00901 161 FWTALLILPGL 171 (356)
T ss_pred HHHHHHHHHHH
Confidence 88877666654
No 70
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.36 E-value=1.5e-11 Score=106.11 Aligned_cols=155 Identities=11% Similarity=0.062 Sum_probs=107.6
Q ss_pred eecccHHHH-HhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCc--hH
Q psy10294 11 SMRPYLVEI-FQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWP--GW 86 (226)
Q Consensus 11 ~~~~~~~~~-~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~ 86 (226)
...+.+|.+ .+++|.+. +..+..+...+...+++++.|+++||+|||++++.+..+..+............... ..
T Consensus 33 ~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (399)
T PRK05122 33 LPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSL 112 (399)
T ss_pred HHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHH
Confidence 345667765 46789887 778888999999999999999999999999999998887766322221101111111 12
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHh
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 165 (226)
..+.......+.......+....+..|..|+++|+++.++......++..+++.+.+.+.+++||+..+++...+..+.
T Consensus 113 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 113 LLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLG 191 (399)
T ss_pred HHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 2222222222222222334455677899999999999999888888888999999999989999998777665555443
No 71
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.36 E-value=4.1e-12 Score=112.18 Aligned_cols=153 Identities=12% Similarity=0.043 Sum_probs=102.9
Q ss_pred ceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 10 VSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
+....|.|.++++ +|++. +..+......++..++.+++|+++||+|||+..........+....... .. ..+...
T Consensus 275 ~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~--~~-~~~~~~ 351 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVY--QH-ATSEYM 351 (467)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH--Hh-cCcHHH
Confidence 3456789988754 78887 6667777888889999999999999999998766544433331111111 00 122222
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHHH------------hhchhhH
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSI-VCFLVTKTYVTSIT------------WFGLHGT 154 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~------------~~g~~~~ 154 (226)
........ +....+..........|.+|++.||++.|+.+..+.+ +..++|.+.+.+.+ ..||+..
T Consensus 352 ~~~~~~~~-G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~ 430 (467)
T PRK09556 352 YLASLFAL-GFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGT 430 (467)
T ss_pred HHHHHHHH-HHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHH
Confidence 22222222 2122222222235667999999999999999999887 66899999999988 5789888
Q ss_pred HHHHHHHHHHhh
Q psy10294 155 LFIYSFITGIGF 166 (226)
Q Consensus 155 ~~~~~~~~~i~~ 166 (226)
|++..+...++.
T Consensus 431 f~~~~~~~~~~~ 442 (467)
T PRK09556 431 FAALDIAAIGCI 442 (467)
T ss_pred HHHHHHHHHHHH
Confidence 887766666654
No 72
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.36 E-value=8.1e-12 Score=108.01 Aligned_cols=139 Identities=11% Similarity=0.002 Sum_probs=102.9
Q ss_pred cccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 13 RPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
....+.+.++++.+. ...+......+...+..++.|+++||+|||++++++..+..+..+.... ..+. ..
T Consensus 23 ~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~------~~~~---~~ 93 (393)
T PRK11195 23 LFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF------GIHP---LL 93 (393)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH------HHHH---HH
Confidence 344556677888776 5678888888999999999999999999999999999888773333222 0111 12
Q ss_pred HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q psy10294 92 FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFI 161 (226)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (226)
...+.+.......|....++.|++|+++|+++.++......++..++|.+.+.+.++. |+..+.+.+..
T Consensus 94 ~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~ 162 (393)
T PRK11195 94 AYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALI 162 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 2222333333455777789999999999999999999999999999999999988753 66555555443
No 73
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.35 E-value=2.6e-11 Score=105.53 Aligned_cols=151 Identities=8% Similarity=-0.037 Sum_probs=109.0
Q ss_pred ecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 12 MRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 12 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
..+..|.+.+++|.+. +..+..+...++..++++..+++.||+|||+.+..+..+.++......... ..+++..+.
T Consensus 22 ~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~---~~~~~~~~l 98 (410)
T TIGR00885 22 TNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAA---EIMNYTLFL 98 (410)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH---hhccHHHHH
Confidence 3477889989999998 778889999999999999999999999999999999988887433322200 112233222
Q ss_pred HHH-HHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH----------------------
Q psy10294 91 IFC-ICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT---------------------- 147 (226)
Q Consensus 91 ~~~-~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 147 (226)
... ..+.+.+. ..+....++.|..|+++|++..++.+....+|..+++.+.+.+..
T Consensus 99 ~~~~l~G~g~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 177 (410)
T TIGR00885 99 VGLFILTAGLGF-LETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAI 177 (410)
T ss_pred HHHHHHHhhHHH-HHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHH
Confidence 222 22222222 223344577789999999999999999999999999988776642
Q ss_pred ----hhchhhHHHHHHHHHHHhh
Q psy10294 148 ----WFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 148 ----~~g~~~~~~~~~~~~~i~~ 166 (226)
..+||.+|++.+.+..+..
T Consensus 178 ~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 178 KHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 2469999988887666543
No 74
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.34 E-value=1.5e-11 Score=106.90 Aligned_cols=150 Identities=13% Similarity=-0.014 Sum_probs=106.1
Q ss_pred eecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 11 SMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
....+.|.+.++ .|.+. ...+......++..++.++.+++.||.++|+.+..+..+..+..+.... ....+..
T Consensus 241 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~ 315 (417)
T PRK10489 241 AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGL-----MPMWILA 315 (417)
T ss_pred hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHc-----cchHHHH
Confidence 345677888887 78876 5667777888889999999999999988887777776665553322222 1122222
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.......+.+.+ ...+....++.|..|++.|+++.|+.+....++..+++.+.+.+.+..|.+..++..+....+..
T Consensus 316 ~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 392 (417)
T PRK10489 316 VLCLALFGYLSA-ISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIG 392 (417)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Confidence 222222222221 12244556888999999999999999999999999999999999999998877777776655544
No 75
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.34 E-value=8.2e-11 Score=99.94 Aligned_cols=150 Identities=12% Similarity=0.021 Sum_probs=106.2
Q ss_pred ccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 8 SFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
+..+..+.+|.+.+++|.+. +..+..+...++..++.++.|+++||+|||+.+..+.+...+..... . ..+.+
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~-----~~~~~ 88 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S-----APGTA 88 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H-----hccHH
Confidence 44566788999999999998 77888999999999999999999999999999998877665533222 2 12222
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--chhhHHHHHHHHHHH
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWF--GLHGTLFIYSFITGI 164 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~i 164 (226)
..+......+.+.+. ..+....++.|.+| ++|+++.++.+....++..+++.+.+.+.++. +||..+...+....+
T Consensus 89 ~l~~~~~~~g~g~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 89 LLFAGTALIGVGIAI-INVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHHHHH-HhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 222222222222222 22334456778886 57999999999998999999998888777664 388777766654443
Q ss_pred h
Q psy10294 165 G 165 (226)
Q Consensus 165 ~ 165 (226)
.
T Consensus 167 ~ 167 (355)
T TIGR00896 167 A 167 (355)
T ss_pred H
Confidence 3
No 76
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.34 E-value=7.8e-12 Score=108.60 Aligned_cols=156 Identities=13% Similarity=0.021 Sum_probs=108.6
Q ss_pred ceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 10 VSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
.......|.+.++.+.+. +.++......+...+++++.|+++||+|||+.+..+..+..+........... ..++...
T Consensus 34 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 112 (417)
T PRK10489 34 GLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL-PEPSLLA 112 (417)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc-CCCcHHH
Confidence 344566888888887776 67788889999999999999999999999999988777666522222110111 1222222
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+.......+.......+....++.|..|+++|+++.++......++..+++.+.+.+.+..+|++.++..+...++..
T Consensus 113 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~ 190 (417)
T PRK10489 113 IYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITL 190 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 222222222211112233445788999999999999999999999999999999999888899888877665555443
No 77
>KOG0569|consensus
Probab=99.34 E-value=6e-12 Score=110.38 Aligned_cols=132 Identities=15% Similarity=0.084 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHHh
Q psy10294 32 VLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWMLM 111 (226)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (226)
..++..++.++|++..++++||+|||..++++.+...+..+....+. ..+....+..-.++.+...........+|.
T Consensus 65 ~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~---~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 65 IVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSK---SAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46688889999999999999999999999888888777333333211 122333333333333322222234566899
Q ss_pred hccCCcchhhhHHHHHHHHHHHHHHHHHHH-HHHHHH-hhchhhHHHHHHHHHHHhh
Q psy10294 112 SEIFPVRIRGVACGICAAINSIVCFLVTKT-YVTSIT-WFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 112 ~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~g~~~~~~~~~~~~~i~~ 166 (226)
.|+.|.+.||....+...+..+|..++..+ .+.+.+ ...|++.+....+...+..
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l 198 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL 198 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH
Confidence 999999999999988888888888887443 333442 3348776666666555553
No 78
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.33 E-value=3.1e-11 Score=100.98 Aligned_cols=154 Identities=19% Similarity=0.190 Sum_probs=117.4
Q ss_pred cccceecccHHHHHhhc-CCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChH-HHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10294 7 SSFVSMRPYLVEIFQTF-GVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRP-MSLWSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~-~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
........+.|.+.++. |.+. +.........++..++.++.+++.||+|||+ .+..+..+..+....... ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~ 263 (352)
T cd06174 189 FGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL-----AP 263 (352)
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-----hc
Confidence 34455567788888775 7776 6677888889999999999999999999999 888887777774433333 12
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITG 163 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 163 (226)
+.+......... +.......+....+..|..|+++|++..++.+....++..+++.+.+.+.+..+|+..+.+.+.+..
T Consensus 264 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~ 342 (352)
T cd06174 264 SLALLLVALLLL-GFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALAL 342 (352)
T ss_pred cHHHHHHHHHHH-HHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHH
Confidence 222333333333 3333334567778899999999999999999999999999999999999988899988888888877
Q ss_pred Hhh
Q psy10294 164 IGF 166 (226)
Q Consensus 164 i~~ 166 (226)
+..
T Consensus 343 i~~ 345 (352)
T cd06174 343 LAA 345 (352)
T ss_pred HHH
Confidence 765
No 79
>PRK09952 shikimate transporter; Provisional
Probab=99.33 E-value=3.9e-11 Score=105.19 Aligned_cols=125 Identities=12% Similarity=0.043 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH--------HHHHHHHHHHHHhccccch
Q psy10294 35 LTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI--------PLTIFCICFWISGYGILAL 106 (226)
Q Consensus 35 ~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 106 (226)
...++..+++++.|+++||+|||+++..+..+..+....... .++.. .+...+.+.+....+..+.
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~ 145 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGL------LPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGG 145 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhc------CCcHHHHHHHHHHHHHHHHHHHHhhhcccHHH
Confidence 344556788999999999999999999988888874444333 11111 2333333333323233355
Q ss_pred hhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH--------HhhchhhHHHHHHHHHHHh
Q psy10294 107 PWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI--------TWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 107 ~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~i~ 165 (226)
...+++|.+|+++|++..+.......+|..++..+...+. ..+|||..|++.++..++.
T Consensus 146 ~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~ 212 (438)
T PRK09952 146 AALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA 212 (438)
T ss_pred HHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH
Confidence 5679999999999999999888888888877766655543 2579999888776655443
No 80
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.32 E-value=4e-11 Score=104.21 Aligned_cols=138 Identities=14% Similarity=0.163 Sum_probs=97.0
Q ss_pred ecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 12 MRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 12 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
+..++|.+.++.|.+. ..........++..++.++.+++.||+|||+.+..+.++..+....... . .........
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~ 325 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFR-I---PQDNYLLLG 325 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-H---ccccHHHHH
Confidence 4557788888888876 4455566777888999999999999999999988887766553332222 1 112222121
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHG 153 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 153 (226)
...........+..+..+.++.|.+|++.|+++.|+.+....+++.++|.+.+.+.+++|+..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~ 388 (426)
T PRK12307 326 ACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGA 388 (426)
T ss_pred HHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHH
Confidence 111111122223334555678899999999999999999999999999999999999888643
No 81
>KOG0253|consensus
Probab=99.31 E-value=1.6e-11 Score=103.01 Aligned_cols=129 Identities=14% Similarity=0.236 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhH
Q psy10294 30 EWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWM 109 (226)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (226)
..-..+.....++|.++.+++.||+|||+.+..+.+++.++.+....| ..........+....+...++ .+.|+
T Consensus 384 YrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c-----~~rn~~tvllf~arafisg~f-qvaYv 457 (528)
T KOG0253|consen 384 YRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTC-----KTRNAYTVLLFTARAFISGAF-QVAYV 457 (528)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHh-----cCcchhHHHHHHHHHHHhchh-eEEEE
Confidence 445667788889999999999999999999999999999987777773 344444444444444444444 46788
Q ss_pred HhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 110 LMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 110 ~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
|..|++|++.|+++.|.++..+++|+++.|.+. +.....-..+..+++...++..
T Consensus 458 YtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilag 512 (528)
T KOG0253|consen 458 YTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAG 512 (528)
T ss_pred ecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHH
Confidence 999999999999999999999999999999987 3332233446667777766665
No 82
>PRK15075 citrate-proton symporter; Provisional
Probab=99.31 E-value=8.1e-11 Score=102.94 Aligned_cols=145 Identities=14% Similarity=0.027 Sum_probs=92.8
Q ss_pred eecccHHHHHhhcCCCc-hHH-HHHHHH-----HHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSE-WVLVLT-----GVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~-~~~~~~-----~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
.+.+..|.+.++++.+. +.. +..+.. .+...+++++.|+++||+|||+.++.+..+..+....... ..
T Consensus 33 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~-----~~ 107 (434)
T PRK15075 33 LFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAF-----VP 107 (434)
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHh-----CC
Confidence 45677889999988766 432 222211 2222468899999999999999999998887774333333 11
Q ss_pred chHH-------HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH--------HHh
Q psy10294 84 PGWI-------PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTS--------ITW 148 (226)
Q Consensus 84 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 148 (226)
+... .+...+++.+.......+....+++|++|+++|+++.++......++..+++.+...+ .+.
T Consensus 108 ~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~ 187 (434)
T PRK15075 108 GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAE 187 (434)
T ss_pred cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc
Confidence 1110 1222222222222222344557899999999999999998887777776666655544 356
Q ss_pred hchhhHHHHHHH
Q psy10294 149 FGLHGTLFIYSF 160 (226)
Q Consensus 149 ~g~~~~~~~~~~ 160 (226)
+|||++|++...
T Consensus 188 ~gWr~~f~~~~~ 199 (434)
T PRK15075 188 WGWRIPFLIGCL 199 (434)
T ss_pred cchHHHHHHHHH
Confidence 799998876443
No 83
>PRK15075 citrate-proton symporter; Provisional
Probab=99.29 E-value=2.8e-11 Score=105.84 Aligned_cols=143 Identities=13% Similarity=0.136 Sum_probs=93.9
Q ss_pred cccceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy10294 7 SSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWP 84 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (226)
.+.+.+..|.|.++++ .|.+. +..+......+...++.++.|+++||+|||+.+..+.....+....... ... ...
T Consensus 252 ~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~-~~~-~~~ 329 (434)
T PRK15075 252 VSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS-WLV-AAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH-HHH-cCC
Confidence 3445667889998876 68886 5566677778888999999999999999999887765544332211111 010 112
Q ss_pred hHHHH-HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHHHhhchh
Q psy10294 85 GWIPL-TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSI-VCFLVTKTYVTSITWFGLH 152 (226)
Q Consensus 85 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~ 152 (226)
..... ........+.+ ...+..+.+.+|.+|++.|+++.++.+..+.. ++.++|.+.+.+.++.|++
T Consensus 330 ~~~~~~~~~~~~~~~~g-~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 330 SFARMLAVELWLSFLYG-SYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred chHHHHHHHHHHHHHHH-HHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 22111 11111222222 22344456788999999999999997666554 5788999999999988853
No 84
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.28 E-value=1.5e-10 Score=103.16 Aligned_cols=153 Identities=12% Similarity=-0.005 Sum_probs=100.9
Q ss_pred cccceecccHHHHH-hhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10294 7 SSFVSMRPYLVEIF-QTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNK-FGKRPMSLWSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~-~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
.+++.+..++|.+. +++|++. +..+.............+++|+++|| +|||+.++.+..+..+....... . ..
T Consensus 35 ~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~-~---~~ 110 (500)
T PRK09584 35 FGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAW-S---GH 110 (500)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH-h---cc
Confidence 34556667777777 5689887 55555544444444556789999999 59999999998887763333323 0 11
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRI--RGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFI 161 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (226)
............+.+.+ ...+....+.+|++|++. |+.+.++.+...++|..++|.+.+++.+++|||+.|.+.++.
T Consensus 111 ~~~~l~~~~~l~gig~g-~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~ 189 (500)
T PRK09584 111 DAGIVYMGMATIAVGNG-LFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVG 189 (500)
T ss_pred cHHHHHHHHHHHHHhhh-cccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 11112222222222222 233455568899998643 456788888999999999999999999999999998876654
Q ss_pred HHH
Q psy10294 162 TGI 164 (226)
Q Consensus 162 ~~i 164 (226)
..+
T Consensus 190 ~~i 192 (500)
T PRK09584 190 MLI 192 (500)
T ss_pred HHH
Confidence 333
No 85
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.28 E-value=6.4e-11 Score=103.30 Aligned_cols=149 Identities=15% Similarity=0.045 Sum_probs=100.1
Q ss_pred ccHHHHHhhcCCCc---------hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy10294 14 PYLVEIFQTFGVPL---------KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWP 84 (226)
Q Consensus 14 ~~~~~~~~~~g~~~---------~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (226)
.+.|.+.++.|.+. .......+..+..+++.+..+++.||+|||+++..+.++..+....... . ....
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~-~--~~~~ 305 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAY-G--DPEY 305 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-c--Ccch
Confidence 44555666655432 2245556677778888999999999999999999888877663222222 0 0111
Q ss_pred -hHHHHH-HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHh------hchhhHH
Q psy10294 85 -GWIPLT-IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICA-AINSIVCFLVTKTYVTSITW------FGLHGTL 155 (226)
Q Consensus 85 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~g~~~~~ 155 (226)
....+. .....+...+ ...+....+++|.+|++.|+++.|+.+ ....++..++|.+.+.+.++ +||+..|
T Consensus 306 ~~~~~l~l~~~l~g~~~~-~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f 384 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFD-FFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMW 384 (418)
T ss_pred hhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHH
Confidence 112122 2222222222 223445568899999999999999997 56788999999999999887 4588888
Q ss_pred HHHHHHHHHhh
Q psy10294 156 FIYSFITGIGF 166 (226)
Q Consensus 156 ~~~~~~~~i~~ 166 (226)
.+.+++..+..
T Consensus 385 ~~~~~~~~i~~ 395 (418)
T TIGR00889 385 LFFAGYIAILA 395 (418)
T ss_pred HHHHHHHHHHH
Confidence 88777777666
No 86
>KOG2532|consensus
Probab=99.28 E-value=3.1e-11 Score=106.26 Aligned_cols=139 Identities=13% Similarity=0.084 Sum_probs=111.0
Q ss_pred hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH--HHHHHHHHhhcCCCchHHHHHHHHHHHHH
Q psy10294 22 TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV--FTIALAICSMNLHWPGWIPLTIFCICFWI 98 (226)
Q Consensus 22 ~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (226)
+++++. +..+..+....+.+++.+.++++.||+|-|+++.++.++.++ ...+... ....+ .+...+++.+.
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa-----~~~~~-~~~~~R~lqGl 140 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAA-----SIGFY-LLLVLRFLQGL 140 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH-----Hhcch-hhHHHHHHhHH
Confidence 456666 677888899999999999999999999999999999999988 3334444 22223 34444444443
Q ss_pred HhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchhhHHHHHHHHHHHhh
Q psy10294 99 SGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW-FGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 99 ~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~i~~ 166 (226)
......|....+.+.+.|+++|++..++...+..+|.++..++.+.+.+. +||+..|++.+.+..+..
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~ 209 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWF 209 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHH
Confidence 33333466667888999999999999999999999999999999999988 999999999999988876
No 87
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.27 E-value=1.1e-10 Score=102.49 Aligned_cols=152 Identities=18% Similarity=0.175 Sum_probs=102.0
Q ss_pred cccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 13 RPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 13 ~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
.+..+.+.+ ++|++. +..+..++..+...+..+..|++.||+|.|+++.++..+..+..+.... ...+..+++..+.
T Consensus 54 ~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~-a~~~~~~s~~~ll 132 (462)
T PRK15034 54 SAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGI-AVQNPNTPFGIFI 132 (462)
T ss_pred HHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-HHcccCCCHHHHH
Confidence 344555555 689988 6777888888888899889999999999999999988888774333332 1111123344444
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH-----H-------------hhchh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI-----T-------------WFGLH 152 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-------------~~g~~ 152 (226)
....+.+..+. ..+.....+++++|+++||++.|+....+++|..+.+.+.+.+. + ..+|+
T Consensus 133 i~r~l~Gigg~-~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~ 211 (462)
T PRK15034 133 VIALLCGFAGA-NFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLA 211 (462)
T ss_pred HHHHHHHHHHH-hHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHH
Confidence 44443333332 33445568899999999999999998777777776666655433 2 23366
Q ss_pred hHHHHHHHHHHHhh
Q psy10294 153 GTLFIYSFITGIGF 166 (226)
Q Consensus 153 ~~~~~~~~~~~i~~ 166 (226)
...+++..+.++..
T Consensus 212 ~~~~~~~~~~iv~~ 225 (462)
T PRK15034 212 NAAWIWVPLLAIAT 225 (462)
T ss_pred HHHHHHHHHHHHHH
Confidence 66667776665554
No 88
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.27 E-value=3.9e-11 Score=105.02 Aligned_cols=152 Identities=16% Similarity=0.171 Sum_probs=99.3
Q ss_pred eecccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc--CChHHH-HHHHHHHHHHHHHHHHHhhcCCCch
Q psy10294 11 SMRPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF--GKRPMS-LWSTGICFVFTIALAICSMNLHWPG 85 (226)
Q Consensus 11 ~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~--Grr~~~-~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (226)
.+..|+|.+++ +.|++. +.........++..++.++.|+++||+ ++|+.. ........+....... . ....
T Consensus 261 ~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~--~--~~~~ 336 (434)
T PRK11663 261 AINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWL--M--PFAS 336 (434)
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHH--c--cccc
Confidence 34567888884 578887 566777788889999999999999999 333332 2222111111111111 1 1111
Q ss_pred HHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHh
Q psy10294 86 WIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 165 (226)
...........+....+........++|.+|++.|+++.|+.+....+++.++|.+.+++.++.||+..+...+.+.++.
T Consensus 337 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~ 416 (434)
T PRK11663 337 YVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGIS 416 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHH
Confidence 21111112211222222222334567899999999999999999999999999999999999999998888887777666
Q ss_pred h
Q psy10294 166 F 166 (226)
Q Consensus 166 ~ 166 (226)
.
T Consensus 417 ~ 417 (434)
T PRK11663 417 A 417 (434)
T ss_pred H
Confidence 5
No 89
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.26 E-value=1.3e-10 Score=100.61 Aligned_cols=151 Identities=9% Similarity=0.033 Sum_probs=104.9
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc-----CChH-HHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF-----GKRP-MSLWSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~-----Grr~-~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
....-+|.++++.|++. +..+....... .+..+++|+++||+ |||+ .+..+..+..+....... . . ..
T Consensus 17 ~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~-~-~-~~ 91 (402)
T PRK11902 17 LTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAF-C-P-PH 91 (402)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHh-c-C-cc
Confidence 34556889999999998 55655444443 58899999999999 8876 566666666554333333 1 1 11
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchhhHHHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW-FGLHGTLFIYSFIT 162 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~ 162 (226)
.+...+...............+....++.|.+|+++|+++.++......++..+++.+...+.+. .|||..|++.+.+.
T Consensus 92 ~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~ 171 (402)
T PRK11902 92 AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLM 171 (402)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHH
Confidence 22222332222223333334566677899999999999999999998899999999888888875 59999998888776
Q ss_pred HHhh
Q psy10294 163 GIGF 166 (226)
Q Consensus 163 ~i~~ 166 (226)
.+..
T Consensus 172 l~~~ 175 (402)
T PRK11902 172 LAGA 175 (402)
T ss_pred HHHH
Confidence 6554
No 90
>PTZ00207 hypothetical protein; Provisional
Probab=99.26 E-value=1.2e-10 Score=104.87 Aligned_cols=155 Identities=10% Similarity=0.053 Sum_probs=98.4
Q ss_pred cceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 9 FVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
.|.+..+.|.+.+++|++. +..+..... .......+++|++.||+|||+++.++.+...+..+....+.......+..
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~ 121 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVV 121 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHH
Confidence 4566788899999999987 545544432 23334566789999999999999999999888433333311100012233
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.+.+...+.+.......+.......++|| ++||++.|+......+|+.+.+.+...+.. .+|+..+++.+.+..+..
T Consensus 122 ~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ 198 (591)
T PTZ00207 122 RLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVG 198 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHH
Confidence 33333322222222222334456778887 789999999999999999865555554443 357777777777766655
No 91
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.26 E-value=8.5e-11 Score=101.34 Aligned_cols=149 Identities=14% Similarity=0.188 Sum_probs=102.9
Q ss_pred eecccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPLKSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
....+.|.+.++.|.+ +.........++..++.++.+++.||+|||+.+..+..+..+....... ..+.+....
T Consensus 234 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 307 (399)
T PRK05122 234 TIATFITLYYAARGWD-GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWL-----APSPWMALI 307 (399)
T ss_pred HHHHHHHHHHHHcccc-cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-----hccHHHHHH
Confidence 3445677777766653 3344556677778889999999999999999888777766653333333 122222222
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.....+.+.+. ..+.......|..|++.|+++.++.+....++..+++.+.+.+.++.||+..++..+.+..+..
T Consensus 308 ~~~l~G~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 382 (399)
T PRK05122 308 GAALTGFGFSL-VFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGL 382 (399)
T ss_pred HHHHHHHhHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 22222222222 2233345567889999999999999999999999999999999999999988888777666654
No 92
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.25 E-value=6.8e-11 Score=101.65 Aligned_cols=153 Identities=16% Similarity=0.103 Sum_probs=101.4
Q ss_pred ccccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHH-HHHHHHHHHHHHHhhcCCC
Q psy10294 6 NSSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWST-GICFVFTIALAICSMNLHW 83 (226)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~-~~~~i~~~~~~~~~~~~~~ 83 (226)
+.+.....+++|.+.+++|.+. +.++..+...+...+++++.++++||+|||....-.. +...+....... ..
T Consensus 17 ~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~ 91 (382)
T PRK11128 17 FFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWF-----GA 91 (382)
T ss_pred HHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHH-----hc
Confidence 4445667788899999999988 7788888999999999999999999999953221111 111111111111 11
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITG 163 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 163 (226)
++...+.......+.......+....+..++ .++|+++.+.....+.++..++|.+.+.+.+++|||..++..+....
T Consensus 92 ~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~ 169 (382)
T PRK11128 92 HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVA 169 (382)
T ss_pred ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 2233322233322222333445555566555 45688888889999999999999999999999999998887665444
Q ss_pred Hh
Q psy10294 164 IG 165 (226)
Q Consensus 164 i~ 165 (226)
+.
T Consensus 170 ~~ 171 (382)
T PRK11128 170 SM 171 (382)
T ss_pred HH
Confidence 33
No 93
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.25 E-value=1.8e-10 Score=99.55 Aligned_cols=152 Identities=13% Similarity=0.034 Sum_probs=103.1
Q ss_pred ccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 8 SFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
+.+....|.|.+.++.|.+. +.........++.+++.++.+++.||+|||+....+..+..+....... . .....
T Consensus 220 ~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~-~---~~~~~ 295 (393)
T PRK09705 220 GYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIW-L---PLQLP 295 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH-c---cchHH
Confidence 34456678899998888887 5677788889999999999999999999999888876666553322222 0 11111
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHHHH
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIF-PVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTLFIYSFITGI 164 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~i 164 (226)
... ....+.+.+. ..+.......|.. |+++|++..|+.+..+.+++.++|.+.+++.++.| +...+.+......+
T Consensus 296 ~~~--~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~ 372 (393)
T PRK09705 296 VLW--AMVCGLGLGG-AFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVG 372 (393)
T ss_pred HHH--HHHHHHhccc-hHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 111 1122222222 2233444445666 46789999999999999999999999999999887 55555555555544
Q ss_pred hh
Q psy10294 165 GF 166 (226)
Q Consensus 165 ~~ 166 (226)
..
T Consensus 373 ~~ 374 (393)
T PRK09705 373 LM 374 (393)
T ss_pred HH
Confidence 44
No 94
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.25 E-value=1.1e-10 Score=100.75 Aligned_cols=136 Identities=14% Similarity=0.077 Sum_probs=97.7
Q ss_pred ceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 10 VSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
+....|.|.+.++.|.+. +.........++..++.++.+++.||+|||+.+..+.+...+....... ....+..
T Consensus 237 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 311 (406)
T PRK11551 237 YFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA-----APSFAGM 311 (406)
T ss_pred HHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-----cCcHHHH
Confidence 344557888888888887 6667777888889999999999999999999887765555443322222 1222222
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGL 151 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 151 (226)
. ......+....+..+..+.+.+|.+|+++|+++.|+.+....+++.++|.+.+.+.++.++
T Consensus 312 ~-~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~ 373 (406)
T PRK11551 312 L-LAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRS 373 (406)
T ss_pred H-HHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCc
Confidence 2 2222222222234456667889999999999999999999999999999999998876543
No 95
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.24 E-value=2.8e-10 Score=97.54 Aligned_cols=138 Identities=15% Similarity=0.108 Sum_probs=97.4
Q ss_pred cccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 13 RPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 13 ~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
..+.|.+.+ +.|.+. +..+......++..++.++.+++.||+|||+.+..+.....+..+.... . ....+. +.
T Consensus 258 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~-~~ 332 (405)
T TIGR00891 258 QDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFA-I---GANVAV-LG 332 (405)
T ss_pred hhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHH-h---CCchHH-HH
Confidence 345666664 578876 5667777888899999999999999999999988777665442222222 1 122222 22
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHH
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTL 155 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~ 155 (226)
...........+..+..+.+++|.+|++.|+++.|+.+....+++.++|.+.+.+.++.| |+..+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~ 398 (405)
T TIGR00891 333 LGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTAL 398 (405)
T ss_pred HHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhH
Confidence 221222222333445566788999999999999999999999999999999999999988 65433
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.23 E-value=1.6e-10 Score=100.89 Aligned_cols=135 Identities=7% Similarity=-0.024 Sum_probs=103.1
Q ss_pred cccHHHHHhhcCCCc-h-HHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 13 RPYLVEIFQTFGVPL-K-SEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~-~-~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
.+..|.+.+++|++. + .+.+......++.+..+++|+++||+|-|+++..+.+...+......+ ..+...+.
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f------a~Sl~~L~ 119 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL------GTSVWHMQ 119 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH------HHHHHHHH
Confidence 345677778899998 5 567888999999999999999999999999999999888884443333 12233333
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHH
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTL 155 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 155 (226)
...++.+....... ....++.+++|+++|+++.|+...+..+|.++++.+.+. ...+||+...
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~ 182 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYS 182 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHH
Confidence 33333333322222 566789999999999999999999999999999999998 5678998643
No 97
>PRK12382 putative transporter; Provisional
Probab=99.23 E-value=1.7e-10 Score=99.28 Aligned_cols=150 Identities=16% Similarity=0.138 Sum_probs=104.7
Q ss_pred ceecccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 10 VSMRPYLVEIFQTFGVPLKSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
..+..+.|.++++.+.+ +.........++..++.+..+++.||+|||+.+..+..+..+....... ..+.+...
T Consensus 233 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 306 (392)
T PRK12382 233 AVIGTFVSLYFASKGWA-MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWL-----APTAWVAL 306 (392)
T ss_pred hHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHH-----cccHHHHH
Confidence 34456677777776665 3344455566677889999999999999999988877766663333323 12222222
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
......+.+.+. ..+.......|.+|+++|+++.|+.+....++..+++.+.+.+.++.||+..+...+.+.++..
T Consensus 307 ~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 382 (392)
T PRK12382 307 AGAALTGAGCSL-IFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGI 382 (392)
T ss_pred HHHHHHHHHHHh-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 222222222221 2344445677889999999999999999999999999999999999999998888877766654
No 98
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.23 E-value=1.3e-10 Score=101.54 Aligned_cols=154 Identities=12% Similarity=0.232 Sum_probs=90.5
Q ss_pred ccceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCch
Q psy10294 8 SFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPG 85 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (226)
..+.+..|+|.++++ .|.+. +......+..+...++.++.|+++||+|||+.+.++..+..+....... ........
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 336 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILS-ALQNVSSP 336 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH-HHHcCCcH
Confidence 345567788988764 68876 4555566666777888889999999999999887766554332222211 11111122
Q ss_pred HHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHHHhhchhh-HHHHHHHHHH
Q psy10294 86 WIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSI-VCFLVTKTYVTSITWFGLHG-TLFIYSFITG 163 (226)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~ 163 (226)
...+..........+. ..+..+.+.+|.+|++.|+++.|+.+..++. .+...|.+...+ +..|++. .++..+....
T Consensus 337 ~~~~~~~~~~~~~~~~-~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~ 414 (432)
T PRK10406 337 YAAFGLVMCALLIVSF-YTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAV 414 (432)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHH
Confidence 2222212111111111 2234567889999999999999999987765 344566666644 5556433 3333333333
Q ss_pred H
Q psy10294 164 I 164 (226)
Q Consensus 164 i 164 (226)
+
T Consensus 415 i 415 (432)
T PRK10406 415 V 415 (432)
T ss_pred H
Confidence 3
No 99
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.23 E-value=2.4e-10 Score=98.23 Aligned_cols=136 Identities=11% Similarity=-0.013 Sum_probs=99.6
Q ss_pred ccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 8 SFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
+.....+++|.+.+++|.+. +.++..+...++..+++++.|+++||+|||+.+..+..+..+....... .++.
T Consensus 21 ~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~------~~~~ 94 (381)
T PRK03633 21 AIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL------MVGF 94 (381)
T ss_pred hhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hccH
Confidence 34456788999999999987 7788999999999999999999999999999999888887773333333 1223
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWF 149 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (226)
..+.......+.......+.......|..|+++|+++.+.......+|..+++.+.+.+.+..
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 95 WSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 333333333222222223333345568889999999999999999999999999988776643
No 100
>KOG0254|consensus
Probab=99.22 E-value=1.3e-10 Score=103.98 Aligned_cols=130 Identities=20% Similarity=0.184 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhH
Q psy10294 30 EWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWM 109 (226)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (226)
.+..+...+++.+++++.|.++|++|||+.++.+.+...+..+.... ..+...+...+.+.+....+...+..+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~------a~~~~~l~~GR~l~G~g~G~~~~~~pi 165 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIAL------APSWYQLIVGRILTGLGVGGASVLAPV 165 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH------hhhHHHHHHHHHHhccchhhhhhcchh
Confidence 58889999999999999999999999999999999998884444343 123333333333222222223345668
Q ss_pred HhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--hchhhHHHHHHHHHHHhh
Q psy10294 110 LMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW--FGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 110 ~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~i~~ 166 (226)
|.+|+.|++.||...+..+....+|..++ .+.+....+ ++||..+.+..+.+.+..
T Consensus 166 y~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~ 223 (513)
T KOG0254|consen 166 YISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILA 223 (513)
T ss_pred hHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888766666 444444443 489977777776666665
No 101
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.22 E-value=2.5e-10 Score=98.52 Aligned_cols=149 Identities=10% Similarity=-0.023 Sum_probs=91.9
Q ss_pred eecccHHHHH-hhcCCCc-hHHHHHHHHHH-HHHHHHHHHHHHhcccCChHHHHH-HHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 11 SMRPYLVEIF-QTFGVPL-KSEWVLVLTGV-LAITGSLVSSLTVNKFGKRPMSLW-STGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 11 ~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~-~~~~~~~~~~~l~d~~Grr~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
.+.+++|.+. +++|.+. +.++..+...+ ....+.+.+++ .||+|||+.++. +.+...+....... ..+.
T Consensus 33 ~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~------~~~~ 105 (393)
T PRK15011 33 LQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAW------NRNY 105 (393)
T ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHH------hhHH
Confidence 3456666654 5689887 55665444444 45556666666 999999987554 44433332222222 1222
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhh--hHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRG--VACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGI 164 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 164 (226)
..+........+.+....+....+..|..|++.|. ...++.+....++..+++.+.+.+.+++|||..|+..+...++
T Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~ 185 (393)
T PRK15011 106 FVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIV 185 (393)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 22222222222333334455556677766666553 3346777888899999999999999999999999888777666
Q ss_pred hh
Q psy10294 165 GF 166 (226)
Q Consensus 165 ~~ 166 (226)
..
T Consensus 186 ~~ 187 (393)
T PRK15011 186 CG 187 (393)
T ss_pred HH
Confidence 55
No 102
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.22 E-value=2.3e-10 Score=100.60 Aligned_cols=153 Identities=16% Similarity=0.187 Sum_probs=96.7
Q ss_pred ceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc--CChHHHHH-HHHHHHHHHHHHHHHhhcCCCc
Q psy10294 10 VSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF--GKRPMSLW-STGICFVFTIALAICSMNLHWP 84 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~--Grr~~~~~-~~~~~~i~~~~~~~~~~~~~~~ 84 (226)
+....|.|.++++ .|++. +.........+...++.++.|+++||+ |||....+ ...+..+....... .....
T Consensus 270 ~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~---~~~~~ 346 (452)
T PRK11273 270 YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWL---NPAGN 346 (452)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHH---hcccC
Confidence 4566789999876 67876 556666777788889999999999999 55543322 11211111111111 10111
Q ss_pred hHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHhhchhhHHHHHHHHHH
Q psy10294 85 GWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFL-VTKTYVTSITWFGLHGTLFIYSFITG 163 (226)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 163 (226)
...........+ ....+.......+..|.+|++.||++.|+.+....+++.+ +|.+.+.+.+++||+..|++......
T Consensus 347 ~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~ 425 (452)
T PRK11273 347 PTVDMACMIVIG-FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSI 425 (452)
T ss_pred hHHHHHHHHHHH-HHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHH
Confidence 111111111111 1111222223346779999999999999999888887665 78999999999999988887777666
Q ss_pred Hhh
Q psy10294 164 IGF 166 (226)
Q Consensus 164 i~~ 166 (226)
++.
T Consensus 426 ~~~ 428 (452)
T PRK11273 426 LAV 428 (452)
T ss_pred HHH
Confidence 554
No 103
>PRK09952 shikimate transporter; Provisional
Probab=99.22 E-value=5.1e-10 Score=98.12 Aligned_cols=157 Identities=13% Similarity=0.146 Sum_probs=96.9
Q ss_pred ccceecccHHHHHh-hcCCCch-HHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCch
Q psy10294 8 SFVSMRPYLVEIFQ-TFGVPLK-SEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPG 85 (226)
Q Consensus 8 ~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (226)
+.+....|.|.+.+ ++|.+.+ .........+...++.++.|+++||+|||+.+..+.++..+....... ........
T Consensus 265 ~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 343 (438)
T PRK09952 265 TMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFM-ALEAQSIF 343 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HHHcCChH
Confidence 44555667777765 4677652 223344556667788899999999999999988776655443222222 11111112
Q ss_pred HHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHH-HHHHHHHHHHHHHHHhh--chhhHHHHHHHHH
Q psy10294 86 WIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINS-IVCFLVTKTYVTSITWF--GLHGTLFIYSFIT 162 (226)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~ 162 (226)
............+.+ ...+..+.+++|.+|++.|+++.++.+..+. +++.++|.+.+++.+.. +|+..+...++..
T Consensus 344 ~~~~~~~~l~~~~~~-~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 422 (438)
T PRK09952 344 WIVFFSIMLANIAHD-MVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGC 422 (438)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 221211222122222 2234566789999999999999999776655 78899999999988754 3665555555554
Q ss_pred HHhh
Q psy10294 163 GIGF 166 (226)
Q Consensus 163 ~i~~ 166 (226)
++..
T Consensus 423 ~i~~ 426 (438)
T PRK09952 423 LISA 426 (438)
T ss_pred HHHH
Confidence 4443
No 104
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.21 E-value=5.1e-10 Score=96.91 Aligned_cols=157 Identities=16% Similarity=0.190 Sum_probs=102.9
Q ss_pred cccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHH-HHHHHHHHHHHHHHHHhhcCCCc
Q psy10294 7 SSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSL-WSTGICFVFTIALAICSMNLHWP 84 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~-~~~~~~~i~~~~~~~~~~~~~~~ 84 (226)
.+.+....|.|.+.++.|.+. +.........++..++.+..|+++||+|||+... .+.....+.............+.
T Consensus 236 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 315 (402)
T TIGR00897 236 IGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHS 315 (402)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 344566778999998888887 5556667778889999999999999999988764 22222322212211100000112
Q ss_pred hHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q psy10294 85 GWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGI 164 (226)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 164 (226)
.+.........+.+.+ +..+.. ...+|..| ++|+++.|+.+....+++.++|.+.+.+.+..|+...+++.+++.++
T Consensus 316 ~~~~~~~~~~~G~~~~-~~~~~~-~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i 392 (402)
T TIGR00897 316 FAVALIIAIALGIFLA-GYVPLA-AVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVV 392 (402)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHH-HHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Confidence 2222222222222222 223332 35567655 58999999999999999999999999999999998888888777666
Q ss_pred hh
Q psy10294 165 GF 166 (226)
Q Consensus 165 ~~ 166 (226)
..
T Consensus 393 ~~ 394 (402)
T TIGR00897 393 SA 394 (402)
T ss_pred HH
Confidence 54
No 105
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.21 E-value=4.4e-11 Score=104.73 Aligned_cols=156 Identities=17% Similarity=0.169 Sum_probs=97.3
Q ss_pred ceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 10 VSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
+....|.|.++++ .|.+. +..+......+..+++.+++++++||+++|+....+......................+.
T Consensus 268 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T TIGR00712 268 YGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLV 347 (438)
T ss_pred HHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHH
Confidence 4566788988876 57776 566777788888999999999999999654322223222222111111101111111222
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHH-HHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVC-FLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
........ +....+..........|.+|++.|+++.|+.+....+++ .++|.+.+.+.++.||...+.+......++.
T Consensus 348 ~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~ 426 (438)
T TIGR00712 348 DMICMIVI-GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAV 426 (438)
T ss_pred HHHHHHHH-HHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHH
Confidence 11111111 111112222223456799999999999999998888775 6789999999999999888877777666655
No 106
>TIGR00898 2A0119 cation transport protein.
Probab=99.21 E-value=1.5e-10 Score=102.92 Aligned_cols=131 Identities=12% Similarity=0.188 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHHHHHHHHHhccccchh
Q psy10294 29 SEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWP-GWIPLTIFCICFWISGYGILALP 107 (226)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 107 (226)
.........+..+++.++.+++.||+|||+.+.++.++..+..+.... . ... .+...........+. .+..+..
T Consensus 357 ~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~-~---~~~~~~~~~~~~~~~~~~~-~~~~~~~ 431 (505)
T TIGR00898 357 IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLF-V---PVDLYFLRTALAVLGKFGI-TSAFQMV 431 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-c---CCCchHHHHHHHHHHHHHH-HHHHHHH
Confidence 344455667778889999999999999999999888877774433333 1 112 122222222222222 2233566
Q ss_pred hHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 108 WMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 108 ~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+.+.+|.+|++.|+++.|+.+....+++.++|.+.+ + ...++..++++++....+..
T Consensus 432 ~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~ 488 (505)
T TIGR00898 432 YLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAG 488 (505)
T ss_pred HHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999888 3 34455667777777666654
No 107
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.21 E-value=2.1e-10 Score=97.73 Aligned_cols=152 Identities=14% Similarity=0.015 Sum_probs=93.7
Q ss_pred ceecccHHHHHhhcCC--Cc-hHHHHHH-----HHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcC
Q psy10294 10 VSMRPYLVEIFQTFGV--PL-KSEWVLV-----LTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNL 81 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~--~~-~~~~~~~-----~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 81 (226)
+.+.+..+.+.++... ++ ....... ...+...+++++.|+++||+|||+++..+..+..+....... .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~--- 85 (394)
T TIGR00883 10 YLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGL-L--- 85 (394)
T ss_pred HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh-C---
Confidence 3444556666666433 22 2222222 222333568899999999999999999988887774333333 0
Q ss_pred CCchH------HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH--------H
Q psy10294 82 HWPGW------IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI--------T 147 (226)
Q Consensus 82 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 147 (226)
.+... ..+.......+.......+....+++|.+|+++|++..++......+|..+++.+...+. +
T Consensus 86 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~ 165 (394)
T TIGR00883 86 PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALL 165 (394)
T ss_pred CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhh
Confidence 11110 112222222222222233455678999999999999999999888888888887765543 3
Q ss_pred hhchhhHHHHHHHHHHHh
Q psy10294 148 WFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 148 ~~g~~~~~~~~~~~~~i~ 165 (226)
.++||..+++.+.+..+.
T Consensus 166 ~~~w~~~~~~~~~~~~~~ 183 (394)
T TIGR00883 166 EWGWRIPFLVSAVLVLIG 183 (394)
T ss_pred ccchHHHHHHHHHHHHHH
Confidence 568998887766655544
No 108
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.20 E-value=2.1e-10 Score=97.71 Aligned_cols=151 Identities=16% Similarity=0.182 Sum_probs=97.9
Q ss_pred cceecccHHHHH-hhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 9 FVSMRPYLVEIF-QTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 9 ~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
.+....+.|.+. ++.|.+. +.........+...++.++.++++||+|||+.+.....+..+....... ......+.+
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 313 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLM-ALLDSGSFT 313 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH-HHhcCCchH
Confidence 344556788887 4577776 5566677778888999999999999999999877655544442211111 111112222
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHH
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICA-AINSIVCFLVTKTYVTSITWFG-LHGTLFIYSFI 161 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~ 161 (226)
...........+.+ ...+....+++|.+|++.|+++.++.+ ....+++.++|.+.+.+.++.| |+..++.....
T Consensus 314 ~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 314 LFFFLVLGLALIGG-MYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred HHHHHHHHHHHHHH-HHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 22222222222222 233556678899999999999999854 4456788899999999999888 76655544443
No 109
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.20 E-value=1.6e-10 Score=99.35 Aligned_cols=147 Identities=13% Similarity=0.069 Sum_probs=99.6
Q ss_pred ccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHH-HHHHHHHHHhhcCCCch
Q psy10294 8 SFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICF-VFTIALAICSMNLHWPG 85 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~-i~~~~~~~~~~~~~~~~ 85 (226)
+.....+++|.+.+++|.+. +.++..+...+...+++++.++++||+|||........+.. +....... ..++
T Consensus 19 ~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~ 93 (382)
T TIGR00902 19 AYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSA-----GAHN 93 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH-----hhhh
Confidence 33456688899999999988 77888888899999999999999999998654432222221 11111111 1122
Q ss_pred HHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q psy10294 86 WIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFI 161 (226)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (226)
...+...............+....+..|. +++|++..|.....+.+|..+++.+.+.+.+++|||..+++....
T Consensus 94 ~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 94 AWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 22222223222222223345555565543 577899999999999999999999999999999999988776554
No 110
>PRK10133 L-fucose transporter; Provisional
Probab=99.20 E-value=6.7e-10 Score=97.49 Aligned_cols=131 Identities=6% Similarity=-0.084 Sum_probs=92.6
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
....+.|.+.+++|.+. +.++......++..+++++.|++.||+|||+++..+..+..+..+...... ..+++..+
T Consensus 44 ~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~---~a~~~~~l 120 (438)
T PRK10133 44 LNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAA---EIMNYTLF 120 (438)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH---hcCCHHHH
Confidence 34567889988899998 778888999999999999999999999999999999988888433321100 12333333
Q ss_pred HHHHHH-HHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 90 TIFCIC-FWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTS 145 (226)
Q Consensus 90 ~~~~~~-~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (226)
...... +.+.+. ..+....++.|..|+++|....++.+....+|..+++.+...+
T Consensus 121 l~~r~l~G~g~g~-~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 121 LVGLFIIAAGLGC-LETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHH-HHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333332 222222 3344455677887777777788888888888888888776543
No 111
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.19 E-value=4.6e-10 Score=96.91 Aligned_cols=147 Identities=10% Similarity=0.088 Sum_probs=96.9
Q ss_pred cccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 13 RPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 13 ~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
..+.|.+.+ ++|.+. +............+++.++.|+++||+|||+.+..+.....+....... ..+.+..+.
T Consensus 236 ~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~ 310 (393)
T PRK15011 236 IINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLM-----AHSPAILLG 310 (393)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-----HhhHHHHHH
Confidence 345777665 468876 4555555556667888999999999999999877665554442222222 112222222
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.........+.. .+....+..|.+|++ |+++.++.+....++..+++.+.+.+.+++||+..+++...+..+..
T Consensus 311 ~~~l~~~~~g~~-~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~ 384 (393)
T PRK15011 311 LQLLNAIYIGIL-GGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATL 384 (393)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 222222222221 123345678999865 99999999888899999999999999999999888877666665554
No 112
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.19 E-value=1.5e-10 Score=103.96 Aligned_cols=145 Identities=16% Similarity=0.119 Sum_probs=103.8
Q ss_pred cHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHH
Q psy10294 15 YLVEIFQTFGVPLKSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCI 94 (226)
Q Consensus 15 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (226)
-++.+.++.|-+++..|......+...++.++.|.++|.||||..++.+.++..+..+.... .++.........+
T Consensus 66 ~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at-----A~~~~~~iag~~l 140 (599)
T PF06609_consen 66 ILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT-----AQNMNTFIAGMVL 140 (599)
T ss_pred HHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc-----CCcHHHHHHHHHH
Confidence 35677888888777788888889999999999999999999999999999888883333333 1233333333334
Q ss_pred HHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 95 CFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.+.+ .|........++|+.|.|.|..+.++...........++.+...+..+-+|||.+++..++..+..
T Consensus 141 ~Gvg--aG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~ 210 (599)
T PF06609_consen 141 YGVG--AGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIAL 210 (599)
T ss_pred HHHh--hHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 3333 344444556689999999999888776655444444566666655556789999998888776665
No 113
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.18 E-value=1.9e-10 Score=100.11 Aligned_cols=132 Identities=12% Similarity=0.047 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhh
Q psy10294 29 SEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPW 108 (226)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (226)
.+.......+...++.++++++.||+|||+.+..+..+..+....... ..+.+.............+ ...+...
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~~~~~~l~g~~~~-~~~~~~~ 337 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF-----ATGPLEVSILKLLHAFEVP-FLLVGVF 337 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh-----cccHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 345566677778899999999999999999988777766663333222 1222322222222222211 1123344
Q ss_pred HHhhccCCcchhhhHHHH-HHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 109 MLMSEIFPVRIRGVACGI-CAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 109 ~~~~e~~p~~~R~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.+++|.+|++.|++..+. .+....++..+++.+.+++.+.+||+..|...+.+..+..
T Consensus 338 ~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~ 396 (420)
T PRK09528 338 KYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFT 396 (420)
T ss_pred HHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHH
Confidence 677899999999988765 4566789999999999999999999998888877776654
No 114
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.18 E-value=3.6e-10 Score=95.91 Aligned_cols=156 Identities=13% Similarity=0.189 Sum_probs=102.5
Q ss_pred cceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHH--HHHHHHHHHH-HHHHHHHHhhcCCC
Q psy10294 9 FVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPM--SLWSTGICFV-FTIALAICSMNLHW 83 (226)
Q Consensus 9 ~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~--~~~~~~~~~i-~~~~~~~~~~~~~~ 83 (226)
...+..+.|.+.++ .|.+. +..+......+...++.++.++++||+|||+. .......... ....... ...+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 309 (399)
T TIGR00893 231 LGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLM-FATNYV 309 (399)
T ss_pred HHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH-HHhccc
Confidence 33455677777754 67776 56677778888899999999999999999962 1111111111 1111111 000111
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTLFIYSFIT 162 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~ 162 (226)
....... ......+.+.+..+..+.+.+|.+|++.|+++.++.+....+++.+++.+.+.+.+..| |+..++..+.+.
T Consensus 310 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~ 388 (399)
T TIGR00893 310 NIPYAAL-ALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALA 388 (399)
T ss_pred hhHHHHH-HHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHH
Confidence 1222222 22222233333567778899999999999999999999999999999999999999888 888777777666
Q ss_pred HHhh
Q psy10294 163 GIGF 166 (226)
Q Consensus 163 ~i~~ 166 (226)
.+..
T Consensus 389 ~~~~ 392 (399)
T TIGR00893 389 LIGA 392 (399)
T ss_pred HHHH
Confidence 5554
No 115
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.18 E-value=1.1e-10 Score=99.25 Aligned_cols=147 Identities=19% Similarity=0.254 Sum_probs=111.7
Q ss_pred cccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH-HH-HHHHHHhhcCCCchHHHH
Q psy10294 13 RPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV-FT-IALAICSMNLHWPGWIPL 89 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i-~~-~~~~~~~~~~~~~~~~~~ 89 (226)
....+.+.+++|++. |..+...+..+...+.-++.|++.||||-|+....+.++..+ +. ..... ..+++..+
T Consensus 34 s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~-----~~~~~~~l 108 (417)
T COG2223 34 SPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAV-----TYPSTWQL 108 (417)
T ss_pred HHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHc-----cCCchHHH
Confidence 344556668899998 778888899999999999999999999999999999988877 32 22222 23333333
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---hhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG---LHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~i~~ 166 (226)
..+.++.+..+ +.-++...+++++||++++|.+.|+.. .+++|..+...+.|.+....+ |+....++.....+..
T Consensus 109 l~~gll~G~~G-asFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~ 186 (417)
T COG2223 109 LVIGLLLGLAG-ASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAA 186 (417)
T ss_pred HHHHHHHhccc-ceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 33333333322 233445568999999999999999999 899999999999999999999 8888888877777765
No 116
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.17 E-value=2.2e-10 Score=99.66 Aligned_cols=149 Identities=15% Similarity=0.124 Sum_probs=97.7
Q ss_pred cccceecccHHHHHhhc--CCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHH-HHHHHHHHHHHHHHHHHhhcCC
Q psy10294 7 SSFVSMRPYLVEIFQTF--GVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMS-LWSTGICFVFTIALAICSMNLH 82 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~-~~~~~~~~i~~~~~~~~~~~~~ 82 (226)
.+.+.+..|+|.++++. +.+. +.........+...++.++.++++||++||+.. ........+. +.... . .
T Consensus 256 ~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~-~~~~~--~--~ 330 (412)
T TIGR02332 256 NTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAG-WLLAS--A--T 330 (412)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHH-HHHHH--h--c
Confidence 34556678999999885 4554 556677888888999999999999999987753 3333232222 11111 1 1
Q ss_pred CchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHH
Q psy10294 83 WPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTLFIYSFI 161 (226)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~ 161 (226)
...............+. ....+..+....|.+|++.|+++.|+.+....+++.++|.+.+.+.+..| |+..++..+++
T Consensus 331 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 331 DHNLIQLLGIIMASMGS-FSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred CCHHHHHHHHHHHHHHh-hhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 11222221111111111 11223344566788999999999999999999999999999999888775 88777665554
No 117
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.17 E-value=9.5e-11 Score=103.28 Aligned_cols=151 Identities=11% Similarity=-0.021 Sum_probs=99.8
Q ss_pred ceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc--CChHHHHHHH--HHHHHHHHHHHHHhhcCCCc
Q psy10294 10 VSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF--GKRPMSLWST--GICFVFTIALAICSMNLHWP 84 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~--Grr~~~~~~~--~~~~i~~~~~~~~~~~~~~~ 84 (226)
+....++|.+.++.|.+. +......+.+++.+++.++.++++||. ++|+....+. ....+..+.... ..+
T Consensus 258 ~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~-----~~~ 332 (455)
T TIGR00892 258 FAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL-----AGD 332 (455)
T ss_pred cchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH-----hch
Confidence 344557788888888887 666777788888899999999999974 3343333322 222221111111 122
Q ss_pred hHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHHH
Q psy10294 85 GWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTLFIYSFITG 163 (226)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~ 163 (226)
.+.........+.+. ....+..+.++.|.+|+++|+++.|+.+....+++.++|.+.+.+.+..+ |+..|++.+++.+
T Consensus 333 ~~~~~i~~~~~G~~~-g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~l 411 (455)
T TIGR00892 333 YTGLVIYCIFFGLSF-GSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVV 411 (455)
T ss_pred HHHHHHHHHHHHHHh-chHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHH
Confidence 222222222222222 22335556778899999999999999999999999999999999888774 8888887777665
Q ss_pred Hhh
Q psy10294 164 IGF 166 (226)
Q Consensus 164 i~~ 166 (226)
+..
T Consensus 412 i~~ 414 (455)
T TIGR00892 412 SAG 414 (455)
T ss_pred HHH
Confidence 554
No 118
>KOG2615|consensus
Probab=99.16 E-value=1e-10 Score=98.42 Aligned_cols=111 Identities=10% Similarity=0.032 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhH
Q psy10294 30 EWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWM 109 (226)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (226)
+...+.+++.+.+.++.+|.++||+|||++++.+....++....... +.+...++.-.+.. +..-+...+.-+
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~------S~~F~afv~aR~l~-Gi~kgnl~v~rA 143 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL------SRNFAAFVLARFLG-GIFKGNLSVIRA 143 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhh-hhccCchHHHHH
Confidence 56677889999999999999999999999999998888884433333 23333333324433 444455567778
Q ss_pred HhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 110 LMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT 147 (226)
Q Consensus 110 ~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (226)
+++|+.+++.|+.+++.......+|-+++|.+++++..
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 99999999999999999999999999999999999877
No 119
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.16 E-value=2.1e-13 Score=119.36 Aligned_cols=132 Identities=16% Similarity=0.136 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHhccccchhh
Q psy10294 30 EWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHW-PGWIPLTIFCICFWISGYGILALPW 108 (226)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (226)
.+......++..+|++++|+++||+|||+.++.+..+..+..+.... . .. .+...+.....+.+....+..+...
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~-~---~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAF-A---PSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHhhhcccccccccccccccccccccccccccccccccccc-c---cccccccccccccccccccccccccccc
Confidence 46677888899999999999999999999999988888774333333 0 10 1333333333333332223345677
Q ss_pred HHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH---hhchhhHHHHHHHHHHHh
Q psy10294 109 MLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT---WFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 109 ~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~i~ 165 (226)
+++.|..|+++|++..++.+....+|..++..+.....+ ..+||..+....+..++.
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~ 184 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV 184 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 899999999999999998888877777776655443322 235887766666665554
No 120
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.15 E-value=4.3e-10 Score=100.13 Aligned_cols=151 Identities=11% Similarity=0.083 Sum_probs=100.4
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc-----CChHHHH-HHHHHHHHHHHHHHHHhhcCCC
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF-----GKRPMSL-WSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~-----Grr~~~~-~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
.....+|.+.++.|.+. +.... ...... .++.+++++++||+ |||+..+ .+.+...+....... . . ..
T Consensus 30 ~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~-~-~-~~ 104 (491)
T PRK11010 30 LTSGTLQAWMTVENIDLKTIGFF-SLVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGF-L-E-PG 104 (491)
T ss_pred HHHHHHHHHHHhCCCCHHHHHHH-HHHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHH-c-C-Cc
Confidence 33445778888888876 33433 222222 26889999999999 9998654 444444443333323 1 1 11
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hhchhhHHHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT-WFGLHGTLFIYSFIT 162 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~ 162 (226)
.+...+...............+....+..|++|+++|+++.++......+|..+++.+...+.+ ..|||..|++.+.+.
T Consensus 105 ~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ 184 (491)
T PRK11010 105 TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALL 184 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHH
Confidence 2222333233333333334445566789999999999999999999999999999999888888 579999999888776
Q ss_pred HHhh
Q psy10294 163 GIGF 166 (226)
Q Consensus 163 ~i~~ 166 (226)
.+..
T Consensus 185 ll~~ 188 (491)
T PRK11010 185 IPCI 188 (491)
T ss_pred HHHH
Confidence 6654
No 121
>KOG2504|consensus
Probab=99.13 E-value=4.6e-10 Score=100.01 Aligned_cols=149 Identities=17% Similarity=0.207 Sum_probs=112.2
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
.+..+.+.+.++++.+. +..|..++......+.+++.+.+.||+|.|++.+.+.++..+..+...+ ..+...+
T Consensus 64 ~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF------~~~i~~l 137 (509)
T KOG2504|consen 64 SFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSF------ATSLWQL 137 (509)
T ss_pred eehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHH------HhhHHHH
Confidence 34467788888888877 6788888888888999999999999999999999999999985444444 1223333
Q ss_pred HHHHHHHHHHhccccchhh-HHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGILALPW-MLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~-~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.+......+.+.+....+. +.+. .+.+|+|+.++|+......+|.++.|.+..++.+.+|||+.+++.+.+.+-..
T Consensus 138 ~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~ 214 (509)
T KOG2504|consen 138 YLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVL 214 (509)
T ss_pred HHHHHHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3333333333444332222 2344 45567799999999999999999999999999999999999999888876554
No 122
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.13 E-value=2.3e-09 Score=91.27 Aligned_cols=147 Identities=14% Similarity=0.213 Sum_probs=98.1
Q ss_pred cccHHHHH-hhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 13 RPYLVEIF-QTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 13 ~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
..+.|.+. +++|.+. +..+..........++.++.+++.||+|||+.+..+.....+....... ..+.+....
T Consensus 219 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 293 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA-----DNSLWALLM 293 (375)
T ss_pred HhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH-----HHHHHHHHH
Confidence 34456665 4578776 4555555555566778899999999999999888776654443222222 112222222
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.......+.+. ..+....+..|..|++ |+++.++.+....++..+++.+.+.+.+..||+..++..++...+..
T Consensus 294 ~~~~~g~~~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 367 (375)
T TIGR00899 294 LQLLNAIFIGI-LAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVAL 367 (375)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence 22222222222 2345556788988865 66999999999999999999999999999999988888777766654
No 123
>PRK03545 putative arabinose transporter; Provisional
Probab=99.12 E-value=8.9e-10 Score=94.89 Aligned_cols=147 Identities=16% Similarity=0.110 Sum_probs=97.3
Q ss_pred cccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 13 RPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 13 ~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
..+.|.+.++ .|.+. +..+......+..+++.++.+++.||+|||+... +..+.......... . ..+.+....
T Consensus 225 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~-~---~~~~~~~~~ 299 (390)
T PRK03545 225 YSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLP-A---ANSEWHLSV 299 (390)
T ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHH-H---hchHHHHHH
Confidence 3455655555 67776 5667777788889999999999999999887543 33333332222111 0 122222222
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
...+.+.......+.....+.|..| +.|+++.|+.+....++..+++.+.+.+.+++|++..++..+.+..+..
T Consensus 300 -~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~ 373 (390)
T PRK03545 300 -LSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAAL 373 (390)
T ss_pred -HHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHH
Confidence 2222222222233334456667766 5789999999999999999999999999999999988888877777665
No 124
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.10 E-value=1.5e-09 Score=105.34 Aligned_cols=128 Identities=9% Similarity=-0.006 Sum_probs=88.3
Q ss_pred HHHhhcCCCch---HHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHH
Q psy10294 18 EIFQTFGVPLK---SEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCI 94 (226)
Q Consensus 18 ~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (226)
.+..+++.+.. ..+..++..+...++++++|+++||+|||++++++..+.++..+....+.. ..+...+....+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~ 111 (1146)
T PRK08633 35 TLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY---LGWFWLAFAVTF 111 (1146)
T ss_pred HHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH---HccHHHHHHHHH
Confidence 34444555432 245566777888899999999999999999999887765552222221010 122333333333
Q ss_pred HHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10294 95 CFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW 148 (226)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (226)
+.+.......+....+++|++|+++|+++.|+......++..+++.+.+++.+.
T Consensus 112 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 112 LLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333334566678999999999999999999999999999999999988775
No 125
>KOG2533|consensus
Probab=99.10 E-value=3.1e-09 Score=94.16 Aligned_cols=141 Identities=16% Similarity=0.008 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHH-HHHHHHhhcCCCchHHHHHHHHHHHHHHhccccch
Q psy10294 28 KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFT-IALAICSMNLHWPGWIPLTIFCICFWISGYGILAL 106 (226)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (226)
+-+...+++.++.+++.+.++.+.||+.-.+.+....+...+.. +.... .+...+....++.+.+..+..|.
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~-------~s~~~~ialr~llGl~es~~wP~ 154 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV-------HSFPGLIALRFLLGLFESGGWPG 154 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-------hhhHHHHHHHHHHHHHhcccchH
Confidence 34577889999999999999999999996666666555555533 22222 22333444444445555555566
Q ss_pred hhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH------HhhchhhHHHHHHHHHHHhhhhhhcccccccccc
Q psy10294 107 PWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI------TWFGLHGTLFIYSFITGIGFAIRIRGVACGICAA 180 (226)
Q Consensus 107 ~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 180 (226)
...+++.++.+++|++-+++.+....+|+++++.+...+. ...|||+.|++.++++++..
T Consensus 155 ~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~g-------------- 220 (495)
T KOG2533|consen 155 VVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLG-------------- 220 (495)
T ss_pred HHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHH--------------
Confidence 6678999999999999999999999999999998887753 34689999999999999988
Q ss_pred eeEEEEecc
Q psy10294 181 INSIVCFLV 189 (226)
Q Consensus 181 ~~~~~~~~e 189 (226)
+++++++|+
T Consensus 221 i~~f~~lp~ 229 (495)
T KOG2533|consen 221 IVVFFFLPD 229 (495)
T ss_pred heEEEEecC
Confidence 889999998
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.09 E-value=5.7e-10 Score=97.08 Aligned_cols=155 Identities=14% Similarity=0.072 Sum_probs=94.5
Q ss_pred cceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 9 FVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 9 ~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
.....+++|.++++ +|++. +.+...+...+...+++++.|+++||+|||+.++++..+..+........... .....
T Consensus 26 ~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 104 (420)
T PRK09528 26 WSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFA-PLLQY 104 (420)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 34556777777776 89988 77888999999999999999999999999999887665554421111110000 00000
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCC--cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFP--VRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGI 164 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 164 (226)
.............+.+..+.. ....++.+ .+.|+...|.......+|..+++.+.+.+.+ .+|+..|+..+....+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~ 182 (420)
T PRK09528 105 NILLGAIVGGIYLGFGFLAGA-GAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALI 182 (420)
T ss_pred HHHHHHHHHHHHhhhhhccch-hhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHH
Confidence 001111111111111111111 11222222 2456777788888889999999999888766 4888888887766665
Q ss_pred hh
Q psy10294 165 GF 166 (226)
Q Consensus 165 ~~ 166 (226)
..
T Consensus 183 ~~ 184 (420)
T PRK09528 183 LL 184 (420)
T ss_pred HH
Confidence 54
No 127
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.09 E-value=1.7e-09 Score=93.16 Aligned_cols=158 Identities=12% Similarity=0.005 Sum_probs=101.4
Q ss_pred cccceecccHHHHHhhcCCCc-hHHHH--HHHHHHHHHHHHHHH-HHHhcccCChHHHHHHHHHHHH-HHHHHHHHhhcC
Q psy10294 7 SSFVSMRPYLVEIFQTFGVPL-KSEWV--LVLTGVLAITGSLVS-SLTVNKFGKRPMSLWSTGICFV-FTIALAICSMNL 81 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~-~~~~~--~~~~~~~~~~~~~~~-~~l~d~~Grr~~~~~~~~~~~i-~~~~~~~~~~~~ 81 (226)
.......+++|.++++.|.+. +.+.. .....+...+.+++. ++..||+|||+..++...+... ....... ....
T Consensus 15 ~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~-~~~~ 93 (390)
T TIGR02718 15 IPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLAL-VGPD 93 (390)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHc-CCcc
Confidence 344556789999999999987 55554 345566776776666 5678999999987655533222 2222221 0011
Q ss_pred CCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q psy10294 82 HWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFI 161 (226)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (226)
.......+. .............+....+..|..+++.++...+.......+|..+++....++.+++|||.+|++.+.+
T Consensus 94 ~~~~~~~~~-~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l 172 (390)
T TIGR02718 94 VAGAGWAVG-LLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACV 172 (390)
T ss_pred hhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 111112122 2222222233334445556778888888888888887777888899988888889999999999988887
Q ss_pred HHHhh
Q psy10294 162 TGIGF 166 (226)
Q Consensus 162 ~~i~~ 166 (226)
..+..
T Consensus 173 ~~~~~ 177 (390)
T TIGR02718 173 PLASL 177 (390)
T ss_pred HHHHH
Confidence 76654
No 128
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.08 E-value=3.1e-09 Score=93.88 Aligned_cols=164 Identities=12% Similarity=0.035 Sum_probs=103.7
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhc----ccCChHHHHHHHHHHHH-HHHHHHHHhh-----
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVN----KFGKRPMSLWSTGICFV-FTIALAICSM----- 79 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d----~~Grr~~~~~~~~~~~i-~~~~~~~~~~----- 79 (226)
....+++.+.+++|.+. ..........+...+..++.|+++| |+|||+.++.+..+..+ ....+.....
T Consensus 22 l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~ 101 (477)
T TIGR01301 22 LQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLF 101 (477)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhc
Confidence 34566777888899987 6677777888888999999999999 59999999876444443 2222222000
Q ss_pred c----CCCchH---HHHHHHHHHHHHHhccccchhhHHhhccCCcchh--hhHHHHHHHHHHHHHHHHHHHHHHH--HHh
Q psy10294 80 N----LHWPGW---IPLTIFCICFWISGYGILALPWMLMSEIFPVRIR--GVACGICAAINSIVCFLVTKTYVTS--ITW 148 (226)
Q Consensus 80 ~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 148 (226)
. .....+ ..+..+.+..........| .-++++|.+|+++| +.+.++.+....+|+.+++.+.+.. .+.
T Consensus 102 ~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p-~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~ 180 (477)
T TIGR01301 102 GDNLDKKTKPRAIIVFVVGFWILDVANNMLQGP-CRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKI 180 (477)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHh
Confidence 0 000011 1111122222222222223 34689999999866 5788888888889999988877653 222
Q ss_pred h-------------chhhHHHHHHHHHHHhhhhhhcccccccccceeEEEEecc
Q psy10294 149 F-------------GLHGTLFIYSFITGIGFAIRIRGVACGICAAINSIVCFLV 189 (226)
Q Consensus 149 ~-------------g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~e 189 (226)
+ +.+..|++-+++..+.. ++..+..||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~--------------l~t~~~v~E 220 (477)
T TIGR01301 181 FPFTKTEACGVSCANLKSCFLIDIILLAILT--------------YIALSAVKE 220 (477)
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHH--------------HHHeeeeec
Confidence 2 34667777777666666 666677888
No 129
>KOG3764|consensus
Probab=99.08 E-value=3.4e-10 Score=95.80 Aligned_cols=133 Identities=11% Similarity=0.069 Sum_probs=107.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchh
Q psy10294 28 KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALP 107 (226)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (226)
+.++......+.+++.+++.|.+.||+|+|..+++|..+.....+...+ ...+..+...+.+.+..........
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf------g~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF------GNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH------cchhHHHHHHHHHhhhhHHHHHhhh
Confidence 4567788888999999999999999999999999999999886655555 2334444444444444333334445
Q ss_pred hHHhhccCCcch-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 108 WMLMSEIFPVRI-RGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 108 ~~~~~e~~p~~~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
..++++.||.+. |++++|+.-.+..+|..++|+.++.+.+..|.+.+|.+.+++.++..
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~ 240 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDG 240 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHH
Confidence 568889999855 79999999999999999999999999999999999999999998876
No 130
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.07 E-value=2.6e-10 Score=104.31 Aligned_cols=136 Identities=12% Similarity=-0.003 Sum_probs=98.1
Q ss_pred cccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hc----------
Q psy10294 13 RPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICS-MN---------- 80 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~-~~---------- 80 (226)
..-+|++.++++++. +.++..+...++..++.++.+++.||+|||+.+.++.++.++..+....-. ..
T Consensus 53 ~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 53 NSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred HhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 344677788899987 778888899999999999999999999999999999888888332222101 00
Q ss_pred ---------------C-----------------C--CchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHH
Q psy10294 81 ---------------L-----------------H--WPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGI 126 (226)
Q Consensus 81 ---------------~-----------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~ 126 (226)
. . ...+..+.+..++.+.......+....++.|.+|+++|++..++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 0 0 00122232333333333333345667899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q psy10294 127 CAAINSIVCFLVTKTYVTSITW 148 (226)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~ 148 (226)
.+....+|..+++.+.+.+.+.
T Consensus 213 ~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 213 LESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred HHHHHHhhhHHHHHHHHHHHhc
Confidence 9999999999999998887754
No 131
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.07 E-value=1.1e-08 Score=87.80 Aligned_cols=145 Identities=9% Similarity=0.000 Sum_probs=102.9
Q ss_pred cccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 13 RPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
..++|.+.++.|.+. +.........+...++.+..+++.||+|||+.+..+.....+....... .. .. ...
T Consensus 220 ~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~------~~-~~-~~~ 291 (381)
T PRK03633 220 YGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLS------QA-AM-APA 291 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhh------hH-HH-HHH
Confidence 456788888888876 5566667778888999999999999999999888776666553222111 11 11 111
Q ss_pred HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 92 FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
....+ ..+....|.....+.|..|+++++...+.......+|+.++|.+.+.+.++.|+++.|.+.+.+.++..
T Consensus 292 ~~l~g-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 292 LFILG-AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHH-HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH
Confidence 11111 112233455666778999988888888887788889999999999999999999888888777766554
No 132
>PRK03699 putative transporter; Provisional
Probab=99.06 E-value=3.5e-09 Score=91.45 Aligned_cols=150 Identities=15% Similarity=0.090 Sum_probs=102.6
Q ss_pred ceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 10 VSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
+.+..|.|.+.++ +|++. +.........++..++.++.++++||++||+.+.....+..+....... ..+...
T Consensus 222 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~ 296 (394)
T PRK03699 222 LTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVN-----TDDPSH 296 (394)
T ss_pred HHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-----cCCchH
Confidence 4556788988854 68887 5667777888889999999999999999999887766655543222222 112222
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
........+ ....+..+....+..|..|. .+++..+.......+++.++|.+.+++.+..|++..++..+.+..+..
T Consensus 297 ~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~ 373 (394)
T PRK03699 297 LLYAILGLG-FFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVF 373 (394)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHH
Confidence 222222222 22222334444566676664 467778888888899999999999999999999888887777666654
No 133
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.05 E-value=1.6e-09 Score=91.83 Aligned_cols=142 Identities=16% Similarity=0.133 Sum_probs=90.8
Q ss_pred ceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCC-hHHHHHHHH-HHHHHHHHHHHHhhcCCCch
Q psy10294 10 VSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGK-RPMSLWSTG-ICFVFTIALAICSMNLHWPG 85 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Gr-r~~~~~~~~-~~~i~~~~~~~~~~~~~~~~ 85 (226)
..+..+.|.+.++ .|.+. +.........+...++.++.+++.||..+ |+....... ........... .....+
T Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 309 (379)
T TIGR00881 233 TGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYW---LNPAAN 309 (379)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh---cCcchh
Confidence 3445667777754 68876 56677778888899999999999998643 332221111 11111111111 001112
Q ss_pred HHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhH
Q psy10294 86 WIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGT 154 (226)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 154 (226)
...........+....+..+..+.+.+|.+|++.|+++.|+.+....+++.+++.+.+.+.+++||+..
T Consensus 310 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 310 PLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 222222222222223333444566788999999999999999999999999999999999999998764
No 134
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.04 E-value=6.7e-10 Score=95.86 Aligned_cols=156 Identities=10% Similarity=0.028 Sum_probs=95.1
Q ss_pred cccceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCC-C
Q psy10294 7 SSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLH-W 83 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~-~ 83 (226)
.+.....+++|.+.++ +|.+. +..+......+...++.++.|+++||+|||+.++.+.....+............. .
T Consensus 16 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (396)
T TIGR00882 16 FIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQ 95 (396)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3444556777777654 79887 7788889999999999999999999999999998776665542221111000000 0
Q ss_pred chHH-HHHHHH-HHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q psy10294 84 PGWI-PLTIFC-ICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFI 161 (226)
Q Consensus 84 ~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (226)
.... ...... ......+. ..+....+..|.. +.++...|.....+.+|..+++.+.+.+.+ .+|+..|++.+.+
T Consensus 96 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~ 171 (396)
T TIGR00882 96 SNILVGAIVGGLYLGFVFSA-GAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGF 171 (396)
T ss_pred HHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHH
Confidence 0111 111111 11111221 2233333444432 234455667777778888899988877654 5999988887777
Q ss_pred HHHhh
Q psy10294 162 TGIGF 166 (226)
Q Consensus 162 ~~i~~ 166 (226)
..+..
T Consensus 172 ~~~~~ 176 (396)
T TIGR00882 172 ALILM 176 (396)
T ss_pred HHHHH
Confidence 66654
No 135
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.02 E-value=4.9e-10 Score=95.55 Aligned_cols=154 Identities=16% Similarity=0.198 Sum_probs=111.6
Q ss_pred ceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc--CChHHHHHHHHHHHHHHHHHHHHhhcCCCch
Q psy10294 10 VSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF--GKRPMSLWSTGICFVFTIALAICSMNLHWPG 85 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~--Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (226)
+.+..|.|.++.| .|++. ++.+..+.+=.+.++|++++|+++||. |||...-+...+.....+..+. .++..+
T Consensus 269 ~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w---~~~~~~ 345 (448)
T COG2271 269 YGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYW---LAPNGS 345 (448)
T ss_pred HHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH---cCCCcc
Confidence 3556788888866 68887 788999999999999999999999996 6776554333332222222222 222233
Q ss_pred HHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q psy10294 86 WIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSI-VCFLVTKTYVTSITWFGLHGTLFIYSFITGI 164 (226)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 164 (226)
+..........++.-.|+.-+.-....|..|.+--|++.|+...++.+ |...+....+++.+.+||.+.|....+...+
T Consensus 346 ~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l 425 (448)
T COG2271 346 YLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALL 425 (448)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHH
Confidence 444444444455555566656667888999999999999999999998 8888888888888889999988877776666
Q ss_pred hh
Q psy10294 165 GF 166 (226)
Q Consensus 165 ~~ 166 (226)
..
T Consensus 426 ~~ 427 (448)
T COG2271 426 AI 427 (448)
T ss_pred HH
Confidence 54
No 136
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.02 E-value=4.2e-09 Score=91.73 Aligned_cols=154 Identities=13% Similarity=0.150 Sum_probs=94.6
Q ss_pred eecccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcc----cCChHH-HHHHHHHHHHHHHHHHHHhhcCCC
Q psy10294 11 SMRPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNK----FGKRPM-SLWSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 11 ~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~----~Grr~~-~~~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
....|++.++. ++|++. ..+.......+...+..++.|+++|| +|||+. ++.+.....+..+.... ......
T Consensus 17 ~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~-~~~~~~ 95 (437)
T TIGR00792 17 IVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT-TPDFSA 95 (437)
T ss_pred HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh-CCCCCc
Confidence 34455555555 579987 67788888889999999999999997 677554 55566665553333333 111001
Q ss_pred ch-HHH-HHHHHHHHHHHhccccchhhHHhhccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-------hhchhh
Q psy10294 84 PG-WIP-LTIFCICFWISGYGILALPWMLMSEIF-PVRIRGVACGICAAINSIVCFLVTKTYVTSIT-------WFGLHG 153 (226)
Q Consensus 84 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~ 153 (226)
.. ... .........+.+.. ..-..++..|+. ++++|++..++...+..+|..+.+.+.+.+.. ..+|+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~-~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~ 174 (437)
T TIGR00792 96 TGKLVYAYITYILLGLFYSFV-NIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFM 174 (437)
T ss_pred chHHHHHHHHHHHHHHHHHhh-cccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHH
Confidence 11 111 11112222222221 111234667876 57899999999888888887776665544442 457888
Q ss_pred HHHHHHHHHHHhh
Q psy10294 154 TLFIYSFITGIGF 166 (226)
Q Consensus 154 ~~~~~~~~~~i~~ 166 (226)
.+.+.+++..+..
T Consensus 175 ~~~i~~~l~~~~~ 187 (437)
T TIGR00792 175 FALVLALIGVVSL 187 (437)
T ss_pred HHHHHHHHHHHHH
Confidence 8888887777665
No 137
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.00 E-value=4e-09 Score=102.60 Aligned_cols=125 Identities=9% Similarity=-0.153 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH-HHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhh
Q psy10294 30 EWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV-FTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPW 108 (226)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (226)
.+......+...+.++++|+++||+|||+++........+ ....... .. ..+...+....++.+.......+...
T Consensus 55 ~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~-~~---~~s~~~l~~~~~l~gi~~a~~~p~~~ 130 (1140)
T PRK06814 55 TLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYG-FH---LNSVPLLFAALFLMGIHSALFGPIKY 130 (1140)
T ss_pred HHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHH-HH---HhhHHHHHHHHHHHHHHHHhhchHHH
Confidence 3445566777789999999999999999976442222222 1111111 10 12333344444444444444567788
Q ss_pred HHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q psy10294 109 MLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIY 158 (226)
Q Consensus 109 ~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (226)
.++.|++|++.|++++|+.++...++..+++.+.+.+....+|+..|+..
T Consensus 131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~ 180 (1140)
T PRK06814 131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALL 180 (1140)
T ss_pred HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 89999999999999999999999999999999999999999998777333
No 138
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.00 E-value=3.1e-09 Score=91.62 Aligned_cols=128 Identities=9% Similarity=0.011 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHHhh
Q psy10294 33 LVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWMLMS 112 (226)
Q Consensus 33 ~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (226)
.....++..++.+..++++||+|||+.+..+.....+..+.... ....+.........+.+.+ ...+.......
T Consensus 264 ~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~ 337 (408)
T PRK09874 264 ASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSF-----VQTPLQLGILRFLLGAADG-ALLPAVQTLLV 337 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHhhhH-hhHHHHHHHHH
Confidence 34456667788888999999999999988877766553333332 1222222222222222222 22344445667
Q ss_pred ccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 113 EIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 113 e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
|..|++.|++..++......++..++|.+.+.+.++.||+..|+..+++.++..
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~ 391 (408)
T PRK09874 338 YNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNA 391 (408)
T ss_pred HhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999998888887777665
No 139
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.99 E-value=1.7e-08 Score=85.07 Aligned_cols=132 Identities=14% Similarity=0.069 Sum_probs=94.4
Q ss_pred ccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 14 PYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 14 ~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
.+.|.+.++ +|.+. +.........++..++.++.+++.||+|||+.+..+..+..+....... . ..+.+.....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~ 307 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGL-T---PPNFPLFLVL 307 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHh-h---chhHHHHHHH
Confidence 567777776 68876 5667777888888999999999999999999888776665553333332 0 1112222222
Q ss_pred HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10294 92 FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG 150 (226)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 150 (226)
....+.+.+ ...+....+..|..|+++|+++.|+.+....++..+++.+.+.+.+++|
T Consensus 308 ~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 308 WFAIGVGYG-PINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 222222222 2345566788999999999999999999999999999999998888654
No 140
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.99 E-value=4.2e-09 Score=91.74 Aligned_cols=119 Identities=13% Similarity=0.115 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchh
Q psy10294 28 KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALP 107 (226)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (226)
...+......+..+++.++.++++||+|||+.+..+..+..+....... . ..+.+.........+.+.+ ...+..
T Consensus 258 ~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~g~~~~-~~~~~~ 332 (437)
T TIGR00792 258 LFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFF--A--GSNLPLILVLIILAGFGQN-FVTGLV 332 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH--c--chhHHHHHHHHHHHHHHHH-HHHHHH
Confidence 3445556667888899999999999999999998887776663333222 0 1122222222222222222 234556
Q ss_pred hHHhhccCC-------cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q psy10294 108 WMLMSEIFP-------VRIRGVACGICAAINSIVCFLVTKTYVTSITWFGL 151 (226)
Q Consensus 108 ~~~~~e~~p-------~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 151 (226)
+.+.+|..| ++.+|+..|+.+....++..+++.+.+.+.+..|+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 333 WALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 777778765 56789999999999999999999999999887765
No 141
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.98 E-value=7.3e-09 Score=88.96 Aligned_cols=151 Identities=11% Similarity=0.119 Sum_probs=90.6
Q ss_pred cccccceecccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHhcccCCh---HHHHH-HHHHHHHHHHHHHHHhhc
Q psy10294 5 FNSSFVSMRPYLVEIFQTFGVPLKSEWVLVLTGVLAITGSLVSSLTVNKFGKR---PMSLW-STGICFVFTIALAICSMN 80 (226)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr---~~~~~-~~~~~~i~~~~~~~~~~~ 80 (226)
.....+.+..|+|+++++.|++.+......+.. ..+.+..++++||..|| +.... ......+.......
T Consensus 204 ~~~~~~~~~~wlp~~L~~~g~s~~~~~~~~l~~---~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~---- 276 (368)
T TIGR00903 204 GVALFDNLAIWLEAALRPAGLEDIAGDAVALAI---LAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAF---- 276 (368)
T ss_pred HHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHH---HHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH----
Confidence 344556778899999988887644333333333 34445557788887653 33222 22222222111111
Q ss_pred CCCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHH
Q psy10294 81 LHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSF 160 (226)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (226)
............. ......+..+..+.+.+|.+|++.|+++.|+.+..+++++..+|.+.+.+.. +.+..|..++.
T Consensus 277 -~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~ 352 (368)
T TIGR00903 277 -ELNRLALFAFIGI-AGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAI 352 (368)
T ss_pred -ccccHHHHHHHHH-HHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHH
Confidence 1122222222222 2222222334566789999999999999999999999999999998887663 55566777776
Q ss_pred HHHHhh
Q psy10294 161 ITGIGF 166 (226)
Q Consensus 161 ~~~i~~ 166 (226)
...+..
T Consensus 353 ~~~i~~ 358 (368)
T TIGR00903 353 LITIAF 358 (368)
T ss_pred HHHHHH
Confidence 666654
No 142
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.96 E-value=2.7e-09 Score=94.63 Aligned_cols=147 Identities=12% Similarity=0.094 Sum_probs=85.7
Q ss_pred ecccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChH-------HHHHHHHHHHHHHHHHHHHhhcCC
Q psy10294 12 MRPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRP-------MSLWSTGICFVFTIALAICSMNLH 82 (226)
Q Consensus 12 ~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~-------~~~~~~~~~~i~~~~~~~~~~~~~ 82 (226)
+..+.|.++. ++|++. +......+..+...++.+++|+++||+|||+ .......+..+..+.... .
T Consensus 271 ~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~-----~ 345 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR-----A 345 (476)
T ss_pred HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc-----c
Confidence 3456777765 468887 6677778888999999999999999998762 111222221111111111 1
Q ss_pred CchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q psy10294 83 WPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFIT 162 (226)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 162 (226)
.+.............+.+. ..+..+.+..|.. ++.|+++.|+.+..+.+++.+++.+.. ..+..+|+..|+..+++.
T Consensus 346 ~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~ 422 (476)
T PLN00028 346 NSLGAAIVVMILFSIFVQA-ACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMI 422 (476)
T ss_pred chHHHHHHHHHHHHHHHHH-hhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHH
Confidence 1222222222222222221 2223445566664 478999999998888788888776653 112335777787777666
Q ss_pred HHhh
Q psy10294 163 GIGF 166 (226)
Q Consensus 163 ~i~~ 166 (226)
+++.
T Consensus 423 ~i~~ 426 (476)
T PLN00028 423 IACT 426 (476)
T ss_pred HHHH
Confidence 6554
No 143
>TIGR00895 2A0115 benzoate transport.
Probab=98.96 E-value=9.4e-09 Score=87.70 Aligned_cols=130 Identities=15% Similarity=0.134 Sum_probs=88.0
Q ss_pred ceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 10 VSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
+....+.|.+.++.|.+. +.........++..++.++.++++||+|||+.................. ....+..
T Consensus 267 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 341 (398)
T TIGR00895 267 YFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGST-----LFSPTLL 341 (398)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH-----hhCHHHH
Confidence 344567787778888887 5667777888889999999999999999995544333332222222111 1222222
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTS 145 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (226)
.......+.+.+ ...+..+.+.+|.+|+++|+++.|+.+....++..++|.+.+.+
T Consensus 342 ~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 342 LLLGAIAGFFVN-GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 222233222222 23455677899999999999999999999999999999887653
No 144
>PRK10504 putative transporter; Provisional
Probab=98.92 E-value=1.1e-08 Score=90.15 Aligned_cols=137 Identities=10% Similarity=0.044 Sum_probs=91.8
Q ss_pred ecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 12 MRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 12 ~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
...+.|.+++. .|.+. +..+......+...++.++.+++.||+|||+.+..+..+..+....... . ......+...
T Consensus 280 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~ 357 (471)
T PRK10504 280 LPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFML-V-ALLGWYYLLP 357 (471)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHh-c-cccccHHHHH
Confidence 34567777774 78776 5566666677777778899999999999999998887766663332222 1 1011111111
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGL 151 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 151 (226)
......+.+.+.. .+....+..+..|++.|+++.++.+....++..+++.+.+.+.+..|+
T Consensus 358 ~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 358 FVLFLQGMVNSTR-FSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1122222222222 233446777899999999999999999999999999999888777664
No 145
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.92 E-value=2.3e-08 Score=88.57 Aligned_cols=157 Identities=14% Similarity=0.100 Sum_probs=109.8
Q ss_pred cceecccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCCh--HHHHHHHHHHHH-HHHHHHHHhhc--C
Q psy10294 9 FVSMRPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKR--PMSLWSTGICFV-FTIALAICSMN--L 81 (226)
Q Consensus 9 ~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr--~~~~~~~~~~~i-~~~~~~~~~~~--~ 81 (226)
...+......+.+ ++|++. +.........+.+++|+++++++.||+|.| ++++.+.+...+ ...+..-.... .
T Consensus 297 ~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g 376 (477)
T PF11700_consen 297 VNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFG 376 (477)
T ss_pred HHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 3334444445554 588887 556677788899999999999999999999 888777776654 33333310000 0
Q ss_pred CCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHH
Q psy10294 82 HWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTLFIYSF 160 (226)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~ 160 (226)
....+... .+....+....+..+..-++.+|+.|+.+.+.-.|+....+...++++|.+.+.+.+..| .|..+....+
T Consensus 377 ~~~~~~f~-~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~ 455 (477)
T PF11700_consen 377 LKSPWEFW-VLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLV 455 (477)
T ss_pred cccHHHHH-HHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 12233322 222233333334456777899999999999999999999999999999999999998887 6777777766
Q ss_pred HHHHhh
Q psy10294 161 ITGIGF 166 (226)
Q Consensus 161 ~~~i~~ 166 (226)
+.+++.
T Consensus 456 lf~~gl 461 (477)
T PF11700_consen 456 LFLIGL 461 (477)
T ss_pred HHHHHH
Confidence 666665
No 146
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.90 E-value=1.1e-07 Score=84.84 Aligned_cols=150 Identities=11% Similarity=0.008 Sum_probs=98.3
Q ss_pred cHHHHH-hhcCCCc-hHHHHH-HHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 15 YLVEIF-QTFGVPL-KSEWVL-VLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 15 ~~~~~~-~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
+.+.++ ++.|++. +..... ....++.+++.+++|+++||+|||+.+..+..+..+..+........ ..+.+.....
T Consensus 244 ~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~-~~~~~~l~~~ 322 (491)
T PRK11010 244 LTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT-DKNLYSMGAA 322 (491)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-cccHHHHHHH
Confidence 445554 5578887 555554 35557889999999999999999988776665544422221110111 1122221212
Q ss_pred HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 92 FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
........+.+. +..+.+..|..|++.+++..++.+....++..+.+.+.+.+.+.+||+..|.+.+.+.+++.
T Consensus 323 ~~l~~~~~g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l 396 (491)
T PRK11010 323 VFFENLCGGMGT-AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGL 396 (491)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 222112222222 23456778999999999999999999999999888899999999999887777777766654
No 147
>KOG0253|consensus
Probab=98.90 E-value=6.9e-09 Score=87.37 Aligned_cols=137 Identities=16% Similarity=0.140 Sum_probs=96.6
Q ss_pred hhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHH
Q psy10294 21 QTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWIS 99 (226)
Q Consensus 21 ~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (226)
...|.+. +....+.....+..+++..+|..+|++|||+.+........+....... +++... +...-...++
T Consensus 106 ~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~------spnf~~-L~~f~~l~~~ 178 (528)
T KOG0253|consen 106 EVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGA------SPNFAS-LCVFRALWGF 178 (528)
T ss_pred hhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcC------CCCeeh-hhHHHHHHhc
Confidence 3345555 5567777888899999999999999999999988777766653322222 333333 3333334455
Q ss_pred hccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHh
Q psy10294 100 GYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 100 ~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 165 (226)
+.|..|...++-.|..|...|...+-+. ....+|......+.-....++|||+.++.......+.
T Consensus 179 g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~ 243 (528)
T KOG0253|consen 179 GVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFA 243 (528)
T ss_pred cCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHH
Confidence 5555677666777999999999887666 7778888888888777888999998766666444444
No 148
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.89 E-value=8.6e-08 Score=82.48 Aligned_cols=150 Identities=11% Similarity=-0.016 Sum_probs=107.6
Q ss_pred cceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 9 FVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
......+.|.+.++.|.+. ..........+..+++.+..+.+.||+|+|+.+.++.+...+....... .++.+.
T Consensus 221 ~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~-----~~~~~~ 295 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGA-----IEAFPL 295 (382)
T ss_pred HHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHh-----HhhHHH
Confidence 3345567788888889887 5666666777888889999999999999999999888888873333332 123333
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAA-INSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
......+.+..++.. .+....++++. |++.|+++.++.+. ...++..+++.+.+++.+++|. ..|+..+.+.++..
T Consensus 296 ~~~~q~l~g~~~~~~-~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 296 IFLLQILHCGTFAVC-HLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 344444444444433 23445678787 99999999998764 5668899999999999999986 56777777766554
No 149
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.88 E-value=1.1e-07 Score=81.94 Aligned_cols=154 Identities=11% Similarity=0.014 Sum_probs=96.3
Q ss_pred ecccHHHHHhhcCCCc-hHHHHHHHHH-HHHHHHHHHHHHHhcccCChHHHHHHHHHHHH-HHHHHHHHhhcCCCchHHH
Q psy10294 12 MRPYLVEIFQTFGVPL-KSEWVLVLTG-VLAITGSLVSSLTVNKFGKRPMSLWSTGICFV-FTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 12 ~~~~~~~~~~~~g~~~-~~~~~~~~~~-~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~ 88 (226)
...+.+.+.+|.|++. +..+...... ....++.++.+++.||+|+|+.+..+.....+ ...................
T Consensus 227 ~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (390)
T TIGR02718 227 GFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVA 306 (390)
T ss_pred HHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHH
Confidence 3445677778888887 4555555444 35567789999999999999998877766533 2211111000000111111
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPV-RIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
...........+... +.......+..++ +.|++..++.+....++..+++.+.+.+.++.|++..|...+.+.++..
T Consensus 307 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 307 WSCSAFGSLITGITS-VAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 111111111222222 2333344455655 8999999999999999999999999999999999888877766655543
No 150
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.83 E-value=8.5e-08 Score=84.40 Aligned_cols=161 Identities=16% Similarity=0.189 Sum_probs=101.4
Q ss_pred ccccccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy10294 4 GFNSSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLH 82 (226)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 82 (226)
+.+.++..+..++|.+.++ .++. .......+..+...+..+++|+++||+|+|+++.++.+...+...........+.
T Consensus 263 ~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~ 341 (462)
T PRK15034 263 ATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTG 341 (462)
T ss_pred HHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3445556677788888876 3433 2223344556677888899999999999999999888877774433222111111
Q ss_pred Cch-HHHHHHHHHHHHHHhccccchhhHHhhccCCc---------------------chhhhHHHHHHHHHHHHHHHHHH
Q psy10294 83 WPG-WIPLTIFCICFWISGYGILALPWMLMSEIFPV---------------------RIRGVACGICAAINSIVCFLVTK 140 (226)
Q Consensus 83 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---------------------~~R~~~~~~~~~~~~~~~~~~~~ 140 (226)
..+ +.....+..+....+.+.+ ..+-++.+.+|+ ++-|...|+....+.+|+++.|.
T Consensus 342 ~~~~~~~~~~~~~l~~~~G~gng-svfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~ 420 (462)
T PRK15034 342 SGNFIAFYAVFMGLFLTAGLGSG-STFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQ 420 (462)
T ss_pred ccHHHHHHHHHHHHHHHhcccch-HHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhH
Confidence 111 2222222233344444443 344567777874 25677888999999999999999
Q ss_pred HHHHHHHhhc-hhhHHHHHHHHHHHhh
Q psy10294 141 TYVTSITWFG-LHGTLFIYSFITGIGF 166 (226)
Q Consensus 141 ~~~~~~~~~g-~~~~~~~~~~~~~i~~ 166 (226)
+++...+..| +...++.+.....++.
T Consensus 421 ~~g~~~~~~g~~~~~~~~~~~~~~~~~ 447 (462)
T PRK15034 421 AFGMSLNMTGSPVGAMKVFLIFYIVCV 447 (462)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 9988887765 4445666666555554
No 151
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.82 E-value=3.6e-08 Score=86.91 Aligned_cols=158 Identities=13% Similarity=0.060 Sum_probs=95.5
Q ss_pred cccccceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHH-------HHHHHHHHH-HHHHH
Q psy10294 5 FNSSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMS-------LWSTGICFV-FTIAL 74 (226)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~-------~~~~~~~~i-~~~~~ 74 (226)
+..+.+.+..|+|.++++ .|.+. +..+...+..++..++.++.|+++||+++|+.. +........ .....
T Consensus 273 ~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (465)
T TIGR00894 273 HFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAY 352 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667889988865 68887 667777788899999999999999998654211 111111111 11111
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh---ch
Q psy10294 75 AICSMNLHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWF---GL 151 (226)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~ 151 (226)
.. ..........+..+.....+.+ +..+..+....|..|. .+|.+.++.+..+.+++.++|.+.+.+.+.. +|
T Consensus 353 ~~--~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~ 428 (465)
T TIGR00894 353 AL--PYLSAAFYLTIIILTLANAVSS-GPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVW 428 (465)
T ss_pred HH--HHcCCchHHHHHHHHHHHHHhh-hhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHH
Confidence 11 0001122222222222222221 1223333445566665 8999999999999999999999988876542 37
Q ss_pred hhHHHHHHHHHHHhh
Q psy10294 152 HGTLFIYSFITGIGF 166 (226)
Q Consensus 152 ~~~~~~~~~~~~i~~ 166 (226)
+..|.+.++..++..
T Consensus 429 ~~~f~~~~~~~~i~~ 443 (465)
T TIGR00894 429 LIVFLIMAFVNILCV 443 (465)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777777777776665
No 152
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.82 E-value=8.1e-08 Score=86.06 Aligned_cols=137 Identities=14% Similarity=0.121 Sum_probs=96.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchh
Q psy10294 28 KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALP 107 (226)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (226)
..........+-.++.++++|.++||+.||+.++.+..+..+....+......+..+.+..+. +.+..+....-..|.-
T Consensus 46 ~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~-~~fl~g~~~a~~~PA~ 124 (524)
T PF05977_consen 46 MVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLI-LTFLLGIGSAFFNPAW 124 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHH-HHHHHHHHHHHHHHHH
Confidence 334555566666678899999999999999999999888776332222211222223333333 3333333333345777
Q ss_pred hHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHh
Q psy10294 108 WMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 108 ~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 165 (226)
.+++.|+.|+++-..+.++.+...++...++|.+.+.+...+|....|.+.++..++.
T Consensus 125 ~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~ 182 (524)
T PF05977_consen 125 QAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLIS 182 (524)
T ss_pred HHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999888877777665544443
No 153
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.81 E-value=1.1e-07 Score=83.82 Aligned_cols=137 Identities=12% Similarity=-0.022 Sum_probs=93.0
Q ss_pred ceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 10 VSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
+....++|.++++ .|.+. +..+......++..++.++.+++.||+|||+.+..+..+..+....... ......+.+.
T Consensus 272 ~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~ 350 (485)
T TIGR00711 272 YGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAF-TFTPDTPFLA 350 (485)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhc-cCCCCCCHHH
Confidence 3445678888876 68887 6677777888889999999999999999999988877766653332221 1111122222
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW 148 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (226)
........+.+.+....+. .....|..|+++|+++.++.+....+++.+++.+.+.+.++
T Consensus 351 ~~~~~~l~g~g~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 351 IALPQFIRGFGMGCFFMPL-TTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222222222232 33456778999999999999999999999999998887765
No 154
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.81 E-value=9.4e-08 Score=77.50 Aligned_cols=139 Identities=14% Similarity=0.101 Sum_probs=94.1
Q ss_pred cccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCC-c
Q psy10294 7 SSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHW-P 84 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~-~ 84 (226)
...|.+..|.|++.+.+|++. +.........++..+ +++.|.+.|++|.|.++.++.+...+.......+....-. .
T Consensus 16 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~ 94 (250)
T PF06813_consen 16 GTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSL 94 (250)
T ss_pred CcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCcc
Confidence 456888999999999999997 556666677777766 4888999999999999999999888833333331222111 2
Q ss_pred hHHHHHHHHHHHHHHhccc-cchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10294 85 GWIPLTIFCICFWISGYGI-LALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW 148 (226)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (226)
+.+.+..... .++.+..+ +........+.|| ++||++.|+.-....+++.+.+.+.....+.
T Consensus 95 ~~~~~~~~~~-l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 95 PVWLMCLFLF-LGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred chHHHHHHHH-HHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 3333332222 22223222 2333334457788 4799999999999999888888777766554
No 155
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.77 E-value=6.5e-07 Score=76.84 Aligned_cols=152 Identities=13% Similarity=0.163 Sum_probs=107.7
Q ss_pred ccccceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10294 6 NSSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 6 ~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
++|.+....|+..++++ .|++. ...+....++++.++|+.++|.++|| +.|+.+.....+..+..+.+.. . ..
T Consensus 224 ~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~-~---~~ 298 (394)
T COG2814 224 MTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTF-T---GA 298 (394)
T ss_pred HcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHH-h---cc
Confidence 45666666776666665 68887 67888999999999999999999999 8888888776776664444333 0 12
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhcc--CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEI--FPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFI 161 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~--~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (226)
..+........ +++.... ....+..+. .-++.++.+.++.....++|..++..+++.+.+++|+....+.-+.+
T Consensus 299 ~~~~~~~~~~~--wg~a~~~--~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l 374 (394)
T COG2814 299 SPALALALLFL--WGFAFSP--ALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAAL 374 (394)
T ss_pred hHHHHHHHHHH--HHHHhhh--hhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Confidence 22222222222 3333333 332333333 33677999999999999999999999999999999998888877777
Q ss_pred HHHhh
Q psy10294 162 TGIGF 166 (226)
Q Consensus 162 ~~i~~ 166 (226)
..+..
T Consensus 375 ~~~a~ 379 (394)
T COG2814 375 LLLAL 379 (394)
T ss_pred HHHHH
Confidence 76665
No 156
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.77 E-value=2.2e-07 Score=78.95 Aligned_cols=134 Identities=12% Similarity=0.012 Sum_probs=88.0
Q ss_pred ceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc-CChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 10 VSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF-GKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
+....|+|.+.++.|.+. +.........++.+++.++.+++.||+ +||+.+..+..+..+....... ......
T Consensus 214 ~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 288 (355)
T TIGR00896 214 YSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLF-----APMHGL 288 (355)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH-----hhhhHH
Confidence 345567898998888887 566777888899999999999999999 5666666666555553332222 011111
Q ss_pred HHHHHHHHHHHHhccccchhhHHhh-ccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMS-EIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG 150 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~-e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 150 (226)
.. .....+.+.+. ..+.....+. +..+++.++...++.+....++..++|.+.+.+.++.|
T Consensus 289 ~~-~~~l~g~~~g~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 289 WA-WALVLGLGQGG-AFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HH-HHHHHHHhhhh-HhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 11222222221 2233333444 34456778899999888889999999999999998876
No 157
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.76 E-value=1.7e-07 Score=80.31 Aligned_cols=151 Identities=15% Similarity=0.101 Sum_probs=106.7
Q ss_pred ceecccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 10 VSMRPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 10 ~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
+.+......+.. ++|++. +.........+.+++|+++.|++.||+|-|+++..+.++..+..+...+ ......
T Consensus 269 ~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~-----~~~~~~ 343 (438)
T COG2270 269 NTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIF-----LEGELD 343 (438)
T ss_pred HHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHH-----ccccHH
Confidence 333344444554 688887 6677788889999999999999999999999999988888774333333 122222
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch-hhHHHHHHHHHHHhh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGL-HGTLFIYSFITGIGF 166 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~i~~ 166 (226)
. ....++.+.+-.+..+..-.|..++.|+++-++..|+.+..++..++++|...+...+..|- |..+.....+..++.
T Consensus 344 f-~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl 422 (438)
T COG2270 344 F-WILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGL 422 (438)
T ss_pred H-HHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhH
Confidence 2 22222222333344566677899999999999999999999999999999999988776653 545555555555553
No 158
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.76 E-value=4.4e-07 Score=78.05 Aligned_cols=147 Identities=12% Similarity=0.037 Sum_probs=91.2
Q ss_pred ccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 14 PYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 14 ~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
.|.+.+.+ ..|.+. +.........++..++.++.+++.||+|+|+.+..+..+..+..+.... . ....+.....
T Consensus 220 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~-~---~~~~~~~~~~ 295 (382)
T PRK10091 220 SYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFF-F---GGMKTASLIF 295 (382)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHH-H---HhhHHHHHHH
Confidence 34454454 478887 5667778888899999999999999999999988877766653222221 0 1122222222
Q ss_pred HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchhhHHHHHHHHHHHhh
Q psy10294 92 FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW-FGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~i~~ 166 (226)
......+......+.......+..|.+.++.+ ..+....+|..++|.+.+.+.+. .+|+..+...+.+..+..
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~ 369 (382)
T PRK10091 296 AFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAM 369 (382)
T ss_pred HHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHH
Confidence 22222222111122222344555566666554 34566789999999999998885 578877777666655543
No 159
>KOG0252|consensus
Probab=98.76 E-value=3.7e-08 Score=85.03 Aligned_cols=100 Identities=21% Similarity=0.136 Sum_probs=68.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHHHHHHHHHhccc-cc
Q psy10294 28 KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWP-GWIPLTIFCICFWISGYGI-LA 105 (226)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~ 105 (226)
..+.......++.+.|++++|++.||+|||+++...+++..++.+.... ....+.+ .....+.+.....+.+.|- .|
T Consensus 85 i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~-s~~~~~~~~~m~~L~~~R~~LGiGIGGDYP 163 (538)
T KOG0252|consen 85 VLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGL-SVGTTSPLGVMMTLCFFRFLLGIGIGGDYP 163 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhcc-CCCCCCCcchhhHHHHHHHHhhccccCCCc
Confidence 3467778889999999999999999999999999988888885543222 1111222 2222222223223333332 48
Q ss_pred hhhHHhhccCCcchhhhHHHHHH
Q psy10294 106 LPWMLMSEIFPVRIRGVACGICA 128 (226)
Q Consensus 106 ~~~~~~~e~~p~~~R~~~~~~~~ 128 (226)
...+.++|....+.||.-.+...
T Consensus 164 lSAtI~SE~an~~~RGa~iaavF 186 (538)
T KOG0252|consen 164 LSATIMSESANKKTRGAFIAAVF 186 (538)
T ss_pred chHHHhhhhhhhccccceeEEEE
Confidence 88899999999999998777543
No 160
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.75 E-value=2.3e-07 Score=80.07 Aligned_cols=131 Identities=13% Similarity=0.146 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhH
Q psy10294 30 EWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWM 109 (226)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (226)
........+...++.+..+++.||+|||+.+.++..+..+....... ..+.+.........+..... .......
T Consensus 257 g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~-----~~~~~~~~~~~~l~g~~~~~-~~~~~~~ 330 (396)
T TIGR00882 257 GYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSF-----ATTALEVVILKMLHAFEVPF-LLVGCFK 330 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh-----cCChHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 44555666777888899999999999999988877766663322222 12233222222222222111 1122334
Q ss_pred HhhccCCcchhhhHHHH-HHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 110 LMSEIFPVRIRGVACGI-CAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 110 ~~~e~~p~~~R~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+..|..|++.|+++.+. .+....+++.+++.+.+++.+..|++..|.+.+++..+..
T Consensus 331 ~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~ 388 (396)
T TIGR00882 331 YITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFT 388 (396)
T ss_pred HHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 66777888988887766 4667889999999999999999999998888888777665
No 161
>PRK09669 putative symporter YagG; Provisional
Probab=98.73 E-value=9.2e-08 Score=83.95 Aligned_cols=154 Identities=12% Similarity=0.079 Sum_probs=91.1
Q ss_pred eecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcc----cCChHHH-HHHHHHHHHHHHHHHHHhhcCC-
Q psy10294 11 SMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNK----FGKRPMS-LWSTGICFVFTIALAICSMNLH- 82 (226)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~----~Grr~~~-~~~~~~~~i~~~~~~~~~~~~~- 82 (226)
.+..|++.++.+ +|++. ..+....+..+...+..++.|+++|| +|||+.. +++.+...+.....+. .....
T Consensus 27 ~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~-~p~~~~ 105 (444)
T PRK09669 27 TVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFY-TPDFGA 105 (444)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHh-CCCCCc
Confidence 345566666654 79987 66777888888889999999999998 7875554 4555555553322222 11100
Q ss_pred Cch-HHHHHHHHHHHHHHhccccchhhHHhhccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------hchhh
Q psy10294 83 WPG-WIPLTIFCICFWISGYGILALPWMLMSEIF-PVRIRGVACGICAAINSIVCFLVTKTYVTSITW-------FGLHG 153 (226)
Q Consensus 83 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~ 153 (226)
... .+......+....+.....| ..++.+|+. ++++|++..++...+..+|+.+++.+...+... .+|+.
T Consensus 106 ~~~~~~~~~~~~l~~~~~t~~~ip-~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~ 184 (444)
T PRK09669 106 TGKIIYACVTYILLSLVYTAINVP-YCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFY 184 (444)
T ss_pred chHHHHHHHHHHHHHHHHHhhcch-HHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 111 11222222222222222222 235778887 568899888888877777777766544433332 35666
Q ss_pred HHHHHHHHHHHhh
Q psy10294 154 TLFIYSFITGIGF 166 (226)
Q Consensus 154 ~~~~~~~~~~i~~ 166 (226)
.+.+++++..+..
T Consensus 185 ~~~i~~ii~~v~~ 197 (444)
T PRK09669 185 AMMVMGLLGVVLF 197 (444)
T ss_pred HHHHHHHHHHHHH
Confidence 6666766665554
No 162
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.71 E-value=2.6e-07 Score=82.78 Aligned_cols=147 Identities=17% Similarity=0.089 Sum_probs=106.0
Q ss_pred ccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 14 PYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 14 ~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
..+|.+.++ +|.+. .-++.....++++++|+++.+.+.+|+++++.+..+.+..++..+.... ..+.+.....
T Consensus 239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal-----~~~~~~~~~~ 313 (524)
T PF05977_consen 239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLAL-----SPSFWLALIA 313 (524)
T ss_pred HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhc-----chHHHHHHHH
Confidence 446777654 67765 4567888999999999999999999999999888887777764444444 2233333333
Q ss_pred HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 92 FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+...+. ..........+...+..|++.||+..++..+....+..++..+.+.+.+.+|.+..+.+.++..++..
T Consensus 314 l~l~G~-~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 314 LFLAGA-AWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 333222 22223334456788999999999999999999999999999999999999998877766555444443
No 163
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.70 E-value=2.1e-07 Score=82.48 Aligned_cols=120 Identities=8% Similarity=0.029 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHH
Q psy10294 31 WVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWML 110 (226)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (226)
.......+..+++.++.+++.||+|||+.+.++..+..+..+.............+.......+...+.+ ...+..+.+
T Consensus 270 ~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~-~~~~~~~am 348 (473)
T PRK10429 270 YYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTA-LFWVLQVIM 348 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 4445556778889999999999999999998887765552222221001111122222222222222222 233556778
Q ss_pred hhccCC-------cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q psy10294 111 MSEIFP-------VRIRGVACGICAAINSIVCFLVTKTYVTSITWFGL 151 (226)
Q Consensus 111 ~~e~~p-------~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 151 (226)
++|..+ .|..|...|.......++..+++.+.+.+.+..|+
T Consensus 349 ~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 349 VADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 888854 34456677888888899999999999888876664
No 164
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.68 E-value=6.5e-07 Score=76.34 Aligned_cols=134 Identities=13% Similarity=0.150 Sum_probs=81.2
Q ss_pred eecccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 11 SMRPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 11 ~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
....+.|.+.+ +.|.+. +.........++..++.++.+++.||+|||+.+..+.....+........... .......
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 302 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAIL-GLGSWAM 302 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh-ccchHHH
Confidence 34455676665 578876 55667777888889999999999999999998887766665522222220100 1112222
Q ss_pred HHH-HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 89 LTI-FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT 147 (226)
Q Consensus 89 ~~~-~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (226)
... ....+.+.+. ..+....+..|..| +.|+++.++.+.....++.+.+.+.+...+
T Consensus 303 ~~~~~~~~g~~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 303 IIGPMMFVGIGNSM-ISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 221 2222222221 23445567778877 578999999888877655555555554433
No 165
>PRK09848 glucuronide transporter; Provisional
Probab=98.68 E-value=1.4e-07 Score=82.84 Aligned_cols=133 Identities=14% Similarity=0.060 Sum_probs=81.6
Q ss_pred cHHHHHhh-cCCCchH-HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHH
Q psy10294 15 YLVEIFQT-FGVPLKS-EWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIF 92 (226)
Q Consensus 15 ~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 92 (226)
..|.+.++ +|.+... .+......+..+++.++.+++.||+|+|+.+.++..++.+....... ....+.+......
T Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~---~~~~~~~~~~~~~ 326 (448)
T PRK09848 250 SSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFW---VSVWSLPVALVAL 326 (448)
T ss_pred hheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH---cCchhHHHHHHHH
Confidence 34444444 4544322 22233334566788999999999999999999988776663333222 0111222222222
Q ss_pred HHHHHHHhccccchhhHHhhccCCc-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q psy10294 93 CICFWISGYGILALPWMLMSEIFPV-------RIRGVACGICAAINSIVCFLVTKTYVTSITWFGL 151 (226)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~e~~p~-------~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 151 (226)
.+...+.+. ..+..+.+.+|..|. |.+|...|+.+....++..+++.+.+.+.+..|+
T Consensus 327 ~l~g~G~~~-~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 327 AIASIGQGV-TMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHH-HHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 222222222 234566677777764 3468889999999999999999988887776654
No 166
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.68 E-value=1.6e-07 Score=80.25 Aligned_cols=159 Identities=18% Similarity=0.262 Sum_probs=114.9
Q ss_pred ccccceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcC--
Q psy10294 6 NSSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNL-- 81 (226)
Q Consensus 6 ~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~-- 81 (226)
+.++..+..++|.++++ ++.+. ++............+.-+.+|+++||+|.++...+....+.++...........
T Consensus 231 FG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~ 310 (417)
T COG2223 231 FGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGH 310 (417)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcccccccc
Confidence 44566778889999876 78887 666777777777888889999999999999999888888887444444411111
Q ss_pred CCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHH
Q psy10294 82 HWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTLFIYSF 160 (226)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~ 160 (226)
..+....+..+.......+.|.++ .+-+++..+|. +-|...|+..+.+.+|++..|...+...+..| +...|+++..
T Consensus 311 ~~~~~~~~~~~l~l~~~~G~GnGs-vfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~ 388 (417)
T COG2223 311 GGSFVVFVAVFLALFVFAGLGNGS-VFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLA 388 (417)
T ss_pred CcchHHHHHHHHHHHHHhccCcch-heeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHH
Confidence 122333344444555555555543 44567777776 56888999999999999999999999988888 6677777777
Q ss_pred HHHHhh
Q psy10294 161 ITGIGF 166 (226)
Q Consensus 161 ~~~i~~ 166 (226)
+..++.
T Consensus 389 ~~~~a~ 394 (417)
T COG2223 389 FYLVAL 394 (417)
T ss_pred HHHHHH
Confidence 766665
No 167
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.66 E-value=7.8e-07 Score=75.86 Aligned_cols=150 Identities=10% Similarity=-0.021 Sum_probs=108.6
Q ss_pred cccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 13 RPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
....|.+.+.++++. ++.........+..+.++..+++.+|+|+|+.++.+..++++....... . .......+.+
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~p-A---a~~~~y~~FL 108 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWP-A---ASSKSYGFFL 108 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh-h---hhhhhHHHHH
Confidence 356788888899998 7888888999999999999999999999999999999999983333221 0 1222222222
Q ss_pred HHHHHHHHhccc-cchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------------------hch
Q psy10294 92 FCICFWISGYGI-LALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW-------------------FGL 151 (226)
Q Consensus 92 ~~~~~~~~~~~~-~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~g~ 151 (226)
..++..+.|.+. ......+++.+.|++....-+.+.+.++.+|..++|.+...+..+ -.+
T Consensus 109 ~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v 188 (422)
T COG0738 109 VALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSV 188 (422)
T ss_pred HHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhh
Confidence 222333333333 244456888999998888889999999999999999998887662 125
Q ss_pred hhHHHHHHHHHHHhh
Q psy10294 152 HGTLFIYSFITGIGF 166 (226)
Q Consensus 152 ~~~~~~~~~~~~i~~ 166 (226)
+.++...+....+..
T Consensus 189 ~~pYl~~~~~lvll~ 203 (422)
T COG0738 189 QFPYLILAGLLVLLA 203 (422)
T ss_pred hhHHHHHHHHHHHHH
Confidence 666776666655544
No 168
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.66 E-value=3.9e-07 Score=81.21 Aligned_cols=136 Identities=10% Similarity=0.097 Sum_probs=93.6
Q ss_pred ceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 10 VSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
+...++.|.++++ .|.+. +.+.......+...+++++.|++.||+|||+.+..+..+..+....... .....+.+.
T Consensus 276 ~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~--~~~~~~~~~ 353 (495)
T PRK14995 276 VGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAM--TDFSTQQWQ 353 (495)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH--hcCCCchHH
Confidence 3445677877776 68887 6777788888889999999999999999999888777766553322222 111122222
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW 148 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (226)
......+.+.+.+... +.....+.+..|+++|+.+.++.+....+|+.+++.+.+.+.++
T Consensus 354 ~~~~~~l~G~g~g~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 354 AWGLMALLGFSAASAL-LASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHhHHHHH-HHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223333333333222 33345666889999999999999999999999999888877653
No 169
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.64 E-value=1.6e-06 Score=74.61 Aligned_cols=147 Identities=10% Similarity=-0.044 Sum_probs=94.8
Q ss_pred ecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 12 MRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 12 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
...+.|.+.++.|.+. +.........+...+..++.+++.||+|+|+.+..+.+...+....... .++.+....
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~ 298 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGS-----TTALPWLIV 298 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh-----hhhHHHHHH
Confidence 4456677777888886 5566666677778888899999999999999988887776663332222 122233333
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAI-NSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
...+.+...+.. .+....+..+. +++++++..+..... ..++..+++.+.+.+.+.+|+ ..++..+.+..+..
T Consensus 299 ~~~l~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 299 IQILHCGTFTVC-HLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 333333333322 23333456665 566678888877633 456678999999999999887 45665555555443
No 170
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.64 E-value=8.5e-07 Score=76.78 Aligned_cols=145 Identities=16% Similarity=0.134 Sum_probs=83.7
Q ss_pred HHHHhhcCCCc-hHHHHHHHHH-HHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHH
Q psy10294 17 VEIFQTFGVPL-KSEWVLVLTG-VLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCI 94 (226)
Q Consensus 17 ~~~~~~~g~~~-~~~~~~~~~~-~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (226)
|.+.++.|.+. +..+.....+ ...+++.++++++.||+|||+.+..+..+..+..+........ ..+.+........
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~-~~~~~~~~~~~~~ 312 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT-PKHLWTMALAIGI 312 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHH
Confidence 34445578876 3444443333 4578899999999999999998876666655422222110111 1122222222211
Q ss_pred ---HHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 95 ---CFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 95 ---~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
..+.......+....+++|.+|.+.+ ++.+....++...++.+.+.+.+++||+..|...+.+..+..
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~ 383 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGL 383 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 11111111223344566677775554 444445566666667788899999999988888777776654
No 171
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.63 E-value=1.6e-06 Score=72.71 Aligned_cols=140 Identities=12% Similarity=0.165 Sum_probs=93.5
Q ss_pred eecccHHHHHhh---cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 11 SMRPYLVEIFQT---FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 11 ~~~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
++..|.+.++++ +|++. +..........+..+|.++.+++.||+|+|+.+.++..+..+..+.... .. ..
T Consensus 158 ~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~-----~~-~~ 231 (310)
T TIGR01272 158 SAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL-----TH-GY 231 (310)
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-----cC-CH
Confidence 345677788864 47776 5667778888889999999999999999999888777766664332222 11 12
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHH
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYS 159 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 159 (226)
.....+...+.+.+ ...|.......|.+|++ .+++.++. ..+.+|+.+.|.+.+.+.|..|.+.++++..
T Consensus 232 ~~~~~~~l~g~~~s-~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 232 VAMWFVLALGLFNS-IMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 22222222222222 23355556666777754 45666664 5677899999999999999888877766433
No 172
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.62 E-value=1.1e-07 Score=83.05 Aligned_cols=162 Identities=10% Similarity=0.101 Sum_probs=98.9
Q ss_pred cccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhc----ccCChHHHH-HHHHHHHHHHHHHHHHhhcCCCc-
Q psy10294 13 RPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVN----KFGKRPMSL-WSTGICFVFTIALAICSMNLHWP- 84 (226)
Q Consensus 13 ~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d----~~Grr~~~~-~~~~~~~i~~~~~~~~~~~~~~~- 84 (226)
..|++.++.+ .|++. ..+.......+...+..++.|.++| |+|||+..+ ++.+...+....++.....+...
T Consensus 21 ~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 21 SSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 3455555554 68887 5566666777777888889999999 899877765 45555555433333300100011
Q ss_pred -hH-HHHHHHHHHHHHHhccccchhhHHhhccCC-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-------chhhH
Q psy10294 85 -GW-IPLTIFCICFWISGYGILALPWMLMSEIFP-VRIRGVACGICAAINSIVCFLVTKTYVTSITWF-------GLHGT 154 (226)
Q Consensus 85 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~ 154 (226)
.. +.......+.........| ..++.+|+.+ +++|.+..+....+..+|..+...+.+.+.+.. +|+..
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~-~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~ 179 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIP-YNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWM 179 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCc-hhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHH
Confidence 11 1122222222222222112 2457889987 578999999988888888877766666655443 46777
Q ss_pred HHHHHHHHHHhhhhhhcccccccccceeEEEEecc
Q psy10294 155 LFIYSFITGIGFAIRIRGVACGICAAINSIVCFLV 189 (226)
Q Consensus 155 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~e 189 (226)
..+.+++..+.. ++..+..+|
T Consensus 180 ~~v~~iv~~v~~--------------~i~~~~~ke 200 (428)
T PF13347_consen 180 ALVLAIVGLVFF--------------LITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHHh--------------hhhhheeee
Confidence 777777777766 666666777
No 173
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.60 E-value=6.5e-07 Score=77.47 Aligned_cols=138 Identities=9% Similarity=-0.103 Sum_probs=83.9
Q ss_pred ccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 14 PYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 14 ~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
.+.|.+++ +.|.+. +..+......++..++.++.++++||+|||+.+..+.....+................+.....
T Consensus 236 ~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK15402 236 ALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAG 315 (406)
T ss_pred HHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 34566654 467776 4455555566678889999999999999999988877665552222221010111112222222
Q ss_pred HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh
Q psy10294 92 FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHG 153 (226)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 153 (226)
......+.+.. .+...... ...++++||+..+..+....++..+++.+.+.+.+..++..
T Consensus 316 ~~~~g~g~~~~-~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 375 (406)
T PRK15402 316 LSLYAFGIGLA-NAGLYRLT-LFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGL 375 (406)
T ss_pred HHHHHHHHHHH-hhhHHHHH-hhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Confidence 22222222221 12222233 23345889999999999999999999999888877767644
No 174
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.57 E-value=4.2e-07 Score=77.17 Aligned_cols=121 Identities=10% Similarity=0.026 Sum_probs=74.7
Q ss_pred ceecccHHHHHhhcCCCc-hHHHHHHHHH-HHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCC-----
Q psy10294 10 VSMRPYLVEIFQTFGVPL-KSEWVLVLTG-VLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLH----- 82 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~-~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~----- 82 (226)
+....+.|.+.++.|.+. +......... +..+++.++++++.||+|||+.+..+.++..+..........+.+
T Consensus 226 ~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (356)
T TIGR00901 226 SAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGIT 305 (356)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Confidence 345567788888888876 4344444434 567889999999999999999988877776653222221000100
Q ss_pred -CchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHH
Q psy10294 83 -WPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAIN 131 (226)
Q Consensus 83 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~ 131 (226)
...+...........+.+ ...+....+.+|.+|+++||+..|+.+...
T Consensus 306 ~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 306 FPHLLMLFLTITLEAVTGG-LGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred cchHHHHHHHHHHHHHHhH-HHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 111222222222222222 234556778999999999999999887654
No 175
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.56 E-value=5.2e-07 Score=87.83 Aligned_cols=129 Identities=10% Similarity=0.007 Sum_probs=85.1
Q ss_pred ecccHHHHHh-hcCCCch--HHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 12 MRPYLVEIFQ-TFGVPLK--SEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 12 ~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
...++|.+.+ .+|.+.. ..+......++.++++++.+++.||+++|+.+.++.++.++..+.... ....+..
T Consensus 251 ~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 325 (1146)
T PRK08633 251 AQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPT-----APSLASV 325 (1146)
T ss_pred HHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHH-----hhhHHHH
Confidence 3445666664 4677653 456667778888999999999999999998887777766653333333 1122222
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI 146 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (226)
+....+.+.+.+. ..+....++.|..|++.||++.|+.+....++..+++.+...+.
T Consensus 326 ~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 326 LVLFFLFGFSAGL-FIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred HHHHHHHHHHHHH-hhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222222 23345578889999999999999999988888877766655443
No 176
>PRK11462 putative transporter; Provisional
Probab=98.56 E-value=1.3e-06 Score=77.22 Aligned_cols=154 Identities=12% Similarity=0.110 Sum_probs=91.5
Q ss_pred eecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcc----cCChHHHH-HHHHHHHHHHHHHHHHhhcCCC
Q psy10294 11 SMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNK----FGKRPMSL-WSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~----~Grr~~~~-~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
.+..|+..++.+ .|++. ..+....+.-+...+..++.|.++|| +|||+..+ ++.+...+....++. ......
T Consensus 27 ~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~-~p~~s~ 105 (460)
T PRK11462 27 NVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYS-TPDLSM 105 (460)
T ss_pred HHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHh-CCCCCc
Confidence 445567766665 68887 56667777778888999999999996 68876665 454555553333332 111011
Q ss_pred ch-H-HHHHHHHHHHHHHhccccchhhHHhhccCC-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-------chhh
Q psy10294 84 PG-W-IPLTIFCICFWISGYGILALPWMLMSEIFP-VRIRGVACGICAAINSIVCFLVTKTYVTSITWF-------GLHG 153 (226)
Q Consensus 84 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~ 153 (226)
.. . +......++..++.....| -.++.+|+.+ +++|++..++-..++.+|..+++.+...+.+.. +|+.
T Consensus 106 ~~~~~y~~~~~~~~~~~~t~~~ip-y~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~ 184 (460)
T PRK11462 106 NGKMIYAAITYTLLTLLYTVVNIP-YCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQG 184 (460)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 11 1 1222222222222222222 2357778876 799999999999888888877766655444443 3555
Q ss_pred HHHHHHHHHHHhh
Q psy10294 154 TLFIYSFITGIGF 166 (226)
Q Consensus 154 ~~~~~~~~~~i~~ 166 (226)
...+++++..+..
T Consensus 185 ~~~i~~ii~~i~~ 197 (460)
T PRK11462 185 GIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555554444
No 177
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.56 E-value=4.6e-07 Score=79.15 Aligned_cols=155 Identities=15% Similarity=0.090 Sum_probs=102.5
Q ss_pred ccceecccHHHHHh-hcC----CCc-hHHHHHHHHHHHHHHHHHHHHHHhccc-CChHHHHHHHHHHHHHHHHHHHHhhc
Q psy10294 8 SFVSMRPYLVEIFQ-TFG----VPL-KSEWVLVLTGVLAITGSLVSSLTVNKF-GKRPMSLWSTGICFVFTIALAICSMN 80 (226)
Q Consensus 8 ~~~~~~~~~~~~~~-~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~-Grr~~~~~~~~~~~i~~~~~~~~~~~ 80 (226)
++|.+...+..++. +.+ +|. ++.-....+....-...+++||++||+ |+|+.+..+.++..+.-+.+....
T Consensus 36 syYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~-- 113 (498)
T COG3104 36 SYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS-- 113 (498)
T ss_pred hhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc--
Confidence 45555544444443 334 665 444444455555567788999999995 999999999999888433333300
Q ss_pred CCCchHHHHHHHHHHHHHHhccccchhhHHhhccCCc--chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q psy10294 81 LHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPV--RIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIY 158 (226)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~--~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (226)
........+.+.....+.| ..-+.+..++.|++|+ ..|..+.++.++..++|++++|.+.+++.++.||+..|-..
T Consensus 114 -~~~~~gl~i~L~~I~iG~G-l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~a 191 (498)
T COG3104 114 -VSGPGGLYIGLALIIVGTG-LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLA 191 (498)
T ss_pred -cccccHHHHHHHHHHhccc-cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence 0112222222222223322 2346666789999876 23777888889999999999999999999999999888877
Q ss_pred HHHHHHhh
Q psy10294 159 SFITGIGF 166 (226)
Q Consensus 159 ~~~~~i~~ 166 (226)
++-..++.
T Consensus 192 avGm~~gl 199 (498)
T COG3104 192 AVGMIIGL 199 (498)
T ss_pred HHHHHHHH
Confidence 77666665
No 178
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.56 E-value=3e-06 Score=73.61 Aligned_cols=137 Identities=16% Similarity=0.070 Sum_probs=95.8
Q ss_pred ecccHHHHHhhcC-CCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH-HHHHHHHHhhcCCCchHHH
Q psy10294 12 MRPYLVEIFQTFG-VPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV-FTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 12 ~~~~~~~~~~~~g-~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~ 88 (226)
...|.+.+.++.| .+. .......+..+..++.-...+++..|+|-|++++++.+..++ ..+.... ..+.+..
T Consensus 226 ~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~-----~~~~~~~ 300 (400)
T PF03825_consen 226 YYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF-----SDPWPFI 300 (400)
T ss_pred HHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh-----cCCcHHH
Confidence 4556777888877 554 344445566777888899999999999999999999999888 4333222 1233322
Q ss_pred HHHHH----HHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhchhhH
Q psy10294 89 LTIFC----ICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAI-NSIVCFLVTKTYVTSITWFGLHGT 154 (226)
Q Consensus 89 ~~~~~----~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~ 154 (226)
..... ..+..++... .....|+.|..|++.|+++.++.... ..+|..+++.+.+++.+++|.+..
T Consensus 301 ~~~~~l~q~lhG~tf~~~~-~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~ 370 (400)
T PF03825_consen 301 VALQLLGQLLHGLTFGLFH-AASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGM 370 (400)
T ss_pred HHHHHHHHhhhhHHHHHHH-HHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhh
Confidence 22222 2333333222 34456899999999999999988765 568999999999999998875543
No 179
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.53 E-value=9e-07 Score=76.15 Aligned_cols=134 Identities=14% Similarity=0.149 Sum_probs=80.5
Q ss_pred ccHHHHH-hhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 14 PYLVEIF-QTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 14 ~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
.+.|.+. +++|.+. +.........+..+++.++.+++.||+|||+.+..+.....+....... ....+.....
T Consensus 224 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 298 (392)
T PRK10473 224 NTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLAL-----SPSHAVSLFG 298 (392)
T ss_pred HhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH
Confidence 3345555 4568876 4556667778888999999999999999999988887776663333333 1112222222
Q ss_pred HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q psy10294 92 FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIY 158 (226)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (226)
......+.+.+.. .....+..|.+.|+ +..+....++..+++.+.+++.+++|+.......
T Consensus 299 ~~l~~~g~~~~~~---~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~ 359 (392)
T PRK10473 299 ITLICAGFSVGFG---VAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLI 359 (392)
T ss_pred HHHHHHHHHHHhH---HHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH
Confidence 2222222222221 12344566665554 4445555677777888888888888875433333
No 180
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.52 E-value=1e-06 Score=78.04 Aligned_cols=154 Identities=12% Similarity=0.105 Sum_probs=87.1
Q ss_pred ceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhc----ccCChH-HHHHHHHHHHHHHHHHHHHhhcCC
Q psy10294 10 VSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVN----KFGKRP-MSLWSTGICFVFTIALAICSMNLH 82 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d----~~Grr~-~~~~~~~~~~i~~~~~~~~~~~~~ 82 (226)
..+..|++.++.+ .|++. ..+....+..+...+..++.|.++| |+|||+ .++++.+.+.+.....+. . .+.
T Consensus 23 ~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~-~-p~~ 100 (473)
T PRK10429 23 GIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFS-A-HLF 100 (473)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHc-C-CCC
Confidence 3445677777766 59887 6677777788888999999999999 569955 445566555553322222 1 111
Q ss_pred Cch--HH-HHHHHHHHHHHHhccccchhhHHhhccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-------ch
Q psy10294 83 WPG--WI-PLTIFCICFWISGYGILALPWMLMSEIF-PVRIRGVACGICAAINSIVCFLVTKTYVTSITWF-------GL 151 (226)
Q Consensus 83 ~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~ 151 (226)
... .. ......+...++.....| ..++.+|+. ++++|.+..+....+..+++.+.+.+...+.+.. +|
T Consensus 101 ~~~~~~~~~~~~~~l~~~~~t~~~ip-~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~ 179 (473)
T PRK10429 101 EGTAQYVFVCVTYILWGMTYTIMDIP-FWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGF 179 (473)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHcch-HHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhH
Confidence 111 11 111112222222222112 235778988 5899999988877767776666554443332222 34
Q ss_pred hhHHHHHHHHHHHhh
Q psy10294 152 HGTLFIYSFITGIGF 166 (226)
Q Consensus 152 ~~~~~~~~~~~~i~~ 166 (226)
+....+.+++..+..
T Consensus 180 ~~~~~i~~~~~~~~~ 194 (473)
T PRK10429 180 QMFTLVLIAFFIVST 194 (473)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444445555544443
No 181
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.50 E-value=9.8e-07 Score=78.23 Aligned_cols=144 Identities=9% Similarity=-0.094 Sum_probs=86.3
Q ss_pred HHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccC-----ChHHHHHHHHHHH-HHHHHHHHHhhcCCCchHHH
Q psy10294 16 LVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFG-----KRPMSLWSTGICF-VFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 16 ~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~G-----rr~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~ 88 (226)
.|.+.+++|++. +.+.......+...+-.+ +|+++||++ ||+.++.+.++.. +....... .......
T Consensus 49 ~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~-----~~~~~~~ 122 (468)
T TIGR00788 49 SPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPG-----KVSSAKV 122 (468)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhccc-----ccchHHH
Confidence 334445689987 555666666666666555 999999997 6676666665542 22111111 1111111
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHH---HHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHh
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACG---ICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 165 (226)
...................-.+..|..+ +.+..+.+ +......+|..+++.+.+.+.++++|+..+++.+.+.++.
T Consensus 123 ~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~ 201 (468)
T TIGR00788 123 AAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQ 201 (468)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHH
Confidence 1112222222233334455567789888 44444333 3333445788999999999999999999988888777666
Q ss_pred h
Q psy10294 166 F 166 (226)
Q Consensus 166 ~ 166 (226)
.
T Consensus 202 ~ 202 (468)
T TIGR00788 202 L 202 (468)
T ss_pred H
Confidence 4
No 182
>PRK11043 putative transporter; Provisional
Probab=98.49 E-value=4.8e-06 Score=71.89 Aligned_cols=136 Identities=18% Similarity=0.192 Sum_probs=83.0
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
....+.|.+.++.|.+. +.........+...++.+..+++.||+|||+..........+................+...
T Consensus 221 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (401)
T PRK11043 221 AWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLL 300 (401)
T ss_pred HHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHH
Confidence 34456788888888886 45555556667778899999999999999987765555544422221110000011222222
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW 148 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (226)
........+.+. ..+.......|..| ++|+++.|+.+.....++..++.+.+.+.+.
T Consensus 301 ~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 301 IPFCVMAAANGA-IYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 222222222222 23444445556666 5799999999998888888888888777654
No 183
>PRK11462 putative transporter; Provisional
Probab=98.49 E-value=2.4e-06 Score=75.54 Aligned_cols=117 Identities=11% Similarity=0.073 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHH
Q psy10294 31 WVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWML 110 (226)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (226)
.......+..+++.+++++++||+|||+.+..+..+..+..+.... .. ..............+ .......+..+.+
T Consensus 267 ~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~l~g-~~~~~~~~l~~~m 342 (460)
T PRK11462 267 AFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFF--VP-MQASITMFVFIFVIG-VLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH--hc-hhHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 4455667777889999999999999999877555444332222222 11 111112222222222 2222234555677
Q ss_pred hhccCC-----cchhh--hHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q psy10294 111 MSEIFP-----VRIRG--VACGICAAINSIVCFLVTKTYVTSITWFGL 151 (226)
Q Consensus 111 ~~e~~p-----~~~R~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 151 (226)
.+|..+ +.+|. ...+.......++..+++.+.+.+.+..|+
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 777755 22444 444555678889999998888887766554
No 184
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.49 E-value=6e-06 Score=71.46 Aligned_cols=146 Identities=12% Similarity=0.018 Sum_probs=88.4
Q ss_pred cccH-HHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 13 RPYL-VEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 13 ~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
..+. |.+.++.|.+. +.........++..++.++.+++.||.+| +.+..+..+.......... . ....+....
T Consensus 236 ~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~~~l~~-~---~~~~~~~~~ 310 (394)
T PRK10213 236 FTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAVSALVLTL-W---GSDKIVATG 310 (394)
T ss_pred HHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHH-H---hhhHHHHHH
Confidence 3444 66667788887 45666777888899999999999999644 4433333333322111111 0 122233332
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHh
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 165 (226)
.....+.+.+. ..+....++.+..|+ .+++..+.......++..+++.+.+.+.+..|++..+...+.+..+.
T Consensus 311 ~~~l~G~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 311 VAIIWGLTFAL-VPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHh-hhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 23333323322 223333456677774 46677777777888999999999999999888877666655544433
No 185
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.46 E-value=1.3e-06 Score=73.29 Aligned_cols=127 Identities=17% Similarity=0.260 Sum_probs=86.1
Q ss_pred ceecccHHHH-HhhcCCC-c-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 10 VSMRPYLVEI-FQTFGVP-L-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 10 ~~~~~~~~~~-~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
.....+.|.+ .+++|.+ . +.........+...++.++.+++.||+|+|+..........+....... ... ..+..
T Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~ 300 (352)
T PF07690_consen 223 SGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLL-LPF-SSSPV 300 (352)
T ss_dssp HHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC-SHH-HCHHH
T ss_pred HHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH-HHH-hhhHH
Confidence 3456778887 4567888 4 5566677888888899999999999999988877766666553332222 000 11122
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHH
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVT 139 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~ 139 (226)
.........+.+.+ ...+....+..|..|+++|+++.|+.+....+++.++|
T Consensus 301 ~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 301 WLIIALFLIGFGFG-IVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHH-HHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 22222233333222 23466677899999999999999999999999988876
No 186
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.43 E-value=1e-05 Score=71.01 Aligned_cols=118 Identities=18% Similarity=0.147 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH-HHHHHHHHHHHhccccchh
Q psy10294 29 SEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP-LTIFCICFWISGYGILALP 107 (226)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 107 (226)
............+++.++...+.+|+|||+.+.++.++..+.....++. +..+... ++..+....+.+ ...+++
T Consensus 274 ~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~----~~~~~~l~~~~~~i~~~g~~-~~~~l~ 348 (467)
T COG2211 274 AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFT----PAGSVVLIVVALIIAGVGTG-IANPLP 348 (467)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhh----cCcchHHHHHHHHHHHHHhh-cccccc
Confidence 3444555556666778999999999999999999988888854444441 1122222 222233333333 345789
Q ss_pred hHHhhccCC-------cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q psy10294 108 WMLMSEIFP-------VRIRGVACGICAAINSIVCFLVTKTYVTSITWFGL 151 (226)
Q Consensus 108 ~~~~~e~~p-------~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 151 (226)
|.+++|.-+ .|.-|...+....+..++..++..+.++..+..|+
T Consensus 349 wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 349 WAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999998843 45556677788888889999999888888877653
No 187
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.43 E-value=4.9e-06 Score=70.22 Aligned_cols=155 Identities=13% Similarity=0.089 Sum_probs=103.7
Q ss_pred cccccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc-CChHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy10294 5 FNSSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF-GKRPMSLWSTGICFVFTIALAICSMNLH 82 (226)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 82 (226)
|...+|++..|+|.++.|.|+|. ++++..+...+.+.+.++..-.+.+|. ++|+........+.+..++..+ . +
T Consensus 220 qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~-~---P 295 (395)
T COG2807 220 QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLL-A---P 295 (395)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH-h---h
Confidence 45667888899999999999998 788888999999999999999999975 4566666555555554444433 0 1
Q ss_pred CchHHHHHHHHHHHHHHhccccchhhHHhhc-cCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHH
Q psy10294 83 WPGWIPLTIFCICFWISGYGILALPWMLMSE-IFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTLFIYSF 160 (226)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~ 160 (226)
....... ...++.+.+. .-+..-+.+.+ .-.+++-+.-.++.+.++++....+|++.+++.|..| |+..+.....
T Consensus 296 ~~~~~lw--~~llG~G~G~-~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~ 372 (395)
T COG2807 296 GQLPILW--ALLLGLGQGG-AFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLAL 372 (395)
T ss_pred hhHHHHH--HHHHhCccch-HHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHH
Confidence 1122222 1222222221 22343344444 3455667777889999999999999999999998775 6655555555
Q ss_pred HHHHhh
Q psy10294 161 ITGIGF 166 (226)
Q Consensus 161 ~~~i~~ 166 (226)
......
T Consensus 373 ~~i~m~ 378 (395)
T COG2807 373 ATLLML 378 (395)
T ss_pred HHHHHH
Confidence 554443
No 188
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.43 E-value=1.6e-05 Score=67.21 Aligned_cols=145 Identities=13% Similarity=0.192 Sum_probs=85.7
Q ss_pred ccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHH
Q psy10294 14 PYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIF 92 (226)
Q Consensus 14 ~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 92 (226)
+|.-.++++.|++. +.............+...+.|.++||+|||+..+..+++..+..+.. +.++...+..-
T Consensus 55 pY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-------~~~~~~~L~~G 127 (354)
T PF05631_consen 55 PYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-------HSSNYPVLLLG 127 (354)
T ss_pred chhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-------hccccHHHHHH
Confidence 44445566778887 55666667777778888899999999999999887777776643322 22344444444
Q ss_pred HHHHHHHhccccch--hhHHhhcc----CCcchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhch--hhHHHHHHHHHH
Q psy10294 93 CICFWISGYGILAL--PWMLMSEI----FPVRIRGVACGICA-AINSIVCFLVTKTYVTSITWFGL--HGTLFIYSFITG 163 (226)
Q Consensus 93 ~~~~~~~~~~~~~~--~~~~~~e~----~p~~~R~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~ 163 (226)
.++++....-..+. .| ++.|. +|++..+...+... ..+.+..+.+..+...+.++.+. ..+|..-..+..
T Consensus 128 RvlgGiaTSLLfS~FEsW-~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~ 206 (354)
T PF05631_consen 128 RVLGGIATSLLFSAFESW-MVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLA 206 (354)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHH
Confidence 44433332222221 24 45565 45554444444444 23445556666666666776654 556666555555
Q ss_pred Hhh
Q psy10294 164 IGF 166 (226)
Q Consensus 164 i~~ 166 (226)
+..
T Consensus 207 ~~~ 209 (354)
T PF05631_consen 207 VAA 209 (354)
T ss_pred HHH
Confidence 554
No 189
>KOG2504|consensus
Probab=98.42 E-value=2.7e-07 Score=82.45 Aligned_cols=154 Identities=16% Similarity=0.178 Sum_probs=112.9
Q ss_pred cccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCC--hHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10294 7 SSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGK--RPMSLWSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Gr--r~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
.+......++|.+.++.+++. +.....++.++..+++-++.|+++|+... +....++.++..+..+.... .
T Consensus 312 ~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~------~ 385 (509)
T KOG2504|consen 312 LGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPF------A 385 (509)
T ss_pred HHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHH------h
Confidence 345566778899999999988 77888899999999999999999999883 44445555555553333333 2
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTLFIYSFIT 162 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~ 162 (226)
..+..+...+.+.+.............+.|+.+.+.-..+.|+...+..++..++|++.+.+.+..| |...|+..+...
T Consensus 386 ~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~ 465 (509)
T KOG2504|consen 386 TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCF 465 (509)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHH
Confidence 3334444444444443334445555678899999999999999999999999999999998888777 766777777766
Q ss_pred HHhh
Q psy10294 163 GIGF 166 (226)
Q Consensus 163 ~i~~ 166 (226)
+++.
T Consensus 466 ~~s~ 469 (509)
T KOG2504|consen 466 LLSA 469 (509)
T ss_pred HHHH
Confidence 6664
No 190
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.42 E-value=1.8e-06 Score=75.34 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=46.6
Q ss_pred cceecccHHHHH-hhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCC-hHHHHHHHHHHHH
Q psy10294 9 FVSMRPYLVEIF-QTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGK-RPMSLWSTGICFV 69 (226)
Q Consensus 9 ~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Gr-r~~~~~~~~~~~i 69 (226)
.....++++.++ ++.|++. +.++......++..+++++.|.++||+|| |+.+..+..+..+
T Consensus 18 ~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~ 81 (418)
T TIGR00889 18 WGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGAL 81 (418)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 334445555555 4589988 77899999999999999999999999965 6677766666655
No 191
>PRK10133 L-fucose transporter; Provisional
Probab=98.42 E-value=4.7e-06 Score=73.25 Aligned_cols=141 Identities=13% Similarity=0.046 Sum_probs=92.1
Q ss_pred cccHHHHH-h-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 13 RPYLVEIF-Q-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 13 ~~~~~~~~-~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
..|.+.+. + ..|.+. +.........++..+|.++++++.||+|||+++..+..+..+....... ... ....
T Consensus 278 ~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~-----~~~-~~~~ 351 (438)
T PRK10133 278 WSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF-----AGG-HVGL 351 (438)
T ss_pred HHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-----cCC-hHHH
Confidence 34566553 4 468887 6677788889999999999999999999999988877666553322222 111 1222
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHH
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG-LHGTLFIYSFIT 162 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~ 162 (226)
..+...+.+.+. ..|..+....|.+|++ .+++.++... ..+++.+.+.+.+.+.+..| -+..+++.....
T Consensus 352 ~~~~l~glg~~~-i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~ 422 (438)
T PRK10133 352 IALTLCSAFMSI-QYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCF 422 (438)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 223333333332 3466666777877754 5677777653 45678888889898888877 666666544433
No 192
>PRK10054 putative transporter; Provisional
Probab=98.42 E-value=3.3e-06 Score=73.08 Aligned_cols=128 Identities=10% Similarity=-0.013 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHHh
Q psy10294 32 VLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWMLM 111 (226)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (226)
......+.........+.+.||.++|+.+..+..+..+....... . .++.+...........+. ....|....++
T Consensus 249 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~g~-~~~~p~~~~~~ 323 (395)
T PRK10054 249 VLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIF-S---GNSLLLWGMSAAVFTVGE-IIYAPGEYMLI 323 (395)
T ss_pred HHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHH-c---chHHHHHHHHHHHHHHHH-HHHHhhHHHHH
Confidence 333444444555678889999999999888777666553322222 0 112222222222222222 12234556678
Q ss_pred hccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHh
Q psy10294 112 SEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 112 ~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 165 (226)
.|..|++.|++..+..+ ...+|..++|.+.+.+.++.|....+++.+....+.
T Consensus 324 ~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~ 376 (395)
T PRK10054 324 DHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAA 376 (395)
T ss_pred HHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHH
Confidence 89999999999988654 566899999999999999998776666655554444
No 193
>KOG0255|consensus
Probab=98.41 E-value=9.1e-06 Score=72.82 Aligned_cols=116 Identities=16% Similarity=0.235 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhh
Q psy10294 29 SEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPW 108 (226)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (226)
........+.....+....+...|++|||.....+..+..+..+.... .... ...+...........+.+.+.... +
T Consensus 352 ~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~ 428 (521)
T KOG0255|consen 352 IYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGW-LPDD-LGGWLHWILPLLGKFFIGSAFNLI-F 428 (521)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-hhcc-chhHHHHHHHHHHHHHHHHHHHHH-H
Confidence 344455555577788888899999999999999988888874444333 1111 111123333333334444444444 7
Q ss_pred HHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 109 MLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT 147 (226)
Q Consensus 109 ~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (226)
.+.+|.+|+..|+.+.+.......+++.++|.+......
T Consensus 429 ~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 429 LYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 899999999999999999999999999999988654443
No 194
>PRK09669 putative symporter YagG; Provisional
Probab=98.41 E-value=5.8e-06 Score=72.59 Aligned_cols=116 Identities=14% Similarity=0.238 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHHh
Q psy10294 32 VLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWMLM 111 (226)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (226)
......+..+++.+++++++||+|||+.+.++..+..+....... .. ..+.+.......+.+.+. ....+..+.++
T Consensus 269 ~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~i~g~~~-~~~~~~~~am~ 344 (444)
T PRK09669 269 FLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFF--IP-PSNVWLIFALNILFNFIQ-NLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH--hC-cchHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 334445666788889999999999999998877665542222222 11 112222222222222222 23446778888
Q ss_pred hccCC-------cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q psy10294 112 SEIFP-------VRIRGVACGICAAINSIVCFLVTKTYVTSITWFGL 151 (226)
Q Consensus 112 ~e~~p-------~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 151 (226)
+|..+ .+..|...+.......++..+++.+.+.+.+..|+
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88875 34456667888888899999999999988887765
No 195
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.39 E-value=3.8e-06 Score=71.69 Aligned_cols=126 Identities=15% Similarity=0.150 Sum_probs=72.2
Q ss_pred cccHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 13 RPYLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 13 ~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
..+.|.++. +.|.+. +.........+...++.++.+++.||+|||+.+..+..+..+..+........ +...+....
T Consensus 214 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 292 (377)
T PRK11102 214 LTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL-DLGFWALVV 292 (377)
T ss_pred HHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHH
Confidence 334455554 468876 56677778888889999999999999999999888877655422211110000 111122222
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHH-HHHHHHHHH
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINS-IVCFLVTKT 141 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~-~~~~~~~~~ 141 (226)
.........+ ...+....+..|..| +.|+++.++.+.... ++..+++.+
T Consensus 293 ~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 293 GVAAFVGCVS-MISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHHHHHHHH-HhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222 122223345667766 789999988766543 444444444
No 196
>KOG4686|consensus
Probab=98.39 E-value=1.4e-06 Score=71.45 Aligned_cols=127 Identities=16% Similarity=0.135 Sum_probs=89.7
Q ss_pred HHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH-HHHHHHHHhhcCCCchHHHHHHH
Q psy10294 16 LVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV-FTIALAICSMNLHWPGWIPLTIF 92 (226)
Q Consensus 16 ~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~ 92 (226)
-|.++++ +|++. ++....+.....+.+.+++.|.++||+||+...+.+..+..+ .=....+ +..+++....++
T Consensus 287 g~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F----t~lsPy~~m~~l 362 (459)
T KOG4686|consen 287 GPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF----TFLSPYTSMTFL 362 (459)
T ss_pred hHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh----hhccHHHHHHHH
Confidence 4555554 89998 666677777777888999999999999999888776666555 2112222 124455444433
Q ss_pred HHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10294 93 CICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG 150 (226)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 150 (226)
.+..-. .....|..++-+.|.++-|++.|+++...++|-.+.|.+.+.+.+.-|
T Consensus 363 GLsysl----lAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 363 GLSYSL----LACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred hhhHHH----HHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 322111 122356677788899999999999999999999999999998887654
No 197
>KOG2816|consensus
Probab=98.37 E-value=2.1e-06 Score=75.77 Aligned_cols=131 Identities=10% Similarity=0.132 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHHhhccC
Q psy10294 36 TGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWMLMSEIF 115 (226)
Q Consensus 36 ~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 115 (226)
.++..++.++..|.++||+|||..+......+.+-.....+ ..++.+..... .+++. ...+....+++|..
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~-------~~~~~~~~~~l-~g~~~-~~~s~~~a~vadis 141 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF-------QGYWFFLLLGL-SGGFS-AIFSVGFAYVADIS 141 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH-------HHHHHhhhccc-ccchh-hhhhhhhhheeecc
Confidence 46677888999999999999999999988888873333333 11333222122 11211 23345667899999
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhhhhhhcccccccccceeEEEEecc
Q psy10294 116 PVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGFAIRIRGVACGICAAINSIVCFLV 189 (226)
Q Consensus 116 p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~e 189 (226)
..+.|....|+.......+..++|...+.+.+..|.-..+.+..+...+.. +...+++||
T Consensus 142 ~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~--------------~y~~~~l~E 201 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSL--------------LYMLLFLPE 201 (463)
T ss_pred chhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHH--------------HHHhhcccc
Confidence 999999999999999999999999999999998888778888888777777 777788899
No 198
>KOG2532|consensus
Probab=98.37 E-value=2.5e-06 Score=75.41 Aligned_cols=158 Identities=16% Similarity=0.178 Sum_probs=106.5
Q ss_pred cccccccceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCCh--------H-HHHHHHHHHHHHH
Q psy10294 3 PGFNSSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKR--------P-MSLWSTGICFVFT 71 (226)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr--------~-~~~~~~~~~~i~~ 71 (226)
++.+.+.+.+..|+|+++++ +|++. +.++.+++..+.+.+..+++|.++||.-+| | .-.++..+.+++.
T Consensus 268 f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l 347 (466)
T KOG2532|consen 268 FGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFL 347 (466)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHH
Confidence 34566778889999999987 78888 778999999999999999999999987552 2 2223333333333
Q ss_pred HHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHHhhccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH---
Q psy10294 72 IALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWMLMSEIF-PVRIRGVACGICAAINSIVCFLVTKTYVTSIT--- 147 (226)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 147 (226)
+.+.+ .. ....+..+.++.......+..... .+.+-.- .++.-+..+|+.+....+.++++|.+.+.+.+
T Consensus 348 ~~l~~--~~-~~~~~~a~~~l~~~~~~~g~~~~G---f~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t 421 (466)
T KOG2532|consen 348 LVLAF--TS-DEHRLLAVILLTIAIGLSGFNISG---FYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNT 421 (466)
T ss_pred Heeee--cC-CCcchHHHHHHHHHHHHcccchhh---hHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCC
Confidence 22222 11 112233333333333333222211 2333333 56778999999999999999999999888773
Q ss_pred hhchhhHHHHHHHHHHHhh
Q psy10294 148 WFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 148 ~~g~~~~~~~~~~~~~i~~ 166 (226)
...|+..|++.+++.++..
T Consensus 422 ~~eW~~VF~i~a~i~~~~~ 440 (466)
T KOG2532|consen 422 REEWRIVFLIAAGILIVGN 440 (466)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3479999999998888876
No 199
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.37 E-value=5.4e-06 Score=80.92 Aligned_cols=148 Identities=13% Similarity=0.009 Sum_probs=93.9
Q ss_pred eecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhh---------
Q psy10294 11 SMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSM--------- 79 (226)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~--------- 79 (226)
.+..++|.+.++ +|.+. ...+......++.++|+++.++++|+.++++.+..+.++..+..+.......
T Consensus 243 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (1140)
T PRK06814 243 VVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQL 322 (1140)
T ss_pred HHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccc
Confidence 344567887766 68776 6677788889999999999999999888777655555444442221111000
Q ss_pred ------cCCCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hhchh
Q psy10294 80 ------NLHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT-WFGLH 152 (226)
Q Consensus 80 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~ 152 (226)
......+...+...+++.+.+ ...+...+++.+..|++.||++.|+.+....++..+++.+.+.+.+ ..+..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~ 401 (1140)
T PRK06814 323 KSILVFLSKRHGWRILIDLFGLAAAGG-LYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIP 401 (1140)
T ss_pred cchhhhhcccccHHHHHHHHHHHHHHH-HhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHH
Confidence 000222322222222222222 2333456788899999999999999999999999999988887764 33444
Q ss_pred hHHHHHH
Q psy10294 153 GTLFIYS 159 (226)
Q Consensus 153 ~~~~~~~ 159 (226)
..+++.+
T Consensus 402 ~~~~~~~ 408 (1140)
T PRK06814 402 WIILFIA 408 (1140)
T ss_pred HHHHHHH
Confidence 4444333
No 200
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.36 E-value=1.6e-05 Score=68.97 Aligned_cols=130 Identities=11% Similarity=-0.036 Sum_probs=78.6
Q ss_pred ccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 14 PYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTV-NKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 14 ~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~-d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
.+.|.+.++.+.+. +..+......+....+....+.+. ||++.|+.+..+..+..+....... .+..+.....
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~ 303 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGM-----VSNLQQLFTL 303 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHH
Confidence 45677777754444 445555555555554444445555 4566666666666555543322222 1122222222
Q ss_pred HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10294 92 FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWF 149 (226)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (226)
......+.+ ...+....++.|..|++.||++.|+.+....++..++|.+.+.+.++.
T Consensus 304 ~~l~~~g~~-~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 304 ICLFYIGSI-IAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred HHHHHHHHH-HHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHH
Confidence 222222222 223444567889999999999999999999999999999999998874
No 201
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.35 E-value=6.7e-06 Score=71.86 Aligned_cols=140 Identities=17% Similarity=0.241 Sum_probs=94.5
Q ss_pred ccceecccHHHHHhh-cCCCchHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q psy10294 8 SFVSMRPYLVEIFQT-FGVPLKSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGW 86 (226)
Q Consensus 8 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (226)
+........+++.++ .+.+...........+..+++.++.++++||+|||+.+..+..+..+......... ..+.+
T Consensus 240 ~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 316 (428)
T PF13347_consen 240 AFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG---PGSPW 316 (428)
T ss_pred hhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH---hhhHH
Confidence 333444455666655 45444445566677888899999999999999999999999999888444333311 12333
Q ss_pred HHHHHHHHHHHHHhccccchhhHHhhccCCc-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q psy10294 87 IPLTIFCICFWISGYGILALPWMLMSEIFPV-------RIRGVACGICAAINSIVCFLVTKTYVTSITWFGL 151 (226)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 151 (226)
.........+.+.+ .....++.+.+|+.+. +..|...|+......++..+++.+.+.+.+..|+
T Consensus 317 ~~~i~~~l~gi~~~-~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 317 LVLILFILAGIGYG-AFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHHHHHHhHhhhc-ccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 33333333333333 3446777888898763 4467888888889999999999988887776554
No 202
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.25 E-value=2.9e-06 Score=71.98 Aligned_cols=122 Identities=18% Similarity=0.269 Sum_probs=75.5
Q ss_pred ceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 10 VSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
+.+..+.|.+.++ +|.+. +.........+...++.++.++++||+|||+....+............. ..........
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 320 (366)
T TIGR00886 242 LGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVL-GLVSPLSLAV 320 (366)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHh-cCCCcchHHH
Confidence 3445667777765 68876 5566677778888899999999999999998877666555442222222 1110002222
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHH
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIV 134 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~ 134 (226)
..........+.+.+. +..+.+++|..| ++||++.|+.+..+++|
T Consensus 321 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 321 FIVLFVALFFFSGAGN-GSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHhcccc-chhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 2222233333333333 345567788887 68999999988776654
No 203
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.24 E-value=6.3e-05 Score=65.08 Aligned_cols=143 Identities=10% Similarity=0.064 Sum_probs=88.8
Q ss_pred cHHHHHh-hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHH
Q psy10294 15 YLVEIFQ-TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIF 92 (226)
Q Consensus 15 ~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 92 (226)
..|.+.+ .+|.+. +.+.......++.+++++..+++.||.++|+.+..+... .+....... ..+.+......
T Consensus 227 ~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~-----~~~~~~~~~~~ 300 (393)
T PRK11195 227 LVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMAL-----QHSLLPAYPLL 300 (393)
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHHH-----HhHHHHHHHHH
Confidence 3444444 368777 667777888889999999999999999999877766433 222212222 11222222222
Q ss_pred HHHHHHHhccccchhhHHhhccCCcch-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHh
Q psy10294 93 CICFWISGYGILALPWMLMSEIFPVRI-RGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~e~~p~~~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 165 (226)
...+.+.+... +...+...|..|++. ||++.++.+....++..++..+...+ ...|-+..+.+.+...++.
T Consensus 301 ~~~G~~~g~~~-~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 372 (393)
T PRK11195 301 ILIGALGGFFV-VPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVA 372 (393)
T ss_pred HHHHHhhhhhh-hhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHH
Confidence 22222222222 223345667766654 79999999999999999988887754 5667776665544444443
No 204
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.20 E-value=5e-06 Score=72.01 Aligned_cols=130 Identities=12% Similarity=0.080 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHH
Q psy10294 31 WVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWML 110 (226)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (226)
...+..-+...+.-.+..++.+|+|-|+.++++..+..+=...... .++.+.....-.+...-..... ....-|
T Consensus 263 ~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~-----~~~~~~i~~~klLH~~e~~l~l-va~fkY 336 (412)
T PF01306_consen 263 YLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGF-----ATNPWVISLIKLLHALEFPLLL-VAAFKY 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-------SHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhh-----hcchHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 3455556666778888899999999999999999998882222222 1344444443344333333222 223458
Q ss_pred hhccCCcchhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 111 MSEIFPVRIRGVACGIC-AAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 111 ~~e~~p~~~R~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
+++.+|+|..++...+. +....++..+.+...+.+.|++|.+.++++.+.+.+...
T Consensus 337 I~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~ 393 (412)
T PF01306_consen 337 ITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFT 393 (412)
T ss_dssp HHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHH
Confidence 99999999999999886 566778999999999999999999989998888877665
No 205
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.20 E-value=7.4e-05 Score=65.15 Aligned_cols=136 Identities=9% Similarity=0.042 Sum_probs=85.8
Q ss_pred cccHHHHHhhcCCCc---hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 13 RPYLVEIFQTFGVPL---KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
..|++.+.++.+.+. ..............+|.++++++.||+++|+++.+...++.+..+.... .. +....
T Consensus 252 ~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~-----~~-~~~~~ 325 (410)
T TIGR00885 252 WTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF-----AG-GHVGL 325 (410)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-----cC-ChHHH
Confidence 456677776543222 1222344445667899999999999999999988887777774433333 11 22223
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh------chhhHHHH
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWF------GLHGTLFI 157 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g~~~~~~~ 157 (226)
..+...+.+.+..+ |..+....+..+++.+..+.++.... +|+.+.|++.+.+.|.. +.+..|++
T Consensus 326 ~~l~~~glf~s~~f-p~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~ 396 (410)
T TIGR00885 326 YCLTLCSAFMSLMF-PTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFIL 396 (410)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHHH
Confidence 33333333333333 77778888888877665555555433 89999999999999854 35555554
No 206
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.18 E-value=0.00011 Score=62.22 Aligned_cols=150 Identities=15% Similarity=0.059 Sum_probs=109.8
Q ss_pred cceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHH
Q psy10294 9 FVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWI 87 (226)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (226)
+.++.+.++++.+++|++. .....+++..+...+.+++..++..|+|.++.+..+.++..+....=.. .....
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~------~~~~~ 101 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL------GGLPL 101 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc------ccHHH
Confidence 4566788999999999998 7788899999999999999999999999999988777776552221111 12222
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHHHhh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWF-GLHGTLFIYSFITGIGF 166 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~i~~ 166 (226)
.+....+.+.+.+.+ +......+-|-||.+ -+..+|++...-.+++.+++.+...+.++. +||......+...++..
T Consensus 102 L~~gt~l~G~gIav~-nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl 179 (395)
T COG2807 102 LFLGTLLAGAGIAVI-NVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLAL 179 (395)
T ss_pred HHHHHHHHHhhHHHH-HHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHH
Confidence 222222222222222 234456777888876 588899999999999999988888888777 79999988888888775
No 207
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.15 E-value=1.4e-05 Score=70.98 Aligned_cols=128 Identities=13% Similarity=-0.007 Sum_probs=89.8
Q ss_pred hcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHH--HhhcCC---CchHHHHHHHHHH
Q psy10294 22 TFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAI--CSMNLH---WPGWIPLTIFCIC 95 (226)
Q Consensus 22 ~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~--~~~~~~---~~~~~~~~~~~~~ 95 (226)
..|.+. +.+......+++.+++....+.+.+|++.|+++.++.++..+....... ...+.. ...+.......+.
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~ 361 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIA 361 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHH
Confidence 467777 6677777788899999999999999999999999888887763322110 001100 1111222222233
Q ss_pred HHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10294 96 FWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG 150 (226)
Q Consensus 96 ~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 150 (226)
....+....+. ..+++|..|++.+|+..++.....+++..+++.+.+.+.++.|
T Consensus 362 ~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 362 EVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33334444444 4688899999999999999999999999999999998888877
No 208
>KOG2325|consensus
Probab=98.09 E-value=4.4e-05 Score=67.30 Aligned_cols=114 Identities=17% Similarity=0.035 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCC-hHHHHHHHHHHHH-HHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccch
Q psy10294 29 SEWVLVLTGVLAITGSLVSSLTVNKFGK-RPMSLWSTGICFV-FTIALAICSMNLHWPGWIPLTIFCICFWISGYGILAL 106 (226)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~l~d~~Gr-r~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (226)
-+++.....++..++++++|+...|.++ |+.++.|.+++++ .++-... .. .......+.+...+..+.+.+....
T Consensus 73 fG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l-~~--~~~~~~y~mL~~R~l~Gvg~~n~a~ 149 (488)
T KOG2325|consen 73 FGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLAL-AY--VPNGVKYLMLVARILTGVGVGNFAV 149 (488)
T ss_pred hhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHH-Hh--cccchHHHHHHHHHHcCcCcccHHH
Confidence 4688888999999999999999999996 6677778888777 2222122 11 1121333444444444445444455
Q ss_pred hhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 107 PWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTS 145 (226)
Q Consensus 107 ~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (226)
.-.|+++...++.|.++.+.......++..++|.+....
T Consensus 150 lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 150 LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 567899988888889888888776677777777665544
No 209
>PRK09848 glucuronide transporter; Provisional
Probab=98.07 E-value=7.5e-05 Score=65.62 Aligned_cols=58 Identities=19% Similarity=0.249 Sum_probs=42.8
Q ss_pred ecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc----CChHHH-HHHHHHHHH
Q psy10294 12 MRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF----GKRPMS-LWSTGICFV 69 (226)
Q Consensus 12 ~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~----Grr~~~-~~~~~~~~i 69 (226)
...|++.++++ .|++. ..+....+..+...+..++.|+++||. |||+.. +++.+...+
T Consensus 27 ~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~ 91 (448)
T PRK09848 27 GALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMI 91 (448)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHH
Confidence 34556666665 68887 677888888999999999999999996 777765 444444443
No 210
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.06 E-value=0.0003 Score=64.90 Aligned_cols=157 Identities=15% Similarity=0.076 Sum_probs=95.9
Q ss_pred cceecccHHHHH-hhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcC-CCc
Q psy10294 9 FVSMRPYLVEIF-QTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNK-FGKRPMSLWSTGICFVFTIALAICSMNL-HWP 84 (226)
Q Consensus 9 ~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~-~Grr~~~~~~~~~~~i~~~~~~~~~~~~-~~~ 84 (226)
+|++..-+..++ +.+|.+. .+...........-+.++++|+++|+ +||++.+.++.++..+............ ...
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~ 82 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence 455554444444 4467776 44444445555556778888999995 6999999988888776222222201100 001
Q ss_pred hHH--HHHHHHHHHHHHhccccchhhHHhhccCCcc---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-------chh
Q psy10294 85 GWI--PLTIFCICFWISGYGILALPWMLMSEIFPVR---IRGVACGICAAINSIVCFLVTKTYVTSITWF-------GLH 152 (226)
Q Consensus 85 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~ 152 (226)
... .+..+.+...+.+ +.-+...+...|.++++ .|.....+.+...++|+++++.+.+++.++. +|+
T Consensus 83 ~~~~~~l~gLaLia~G~G-giKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~ 161 (654)
T TIGR00926 83 LHDLLDLLGLALIALGTG-GIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYP 161 (654)
T ss_pred hHHHHHHHHHHHHHhhcc-ccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchH
Confidence 111 2222222222222 23355556778888753 4677888899999999999999999887553 587
Q ss_pred hHHHHHHHHHHHhh
Q psy10294 153 GTLFIYSFITGIGF 166 (226)
Q Consensus 153 ~~~~~~~~~~~i~~ 166 (226)
..|.+.++..+++.
T Consensus 162 ~aF~i~~i~m~ia~ 175 (654)
T TIGR00926 162 LAFGVPAILMILAL 175 (654)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777766665
No 211
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.02 E-value=5.3e-05 Score=66.56 Aligned_cols=164 Identities=14% Similarity=0.154 Sum_probs=103.7
Q ss_pred ceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcc----cCChHHHH-HHHHHHHHHHHHHHHHhhc--
Q psy10294 10 VSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNK----FGKRPMSL-WSTGICFVFTIALAICSMN-- 80 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~----~Grr~~~~-~~~~~~~i~~~~~~~~~~~-- 80 (226)
.....|+..++.| .|++. ..+....+.-+...+..++.|.++|| +|||+..+ ++.+..++.....+. ...
T Consensus 29 ~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~-~p~~~ 107 (467)
T COG2211 29 GIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFI-TPDFS 107 (467)
T ss_pred HHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHc-CCCcc
Confidence 3456778888876 68886 56666667777778999999999995 78766554 454555553333333 111
Q ss_pred CCCchHHHHHHHHHHHHHHhccccchhhHHhhccCC-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------hchh
Q psy10294 81 LHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFP-VRIRGVACGICAAINSIVCFLVTKTYVTSITW-------FGLH 152 (226)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~ 152 (226)
......+......+...++.....|. .++.+|+.+ +++|.+..+.-..+..++..+...+.+.+.+. .||+
T Consensus 108 ~~~k~~ya~vtY~l~~l~YT~vniPy-~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~ 186 (467)
T COG2211 108 MTGKLIYALVTYMLLGLGYTLVNIPY-GALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQ 186 (467)
T ss_pred cCcchHHHHHHHHHHHHHHHheeCch-hhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHH
Confidence 01223333333344444444332222 246677764 58999999999999999988888777766654 3566
Q ss_pred hHHHHHHHHHHHhhhhhhcccccccccceeEEEEecc
Q psy10294 153 GTLFIYSFITGIGFAIRIRGVACGICAAINSIVCFLV 189 (226)
Q Consensus 153 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~e 189 (226)
....+++++..+.. +.+++-.+|
T Consensus 187 ~~~~~~~vi~~i~~--------------l~~~~~v~E 209 (467)
T COG2211 187 GTALVLGVIGVILL--------------LFCFFNVKE 209 (467)
T ss_pred HHHHHHHHHHHHHH--------------HHHHHHhhc
Confidence 66666666666665 566665666
No 212
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.00 E-value=1e-05 Score=53.57 Aligned_cols=62 Identities=15% Similarity=0.298 Sum_probs=53.1
Q ss_pred cccccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHH
Q psy10294 5 FNSSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGI 66 (226)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~ 66 (226)
.+.+...+.+|+|.+.++.|++. +.+....+.-+...++++++|.++||++|++..+.....
T Consensus 12 ~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 34566778899999999999998 778888889999999999999999999999887765544
No 213
>KOG2533|consensus
Probab=97.92 E-value=9.1e-06 Score=72.30 Aligned_cols=145 Identities=8% Similarity=0.033 Sum_probs=82.5
Q ss_pred cccccceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcc----cCChHHHHHHHHHHHHHH-HHHHHH
Q psy10294 5 FNSSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNK----FGKRPMSLWSTGICFVFT-IALAIC 77 (226)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~----~Grr~~~~~~~~~~~i~~-~~~~~~ 77 (226)
.....+.+.+|+|.++++ .|++. ++...++...++.+++.+++|+++|| ..+|........+..+.. .....
T Consensus 285 ~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~- 363 (495)
T KOG2533|consen 285 LKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLA- 363 (495)
T ss_pred HhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 344567788999999988 56877 77888899999999999999999999 566666655555554422 22222
Q ss_pred hhcCCCchHHHHHHHHHHHHHHhcc-ccchhhHHhhccCCcchhh-hHHHHHHHHHHHHHHHHHHHHHH-HHHhhchhhH
Q psy10294 78 SMNLHWPGWIPLTIFCICFWISGYG-ILALPWMLMSEIFPVRIRG-VACGICAAINSIVCFLVTKTYVT-SITWFGLHGT 154 (226)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~R~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~ 154 (226)
......... ..+.+.++.. ..+......++......|. +..+........++.+++.+... ...+++|...
T Consensus 364 ----~~~~~~~~~--~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~ 437 (495)
T KOG2533|consen 364 ----AAVLPGAYG--AFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAV 437 (495)
T ss_pred ----hccchHHhH--HHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhH
Confidence 111111111 1111111111 1233444555555554444 44444444555556665555443 3344566555
Q ss_pred HH
Q psy10294 155 LF 156 (226)
Q Consensus 155 ~~ 156 (226)
+.
T Consensus 438 f~ 439 (495)
T KOG2533|consen 438 FY 439 (495)
T ss_pred HH
Confidence 53
No 214
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.91 E-value=0.0013 Score=52.88 Aligned_cols=145 Identities=20% Similarity=0.241 Sum_probs=84.9
Q ss_pred ccHHHHHhhcCCCc---hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy10294 14 PYLVEIFQTFGVPL---KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLT 90 (226)
Q Consensus 14 ~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (226)
...+.+..+.+.+. ...+......+...++.+..|.+.||+|||+.+..+........+.... . .......+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~ 98 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL--A--PNVGLALLL 98 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHh--C--ccchHHHHH
Confidence 34555566655443 2456677777778888899999999999998777776652222122222 0 111222222
Q ss_pred HHHHHHHHHhccccchhhHHhhccCCc-chhhhHHHHHHH-HHHHHHHHHHHHHHHHHHh--hchhhHHHHHHHHH
Q psy10294 91 IFCICFWISGYGILALPWMLMSEIFPV-RIRGVACGICAA-INSIVCFLVTKTYVTSITW--FGLHGTLFIYSFIT 162 (226)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~R~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~ 162 (226)
......+.......+....+..|..|. +.|+...+.... ...++..+++.+...+... .+|+..+.......
T Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 99 ILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 222222222223445667789999998 678888888777 4556666666555544433 56776444444333
No 215
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.91 E-value=0.00023 Score=61.28 Aligned_cols=131 Identities=13% Similarity=0.072 Sum_probs=72.7
Q ss_pred ccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHH
Q psy10294 14 PYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTI 91 (226)
Q Consensus 14 ~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (226)
.+.|.+.++ +|.+. +..+......++..+++++.+++.||++|+................... .......+.....
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 305 (394)
T PRK11652 228 ACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPG--WFGVMNVWTLLVP 305 (394)
T ss_pred HhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhccccHHHHHHH
Confidence 344556655 67776 4555556666777778888888888887433222121111111111111 0001122222222
Q ss_pred HHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10294 92 FCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW 148 (226)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (226)
......+.+. ..+....+..|.+| +.++++.++.+....++..+++.+.+.+...
T Consensus 306 ~~~~~~g~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 306 AALFFFGAGM-LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHH-HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 2222222222 23555566778887 5789999999988889999998887765443
No 216
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.90 E-value=9.1e-06 Score=70.43 Aligned_cols=150 Identities=15% Similarity=0.078 Sum_probs=81.5
Q ss_pred cceecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHH-HhhcCCCch
Q psy10294 9 FVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAI-CSMNLHWPG 85 (226)
Q Consensus 9 ~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 85 (226)
.....++.|..+++ .|++. +.+...+...+..++.+++.|.++||+|.||-+++...+..+...+... .+...-+.+
T Consensus 23 ~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n 102 (412)
T PF01306_consen 23 WGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSN 102 (412)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455677777875 79998 7788888888999999999999999999777666554444331111111 000000011
Q ss_pred HHHHHHHHHHHHHHhccccc---hhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q psy10294 86 WIPLTIFCICFWISGYGILA---LPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFIT 162 (226)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 162 (226)
..... .......+..+.+ +.-+++.+. .+..+.-.|=..+.+++|-.+++.+.+.+.+. +.+..+|+.....
T Consensus 103 ~~lg~--iig~i~l~~~f~~~~~~~Ea~~er~--sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~ 177 (412)
T PF01306_consen 103 FWLGA--IIGGIYLGLVFNAGVPLSEAYAERV--SRRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAA 177 (412)
T ss_dssp -HHHH--HHTTTTTTTTTTTHHHHHHHHHHHH--HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred HHHHH--HHHHHHHHHHHcccchHHHHHHHHH--HHHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHH
Confidence 11111 1111112222322 222233211 23345556777788888888999998888764 4455666554443
Q ss_pred H
Q psy10294 163 G 163 (226)
Q Consensus 163 ~ 163 (226)
.
T Consensus 178 ~ 178 (412)
T PF01306_consen 178 I 178 (412)
T ss_dssp H
T ss_pred H
Confidence 3
No 217
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.87 E-value=4.8e-05 Score=66.16 Aligned_cols=65 Identities=12% Similarity=0.196 Sum_probs=51.3
Q ss_pred cccccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCC-hHHHHHHHHHHHH
Q psy10294 5 FNSSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGK-RPMSLWSTGICFV 69 (226)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Gr-r~~~~~~~~~~~i 69 (226)
++.......+|+|.++++.|++. +.+...+...+..+++++++|+++||.++ |+.+.+..++..+
T Consensus 14 ~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~ 80 (400)
T PF03825_consen 14 YFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSAL 80 (400)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHH
Confidence 34445566788999999999987 77888899999999999999999999875 5555555555554
No 218
>KOG3762|consensus
Probab=97.82 E-value=3.1e-05 Score=68.51 Aligned_cols=130 Identities=17% Similarity=0.065 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH-HHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhh
Q psy10294 30 EWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV-FTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPW 108 (226)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (226)
+........+.++.-+..+++.+|+|+-+++..++.+..+ ++..... .++|..+-+-.+-+...+..+ ...-
T Consensus 409 Gv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L------~n~W~vLPieilqgit~aliW-aa~~ 481 (618)
T KOG3762|consen 409 GVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL------QNPWMVLPIEILQGITHALIW-AAII 481 (618)
T ss_pred eehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh------cCchheeeHHHHHHHHHHHHH-HHHH
Confidence 3455666677788889999999999999999999888888 5443333 445555544444444444433 3344
Q ss_pred HHhhccCCcchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 109 MLMSEIFPVRIRGVACGICAAI-NSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 109 ~~~~e~~p~~~R~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.|++...|++.|+++.++.... -.+|-.+++.+++.+.+.++-+..|.++++.+++..
T Consensus 482 sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l 540 (618)
T KOG3762|consen 482 SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTL 540 (618)
T ss_pred HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHH
Confidence 6999999999999999987654 457888899999999999999999998888877765
No 219
>KOG2563|consensus
Probab=97.77 E-value=0.00015 Score=62.88 Aligned_cols=120 Identities=18% Similarity=0.108 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhc-CCCchHHHHHHHHHHHH-HHhccccc
Q psy10294 28 KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMN-LHWPGWIPLTIFCICFW-ISGYGILA 105 (226)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 105 (226)
.+.|.+.++.+.+++..+.+.|+.||+|-|...+++.....+....-..+... -+...+..+....-... ........
T Consensus 80 ~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~ 159 (480)
T KOG2563|consen 80 AADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILG 159 (480)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhc
Confidence 56788999999999999999999999999999999999988833322221111 00111211111111111 11111112
Q ss_pred hhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 106 LPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT 147 (226)
Q Consensus 106 ~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (226)
.+.-+..-+||+++|++++.+..+.+.+|..++..+-+.+..
T Consensus 160 lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 160 LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 223355568999999999999999988888888776665543
No 220
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.76 E-value=0.001 Score=59.18 Aligned_cols=141 Identities=13% Similarity=0.046 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH-HHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhH
Q psy10294 31 WVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV-FTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWM 109 (226)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (226)
....+..+...+..++.|.++|+-|+||.++.......+ ......+ . +....+....+..+...+++.+ ...-..
T Consensus 74 ~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~-v--~~~~~~~~~~l~iia~v~~~~~-~vfyna 149 (477)
T PF11700_consen 74 YANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWF-V--SPGQWWLALVLFIIANVGYEAS-NVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH-h--CcchHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 345566777788889999999999987777655544444 4444444 1 1222233333333333333322 233456
Q ss_pred HhhccCCcchh--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHh--------hchhhHH
Q psy10294 110 LMSEIFPVRIR--------------------------GVACGICAAINSIVCFLVTKTYVTSITW--------FGLHGTL 155 (226)
Q Consensus 110 ~~~e~~p~~~R--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~g~~~~~ 155 (226)
+..|+.+++.+ ++..+.....+++|+.+.-.+.-.+... ...|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 88899988888 8999999889999888776654443321 2246666
Q ss_pred HHHHHHHHHhhhhhhcccccccccceeEEEEecc
Q psy10294 156 FIYSFITGIGFAIRIRGVACGICAAINSIVCFLV 189 (226)
Q Consensus 156 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~e 189 (226)
.+.++.-++.. +..++++||
T Consensus 230 ~~~a~ww~vfs--------------iP~~~~~~~ 249 (477)
T PF11700_consen 230 LIVALWWLVFS--------------IPLFLWLPD 249 (477)
T ss_pred HHHHHHHHHHH--------------HHHHHhCCC
Confidence 66666655555 555566777
No 221
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.52 E-value=0.00053 Score=61.24 Aligned_cols=115 Identities=11% Similarity=0.084 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCChH-------HHHHHHHHHHHHHHHHH---HHhhc-C-CCchHHHHHHHHHHH
Q psy10294 29 SEWVLVLTGVLAITGSLVSSLTVNKFGKRP-------MSLWSTGICFVFTIALA---ICSMN-L-HWPGWIPLTIFCICF 96 (226)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~-------~~~~~~~~~~i~~~~~~---~~~~~-~-~~~~~~~~~~~~~~~ 96 (226)
+.+......+..++.+++.+.+.||++||+ -+.++.++..+..+... ..... + ..+.++......+.+
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 445555666667778888899999999986 35566666555221110 10111 1 122233333333332
Q ss_pred HHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 97 WISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVT 144 (226)
Q Consensus 97 ~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 144 (226)
.+ .....+....++.+..|++.++.++|+......+|+.++..+...
T Consensus 391 ~G-e~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~ 437 (489)
T PRK10207 391 LG-ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATF 437 (489)
T ss_pred HH-HHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 222345556678888999999999999998888888888776643
No 222
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.51 E-value=0.0011 Score=60.24 Aligned_cols=132 Identities=17% Similarity=0.178 Sum_probs=75.7
Q ss_pred ceecccHHHHHhh-cCCCc----hHHHHHHHHHHHHHHHHHHHHHHhcccCC-hHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10294 10 VSMRPYLVEIFQT-FGVPL----KSEWVLVLTGVLAITGSLVSSLTVNKFGK-RPMSLWSTGICFVFTIALAICSMNLHW 83 (226)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~----~~~~~~~~~~~~~~~~~~~~~~l~d~~Gr-r~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (226)
+++..+.|+.... ++-+. +..+......++...|+++.+.+..+++| |..++++.+.+.++.-++.....+ +
T Consensus 327 ~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~--n 404 (599)
T PF06609_consen 327 FSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPD--N 404 (599)
T ss_pred HHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCC--C
Confidence 3444455555443 33332 23566677888888899999999988887 555556655555432222221111 1
Q ss_pred chHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 84 PGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTS 145 (226)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (226)
.+ .......+.+.+.+.. .....+.++-..|++.-+++.++...+..+|+.++..++..+
T Consensus 405 ~~-~~i~~~~l~g~giG~~-~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 405 KN-AAIAFLVLAGFGIGGI-LVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred cc-hHHHHHHHHHHhHHHH-HHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 22 1222222222222221 122334555568999999999999999888888877665443
No 223
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.46 E-value=0.0079 Score=51.94 Aligned_cols=111 Identities=13% Similarity=0.181 Sum_probs=69.5
Q ss_pred HHHHHHHHHHhcccC-----ChHHHHHHHHHHHH---HHHHHHHHhhcC-----CCchHHHHHHHHHHHHHHhcccc---
Q psy10294 41 ITGSLVSSLTVNKFG-----KRPMSLWSTGICFV---FTIALAICSMNL-----HWPGWIPLTIFCICFWISGYGIL--- 104 (226)
Q Consensus 41 ~~~~~~~~~l~d~~G-----rr~~~~~~~~~~~i---~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--- 104 (226)
.+..+..|+.+|+.+ ||..+++....... ...+........ ..+.+.-.......+..++.+..
T Consensus 28 ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~ 107 (403)
T PF03209_consen 28 APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASG 107 (403)
T ss_pred HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhH
Confidence 346789999999999 99888775444433 111111111111 11223322222222333333332
Q ss_pred chhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q psy10294 105 ALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGL 151 (226)
Q Consensus 105 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 151 (226)
..-.++.+|..|+++|+++.++......+|..++..+.+.+.+.+..
T Consensus 108 T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~ 154 (403)
T PF03209_consen 108 TSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP 154 (403)
T ss_pred HHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 22346889999999999999999998889999999888887776553
No 224
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.45 E-value=0.0025 Score=54.80 Aligned_cols=142 Identities=12% Similarity=0.155 Sum_probs=96.1
Q ss_pred ecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 12 MRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 12 ~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
+..+++.+..+ .|.+. +.....+....+.++|-+++.++..|+...+.+....++..+.++.... .++...+
T Consensus 255 ~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l------~~g~v~~ 328 (422)
T COG0738 255 IGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVAL------IGGVVAL 328 (422)
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH------hcChHHH
Confidence 45677888877 67776 5667788888899999999999999999888887777666663333333 1223333
Q ss_pred HHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFIT 162 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 162 (226)
.....++.+.+ ...|..+....+..|. + ....|..-....+|+.+.|++.+++.|..|-...+.....++
T Consensus 329 ~~l~~ig~F~s-imfPTIfslal~~l~~-~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc 398 (422)
T COG0738 329 YALFLIGLFNS-IMFPTIFSLALKNLGE-H-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLC 398 (422)
T ss_pred HHHHHHHHHhH-HHHHHHHHHHHhccCc-c-ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 33333333333 3457777888888883 3 333344444567889999999999999988766555333333
No 225
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.45 E-value=0.0076 Score=45.43 Aligned_cols=107 Identities=10% Similarity=-0.007 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhH
Q psy10294 30 EWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWM 109 (226)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (226)
.....+......+.+++...+.+++|.|+.++++.+...+....... ...+..+..-.+.+.+.+. .....-.
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~------~~~~~l~~~s~l~G~~~a~-lW~aqg~ 112 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY------PNSYTLYPASALLGFGAAL-LWTAQGT 112 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHhhhhHH-hhHhhhH
Confidence 34556667777888889999999999999999999888875544433 1223333322233333332 2233345
Q ss_pred HhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy10294 110 LMSEIFPVRIRGVACGICAAINSIVCFLVTKTYV 143 (226)
Q Consensus 110 ~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 143 (226)
++.+..+++.|++-.++.......+.+++..+.-
T Consensus 113 ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 113 YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 7888889999999988877777666666655433
No 226
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.36 E-value=0.0024 Score=56.18 Aligned_cols=147 Identities=13% Similarity=0.128 Sum_probs=84.5
Q ss_pred HHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccc-----CChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHH
Q psy10294 16 LVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKF-----GKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPL 89 (226)
Q Consensus 16 ~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~-----Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (226)
.|.+.+++|++. +.+.......+ --...++.|.++|-+ .||+-++++.+++.+....... ......+.....
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~l-Pw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~-~~~~~~s~~~~~ 90 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASL-PWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLAL-LPASESSAAIAV 90 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhC-chHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHh-cccccchhhhHH
Confidence 445556788885 33322222222 234578899999976 3555555666666543332222 111111111211
Q ss_pred HHHHHHHHHHhccccchhhHHhhccC---CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 90 TIFCICFWISGYGILALPWMLMSEIF---PVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~e~~---p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
..+.....+... .....-..+.|.. |.+ |+...+.......+|+.++..+.+.+.+..+.+..|.+.+.+..+..
T Consensus 91 ~~l~la~~g~a~-~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 91 VLLFLASFGYAF-ADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHH-HHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 222221122111 2233334555653 445 88888888888899999999999999998898888888877776665
No 227
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.33 E-value=0.0017 Score=58.18 Aligned_cols=115 Identities=12% Similarity=0.013 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH----HHhcccCChHHHHHHHHHHHHHHHHHHHH-hhcC--CCchHHHHHHHHHHHHHHhc
Q psy10294 29 SEWVLVLTGVLAITGSLVSS----LTVNKFGKRPMSLWSTGICFVFTIALAIC-SMNL--HWPGWIPLTIFCICFWISGY 101 (226)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~----~l~d~~Grr~~~~~~~~~~~i~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~ 101 (226)
..+...+..+..++..++.+ ++.||++.++.+.++.++.++........ ...+ ...+.........+.+....
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 45566666666666655554 44455555566677777776632222221 1100 11112223333333344444
Q ss_pred cccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy10294 102 GILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYV 143 (226)
Q Consensus 102 ~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 143 (226)
...|....++.+..|++.||+.+|.......+++.++..+..
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777788999999999999999887766666666655543
No 228
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.33 E-value=0.004 Score=55.44 Aligned_cols=135 Identities=14% Similarity=0.020 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCC-hHHHHHHHHHHHHHHHHHHHHhh-cCC-------------Cc--hHHHHHHHH
Q psy10294 31 WVLVLTGVLAITGSLVSSLTVNKFGK-RPMSLWSTGICFVFTIALAICSM-NLH-------------WP--GWIPLTIFC 93 (226)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~l~d~~Gr-r~~~~~~~~~~~i~~~~~~~~~~-~~~-------------~~--~~~~~~~~~ 93 (226)
+...+..+...+.+++--++.+|+|+ |+....+.++.+++.....+... .++ .. .+..+..+.
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 44556666666777778888999995 67778887777764333332111 000 00 133333333
Q ss_pred HHHHHHhccccchhhHHhhccCCc--chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch--hhHHHHHHHHHHHhh
Q psy10294 94 ICFWISGYGILALPWMLMSEIFPV--RIRGVACGICAAINSIVCFLVTKTYVTSITWFGL--HGTLFIYSFITGIGF 166 (226)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~e~~p~--~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~i~~ 166 (226)
..+... .....+++++++|..|+ +..|..+|+.+.+..+.+.+.+...+.+.+.+|- ...+.+-++..+++.
T Consensus 389 ~~Gi~~-A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa 464 (477)
T TIGR01301 389 ILGIPL-AITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSG 464 (477)
T ss_pred HhhHHH-HHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHH
Confidence 333332 33457899999999995 4458999999999999999988877776666652 233444444455554
No 229
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.30 E-value=0.012 Score=52.49 Aligned_cols=138 Identities=14% Similarity=0.044 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----Hhcc-cCChHHH--HHHHHHHHHHHHHHHH-HhhcC--CCchHHHHHHHHHHHHH
Q psy10294 29 SEWVLVLTGVLAITGSLVSSL----TVNK-FGKRPMS--LWSTGICFVFTIALAI-CSMNL--HWPGWIPLTIFCICFWI 98 (226)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~----l~d~-~Grr~~~--~~~~~~~~i~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~ 98 (226)
..+..++..+.-++..++..+ +.|| .+.+... .+|.++..+....... ....+ ...+...++....+...
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 456666666666666665444 3443 2223333 4555555542211111 01111 11222223333333333
Q ss_pred HhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 99 SGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 99 ~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
......|....+++|..|++.||+.+|+......+|..+++.+.....+..+|.+.+...+....+..
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVG 461 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHH
Confidence 34445677788999999999999999999999999999988887766665567666666555555443
No 230
>KOG2563|consensus
Probab=97.21 E-value=0.0004 Score=60.37 Aligned_cols=142 Identities=17% Similarity=0.136 Sum_probs=87.5
Q ss_pred cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCC-hHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHh
Q psy10294 23 FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGK-RPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISG 100 (226)
Q Consensus 23 ~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Gr-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (226)
.|++. .+++......+..++++.++|.+.||.++ |...++......+..+....+.. .....+.+...+...+.++
T Consensus 296 sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~--~~~~~viv~~t~~~~g~~~ 373 (480)
T KOG2563|consen 296 SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTL--FLGDSVIVFTTCGLLGFFG 373 (480)
T ss_pred ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCceEehhhhHHHHHHhh
Confidence 46665 56777778888889999999999999876 44444444444443322222111 2222233333444445556
Q ss_pred ccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc----hhhHHHHHHHHHHHhh
Q psy10294 101 YGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG----LHGTLFIYSFITGIGF 166 (226)
Q Consensus 101 ~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~i~~ 166 (226)
.+..|+-.-+..|..-|..-++..|+....+.+-+++-....+...+..+ +...-+.......+..
T Consensus 374 ~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~ 443 (480)
T KOG2563|consen 374 TGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGA 443 (480)
T ss_pred cCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHH
Confidence 66677766667776544445677888888888888888888777777666 4333344444444443
No 231
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.17 E-value=0.0025 Score=42.77 Aligned_cols=66 Identities=18% Similarity=0.198 Sum_probs=56.3
Q ss_pred eecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHH
Q psy10294 11 SMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAI 76 (226)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~ 76 (226)
...+.+|.+.++.+++. +..+..+.+.+++.+|++....+.++..+++.+..+.+.+.+....+..
T Consensus 10 ayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999998 7889999999999999999999999988888888888888775555444
No 232
>PTZ00207 hypothetical protein; Provisional
Probab=97.03 E-value=0.014 Score=53.32 Aligned_cols=149 Identities=17% Similarity=0.172 Sum_probs=86.1
Q ss_pred eecccHHHHHhhc-CCCchH--H-HHHHHHHHHHHHHHHHHHHHhcccCCh--------HHHHHHHHHHHHHHHHHHHHh
Q psy10294 11 SMRPYLVEIFQTF-GVPLKS--E-WVLVLTGVLAITGSLVSSLTVNKFGKR--------PMSLWSTGICFVFTIALAICS 78 (226)
Q Consensus 11 ~~~~~~~~~~~~~-g~~~~~--~-~~~~~~~~~~~~~~~~~~~l~d~~Grr--------~~~~~~~~~~~i~~~~~~~~~ 78 (226)
.+..-+.++.+.+ |.+.+. . ...++.++++.+|-+.+|+++...-|| +..+....++.+..+.++.
T Consensus 371 ~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~-- 448 (591)
T PTZ00207 371 VIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFL-- 448 (591)
T ss_pred eeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHH--
Confidence 3344466777877 763322 2 257788888888888888776222222 2222222222222222222
Q ss_pred hcCCCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHH-HHHHHHHHHhh--------
Q psy10294 79 MNLHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLV-TKTYVTSITWF-------- 149 (226)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------- 149 (226)
..+.....+...+.+.++|..+ ++....++|+|. ++=|+-..+......+|+.+. -.+.+.+.|..
T Consensus 449 ---~~p~~~L~~~~~lvg~~~G~~~-~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~ 523 (591)
T PTZ00207 449 ---TLPKAALPLPYFIAAFANGFMA-ATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDV 523 (591)
T ss_pred ---HCCccHhHHHHHHHHHHhhHhH-HHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCe
Confidence 1221223333334444444433 455568999999 888888888877777777765 45666665542
Q ss_pred -----chhhHHHHHHHHHHHhh
Q psy10294 150 -----GLHGTLFIYSFITGIGF 166 (226)
Q Consensus 150 -----g~~~~~~~~~~~~~i~~ 166 (226)
..+.+|++.+.++.++.
T Consensus 524 C~G~~C~~~~~~v~~~~~~~g~ 545 (591)
T PTZ00207 524 CTERVCVVMPLAFLLGLSFLAF 545 (591)
T ss_pred eCCceeeHhHHHHHHHHHHHHH
Confidence 25678888888888776
No 233
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.00 E-value=0.014 Score=50.94 Aligned_cols=151 Identities=9% Similarity=-0.043 Sum_probs=73.1
Q ss_pred eecccHHHHHhh-cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH-HHHHHHHHhhcCCCchHH
Q psy10294 11 SMRPYLVEIFQT-FGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV-FTIALAICSMNLHWPGWI 87 (226)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~ 87 (226)
....+.|.+.++ .|.+. +..+.......+..+++.+.+.+.++..+++.......+..+ ..+........ .+..+.
T Consensus 236 ~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~-~~~~~~ 314 (413)
T PRK15403 236 SWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLW-PHVWLW 314 (413)
T ss_pred HHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHc-cccHHH
Confidence 344557878776 47876 455655566667777777777665444443332222211111 11111100000 111111
Q ss_pred HHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHh
Q psy10294 88 PLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 165 (226)
..........+.+... +...... ..-....+|++.++.+.....+...++...+++.++ +-+..+.....+..+.
T Consensus 315 ~~~~~~l~~~G~~~~~-p~~~~~a-l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 315 SVLGTSLYAFGIGLIF-PTLFRFT-LFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHHHHHHHHHHHHh-HHHHHHH-hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHH
Confidence 1222222222222221 2222111 111222478888888888888888888887776665 4455565555444433
No 234
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.93 E-value=0.022 Score=49.50 Aligned_cols=153 Identities=12% Similarity=-0.058 Sum_probs=85.7
Q ss_pred eecccHHHHHhh-c---CCCc-hH--H--HHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH-HHHHHHHHhhc
Q psy10294 11 SMRPYLVEIFQT-F---GVPL-KS--E--WVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV-FTIALAICSMN 80 (226)
Q Consensus 11 ~~~~~~~~~~~~-~---g~~~-~~--~--~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i-~~~~~~~~~~~ 80 (226)
...++.|.++++ . |.+. +. . ...++..+...+-+++-|.++|+.|+||..+-......+ +...+.. ..+
T Consensus 33 vtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~-i~~ 111 (438)
T COG2270 33 VTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWF-IPP 111 (438)
T ss_pred eeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHH-hCC
Confidence 445666666654 2 3343 22 2 234556666677788889999999987776655555444 4444444 111
Q ss_pred CCCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH--------------
Q psy10294 81 LHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI-------------- 146 (226)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 146 (226)
. ..+.....+.........+.+..-..+..++.+++.-++..+.....+.+|+.+.-.......
T Consensus 112 -~-s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~ 189 (438)
T COG2270 112 -G-SYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLG 189 (438)
T ss_pred -C-chHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeec
Confidence 1 233333333332222222222334467888888888888888877777777765443321111
Q ss_pred ----HhhchhhHHHHHHHHHHHhh
Q psy10294 147 ----TWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 147 ----~~~g~~~~~~~~~~~~~i~~ 166 (226)
+...-|.++.+.++..++..
T Consensus 190 l~~~~~~~~ri~~~l~A~W~li~~ 213 (438)
T COG2270 190 LPPADGEDVRITGLLAALWWLLFA 213 (438)
T ss_pred cCccccccchhHHHHHHHHHHHHH
Confidence 22345666777777766665
No 235
>KOG1330|consensus
Probab=96.51 E-value=0.032 Score=49.04 Aligned_cols=140 Identities=13% Similarity=0.030 Sum_probs=72.0
Q ss_pred ecccHHHHHhh----cCCCch-HHHHHHHHHHHHHHHHHHHHHHhcccC-------ChHHHHHHHHHHHHHHHHHHHHhh
Q psy10294 12 MRPYLVEIFQT----FGVPLK-SEWVLVLTGVLAITGSLVSSLTVNKFG-------KRPMSLWSTGICFVFTIALAICSM 79 (226)
Q Consensus 12 ~~~~~~~~~~~----~g~~~~-~~~~~~~~~~~~~~~~~~~~~l~d~~G-------rr~~~~~~~~~~~i~~~~~~~~~~ 79 (226)
+..+.|.+... .|.+.+ ..+...+...+..+|.+++|.++||+- |.+.-.......+...+....+..
T Consensus 263 ~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~ 342 (493)
T KOG1330|consen 263 LSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFP 342 (493)
T ss_pred cchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHH
Confidence 34455544432 344443 345566777788999999999999842 222222222222221111111111
Q ss_pred cCCCc-hHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhh-chh
Q psy10294 80 NLHWP-GWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIV-CFLVTKTYVTSITWF-GLH 152 (226)
Q Consensus 80 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-g~~ 152 (226)
..... .+..++++.+........+.+... +..|+.|++.|.++.++.....-+. .+-+|++.+.+.++. ||+
T Consensus 343 ~~~~~s~~~~~il~~~g~~~~~~~~a~n~~-i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 343 AFTSSSMIFGLILFLVGETISWFNWATNNP-IFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhcccccccc-eeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 11122 222222222222222333333343 4458899999999999988776654 444555777766653 443
No 236
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.28 E-value=0.014 Score=48.95 Aligned_cols=62 Identities=10% Similarity=-0.028 Sum_probs=50.0
Q ss_pred cchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH----------------hhchhhHHHHHHHHHHHh
Q psy10294 104 LALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT----------------WFGLHGTLFIYSFITGIG 165 (226)
Q Consensus 104 ~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~i~ 165 (226)
.+....+++++.|++++++..++.+.++.+|.+++|.+...+.. ...|+.+++..+.+..+.
T Consensus 28 q~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~ 105 (310)
T TIGR01272 28 QVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVL 105 (310)
T ss_pred HhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 35566789999999999999999999999999999999987763 146788888666654444
No 237
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.27 E-value=0.24 Score=42.99 Aligned_cols=123 Identities=14% Similarity=0.096 Sum_probs=80.1
Q ss_pred cCCCc-hHHHHHHHHHHHHHHHHHHHHHHhc-ccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHh
Q psy10294 23 FGVPL-KSEWVLVLTGVLAITGSLVSSLTVN-KFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISG 100 (226)
Q Consensus 23 ~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d-~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (226)
+|++. +.+..+.....+..+|-...+++.. |.++|+...+++..+.+....+..... ..+.+........++.+.+
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~--~~~~~~~~~~~~l~G~g~G 316 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP--LGSPWLFRPGVFLLGLGNG 316 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh--cccchHHHHHHHHHHHhhh
Confidence 57887 6677888888888999888887666 678888888888888773222222111 1223333333333333333
Q ss_pred ccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10294 101 YGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW 148 (226)
Q Consensus 101 ~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (226)
....... ..+-|+.+++..|..+|.+.....++..++....+.+.|.
T Consensus 317 ~f~vgal-s~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 317 LFTVGAL-SLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHH-HHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222222 3455888889999999999988888888888877776653
No 238
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=95.97 E-value=0.4 Score=43.07 Aligned_cols=122 Identities=11% Similarity=0.086 Sum_probs=70.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHhcccCC--hH-----HHHHHHHHHHH-H-HHHHHHHhhcC-CCchHHHHHHHH
Q psy10294 24 GVPLKSEWVLVLTGVLAITGSLVSSLTVNKFGK--RP-----MSLWSTGICFV-F-TIALAICSMNL-HWPGWIPLTIFC 93 (226)
Q Consensus 24 g~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~Gr--r~-----~~~~~~~~~~i-~-~~~~~~~~~~~-~~~~~~~~~~~~ 93 (226)
|++..+.|..+++.+.-++.+++.+++=.|.+| |. =+-++.++..+ + .+......... ...+...++...
T Consensus 305 g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~ 384 (493)
T PRK15462 305 GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGL 384 (493)
T ss_pred ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHH
Confidence 333346777788888777777777766556532 21 13445555555 2 22222211111 112222233333
Q ss_pred HHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHH-HHHHHHHHHHHHHH
Q psy10294 94 ICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAIN-SIVCFLVTKTYVTS 145 (226)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~-~~~~~~~~~~~~~~ 145 (226)
.+.........|+....++++.|++.||+.+|...... .++..++..+....
T Consensus 385 ~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 385 AVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33344455667888889999999999999999986643 56666665554443
No 239
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.87 E-value=0.59 Score=41.71 Aligned_cols=114 Identities=12% Similarity=0.054 Sum_probs=70.5
Q ss_pred HHHHHHHHHH-HHHHHHHHHHhcccCChHHHHHHHHHHHH--HHHHHHHHhhcCCC------------------------
Q psy10294 31 WVLVLTGVLA-ITGSLVSSLTVNKFGKRPMSLWSTGICFV--FTIALAICSMNLHW------------------------ 83 (226)
Q Consensus 31 ~~~~~~~~~~-~~~~~~~~~l~d~~Grr~~~~~~~~~~~i--~~~~~~~~~~~~~~------------------------ 83 (226)
+.-+...+.. ++..++.+++++|++|++.+-+....... ..+.... +.+.+.
T Consensus 47 fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl-~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~ 125 (472)
T TIGR00769 47 FLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVI-YPLSDLLHPTALADKLLSLLPPGFMGFIAI 125 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHH-hcchhhcCCcHHHHHHHhhcchhhHHHHHH
Confidence 3333333333 33478889999999999988776555555 2222222 211111
Q ss_pred -chHHHHHHHHHHHHHHhccccc-hhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 84 -PGWIPLTIFCICFWISGYGILA-LPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSI 146 (226)
Q Consensus 84 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (226)
..|.. ..+....-..+.-..+ +-|.+++|++++++-.+-.++...+++++..+++.+..++.
T Consensus 126 ~~~W~~-~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 126 LRIWSF-ALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111 1111111222222223 67899999999999999999999999999999998877765
No 240
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.65 E-value=0.65 Score=40.97 Aligned_cols=127 Identities=17% Similarity=0.162 Sum_probs=80.0
Q ss_pred cHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHH
Q psy10294 15 YLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWP-GWIPLTIF 92 (226)
Q Consensus 15 ~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~ 92 (226)
....+..+.|++. ..+..-....+..+.|.++..++.+|+|-.+.=+++......+.............+ .......+
T Consensus 280 lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l 359 (432)
T PF06963_consen 280 LMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLL 359 (432)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHH
Confidence 3455666668876 455666677777888999999999999999888888887777333222212222222 12222222
Q ss_pred HHHHHHHhcc---ccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHH
Q psy10294 93 CICFWISGYG---ILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKT 141 (226)
Q Consensus 93 ~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~ 141 (226)
.......=.| +.....-++.|..|+++||+..|.-...+++...+...+
T Consensus 360 ~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 360 LGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222 233344578899999999999999888887766655433
No 241
>KOG3762|consensus
Probab=95.53 E-value=0.022 Score=50.94 Aligned_cols=65 Identities=17% Similarity=0.212 Sum_probs=53.3
Q ss_pred cccccceecccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q psy10294 5 FNSSFVSMRPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV 69 (226)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i 69 (226)
...+..++.+.++.+.+++|++. +.......-=+..+++.+++|+++||+-+|+.++++..+..+
T Consensus 23 ~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v 88 (618)
T KOG3762|consen 23 FGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSV 88 (618)
T ss_pred eeecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 45566788899999999999987 666666677778899999999999999988777777666655
No 242
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.49 E-value=0.49 Score=41.36 Aligned_cols=128 Identities=6% Similarity=-0.062 Sum_probs=74.1
Q ss_pred cccHHHHHhh--cCCCc-hHHHHHHHH-HHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q psy10294 13 RPYLVEIFQT--FGVPL-KSEWVLVLT-GVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIP 88 (226)
Q Consensus 13 ~~~~~~~~~~--~g~~~-~~~~~~~~~-~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (226)
-+|+..++.+ .|++. +...-.... .-..+..-+....+.|..|-|++++.+.+...+.-..+.. ...-...
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~-----~~sv~~m 97 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLF-----GTSVLAM 97 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-----HCcHHHH
Confidence 3454455543 57765 332222222 2233556667788999999999999888877663333333 1233333
Q ss_pred HHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 89 LTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT 147 (226)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (226)
-..-...+.... ....-+.|+--..|+++=-++.+.......+|.+++..++..+..
T Consensus 98 q~~q~~yg~~~a--~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 98 QLMQFFYGLATA--AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHHHH--HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333332222 223334455555677777778888888877888888877776655
No 243
>KOG3764|consensus
Probab=95.48 E-value=0.026 Score=48.83 Aligned_cols=140 Identities=12% Similarity=0.077 Sum_probs=81.1
Q ss_pred hhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccC--ChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHH
Q psy10294 21 QTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFG--KRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFW 97 (226)
Q Consensus 21 ~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~G--rr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (226)
+++..+. +.........+...++..+.+.+.||++ |-.....+.....++......+. .-..-+......+..+.
T Consensus 299 e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~--~~~~L~vp~~~l~~~i~ 376 (464)
T KOG3764|consen 299 ETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFAT--SIAQLWVPNFGLGFGIG 376 (464)
T ss_pred HhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhh--hHHHHhhhhHHHHHHHH
Confidence 3455444 3445555677788999999999999999 43333333333333332222210 00011222222222222
Q ss_pred HHhccccchhhHHhhccCCcc------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 98 ISGYGILALPWMLMSEIFPVR------IRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 98 ~~~~~~~~~~~~~~~e~~p~~------~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.......|. ..++...+ .=|...++......++..++|.+.+.+.+.+|++|...+.++..++-.
T Consensus 377 ~~dasl~P~----l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iya 447 (464)
T KOG3764|consen 377 LADASLIPT----LGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYA 447 (464)
T ss_pred HHHHHHhhh----hHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHH
Confidence 222222222 22333332 346778888888899999999999999999999988887777766654
No 244
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.44 E-value=0.004 Score=56.33 Aligned_cols=133 Identities=11% Similarity=-0.058 Sum_probs=1.3
Q ss_pred cccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH-HHHHHHHHhhcC---------
Q psy10294 13 RPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV-FTIALAICSMNL--------- 81 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i-~~~~~~~~~~~~--------- 81 (226)
..-++++.+.++++. +.++..+...++..+..++.+++.+|..|-+.+-.+.++.++ ..+.........
T Consensus 23 ~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~ 102 (539)
T PF03137_consen 23 NSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASN 102 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccc
Confidence 344667777899988 788889999999999999999999886665666666666665 221111100000
Q ss_pred -------------------------------CCchHHHHHHHHHHHHHHhcccc---chhhHHhhccCCcchhhhHHHHH
Q psy10294 82 -------------------------------HWPGWIPLTIFCICFWISGYGIL---ALPWMLMSEIFPVRIRGVACGIC 127 (226)
Q Consensus 82 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~ 127 (226)
.......+.++.+.....|.|.. ++..+|+-|..+++.-+.-.|+.
T Consensus 103 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~ 182 (539)
T PF03137_consen 103 SNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGIL 182 (539)
T ss_dssp -------------------------------------------------SSS----------------------------
T ss_pred cccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhh
Confidence 01111122333333333444433 44567999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy10294 128 AAINSIVCFLVTKTYVTS 145 (226)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~ 145 (226)
+....+|..++-.+.+..
T Consensus 183 ~~~~~lGPa~Gf~lg~~~ 200 (539)
T PF03137_consen 183 YAMSILGPALGFLLGSFC 200 (539)
T ss_dssp ------------------
T ss_pred hHHhhccHHHHHHHHHHH
Confidence 887777777665555443
No 245
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.16 E-value=0.11 Score=45.66 Aligned_cols=118 Identities=13% Similarity=0.150 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHH--hhcC---CCchHHHHHHHHHHHHHHhccccch
Q psy10294 32 VLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAIC--SMNL---HWPGWIPLTIFCICFWISGYGILAL 106 (226)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (226)
...+..++.++|..+.....-+..-|+++.+..++..+..+.-... ..|. -.+.+..+.--.+........+.|.
T Consensus 260 ~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~ 339 (433)
T PF03092_consen 260 LSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPS 339 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHH
Confidence 3344555556666666555545566777766666554422110000 0010 0011111111122222223333343
Q ss_pred hhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10294 107 PWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG 150 (226)
Q Consensus 107 ~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 150 (226)
. ..++|++|+..-|+..++.....+++..++..+...+.+.++
T Consensus 340 l-vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 340 L-VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred H-HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3 467899999999999999999999999999999888877665
No 246
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.99 E-value=0.24 Score=42.51 Aligned_cols=64 Identities=8% Similarity=-0.159 Sum_probs=51.7
Q ss_pred ccchhhHHhhccCCcc---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 103 ILALPWMLMSEIFPVR---IRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 103 ~~~~~~~~~~e~~p~~---~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
.-|....+..|.++++ .|.....+.+...++|+.++....+++.++.||...|.+.++..+++.
T Consensus 50 ~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~ 116 (372)
T PF00854_consen 50 IKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLAL 116 (372)
T ss_dssp CHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHH
Confidence 4466667888998765 566677788999999999999999999999999988888777766665
No 247
>KOG2816|consensus
Probab=93.94 E-value=1.3 Score=39.38 Aligned_cols=118 Identities=15% Similarity=0.160 Sum_probs=80.3
Q ss_pred cCCCc-hHHHHHHHHHHHHHHHHHHHH-HHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHh
Q psy10294 23 FGVPL-KSEWVLVLTGVLAITGSLVSS-LTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISG 100 (226)
Q Consensus 23 ~g~~~-~~~~~~~~~~~~~~~~~~~~~-~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (226)
++.+. +.............++.++.. .+...+|.|+....|.....+......+ .+..|........ ....
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af-----~~~~w~~~~~~v~--~~~~ 344 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAF-----ATETWMMFAAGVV--VALA 344 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHH-----hccchhhhHHHHH--HHhh
Confidence 56666 445566677777778777776 7778889999777777777773333333 2334443332222 1222
Q ss_pred ccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 101 YGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT 147 (226)
Q Consensus 101 ~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (226)
....+...+.++-..+++++|+..++.+....+.+.++|.+.+.+..
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 23345566678888899999999999999999999999988876643
No 248
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=93.16 E-value=0.77 Score=40.93 Aligned_cols=133 Identities=13% Similarity=0.060 Sum_probs=79.5
Q ss_pred eecccHHHHHhh--cCCCchHHHHHHHHHHHHHHHHHHHHHHhcccCCh---H----HHHHHHHHHHH--HHHHHHHHhh
Q psy10294 11 SMRPYLVEIFQT--FGVPLKSEWVLVLTGVLAITGSLVSSLTVNKFGKR---P----MSLWSTGICFV--FTIALAICSM 79 (226)
Q Consensus 11 ~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr---~----~~~~~~~~~~i--~~~~~~~~~~ 79 (226)
++..|.....+. +|.+.+..+..++..+.-++.+++..++..|.+|| + -+-.+..++.. +++.......
T Consensus 306 sl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~ 385 (498)
T COG3104 306 SLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWF 385 (498)
T ss_pred hHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344444444332 34444667778888888888888888888775543 1 12234444443 2222221111
Q ss_pred c--CCCchHHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy10294 80 N--LHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYV 143 (226)
Q Consensus 80 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 143 (226)
. ....+...++....+.........|+.-.+++.+.|++..+..+++.......+..++..+.+
T Consensus 386 ~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 386 GGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 1 122233333334444455566667777788999999999999999998888888877766655
No 249
>KOG2615|consensus
Probab=93.03 E-value=0.38 Score=41.62 Aligned_cols=122 Identities=16% Similarity=0.146 Sum_probs=70.4
Q ss_pred hhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccC--ChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHH
Q psy10294 21 QTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFG--KRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFW 97 (226)
Q Consensus 21 ~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~G--rr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (226)
+.+|++. +.+......++.+.+....-.+..||.. -+-.+..+...+.-....... ............+..
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~-----~~~~~~l~~~s~l~s- 363 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSL-----ARTPVVLYLGSTLKS- 363 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhc-----cccchhhhHHHHHHH-
Confidence 4477777 5555556666666666666666777665 344433333333221111111 122222222222222
Q ss_pred HHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10294 98 ISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITW 148 (226)
Q Consensus 98 ~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (226)
+.+....+-...++...-|+++||+..|+....+.++-.++|.+.+....|
T Consensus 364 f~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 364 FSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 222222233456778889999999999999999999999999988765543
No 250
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.00 E-value=0.48 Score=42.49 Aligned_cols=108 Identities=14% Similarity=0.053 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHhcccCChHHHHHHHHHHHH--HHHHHHHHhhcC---CCch------------H---------HHHHHH
Q psy10294 39 LAITGSLVSSLTVNKFGKRPMSLWSTGICFV--FTIALAICSMNL---HWPG------------W---------IPLTIF 92 (226)
Q Consensus 39 ~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i--~~~~~~~~~~~~---~~~~------------~---------~~~~~~ 92 (226)
.+++...+...++|+++|++++-+....... ..++... +.+. +.+. . +...++
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slf 149 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVL-YPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLF 149 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH-hhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHH
Confidence 4456677788999999999987655554444 2222222 2211 0000 0 000011
Q ss_pred HHHHHHHhcc-ccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 93 CICFWISGYG-ILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT 147 (226)
Q Consensus 93 ~~~~~~~~~~-~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (226)
....-..+.. ..-.-|.+++|+++.++-.+-.++...+++++..++..+..+..+
T Consensus 150 Yv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 150 YVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 122458899999999999999999999999999998888777666
No 251
>KOG0637|consensus
Probab=92.42 E-value=0.096 Score=46.06 Aligned_cols=130 Identities=12% Similarity=0.149 Sum_probs=71.4
Q ss_pred cccHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhc----ccCChHHHHHHHHHHHH-HHHHHHHH-----hh-c
Q psy10294 13 RPYLVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVN----KFGKRPMSLWSTGICFV-FTIALAIC-----SM-N 80 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d----~~Grr~~~~~~~~~~~i-~~~~~~~~-----~~-~ 80 (226)
..|+|.+.++.|++. .....-.+.=+...+.+++.|..+| |+|||+.++........ .++.+... .+ .
T Consensus 52 lsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd 131 (498)
T KOG0637|consen 52 LSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGD 131 (498)
T ss_pred hccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcC
Confidence 356778888888875 2332223333445667888899999 48999888765555444 22111110 01 1
Q ss_pred CCCc--hHHHHHHHHHHHHHHhccc----cchhhHHhhccCCcchhhh-HHHHHHHHHHHHHHHHHHHHH
Q psy10294 81 LHWP--GWIPLTIFCICFWISGYGI----LALPWMLMSEIFPVRIRGV-ACGICAAINSIVCFLVTKTYV 143 (226)
Q Consensus 81 ~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~e~~p~~~R~~-~~~~~~~~~~~~~~~~~~~~~ 143 (226)
+... ....+....+.....-... +| .-++..|+.....|-+ +.+....+..+|+.++....+
T Consensus 132 ~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp-~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 132 NERKPVKPRAIVLFILGFWLLDVANNTLQGP-CRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred CcccccchHHHHHHHHHhHHHHhhhhhhhhh-HHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 1111 1122222222222222211 22 2357788887766666 888888888888888766554
No 252
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=92.42 E-value=7.4 Score=34.43 Aligned_cols=137 Identities=8% Similarity=-0.082 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHH----HHHHH-hhcCCC--chHHHHHHHH---HHHHHH
Q psy10294 30 EWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTI----ALAIC-SMNLHW--PGWIPLTIFC---ICFWIS 99 (226)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~----~~~~~-~~~~~~--~~~~~~~~~~---~~~~~~ 99 (226)
...........++.++..|.+.||..|.+....+.+.+-+... ..... ...... ..+.....+. .+....
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 120 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIE 120 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHH
Confidence 3344455556677778888899999999988877776665111 11110 111111 1122211111 111111
Q ss_pred hccccchhhHHhhcc----C--CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHhh
Q psy10294 100 GYGILALPWMLMSEI----F--PVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGIGF 166 (226)
Q Consensus 100 ~~~~~~~~~~~~~e~----~--p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 166 (226)
..+.....-..--|+ . ++..+.+..+...-.=-+...++|.+.+.+.+..+.+....+.++...+..
T Consensus 121 ~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~ 193 (432)
T PF06963_consen 121 RLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASV 193 (432)
T ss_pred HHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHH
Confidence 111111110111122 2 333344444444444446788999999999887787766666666666654
No 253
>KOG3098|consensus
Probab=91.78 E-value=2.8 Score=37.31 Aligned_cols=104 Identities=8% Similarity=-0.083 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHH
Q psy10294 31 WVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWML 110 (226)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (226)
....+.+....+.+++.+.+.|+.|.|..+.++.........+... .+.+.....-...+.+.+.-+ .---.|
T Consensus 54 ~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~------~N~y~~yfssallG~Gaallw-~GqG~y 126 (461)
T KOG3098|consen 54 YGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF------PNSYYLYFSSALLGFGAALLW-TGQGGY 126 (461)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh------cchHHHHHHHHHhhhhHHhee-ccccee
Confidence 4467777888899999999999999999999998888776655555 234544444444444444322 222347
Q ss_pred hhccCCcchhhhHHHHHHHHHHHHHHHHHHH
Q psy10294 111 MSEIFPVRIRGVACGICAAINSIVCFLVTKT 141 (226)
Q Consensus 111 ~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~ 141 (226)
.+|..+++.+.+-.++.-.....+.+++...
T Consensus 127 lt~~st~~tie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 127 LTSNSTRETIERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred hhhcCChhhHHHHHHHHHHHHHHHHHhhhHh
Confidence 8899999888888888777766666666443
No 254
>KOG4686|consensus
Probab=91.78 E-value=0.009 Score=49.55 Aligned_cols=110 Identities=10% Similarity=0.057 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHH----HHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccc
Q psy10294 31 WVLVLTGVLAITGSLVSSLTVNK-FGKRPMSLWSTGICFV----FTIALAICSMNLHWPGWIPLTIFCICFWISGYGILA 105 (226)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~l~d~-~Grr~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (226)
+..+.++.-.++-++++|++.|| +|-|..-++-+....+ +..+... ...+.+..-. +.++.|-.+
T Consensus 83 LlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~-------~aFw~M~~GR---F~FGIGgES 152 (459)
T KOG4686|consen 83 LLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGIS-------HAFWTMLAGR---FLFGIGGES 152 (459)
T ss_pred eeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHH-------HHHHHHHhhh---eeeccCchh
Confidence 34445555567778899999996 5666544332222222 1111111 1222222222 222333322
Q ss_pred h---hhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10294 106 L---PWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFG 150 (226)
Q Consensus 106 ~---~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 150 (226)
. ...|+.-+|.-|+-+.+.|+.....++|+.+.-.+.+++.+..+
T Consensus 153 lAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 153 LAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred hhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH
Confidence 2 33477778999999999999999999999887777776666543
No 255
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=91.28 E-value=1.9 Score=38.69 Aligned_cols=17 Identities=18% Similarity=0.298 Sum_probs=12.0
Q ss_pred HHHhcccCChHHHHHHH
Q psy10294 48 SLTVNKFGKRPMSLWST 64 (226)
Q Consensus 48 ~~l~d~~Grr~~~~~~~ 64 (226)
+..+.|+||||..++-.
T Consensus 61 s~y~~~~GRRKSWiiP~ 77 (544)
T PF13000_consen 61 SVYSKRIGRRKSWIIPI 77 (544)
T ss_pred hhcccccCCcchhhhHH
Confidence 34445899999887644
No 256
>KOG3626|consensus
Probab=91.02 E-value=0.57 Score=43.82 Aligned_cols=151 Identities=9% Similarity=-0.033 Sum_probs=95.6
Q ss_pred HHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH-HHHHHHHHhhcC------------
Q psy10294 16 LVEIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV-FTIALAICSMNL------------ 81 (226)
Q Consensus 16 ~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i-~~~~~~~~~~~~------------ 81 (226)
+.++-+.++++. +.++....+-++..+.....++...|.-|-+.+-++.++.++ ..+......+.+
T Consensus 120 IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~ 199 (735)
T KOG3626|consen 120 ITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQS 199 (735)
T ss_pred hhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcc
Confidence 344555678876 667777778888888888888888887777777778777776 222222110000
Q ss_pred ------------------------------CCchHHHHHHHHHHHHHHhcccc---chhhHHhhccCCcchhhhHHHHHH
Q psy10294 82 ------------------------------HWPGWIPLTIFCICFWISGYGIL---ALPWMLMSEIFPVRIRGVACGICA 128 (226)
Q Consensus 82 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~ 128 (226)
+..+..++.++++.....|.|-. +....|+-|...+++-..-.|+.+
T Consensus 200 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~ 279 (735)
T KOG3626|consen 200 VENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILY 279 (735)
T ss_pred ccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHH
Confidence 02222234344444444444443 344568888888888888889988
Q ss_pred HHHHHHHHHHHHHHHHHHHhh------------------c-hhhHHHHHHHHHHHhh
Q psy10294 129 AINSIVCFLVTKTYVTSITWF------------------G-LHGTLFIYSFITGIGF 166 (226)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~------------------g-~~~~~~~~~~~~~i~~ 166 (226)
....+|-.++-.+++.+.+.+ | |+.-|++.+.+.++..
T Consensus 280 ~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 280 SMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred HHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 888888888877777765421 1 4445666666666665
No 257
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=89.81 E-value=0.42 Score=44.31 Aligned_cols=63 Identities=13% Similarity=0.344 Sum_probs=44.7
Q ss_pred cccceecccHHHHHhh-cCCCc-hHHHHHHHHHH-HHHHHHHHHHHHhcccCC--hHHHHHHHHHHHH
Q psy10294 7 SSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGV-LAITGSLVSSLTVNKFGK--RPMSLWSTGICFV 69 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~-~~~~~~~~~~~l~d~~Gr--r~~~~~~~~~~~i 69 (226)
...+.+..|+|.++++ +|++. +.........+ +.+++.+++|+++||+++ |+.+.++.+...+
T Consensus 344 ~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~ 411 (633)
T TIGR00805 344 LAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTL 411 (633)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHH
Confidence 3445667789999875 78886 55555555454 567899999999999984 4666666555555
No 258
>KOG4332|consensus
Probab=89.79 E-value=0.37 Score=39.93 Aligned_cols=49 Identities=8% Similarity=0.049 Sum_probs=28.7
Q ss_pred HHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHH
Q psy10294 19 IFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGIC 67 (226)
Q Consensus 19 ~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~ 67 (226)
++++.|+.. +............++...+.|-++||-|||+....-++..
T Consensus 63 LYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitY 112 (454)
T KOG4332|consen 63 LYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITY 112 (454)
T ss_pred eehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHH
Confidence 344445444 3333333333344566677788999999999765444443
No 259
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=88.73 E-value=1.9 Score=37.72 Aligned_cols=116 Identities=12% Similarity=0.150 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhccccchhhHHhhccCCc
Q psy10294 38 VLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSMNLHWPGWIPLTIFCICFWISGYGILALPWMLMSEIFPV 117 (226)
Q Consensus 38 ~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 117 (226)
+-+++..+++.+..+|+.-+.-.......+.+..+.... ..+.+..+. .......+.+.+-+...-.+..+|+
T Consensus 70 ~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~-----~~~v~~~l~--Gv~las~ssg~GE~tfL~lt~~y~~ 142 (402)
T PF02487_consen 70 LPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAF-----SPSVWVRLL--GVVLASLSSGLGEVTFLSLTHFYGK 142 (402)
T ss_pred HHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheee-----ccchhHHHH--HHHHHhhhhhhhHHHHHHHHHhcCc
Confidence 344555666777778765333333333333332222233 122233333 3333344444444443333455664
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch--hhHHHHHHHHHHHh
Q psy10294 118 RIRGVACGICAAINSIVCFLVTKTYVTSITWFGL--HGTLFIYSFITGIG 165 (226)
Q Consensus 118 ~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~i~ 165 (226)
. ..+-...+...++.+++.....+.+ .|+ |.++.....++.+.
T Consensus 143 ~----~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~ 187 (402)
T PF02487_consen 143 S----SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIF 187 (402)
T ss_pred c----ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHH
Confidence 2 2344444455566666666555544 554 55666666666544
No 260
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=88.28 E-value=0.14 Score=46.40 Aligned_cols=143 Identities=17% Similarity=0.186 Sum_probs=0.0
Q ss_pred cccccceecccHHHHHhh-cCCCc-hHHHHHHHHH-HHHHHHHHHHHHHhcccC--ChHHHHHHHHHHHHHHHH---HH-
Q psy10294 5 FNSSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTG-VLAITGSLVSSLTVNKFG--KRPMSLWSTGICFVFTIA---LA- 75 (226)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~-~~~~~~~~~~~~l~d~~G--rr~~~~~~~~~~~i~~~~---~~- 75 (226)
+......+..|.|.+.|. ++.+. ++........ .+..+|.+++|++..|+. .|+...+..+...+..+. .+
T Consensus 317 ~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~ 396 (539)
T PF03137_consen 317 ESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFF 396 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHe
Confidence 344566778899999875 78876 5544443333 355789999999999874 355544444444331111 11
Q ss_pred -HH-----------hhc-----C--------------------------C-CchHHHHHHH-HHHHHHHhccccchhhHH
Q psy10294 76 -IC-----------SMN-----L--------------------------H-WPGWIPLTIF-CICFWISGYGILALPWML 110 (226)
Q Consensus 76 -~~-----------~~~-----~--------------------------~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 110 (226)
.| +.. . . ......+... .......+....|.. ..
T Consensus 397 ~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~-~i 475 (539)
T PF03137_consen 397 LGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPST-LI 475 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchh-ee
Confidence 11 000 0 0 0111111111 111122222222333 23
Q ss_pred hhccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHHHh
Q psy10294 111 MSEIFPVRIRGVACGICAAINSI-VCFLVTKTYVTSITW 148 (226)
Q Consensus 111 ~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 148 (226)
.-...|+++|+.|.|+.....++ |.+-+|.+++.++|.
T Consensus 476 ~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 476 TLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ---------------------------------------
T ss_pred eeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 34678999999999999888775 567789999988875
No 261
>KOG1237|consensus
Probab=88.18 E-value=21 Score=32.83 Aligned_cols=149 Identities=10% Similarity=-0.016 Sum_probs=81.7
Q ss_pred HHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHH--HHHHhhc----------C--
Q psy10294 18 EIFQTFGVPL-KSEWVLVLTGVLAITGSLVSSLTVNK-FGKRPMSLWSTGICFVFTIA--LAICSMN----------L-- 81 (226)
Q Consensus 18 ~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~d~-~Grr~~~~~~~~~~~i~~~~--~~~~~~~----------~-- 81 (226)
++..+++.+. .+........-......+.+++++|. +||-+++.++..+..+.... ....... .
T Consensus 63 ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~ 142 (571)
T KOG1237|consen 63 YLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGN 142 (571)
T ss_pred HHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCC
Confidence 3344455554 33333444444556778899999996 58989888888877763222 2221110 0
Q ss_pred --CCchH--HHHHHHHHHHHHHhc-cccchhhHHhhccCCc---ch-hh--hHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10294 82 --HWPGW--IPLTIFCICFWISGY-GILALPWMLMSEIFPV---RI-RG--VACGICAAINSIVCFLVTKTYVTSITWFG 150 (226)
Q Consensus 82 --~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~p~---~~-R~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 150 (226)
..+.. ..+....+.....|. +.-+....+-+|.++. +. +. .-..+.+.....+..++..+..+..++.+
T Consensus 143 ~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~ 222 (571)
T KOG1237|consen 143 VCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVG 222 (571)
T ss_pred cccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhccc
Confidence 00111 111222222222122 2234455677888882 22 22 34456666677777888777777778888
Q ss_pred hhhHHHHHHHHHHHhh
Q psy10294 151 LHGTLFIYSFITGIGF 166 (226)
Q Consensus 151 ~~~~~~~~~~~~~i~~ 166 (226)
|...|.+......+..
T Consensus 223 w~lgf~i~~~~~~lai 238 (571)
T KOG1237|consen 223 WKLGFGIPTVLNALAI 238 (571)
T ss_pred ceeeccHHHHHHHHHH
Confidence 8776666655554443
No 262
>KOG3098|consensus
Probab=88.06 E-value=19 Score=32.16 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc---ccCChHHHHHHHHHHHHHHHHHHHHhhcCC------------CchHHHHHHHHHH
Q psy10294 31 WVLVLTGVLAITGSLVSSLTVN---KFGKRPMSLWSTGICFVFTIALAICSMNLH------------WPGWIPLTIFCIC 95 (226)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~l~d---~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 95 (226)
......+++..+++...+.+.+ ++||++.+.++..+..+..+.......++. .+.......+..+
T Consensus 283 i~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l 362 (461)
T KOG3098|consen 283 IYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFL 362 (461)
T ss_pred HHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHH
Confidence 3445566677777777777775 578999888888777773333333122111 0112222222233
Q ss_pred HHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy10294 96 FWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYV 143 (226)
Q Consensus 96 ~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 143 (226)
.+..-..+....+.+..+.. ++.|..+.++.-.-..+.+.+.....+
T Consensus 363 ~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 363 LGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 33333334566677888888 556777777776666666655544444
No 263
>KOG3574|consensus
Probab=85.94 E-value=3.6 Score=35.89 Aligned_cols=44 Identities=18% Similarity=0.239 Sum_probs=26.9
Q ss_pred cHHHHHhhcCCCc-hHHHHHHHHHHHH--HHHHHHHHHHhc-----ccCChHHHHH
Q psy10294 15 YLVEIFQTFGVPL-KSEWVLVLTGVLA--ITGSLVSSLTVN-----KFGKRPMSLW 62 (226)
Q Consensus 15 ~~~~~~~~~g~~~-~~~~~~~~~~~~~--~~~~~~~~~l~d-----~~Grr~~~~~ 62 (226)
-.|.+++.-|.|- +.. .+.+.. .---+++.+++| |+|||+..++
T Consensus 52 ~iP~lL~ak~vSyt~~a----~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTSQA----IFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred hhHHHhcCCCcchhhhh----hhhhhhhHHHHHHHHHhhhHHHHHHhhccccceee
Confidence 5677777656654 222 222222 223567888888 9999998765
No 264
>PRK03612 spermidine synthase; Provisional
Probab=83.37 E-value=28 Score=31.63 Aligned_cols=42 Identities=12% Similarity=0.108 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH-HhhchhhHHHHHHHHH
Q psy10294 121 GVACGICAAINSIVCFLVTKTYVTSI-TWFGLHGTLFIYSFIT 162 (226)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~ 162 (226)
+...|-.+..+.+|+.+++.+.+++. ..+|...+.++.+.+.
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~ 186 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLN 186 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 55677888888889998888877654 4677655555444443
No 265
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=82.09 E-value=23 Score=30.99 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=31.6
Q ss_pred hhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 107 PWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT 147 (226)
Q Consensus 107 ~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (226)
.+..+.|-.|+++|-.++|.....-.+|..++..+.-.+..
T Consensus 356 tF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 356 TFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 44456677899999999999998888888887776655443
No 266
>KOG1479|consensus
Probab=73.59 E-value=41 Score=29.51 Aligned_cols=40 Identities=13% Similarity=-0.135 Sum_probs=16.8
Q ss_pred ceecccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHH
Q psy10294 10 VSMRPYLVEIFQTFGVPLKSEWVLVLTGVLAITGSLVSSL 49 (226)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (226)
+++..-.+++.+++-.+..+........+.+.+..++...
T Consensus 35 N~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~ 74 (406)
T KOG1479|consen 35 NMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNL 74 (406)
T ss_pred HhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445566655433222333333334444444444433
No 267
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=72.28 E-value=14 Score=27.70 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=25.7
Q ss_pred HHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHH
Q psy10294 97 WISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIV 134 (226)
Q Consensus 97 ~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~ 134 (226)
++++.|...+.|-..+-...++..|...|+-..-.+++
T Consensus 105 ~~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~ 142 (153)
T PF11947_consen 105 VFFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWG 142 (153)
T ss_pred HHHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHH
Confidence 34444555667777777788888898888876655543
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=71.90 E-value=45 Score=29.54 Aligned_cols=27 Identities=7% Similarity=-0.097 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHhcccCChHHHHHHHHH
Q psy10294 40 AITGSLVSSLTVNKFGKRPMSLWSTGI 66 (226)
Q Consensus 40 ~~~~~~~~~~l~d~~Grr~~~~~~~~~ 66 (226)
.++..+....+..|+..|.-+..+.++
T Consensus 58 ~l~~~~~~~~~~~~i~~~~Ri~~~lv~ 84 (437)
T TIGR00939 58 SLLFNSLNLFLIFRIPVTVRLLGGLVI 84 (437)
T ss_pred HHHHHHHHHHHhhccCccchhHHHHHH
Confidence 334444444555566554444444443
No 269
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=65.01 E-value=94 Score=28.12 Aligned_cols=108 Identities=14% Similarity=0.104 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHhcccCChHHHHHHHHHHHH--HHHHHHHHhhcC---------------CCc-h--H-------HHHHH
Q psy10294 39 LAITGSLVSSLTVNKFGKRPMSLWSTGICFV--FTIALAICSMNL---------------HWP-G--W-------IPLTI 91 (226)
Q Consensus 39 ~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i--~~~~~~~~~~~~---------------~~~-~--~-------~~~~~ 91 (226)
.+++..++..++.++.-|++++-.-...... .+++... +.+. ..+ . + +....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi-~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~ 152 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVI-YPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSL 152 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHH-hccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHH
Confidence 4566777888899999998887655544444 2222222 2110 011 1 0 11111
Q ss_pred HHHHH-HHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10294 92 FCICF-WISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSIT 147 (226)
Q Consensus 92 ~~~~~-~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (226)
+.... ........-.-|..++|++..++-.+-.++.+.+++++..++..+..++.+
T Consensus 153 ~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 153 FYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11111 111112223467789999999999999999999999999988888777665
No 270
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=55.17 E-value=63 Score=22.00 Aligned_cols=24 Identities=13% Similarity=0.170 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHhcccCChHH
Q psy10294 36 TGVLAITGSLVSSLTVNKFGKRPM 59 (226)
Q Consensus 36 ~~~~~~~~~~~~~~l~d~~Grr~~ 59 (226)
..++..++..+.+.+.|..|.+..
T Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~ 119 (141)
T TIGR00880 96 IALGPLLGPPLGGVLAQFLGWRAP 119 (141)
T ss_pred HHHHHHHhHHhHHHHhcccchHHH
Confidence 334444444444444444444443
No 271
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=50.66 E-value=1.8e+02 Score=25.77 Aligned_cols=55 Identities=15% Similarity=0.064 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHhccccchhhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHH
Q psy10294 86 WIPLTIFCICFWISGYGILALPWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKT 141 (226)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~ 141 (226)
+..++....++...|. ..+...++..+..++++|..+..+...+..+|-..++.+
T Consensus 373 ~~~~~~~~l~gltnGy-~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 373 AYFIILMLLFGFSNGY-LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHhhhH-HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444443333333322 345566788888999999988888887777777766654
No 272
>KOG1479|consensus
Probab=47.21 E-value=1.8e+02 Score=25.64 Aligned_cols=102 Identities=11% Similarity=0.021 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhh----cCCCchHHHHHHHHHHHHHHhccccchhhHHh
Q psy10294 36 TGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFVFTIALAICSM----NLHWPGWIPLTIFCICFWISGYGILALPWMLM 111 (226)
Q Consensus 36 ~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (226)
.++...+|.+...+.-++=.|+.......-...+ -....|.. .-....++.......++...| -..+...++.
T Consensus 292 fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfi--PlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnG-Yltsl~m~~a 368 (406)
T KOG1479|consen 292 FNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFI--PLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNG-YLTSLIMMYA 368 (406)
T ss_pred hHHHHHhhhhhhhcccCCCCceehHHHHHHHHHH--HHHHHhccCCCCceecCchHHHHHHHHHHhccc-hHhhheehhc
Confidence 6667777766666655443233322222222222 11121110 001223333333333332222 2345666788
Q ss_pred hccCCcchhhhHHHHHHHHHHHHHHHHHH
Q psy10294 112 SEIFPVRIRGVACGICAAINSIVCFLVTK 140 (226)
Q Consensus 112 ~e~~p~~~R~~~~~~~~~~~~~~~~~~~~ 140 (226)
++..|++++-.+..+...+...|-..+..
T Consensus 369 Pk~v~~~e~e~aG~~m~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 369 PKQVKPSEKEAAGNLMVFFLVGGLALGSL 397 (406)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence 89999988887776666655555555543
No 273
>KOG3626|consensus
Probab=36.22 E-value=40 Score=31.99 Aligned_cols=65 Identities=18% Similarity=0.280 Sum_probs=43.2
Q ss_pred cccccceecccHHHHHhh-cCCCc-hHHHHHHHHHH-HHHHHHHHHHHHhcccC--ChHHHHHHHHHHHH
Q psy10294 5 FNSSFVSMRPYLVEIFQT-FGVPL-KSEWVLVLTGV-LAITGSLVSSLTVNKFG--KRPMSLWSTGICFV 69 (226)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~-~~~~~~~~~~~l~d~~G--rr~~~~~~~~~~~i 69 (226)
+...+..+..|+|.+++. +|.+. .+........+ ...+|.+++|++..|+. -|.+..+..+...+
T Consensus 404 ~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 404 ESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 344566778899999975 78886 55555544343 44678899999999874 35555544444444
No 274
>COG4769 Predicted membrane protein [Function unknown]
Probab=35.10 E-value=1.4e+02 Score=22.84 Aligned_cols=26 Identities=19% Similarity=0.170 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHhcccCChHHHHH
Q psy10294 37 GVLAITGSLVSSLTVNKFGKRPMSLW 62 (226)
Q Consensus 37 ~~~~~~~~~~~~~l~d~~Grr~~~~~ 62 (226)
+..+.+.+....++..++|.|...++
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~l 108 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLL 108 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeee
Confidence 33344445555677778887766443
No 275
>KOG2325|consensus
Probab=28.39 E-value=21 Score=32.17 Aligned_cols=58 Identities=19% Similarity=0.092 Sum_probs=46.2
Q ss_pred hhHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q psy10294 107 PWMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHGTLFIYSFITGI 164 (226)
Q Consensus 107 ~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 164 (226)
..+.-+|+..++.+++..++....+..+..++|..........|.++.+.+.....++
T Consensus 409 ~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~ 466 (488)
T KOG2325|consen 409 LDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLV 466 (488)
T ss_pred HHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHH
Confidence 3456779999999999999999999999999999888888888887665554444433
No 276
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=27.11 E-value=2.6e+02 Score=20.58 Aligned_cols=23 Identities=22% Similarity=0.440 Sum_probs=17.0
Q ss_pred hhccCCcchhhhHHHHHHHHHHH
Q psy10294 111 MSEIFPVRIRGVACGICAAINSI 133 (226)
Q Consensus 111 ~~e~~p~~~R~~~~~~~~~~~~~ 133 (226)
..|++|+..|....+........
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHH
Confidence 45999999999877766654443
No 277
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.56 E-value=2.5e+02 Score=19.84 Aligned_cols=34 Identities=21% Similarity=0.089 Sum_probs=26.7
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10294 116 PVRIRGVACGICAAINSIVCFLVTKTYVTSITWF 149 (226)
Q Consensus 116 p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (226)
.++.++.+.++-...-.+++++.....+++.+++
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567788888877777888888888888888875
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=25.40 E-value=4.8e+02 Score=23.09 Aligned_cols=54 Identities=9% Similarity=0.135 Sum_probs=31.2
Q ss_pred cccceecccHHHHHhhcCCCc-h---HHHHHHHHHHHHHHHHHHHHHHhcccCChHHH
Q psy10294 7 SSFVSMRPYLVEIFQTFGVPL-K---SEWVLVLTGVLAITGSLVSSLTVNKFGKRPMS 60 (226)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~-~---~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~ 60 (226)
+|.+-+..|...+.++..-++ + -+..-....+.+.++++..|++..++.+-.-+
T Consensus 261 cgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l 318 (412)
T PF01770_consen 261 CGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGEL 318 (412)
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHH
Confidence 344455566666666651111 1 13445566666777888888886666664433
No 279
>TIGR00210 gltS sodium--glutamate symport carrier (gltS).
Probab=22.38 E-value=1.1e+02 Score=26.86 Aligned_cols=40 Identities=8% Similarity=0.210 Sum_probs=24.0
Q ss_pred cccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10294 13 RPYLVEIFQTFGVPLKSEWVLVLTGVLAITGSLVSSLTVN 52 (226)
Q Consensus 13 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~d 52 (226)
..+-|.+.+++|++.-.........++-+.|+++++++.+
T Consensus 141 aA~g~~f~e~~G~~~a~~lgla~AT~GLv~g~liGgpi~~ 180 (398)
T TIGR00210 141 AAWSPVFYDNYGFRNATEIAIACATFGLVFGGIIGGPVAK 180 (398)
T ss_pred HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456665566888864445555555555666666665554
No 280
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=21.73 E-value=1.2e+02 Score=26.28 Aligned_cols=38 Identities=11% Similarity=0.095 Sum_probs=18.3
Q ss_pred cHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10294 15 YLVEIFQTFGVPLKSEWVLVLTGVLAITGSLVSSLTVN 52 (226)
Q Consensus 15 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~d 52 (226)
+-|.+.+.+|++.-.........++-+.|.++++++.+
T Consensus 143 ~g~~fe~~~G~~~a~~vg~a~AT~Glv~G~liGgpi~~ 180 (368)
T PF03616_consen 143 FGPTFEELYGWEGATSVGMAAATFGLVVGGLIGGPIAN 180 (368)
T ss_pred HHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444434588763334444444444445555555443
No 281
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=21.54 E-value=2.8e+02 Score=20.61 Aligned_cols=23 Identities=17% Similarity=0.315 Sum_probs=16.8
Q ss_pred hhccCCcchhhhHHHHHHHHHHH
Q psy10294 111 MSEIFPVRIRGVACGICAAINSI 133 (226)
Q Consensus 111 ~~e~~p~~~R~~~~~~~~~~~~~ 133 (226)
..|++|+..|....+........
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s~ 80 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTNF 80 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHH
Confidence 45999999999877766554443
No 282
>KOG3574|consensus
Probab=21.20 E-value=2.1e+02 Score=25.48 Aligned_cols=46 Identities=7% Similarity=-0.042 Sum_probs=38.7
Q ss_pred hHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh
Q psy10294 108 WMLMSEIFPVRIRGVACGICAAINSIVCFLVTKTYVTSITWFGLHG 153 (226)
Q Consensus 108 ~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 153 (226)
.+.-+.+.|+..-|+-+.+.+...++|+-.-..+..++.+.++++-
T Consensus 391 maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~ 436 (510)
T KOG3574|consen 391 MAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQ 436 (510)
T ss_pred HHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceee
Confidence 3466788999999999999999999999888888888888776653
No 283
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=20.13 E-value=3.2e+02 Score=19.15 Aligned_cols=41 Identities=7% Similarity=0.023 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q psy10294 29 SEWVLVLTGVLAITGSLVSSLTVNKFGKRPMSLWSTGICFV 69 (226)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~l~d~~Grr~~~~~~~~~~~i 69 (226)
+........+...++.+++|..+-|.-++|-++.+.....+
T Consensus 36 e~~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~Gl~ 76 (116)
T PF12670_consen 36 ESILPWLVVIIYILSVFIGGFYAGRKAGSKGWLHGLLVGLL 76 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 34445555666677778888777777666667776666555
Done!