Query psy1030
Match_columns 114
No_of_seqs 188 out of 1123
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 22:55:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1030.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1030hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cbz_A Dishevelled-2; PDZ doma 99.4 1.8E-12 6.2E-17 86.4 8.3 62 1-62 41-102 (108)
2 1r6j_A Syntenin 1; PDZ, membra 99.3 2E-12 6.7E-17 83.7 6.7 50 1-54 31-80 (82)
3 3gge_A PDZ domain-containing p 99.3 4.7E-12 1.6E-16 84.3 7.9 54 1-55 36-89 (95)
4 3e17_A Tight junction protein 99.3 1.3E-11 4.4E-16 79.5 7.0 52 1-55 29-80 (88)
5 3b76_A E3 ubiquitin-protein li 99.2 2.3E-11 7.9E-16 82.7 6.4 52 1-55 61-112 (118)
6 1wg6_A Hypothetical protein (r 99.2 3.7E-11 1.3E-15 82.3 6.8 57 1-57 63-123 (127)
7 1kwa_A Hcask/LIN-2 protein; PD 99.2 4.8E-11 1.6E-15 76.8 6.6 52 1-55 33-84 (88)
8 2iwo_A Multiple PDZ domain pro 99.2 6.1E-11 2.1E-15 80.6 7.4 54 1-57 61-114 (120)
9 2la8_A Inactivation-NO-after-p 99.2 8.7E-11 3E-15 78.3 8.0 52 1-55 33-84 (106)
10 3egg_C Spinophilin; PP1, serin 99.2 4.9E-11 1.7E-15 86.0 7.2 51 1-54 119-169 (170)
11 3o46_A Maguk P55 subfamily mem 99.2 6.3E-11 2.1E-15 76.4 6.9 52 1-55 36-87 (93)
12 2dc2_A GOPC, golgi associated 99.2 6.4E-11 2.2E-15 78.1 7.0 54 1-57 43-96 (103)
13 2d92_A INAD-like protein; PDZ 99.2 5.8E-11 2E-15 78.8 6.8 54 1-56 52-105 (108)
14 1wi4_A Synip, syntaxin binding 99.2 7E-11 2.4E-15 78.9 6.9 56 1-56 49-105 (109)
15 4amh_A Disks large homolog 1; 99.2 8.8E-11 3E-15 77.9 7.3 53 1-56 40-92 (106)
16 2byg_A Channel associated prot 99.2 8.6E-11 2.9E-15 79.4 7.4 52 1-55 62-113 (117)
17 1uhp_A Hypothetical protein KI 99.2 1.7E-10 5.7E-15 76.2 8.6 52 1-55 49-100 (107)
18 1i16_A Interleukin 16, LCF; cy 99.2 3.5E-11 1.2E-15 82.6 5.1 53 1-55 65-117 (130)
19 1wf8_A Neurabin-I; PDZ domain, 99.1 1.4E-10 4.9E-15 76.6 7.6 54 1-57 48-101 (107)
20 1ujd_A KIAA0559 protein; PDZ d 99.1 1.1E-10 3.7E-15 78.6 7.1 53 1-56 57-109 (117)
21 1ufx_A KIAA1526 protein; PDZ d 99.1 9.3E-11 3.2E-15 77.7 6.2 56 1-56 40-97 (103)
22 2yt7_A Amyloid beta A4 precurs 99.1 1.2E-10 4.2E-15 76.4 6.6 54 1-55 45-98 (101)
23 1uep_A Membrane associated gua 99.1 2.3E-10 7.7E-15 75.2 7.7 56 1-57 42-97 (103)
24 1v6b_A Harmonin isoform A1; st 99.1 1.6E-10 5.3E-15 78.1 7.1 55 1-55 51-106 (118)
25 1d5g_A Human phosphatase HPTP1 99.1 2.9E-10 1E-14 73.4 8.0 53 1-56 41-93 (96)
26 2fne_A Multiple PDZ domain pro 99.1 2.6E-10 8.8E-15 77.1 8.0 53 1-56 61-113 (117)
27 1wha_A KIAA0147 protein, scrib 99.1 2.1E-10 7.3E-15 75.5 7.4 54 1-57 46-99 (105)
28 1wfg_A Regulating synaptic mem 99.1 2.4E-10 8.4E-15 78.6 7.9 54 1-55 73-126 (131)
29 2qg1_A Multiple PDZ domain pro 99.1 2.5E-10 8.7E-15 73.1 7.4 52 1-55 37-88 (92)
30 2db5_A INAD-like protein; PDZ 99.1 2.7E-10 9.3E-15 77.5 7.9 52 1-55 62-114 (128)
31 4e34_A Golgi-associated PDZ an 99.1 2.2E-10 7.4E-15 72.8 6.9 51 1-54 36-86 (87)
32 1v62_A KIAA1719 protein; struc 99.1 1.8E-10 6E-15 77.7 6.7 54 1-57 50-103 (117)
33 2qkv_A Inactivation-NO-after-p 99.1 1.4E-10 4.8E-15 75.4 5.9 52 1-55 39-90 (96)
34 2awx_A Synapse associated prot 99.1 2.8E-10 9.4E-15 74.9 7.4 53 1-56 41-93 (105)
35 1n7e_A AMPA receptor interacti 99.1 5E-10 1.7E-14 72.6 8.5 54 1-57 38-91 (97)
36 1qav_A Alpha-1 syntrophin (res 99.1 2.7E-10 9.1E-15 72.9 7.1 52 1-55 38-89 (90)
37 2i1n_A Discs, large homolog 3; 99.1 4.8E-10 1.6E-14 73.2 8.5 54 1-57 42-95 (102)
38 3hpk_A Protein interacting wit 99.1 3E-10 1E-14 77.0 7.5 52 1-55 53-104 (125)
39 2jil_A GRIP1 protein, glutamat 99.1 4.3E-10 1.5E-14 72.7 7.7 54 1-57 40-93 (97)
40 2vwr_A Ligand of NUMB protein 99.1 4.4E-10 1.5E-14 72.5 7.8 53 1-56 37-89 (95)
41 2g5m_B Neurabin-2; spinophilin 99.1 3.3E-10 1.1E-14 75.4 7.2 54 1-57 43-96 (113)
42 3axa_A Afadin, nectin-3, prote 99.1 3.5E-10 1.2E-14 74.4 7.2 53 1-56 46-98 (106)
43 2dmz_A INAD-like protein; PDZ 99.1 7E-10 2.4E-14 75.4 8.8 54 1-57 54-107 (129)
44 2jik_A Synaptojanin-2 binding 99.1 5.5E-10 1.9E-14 72.8 7.9 53 1-56 45-97 (101)
45 2o2t_A Multiple PDZ domain pro 99.1 4.4E-10 1.5E-14 75.2 7.5 53 1-56 57-110 (117)
46 2q9v_A Membrane-associated gua 99.1 2.4E-10 8.2E-15 73.0 5.8 54 1-55 35-88 (90)
47 2ehr_A INAD-like protein; PDZ 99.1 4.1E-10 1.4E-14 75.4 6.9 54 1-57 58-111 (117)
48 1nf3_C PAR-6B; semi-CRIB motif 99.1 7.1E-10 2.4E-14 75.7 8.1 53 1-56 73-125 (128)
49 2dm8_A INAD-like protein; PDZ 99.1 1.1E-09 3.7E-14 73.0 8.9 54 1-57 51-104 (116)
50 1ueq_A Membrane associated gua 99.1 1.6E-09 5.4E-14 73.4 9.8 54 1-55 52-105 (123)
51 2opg_A Multiple PDZ domain pro 99.0 9.4E-10 3.2E-14 71.2 8.2 53 1-56 38-90 (98)
52 2fe5_A Presynaptic protein SAP 99.0 6.7E-10 2.3E-14 71.3 7.5 52 1-55 41-92 (94)
53 2kpk_A Membrane-associated gua 99.0 1.4E-09 4.8E-14 74.3 9.5 55 1-56 51-105 (129)
54 1wfv_A Membrane associated gua 99.0 6E-10 2E-14 72.6 7.3 54 1-57 44-97 (103)
55 2ejy_A 55 kDa erythrocyte memb 99.0 2.8E-10 9.4E-15 75.2 5.6 52 1-55 44-95 (97)
56 1q7x_A PDZ2B domain of PTP-BAS 99.0 3.9E-10 1.3E-14 74.5 6.2 54 1-57 50-103 (108)
57 2i04_A Membrane-associated gua 99.0 8.6E-10 2.9E-14 69.6 7.6 53 1-54 33-85 (85)
58 1uju_A Scribble; PDZ domain, c 99.0 1E-10 3.5E-15 77.7 3.4 55 1-58 52-106 (111)
59 3nfk_A Tyrosine-protein phosph 99.0 5.4E-10 1.8E-14 73.5 6.9 54 1-54 51-106 (107)
60 2dkr_A LIN-7 homolog B; LIN-7B 99.0 6.2E-10 2.1E-14 71.3 7.0 52 1-55 38-89 (93)
61 2fcf_A Multiple PDZ domain pro 99.0 8E-10 2.7E-14 72.1 7.6 52 1-55 47-98 (103)
62 2daz_A INAD-like protein; PDZ 99.0 4.8E-10 1.6E-14 76.0 6.6 53 1-56 59-111 (124)
63 2eno_A Synaptojanin-2-binding 99.0 7E-10 2.4E-14 74.7 7.2 53 1-56 55-107 (120)
64 3qe1_A Sorting nexin-27, G pro 99.0 1.2E-09 4.2E-14 71.8 8.0 53 1-57 51-103 (107)
65 2e7k_A Maguk P55 subfamily mem 99.0 8.3E-10 2.8E-14 71.3 6.9 51 1-55 37-87 (91)
66 2edv_A FERM and PDZ domain-con 99.0 1.1E-09 3.7E-14 71.3 7.4 55 1-60 39-93 (96)
67 2kv8_A RGS12, regulator of G-p 99.0 1.1E-09 3.9E-14 68.9 7.2 50 2-55 32-81 (83)
68 2f5y_A Regulator of G-protein 99.0 1.2E-09 4.1E-14 70.1 7.5 52 1-56 32-83 (91)
69 1ihj_A INAD; intermolecular di 99.0 1.3E-09 4.3E-14 70.6 7.5 52 1-55 45-96 (98)
70 2dlu_A INAD-like protein; PDZ 99.0 6.7E-10 2.3E-14 73.6 6.3 53 1-56 46-98 (111)
71 2r4h_A Membrane-associated gua 99.0 1.2E-09 4.1E-14 72.9 7.5 52 1-55 57-108 (112)
72 2iwq_A Multiple PDZ domain pro 99.0 1.1E-09 3.9E-14 74.6 7.5 52 1-55 67-118 (123)
73 1um1_A KIAA1849 protein, RSGI 99.0 9E-10 3.1E-14 72.9 6.6 52 1-55 44-95 (110)
74 2djt_A Unnamed protein product 99.0 1.5E-09 5.1E-14 71.1 7.6 53 1-56 46-98 (104)
75 1z87_A Alpha-1-syntrophin; pro 99.0 1E-09 3.5E-14 84.3 7.8 54 1-57 111-164 (263)
76 3i4w_A Disks large homolog 4; 99.0 1.2E-09 4.2E-14 71.2 7.0 52 1-55 43-94 (104)
77 2jre_A C60-1 PDZ domain peptid 99.0 1.2E-09 4E-14 72.0 7.0 53 1-56 52-104 (108)
78 3soe_A Membrane-associated gua 99.0 1.9E-09 6.4E-14 73.5 8.0 52 7-59 45-96 (113)
79 3l4f_D SH3 and multiple ankyri 99.0 1.1E-09 3.7E-14 75.5 6.8 51 1-55 73-123 (132)
80 2koj_A Partitioning defective 99.0 3.8E-09 1.3E-13 69.8 9.1 56 1-57 47-102 (111)
81 2iwn_A Multiple PDZ domain pro 99.0 2E-09 6.9E-14 69.0 7.4 52 1-55 41-92 (97)
82 2uzc_A Human pdlim5, PDZ and L 99.0 2.4E-09 8.4E-14 67.9 7.4 51 1-55 35-85 (88)
83 1wif_A RSGI RUH-020, riken cDN 99.0 1.1E-09 3.7E-14 75.7 6.1 54 1-55 57-110 (126)
84 2rcz_A Tight junction protein 99.0 2.5E-09 8.7E-14 66.3 7.3 52 1-55 29-80 (81)
85 1uew_A Membrane associated gua 99.0 2E-09 6.8E-14 71.8 7.2 54 1-57 51-104 (114)
86 2vsp_A PDZ domain-containing p 99.0 2E-09 6.9E-14 68.9 6.9 51 1-55 35-85 (91)
87 3r0h_A INAD, inactivation-NO-a 99.0 1.5E-09 5.2E-14 78.2 7.0 52 1-55 144-195 (206)
88 1whd_A RGS3, regulator of G-pr 99.0 3.1E-09 1.1E-13 69.4 7.9 53 1-57 44-96 (100)
89 3r68_A Na(+)/H(+) exchange reg 99.0 2E-09 6.9E-14 69.1 6.9 51 1-55 37-87 (95)
90 3gsl_A Disks large homolog 4; 98.9 1.5E-09 5E-14 77.1 6.6 53 1-56 138-190 (196)
91 2q3g_A PDZ and LIM domain prot 98.9 2.4E-09 8.2E-14 68.2 7.0 50 2-55 36-85 (89)
92 2he4_A Na(+)/H(+) exchange reg 98.9 2.6E-09 9E-14 68.2 7.1 51 1-55 36-86 (90)
93 1va8_A Maguk P55 subfamily mem 98.9 3E-09 1E-13 71.0 7.7 53 1-56 56-108 (113)
94 1x6d_A Interleukin-16; PDZ dom 98.9 1.8E-09 6.3E-14 72.4 6.6 54 1-56 50-103 (119)
95 1y7n_A Amyloid beta A4 precurs 98.9 2.2E-09 7.5E-14 69.6 6.6 50 1-54 39-88 (90)
96 1mfg_A ERB-B2 interacting prot 98.9 2.9E-09 9.8E-14 68.6 7.2 50 1-55 43-92 (95)
97 2cs5_A Tyrosine-protein phosph 98.9 1.1E-09 3.6E-14 73.6 5.3 55 1-55 49-105 (119)
98 1m5z_A GRIP, AMPA receptor int 98.9 3.3E-09 1.1E-13 67.7 7.4 51 1-55 40-90 (91)
99 3cyy_A Tight junction protein 98.9 3.4E-09 1.2E-13 67.5 7.4 52 1-55 31-82 (92)
100 3khf_A Microtubule-associated 98.9 3.8E-09 1.3E-13 68.5 7.7 52 1-56 42-93 (99)
101 1g9o_A NHE-RF; PDZ domain, com 98.9 3.8E-09 1.3E-13 67.4 7.3 51 1-55 35-85 (91)
102 3sfj_A TAX1-binding protein 3; 98.9 3.1E-09 1.1E-13 69.4 7.0 52 1-55 53-104 (104)
103 1n7t_A 99-MER peptide of densi 98.9 3.5E-09 1.2E-13 69.3 7.3 50 1-55 51-100 (103)
104 2ego_A General receptor for ph 98.9 3.9E-09 1.3E-13 68.3 7.3 51 1-55 45-95 (96)
105 2pa1_A PDZ and LIM domain prot 98.9 5.8E-09 2E-13 66.1 7.9 51 1-55 34-84 (87)
106 3ngh_A PDZ domain-containing p 98.9 3.9E-09 1.3E-13 69.2 7.2 51 1-55 34-84 (106)
107 2kom_A Partitioning defective 98.9 4.8E-09 1.6E-13 71.0 7.8 54 1-55 66-119 (121)
108 2v90_A PDZ domain-containing p 98.9 4.3E-09 1.5E-13 67.9 7.2 52 1-56 38-89 (96)
109 2edp_A Fragment, shroom family 98.9 2.7E-09 9.4E-14 69.7 6.3 52 1-56 43-94 (100)
110 2yuy_A RHO GTPase activating p 98.9 2.1E-09 7.2E-14 73.1 5.7 52 1-56 69-120 (126)
111 1wi2_A Riken cDNA 2700099C19; 98.9 6.4E-09 2.2E-13 68.3 7.9 51 1-56 49-99 (104)
112 1vb7_A PDZ and LIM domain 2; P 98.9 7.8E-09 2.7E-13 66.6 8.1 53 1-57 38-90 (94)
113 1q3o_A Shank1; PDZ, GKAP, pept 98.9 5.2E-09 1.8E-13 69.1 7.3 50 2-55 54-103 (109)
114 2gzv_A PRKCA-binding protein; 98.9 5.7E-09 2E-13 70.1 7.4 52 1-55 58-109 (114)
115 2pkt_A PDZ and LIM domain prot 98.9 6.7E-09 2.3E-13 66.4 7.3 52 1-56 35-86 (91)
116 1um7_A Synapse-associated prot 98.9 4.8E-09 1.7E-13 69.3 6.8 51 2-55 48-98 (113)
117 1tp5_A Presynaptic density pro 98.9 5.5E-09 1.9E-13 69.9 7.0 52 1-55 46-97 (119)
118 3r0h_A INAD, inactivation-NO-a 98.9 5.7E-09 1.9E-13 75.2 7.5 54 1-57 53-109 (206)
119 1rgw_A ZAsp protein; PDZ, cyph 98.9 6.1E-09 2.1E-13 65.6 6.8 50 2-55 34-83 (85)
120 2eeg_A PDZ and LIM domain prot 98.9 1E-08 3.5E-13 66.1 7.9 50 2-55 41-90 (94)
121 2dls_A PDZ-rhogef, RHO guanine 98.9 1E-08 3.5E-13 66.0 7.9 51 1-56 37-87 (93)
122 2eei_A PDZ domain-containing p 98.9 8.2E-09 2.8E-13 67.7 7.5 52 1-56 40-91 (106)
123 2d90_A PDZ domain containing p 98.9 1.1E-08 3.7E-13 66.7 7.9 51 2-56 39-89 (102)
124 2csj_A TJP2 protein; PDZ domai 98.9 2.3E-09 8E-14 71.8 4.7 51 1-56 54-104 (117)
125 1v5q_A GRIP1 homolog, glutamat 98.9 6.8E-09 2.3E-13 70.2 7.0 56 1-57 53-108 (122)
126 2w4f_A Protein LAP4; structura 98.8 1.3E-08 4.6E-13 65.4 7.8 52 1-56 42-93 (97)
127 1wf7_A Enigma homologue protei 98.8 8.4E-09 2.9E-13 67.5 6.8 52 1-56 37-88 (103)
128 2edz_A PDZ domain-containing p 98.8 7.6E-09 2.6E-13 69.0 6.7 51 1-55 46-96 (114)
129 1x5q_A LAP4 protein; PDZ domai 98.8 1.5E-08 5.1E-13 66.9 7.7 52 1-56 54-105 (110)
130 3gsl_A Disks large homolog 4; 98.8 1.1E-08 3.7E-13 72.5 7.5 53 1-56 43-95 (196)
131 2qbw_A PDZ-fibronectin fusion 98.8 1.2E-08 3.9E-13 73.1 7.5 50 1-55 32-81 (195)
132 2vsv_A Rhophilin-2; scaffold p 98.8 1.5E-08 5.2E-13 68.0 7.6 52 1-56 52-104 (109)
133 3bpu_A Membrane-associated gua 98.8 1.9E-08 6.3E-13 63.9 7.2 52 1-55 34-85 (88)
134 1ujv_A Membrane associated gua 98.8 2.6E-08 8.8E-13 64.8 7.6 50 7-57 43-92 (96)
135 2eeh_A PDZ domain-containing p 98.8 2.8E-08 9.4E-13 64.7 7.7 51 1-56 44-94 (100)
136 2vz5_A TAX1-binding protein 3; 98.8 1.8E-08 6.1E-13 70.0 6.8 54 1-57 72-125 (139)
137 1v5l_A PDZ and LIM domain 3; a 98.8 1.4E-08 4.9E-13 66.5 6.0 52 1-56 37-88 (103)
138 2jxo_A Ezrin-radixin-moesin-bi 98.8 1.2E-08 4E-13 66.0 5.5 52 1-55 41-92 (98)
139 2z17_A Pleckstrin homology SEC 98.7 1E-08 3.5E-13 67.2 5.0 48 1-52 56-103 (104)
140 1qau_A Neuronal nitric oxide s 98.7 4.3E-08 1.5E-12 64.7 7.9 54 1-56 34-87 (112)
141 3k1r_A Harmonin; protein-prote 98.7 1.7E-08 5.8E-13 73.0 6.4 51 1-56 118-168 (192)
142 3tsv_A Tight junction protein 98.7 2.5E-08 8.4E-13 68.0 6.8 53 1-55 59-111 (124)
143 2lob_A Golgi-associated PDZ an 98.2 1.1E-09 3.9E-14 73.5 0.0 49 2-53 62-110 (112)
144 2h2b_A Tight junction protein 98.7 4.2E-08 1.4E-12 64.3 7.5 51 2-57 48-98 (107)
145 2qt5_A Glutamate receptor-inte 98.7 3.1E-08 1.1E-12 71.3 7.4 52 1-55 143-194 (200)
146 2qt5_A Glutamate receptor-inte 98.7 3.2E-08 1.1E-12 71.2 7.4 53 1-56 41-93 (200)
147 1uit_A Human discs large 5 pro 98.7 2.7E-08 9.1E-13 66.5 5.8 52 1-56 50-101 (117)
148 1b8q_A Protein (neuronal nitri 98.7 4.7E-08 1.6E-12 66.1 6.1 54 1-56 41-94 (127)
149 1p1d_A PDZ45, glutamate recept 98.6 7.7E-08 2.6E-12 69.2 7.2 52 1-55 143-194 (196)
150 1wh1_A KIAA1095 protein; PDZ d 98.6 1.3E-07 4.4E-12 64.0 7.7 53 1-57 56-108 (124)
151 2xkx_A Disks large homolog 4; 98.6 3.9E-08 1.3E-12 83.8 6.3 53 1-56 97-149 (721)
152 2eaq_A LIM domain only protein 98.6 9.1E-08 3.1E-12 60.8 6.4 52 2-55 37-88 (90)
153 3shw_A Tight junction protein 98.6 6.3E-08 2.2E-12 79.6 7.0 53 1-55 31-83 (468)
154 1uf1_A KIAA1526 protein; PDZ d 98.6 1.1E-07 3.8E-12 64.4 7.0 51 1-56 54-104 (128)
155 1vae_A Rhophilin 2, rhophilin, 98.6 7.2E-08 2.5E-12 64.6 5.9 52 2-56 45-96 (111)
156 2kjd_A Sodium/hydrogen exchang 98.6 8.3E-08 2.9E-12 64.7 6.1 52 1-55 41-92 (128)
157 2d8i_A T-cell lymphoma invasio 98.6 7.1E-08 2.4E-12 65.2 5.7 50 1-56 52-101 (114)
158 3suz_A Amyloid beta A4 precurs 98.6 4.8E-08 1.7E-12 77.9 5.4 54 1-55 240-293 (388)
159 1uez_A KIAA1526 protein; PDZ d 98.6 6.2E-08 2.1E-12 63.0 4.9 50 1-55 43-92 (101)
160 2xkx_A Disks large homolog 4; 98.6 9.1E-08 3.1E-12 81.5 7.1 53 1-56 339-391 (721)
161 3tsz_A Tight junction protein 98.6 1E-07 3.4E-12 76.4 6.9 53 1-55 39-91 (391)
162 3qik_A Phosphatidylinositol 3, 98.6 1.3E-07 4.5E-12 63.3 6.3 53 1-54 47-99 (101)
163 1p1d_A PDZ45, glutamate recept 98.6 1.3E-07 4.5E-12 68.0 6.5 56 1-57 44-99 (196)
164 1x5n_A Harmonin; PDZ domain, u 98.6 1.3E-07 4.4E-12 62.7 6.0 49 2-55 50-98 (114)
165 3kzd_A TIAM-1, T-lymphoma inva 98.5 1.8E-07 6.2E-12 61.7 6.3 48 1-54 43-90 (94)
166 2yub_A LIMK-2, LIM domain kina 98.4 5.8E-07 2E-11 60.8 6.4 51 3-57 56-106 (118)
167 1w9e_A Syntenin 1; cell adhesi 98.4 1.2E-06 4.2E-11 61.4 7.4 51 1-54 35-85 (166)
168 2krg_A Na(+)/H(+) exchange reg 98.3 3.9E-07 1.3E-11 67.8 3.8 51 1-55 41-92 (216)
169 3suz_A Amyloid beta A4 precurs 98.3 8.7E-08 3E-12 76.4 0.0 50 1-54 323-372 (388)
170 2kjp_A Uncharacterized protein 98.3 1.2E-06 4.1E-11 56.6 5.4 51 1-56 9-59 (91)
171 2kl1_A YLBL protein; structure 98.2 3.3E-06 1.1E-10 54.5 6.7 50 1-55 13-62 (94)
172 2zpm_A Regulator of sigma E pr 98.2 8.4E-06 2.9E-10 51.6 7.4 49 2-55 13-61 (91)
173 3i18_A LMO2051 protein; alpha- 98.1 1E-05 3.5E-10 52.6 7.0 50 1-55 15-64 (100)
174 3id1_A Regulator of sigma E pr 98.1 1.4E-05 4.7E-10 51.7 7.2 51 2-56 11-61 (95)
175 2i6v_A General secretion pathw 98.1 8.9E-06 3E-10 51.5 5.8 47 5-55 31-77 (87)
176 1fc6_A Photosystem II D1 prote 98.0 9.9E-06 3.4E-10 64.1 7.0 53 1-56 107-159 (388)
177 2pzd_A Serine protease HTRA2; 98.0 1.8E-05 6.3E-10 52.0 7.0 47 2-55 44-90 (113)
178 2l97_A HTRA, putative serine p 98.0 2.8E-05 9.5E-10 53.2 7.7 49 2-55 66-114 (134)
179 2p3w_A Probable serine proteas 97.9 5.1E-05 1.7E-09 49.8 7.0 47 2-55 44-90 (112)
180 1w9e_A Syntenin 1; cell adhesi 97.8 4.5E-05 1.5E-09 53.3 6.7 48 2-53 116-163 (166)
181 2i4s_A General secretion pathw 97.8 6E-05 2E-09 49.3 6.2 47 5-55 49-95 (105)
182 2hga_A Conserved protein MTH13 97.7 0.00011 3.7E-09 50.0 6.8 48 2-55 34-81 (125)
183 4a8c_A Periplasmic PH-dependen 97.7 7.8E-05 2.7E-09 60.0 6.9 49 2-56 372-420 (436)
184 1te0_A Protease DEGS; two doma 97.6 0.00015 5.1E-09 55.8 7.4 52 1-56 252-303 (318)
185 3stj_A Protease DEGQ; serine p 97.6 0.00014 4.6E-09 57.1 6.9 52 1-56 271-322 (345)
186 3rle_A Golgi reassembly-stacki 97.6 0.00013 4.5E-09 53.0 6.2 52 1-56 24-76 (209)
187 3pv2_A DEGQ; trypsin fold, PDZ 97.5 0.00015 5.3E-09 58.7 6.3 48 2-55 395-442 (451)
188 1y8t_A Hypothetical protein RV 97.5 0.00028 9.4E-09 54.2 7.4 49 2-54 251-299 (324)
189 3k50_A Putative S41 protease; 97.5 5.3E-05 1.8E-09 60.9 2.9 50 1-57 98-147 (403)
190 3pv2_A DEGQ; trypsin fold, PDZ 97.4 0.00033 1.1E-08 56.7 7.3 52 1-56 290-341 (451)
191 4a8c_A Periplasmic PH-dependen 97.4 0.00017 6E-09 58.0 5.6 52 1-56 271-322 (436)
192 1lcy_A HTRA2 serine protease; 97.4 0.00038 1.3E-08 53.8 6.8 48 2-56 265-312 (325)
193 4fgm_A Aminopeptidase N family 97.2 0.0003 1E-08 59.1 5.0 51 1-56 504-554 (597)
194 1k32_A Tricorn protease; prote 97.2 0.0005 1.7E-08 59.3 6.1 48 3-55 766-814 (1045)
195 3qo6_A Protease DO-like 1, chl 97.2 0.00061 2.1E-08 53.1 6.0 51 2-56 260-321 (348)
196 3rle_A Golgi reassembly-stacki 97.0 0.00064 2.2E-08 49.4 3.9 49 2-56 121-170 (209)
197 1ky9_A Protease DO, DEGP, HTRA 96.8 0.00019 6.3E-09 58.2 0.0 48 2-55 392-439 (448)
198 3num_A Serine protease HTRA1; 96.8 0.00019 6.5E-09 55.5 0.0 48 2-56 263-310 (332)
199 1ky9_A Protease DO, DEGP, HTRA 96.8 0.0009 3.1E-08 54.1 3.8 51 2-56 295-345 (448)
200 4fln_A Protease DO-like 2, chl 95.0 0.028 9.7E-07 46.8 5.0 53 2-57 286-346 (539)
201 4fln_A Protease DO-like 2, chl 91.3 0.43 1.5E-05 39.7 6.4 45 3-52 425-469 (539)
202 3bbo_O Ribosomal protein L16; 55.9 11 0.00036 25.8 3.3 33 4-41 89-121 (135)
203 3m3h_A OPRT, oprtase, orotate 48.2 23 0.00078 26.0 4.3 33 9-41 131-163 (234)
204 2ftc_I Mitochondrial ribosomal 48.0 13 0.00044 24.8 2.7 32 6-41 78-109 (118)
205 3dez_A OPRT, oprtase, orotate 46.4 25 0.00086 25.9 4.3 33 9-41 143-175 (243)
206 1ffk_F Ribosomal protein L10E; 46.2 15 0.00051 25.8 2.9 42 8-54 111-153 (157)
207 2pa2_A 60S ribosomal protein L 43.9 13 0.00046 25.9 2.3 44 10-56 96-140 (151)
208 1qb7_A APRT, adenine phosphori 38.1 40 0.0014 24.3 4.3 32 10-41 133-164 (236)
209 2wns_A Orotate phosphoribosylt 37.8 26 0.00089 24.7 3.1 33 9-41 105-137 (205)
210 3r8s_M 50S ribosomal protein L 37.8 12 0.00041 25.6 1.2 31 8-43 92-122 (136)
211 1vq8_H 50S ribosomal protein L 36.7 27 0.00092 24.9 3.0 42 10-54 125-167 (171)
212 3mjd_A Orotate phosphoribosylt 35.1 42 0.0015 24.5 4.0 32 10-41 131-162 (232)
213 1vdm_A Purine phosphoribosyltr 34.4 72 0.0025 20.7 4.8 29 13-41 81-109 (153)
214 2dy0_A APRT, adenine phosphori 33.7 52 0.0018 22.6 4.1 30 12-41 123-152 (190)
215 2zkr_h 60S ribosomal protein L 33.2 25 0.00084 26.0 2.4 44 10-56 127-171 (214)
216 1g2q_A Adenine phosphoribosylt 33.1 58 0.002 22.3 4.3 31 11-41 118-148 (187)
217 1zn8_A APRT, adenine phosphori 33.0 58 0.002 22.0 4.2 30 12-41 117-146 (180)
218 1l1q_A Adenine phosphoribosylt 32.5 51 0.0017 22.6 3.9 30 12-41 114-143 (186)
219 3qw4_B UMP synthase; N-termina 31.3 92 0.0032 24.9 5.7 33 9-41 359-391 (453)
220 1o57_A PUR operon repressor; p 30.9 42 0.0014 25.2 3.4 31 11-41 192-222 (291)
221 1y0b_A Xanthine phosphoribosyl 30.3 64 0.0022 22.1 4.1 30 12-41 117-146 (197)
222 2ps1_A Orotate phosphoribosylt 28.7 58 0.002 23.2 3.8 29 13-41 123-151 (226)
223 1vch_A Phosphoribosyltransfera 28.7 62 0.0021 21.6 3.8 28 14-41 119-146 (175)
224 3dor_A Protein CT_858, CPAF; m 28.2 29 0.00099 29.2 2.3 18 11-28 109-126 (583)
225 2yzk_A OPRT, oprtase, orotate 27.7 77 0.0026 21.5 4.1 31 10-41 102-132 (178)
226 1lh0_A OMP synthase; loop clos 26.1 98 0.0034 21.7 4.6 30 11-41 114-143 (213)
227 2zjr_J 50S ribosomal protein L 25.8 11 0.00039 25.9 -0.5 44 4-52 90-134 (142)
228 1vc3_B L-aspartate-alpha-decar 25.0 36 0.0012 22.0 1.8 27 3-34 48-74 (96)
229 2aee_A OPRT, oprtase, orotate 24.2 1E+02 0.0035 21.4 4.4 32 10-41 112-143 (211)
230 2p1z_A Phosphoribosyltransfera 23.8 81 0.0028 21.5 3.6 32 10-41 109-140 (180)
231 2geb_A Hypoxanthine-guanine ph 23.4 87 0.003 21.3 3.7 29 13-41 96-124 (185)
232 1uhe_A Aspartate 1-decarboxyla 23.3 35 0.0012 22.1 1.5 27 3-34 46-72 (97)
233 3vnn_A DNA ligase 4; non-homol 22.6 98 0.0033 20.4 3.8 25 18-42 102-126 (139)
234 3plx_B Aspartate 1-decarboxyla 22.6 36 0.0012 22.2 1.5 28 3-35 47-74 (102)
235 3n2l_A OPRT, oprtase, orotate 22.5 90 0.0031 22.9 3.8 31 10-41 138-168 (238)
236 3ouv_A Serine/threonine protei 22.3 75 0.0026 18.1 2.8 17 25-41 12-28 (71)
237 1yfz_A Hypoxanthine-guanine ph 22.0 94 0.0032 21.5 3.7 29 13-41 116-144 (205)
238 1tc1_A Protein (hypoxanthine p 21.1 99 0.0034 22.0 3.7 28 14-41 102-129 (220)
239 1ufr_A TT1027, PYR mRNA-bindin 20.8 94 0.0032 20.9 3.5 28 14-41 95-122 (181)
240 1pzm_A HGPRT, hypoxanthine-gua 20.5 1.1E+02 0.0036 21.5 3.8 28 14-41 117-144 (211)
241 4a17_H RPL10, 60S ribosomal pr 20.2 29 0.001 25.6 0.7 45 10-57 127-172 (215)
242 2j3t_D Trafficking protein par 20.2 69 0.0024 23.5 2.7 22 7-29 53-74 (219)
No 1
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.38 E-value=1.8e-12 Score=86.40 Aligned_cols=62 Identities=73% Similarity=1.082 Sum_probs=52.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCCCCCCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWDPNPKG 62 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~~~~~~ 62 (114)
+++|+|++.|+|++||+|++|||+++.++++++++++|++..+..+.|.|+|.|+..+.+..
T Consensus 41 ~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~~~~~~ 102 (108)
T 3cbz_A 41 MKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGGGSGNE 102 (108)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC-CCCC
T ss_pred CCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCCCCcce
Confidence 47899999999999999999999999999999999999986222457999999987766543
No 2
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.35 E-value=2e-12 Score=83.67 Aligned_cols=50 Identities=14% Similarity=0.264 Sum_probs=46.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 54 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r 54 (114)
+++|+|++.| |++||+|++|||+++.+++|++++++||++ ++.|+|+|..
T Consensus 31 ~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~---g~~V~L~v~p 80 (82)
T 1r6j_A 31 VKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTS---GTVVTITIMP 80 (82)
T ss_dssp CTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHS---CSEEEEEEEE
T ss_pred cCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcC---CCEEEEEEEe
Confidence 5899999998 899999999999999999999999999976 7899999975
No 3
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.33 E-value=4.7e-12 Score=84.30 Aligned_cols=54 Identities=20% Similarity=0.246 Sum_probs=48.6
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++||+|+++|.|++||.|++|||+++.+++|+|++++||++. .+..++|.+.+.
T Consensus 36 ~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~-~g~~~~L~lv~p 89 (95)
T 3gge_A 36 KDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELK-KEELFTMKLIEP 89 (95)
T ss_dssp CTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSC-TTCEEEEEEEEE
T ss_pred cCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCC-CCCEEEEEEECc
Confidence 579999999999999999999999999999999999999972 345788888875
No 4
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.26 E-value=1.3e-11 Score=79.46 Aligned_cols=52 Identities=33% Similarity=0.546 Sum_probs=48.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++|+|++.|+|++||+|++|||.++.++++++++++|++. ++.|.|++.+.
T Consensus 29 ~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~---~~~v~L~v~~~ 80 (88)
T 3e17_A 29 TRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKS---RGKLQLVVLRD 80 (88)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHT---TTEEEEEECCC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEeCC
Confidence 47899999999999999999999999999999999999997 78999999875
No 5
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.21 E-value=2.3e-11 Score=82.73 Aligned_cols=52 Identities=33% Similarity=0.616 Sum_probs=48.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||+++.++++++++.+|++. +..|.|+|.|.
T Consensus 61 ~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~---~~~v~L~v~R~ 112 (118)
T 3b76_A 61 EPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT---SSSIVLKALEV 112 (118)
T ss_dssp CTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC---CSEEEEEEEEE
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEEC
Confidence 47899999999999999999999999999999999999987 78899999986
No 6
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.19 E-value=3.7e-11 Score=82.29 Aligned_cols=57 Identities=33% Similarity=0.481 Sum_probs=50.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc----CCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV----QKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~----~~~~~V~L~V~r~~~ 57 (114)
+++|+|++.|+|++||+|++|||+++.+++|++++++|+.+. +.+..|+|+|.|...
T Consensus 63 ~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 63 IHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp CSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 579999999999999999999999999999999999999641 125799999999754
No 7
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=4.8e-11 Score=76.77 Aligned_cols=52 Identities=29% Similarity=0.553 Sum_probs=47.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++|+|+++++|++||+|++|||.++.++++++++++|++. .+.|.|+|.|.
T Consensus 33 ~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~r~ 84 (88)
T 1kwa_A 33 MHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREM---RGSITFKIVPS 84 (88)
T ss_dssp CTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHC---CEEEEEEEECC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC---CCcEEEEEECC
Confidence 47899999899999999999999999999999999999997 45899999875
No 8
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.18 E-value=6.1e-11 Score=80.55 Aligned_cols=54 Identities=26% Similarity=0.412 Sum_probs=49.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+|+.. ++.|+|+|.|...
T Consensus 61 ~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~---~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 61 HPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNA---SGSIEMQVVAGGD 114 (120)
T ss_dssp CTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHC---CSEEEEEEECCTT
T ss_pred CCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECCc
Confidence 47899999999999999999999999999999999999997 7789999998643
No 9
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.18 E-value=8.7e-11 Score=78.31 Aligned_cols=52 Identities=17% Similarity=0.387 Sum_probs=48.6
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++|+|++.|+|++||+|++|||.++.+++++++..++++. ++.|.|+|.|.
T Consensus 33 ~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~ 84 (106)
T 2la8_A 33 IQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA---NGKVSMEVTRP 84 (106)
T ss_dssp CTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSC---BSCEEEEEEEC
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC---CCeEEEEEEeC
Confidence 47899999999999999999999999999999999999987 67899999986
No 10
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.18 E-value=4.9e-11 Score=86.00 Aligned_cols=51 Identities=27% Similarity=0.591 Sum_probs=48.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 54 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r 54 (114)
++||+|++.|+|++||+|++|||+++.++++++++.+|+++ +..|+|+|.|
T Consensus 119 ~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~---g~~v~L~V~R 169 (170)
T 3egg_C 119 TEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT---KGRVRFMIGR 169 (170)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHC---CSEEEEEEEE
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEe
Confidence 47899999999999999999999999999999999999997 7899999987
No 11
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.18 E-value=6.3e-11 Score=76.38 Aligned_cols=52 Identities=31% Similarity=0.521 Sum_probs=48.6
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++|+|++.|+|++||+|++|||.++.++++++++++|++. ++.+.|+|.+.
T Consensus 36 ~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~~~ 87 (93)
T 3o46_A 36 MRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQS---QGAITFKIIPG 87 (93)
T ss_dssp CTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHC---CEEEEEEEECC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEeC
Confidence 47899999999999999999999999999999999999987 67999999975
No 12
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.17 E-value=6.4e-11 Score=78.10 Aligned_cols=54 Identities=30% Similarity=0.399 Sum_probs=49.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.++|++||+|++|||.++.++++++++.+|++. ++.|+|+|.+...
T Consensus 43 ~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 43 HPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ---RGEIEFEVVYVAL 96 (103)
T ss_dssp CTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHC---CSEEEEEEEECC-
T ss_pred CCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCcEEEEEEecCC
Confidence 47899999888999999999999999999999999999987 6799999998743
No 13
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.17 E-value=5.8e-11 Score=78.82 Aligned_cols=54 Identities=31% Similarity=0.517 Sum_probs=49.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
+++|+|++.|+|++||+|++|||.++.++++++++++|+.. ..+.|.|+|.|..
T Consensus 52 ~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~--~~~~v~l~v~R~~ 105 (108)
T 2d92_A 52 VADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV--PPGLVHLGICSGP 105 (108)
T ss_dssp CTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS--CSEEEEEEEECCC
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCCeEEEEEEcCC
Confidence 47899999999999999999999999999999999999986 2468999999863
No 14
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.16 E-value=7e-11 Score=78.93 Aligned_cols=56 Identities=23% Similarity=0.456 Sum_probs=49.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC-CCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ-KPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~-~~~~V~L~V~r~~ 56 (114)
+++|+|++.|+|++||+|++|||+++.+++|++++++|+++.. .+..+.|.+.|..
T Consensus 49 ~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 49 IPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSG 105 (109)
T ss_dssp CTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCC
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCC
Confidence 4789999999999999999999999999999999999999721 1457899998863
No 15
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.16 E-value=8.8e-11 Score=77.90 Aligned_cols=53 Identities=36% Similarity=0.588 Sum_probs=49.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
+++|+|++.|+|++||+|++|||.++.++++++++.+|++. ++.|.|+|.|..
T Consensus 40 ~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~~ 92 (106)
T 4amh_A 40 IEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNT---SDFVYLKVAKPG 92 (106)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSC---CSEEEEEEECCS
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC---CCeEEEEEEeCC
Confidence 47899999999999999999999999999999999999987 779999999974
No 16
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=8.6e-11 Score=79.41 Aligned_cols=52 Identities=37% Similarity=0.630 Sum_probs=48.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+|++. +..|+|+|.|.
T Consensus 62 ~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~ 113 (117)
T 2byg_A 62 IDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT---SEVVYLKVGKP 113 (117)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSEEEEEEEEE
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeC
Confidence 47899999999999999999999999999999999999986 78999999986
No 17
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.7e-10 Score=76.25 Aligned_cols=52 Identities=25% Similarity=0.454 Sum_probs=48.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++.+|+.. +..|.|+|.|.
T Consensus 49 ~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~ 100 (107)
T 1uhp_A 49 VDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTA---KEPIVVQVLRR 100 (107)
T ss_dssp CSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHHC---CSSEEEEEEEC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCcEEEEEEeC
Confidence 47899999988999999999999999999999999999987 78999999986
No 18
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.15 E-value=3.5e-11 Score=82.59 Aligned_cols=53 Identities=26% Similarity=0.552 Sum_probs=48.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++|+|++.|+|++||+|++|||+++.+++|++++++|+.. ....|.|+|.|.
T Consensus 65 ~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~--~~~~v~l~v~r~ 117 (130)
T 1i16_A 65 FKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL--PDGPVTIVIRRK 117 (130)
T ss_dssp CSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS--CSSEEEEEEEEE
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCceEEEEEEeC
Confidence 47899999999999999999999999999999999999987 244699999886
No 19
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=1.4e-10 Score=76.58 Aligned_cols=54 Identities=31% Similarity=0.552 Sum_probs=49.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++.+++.. +..|.|+|.|...
T Consensus 48 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 48 TEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT---KGNVRFVIGREKP 101 (107)
T ss_dssp CTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC---CSEEEEEEEEECC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC---CCeEEEEEEeCCC
Confidence 47899999999999999999999999999999999999987 7899999998744
No 20
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=1.1e-10 Score=78.61 Aligned_cols=53 Identities=19% Similarity=0.372 Sum_probs=49.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
+++|+|++.|+|++||+|++|||.++.++++++++.+|+.. +..|.|+|.|..
T Consensus 57 ~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~~ 109 (117)
T 1ujd_A 57 LPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQ---SGEAEICVRLDL 109 (117)
T ss_dssp CTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCC---SSCEEEEEESSC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC---CCEEEEEEEECC
Confidence 47899999999999999999999999999999999999986 788999999863
No 21
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=9.3e-11 Score=77.70 Aligned_cols=56 Identities=25% Similarity=0.465 Sum_probs=49.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC--CCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ--KPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~--~~~~V~L~V~r~~ 56 (114)
+++|+|++.|+|++||+|++|||+++.+++|++++++|+.+.+ .+..+.|+|.|..
T Consensus 40 ~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 40 QRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFN 97 (103)
T ss_dssp CTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCC
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEcc
Confidence 4789999999999999999999999999999999999998521 1568999998863
No 22
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.12 E-value=1.2e-10 Score=76.38 Aligned_cols=54 Identities=19% Similarity=0.440 Sum_probs=48.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++|+|++.|+|++||+|++|||.++.+.++++++++|++. +.+..|+|+|.|+
T Consensus 45 ~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~-~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 45 LHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET-KSQTSVTLSIVHC 98 (101)
T ss_dssp CTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT-TTSSEEEEEECCC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCCeEEEEEEeC
Confidence 47899999999999999999999999999999999999984 1267899999987
No 23
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=2.3e-10 Score=75.23 Aligned_cols=56 Identities=21% Similarity=0.426 Sum_probs=49.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||.++.++++++++++|+... .+..|.|+|.|...
T Consensus 42 ~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~-~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 42 IAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAA-RNGQVNLTVRRKVL 97 (103)
T ss_dssp CTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH-HHTEEEEEEEEECC
T ss_pred CCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CCCcEEEEEEeCCC
Confidence 378999999999999999999999999999999999999751 14789999999754
No 24
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=1.6e-10 Score=78.13 Aligned_cols=55 Identities=31% Similarity=0.411 Sum_probs=48.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC-CCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ-KPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~-~~~~V~L~V~r~ 55 (114)
+++|+|++.|+|++||+|++|||+++.+++|++++++|++... .+..|+|+|.|+
T Consensus 51 ~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 51 YEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp CTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 4789999999999999999999999999999999999987521 256899999996
No 25
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.12 E-value=2.9e-10 Score=73.35 Aligned_cols=53 Identities=34% Similarity=0.547 Sum_probs=48.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+|+.. +..|.|+|.|..
T Consensus 41 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~~ 93 (96)
T 1d5g_A 41 IPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT---GQVVHLLLEKGQ 93 (96)
T ss_dssp CTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSC---CSEEEEEEECCS
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEcCC
Confidence 37899999988999999999999999999999999999986 788999998863
No 26
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=2.6e-10 Score=77.13 Aligned_cols=53 Identities=34% Similarity=0.591 Sum_probs=48.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+|++. ++.|.|+|.|..
T Consensus 61 ~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~g 113 (117)
T 2fne_A 61 FAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT---KGTVTLMVLSSD 113 (117)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC---CSSEEEEEEECS
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCC
Confidence 47899999999999999999999999999999999999987 678999999863
No 27
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=2.1e-10 Score=75.47 Aligned_cols=54 Identities=26% Similarity=0.465 Sum_probs=49.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+|+.. +..|.|+|.|...
T Consensus 46 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~~~ 99 (105)
T 1wha_A 46 AEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA---SPTIALLLEREAG 99 (105)
T ss_dssp CTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC---CSCEEEEEEECCC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECCC
Confidence 37899999999999999999999999999999999999986 7789999999754
No 28
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.11 E-value=2.4e-10 Score=78.62 Aligned_cols=54 Identities=24% Similarity=0.412 Sum_probs=48.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||+++.++++++++++|+.+ +.+..|.|+|.|.
T Consensus 73 ~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~-~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 73 KKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILES-KPEPQVELVVSRS 126 (131)
T ss_dssp CTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHT-SSSSEEEEEEEEE
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc-CCCCEEEEEEEcC
Confidence 47899999999999999999999999999999999999986 1247899999986
No 29
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.11 E-value=2.5e-10 Score=73.13 Aligned_cols=52 Identities=33% Similarity=0.541 Sum_probs=48.3
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||.|++|||.++.+++++++..+++.. +..+.|+|.|.
T Consensus 37 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~ 88 (92)
T 2qg1_A 37 VKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCS---LGTVTLEVGRI 88 (92)
T ss_dssp CTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC---CSEEEEEEECC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEcc
Confidence 37899999999999999999999999999999999999986 77899999986
No 30
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.11 E-value=2.7e-10 Score=77.50 Aligned_cols=52 Identities=29% Similarity=0.570 Sum_probs=48.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFE-NMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~-~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||+++. ++++++++.+|+.. +..|.|+|.|.
T Consensus 62 ~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~---~~~v~l~v~r~ 114 (128)
T 2db5_A 62 QPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQT---TGSLRLIVARE 114 (128)
T ss_dssp CTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHC---CSEEEEEEEEC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC---CCeEEEEEEcC
Confidence 478999999999999999999999997 99999999999986 78999999987
No 31
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.11 E-value=2.2e-10 Score=72.76 Aligned_cols=51 Identities=31% Similarity=0.472 Sum_probs=46.3
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 54 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r 54 (114)
.|+|+|+++++|++||+|++|||.++.++++++++.+|++. +..+.|+|..
T Consensus 36 ~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~~ 86 (87)
T 4e34_A 36 HPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ---RGEIEFEVVY 86 (87)
T ss_dssp CTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHC---CSEEEEEEEE
T ss_pred CCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEE
Confidence 47899999888999999999999999999999999999986 6789998864
No 32
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=1.8e-10 Score=77.66 Aligned_cols=54 Identities=24% Similarity=0.391 Sum_probs=49.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||.++.++++++++++|++. +..|.|+|.|...
T Consensus 50 ~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~~~ 103 (117)
T 1v62_A 50 KPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASI---SEKVRLEILPVPQ 103 (117)
T ss_dssp CTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSC---SSEEEEEECCBTT
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEECCC
Confidence 47899999999999999999999999999999999999975 7899999998743
No 33
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.10 E-value=1.4e-10 Score=75.44 Aligned_cols=52 Identities=17% Similarity=0.391 Sum_probs=48.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++|+|++.|+|++||.|++|||.++.+++++++..+++.. ++.|.|+|.|.
T Consensus 39 ~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~ 90 (96)
T 2qkv_A 39 IQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGA---NGKVSMEVTRP 90 (96)
T ss_dssp CTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC---SSEEEEEEECC
T ss_pred CCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC---CCcEEEEEEeC
Confidence 47899999999999999999999999999999999999987 67899999985
No 34
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.10 E-value=2.8e-10 Score=74.94 Aligned_cols=53 Identities=36% Similarity=0.588 Sum_probs=49.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++..++.. +..|.|+|.|..
T Consensus 41 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~~ 93 (105)
T 2awx_A 41 IEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT---SDFVYLKVAKPT 93 (105)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC---CSEEEEEEECCC
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEcCC
Confidence 47899999999999999999999999999999999999986 689999999874
No 35
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.10 E-value=5e-10 Score=72.59 Aligned_cols=54 Identities=30% Similarity=0.417 Sum_probs=48.6
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++++|++.|+|++||+|++|||.++.+++++++.++|+.. +..|.|+|.|...
T Consensus 38 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 38 TKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMA---GETVTLKIKKQTD 91 (97)
T ss_dssp CTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSEEEEEEECCCC
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCCC
Confidence 47899999988999999999999999999999999999964 7789999998644
No 36
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.10 E-value=2.7e-10 Score=72.86 Aligned_cols=52 Identities=31% Similarity=0.372 Sum_probs=47.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++..++.. +..+.|+|.|.
T Consensus 38 ~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~---~~~v~l~v~r~ 89 (90)
T 1qav_A 38 FKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT---GKEVVLEVKYM 89 (90)
T ss_dssp CTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC---CSEEEEEEEEC
T ss_pred CCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEEe
Confidence 37899999988999999999999999999999999999986 67899999875
No 37
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.10 E-value=4.8e-10 Score=73.19 Aligned_cols=54 Identities=33% Similarity=0.591 Sum_probs=49.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++..++.. +..+.|+|.|...
T Consensus 42 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~~~ 95 (102)
T 2i1n_A 42 IPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEA---GPVVRLVVRRRQP 95 (102)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS---CSEEEEEEEEECC
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCCC
Confidence 37899999999999999999999999999999999999986 7899999999744
No 38
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.09 E-value=3e-10 Score=77.03 Aligned_cols=52 Identities=27% Similarity=0.445 Sum_probs=48.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++|+|++.|+|++||+|++|||.++.++++++++.+|++. ++.|+|+|.|.
T Consensus 53 ~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~r~ 104 (125)
T 3hpk_A 53 FDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV---KGEVTIHYNKL 104 (125)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHS---CSEEEEEEEEE
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEEC
Confidence 47899999999999999999999999999999999999987 67799999985
No 39
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.08 E-value=4.3e-10 Score=72.70 Aligned_cols=54 Identities=26% Similarity=0.463 Sum_probs=49.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||.|++|||.++.+++++++.++|+.. +..+.|+|.|...
T Consensus 40 ~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~~~ 93 (97)
T 2jil_A 40 RPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC---GQEAALLIEYDVS 93 (97)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS---CSEEEEEEEEECC
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCCC
Confidence 37899999999999999999999999999999999999985 7899999998743
No 40
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.08 E-value=4.4e-10 Score=72.48 Aligned_cols=53 Identities=23% Similarity=0.432 Sum_probs=49.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++..++.. +..+.|+|.|..
T Consensus 37 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~~ 89 (95)
T 2vwr_A 37 LEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQAS---GERVNLTIARPG 89 (95)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC---CSEEEEEEEEES
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEcCC
Confidence 37899999999999999999999999999999999999986 789999999863
No 41
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.08 E-value=3.3e-10 Score=75.36 Aligned_cols=54 Identities=26% Similarity=0.526 Sum_probs=49.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.|+|+|++.|+|++||+|++|||.++.++++.+++.+++.. +..|.|+|.|...
T Consensus 43 ~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~~~ 96 (113)
T 2g5m_B 43 TEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT---KGRVRFMIGRERP 96 (113)
T ss_dssp CTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS---CSSCEEEEEECCC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC---CCeEEEEEEeCCC
Confidence 47899999999999999999999999999999999999987 7899999998743
No 42
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.08 E-value=3.5e-10 Score=74.41 Aligned_cols=53 Identities=32% Similarity=0.545 Sum_probs=48.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+++.. +..|.|+|.|..
T Consensus 46 ~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~~ 98 (106)
T 3axa_A 46 VKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRT---SSVVTLEVAKQG 98 (106)
T ss_dssp BTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSEEEEEEECCC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCC
Confidence 37899999999999999999999999999999999999986 789999999863
No 43
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.07 E-value=7e-10 Score=75.42 Aligned_cols=54 Identities=26% Similarity=0.460 Sum_probs=49.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||.++.++++++++++|+.. +..|.|+|.|...
T Consensus 54 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 54 IPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNA---GQVVHLTLVRRKT 107 (129)
T ss_dssp CTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHC---CSSEEEEEEEESS
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCCc
Confidence 37899999999999999999999999999999999999985 7899999998754
No 44
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.07 E-value=5.5e-10 Score=72.78 Aligned_cols=53 Identities=36% Similarity=0.565 Sum_probs=48.3
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+++.. +..|.|+|.|..
T Consensus 45 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~~ 97 (101)
T 2jik_A 45 KENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA---GYAVSLRVQHRL 97 (101)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC---CSEEEEEEEEES
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEeCC
Confidence 37899999999999999999999999999999999999986 678999999863
No 45
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.07 E-value=4.4e-10 Score=75.17 Aligned_cols=53 Identities=25% Similarity=0.515 Sum_probs=48.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECC-CCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFE-NMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~-~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||.++. ++++++++.+|+.. +..|.|+|.|..
T Consensus 57 ~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~---~~~v~l~v~R~~ 110 (117)
T 2o2t_A 57 QEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA---KDTVQLVIARGS 110 (117)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC---CSEEEEEEESSC
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC---CCEEEEEEEeCC
Confidence 378999999999999999999999998 99999999999986 789999999863
No 46
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.06 E-value=2.4e-10 Score=72.97 Aligned_cols=54 Identities=26% Similarity=0.458 Sum_probs=47.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||.|++|||.++.++++++++.+|++.. .++.|.|+|.|.
T Consensus 35 ~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~~~v~l~v~R~ 88 (90)
T 2q9v_A 35 VPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAA-KQGHVNLTVRQT 88 (90)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH-HHTEEEEEEEEC
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CCCeEEEEEEec
Confidence 378999999999999999999999999999999999999861 123899999875
No 47
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.05 E-value=4.1e-10 Score=75.39 Aligned_cols=54 Identities=22% Similarity=0.467 Sum_probs=49.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+|+.. +..+.|+|.|...
T Consensus 58 ~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 58 LEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNA---GNPVVFIVQSLSS 111 (117)
T ss_dssp CSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHTS---CSSEEEEECCBSC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECCC
Confidence 37899999999999999999999999999999999999986 7899999998743
No 48
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.05 E-value=7.1e-10 Score=75.73 Aligned_cols=53 Identities=21% Similarity=0.290 Sum_probs=48.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|.|++||+|++|||.++.++++++++.+|+.. +..|.|+|.|..
T Consensus 73 ~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~r~~ 125 (128)
T 1nf3_C 73 VPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIAN---SRNLIITVRPAN 125 (128)
T ss_dssp CTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHT---TTSEEEEEECCC
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECC
Confidence 47899999999999999999999999999999999999976 678999999863
No 49
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.05 E-value=1.1e-09 Score=73.02 Aligned_cols=54 Identities=41% Similarity=0.633 Sum_probs=48.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||+++.++++++++.+|+.. +..|.|+|.|...
T Consensus 51 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~~~ 104 (116)
T 2dm8_A 51 YEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT---PQKVRLVVYRDEA 104 (116)
T ss_dssp CSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC---CSEEEEEEECCSS
T ss_pred CCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEeCCc
Confidence 37899999999999999999999999999999999999987 6889999998644
No 50
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=1.6e-09 Score=73.40 Aligned_cols=54 Identities=24% Similarity=0.521 Sum_probs=48.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||+++.++++++++++|++. +.+..|.|+|.|.
T Consensus 52 ~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~g~~v~l~v~R~ 105 (123)
T 1ueq_A 52 IPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSV-PIGQSVNLVLCRG 105 (123)
T ss_dssp CTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTS-CTTCEEEEEEEES
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCCeEEEEEEeC
Confidence 37899999999999999999999999999999999999985 1157899999986
No 51
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.05 E-value=9.4e-10 Score=71.19 Aligned_cols=53 Identities=38% Similarity=0.626 Sum_probs=48.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+++.. +..|.|+|.|..
T Consensus 38 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~~ 90 (98)
T 2opg_A 38 YEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQT---PQRVRLTLYRDE 90 (98)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSEEEEEEEECS
T ss_pred CCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEcCC
Confidence 37899999999999999999999999999999999999987 688999999863
No 52
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.05 E-value=6.7e-10 Score=71.28 Aligned_cols=52 Identities=38% Similarity=0.627 Sum_probs=47.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||.|++|||.++.++++.+++.+++.. +..|.|+|.|.
T Consensus 41 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~ 92 (94)
T 2fe5_A 41 IEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNT---SDMVYLKVAKP 92 (94)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTC---CSEEEEEEECC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEcC
Confidence 37899999999999999999999999999999999999986 56899999875
No 53
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.05 E-value=1.4e-09 Score=74.32 Aligned_cols=55 Identities=25% Similarity=0.524 Sum_probs=48.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||+++.++++++++++|++.. .+..|.|+|.|..
T Consensus 51 ~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~-~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 51 VLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP-IGASVDLELCRGY 105 (129)
T ss_dssp CTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSC-TTEEEEEEEEECS
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CCCeEEEEEEeCC
Confidence 478999999999999999999999999999999999999861 2457999999863
No 54
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=6e-10 Score=72.61 Aligned_cols=54 Identities=19% Similarity=0.418 Sum_probs=48.6
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++.+++.. +..|.|+|.|...
T Consensus 44 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 44 AEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSG---GRRVRLLLKRGTG 97 (103)
T ss_dssp CTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHH---CSEECEEEECTTC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECCC
Confidence 37899999988999999999999999999999999999966 7889999998643
No 55
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.04 E-value=2.8e-10 Score=75.21 Aligned_cols=52 Identities=33% Similarity=0.528 Sum_probs=47.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+|+|+|++.|+|++||.|++|||.++.+++++++.++|++. ++.|.|+|.+.
T Consensus 44 ~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~---~~~v~L~V~~~ 95 (97)
T 2ejy_A 44 LHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET---KGMISLKVIPN 95 (97)
T ss_dssp CSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC---CEEEEEEEECC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEEC
Confidence 47899999999999999999999999999999999999986 67899999864
No 56
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=3.9e-10 Score=74.46 Aligned_cols=54 Identities=33% Similarity=0.540 Sum_probs=49.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++.+++.. +..|.|+|.|...
T Consensus 50 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 50 IPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT---GQVVHLLLEKGQS 103 (108)
T ss_dssp CTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHT---TSEEEEEEECCCC
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCCc
Confidence 37899999999999999999999999999999999999987 7899999998643
No 57
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.04 E-value=8.6e-10 Score=69.65 Aligned_cols=53 Identities=26% Similarity=0.541 Sum_probs=46.3
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 54 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r 54 (114)
.++|+|++.|+|++||.|++|||.++.+++++++.++|+.. +.+..+.|+|.|
T Consensus 33 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~g~~v~l~v~R 85 (85)
T 2i04_A 33 VLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSI-PIGASVDLELCR 85 (85)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTS-CTTCEEEEEEEC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCCeEEEEEEC
Confidence 37899999999999999999999999999999999999976 124678998865
No 58
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=1e-10 Score=77.73 Aligned_cols=55 Identities=29% Similarity=0.502 Sum_probs=50.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWDP 58 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~~ 58 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+|+.. +..|.|+|.|...+
T Consensus 52 ~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~~~~ 106 (111)
T 1uju_A 52 SPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSV---GDTLTVLVCDGFES 106 (111)
T ss_dssp CTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSSC---SSEEEECCCCCCCC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECCCC
Confidence 37899999999999999999999999999999999999986 78999999987554
No 59
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.04 E-value=5.4e-10 Score=73.52 Aligned_cols=54 Identities=20% Similarity=0.396 Sum_probs=46.4
Q ss_pred CCCchhhhcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhccC-CCCcEEEEEEe
Q psy1030 1 MKGGAVALDG-RIEPGDMILQVNDINFENMSNDEAVRVLREVVQ-KPGPIKLVVAK 54 (114)
Q Consensus 1 i~gG~Aa~~G-rL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~-~~~~V~L~V~r 54 (114)
.++|+|++.| +|++||+|++|||.++.++++++++.+|+.... .++.|.|+|.|
T Consensus 51 ~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 51 APGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp CTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEEC
T ss_pred CCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEc
Confidence 4789999999 699999999999999999999999999998710 01489999986
No 60
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=6.2e-10 Score=71.30 Aligned_cols=52 Identities=33% Similarity=0.604 Sum_probs=47.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++++|++.|+|++||.|++|||.++.++++++++.+++.. +..+.|+|.|.
T Consensus 38 ~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~r~ 89 (93)
T 2dkr_A 38 IPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAA---QGSVKLVVRSG 89 (93)
T ss_dssp CTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHC---CSEEEEEECCC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCcEEEEEEeC
Confidence 37889999988999999999999999999999999999987 67899999886
No 61
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=8e-10 Score=72.12 Aligned_cols=52 Identities=23% Similarity=0.587 Sum_probs=48.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||.|++|||.++.+++++++.++|++. ++.+.|+|.|.
T Consensus 47 ~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~r~ 98 (103)
T 2fcf_A 47 LEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKA---GNPVVFMVQSI 98 (103)
T ss_dssp CSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSSEEEEEECC
T ss_pred CCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCcEEEEEEEC
Confidence 37899999999999999999999999999999999999987 56999999986
No 62
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.03 E-value=4.8e-10 Score=76.00 Aligned_cols=53 Identities=28% Similarity=0.458 Sum_probs=49.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++.+|++. +..|.|+|.|..
T Consensus 59 ~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~~ 111 (124)
T 2daz_A 59 NPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTA---PSKVKLVFIRNE 111 (124)
T ss_dssp CTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHS---CSEEEEEEEECT
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCC
Confidence 47899999999999999999999999999999999999987 679999999863
No 63
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=7e-10 Score=74.69 Aligned_cols=53 Identities=36% Similarity=0.565 Sum_probs=48.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||+++.++++++++.+++.. +..|.|+|.|..
T Consensus 55 ~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~~ 107 (120)
T 2eno_A 55 KENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA---GYAVSLRVQHRL 107 (120)
T ss_dssp CSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH---CSEEEEEEEEEE
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCC
Confidence 37899999999999999999999999999999999999987 678999999873
No 64
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.02 E-value=1.2e-09 Score=71.77 Aligned_cols=53 Identities=30% Similarity=0.483 Sum_probs=48.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.| |++||+|++|||.++.++++++++.+|+.. +..+.|+|.|...
T Consensus 51 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 51 LPGGAADRAG-VRKGDRILEVNGVNVEGATHKQVVDLIRAG---EKELILTVLSVES 103 (107)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHC---SSEEEEEEECSSC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEcCCC
Confidence 3688999988 999999999999999999999999999976 7899999998743
No 65
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=8.3e-10 Score=71.30 Aligned_cols=51 Identities=27% Similarity=0.439 Sum_probs=47.3
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++|+|++.|+|++||.|++|||.++ +.+++++.++|++. ++.|.|+|.+.
T Consensus 37 ~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~---~~~v~l~v~~~ 87 (91)
T 2e7k_A 37 LHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNA---SGSVILKILSG 87 (91)
T ss_dssp CSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTC---CSSBCEEEECC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcC---CCeEEEEEEEC
Confidence 47899999999999999999999999 99999999999986 67899999976
No 66
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=1.1e-09 Score=71.30 Aligned_cols=55 Identities=36% Similarity=0.674 Sum_probs=47.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCCCCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWDPNP 60 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~~~~ 60 (114)
.++|+|+ ++|++||+|++|||.++.++++.+++.+++.. +..|.|+|.|...+.|
T Consensus 39 ~~~spA~--agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~~~~~p 93 (96)
T 2edv_A 39 TAGGSAH--GKLFPGDQILQMNNEPAEDLSWERAVDILREA---EDSLSITVVRCTSSGP 93 (96)
T ss_dssp CSSSSST--TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHC---SSCEEEEEEECCCCSS
T ss_pred CCCCchh--hCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECCCCCC
Confidence 3678883 89999999999999999999999999999986 7899999999754333
No 67
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.01 E-value=1.1e-09 Score=68.91 Aligned_cols=50 Identities=30% Similarity=0.637 Sum_probs=45.2
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++.| |++||.|++|||.++.++++++++++|+.. +..+.|+|.|.
T Consensus 32 ~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~ 81 (83)
T 2kv8_A 32 RGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKC---SGVLHMVIAEG 81 (83)
T ss_dssp TTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC---SSCEEEEEECC
T ss_pred CCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEcC
Confidence 678888877 999999999999999999999999999876 57799999885
No 68
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=1.2e-09 Score=70.11 Aligned_cols=52 Identities=27% Similarity=0.360 Sum_probs=46.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.| |++||.|++|||.++.+++++++..+|+.. +..+.|+|.|..
T Consensus 32 ~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~~ 83 (91)
T 2f5y_A 32 DSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC---PSEIILLVWRMV 83 (91)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC---SSEEEEEEEECC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCC
Confidence 3788899887 999999999999999999999999999986 678999999863
No 69
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.01 E-value=1.3e-09 Score=70.56 Aligned_cols=52 Identities=23% Similarity=0.399 Sum_probs=48.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||.|++|||.++.++++.++..+|+.. +..+.|+|.|.
T Consensus 45 ~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~ 96 (98)
T 1ihj_A 45 VPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEA---DFKIELEIQTF 96 (98)
T ss_dssp CTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHS---CSEEEEEEEEC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC---CCeEEEEEEeC
Confidence 37899999998999999999999999999999999999985 78999999985
No 70
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.00 E-value=6.7e-10 Score=73.63 Aligned_cols=53 Identities=30% Similarity=0.601 Sum_probs=48.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||+++.++++++++++|+.. +..|.|+|.|..
T Consensus 46 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~~ 98 (111)
T 2dlu_A 46 VPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC---GNSVRMLVARDP 98 (111)
T ss_dssp CTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH---CSEEEEEEEESC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEeCC
Confidence 37899999999999999999999999999999999999986 788999999863
No 71
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.00 E-value=1.2e-09 Score=72.90 Aligned_cols=52 Identities=21% Similarity=0.436 Sum_probs=47.6
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++.+++.. +..|.|+|.|.
T Consensus 57 ~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~ 108 (112)
T 2r4h_A 57 AEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNG---GRRVRLFLKRG 108 (112)
T ss_dssp CTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTT---TTEEEEEEECC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeC
Confidence 37899999988999999999999999999999999999986 77899999875
No 72
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.00 E-value=1.1e-09 Score=74.58 Aligned_cols=52 Identities=23% Similarity=0.587 Sum_probs=48.3
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||.++.++++++++++|++. ++.|.|+|.|.
T Consensus 67 ~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~r~ 118 (123)
T 2iwq_A 67 LEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKA---GNPVVFMVQSI 118 (123)
T ss_dssp CSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC---CSSEEEEEECC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEEC
Confidence 47899999999999999999999999999999999999987 67999999985
No 73
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=9e-10 Score=72.89 Aligned_cols=52 Identities=33% Similarity=0.499 Sum_probs=48.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++..++.. +..+.|+|.|.
T Consensus 44 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~ 95 (110)
T 1um1_A 44 LPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG---GKKMRFLVAKS 95 (110)
T ss_dssp CTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC---CSEEEEEEECC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeC
Confidence 37899999999999999999999999999999999999986 78999999986
No 74
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.00 E-value=1.5e-09 Score=71.05 Aligned_cols=53 Identities=26% Similarity=0.473 Sum_probs=48.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.|+|++||+|++|||.++.++++.+++.+|+.. +..|.|+|.|..
T Consensus 46 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~g 98 (104)
T 2djt_A 46 LKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAG---GPQLHLVIRRPL 98 (104)
T ss_dssp CTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHT---CSEEEEEECCCC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECC
Confidence 37899999999999999999999999999999999999986 789999998863
No 75
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.99 E-value=1e-09 Score=84.32 Aligned_cols=54 Identities=30% Similarity=0.354 Sum_probs=49.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
+++|+|+++++|++||+|++|||+++.+++|++++.+|++. +..|+|+|.|...
T Consensus 111 ~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~---g~~V~L~V~R~~~ 164 (263)
T 1z87_A 111 FKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT---GKEVVLEVKYMKE 164 (263)
T ss_dssp CTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC---CSCCCEEEECCSS
T ss_pred CCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC---CCeEEEEEEeCcc
Confidence 47899999999999999999999999999999999999997 7889999998644
No 76
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.99 E-value=1.2e-09 Score=71.24 Aligned_cols=52 Identities=27% Similarity=0.537 Sum_probs=48.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++..++.. +..+.|+|.|.
T Consensus 43 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~r~ 94 (104)
T 3i4w_A 43 LAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA---GQTVTIIAQYK 94 (104)
T ss_dssp CTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTS---CSEEEEEEEEC
T ss_pred CCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEEC
Confidence 37899999999999999999999999999999999999986 78899999886
No 77
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.99 E-value=1.2e-09 Score=72.02 Aligned_cols=53 Identities=43% Similarity=0.797 Sum_probs=48.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+|+.. +..|.|+|.|..
T Consensus 52 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~~ 104 (108)
T 2jre_A 52 IPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNA---GNPVRLLLIRRL 104 (108)
T ss_dssp CTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHH---CSEEEEEEEECC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCC
Confidence 37899999999999999999999999999999999999986 789999998863
No 78
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.99 E-value=1.9e-09 Score=73.52 Aligned_cols=52 Identities=19% Similarity=0.342 Sum_probs=44.8
Q ss_pred hhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCCCC
Q psy1030 7 ALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWDPN 59 (114)
Q Consensus 7 a~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~~~ 59 (114)
+.+++|++||.|++|||.++++++|+|++++|+++. .+..|+|+|.|...+.
T Consensus 45 ~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~-~G~~v~L~V~R~g~~~ 96 (113)
T 3soe_A 45 QWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFP-VGADVPLLILRGGPPS 96 (113)
T ss_dssp GGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSC-TTCEEEEEEEESSCC-
T ss_pred HHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CCCEEEEEEEECCccC
Confidence 567899999999999999999999999999999862 2568999999975433
No 79
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.98 E-value=1.1e-09 Score=75.51 Aligned_cols=51 Identities=22% Similarity=0.391 Sum_probs=47.3
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.| |++||+|++|||.++.++++++++.+|++. +..+.|+|.+.
T Consensus 73 ~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---g~~v~l~v~~~ 123 (132)
T 3l4f_D 73 DEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIRQG---GNTLMVKVVMV 123 (132)
T ss_dssp CTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHHHHHHHHT---TTEEEEEEECC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEEC
Confidence 3789999998 999999999999999999999999999987 78999999875
No 80
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.98 E-value=3.8e-09 Score=69.79 Aligned_cols=56 Identities=30% Similarity=0.578 Sum_probs=48.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.|+|++||+|++|||.++.++++++++++|+.. +.+..|.|+|.|...
T Consensus 47 ~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~g~~v~l~v~R~~~ 102 (111)
T 2koj_A 47 LPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRST-KMEGTVSLLVFRQEE 102 (111)
T ss_dssp CSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHC-CCSSEEEEEEEECCC
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCCeEEEEEEeCCC
Confidence 37899999988999999999999999999999999999975 125689999998643
No 81
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.97 E-value=2e-09 Score=69.01 Aligned_cols=52 Identities=37% Similarity=0.569 Sum_probs=47.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++.+|+.. +..+.|+|.|.
T Consensus 41 ~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~r~ 92 (97)
T 2iwn_A 41 TKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT---GQTVLLTLMRR 92 (97)
T ss_dssp CTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTC---CSEEEEEEEEE
T ss_pred CCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeC
Confidence 36889999988999999999999999999999999999885 78999999885
No 82
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.96 E-value=2.4e-09 Score=67.93 Aligned_cols=51 Identities=24% Similarity=0.475 Sum_probs=46.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++++|++.| |++||.|++|||.++.+++++++.++++.. +..+.|+|.|.
T Consensus 35 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~ 85 (88)
T 2uzc_A 35 KDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGC---TGSLNMTLQRE 85 (88)
T ss_dssp CTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSEEEEEEECC
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEeC
Confidence 3688888887 999999999999999999999999999976 78899999875
No 83
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.96 E-value=1.1e-09 Score=75.70 Aligned_cols=54 Identities=22% Similarity=0.425 Sum_probs=48.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++|+|++.|+|++||.|++|||.++.+.++++++++|+.. +.+..|.|+|.|.
T Consensus 57 ~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~-~~G~~v~l~V~R~ 110 (126)
T 1wif_A 57 INKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNI-TIGTVLQIKAYRG 110 (126)
T ss_dssp CTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSC-CSSCEEEEEEESS
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC-CCCCEEEEEEEEC
Confidence 47899999999999999999999999999999999999974 1257899999986
No 84
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.96 E-value=2.5e-09 Score=66.30 Aligned_cols=52 Identities=33% Similarity=0.506 Sum_probs=46.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||.|++|||.++.+++++++.++|+.. .+.+.|+|.|.
T Consensus 29 ~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~ 80 (81)
T 2rcz_A 29 SQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS---KGKLKMVVQRD 80 (81)
T ss_dssp CTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTS---TTEEEEEEEC-
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC---CCeEEEEEEeC
Confidence 36889999888999999999999999999999999999986 56899999874
No 85
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=2e-09 Score=71.81 Aligned_cols=54 Identities=20% Similarity=0.353 Sum_probs=48.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|+++++|++||+|++|||.++.+++++++.++|+.. +..|.|+|.|...
T Consensus 51 ~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~~~ 104 (114)
T 1uew_A 51 IDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKDA---GLSVTLRIIPQEE 104 (114)
T ss_dssp CTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHHT---TTEEEEEECCCSC
T ss_pred CCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCCc
Confidence 37889998788999999999999999999999999999985 7899999998744
No 86
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.95 E-value=2e-09 Score=68.93 Aligned_cols=51 Identities=27% Similarity=0.460 Sum_probs=46.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++++|++.| |++||.|++|||.++.+++++++.++|+.. +..+.|+|.|.
T Consensus 35 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~ 85 (91)
T 2vsp_A 35 QKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSS---GKNVTLLVCGK 85 (91)
T ss_dssp CTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS---CSEEEEEEEC-
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEeC
Confidence 3678888887 999999999999999999999999999986 78999999986
No 87
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.95 E-value=1.5e-09 Score=78.23 Aligned_cols=52 Identities=17% Similarity=0.387 Sum_probs=48.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||+++.++++++++.+|+.. ++.+.|+|.|.
T Consensus 144 ~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~---~~~v~L~V~R~ 195 (206)
T 3r0h_A 144 IQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA---NGKVSMEVTRP 195 (206)
T ss_dssp CTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSEEEEEEEEE
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeC
Confidence 47899999999999999999999999999999999999986 78999999986
No 88
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.95 E-value=3.1e-09 Score=69.44 Aligned_cols=53 Identities=26% Similarity=0.355 Sum_probs=46.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++++|++.| |++||+|++|||.++.++++++++++|+.. ++.|.|+|.|...
T Consensus 44 ~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~~~ 96 (100)
T 1whd_A 44 DSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC---PSEIILLVWRVSG 96 (100)
T ss_dssp CTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHC---SSEEEEEEEECCS
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECCC
Confidence 3678888876 999999999999999999999999999986 5679999998744
No 89
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.95 E-value=2e-09 Score=69.10 Aligned_cols=51 Identities=22% Similarity=0.380 Sum_probs=46.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.| |++||+|++|||.++.++++++++.+|+.. ++.+.+++.|.
T Consensus 37 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~~~~~~~r~ 87 (95)
T 3r68_A 37 EPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG---GDQTTLLVLDK 87 (95)
T ss_dssp CTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT---TTEEEEEEEEC
T ss_pred CCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEECC
Confidence 4789999988 999999999999999999999999999986 77888888876
No 90
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.95 E-value=1.5e-09 Score=77.08 Aligned_cols=53 Identities=38% Similarity=0.579 Sum_probs=48.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.|+|+|++.|+|++||+|++|||.++.++++++++++|++. +..+.|+|.|..
T Consensus 138 ~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~~ 190 (196)
T 3gsl_A 138 IEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT---YDVVYLKVAKPS 190 (196)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSC---CEEEEEEEEEES
T ss_pred CCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcC---CCeEEEEEeCCC
Confidence 37899999999999999999999999999999999999976 788999999863
No 91
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.95 E-value=2.4e-09 Score=68.23 Aligned_cols=50 Identities=24% Similarity=0.410 Sum_probs=45.6
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++.| |++||+|++|||.++.++++.+++.+++.. +..+.|+|.|.
T Consensus 36 ~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~ 85 (89)
T 2q3g_A 36 PGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRAC---GERLSLGLSRA 85 (89)
T ss_dssp TTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTC---TTEEEEEEEEE
T ss_pred CCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCEEEEEEEeC
Confidence 678888887 999999999999999999999999999986 67899999886
No 92
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.94 E-value=2.6e-09 Score=68.16 Aligned_cols=51 Identities=24% Similarity=0.366 Sum_probs=46.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++++|++.| |++||.|++|||.++.+++++++.++|+.. +..+.|+|.|.
T Consensus 36 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~r~ 86 (90)
T 2he4_A 36 DPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAR---EDEARLLVVGP 86 (90)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS---SSEEEEEEECC
T ss_pred CCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCcEEEEEEcc
Confidence 3688999888 999999999999999999999999999986 78999999986
No 93
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.94 E-value=3e-09 Score=71.04 Aligned_cols=53 Identities=26% Similarity=0.513 Sum_probs=48.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|.|++||+|++|||.++.++++++++++|+.. .+.|.|+|.|..
T Consensus 56 ~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~r~~ 108 (113)
T 1va8_A 56 VKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDM---HGTLTFVLIPSS 108 (113)
T ss_dssp CTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC---CEEEEEEEECCC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECC
Confidence 47899999997799999999999999999999999999987 678999999763
No 94
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.94 E-value=1.8e-09 Score=72.39 Aligned_cols=54 Identities=19% Similarity=0.446 Sum_probs=46.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|+|++||+|++|||.++.++++++++.+|+.. ....+.|++.|..
T Consensus 50 ~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~--~~~~~~l~v~R~~ 103 (119)
T 1x6d_A 50 FPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQA--REPRQAVIVTRKL 103 (119)
T ss_dssp CSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHT--TSSSEEEEEEECC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCCeEEEEEEcCC
Confidence 47899999999999999999999999999999999999987 2345667787763
No 95
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=2.2e-09 Score=69.59 Aligned_cols=50 Identities=22% Similarity=0.455 Sum_probs=45.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 54 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r 54 (114)
.++|+|++.| |++||+|++|||.++.+++++++.++|+.. +..|.|+|.+
T Consensus 39 ~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~p 88 (90)
T 1y7n_A 39 MRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNA---VGEIHMKTMP 88 (90)
T ss_dssp CTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHC---CEEEEEEEEC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEE
Confidence 4789999988 999999999999999999999999999976 7789999875
No 96
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.94 E-value=2.9e-09 Score=68.61 Aligned_cols=50 Identities=26% Similarity=0.531 Sum_probs=45.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++ +|++||+|++|||.++.++++.+++..++.. +..+.|+|.|.
T Consensus 43 ~~~spA~~--gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~ 92 (95)
T 1mfg_A 43 QPEGPASK--LLQPGDKIIQANGYSFINIEHGQAVSLLKTF---QNTVELIIVRE 92 (95)
T ss_dssp CTTSTTTT--TCCTTCEEEEETTEECTTCBHHHHHHHHHHC---CSEEEEEEEEE
T ss_pred CCCCchhh--CCCCCCEEEEECCEEcCCCCHHHHHHHhhcC---CCeEEEEEEeC
Confidence 36888988 7999999999999999999999999999976 78899999986
No 97
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=1.1e-09 Score=73.57 Aligned_cols=55 Identities=20% Similarity=0.401 Sum_probs=47.3
Q ss_pred CCCchhhhc-CCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCC-CCcEEEEEEec
Q psy1030 1 MKGGAVALD-GRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK-PGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~-GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~-~~~V~L~V~r~ 55 (114)
.++|+|++. |+|++||+|++|||.++.++++++++.+++..... ...|.|+|.|.
T Consensus 49 ~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~ 105 (119)
T 2cs5_A 49 APGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 105 (119)
T ss_dssp CSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECC
T ss_pred CCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcc
Confidence 478999998 78999999999999999999999999999986100 14899999986
No 98
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.94 E-value=3.3e-09 Score=67.71 Aligned_cols=51 Identities=25% Similarity=0.401 Sum_probs=45.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.| |++||+|++|||.++.++++.+++.+++.. +..+.|+|.|.
T Consensus 40 ~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~ 90 (91)
T 1m5z_A 40 RPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAES---GNKLDLVISRN 90 (91)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS---TTEEEEEEEEC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEeC
Confidence 3688999887 999999999999999999999999999876 77899999874
No 99
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.94 E-value=3.4e-09 Score=67.54 Aligned_cols=52 Identities=33% Similarity=0.506 Sum_probs=46.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||.|++|||.++.+++++++.++|++. .+.+.|+|.|.
T Consensus 31 ~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~r~ 82 (92)
T 3cyy_A 31 SQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS---KGKLKMVVQRD 82 (92)
T ss_dssp CTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT---TTEEEEEEEC-
T ss_pred CCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCcEEEEEEeC
Confidence 36889999888999999999999999999999999999986 56899999885
No 100
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.94 E-value=3.8e-09 Score=68.52 Aligned_cols=52 Identities=19% Similarity=0.275 Sum_probs=47.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.| |++||.|++|||.++.++++++++.+|+.. +..+.|+|.|..
T Consensus 42 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~~ 93 (99)
T 3khf_A 42 EDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKS---GNKISLRTTALE 93 (99)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHS---CSEEEEEEECSC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC---CCEEEEEEEECC
Confidence 3788999888 999999999999999999999999999976 789999999853
No 101
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.92 E-value=3.8e-09 Score=67.43 Aligned_cols=51 Identities=24% Similarity=0.401 Sum_probs=44.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.| |++||.|++|||.++.++++++++.+|++. .+.+.+.+.++
T Consensus 35 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~~~~~~~~r 85 (91)
T 1g9o_A 35 EPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAA---LNAVRLLVVDP 85 (91)
T ss_dssp CTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC---SSEEEEEEECC
T ss_pred CCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCcEEEEEEcC
Confidence 3788898888 999999999999999999999999999987 57667766655
No 102
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.92 E-value=3.1e-09 Score=69.38 Aligned_cols=52 Identities=27% Similarity=0.504 Sum_probs=46.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.| |++||.|++|||.++.++++++++..|++. .+..+.|+|.|.
T Consensus 53 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~g~~v~l~v~R~ 104 (104)
T 3sfj_A 53 SEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKR--SEEVVRLLVTRQ 104 (104)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCT--TCSEEEEEEEEC
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCCEEEEEEEcC
Confidence 3788999988 999999999999999999999999999874 356899999874
No 103
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.92 E-value=3.5e-09 Score=69.26 Aligned_cols=50 Identities=26% Similarity=0.531 Sum_probs=45.6
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++ +|++||+|++|||.++.++++.+++..++.. +..+.|+|.|.
T Consensus 51 ~~~spA~~--gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~ 100 (103)
T 1n7t_A 51 QPEGPASK--LLQPGDKIIQANGYSFINIEHGQAVSLLKTF---QNTVELIIVRE 100 (103)
T ss_dssp SSSSTTSS--SCCTTCEEEEETTEECSSCCHHHHHHHHHHC---CSEEEEEEECC
T ss_pred CCCCchHH--CCCCCCEEEEECCEECCCCCHHHHHHHhhcC---CCeEEEEEEec
Confidence 36788888 7999999999999999999999999999976 78899999986
No 104
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.92 E-value=3.9e-09 Score=68.32 Aligned_cols=51 Identities=25% Similarity=0.453 Sum_probs=45.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.| |++||+|++|||.++.+++++++.++|+.. ++.+.|+|.+.
T Consensus 45 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~~~ 95 (96)
T 2ego_A 45 HESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIKAS---GNVLRLETLYG 95 (96)
T ss_dssp CTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHT---TTEEEEEEECC
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEEC
Confidence 3688898887 999999999999999999999999999987 66999998753
No 105
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.92 E-value=5.8e-09 Score=66.12 Aligned_cols=51 Identities=27% Similarity=0.517 Sum_probs=45.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.|+|+|++.| |++||.|++|||.++.+++++++.++|+.. ...+.|+|.|.
T Consensus 34 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~ 84 (87)
T 2pa1_A 34 AERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQS---PSPLRLQLDRI 84 (87)
T ss_dssp CSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTC---CSSEEEEEEEC
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEec
Confidence 3678888755 999999999999999999999999999987 48999999986
No 106
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.91 E-value=3.9e-09 Score=69.25 Aligned_cols=51 Identities=20% Similarity=0.400 Sum_probs=46.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.| |++||.|++|||.++.++++++++.+|+.. +..|.|+|.|.
T Consensus 34 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~ 84 (106)
T 3ngh_A 34 EEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKS---GNSVTLLVLDG 84 (106)
T ss_dssp CTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHT---TTEEEEEEECH
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCEEEEEEEEC
Confidence 3688888887 999999999999999999999999999976 78999999975
No 107
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.91 E-value=4.8e-09 Score=71.02 Aligned_cols=54 Identities=31% Similarity=0.597 Sum_probs=47.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||+++.++++++++++|+.. +.+..|.|+|.|.
T Consensus 66 ~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-~~g~~v~l~v~R~ 119 (121)
T 2kom_A 66 LPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRST-KMEGTVSLLVFRQ 119 (121)
T ss_dssp CTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHC-CSSCEEEEEEEEC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC-CCCCEEEEEEEeC
Confidence 37899999988999999999999999999999999999975 1256899999875
No 108
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.91 E-value=4.3e-09 Score=67.88 Aligned_cols=52 Identities=19% Similarity=0.263 Sum_probs=47.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||.|++|||.++.+++++++.++|+.. +..+.|+|.|..
T Consensus 38 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~~ 89 (96)
T 2v90_A 38 DPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQ---GSCVSLTVVDPE 89 (96)
T ss_dssp CTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT---TTEEEEEEECCC
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEEEEEEECCC
Confidence 3688888887 999999999999999999999999999985 789999999863
No 109
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=2.7e-09 Score=69.72 Aligned_cols=52 Identities=23% Similarity=0.379 Sum_probs=46.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.|+|++||+|++|||.++.++ +++++.+++.. +..|.|+|.|..
T Consensus 43 ~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~---~~~v~l~v~R~~ 94 (100)
T 2edp_A 43 EDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGS---FRILKLIVRRRN 94 (100)
T ss_dssp CTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTC---CSSCEEEEEECC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhC---CCeEEEEEEeCC
Confidence 37899999988999999999999999997 88999999986 688999999863
No 110
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.90 E-value=2.1e-09 Score=73.08 Aligned_cols=52 Identities=19% Similarity=0.288 Sum_probs=47.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||+|++|||.++.++++++++++|+.. +..|.|+|.|..
T Consensus 69 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~~ 120 (126)
T 2yuy_A 69 KEGGPAFEAG-LCTGDRIIKVNGESVIGKTYSQVIALIQNS---DTTLELSVMPKD 120 (126)
T ss_dssp CSSSHHHHHT-CCSSCCCCEETTEECSSCCHHHHHHHHHTC---TTEEEEECCCCC
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEECC
Confidence 3688999988 999999999999999999999999999986 789999998863
No 111
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.90 E-value=6.4e-09 Score=68.28 Aligned_cols=51 Identities=25% Similarity=0.494 Sum_probs=45.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||+|++|||+++.++++++++++|+. +..+.|+|.|..
T Consensus 49 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~----~~~v~l~v~r~~ 99 (104)
T 1wi2_A 49 IPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT----AREISMRVRFFS 99 (104)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH----SSSEEEEEECCC
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC----CCEEEEEEEECC
Confidence 3688899877 99999999999999999999999999997 478999999863
No 112
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.90 E-value=7.8e-09 Score=66.63 Aligned_cols=53 Identities=26% Similarity=0.486 Sum_probs=46.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++++|++.| |++||.|++|||.++.+++++++.++|+.. ...+.|+|.|...
T Consensus 38 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~g~ 90 (94)
T 1vb7_A 38 TERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQS---ASPLRLQLDRSSG 90 (94)
T ss_dssp CTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSSEEEEEECCCC
T ss_pred CCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCcEEEEEEECCc
Confidence 3678888765 999999999999999999999999999987 5889999998643
No 113
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.89 E-value=5.2e-09 Score=69.15 Aligned_cols=50 Identities=22% Similarity=0.419 Sum_probs=45.9
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++.| |++||+|++|||.++.++++++++++|+.. +..+.|+|.+.
T Consensus 54 ~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~~~ 103 (109)
T 1q3o_A 54 EGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIRQG---GNTLMVKVVMV 103 (109)
T ss_dssp TTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHT---TTEEEEEEEEE
T ss_pred CCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCEEEEEEEEC
Confidence 678888887 999999999999999999999999999986 67899999886
No 114
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.88 E-value=5.7e-09 Score=70.12 Aligned_cols=52 Identities=27% Similarity=0.445 Sum_probs=47.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||.|++|||.++.+.+++++.++|+.. ++.|.|+|.+.
T Consensus 58 ~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~~~ 109 (114)
T 2gzv_A 58 FDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV---KGEVTIHYNKL 109 (114)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC---CSEEEEEEECC
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEec
Confidence 37899999999999999999999999999999999999986 56799999764
No 115
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.88 E-value=6.7e-09 Score=66.36 Aligned_cols=52 Identities=27% Similarity=0.347 Sum_probs=46.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||.|++|||.++.++++.++..+|+.. +..+.|+|.|..
T Consensus 35 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~g 86 (91)
T 2pkt_A 35 TPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGC---TDNLTLTVARSE 86 (91)
T ss_dssp CTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC---SSEEEEEEEEEC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECC
Confidence 3678888877 999999999999999999999999999985 789999999863
No 116
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=4.8e-09 Score=69.28 Aligned_cols=51 Identities=29% Similarity=0.545 Sum_probs=46.9
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++.|+|++||+|++|||+++.++++.+++.+++.. +..+.|+|.|.
T Consensus 48 ~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~r~ 98 (113)
T 1um7_A 48 AGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRA---GQSVTIVAQYR 98 (113)
T ss_dssp SSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSC---CSEEEEEEECC
T ss_pred CCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCcEEEEEEEC
Confidence 6889999888999999999999999999999999999976 78899999875
No 117
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.87 E-value=5.5e-09 Score=69.94 Aligned_cols=52 Identities=27% Similarity=0.537 Sum_probs=47.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||.++.++++.+++..++.. +..+.|+|.|+
T Consensus 46 ~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~r~ 97 (119)
T 1tp5_A 46 LAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA---GQTVTIIAQYK 97 (119)
T ss_dssp CTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTS---CSEEEEEEEEC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEEC
Confidence 37899999988999999999999999999999999999986 78899999986
No 118
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.87 E-value=5.7e-09 Score=75.18 Aligned_cols=54 Identities=20% Similarity=0.211 Sum_probs=49.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCC--CCHHHHHHHHHhccCCCCc-EEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFEN--MSNDEAVRVLREVVQKPGP-IKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~--~s~~eAv~~Lr~~~~~~~~-V~L~V~r~~~ 57 (114)
+++|+|++.|+|+.||+|++|||+++.+ +++.+++.+++.. +.. +.|+|.|...
T Consensus 53 ~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~---~~~~v~l~v~R~~~ 109 (206)
T 3r0h_A 53 YPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTT---YEKAVTLTVFRADP 109 (206)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSC---CSSEEEEEEECCSS
T ss_pred CCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhc---CCCceEEEEEeccc
Confidence 4789999999999999999999999999 9999999999987 566 9999998643
No 119
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.87 E-value=6.1e-09 Score=65.55 Aligned_cols=50 Identities=20% Similarity=0.421 Sum_probs=44.3
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++. +|++||.|++|||.++.++++.+++.+++.. +..+.|+|.|.
T Consensus 34 ~~spA~~a-Gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~R~ 83 (85)
T 1rgw_A 34 PGSKAAQS-QLSQGDLVVAIDGVNTDTMTHLEAQNKIKSA---SYNLSLTLQKS 83 (85)
T ss_dssp TTSHHHHS-SCCCCSBEEEETTEECTTCCHHHHHHHHTTC---SSCEEEEEESC
T ss_pred CCCHHHHc-CCCCCCEEEEECCEECCCcCHHHHHHHHHcC---CCeEEEEEEeC
Confidence 67888775 5999999999999999999999999999876 56799999875
No 120
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.87 E-value=1e-08 Score=66.08 Aligned_cols=50 Identities=28% Similarity=0.382 Sum_probs=45.1
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++.| |++||+|++|||.++.++++.+++.+++.. +..+.|+|.|.
T Consensus 41 ~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~ 90 (94)
T 2eeg_A 41 AGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGC---HDHLTLSVSSG 90 (94)
T ss_dssp SSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTC---CSCEEEEEECC
T ss_pred CCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeC
Confidence 678888876 999999999999999999999999999885 67899999885
No 121
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.87 E-value=1e-08 Score=66.05 Aligned_cols=51 Identities=27% Similarity=0.400 Sum_probs=45.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||.|++|||.++.++++.+++..++. +..|.|+|.|..
T Consensus 37 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~----g~~v~l~v~R~~ 87 (93)
T 2dls_A 37 RPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKS----GAYVALTLLGSS 87 (93)
T ss_dssp CSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHTS----SSEEEEEEECCC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC----CCEEEEEEEECC
Confidence 3788898887 99999999999999999999998888873 689999999863
No 122
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.87 E-value=8.2e-09 Score=67.65 Aligned_cols=52 Identities=19% Similarity=0.311 Sum_probs=46.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.| |++||+|++|||.++.++++++++.+++.. +..+.|+|.|..
T Consensus 40 ~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~r~~ 91 (106)
T 2eei_A 40 TPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKS---GSRVMFLLVDKE 91 (106)
T ss_dssp CTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHH---CSEEEEEECCTT
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEcCc
Confidence 3688899888 999999999999999999999999999976 678999998863
No 123
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.86 E-value=1.1e-08 Score=66.73 Aligned_cols=51 Identities=22% Similarity=0.365 Sum_probs=46.0
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
++++|++.| |++||.|++|||.++.+++++++..+|++. +..+.|+|.|..
T Consensus 39 ~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~~ 89 (102)
T 2d90_A 39 PGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG---GDQTTLLVLDKE 89 (102)
T ss_dssp TTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHS---TTEEEEEECSTT
T ss_pred CCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEECC
Confidence 678888877 999999999999999999999999999986 789999998763
No 124
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.86 E-value=2.3e-09 Score=71.79 Aligned_cols=51 Identities=25% Similarity=0.375 Sum_probs=45.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|+ ++|++||+|++|||.++.++++++++.+|++. +..|.|+|.|+.
T Consensus 54 ~~~spA~--~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~~ 104 (117)
T 2csj_A 54 LPGGPAD--GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKS---GKIAAIVVKRPR 104 (117)
T ss_dssp CTTSSHH--HHBCTTCEEEEESSCBCBTCCHHHHHHHHHHS---CSEEEEEEEEEE
T ss_pred CCCCccc--ccCCCCCEEEEECCEECCCcCHHHHHHHHhcC---CCeEEEEEEECC
Confidence 3678884 88999999999999999999999999999986 789999999863
No 125
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.85 E-value=6.8e-09 Score=70.15 Aligned_cols=56 Identities=20% Similarity=0.256 Sum_probs=48.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++++|++.|.|++||+|++|||+++.+++++++.++|+.. ..+..|.|+|.|...
T Consensus 53 ~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 53 EADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS-SITSKVTLEIEFDVA 108 (122)
T ss_dssp CTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHH-TTTTCEEEEEEEECC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCCeEEEEEEECCc
Confidence 37889999988999999999999999999999999999986 114689999999743
No 126
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.84 E-value=1.3e-08 Score=65.42 Aligned_cols=52 Identities=27% Similarity=0.429 Sum_probs=46.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.| |++||.|++|||.++.++++.+++..++.. +..+.|+|.|..
T Consensus 42 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~g 93 (97)
T 2w4f_A 42 SEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGA---GTAVQMRVWRER 93 (97)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS---CSEEEEEEECCS
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC---CCeEEEEEEeCC
Confidence 3788999888 999999999999999999999999888876 789999999863
No 127
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.84 E-value=8.4e-09 Score=67.49 Aligned_cols=52 Identities=19% Similarity=0.434 Sum_probs=46.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||+|++|||.++.++++.+++.+++.. +..+.|+|.|..
T Consensus 37 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~g 88 (103)
T 1wf7_A 37 KDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKAC---TGSLNMTLQRAS 88 (103)
T ss_dssp CTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHC---SSEEEEEECCCS
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEeCC
Confidence 3688888887 999999999999999999999999999986 678999998863
No 128
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.84 E-value=7.6e-09 Score=68.96 Aligned_cols=51 Identities=20% Similarity=0.400 Sum_probs=46.6
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.| |++||+|++|||.++.++++++++++|+.. +..|.|+|.|.
T Consensus 46 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~ 96 (114)
T 2edz_A 46 EEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKS---GNSVTLLVLDG 96 (114)
T ss_dssp CTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHT---CSEEEEEEECH
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEEC
Confidence 3688898887 999999999999999999999999999986 78999999985
No 129
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=1.5e-08 Score=66.92 Aligned_cols=52 Identities=27% Similarity=0.418 Sum_probs=47.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||+|++|||.++.++++.+++..++.. +..|.|+|.|..
T Consensus 54 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~g 105 (110)
T 1x5q_A 54 SEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGA---GTAVQMRVWRES 105 (110)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHSC---CSEEEEEEEECS
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhhCC---CCeEEEEEEECC
Confidence 3688999888 999999999999999999999999999875 789999999864
No 130
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.82 E-value=1.1e-08 Score=72.52 Aligned_cols=53 Identities=34% Similarity=0.552 Sum_probs=49.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.|+|+|++.|+|++||+|++|||+++.++++.+++.+++.. +..+.|+|.|..
T Consensus 43 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~r~~ 95 (196)
T 3gsl_A 43 IPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEA---GSIVRLYVMRRK 95 (196)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTS---CSEEEEEEEEEC
T ss_pred CCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCcEEEEEEecC
Confidence 47899999999999999999999999999999999999987 789999998864
No 131
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.82 E-value=1.2e-08 Score=73.09 Aligned_cols=50 Identities=26% Similarity=0.531 Sum_probs=46.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++ +|++||.|++|||.++.+++|.+++..++.. +..|.|+|.|.
T Consensus 32 ~~~spA~~--gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l~v~r~ 81 (195)
T 2qbw_A 32 QPEGPASK--LLQPGDKIIQANGYSFINIEHGQAVSLLKTF---QNTVELIIVRE 81 (195)
T ss_dssp CTTSTTTT--TCCTTCEEEEETTEECTTCCHHHHHHHHHHC---CSEEEEEEEEE
T ss_pred CCCChHHh--CCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEEc
Confidence 47889998 6999999999999999999999999999987 67999999984
No 132
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.81 E-value=1.5e-08 Score=68.04 Aligned_cols=52 Identities=15% Similarity=0.273 Sum_probs=45.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCC-cEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG-PIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~-~V~L~V~r~~ 56 (114)
.++++|++.| |++||.|++|||.++.+++++++.++|++. ++ .|.|+|.|..
T Consensus 52 ~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~---~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 52 DPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSF---GEDEIEMKVVSLL 104 (109)
T ss_dssp CTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT---TTSCEEEEEESCC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCCeEEEEEEECC
Confidence 3678888865 999999999999999999999999999986 44 5999999864
No 133
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.80 E-value=1.9e-08 Score=63.89 Aligned_cols=52 Identities=23% Similarity=0.433 Sum_probs=42.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++++|+ ++|++||.|++|||.++.++++++++++|++. +.+..+.|+|.|.
T Consensus 34 v~~spA~--aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~g~~v~l~v~R~ 85 (88)
T 3bpu_A 34 IVDSPRS--RGLKEGDLIVEVNKKNVQALTHNQVVDMLVES-PKGSEVTLLVQRQ 85 (88)
T ss_dssp CCC--CC--TTCCTTCEEEEETTEECTTSCHHHHHHHHHTS-CTTCEEEEEEEEE
T ss_pred ecCChhH--hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC-CCCCEEEEEEEeC
Confidence 3677777 68999999999999999999999999999853 1257899999885
No 134
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=2.6e-08 Score=64.84 Aligned_cols=50 Identities=22% Similarity=0.349 Sum_probs=43.2
Q ss_pred hhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 7 ALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 7 a~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
+..++|++||+|++|||.++.+++|++++++|+... .+..|.|+|.|...
T Consensus 43 a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 43 QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCP-IGSETSLIIHRGSG 92 (96)
T ss_dssp GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSC-TTSEEEEEEECCSS
T ss_pred cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CCCEEEEEEEECCC
Confidence 356889999999999999999999999999999851 15789999998744
No 135
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=2.8e-08 Score=64.67 Aligned_cols=51 Identities=25% Similarity=0.423 Sum_probs=45.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||+|++|||.++.++++++++..|+. +..+.|+|.|..
T Consensus 44 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~----~~~v~l~v~R~g 94 (100)
T 2eeh_A 44 EEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS----SSRLHMMVRRMG 94 (100)
T ss_dssp CTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS----CSSEEEEEEECS
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC----CCEEEEEEEECC
Confidence 3688899888 99999999999999999999999999986 588999999863
No 136
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.76 E-value=1.8e-08 Score=70.00 Aligned_cols=54 Identities=26% Similarity=0.441 Sum_probs=47.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++|+|++.| |++||.|++|||.++.++++++++++|+.. .+..|.|+|.|...
T Consensus 72 ~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~--~g~~v~l~v~R~g~ 125 (139)
T 2vz5_A 72 SEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKR--SEEVVRLLVTRQSL 125 (139)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHCCT--TCSEEEEEEEECC-
T ss_pred CCCCHHHHCC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCCEEEEEEEECCE
Confidence 3788999988 999999999999999999999999999974 35789999998743
No 137
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.76 E-value=1.4e-08 Score=66.49 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=46.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||.|++|||.++.+++++++.++|+.. +..+.|+|.|..
T Consensus 37 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~g 88 (103)
T 1v5l_A 37 TPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAA---SYQLCLKIDRAE 88 (103)
T ss_dssp CTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTC---CSEEECEECCCT
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEECC
Confidence 3678888865 999999999999999999999999999986 789999999863
No 138
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.76 E-value=1.2e-08 Score=66.03 Aligned_cols=52 Identities=21% Similarity=0.286 Sum_probs=44.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.| |++||+|++|||.++.+++++++.++|+.. .+..+.|+|.|.
T Consensus 41 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~~~~l~v~R~ 92 (98)
T 2jxo_A 41 DPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG--GDETKLLVVDRE 92 (98)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT--TTEEEEEECCHH
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCcEEEEEEECC
Confidence 3688999988 999999999999999999999999999986 244566888764
No 139
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.75 E-value=1e-08 Score=67.19 Aligned_cols=48 Identities=15% Similarity=0.375 Sum_probs=43.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEE
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVV 52 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V 52 (114)
.++|+|++.| |++||+|++|||+++.++++++++++|+.. ++.|.|+|
T Consensus 56 ~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~---~~~v~l~v 103 (104)
T 2z17_A 56 QEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRSS---GNLLTIET 103 (104)
T ss_dssp CTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHHT---TTEEEEEC
T ss_pred CCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhC---CCcEEEEE
Confidence 3688999988 999999999999999999999999999987 56788775
No 140
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.74 E-value=4.3e-08 Score=64.74 Aligned_cols=54 Identities=33% Similarity=0.537 Sum_probs=47.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|-|++||.|++|||.++.+++++++.++|+.. .+..+.|+|.|..
T Consensus 34 ~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~g~~v~l~v~R~g 87 (112)
T 1qau_A 34 IRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI--ASETHVVLILRGP 87 (112)
T ss_dssp CTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHS--CSSSEEEEEEECC
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCCcEEEEEEeCC
Confidence 37889999886699999999999999999999999999985 3578999999863
No 141
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.74 E-value=1.7e-08 Score=73.02 Aligned_cols=51 Identities=22% Similarity=0.462 Sum_probs=46.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.+||+|++.| |++||+|++|||.++.++++++++.+|+. +..|.|+|.|..
T Consensus 118 ~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~----~~~v~l~v~r~g 168 (192)
T 3k1r_A 118 IKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT----EKTVSIKVRHIG 168 (192)
T ss_dssp CTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS----SSEEEEEEEECC
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC----CCeEEEEEEECC
Confidence 4789999998 99999999999999999999999999986 588999999863
No 142
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.74 E-value=2.5e-08 Score=67.97 Aligned_cols=53 Identities=32% Similarity=0.574 Sum_probs=46.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.|+++|++.| |++||+|++|||.++.++++++++.+|+.. +.+..+.|+|.|.
T Consensus 59 ~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~g~~v~l~v~R~ 111 (124)
T 3tsv_A 59 LEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDL-PKGEEVTILAQKK 111 (124)
T ss_dssp CTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHS-CTTCEEEEEEEEC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc-CCCCEEEEEEEEC
Confidence 3788998887 999999999999999999999999998863 1267899999886
No 143
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.21 E-value=1.1e-09 Score=73.54 Aligned_cols=49 Identities=33% Similarity=0.514 Sum_probs=44.0
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEE
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVA 53 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~ 53 (114)
++|+|+++++|++||+|++|||.++.++++++++.+|++. ++.|+|+|.
T Consensus 62 ~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~---~~~v~l~V~ 110 (112)
T 2lob_A 62 PGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ---RGEIEFEVV 110 (112)
Confidence 6889999888999999999999999999999999999976 567888775
No 144
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.73 E-value=4.2e-08 Score=64.30 Aligned_cols=51 Identities=25% Similarity=0.437 Sum_probs=44.9
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
++++|+ ++|++||+|++|||.++.++++.+++..++.. +..+.|+|.|...
T Consensus 48 ~~spA~--agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 48 KGGPAE--GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKS---GKNAKITIRRKKG 98 (107)
T ss_dssp TTSTTB--TTBCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSEEEEEEEEESC
T ss_pred CCCchh--hCCCCCCEEEEECCEECCCccHHHHHHHhhCC---CCEEEEEEEECCC
Confidence 677887 78999999999999999999999999888865 7889999998643
No 145
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.72 E-value=3.1e-08 Score=71.30 Aligned_cols=52 Identities=27% Similarity=0.497 Sum_probs=48.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||+|++|||.++.+++++++.++|+.. +..+.|+|.|.
T Consensus 143 ~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~ 194 (200)
T 2qt5_A 143 RPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC---GQEATLLIEYD 194 (200)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT---CSEEEEEEEEE
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEEC
Confidence 37899999999999999999999999999999999999985 78999999986
No 146
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.72 E-value=3.2e-08 Score=71.21 Aligned_cols=53 Identities=30% Similarity=0.458 Sum_probs=48.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.++|++||+|++|||+++.+++|.+++.+|+.. +..|.|+|.|..
T Consensus 41 ~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~R~~ 93 (200)
T 2qt5_A 41 RQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNV---GERVVLEVEYEL 93 (200)
T ss_dssp CTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTC---CSEEEEEEEEEC
T ss_pred CCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEeccC
Confidence 37889999888999999999999999999999999999887 778999999864
No 147
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=2.7e-08 Score=66.45 Aligned_cols=52 Identities=21% Similarity=0.319 Sum_probs=45.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||+|++|||+++.++++.+++..++.. +..+.|+|.|..
T Consensus 50 ~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~---g~~v~l~v~r~~ 101 (117)
T 1uit_A 50 TVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQ---CDTITILAQYNP 101 (117)
T ss_dssp CTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSC---CSEEEEEECCCS
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEEEECC
Confidence 3788999988 999999999999999999999988777655 778999999863
No 148
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.65 E-value=4.7e-08 Score=66.09 Aligned_cols=54 Identities=33% Similarity=0.537 Sum_probs=47.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.|-|++||.|++|||.++.+++++++.++|+.. .+..+.|+|.|..
T Consensus 41 ~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~g~~v~l~v~R~g 94 (127)
T 1b8q_A 41 IRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI--ASETHVVLILRGP 94 (127)
T ss_dssp SSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSC--CSSCEEEEEECCC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCCeEEEEEEeCC
Confidence 37889999886699999999999999999999999999975 3578999999863
No 149
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.64 E-value=7.7e-08 Score=69.23 Aligned_cols=52 Identities=29% Similarity=0.519 Sum_probs=48.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.|+|++||.|++|||.++.+++++++.++|++. +..+.|+|.|.
T Consensus 143 ~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~---~~~v~l~v~R~ 194 (196)
T 1p1d_A 143 KKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC---EDLVKLKIRKD 194 (196)
T ss_dssp CSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC---TTCEEEEEECC
T ss_pred CCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCEEEEEEEeC
Confidence 36889999988999999999999999999999999999986 78999999985
No 150
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=1.3e-07 Score=63.96 Aligned_cols=53 Identities=34% Similarity=0.448 Sum_probs=45.6
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.++++|++.|+|++||.|++|||..+.+ ++++.++|+.. .+..|.|+|.|...
T Consensus 56 ~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~~--~g~~v~l~v~R~g~ 108 (124)
T 1wh1_A 56 DPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSE--ENKNFSLLIARPEL 108 (124)
T ss_dssp CSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTCS--SCCSCCEEEEECSS
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHhC--CCCEEEEEEEECCE
Confidence 3789999988899999999999999985 88999999874 36789999998744
No 151
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.63 E-value=3.9e-08 Score=83.77 Aligned_cols=53 Identities=34% Similarity=0.552 Sum_probs=49.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.+||+|++.|+|++||+|++|||+++.+++|++++.+|+.+ +..|+|+|.|..
T Consensus 97 ~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---g~~v~l~v~R~~ 149 (721)
T 2xkx_A 97 IPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEA---GSIVRLYVMRRK 149 (721)
T ss_pred CCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhcc---ccccceEEEecc
Confidence 47899999999999999999999999999999999999987 778999998764
No 152
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.62 E-value=9.1e-08 Score=60.76 Aligned_cols=52 Identities=17% Similarity=0.341 Sum_probs=43.9
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++.| |++||.|++|||.++.+.++++..++|+.. +.+..+.|+|.|.
T Consensus 37 ~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~g~~v~l~v~R~ 88 (90)
T 2eaq_A 37 AGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKA-QETGHLVMDVRRY 88 (90)
T ss_dssp TTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHH-HHHTEEEEEEEEE
T ss_pred CCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhc-CCCCEEEEEEEeC
Confidence 678888776 999999999999999888999999999853 1157899999875
No 153
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.62 E-value=6.3e-08 Score=79.60 Aligned_cols=53 Identities=32% Similarity=0.574 Sum_probs=47.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++||+|++.| |++||+|++|||+++.++++++++.+|++. +.++.|+|+|.|.
T Consensus 31 ~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~-~~g~~v~L~V~r~ 83 (468)
T 3shw_A 31 LEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDL-PKGEEVTILAQKK 83 (468)
T ss_dssp CSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHS-CTTSEEEEEEEEC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc-CCCCEEEEEEEEC
Confidence 4899999987 999999999999999999999999999983 1267999999985
No 154
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=1.1e-07 Score=64.38 Aligned_cols=51 Identities=35% Similarity=0.474 Sum_probs=44.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||.|++|||..+.++++.++++.++.. ..+.|+|.|..
T Consensus 54 ~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~----~~v~l~v~R~g 104 (128)
T 1uf1_A 54 DPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS----RHLILTVKDVG 104 (128)
T ss_dssp CTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC----SEEEEEEECCS
T ss_pred CCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC----CeEEEEEEECC
Confidence 3688888887 999999999999999999999999998874 68999999863
No 155
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.60 E-value=7.2e-08 Score=64.63 Aligned_cols=52 Identities=15% Similarity=0.346 Sum_probs=44.8
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
++++|++.| |++||.|++|||.++.+++++++.++|+.. .+..+.|+|.+..
T Consensus 45 ~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~--~~~~v~l~V~~~~ 96 (111)
T 1vae_A 45 PHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSF--GGEEVEMKVVSLL 96 (111)
T ss_dssp TTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHT--TTSEECEEEECEE
T ss_pred CCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCceEEEEEEecC
Confidence 678888765 999999999999999999999999999986 2335999998863
No 156
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.60 E-value=8.3e-08 Score=64.73 Aligned_cols=52 Identities=21% Similarity=0.286 Sum_probs=45.5
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++|+|++.| |++||.|++|||.++.+++++++..+|+.. .+..+.|+|.|.
T Consensus 41 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~~~~l~v~R~ 92 (128)
T 2kjd_A 41 DPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG--GDETKLLVVDRE 92 (128)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT--CSEEEEEEECHH
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCCEEEEEEEeC
Confidence 3788999988 999999999999999999999999999986 245677888875
No 157
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=7.1e-08 Score=65.15 Aligned_cols=50 Identities=20% Similarity=0.330 Sum_probs=44.3
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||+|++|||.++.+++++++.++|++ ..+.|+|.|..
T Consensus 52 ~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~-----~~v~l~v~R~p 101 (114)
T 2d8i_A 52 KETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ-----PSLGLLVRTYP 101 (114)
T ss_dssp CTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS-----SEEEEEEEECC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC-----CcEEEEEEECC
Confidence 3688898887 99999999999999999999999999984 38999999873
No 158
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.59 E-value=4.8e-08 Score=77.92 Aligned_cols=54 Identities=22% Similarity=0.527 Sum_probs=48.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+|||+|++.|+|++||+|++|||+++.++++++++.+|+.. ..+..|+|+|.|+
T Consensus 240 ~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~-~~~~~v~l~v~r~ 293 (388)
T 3suz_A 240 MNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGL-KNQTQVKLNIVSC 293 (388)
T ss_dssp CCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTC-TTCSCEEEEEEEC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhc-cCCCccccccccc
Confidence 47899999999999999999999999999999999999986 1245699999986
No 159
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=6.2e-08 Score=62.97 Aligned_cols=50 Identities=30% Similarity=0.477 Sum_probs=43.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++++|++.| |++||+|++|||.++.++++.+++..++. ...|.|+|.|.
T Consensus 43 ~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~----~~~v~l~v~R~ 92 (101)
T 1uez_A 43 EPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG----SKKLVLSVYSA 92 (101)
T ss_dssp CTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS----SSSCCEEECCC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC----CCeEEEEEEEC
Confidence 3678888887 99999999999999999999888877765 35789999875
No 160
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.58 E-value=9.1e-08 Score=81.51 Aligned_cols=53 Identities=26% Similarity=0.496 Sum_probs=48.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.+||+|++.|+|++||+|++|||+++.++++++++++|++. ++.|.|+|.|..
T Consensus 339 ~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~---~~~v~L~v~r~~ 391 (721)
T 2xkx_A 339 LAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA---GQTVTIIAQYKP 391 (721)
T ss_pred CCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhc---CCeEEEEEEeCc
Confidence 37899999999999999999999999999999999999987 788999998863
No 161
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.57 E-value=1e-07 Score=76.39 Aligned_cols=53 Identities=32% Similarity=0.574 Sum_probs=47.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++||+|++.| |++||+|++|||.++.++++++++.+|++. +.+..|+|+|.|.
T Consensus 39 ~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~-~~g~~v~l~v~r~ 91 (391)
T 3tsz_A 39 LEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDL-PKGEEVTILAQKK 91 (391)
T ss_dssp CTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHS-CTTSEEEEEEEEC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhh-cCCCeEEEEEeeC
Confidence 4789999998 999999999999999999999999999962 1266899999985
No 162
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.57 E-value=1.3e-07 Score=63.33 Aligned_cols=53 Identities=21% Similarity=0.316 Sum_probs=44.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 54 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r 54 (114)
.++++|++.| |++||+|++|||..+...++++....+++..+.++.|.|.|+.
T Consensus 47 ~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~ 99 (101)
T 3qik_A 47 QRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVAT 99 (101)
T ss_dssp CTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEec
Confidence 3677887765 9999999999999999899999999999742247899999874
No 163
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.56 E-value=1.3e-07 Score=68.01 Aligned_cols=56 Identities=20% Similarity=0.249 Sum_probs=48.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
.|+++|++.|+|++||.|++|||.++.+++++++.++|+... .+..+.|+|.|...
T Consensus 44 ~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 44 EADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS-ITSKVTLEIEFDVA 99 (196)
T ss_dssp CTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCC-SSSEEEEEEEECSC
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CCCeEEEEEEecCC
Confidence 378899999889999999999999999999999999999761 24589999998643
No 164
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.56 E-value=1.3e-07 Score=62.72 Aligned_cols=49 Identities=33% Similarity=0.573 Sum_probs=43.4
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++.| |++||.|++|||.++.++++.+++.+++.. ..+.|+|.|.
T Consensus 50 ~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~----~~v~l~v~r~ 98 (114)
T 1x5n_A 50 PGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS----RSLTISIVAA 98 (114)
T ss_dssp TTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC----SSEEEEECSS
T ss_pred CCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC----CeEEEEEEcC
Confidence 678888877 999999999999999999998999999874 5899999875
No 165
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.54 E-value=1.8e-07 Score=61.66 Aligned_cols=48 Identities=21% Similarity=0.382 Sum_probs=41.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 54 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r 54 (114)
.++|+|++.| |++||.|++|||.++.++++++..++|++ ..++|+|..
T Consensus 43 ~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~-----~~l~ltV~~ 90 (94)
T 3kzd_A 43 KETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ-----PSLGLLVRT 90 (94)
T ss_dssp CTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS-----SEEEEEEEE
T ss_pred CCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-----CeEEEEEEe
Confidence 3678888876 99999999999999999999999999984 568888875
No 166
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.41 E-value=5.8e-07 Score=60.81 Aligned_cols=51 Identities=18% Similarity=0.303 Sum_probs=44.9
Q ss_pred CchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 3 GGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 3 gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
+++|++.| |++||.|++|||..+.++++++..++|+.. +..+.|+|.|...
T Consensus 56 ~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~---g~~v~l~v~R~g~ 106 (118)
T 2yub_A 56 ISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQT---SQTLQLLIEHDPV 106 (118)
T ss_dssp SCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCC---SSCEEEEEEECSS
T ss_pred CChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhC---CCEEEEEEEECCE
Confidence 77777765 999999999999999999999999999976 6789999998643
No 167
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.36 E-value=1.2e-06 Score=61.41 Aligned_cols=51 Identities=27% Similarity=0.409 Sum_probs=43.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 54 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r 54 (114)
.++++|++.| |++||.|++|||.++.+++++.+..+++.. .+..+.|+|.+
T Consensus 35 ~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~--~~~~v~l~vr~ 85 (166)
T 1w9e_A 35 QANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQA--FGEKITMTIRD 85 (166)
T ss_dssp CTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHC--CSSEEEEEEEC
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC--CCCEEEEEEEc
Confidence 3788888876 999999999999999999988888888876 24589999943
No 168
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.30 E-value=3.9e-07 Score=67.80 Aligned_cols=51 Identities=22% Similarity=0.304 Sum_probs=44.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcE-EEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPI-KLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V-~L~V~r~ 55 (114)
.++|+|++.| |++||+|++|||.++.++++++++.+|+.. +..| .|+|.|.
T Consensus 41 ~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~---g~~v~~l~V~R~ 92 (216)
T 2krg_A 41 DPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG---GDETKLLVVDRE 92 (216)
T ss_dssp CTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHH---CSEEEEEECCHH
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc---CCeEEEEEEEEC
Confidence 3688999888 999999999999999999999999999986 6678 8888653
No 169
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.29 E-value=8.7e-08 Score=76.44 Aligned_cols=50 Identities=22% Similarity=0.438 Sum_probs=0.0
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 54 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r 54 (114)
.++|+|++.| |++||+|++|||.++.++++++++++|++. ++.+.|+|..
T Consensus 323 ~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~---~~~v~L~V~p 372 (388)
T 3suz_A 323 MRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNS---VGEIHMKTMP 372 (388)
T ss_dssp ------------------------------------------------------
T ss_pred ecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEe
Confidence 3788999988 999999999999999999999999999987 7888998864
No 170
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.29 E-value=1.2e-06 Score=56.64 Aligned_cols=51 Identities=14% Similarity=0.243 Sum_probs=41.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++ | |++||.|++|||..+.+ .++...+|+.. +.+..+.|+|.|..
T Consensus 9 ~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~-~~g~~v~l~v~R~g 59 (91)
T 2kjp_A 9 VENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSK-KAGDKVTLKIEREE 59 (91)
T ss_dssp CCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSC-CSSCEECEEEESSS
T ss_pred CCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcC-CCCCEEEEEEEECC
Confidence 47888888 5 99999999999999986 57888888764 12668999999863
No 171
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.24 E-value=3.3e-06 Score=54.53 Aligned_cols=50 Identities=18% Similarity=0.280 Sum_probs=41.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++++|++ | |++||.|++|||..+.+ .++...+|+.. +.+..+.|+|.|.
T Consensus 13 ~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~-~~g~~v~l~v~R~ 62 (94)
T 2kl1_A 13 LPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREK-QAGDRVRVTFIRD 62 (94)
T ss_dssp CTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHS-CTTCCEEEEEEET
T ss_pred CCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhC-CCCCEEEEEEEEC
Confidence 36788887 5 99999999999999986 57788888864 1267899999986
No 172
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.17 E-value=8.4e-06 Score=51.56 Aligned_cols=49 Identities=16% Similarity=0.238 Sum_probs=40.4
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++. +|++||.|++|||..+.+ .++....|+.. .+..+.|+|.|.
T Consensus 13 ~~spA~~a-Gl~~GD~I~~ing~~v~~--~~~~~~~l~~~--~g~~v~l~v~R~ 61 (91)
T 2zpm_A 13 PNSAASXA-GLQAGDRIVXVDGQPLTQ--WVTFVMLVRDN--PGXSLALEIERQ 61 (91)
T ss_dssp TTSHHHHT-TCCTTCEEEEETTEECCC--HHHHHHHHHHC--TTCCEEEEEEET
T ss_pred CCChHHhc-CCCCCCEEEEECCeEcCC--HHHHHHHHhcC--CCCeEEEEEEEC
Confidence 57777775 599999999999999986 67888888875 356899999885
No 173
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.10 E-value=1e-05 Score=52.59 Aligned_cols=50 Identities=14% Similarity=0.236 Sum_probs=40.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
.++++|++ +|++||.|++|||..+.+ .++...+|... +.+..+.|+|.|.
T Consensus 15 ~~~spA~~--GL~~GD~I~~Ing~~v~~--~~dl~~~l~~~-~~g~~v~l~v~R~ 64 (100)
T 3i18_A 15 KDDVPAAD--VLHAGDLITEIDGNAFKS--SQEFIDYIHSK-KVGDTVKINYKHG 64 (100)
T ss_dssp CTTSGGGG--TCCTTCEEEEETTBCCSS--HHHHHHHHHTS-CTTCEEEEEEEET
T ss_pred CCCCchHH--CCCCCCEEEEECCEECCC--HHHHHHHHHhC-CCCCEEEEEEEEC
Confidence 36788884 799999999999999976 57788888764 2357899999985
No 174
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.08 E-value=1.4e-05 Score=51.74 Aligned_cols=51 Identities=20% Similarity=0.194 Sum_probs=40.3
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
++++|++. +|++||.|++|||..+.+ .++....|.... .+..+.|+|.|..
T Consensus 11 ~~spA~~a-Gl~~GD~I~~ing~~v~~--~~d~~~~l~~~~-~~~~v~l~v~R~g 61 (95)
T 3id1_A 11 ANSIAAEA-QIAPGTELKAVDGIETPD--WDAVRLQLVDKI-GDESTTITVAPFG 61 (95)
T ss_dssp TTSHHHHT-TCCTTCEEEEETTEECSS--HHHHHHHHHHTT-TCSEEEEEEECTT
T ss_pred CCCHHHHc-CCCCCCEEEEECCEECCC--HHHHHHHHHHhc-CCCcEEEEEEECC
Confidence 67777665 599999999999999986 678888887651 1257999999864
No 175
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.05 E-value=8.9e-06 Score=51.54 Aligned_cols=47 Identities=13% Similarity=0.265 Sum_probs=36.1
Q ss_pred hhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 5 AVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 5 ~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+|++ .+|++||.|++|||..+.+ .++..++++.. +.+..+.|+|.|.
T Consensus 31 ~A~~-aGl~~GD~I~~ing~~v~~--~~d~~~~~~~~-~~g~~v~l~v~R~ 77 (87)
T 2i6v_A 31 LFES-IGLQDGDMAVALNGLDLTD--PNVMNTLFQSM-NEMTEMSLTVERD 77 (87)
T ss_dssp HHHH-TTCCTTCEEEEETTEETTC--HHHHHHHHHTG-GGCSEEEEEEEET
T ss_pred HHHH-CCCCCCCEEEEECCEECCC--HHHHHHHHHhc-CCCCEEEEEEEEC
Confidence 4455 4699999999999999986 56667777654 1256899999885
No 176
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.04 E-value=9.9e-06 Score=64.14 Aligned_cols=53 Identities=21% Similarity=0.319 Sum_probs=45.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
+++++|++.| |++||.|++|||+++.+++.+++..+|+.. .+..|.|+|.|..
T Consensus 107 ~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~--~g~~v~l~v~r~g 159 (388)
T 1fc6_A 107 APGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE--ADSQVEVVLHAPG 159 (388)
T ss_dssp CTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBS--TTCEEEEEEEETT
T ss_pred CCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC--CCCEEEEEEEeCC
Confidence 4678888876 999999999999999999999999999864 3678999998863
No 177
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.02 E-value=1.8e-05 Score=52.03 Aligned_cols=47 Identities=19% Similarity=0.460 Sum_probs=39.8
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++.| |++||.|++|||..+.+ .++....|+. +..+.|+|.|.
T Consensus 44 ~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~----~~~v~l~v~R~ 90 (113)
T 2pzd_A 44 LGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT----QSQLAVQIRRG 90 (113)
T ss_dssp TTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH----CSSEEEEEEET
T ss_pred CCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC----CCeEEEEEEEC
Confidence 577888776 99999999999999985 6788888876 47899999885
No 178
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.99 E-value=2.8e-05 Score=53.21 Aligned_cols=49 Identities=18% Similarity=0.232 Sum_probs=39.4
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|+ .+|++||.|++|||..+.+ .++....|+.. +.+..+.|+|.|.
T Consensus 66 ~~spA~--aGL~~GD~I~~inG~~v~~--~~~l~~~l~~~-~~g~~v~l~v~R~ 114 (134)
T 2l97_A 66 SNMPAN--GHLEKYDVITKVDDKEIAS--STDLQSALYNH-SIGDTIKITYYRN 114 (134)
T ss_dssp TTSGGG--TTSCSSCEEEEETTEECCC--HHHHHHHHHHS-STTCEEEEEEEET
T ss_pred CCCchH--HCCCCCCEEEEECCEEcCC--HHHHHHHHHhC-CCCCEEEEEEEEC
Confidence 577777 6799999999999999987 46777777764 1267899999985
No 179
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.87 E-value=5.1e-05 Score=49.85 Aligned_cols=47 Identities=23% Similarity=0.372 Sum_probs=38.4
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++.| |++||.|++|||..+.+ .++....|+. +..+.|+|.|.
T Consensus 44 ~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~----g~~v~l~v~R~ 90 (112)
T 2p3w_A 44 PNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVLT----ESPLLLEVRRG 90 (112)
T ss_dssp TTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH----CSSEEEEEEET
T ss_pred CCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHhC----CCeEEEEEEEC
Confidence 567777765 99999999999999986 5777777753 57899999885
No 180
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.84 E-value=4.5e-05 Score=53.33 Aligned_cols=48 Identities=15% Similarity=0.268 Sum_probs=40.7
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEE
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVA 53 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~ 53 (114)
++++|++.| |++||.|++|||.++.++.++++...++.. +..+.|.+.
T Consensus 116 ~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~---g~~~~l~v~ 163 (166)
T 1w9e_A 116 KDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTS---GTVVTITIM 163 (166)
T ss_dssp TTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHS---CSEEEEEEE
T ss_pred cCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhC---CCEEEEEEE
Confidence 678888876 999999999999999999999888777765 667777765
No 181
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.78 E-value=6e-05 Score=49.28 Aligned_cols=47 Identities=13% Similarity=0.250 Sum_probs=34.6
Q ss_pred hhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 5 AVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 5 ~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+|++. +|++||.|++|||..+.+.. +..++++.. +.+..+.|+|.|.
T Consensus 49 ~A~~a-Gl~~GDvI~~ing~~v~~~~--d~~~~~~~~-~~g~~v~l~v~R~ 95 (105)
T 2i4s_A 49 LFESI-GLQDGDMAVALNGLDLTDPN--VMNTLFQSM-NEMTEMSLTVERD 95 (105)
T ss_dssp HHHHH-TCCTTCEEEEETTEETTSTT--HHHHHHHHH-TTCSEEEEEEEET
T ss_pred HHHHc-CCCCCCEEEEECCEECCCHH--HHHHHHHhc-CCCCeEEEEEEEC
Confidence 34554 59999999999999998864 444556543 1256899999885
No 182
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.70 E-value=0.00011 Score=50.03 Aligned_cols=48 Identities=17% Similarity=0.225 Sum_probs=37.6
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++. |++||.|++|||..+.+ .++....|+.. +.+..+.|+| |.
T Consensus 34 ~~spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~~-~~g~~v~l~V-R~ 81 (125)
T 2hga_A 34 PGSPASKV--LTPGLVIESINGMPTSN--LTTYSAALKTI-SVGEVINITT-DQ 81 (125)
T ss_dssp SSSGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTTC-CTTCEEEEEE-TT
T ss_pred CCChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHhc-CCCCEEEEEE-EC
Confidence 67777776 99999999999999986 56777777743 1256899999 64
No 183
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.69 E-value=7.8e-05 Score=60.00 Aligned_cols=49 Identities=29% Similarity=0.386 Sum_probs=42.1
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
++++|++.| |++||+|++|||+.+.+ .++..++|++. .+.+.|+|.|..
T Consensus 372 ~~spA~~aG-L~~GD~I~~vng~~v~~--~~~~~~~l~~~---~~~v~l~v~R~g 420 (436)
T 4a8c_A 372 KGSPAAQAG-LQKDDVIIGVNRDRVNS--IAEMRKVLAAK---PAIIALQIVRGN 420 (436)
T ss_pred CCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhC---CCeEEEEEEECC
Confidence 577888776 99999999999999975 78999999985 568999999863
No 184
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.63 E-value=0.00015 Score=55.78 Aligned_cols=52 Identities=21% Similarity=0.219 Sum_probs=41.4
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++. +|++||.|++|||+.+.+ .++...+|+.. +.+..|.|+|.|..
T Consensus 252 ~~~spA~~a-GL~~GD~I~~ing~~v~~--~~~l~~~l~~~-~~g~~v~l~v~R~g 303 (318)
T 1te0_A 252 SPDGPAANA-GIQVNDLIISVDNKPAIS--ALETMDQVAEI-RPGSVIPVVVMRDD 303 (318)
T ss_dssp CTTSTTTTT-CCCTTCCEEEETTEECCC--HHHHHHHHHTS-CTTCEEEEEEESSS
T ss_pred CCCChHHHC-CCCCCCEEEEECCEEcCC--HHHHHHHHHhc-CCCCEEEEEEEECC
Confidence 367777765 499999999999999987 57788888763 23678999999863
No 185
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.60 E-value=0.00014 Score=57.06 Aligned_cols=52 Identities=19% Similarity=0.273 Sum_probs=41.9
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |++||.|++|||..+.+ .++..+.|+.. +.+..|.|+|.|..
T Consensus 271 ~~~spA~~aG-L~~GDvI~~ing~~v~~--~~~l~~~l~~~-~~g~~v~l~v~R~g 322 (345)
T 3stj_A 271 LPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRIATT-EPGTKVKLGLLRNG 322 (345)
T ss_dssp CTTSHHHHHT-CCTTCEECEETTEECSC--HHHHHHHHHTS-CTTCEEEEEEEETT
T ss_pred ccCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhc-CCCCEEEEEEEECC
Confidence 3678888765 99999999999999985 66777888764 23678999999863
No 186
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.58 E-value=0.00013 Score=53.04 Aligned_cols=52 Identities=17% Similarity=0.305 Sum_probs=39.0
Q ss_pred CCCchhhhcCCCCCC-CEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPG-DMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~G-D~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.|+++|++.| |++| |.|++|||+.+.+.+.... .+++.. .+..+.|+|.|..
T Consensus 24 ~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~-~~~~~~--~g~~v~l~v~R~~ 76 (209)
T 3rle_A 24 QENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLK-DLLKAN--VEKPVKMLIYSSK 76 (209)
T ss_dssp CTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHH-HHHHHT--TTSCEEEEEEETT
T ss_pred CCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHH-HHHhcC--CCCEEEEEEEecC
Confidence 3678888766 9999 9999999999998764332 444443 2678999998853
No 187
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.51 E-value=0.00015 Score=58.69 Aligned_cols=48 Identities=21% Similarity=0.284 Sum_probs=41.7
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++.| |++||.|++|||..+.+ .++..++|++. +..+.|+|.|.
T Consensus 395 ~gspA~~aG-L~~GD~I~~Vng~~v~~--~~~~~~~l~~~---~~~v~l~v~R~ 442 (451)
T 3pv2_A 395 ENSAGWRAG-IRPGDIIISANKKPVTD--VKSLQTIAQEK---KKELLVQVLRG 442 (451)
T ss_dssp TTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHTTSS---CSCEEEEEEET
T ss_pred CCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhcC---CCeEEEEEEEC
Confidence 678888877 99999999999999986 57888888874 67899999886
No 188
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.51 E-value=0.00028 Score=54.24 Aligned_cols=49 Identities=22% Similarity=0.343 Sum_probs=38.8
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 54 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r 54 (114)
++++|++. +|++||.|++|||..+.+ .++...+|+.. +.+..|+|+|.|
T Consensus 251 ~~spA~~a-Gl~~GD~I~~ing~~v~~--~~~l~~~l~~~-~~g~~v~l~v~R 299 (324)
T 1y8t_A 251 AGGAAANA-GVPKGVVVTKVDDRPINS--ADALVAAVRSK-APGATVALTFQD 299 (324)
T ss_dssp TTSTTTTT-TCCTTCEEEEETTEECCS--HHHHHHHHHTS-CTTCEEEEEEEC
T ss_pred CCChHHHc-CCCCCCEEEEECCEECCC--HHHHHHHHHhc-CCCCEEEEEEEE
Confidence 67777765 599999999999999987 56677777653 236789999998
No 189
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.46 E-value=5.3e-05 Score=60.95 Aligned_cols=50 Identities=16% Similarity=0.205 Sum_probs=40.7
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
+|+|+|++.| |++||+|++|||.++.+.. ..++|++. +..|+|+|.|...
T Consensus 98 ~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~---g~~v~l~v~R~g~ 147 (403)
T 3k50_A 98 VPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGS---TRQLQIGVYKEVV 147 (403)
T ss_dssp CTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCS---CEEEEEEEEEEEC
T ss_pred CCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCC---CCEEEEEEEeCCc
Confidence 4788998877 9999999999999999875 45566653 6789999988643
No 190
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.44 E-value=0.00033 Score=56.70 Aligned_cols=52 Identities=19% Similarity=0.367 Sum_probs=41.8
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |+.||+|++|||+.+.+ .++....|... +.+..|.|+|.|..
T Consensus 290 ~~~spA~~aG-L~~GDvI~~vnG~~v~~--~~~l~~~l~~~-~~g~~v~l~V~R~g 341 (451)
T 3pv2_A 290 NPNSPAELAG-LKAGDIITQINDTKITQ--ATQVKTTISLL-RVGSTVKIIVERDN 341 (451)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHTS-CTTCEEEEEEEETT
T ss_pred CCCChHHHcC-CCCCCEEEEECCEEcCC--HHHHHHHHHhc-CCCCEEEEEEEECC
Confidence 3688888887 99999999999999987 46677777753 23678999999863
No 191
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.43 E-value=0.00017 Score=57.96 Aligned_cols=52 Identities=19% Similarity=0.303 Sum_probs=40.2
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++++|++.| |+.||+|++|||+.+.+. ++....|... +.+..|+|+|.|..
T Consensus 271 ~~~spA~~aG-L~~GD~I~~vnG~~v~~~--~~l~~~l~~~-~~g~~v~l~v~R~g 322 (436)
T 4a8c_A 271 LPGSGSAKAG-VKAGDIITSLNGKPLNSF--AELRSRIATT-EPGTKVKLGLLRNG 322 (436)
T ss_pred CCCChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhc-CCCCEEEEEEEECC
Confidence 3678888876 999999999999999874 5566666543 23578999999863
No 192
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.39 E-value=0.00038 Score=53.78 Aligned_cols=48 Identities=19% Similarity=0.439 Sum_probs=39.4
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
++++|++.| |++||.|++|||..+.+ .++..++|+. +..+.|+|.|..
T Consensus 265 ~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~----~~~v~l~v~R~g 312 (325)
T 1lcy_A 265 LGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT----QSQLAVQIRRGR 312 (325)
T ss_dssp TTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTT----CSSEEEEEEETT
T ss_pred cCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhC----CCeEEEEEEECC
Confidence 677787765 99999999999999986 5677777765 478999999863
No 193
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.24 E-value=0.0003 Score=59.09 Aligned_cols=51 Identities=12% Similarity=0.217 Sum_probs=38.1
Q ss_pred CCCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 1 MKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 1 i~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
.++|+|++.| |++||.|++|||..+... +..++|+.. +.+..|+|+|.|..
T Consensus 504 ~~~spA~~AG-L~~GD~I~aInG~~v~~~---~l~~~l~~~-~~g~~v~l~v~R~g 554 (597)
T 4fgm_A 504 YHDESAYHAG-LSAGDKIIAIDHLQATEQ---SVKRILERY-IPGDTVTIHAFRRD 554 (597)
T ss_dssp CTTSHHHHHT-CCTTCEEEEETTEECCTT---THHHHHTTC-CTTCEEEEEEEETT
T ss_pred CCCChHHHCC-CCCCCEEEEECCEECCHH---HHHHHHHhc-CCCCEEEEEEEECC
Confidence 3678888765 999999999999999543 344455542 23679999999863
No 194
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.20 E-value=0.0005 Score=59.28 Aligned_cols=48 Identities=17% Similarity=0.140 Sum_probs=41.0
Q ss_pred CchhhhcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 3 GGAVALDG-RIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 3 gG~Aa~~G-rL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
+++|++.| .|+ ||+|++|||+++.++. ++..+|++. .+..|+|+|.|.
T Consensus 766 ~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~--~g~~v~l~v~r~ 814 (1045)
T 1k32_A 766 KSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEK--AGTSARIRLSGK 814 (1045)
T ss_dssp BCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTT--TTSEEEEEEECS
T ss_pred CChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCC--CCCEEEEEEECC
Confidence 48888887 499 9999999999999876 778888875 367899999985
No 195
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.19 E-value=0.00061 Score=53.07 Aligned_cols=51 Identities=22% Similarity=0.354 Sum_probs=40.5
Q ss_pred CCchhhhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 2 KGGAVALDGRIEP-----------GDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 2 ~gG~Aa~~GrL~~-----------GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
++++|++.| |++ ||.|++|||+.+.+. ++....|... +.+..|+|+|.|..
T Consensus 260 ~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~-~~g~~v~l~v~R~g 321 (348)
T 3qo6_A 260 PSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQC-KVGDEVTVEVLRGD 321 (348)
T ss_dssp SSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTC-CTTCEEEEEEECSS
T ss_pred CCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhC-CCcCEEEEEEEECC
Confidence 678887766 888 999999999999875 6777777653 23678999999863
No 196
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=96.96 E-value=0.00064 Score=49.37 Aligned_cols=49 Identities=20% Similarity=0.446 Sum_probs=38.3
Q ss_pred CCchhhhcCCCCC-CCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 2 KGGAVALDGRIEP-GDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 2 ~gG~Aa~~GrL~~-GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
++++|++.| |++ ||.|++|||. +.+ .++..++|+.. .+..+.|+|.|..
T Consensus 121 ~~spA~~aG-l~~~GD~I~~ing~-v~~--~~~l~~~l~~~--~g~~v~l~v~r~~ 170 (209)
T 3rle_A 121 SNSPAALAG-LRPHSDYIIGADTV-MNE--SEDLFSLIETH--EAKPLKLYVYNTD 170 (209)
T ss_dssp TTSHHHHHT-CCTTTEEEEEESSC-CCS--SSCHHHHHHHT--TTSCEEEEEEETT
T ss_pred CCChHHHCC-CCCCCCEEEECCCE-eCC--HHHHHHHHHhC--CCCeEEEEEEECC
Confidence 678888876 999 9999999997 543 56677777765 3678999998863
No 197
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.82 E-value=0.00019 Score=58.17 Aligned_cols=48 Identities=27% Similarity=0.411 Sum_probs=0.0
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 55 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~ 55 (114)
++++|++.| |++||.|++|||..+.+ .++..++|++. .+.+.|+|.|.
T Consensus 392 ~gspA~~aG-L~~GDiI~~vng~~v~~--~~~l~~~l~~~---~~~v~l~v~R~ 439 (448)
T 1ky9_A 392 TGTPAAQIG-LKKGDVIIGANQQAVKN--IAELRKVLDSK---PSVLALNIQRG 439 (448)
T ss_dssp ------------------------------------------------------
T ss_pred CCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHcC---CCeEEEEEEEC
Confidence 567777766 99999999999999985 67888888875 45889999886
No 198
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=96.81 E-value=0.00019 Score=55.47 Aligned_cols=48 Identities=15% Similarity=0.342 Sum_probs=0.0
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
++++|++.| |++||.|++|||+.+.+ .++...+|+. +..|+|+|.|..
T Consensus 263 ~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~----~~~v~l~v~R~g 310 (332)
T 3num_A 263 PDTPAEAGG-LKENDVIISINGQSVVS--ANDVSDVIKR----ESTLNMVVRRGN 310 (332)
T ss_dssp -------------------------------------------------------
T ss_pred cCCChHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC----CCeEEEEEEECC
Confidence 567776654 99999999999999965 4566666664 567999999863
No 199
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.79 E-value=0.0009 Score=54.12 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=39.3
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEEEecC
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKCW 56 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V~r~~ 56 (114)
++++|++ .+|++||.|++|||..+.+. ++...+|... +.+..|.|+|.|..
T Consensus 295 ~gspA~~-AGL~~GDvI~~inG~~v~~~--~~l~~~l~~~-~~g~~v~l~v~R~g 345 (448)
T 1ky9_A 295 PNSSAAK-AGIKAGDVITSLNGKPISSF--AALRAQVGTM-PVGSKLTLGLLRDG 345 (448)
T ss_dssp TCSSSTT-TTCCTTCEECBSSSSBCCSS--HHHHHHTTSS-BTTCCCEEEEESSS
T ss_pred cCCHHHH-cCCCCCCEEEEECCEEcCCH--HHHHHHHHhc-CCCCEEEEEEEECC
Confidence 6777777 46999999999999999886 4566666642 23678999998863
No 200
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=94.97 E-value=0.028 Score=46.77 Aligned_cols=53 Identities=8% Similarity=0.100 Sum_probs=36.7
Q ss_pred CCchhhhcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhccCCCCcEEEEEEecCC
Q psy1030 2 KGGAVALDGRIEPGDMILQVNDINFENMSN--------DEAVRVLREVVQKPGPIKLVVAKCWD 57 (114)
Q Consensus 2 ~gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~--------~eAv~~Lr~~~~~~~~V~L~V~r~~~ 57 (114)
|+|+|++ + |+.||.|++|||+.+.+... ..-..++... +.+..|+|+|.|...
T Consensus 286 ~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~-~~Gd~v~l~v~R~Gk 346 (539)
T 4fln_A 286 PTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQK-FAGDIAEIGIIRAGE 346 (539)
T ss_dssp TTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTS-CTTCEEEEEEEETTE
T ss_pred CCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcC-CCCCEEEEEEEECCE
Confidence 6788875 4 99999999999999965321 0122334332 347799999998643
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=91.30 E-value=0.43 Score=39.66 Aligned_cols=45 Identities=11% Similarity=0.022 Sum_probs=33.0
Q ss_pred CchhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCCCCcEEEEE
Q psy1030 3 GGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVV 52 (114)
Q Consensus 3 gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~~~~V~L~V 52 (114)
+++++. .+++.||.|++|||+.+.+ .++-.++|+++ +.+.+.|..
T Consensus 425 ~s~a~~-~g~~~gdiI~~vNg~~V~s--~~~l~~~l~~~--k~~~l~~~~ 469 (539)
T 4fln_A 425 NEVNIG-YEDMNNQQVLKFNGIPIRN--IHHLAHLIDMC--KDKYLVFEF 469 (539)
T ss_dssp CGGGTT-CSSCCSEEEEEETTEECCS--HHHHHHHHHTC--CSSEEEEEE
T ss_pred Cchhhh-cCCCCCCEEEeECCEEcCC--HHHHHHHHHHc--CCCeEEEEE
Confidence 344444 4589999999999999998 56788899887 344455544
No 202
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=55.92 E-value=11 Score=25.84 Aligned_cols=33 Identities=12% Similarity=0.281 Sum_probs=24.8
Q ss_pred chhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 4 GAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 4 G~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
.+..-..++++|..|++|.| .+.+.|.++|+.+
T Consensus 89 ~~~~wva~Vk~G~ilfEi~g-----v~~~~A~eAlr~a 121 (135)
T 3bbo_O 89 SPEYWVAVVKPGRILYEISG-----VAENIARRAVAIA 121 (135)
T ss_dssp CSSCCCCCCCTTCEEEEECS-----SCTTHHHHHHHHH
T ss_pred CceEEEEEECCCCEEEEEec-----CCHHHHHHHHHHH
Confidence 34445567999999999998 3456788888766
No 203
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=48.22 E-value=23 Score=25.97 Aligned_cols=33 Identities=30% Similarity=0.420 Sum_probs=30.5
Q ss_pred cCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 9 DGRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 9 ~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
.|.+..|+.++-|+++--++-|..+++++|++.
T Consensus 131 ~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~ 163 (234)
T 3m3h_A 131 EGKAEKGQKVVVVEDLISTGGSAITCVEALREA 163 (234)
T ss_dssp ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred ecccCCCCEEEEEecccchhHHHHHHHHHHHHC
Confidence 456788999999999999999999999999997
No 204
>2ftc_I Mitochondrial ribosomal protein L16, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_I
Probab=48.02 E-value=13 Score=24.76 Aligned_cols=32 Identities=13% Similarity=0.242 Sum_probs=25.4
Q ss_pred hhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 6 VALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 6 Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
..--.++++|..|++|.| + .+.+.|.+.|+.+
T Consensus 78 ~~wva~Vk~G~ilfEi~g-~---~~~~~a~eAlr~a 109 (118)
T 2ftc_I 78 DHYVTPVKAGRLVVEMGG-R---CEFEEVQGFLDQV 109 (118)
T ss_pred cEEEEEECCCCEEEEEec-c---CCHHHHHHHHHHH
Confidence 334456899999999988 2 5678899999876
No 205
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=46.41 E-value=25 Score=25.93 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=30.4
Q ss_pred cCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 9 DGRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 9 ~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
.|.+..|+.++-|+++--++-|..+++++|+++
T Consensus 143 eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~ 175 (243)
T 3dez_A 143 EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQRE 175 (243)
T ss_dssp ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred EeccCCCCEEEEEEeeccccHHHHHHHHHHHHC
Confidence 456788999999999999999999999999987
No 206
>1ffk_F Ribosomal protein L10E; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1jj2_H 1k73_J* 1k8a_J* 1k9m_J* 1kc8_J* 1kd1_J* 1kqs_H* 1m1k_J* 1m90_J* 1n8r_J* 1nji_J* 1q7y_J* 1q81_J* 1q82_J* 1q86_J* 1qvf_H 1qvg_H 1w2b_H 3cxc_H* 1giy_P ...
Probab=46.25 E-value=15 Score=25.84 Aligned_cols=42 Identities=7% Similarity=-0.058 Sum_probs=28.2
Q ss_pred hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCC-CCcEEEEEEe
Q psy1030 8 LDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK-PGPIKLVVAK 54 (114)
Q Consensus 8 ~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~-~~~V~L~V~r 54 (114)
--.++++|..|++|.|++ .+.|.+.|+.+..+ +...++++.+
T Consensus 111 wvArVk~G~ilfei~gv~-----~~~A~eAlr~A~~KlP~ktkiv~~~ 153 (157)
T 1ffk_F 111 TAARSHGANHDFIAWVNP-----DPAVEFAWRRAYMKVTPTVNIDSSP 153 (157)
T ss_pred EEEEEcCCCEEEEEeccC-----HHHHHHHHHHHHhhCCCcEEEEEec
Confidence 345689999999998865 34788888866332 3445555543
No 207
>2pa2_A 60S ribosomal protein L10; QM protein, , structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Homo sapiens} SCOP: d.41.4.1
Probab=43.94 E-value=13 Score=25.93 Aligned_cols=44 Identities=25% Similarity=0.533 Sum_probs=31.2
Q ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCC-CCcEEEEEEecC
Q psy1030 10 GRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK-PGPIKLVVAKCW 56 (114)
Q Consensus 10 GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~-~~~V~L~V~r~~ 56 (114)
.++++|..|+++.+.. .+.+.|.+.|+.+..+ +...++++.+.|
T Consensus 96 ArVk~G~ilfei~~~~---v~~~~A~eAlr~A~~KlP~ktkiv~~~~~ 140 (151)
T 2pa2_A 96 ARVHIGQVIMSIRTKL---QNKEHVIEALRRAKFKFPGRQKIHISKKW 140 (151)
T ss_dssp EEECTTBEEEEEEECG---GGHHHHHHHHHHHGGGSSSCEEEEEESCC
T ss_pred EEECCCCEEEEEECCC---CCHHHHHHHHHHHHhhCCCcEEEEEeccC
Confidence 4689999999997733 4577888888866433 556677766544
No 208
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=38.12 E-value=40 Score=24.31 Aligned_cols=32 Identities=13% Similarity=0.278 Sum_probs=29.2
Q ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 10 GRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 10 GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
+.+..|+.++-|+++--+|-|..+|+++|++.
T Consensus 133 ~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~ 164 (236)
T 1qb7_A 133 GSIGKGSRVVLIDDVLATGGTALSGLQLVEAS 164 (236)
T ss_dssp TSSCTTCEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred CCCCCcCEEEEEecccccHHHHHHHHHHHHHc
Confidence 44568999999999999999999999999987
No 209
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=37.82 E-value=26 Score=24.68 Aligned_cols=33 Identities=33% Similarity=0.507 Sum_probs=29.7
Q ss_pred cCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 9 DGRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 9 ~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
.|.+..|..++-|+++-.+|.|..++++.|++.
T Consensus 105 ~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~ 137 (205)
T 2wns_A 105 EGTINPGETCLIIEDVVTSGSSVLETVEVLQKE 137 (205)
T ss_dssp ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHC
Confidence 355678999999999999999999999999987
No 210
>3r8s_M 50S ribosomal protein L16; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_K 1p86_K 1vs8_M 1vs6_M 2aw4_M 2awb_M 1vt2_M 2i2v_M 2j28_M 2i2t_M* 2qao_M* 2qba_M* 2qbc_M* 2qbe_M 2qbg_M 2qbi_M* 2qbk_M* 2qov_M 2qox_M 2qoz_M* ...
Probab=37.76 E-value=12 Score=25.62 Aligned_cols=31 Identities=13% Similarity=0.348 Sum_probs=25.1
Q ss_pred hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Q psy1030 8 LDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 43 (114)
Q Consensus 8 ~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~ 43 (114)
-..++++|..|+++.|+ +.+.|.++|+.+..
T Consensus 92 wva~Vk~G~ilfEi~g~-----~~~~A~eAlr~a~~ 122 (136)
T 3r8s_M 92 WVALIQPGKVLYEMDGV-----PEELAREAFKLAAA 122 (136)
T ss_dssp EEEEECTTCEEEEEESS-----CHHHHHHHHHHHHT
T ss_pred EEEEECCCCEEEEEeCC-----CHHHHHHHHHHHHh
Confidence 34578999999999883 68899999998743
No 211
>1vq8_H 50S ribosomal protein L10E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1vq4_H* 1vq5_H* 1vq6_H* 1vq7_H* 1s72_H* 1vq9_H* 1vqk_H* 1vql_H* 1vqm_H* 1vqn_H* 1vqo_H* 1vqp_H* 2otj_H* 2otl_H* 2qa4_H* 2qex_H* 1yhq_H* 1yi2_H* 1yij_H* 1yit_H* ...
Probab=36.68 E-value=27 Score=24.86 Aligned_cols=42 Identities=10% Similarity=0.222 Sum_probs=29.4
Q ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCC-CCcEEEEEEe
Q psy1030 10 GRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK-PGPIKLVVAK 54 (114)
Q Consensus 10 GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~-~~~V~L~V~r 54 (114)
.++++|..|++|.+ ...+.+.|.+.|+.+..+ +...++++.+
T Consensus 125 ArVk~G~ilfei~~---~~v~~~~A~eAlr~A~~KLP~ktkiv~~~ 167 (171)
T 1vq8_H 125 ARVQAGEQLFTAYC---NVEDAEHVKEAFRRAYNKITPSCRIDSSP 167 (171)
T ss_dssp EEECTTCEEEEEEE---CTTTHHHHHHHHHHHGGGSSSCEEEEECS
T ss_pred EEECCCCEEEEEEC---cCCCHHHHHHHHHHHHhhCCCcEEEEEec
Confidence 46889999999977 335678899999876432 4455665543
No 212
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=35.12 E-value=42 Score=24.49 Aligned_cols=32 Identities=16% Similarity=0.193 Sum_probs=28.8
Q ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 10 GRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 10 GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
|....|+.++-|+++--++-|..+++++|++.
T Consensus 131 g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~ 162 (232)
T 3mjd_A 131 GADMTNKKVLLIDDVMTAGTAFYESYNKLKII 162 (232)
T ss_dssp ESCCTTCEEEEECSCCSSSHHHHHHHHHHHTT
T ss_pred ccCCCCCEEEEEEeeccccHHHHHHHHHHHHC
Confidence 33457999999999999999999999999987
No 213
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=34.38 E-value=72 Score=20.72 Aligned_cols=29 Identities=7% Similarity=0.182 Sum_probs=26.5
Q ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 13 EPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 13 ~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
..|..++-|+++--+|-|...+.+.|++.
T Consensus 81 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~ 109 (153)
T 1vdm_A 81 LKDKRVVIVDDVSDTGKTLEVVIEEVKKL 109 (153)
T ss_dssp CBTCEEEEEEEEESSCHHHHHHHHHHHTT
T ss_pred CCCCEEEEEecccCChHHHHHHHHHHHHc
Confidence 45888999999999999999999999986
No 214
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=33.68 E-value=52 Score=22.59 Aligned_cols=30 Identities=30% Similarity=0.584 Sum_probs=27.9
Q ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 12 IEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 12 L~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
+..|..++-|+++--++.|..++.++|+++
T Consensus 123 ~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~ 152 (190)
T 2dy0_A 123 IKPGDKVLVVDDLLATGGTIEATVKLIRRL 152 (190)
T ss_dssp CCTTCEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred cCCcCEEEEEEccccchHHHHHHHHHHHHc
Confidence 557999999999999999999999999987
No 215
>2zkr_h 60S ribosomal protein L10; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=33.18 E-value=25 Score=25.97 Aligned_cols=44 Identities=23% Similarity=0.543 Sum_probs=30.6
Q ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCC-CCcEEEEEEecC
Q psy1030 10 GRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK-PGPIKLVVAKCW 56 (114)
Q Consensus 10 GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~-~~~V~L~V~r~~ 56 (114)
.++++|..|++|.+ ...+.+.|.+.|+.+..+ +...++++.+.|
T Consensus 127 ArVkpGqilfEi~~---~~v~~~~A~eALr~A~~KLP~ktkiv~~~~~ 171 (214)
T 2zkr_h 127 AKVHIGQVIMSIRT---KLQNKEHVIEALRRAKFKFPGRQKIHISKKW 171 (214)
T ss_dssp EEECTTCEEEEEEE---CSTTHHHHHHHHHHHHHTSSSCEEEEECC--
T ss_pred EEECCCCEEEEEeC---CCCCHHHHHHHHHHHHhhCCCcEEEEEeccC
Confidence 46889999999977 335678888888866432 456777776644
No 216
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=33.11 E-value=58 Score=22.27 Aligned_cols=31 Identities=23% Similarity=0.289 Sum_probs=28.2
Q ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 11 RIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 11 rL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
.+..|..++-|+++-.+|.|..++.+.|++.
T Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~ 148 (187)
T 1g2q_A 118 AIPAGSNVIIVDDIIATGGSAAAAGELVEQL 148 (187)
T ss_dssp SSCTTCEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred cCCCcCEEEEECCCcccHHHHHHHHHHHHHc
Confidence 3567899999999999999999999999987
No 217
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=32.98 E-value=58 Score=21.99 Aligned_cols=30 Identities=23% Similarity=0.436 Sum_probs=27.6
Q ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 12 IEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 12 L~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
+..|..++-|+++--+|.|..++.+.|++.
T Consensus 117 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ 146 (180)
T 1zn8_A 117 LEPGQRVVVVDDLLATGGTMNAACELLGRL 146 (180)
T ss_dssp SCTTCEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCcccHHHHHHHHHHHHHc
Confidence 457889999999999999999999999987
No 218
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=32.52 E-value=51 Score=22.59 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=27.5
Q ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 12 IEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 12 L~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
+..|..++=|+++--+|.|..+|.+.|+++
T Consensus 114 ~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~ 143 (186)
T 1l1q_A 114 LGPHDVVLLHDDVLATGGTLLAAIELCETA 143 (186)
T ss_dssp CCTTCCEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred CCCcCEEEEEecccccHHHHHHHHHHHHHc
Confidence 457888999999999999999999999987
No 219
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=31.31 E-value=92 Score=24.92 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=29.3
Q ss_pred cCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 9 DGRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 9 ~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
.|.+..|+.++-|+++--++-|..+++++|++.
T Consensus 359 ~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~ 391 (453)
T 3qw4_B 359 EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSA 391 (453)
T ss_dssp ESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTT
T ss_pred ecccCCCCEEEEEeeeechhHHHHHHHHHHHHc
Confidence 356788999999999999999999999999987
No 220
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=30.92 E-value=42 Score=25.20 Aligned_cols=31 Identities=16% Similarity=0.304 Sum_probs=28.7
Q ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 11 RIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 11 rL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
.+..|+.++-|+++--+|.|..+++++|+++
T Consensus 192 ~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~a 222 (291)
T 1o57_A 192 SMKTGSNVLIIDDFMKAGGTINGMINLLDEF 222 (291)
T ss_dssp GSCTTCEEEEEEEEESSSHHHHHHHHHTGGG
T ss_pred cCCCcCEEEEEEEEcCcHHHHHHHHHHHHHC
Confidence 3568999999999999999999999999987
No 221
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=30.27 E-value=64 Score=22.11 Aligned_cols=30 Identities=13% Similarity=0.309 Sum_probs=27.7
Q ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 12 IEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 12 L~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
+..|..++=|+++--+|.|..+|.++|+++
T Consensus 117 ~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ 146 (197)
T 1y0b_A 117 LSDQDHVLIIDDFLANGQAAHGLVSIVKQA 146 (197)
T ss_dssp CCTTCEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred cCCcCEEEEEEcccccCHHHHHHHHHHHHC
Confidence 457899999999999999999999999987
No 222
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=28.75 E-value=58 Score=23.16 Aligned_cols=29 Identities=17% Similarity=0.280 Sum_probs=27.3
Q ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 13 EPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 13 ~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
..|+.++-|+++-.++-|..+++++|++.
T Consensus 123 i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~ 151 (226)
T 2ps1_A 123 LENKRILIIDDVMTAGTAINEAFEIISNA 151 (226)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred CCcCEEEEEEecccChHHHHHHHHHHHHc
Confidence 47999999999999999999999999987
No 223
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=28.73 E-value=62 Score=21.62 Aligned_cols=28 Identities=7% Similarity=0.093 Sum_probs=26.3
Q ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 14 PGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 14 ~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
.|..++-|+++--+|.|..++.+.|++.
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~ 146 (175)
T 1vch_A 119 LNQRVVLVSDVVASGETMRAMEKMVLRA 146 (175)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred CCCEEEEEeccccchHHHHHHHHHHHHc
Confidence 6888999999999999999999999987
No 224
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=28.23 E-value=29 Score=29.19 Aligned_cols=18 Identities=28% Similarity=0.534 Sum_probs=15.6
Q ss_pred CCCCCCEEEEECCEECCC
Q psy1030 11 RIEPGDMILQVNDINFEN 28 (114)
Q Consensus 11 rL~~GD~Il~VNg~~l~~ 28 (114)
.+.+||.|++|||+++..
T Consensus 109 ~I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 109 EIRVGDELLEVDGAPVQD 126 (583)
T ss_dssp SSCTTCEEEEETTEEHHH
T ss_pred CCCCCCEEEEECCccHHH
Confidence 588999999999999643
No 225
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=27.66 E-value=77 Score=21.52 Aligned_cols=31 Identities=26% Similarity=0.406 Sum_probs=27.9
Q ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 10 GRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 10 GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
+.+ .|..++-|+++--++.|..++.+.|++.
T Consensus 102 ~~~-~gk~VllVDDvitTG~Tl~~~~~~L~~~ 132 (178)
T 2yzk_A 102 GDP-PKGRVVVVDDVATTGTSIAKSIEVLRSN 132 (178)
T ss_dssp TCC-CSSEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred ccC-CCCEEEEEEeccCCcHHHHHHHHHHHHc
Confidence 345 7889999999999999999999999987
No 226
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=26.12 E-value=98 Score=21.74 Aligned_cols=30 Identities=13% Similarity=0.263 Sum_probs=27.0
Q ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 11 RIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 11 rL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
....| .++-|+++--++-|..++++.|++.
T Consensus 114 ~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~ 143 (213)
T 1lh0_A 114 SALQG-RVMLVDDVITAGTAIRESMEIIQAH 143 (213)
T ss_dssp SCCCS-EEEEECSCCSSSCHHHHHHHHHHHT
T ss_pred CCCCC-CEEEEEecccchHHHHHHHHHHHHC
Confidence 34578 9999999999999999999999987
No 227
>2zjr_J 50S ribosomal protein L16; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.41.4.2 PDB: 1sm1_K* 2zjp_J* 2zjq_J 1nkw_K 3cf5_J* 3dll_J* 3pio_J* 1njm_K* 1nwx_K* 1njp_K* 1xbp_K* 1y69_K 1nwy_K* 3pip_J* 1pnu_K 1pny_K 1vor_N 1vou_N 1vow_N 1voy_N ...
Probab=25.83 E-value=11 Score=25.91 Aligned_cols=44 Identities=20% Similarity=0.311 Sum_probs=27.3
Q ss_pred chhhhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccCC-CCcEEEEE
Q psy1030 4 GAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK-PGPIKLVV 52 (114)
Q Consensus 4 G~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~~-~~~V~L~V 52 (114)
.+..-..++++|..|++|.|++. +.|.++|+.+..+ +....+++
T Consensus 90 ~~~~wva~Vk~G~ilfEi~gv~~-----~~A~eAlr~A~~KLP~~~kiv~ 134 (142)
T 2zjr_J 90 AVEYWVSVVKPGRVMFEVAGVTE-----EQAKEAFRLAGHKLPIQTKMVK 134 (142)
T ss_dssp TTSEEBCCBCTTEEEECCCSSCS-----TTTTTHHHHHHHTCSSCEEEEC
T ss_pred CCCEEEEEECCCCEEEEEeCCCH-----HHHHHHHHHHHhhCCCcEEEEE
Confidence 34445567999999999999443 4466666655322 34444443
No 228
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=25.04 E-value=36 Score=22.04 Aligned_cols=27 Identities=33% Similarity=0.582 Sum_probs=17.3
Q ss_pred CchhhhcCCCCCCCEEEEECCEECCCCCHHHH
Q psy1030 3 GGAVALDGRIEPGDMILQVNDINFENMSNDEA 34 (114)
Q Consensus 3 gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eA 34 (114)
+|+|++ ..++||.++-+.= ..++.+|+
T Consensus 48 NGAAAr--l~~~GD~vII~aY---~~~~~~e~ 74 (96)
T 1vc3_B 48 NGAAAH--LVKPGDLVILVAY---GVFDEEEA 74 (96)
T ss_dssp EGGGGG--TCCTTCEEEEEEE---EEECHHHH
T ss_pred chHHHc--cCCCCCEEEEEEC---ccCCHHHH
Confidence 477887 4688999986533 34445554
No 229
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=24.24 E-value=1e+02 Score=21.42 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=28.7
Q ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 10 GRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 10 GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
|....|..++-|+++--++-|..++++.|++.
T Consensus 112 g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~ 143 (211)
T 2aee_A 112 GRVLKGQKMVIIEDLISTGGSVLDAAAAASRE 143 (211)
T ss_dssp SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred CCCCCcCEEEEEeecccchHHHHHHHHHHHHC
Confidence 34567889999999999999999999999987
No 230
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=23.78 E-value=81 Score=21.50 Aligned_cols=32 Identities=34% Similarity=0.340 Sum_probs=28.8
Q ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 10 GRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 10 GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
|....|..++-|+++--++-|..++.+.|++.
T Consensus 109 g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ 140 (180)
T 2p1z_A 109 GPDVVGKKVLVVEDTTTTGNSPLTAVKALREA 140 (180)
T ss_dssp SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHH
T ss_pred CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHc
Confidence 44567899999999999999999999999987
No 231
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=23.40 E-value=87 Score=21.34 Aligned_cols=29 Identities=21% Similarity=0.082 Sum_probs=26.4
Q ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 13 EPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 13 ~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
..|..++-|+++--++.|...|++.|++.
T Consensus 96 ~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ 124 (185)
T 2geb_A 96 IEGKDVLIVEDIIDSGLTLAYLRETLLGR 124 (185)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCccCCHHHHHHHHHHHHhc
Confidence 35788899999999999999999999986
No 232
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=23.26 E-value=35 Score=22.13 Aligned_cols=27 Identities=30% Similarity=0.602 Sum_probs=17.9
Q ss_pred CchhhhcCCCCCCCEEEEECCEECCCCCHHHH
Q psy1030 3 GGAVALDGRIEPGDMILQVNDINFENMSNDEA 34 (114)
Q Consensus 3 gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eA 34 (114)
+|+|++- .++||.++-+. ...++.+|+
T Consensus 46 NGAAArl--~~~GD~vII~a---Y~~~~~~e~ 72 (97)
T 1uhe_A 46 NGAAARK--VAIGDVVIILA---YASMNEDEI 72 (97)
T ss_dssp EGGGGGG--CCTTCEEEEEE---EEEECHHHH
T ss_pred chHHHcc--CCCCCEEEEEE---CccCCHHHH
Confidence 4788884 68899998653 344455555
No 233
>3vnn_A DNA ligase 4; non-homologous END joining, DNA repair, XRCC4; HET: DNA; 2.90A {Homo sapiens}
Probab=22.65 E-value=98 Score=20.42 Aligned_cols=25 Identities=16% Similarity=0.308 Sum_probs=22.3
Q ss_pred EEEECCEECCCCCHHHHHHHHHhcc
Q psy1030 18 ILQVNDINFENMSNDEAVRVLREVV 42 (114)
Q Consensus 18 Il~VNg~~l~~~s~~eAv~~Lr~~~ 42 (114)
||..||.++.+.+..+-.++|++..
T Consensus 102 lL~l~G~~L~~~pl~eRr~~L~~l~ 126 (139)
T 3vnn_A 102 VLMVNNKKLGHETLRKRYEILSSIF 126 (139)
T ss_dssp EEEETTEECSSSCHHHHHHHHHHHC
T ss_pred EEeECCcCcccCCHHHHHHHHHHHh
Confidence 4679999999999999999999874
No 234
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=22.57 E-value=36 Score=22.24 Aligned_cols=28 Identities=29% Similarity=0.393 Sum_probs=18.0
Q ss_pred CchhhhcCCCCCCCEEEEECCEECCCCCHHHHH
Q psy1030 3 GGAVALDGRIEPGDMILQVNDINFENMSNDEAV 35 (114)
Q Consensus 3 gG~Aa~~GrL~~GD~Il~VNg~~l~~~s~~eAv 35 (114)
+|+||+- .++||.++-+.= ..++.+|+.
T Consensus 47 NGAAArl--~~~GD~vII~aY---~~~~~~e~~ 74 (102)
T 3plx_B 47 NGAAARL--AEVGDKVIIMSY---ADFNEEEAK 74 (102)
T ss_dssp EGGGGGG--CCTTCEEEEEEE---EEEEHHHHH
T ss_pred CcHHHhc--cCCCCEEEEEEc---ccCCHHHHh
Confidence 4788884 689999986532 344455553
No 235
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=22.50 E-value=90 Score=22.87 Aligned_cols=31 Identities=16% Similarity=0.292 Sum_probs=27.8
Q ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 10 GRIEPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 10 GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
|....| +++-|+++--++-|..+++++|+++
T Consensus 138 G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~ 168 (238)
T 3n2l_A 138 GSKLEG-RVMLVDDVITAGTAIRESMELIQAN 168 (238)
T ss_dssp ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHT
T ss_pred ccccCC-cEEEEeeeecccHHHHHHHHHHHHc
Confidence 345578 9999999999999999999999997
No 236
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=22.31 E-value=75 Score=18.13 Aligned_cols=17 Identities=12% Similarity=0.106 Sum_probs=15.6
Q ss_pred ECCCCCHHHHHHHHHhc
Q psy1030 25 NFENMSNDEAVRVLREV 41 (114)
Q Consensus 25 ~l~~~s~~eAv~~Lr~~ 41 (114)
++.+++.++|.+.|+++
T Consensus 12 dv~G~~~~~A~~~L~~~ 28 (71)
T 3ouv_A 12 DVAGQTVDVAQKNMNVY 28 (71)
T ss_dssp CCTTCBHHHHHHHHHHT
T ss_pred CcCCCCHHHHHHHHHHC
Confidence 57899999999999987
No 237
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=21.98 E-value=94 Score=21.53 Aligned_cols=29 Identities=21% Similarity=0.082 Sum_probs=26.5
Q ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 13 EPGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 13 ~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
..|..++-|+++--++.|...|++.|++.
T Consensus 116 ~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ 144 (205)
T 1yfz_A 116 IEGKDVLIVEDIIDSGLTLAYLRETLLGR 144 (205)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHTT
T ss_pred CCcCEEEEECCccCcHHHHHHHHHHHHhc
Confidence 35888999999999999999999999986
No 238
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=21.06 E-value=99 Score=22.03 Aligned_cols=28 Identities=18% Similarity=0.141 Sum_probs=25.9
Q ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 14 PGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 14 ~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
.|..++-|+++--+|.|...+++.|++.
T Consensus 102 ~Gk~VLLVDDii~TG~Tl~~a~~~L~~~ 129 (220)
T 1tc1_A 102 EGHHVLIVEDIVDTALTLNYLYHMYFTR 129 (220)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTT
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhc
Confidence 5788889999999999999999999986
No 239
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=20.75 E-value=94 Score=20.94 Aligned_cols=28 Identities=21% Similarity=0.427 Sum_probs=26.0
Q ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 14 PGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 14 ~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
.|..++-|+++--+|.|..++.+.|++.
T Consensus 95 ~gk~VllVDDvitTG~Tl~~a~~~L~~~ 122 (181)
T 1ufr_A 95 TGKAIVLVDDVLYTGRTARAALDALIDL 122 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcHHHHHHHHHHHHhc
Confidence 5788889999999999999999999987
No 240
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=20.51 E-value=1.1e+02 Score=21.55 Aligned_cols=28 Identities=18% Similarity=0.157 Sum_probs=26.1
Q ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhc
Q psy1030 14 PGDMILQVNDINFENMSNDEAVRVLREV 41 (114)
Q Consensus 14 ~GD~Il~VNg~~l~~~s~~eAv~~Lr~~ 41 (114)
.|..++-|+++--+|.|...|++.|++.
T Consensus 117 ~gk~VllVDDvi~TG~Tl~aa~~~L~~~ 144 (211)
T 1pzm_A 117 ENRHIMLVEDIVDSAITLQYLMRFMLAK 144 (211)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHTT
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHhc
Confidence 5788899999999999999999999987
No 241
>4a17_H RPL10, 60S ribosomal protein L10; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_H 4a1c_H 4a1e_H
Probab=20.20 E-value=29 Score=25.57 Aligned_cols=45 Identities=22% Similarity=0.400 Sum_probs=32.3
Q ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC-CCCcEEEEEEecCC
Q psy1030 10 GRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ-KPGPIKLVVAKCWD 57 (114)
Q Consensus 10 GrL~~GD~Il~VNg~~l~~~s~~eAv~~Lr~~~~-~~~~V~L~V~r~~~ 57 (114)
.++++|..|++|.+++ ..-+.|.+.|+.+.. =+...++.+.+.|.
T Consensus 127 ArVk~Gqilfei~g~~---~~~~~A~eALr~A~~KlP~~tkiv~~~kwg 172 (215)
T 4a17_H 127 ARVDIGSILFSVRVKE---PHVKYAIDALTRAKAKFPGRQKVVTSQKWG 172 (215)
T ss_dssp EEECTTCEEEEEEECG---GGHHHHHHHHHHHGGGSSSCEEEEEESBCT
T ss_pred EEEcCCCEEEEEEecC---CCHHHHHHHHHHHhhhCCCceEEEEccccC
Confidence 4678999999998854 345678888876532 25677888887765
No 242
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=20.15 E-value=69 Score=23.48 Aligned_cols=22 Identities=27% Similarity=0.548 Sum_probs=18.6
Q ss_pred hhcCCCCCCCEEEEECCEECCCC
Q psy1030 7 ALDGRIEPGDMILQVNDINFENM 29 (114)
Q Consensus 7 a~~GrL~~GD~Il~VNg~~l~~~ 29 (114)
.+|| +.+|..++++||.++.+-
T Consensus 53 ~~d~-~~~~~~~~~~ng~~~~~~ 74 (219)
T 2j3t_D 53 QRDG-IRVGHAVLAINGMDVNGR 74 (219)
T ss_dssp CCTT-CCTTCEEEEETTEECBTT
T ss_pred ccCC-ccccceeeecCCccCCCc
Confidence 4554 899999999999999875
Done!