BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy10296
         (116 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9HCG7|GBA2_HUMAN Non-lysosomal glucosylceramidase OS=Homo sapiens GN=GBA2 PE=1 SV=2
          Length = 927

 Score =  105 bits (262), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 54/106 (50%), Positives = 73/106 (68%), Gaps = 4/106 (3%)

Query: 1   MADQLCGYLFLKASGV---NTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNG 57
           M+DQ  G  FLKA G+   +TE +FP+ ++ RAL TIF  NV+ F  G+MGAVNGM+P+G
Sbjct: 750 MSDQCAGQWFLKACGLGEGDTE-VFPTQHVVRALQTIFELNVQAFAGGAMGAVNGMQPHG 808

Query: 58  DRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLRE 103
             D+S++QS+EVW GV Y L+A M+ EG   E + TA G YR + E
Sbjct: 809 VPDKSSVQSDEVWVGVVYGLAATMIQEGLTWEGFQTAEGCYRTVWE 854


>sp|Q5M868|GBA2_RAT Non-lysosomal glucosylceramidase OS=Rattus norvegicus GN=Gba2 PE=2
           SV=2
          Length = 912

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 73/106 (68%), Gaps = 4/106 (3%)

Query: 1   MADQLCGYLFLKASGV---NTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNG 57
           M+DQ  G  FL+A G+   +TE +FP+ ++ RAL TIF  NV+ F  G+MGAVNGM+P+G
Sbjct: 741 MSDQCAGQWFLRACGLGEGDTE-VFPTLHVVRALKTIFELNVQAFAGGAMGAVNGMQPHG 799

Query: 58  DRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLRE 103
             DRS++QS+EVW GV Y L+A M+ EG   E + TA G YR + E
Sbjct: 800 VPDRSSVQSDEVWVGVVYGLAATMIQEGLTWEGFRTAEGCYRTVWE 845


>sp|Q69ZF3|GBA2_MOUSE Non-lysosomal glucosylceramidase OS=Mus musculus GN=Gba2 PE=2 SV=2
          Length = 918

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 4/106 (3%)

Query: 1   MADQLCGYLFLKASGV---NTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNG 57
           M+DQ  G  FL+A G+   +TE +FP+ ++ RAL TIF  NV+ F  G+MGAVNGM P+G
Sbjct: 741 MSDQCAGQWFLRACGLGEGDTE-VFPTLHVVRALQTIFELNVQAFAGGAMGAVNGMHPHG 799

Query: 58  DRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLRE 103
             DRS++QS+EVW GV Y L+A M+ EG   E + TA G YR + E
Sbjct: 800 VPDRSSVQSDEVWVGVVYGLAATMIQEGLTWEGFRTAEGCYRTVWE 845


>sp|Q7KT91|C3390_DROME Non-lysosomal glucosylceramidase OS=Drosophila melanogaster
           GN=CG33090 PE=1 SV=1
          Length = 948

 Score =  102 bits (255), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 9/123 (7%)

Query: 1   MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPN---- 56
           MADQLCG+ +LK+ G + E I+P  N+  AL  I+  NV GF  G++GA NG   N    
Sbjct: 796 MADQLCGHWYLKSCGFDYE-IYPKENVRTALKRIYDNNVMGFHEGNIGAANGFIANASEP 854

Query: 57  ---GDRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLREDRVSGCETAP 113
              G  D S IQ+EEVW GV Y L+A M+ EG  +EA+ TAGG+Y+ L + R+      P
Sbjct: 855 TKPGHVDNSNIQAEEVWPGVVYALAATMIQEGMFEEAFQTAGGMYKTLSQ-RIGMNFETP 913

Query: 114 EGV 116
           E +
Sbjct: 914 EAL 916


>sp|Q9SSN0|RHD31_ARATH Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana
           GN=At1g72960 PE=2 SV=2
          Length = 795

 Score = 30.8 bits (68), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 82  LYEGNVDEAWTTAGGLYRRLREDRVSGCETAPEG 115
           L +G  DE W+T   L+RR  E  VSG  +A  G
Sbjct: 477 LLDGANDETWSTVKKLHRRETESAVSGLSSALAG 510


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.132    0.389 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,192,824
Number of Sequences: 539616
Number of extensions: 1438904
Number of successful extensions: 2875
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2865
Number of HSP's gapped (non-prelim): 9
length of query: 116
length of database: 191,569,459
effective HSP length: 84
effective length of query: 32
effective length of database: 146,241,715
effective search space: 4679734880
effective search space used: 4679734880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)