Query psy10295
Match_columns 115
No_of_seqs 101 out of 166
Neff 5.4
Searched_HMMs 13730
Date Fri Aug 16 22:48:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10295.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10295hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fp3a_ a.102.1.3 (A:) N-acyl- 24.1 71 0.0052 22.6 5.6 66 15-80 288-360 (402)
2 d1vhra_ c.45.1.1 (A:) VH1-rela 20.3 41 0.003 21.6 3.2 29 39-67 117-150 (178)
3 d3d1ma1 d.65.1.2 (A:41-188) So 18.8 26 0.0019 23.5 1.9 38 57-97 64-103 (148)
4 d1yqha1 d.58.48.1 (A:1-101) Hy 15.6 50 0.0037 20.1 2.6 23 54-77 48-70 (101)
5 d2gbsa1 b.122.1.8 (A:2-137) Hy 15.5 10 0.00075 24.9 -0.9 22 80-101 22-43 (136)
6 d1lxja_ d.58.48.1 (A:) Hypothe 15.5 40 0.0029 20.8 2.1 23 54-77 50-72 (104)
7 d1rzhh2 f.23.10.1 (H:11-35) Ph 14.9 33 0.0024 16.4 1.2 10 98-107 3-12 (26)
8 d1szna1 b.71.1.1 (A:315-417) M 14.5 29 0.0021 21.3 1.2 16 27-42 13-30 (103)
9 d1s6la2 d.357.1.2 (A:81-212) A 13.8 68 0.005 20.5 3.0 24 57-82 109-132 (132)
10 d1m2sa_ g.3.7.2 (A:) Bmtx3 {Bu 13.7 18 0.0013 18.7 0.0 15 27-41 2-16 (37)
No 1
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=24.06 E-value=71 Score=22.65 Aligned_cols=66 Identities=12% Similarity=0.017 Sum_probs=37.7
Q ss_pred CccccccccCCCCCccCCCCCcc-cccchHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHh-----hcCcccc
Q psy10295 15 GSMGAVNGMKPNGDRDRSAIQSE-EVWTGVTYLLSAAMLY-EGNVDEAWTTAGGLYRTVYE-----RTGLGFE 80 (115)
Q Consensus 15 g~~GavNg~~p~G~~d~~~~qs~-EvWtGv~y~vAa~mi~-~Gm~ee~~~~a~~~~~~~y~-----~~G~~~~ 80 (115)
...|+.+...++|.+........ -.|+=.+...|+..++ .-..++.++.++.+++-+++ +.|.+|.
T Consensus 288 ~~ggl~~~~~~~g~~~~~~~~~~k~~W~qaE~i~a~l~ly~~tgd~~~l~~a~~l~~~~~~~f~D~~~G~W~~ 360 (402)
T d1fp3a_ 288 DHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTFRQFRDPEYGEWFG 360 (402)
T ss_dssp TTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCC
T ss_pred CCCeEEEEecCCCCccccccchHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhCCCCCCCeeEe
Confidence 34578888888887765444333 4455555444444343 32334457777777766554 2565554
No 2
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.27 E-value=41 Score=21.57 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=20.9
Q ss_pred ccchH----HHHHHHHHHHcCC-hHHHHHHHHHH
Q psy10295 39 VWTGV----TYLLSAAMLYEGN-VDEAWTTAGGL 67 (115)
Q Consensus 39 vWtGv----~y~vAa~mi~~Gm-~ee~~~~a~~~ 67 (115)
|+.|+ +..+|-.|...|| .++|++.++..
T Consensus 117 C~~G~sRS~~vv~aYLm~~~~~s~~~A~~~vr~~ 150 (178)
T d1vhra_ 117 CREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQN 150 (178)
T ss_dssp CSSSSSHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred cCCCCccHHHHHHHHHHHhcCCCHHHHHHHHHhC
Confidence 66776 5666667778898 57788877653
No 3
>d3d1ma1 d.65.1.2 (A:41-188) Sonic hedgehog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=18.78 E-value=26 Score=23.45 Aligned_cols=38 Identities=21% Similarity=0.219 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHHHHHhhcCccccCCcccccCCcc--ccCccc
Q psy10295 57 VDEAWTTAGGLYRTVYERTGLGFETPEGLTGDKTY--RSGGYM 97 (115)
Q Consensus 57 ~ee~~~~a~~~~~~~y~~~G~~~~tPea~~~~~~~--r~~~Y~ 97 (115)
.+.=-.+|..+.++ |. |...+--|+|++.+.+ .+.||=
T Consensus 64 k~kLn~LA~~Vmn~-w~--gvkLrV~eaWde~~~h~~~SLHyE 103 (148)
T d3d1ma1 64 KDKLNALAISVMNQ-WP--GVKLRVTEGWDEDGHHSEESLHYE 103 (148)
T ss_dssp HHHHHHHHHHHHHH-ST--TCCEEEEESSCCSCCSCTTCGGGG
T ss_pred HHHHHHHHHHHHHh-CC--CceEEEEeeeccCCCcCccccccc
Confidence 44444566666665 53 8889999999999766 567773
No 4
>d1yqha1 d.58.48.1 (A:1-101) Hypothetical protein BC0424 {Bacillus cereus [TaxId: 1396]}
Probab=15.58 E-value=50 Score=20.09 Aligned_cols=23 Identities=17% Similarity=0.271 Sum_probs=20.0
Q ss_pred cCChHHHHHHHHHHHHHHHhhcCc
Q psy10295 54 EGNVDEAWTTAGGLYRTVYERTGL 77 (115)
Q Consensus 54 ~Gm~ee~~~~a~~~~~~~y~~~G~ 77 (115)
||..++-+++++.+++.+.+ .|.
T Consensus 48 EGe~d~v~~~v~~~~e~~~~-~G~ 70 (101)
T d1yqha1 48 EGELDVLLDVVKRAQQACVD-AGA 70 (101)
T ss_dssp EECHHHHHHHHHHHHHHHHH-TTC
T ss_pred eCCHHHHHHHHHHHHHHHHH-cCC
Confidence 78899999999999999877 564
No 5
>d2gbsa1 b.122.1.8 (A:2-137) Hypothetical protein RPA0253 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=15.50 E-value=10 Score=24.94 Aligned_cols=22 Identities=23% Similarity=0.149 Sum_probs=18.2
Q ss_pred cCCcccccCCccccCcccchhH
Q psy10295 80 ETPEGLTGDKTYRSGGYMRALA 101 (115)
Q Consensus 80 ~tPea~~~~~~~r~~~Y~R~la 101 (115)
++.|.|+...+|-+-.|||.|.
T Consensus 22 ~~~~~WdGVRNyqArn~mr~M~ 43 (136)
T d2gbsa1 22 AAGEAWTGVRNHSAKLHMVAMR 43 (136)
T ss_dssp TTCEECCCCCCHHHHHHHHHCC
T ss_pred CCCCcCCCcccHHHHHHHHHhc
Confidence 4556699999998889999875
No 6
>d1lxja_ d.58.48.1 (A:) Hypothetical protein YB1001C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=15.47 E-value=40 Score=20.83 Aligned_cols=23 Identities=26% Similarity=0.287 Sum_probs=20.2
Q ss_pred cCChHHHHHHHHHHHHHHHhhcCc
Q psy10295 54 EGNVDEAWTTAGGLYRTVYERTGL 77 (115)
Q Consensus 54 ~Gm~ee~~~~a~~~~~~~y~~~G~ 77 (115)
||..+|-|++++.+++.+.+ .|.
T Consensus 50 EG~~del~~~v~~~he~~~~-~G~ 72 (104)
T d1lxja_ 50 EGPWDDVMGLIGEIHEYGHE-KGY 72 (104)
T ss_dssp EEEHHHHHHHHHHHHHHHHH-TTC
T ss_pred ECCHHHHHHHHHHHHHHHHH-cCC
Confidence 78899999999999999887 564
No 7
>d1rzhh2 f.23.10.1 (H:11-35) Photosystem II reaction centre subunit H, transmembrane region {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=14.95 E-value=33 Score=16.37 Aligned_cols=10 Identities=30% Similarity=0.468 Sum_probs=7.3
Q ss_pred chhHHHHHHH
Q psy10295 98 RALAVYAMQD 107 (115)
Q Consensus 98 R~laiWa~~~ 107 (115)
-++|||.++.
T Consensus 3 aslaiw~fw~ 12 (26)
T d1rzhh2 3 ASLAIYSFWI 12 (26)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3689998754
No 8
>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]}
Probab=14.49 E-value=29 Score=21.33 Aligned_cols=16 Identities=25% Similarity=0.391 Sum_probs=9.9
Q ss_pred CCccCCCCCcc--cccch
Q psy10295 27 GDRDRSAIQSE--EVWTG 42 (115)
Q Consensus 27 G~~d~~~~qs~--EvWtG 42 (115)
+.||-.+.+++ |+|.|
T Consensus 13 ~~pd~~~~~~~~~evWag 30 (103)
T d1szna1 13 INPDWTFNVTYPAEFWAG 30 (103)
T ss_dssp SSCTTCCCSSSCCCEEEE
T ss_pred CCCCcccCCCCCceEEee
Confidence 45555555554 89976
No 9
>d1s6la2 d.357.1.2 (A:81-212) Alkylmercury lyase MerB {Escherichia coli [TaxId: 562]}
Probab=13.80 E-value=68 Score=20.48 Aligned_cols=24 Identities=25% Similarity=0.390 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHHHhhcCccccCC
Q psy10295 57 VDEAWTTAGGLYRTVYERTGLGFETP 82 (115)
Q Consensus 57 ~ee~~~~a~~~~~~~y~~~G~~~~tP 82 (115)
.+|||++++.++..+-+ -+.-++|
T Consensus 109 l~eA~~lg~~~~~~lL~--~~~~~~~ 132 (132)
T d1s6la2 109 VHEAFGLGQEFNRHLLQ--TMSSRTP 132 (132)
T ss_dssp HHHHHHHHHHHHHHHHC--SSCCCCC
T ss_pred HHHHHHHHHHHHHHHHh--hccccCC
Confidence 68999999999998876 3345555
No 10
>d1m2sa_ g.3.7.2 (A:) Bmtx3 {Buthus martensii karsch [TaxId: 34649]}
Probab=13.72 E-value=18 Score=18.73 Aligned_cols=15 Identities=40% Similarity=0.601 Sum_probs=10.6
Q ss_pred CCccCCCCCcccccc
Q psy10295 27 GDRDRSAIQSEEVWT 41 (115)
Q Consensus 27 G~~d~~~~qs~EvWt 41 (115)
|-+|.....|+|+|+
T Consensus 2 glIdvkC~as~eCW~ 16 (37)
T d1m2sa_ 2 GLIDVKCFASSECWT 16 (37)
T ss_dssp CCBCSCCSCHHHHHH
T ss_pred CccceeeechHHHHH
Confidence 446666777888886
Done!