Query psy1031
Match_columns 456
No_of_seqs 480 out of 2452
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 23:14:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fu0_A Cyclophilin, putative; 100.0 4.8E-40 1.6E-44 292.8 16.4 104 351-454 57-160 (160)
2 2ok3_A Peptidyl-prolyl CIS-tra 100.0 8.1E-40 2.8E-44 292.0 16.6 105 351-455 52-157 (161)
3 2x7k_A Peptidyl-prolyl CIS-tra 100.0 1.5E-39 5.2E-44 291.3 16.7 103 351-453 63-165 (166)
4 1zkc_A Peptidyl-prolyl CIS-tra 100.0 1.9E-39 6.7E-44 296.8 17.8 105 351-455 71-176 (197)
5 2poe_A Cyclophilin-like protei 100.0 1.7E-39 5.9E-44 295.5 16.4 104 352-455 69-176 (185)
6 2b71_A Cyclophilin-like protei 100.0 2.5E-39 8.5E-44 296.2 15.8 104 352-455 91-194 (196)
7 2a2n_A Peptidylprolyl isomeras 100.0 5.5E-39 1.9E-43 289.8 16.1 102 351-452 73-175 (176)
8 3bo7_A Peptidyl-prolyl CIS-tra 100.0 7.2E-39 2.4E-43 295.6 16.5 89 367-455 86-174 (201)
9 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.5E-38 5.2E-43 287.7 16.0 102 351-453 75-177 (177)
10 2wfi_A Peptidyl-prolyl CIS-tra 100.0 2.5E-38 8.5E-43 286.8 17.1 119 330-453 60-179 (179)
11 1a58_A Cyclophilin; isomerase, 100.0 3.5E-38 1.2E-42 285.5 17.6 118 332-454 59-177 (177)
12 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.7E-38 5.7E-43 291.7 15.4 104 352-455 64-167 (203)
13 2he9_A NK-tumor recognition pr 100.0 4.5E-38 1.6E-42 287.5 17.1 121 330-455 70-191 (192)
14 2haq_A Cyclophilin; rotamase, 100.0 3.9E-38 1.3E-42 283.0 15.6 95 357-453 78-172 (172)
15 2igv_A Peptidyl-prolyl CIS-tra 100.0 6.7E-38 2.3E-42 282.7 17.0 118 332-455 55-173 (173)
16 1qng_A Peptidyl-prolyl CIS-tra 100.0 6.9E-38 2.4E-42 281.8 16.5 101 351-453 69-170 (170)
17 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.6E-37 5.4E-42 279.5 17.3 96 357-454 77-172 (172)
18 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.8E-37 6.1E-42 277.8 17.0 96 357-454 70-165 (165)
19 1w74_A Peptidyl-prolyl CIS-tra 100.0 1.2E-37 4E-42 284.2 16.1 117 330-453 73-191 (191)
20 3ich_A Peptidyl-prolyl CIS-tra 100.0 3.1E-37 1.1E-41 281.3 16.9 96 357-453 82-177 (188)
21 3pmp_A Cyclophilin A; peptidyl 100.0 4.3E-37 1.5E-41 275.4 17.2 96 357-454 69-164 (164)
22 2hq6_A Serologically defined c 100.0 3E-37 1E-41 280.5 16.2 104 351-455 76-181 (185)
23 2poy_A Peptidyl-prolyl CIS-tra 100.0 2.9E-37 9.9E-42 280.8 15.8 113 334-452 73-186 (186)
24 2r99_A Peptidyl-prolyl CIS-tra 100.0 5E-37 1.7E-41 276.8 17.2 96 357-454 78-173 (173)
25 4fru_A Cyclophilin B, peptidyl 100.0 6.6E-37 2.3E-41 279.3 17.1 96 358-454 80-175 (185)
26 3rdd_A Peptidyl-prolyl CIS-tra 100.0 9.4E-37 3.2E-41 277.4 16.7 96 357-454 89-184 (184)
27 2c3b_A Ppiase, cyclophilin; is 100.0 2.5E-37 8.5E-42 278.5 12.3 96 357-453 74-172 (172)
28 1z81_A Cyclophilin; structural 100.0 1.1E-36 3.9E-41 284.2 15.6 102 351-453 124-229 (229)
29 3bkp_A Cyclophilin; malaria, i 100.0 1.1E-36 3.7E-41 285.8 15.1 104 351-455 73-194 (232)
30 3k2c_A Peptidyl-prolyl CIS-tra 100.0 1E-35 3.4E-40 272.4 17.3 95 358-454 95-191 (193)
31 2ose_A Probable peptidyl-proly 100.0 7.3E-36 2.5E-40 280.8 14.6 117 332-455 76-208 (234)
32 3s6m_A Peptidyl-prolyl CIS-tra 100.0 1E-35 3.5E-40 267.6 14.8 84 369-453 71-167 (167)
33 1lop_A Cyclophilin A; rotamase 100.0 5.1E-36 1.7E-40 268.4 11.8 87 367-454 65-164 (164)
34 1v9t_A Cyclophilin B; beta bar 100.0 2.8E-35 9.7E-40 264.1 13.4 85 369-454 72-166 (166)
35 1ihg_A Cyclophilin 40; ppiase 100.0 1E-33 3.4E-38 287.1 15.9 117 332-454 68-185 (370)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.4E-29 4.9E-34 250.6 10.4 83 363-456 262-357 (369)
37 3fsi_A RT, reverse transcripta 91.7 0.12 4.1E-06 48.5 4.0 93 58-178 155-253 (255)
38 1rw3_A POL polyprotein; RNA an 77.9 0.92 3.1E-05 46.2 2.3 92 59-178 160-257 (455)
39 2zd1_A Reverse transcriptase/r 67.3 3.7 0.00013 42.9 3.9 78 58-140 141-224 (557)
40 2zd1_B P51 RT; P51/P66, hetero 54.3 4 0.00014 41.1 1.4 79 58-141 139-223 (428)
41 1mu2_A HIV-2 RT; HIV-2 reverse 51.3 8.9 0.00031 39.9 3.5 76 60-140 141-222 (555)
42 3kyl_A Telomerase reverse tran 42.6 10 0.00035 38.9 2.2 80 89-180 334-418 (596)
No 1
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=4.8e-40 Score=292.77 Aligned_cols=104 Identities=50% Similarity=0.916 Sum_probs=94.8
Q ss_pred cCCCCCCCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHh
Q psy1031 351 AGGDPTGTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRI 430 (456)
Q Consensus 351 q~Gd~~~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i 430 (456)
||||++++|+|++++||..++||..+.++|.++|+|||||++||+++|||||+++++++||++|+|||+|++|||+|++|
T Consensus 57 QgGd~~~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I 136 (160)
T 2fu0_A 57 QTGDPSGDGTGGESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDI 136 (160)
T ss_dssp EECCTTSSSSCCCCTTSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHH
T ss_pred EeCCcCCCCCCCCcccCCCccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHH
Confidence 45555566677788888899999866899998999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCcccEEEEEEEee
Q psy1031 431 GLVETDKNDRPVDDVKILKTHVRN 454 (456)
Q Consensus 431 ~~~~~~~~~~P~~~i~I~~~~v~~ 454 (456)
++++++++++|.++|+|.+|+|.+
T Consensus 137 ~~~~t~~~~~P~~~v~I~~~~v~~ 160 (160)
T 2fu0_A 137 EKVRTDKRDKPLEDIKILNIKINN 160 (160)
T ss_dssp HTSCBCTTSCBSSCCBEEEEEEC-
T ss_pred HhCCcCCCCCcCCCeEEEEEEEeC
Confidence 999999889999999999999864
No 2
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=8.1e-40 Score=292.02 Aligned_cols=105 Identities=46% Similarity=0.803 Sum_probs=95.2
Q ss_pred cCCCCCCCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHh
Q psy1031 351 AGGDPTGTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRI 430 (456)
Q Consensus 351 q~Gd~~~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i 430 (456)
||||++++|+||+++||..++||..+.++|..+|+|||||++||+++|||||+++++++||++|+|||+|++|||+|++|
T Consensus 52 QgGd~~~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I 131 (161)
T 2ok3_A 52 QTGDPTGTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDEL 131 (161)
T ss_dssp EECCTTSSSSCCCCTTSSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHH
T ss_pred ecCCCCCCCCCCCcccCCccccccCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHH
Confidence 45555555667778888889999877899988999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCC-CCCCcccEEEEEEEeec
Q psy1031 431 GLVETDKN-DRPVDDVKILKTHVRNT 455 (456)
Q Consensus 431 ~~~~~~~~-~~P~~~i~I~~~~v~~~ 455 (456)
++++++++ ++|.++|+|.+|+|+++
T Consensus 132 ~~~~~~~~~~~P~~~v~I~~~~i~~~ 157 (161)
T 2ok3_A 132 EKLPVNEKTYRPLNDVHIKDITIHAN 157 (161)
T ss_dssp HTCCBCTTTCCBSSCCBEEEEEEECC
T ss_pred HhCCccCCCCCcCCCeEEEEEEEecC
Confidence 99999887 99999999999999875
No 3
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=1.5e-39 Score=291.26 Aligned_cols=103 Identities=72% Similarity=1.248 Sum_probs=94.9
Q ss_pred cCCCCCCCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHh
Q psy1031 351 AGGDPTGTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRI 430 (456)
Q Consensus 351 q~Gd~~~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i 430 (456)
||||++++|+|++++||..++||+.+.++|..+|+|||||++||+|+|||||+++++++||++|+|||+|++|||+|++|
T Consensus 63 QgGd~~~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I 142 (166)
T 2x7k_A 63 QGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRV 142 (166)
T ss_dssp EECCTTSSSSCCCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHH
T ss_pred EcCCCCCCCCCCCccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHH
Confidence 45666666677788888899999877899988999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCcccEEEEEEEe
Q psy1031 431 GLVETDKNDRPVDDVKILKTHVR 453 (456)
Q Consensus 431 ~~~~~~~~~~P~~~i~I~~~~v~ 453 (456)
++++++++++|.++|+|.+|+|+
T Consensus 143 ~~~~t~~~~~P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 143 GMVETNSQDRPVDDVKIIKAYPS 165 (166)
T ss_dssp TTSCBCTTSCBSSCCEEEEEEEC
T ss_pred HcCCcCCCCCcCCCeEEEEEEEe
Confidence 99999988999999999999986
No 4
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.9e-39 Score=296.83 Aligned_cols=105 Identities=53% Similarity=0.896 Sum_probs=96.5
Q ss_pred cCCCCCCCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHh
Q psy1031 351 AGGDPTGTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRI 430 (456)
Q Consensus 351 q~Gd~~~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i 430 (456)
||||++++|+||+++||..++||+++.++|+.+|+|||||++||+|||||||+++++++||++|+|||+|++|||||++|
T Consensus 71 QgGd~~~~g~Gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I 150 (197)
T 1zkc_A 71 QGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAM 150 (197)
T ss_dssp EECCTTSSSSCCCBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHH
T ss_pred EcCCCCCCCCCCCccCCCccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHH
Confidence 45566666777788888999999778899998999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCC-CCCCcccEEEEEEEeec
Q psy1031 431 GLVETDKN-DRPVDDVKILKTHVRNT 455 (456)
Q Consensus 431 ~~~~~~~~-~~P~~~i~I~~~~v~~~ 455 (456)
++++++.+ ++|..+|+|.+|+|+++
T Consensus 151 ~~~~t~~~~~~P~~~i~I~~~~v~~d 176 (197)
T 1zkc_A 151 ENVESDPKTDRPKEEIRIDATTVFVD 176 (197)
T ss_dssp HHSCBCTTTCCBSSCCEEEEEEEEEC
T ss_pred HcCCCCCCCCCcCCCeEEEEEEEEcC
Confidence 99999886 99999999999999875
No 5
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=1.7e-39 Score=295.45 Aligned_cols=104 Identities=47% Similarity=0.841 Sum_probs=93.9
Q ss_pred CCCCCCCCCCCcccccccccccccccccccCcceEEeeccC----CCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHH
Q psy1031 352 GGDPTGTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSG----PDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVV 427 (456)
Q Consensus 352 ~Gd~~~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~----~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l 427 (456)
|||++++|+||+++||..+++|+.+.++|..+|+|||||++ ||+|||||||+++++++||++|+|||+|++|||+|
T Consensus 69 gGd~~~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv 148 (185)
T 2poe_A 69 GGDPTGTGKGGESIYGRYFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETL 148 (185)
T ss_dssp EEETTSSSSCCCBTTBSCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHH
T ss_pred cCCCCCCCCCCCccCCCcccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHH
Confidence 44444455666778888899998788999889999999998 99999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCcccEEEEEEEeec
Q psy1031 428 KRIGLVETDKNDRPVDDVKILKTHVRNT 455 (456)
Q Consensus 428 ~~i~~~~~~~~~~P~~~i~I~~~~v~~~ 455 (456)
++|++++++.+++|.++|+|.+|+|+++
T Consensus 149 ~~I~~~~t~~~~~P~~~v~I~~~~i~~d 176 (185)
T 2poe_A 149 NTLENCPSDKSHKPIDEIIIKDIVIHSN 176 (185)
T ss_dssp HHHHHSCBCTTSCBSSCCEEEEEEEECC
T ss_pred HHHHhCCcCCCCCcCCCeEEEEEEEECC
Confidence 9999999998899999999999999864
No 6
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.5e-39 Score=296.20 Aligned_cols=104 Identities=60% Similarity=0.998 Sum_probs=92.2
Q ss_pred CCCCCCCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhh
Q psy1031 352 GGDPTGTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIG 431 (456)
Q Consensus 352 ~Gd~~~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~ 431 (456)
|||++++|+||+++||..+++|.++.++|..+|+||||+.+||++||||||+++++++||++|+|||+|++|||+|++|+
T Consensus 91 gGd~~~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~ 170 (196)
T 2b71_A 91 GGDPTGTGKGGKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIA 170 (196)
T ss_dssp EEETTSSSSCCCBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHH
T ss_pred cCCCCCCCCCCCccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHH
Confidence 44444455667778888899997778999889999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccEEEEEEEeec
Q psy1031 432 LVETDKNDRPVDDVKILKTHVRNT 455 (456)
Q Consensus 432 ~~~~~~~~~P~~~i~I~~~~v~~~ 455 (456)
+++++.+++|.++|+|.+|+|+++
T Consensus 171 ~~~t~~~~~P~~~i~I~~~~i~~d 194 (196)
T 2b71_A 171 SVQTTATNKPIFDLKILRTSTAVN 194 (196)
T ss_dssp TSCBCTTCCBSSCCEEEEEEC---
T ss_pred hCCcCCCCCCCCCeEEEEEEEecC
Confidence 999998899999999999999865
No 7
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=5.5e-39 Score=289.85 Aligned_cols=102 Identities=56% Similarity=0.969 Sum_probs=93.4
Q ss_pred cCCCCCCCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHh
Q psy1031 351 AGGDPTGTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRI 430 (456)
Q Consensus 351 q~Gd~~~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i 430 (456)
||||++++|+|++++||..++||+...++|.++|+|||||.+||+++|||||+++++++||++|+|||+|++|||+|++|
T Consensus 73 QgGd~~~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I 152 (176)
T 2a2n_A 73 QTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRI 152 (176)
T ss_dssp EECCTTSSSSCCCCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHH
T ss_pred EccCCCCCCCCCCcccCCccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHH
Confidence 45555566777788888899999866899998999999999999999999999999999999999999999999999999
Q ss_pred hcCCCC-CCCCCCcccEEEEEEE
Q psy1031 431 GLVETD-KNDRPVDDVKILKTHV 452 (456)
Q Consensus 431 ~~~~~~-~~~~P~~~i~I~~~~v 452 (456)
++++++ .+++|.++|+|.+|+|
T Consensus 153 ~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 153 SNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp HTSCBCTTTCCBSSCCBEEEEEE
T ss_pred HcCCccCCCCccCCCeEEEEEEE
Confidence 999998 6899999999999987
No 8
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=7.2e-39 Score=295.63 Aligned_cols=89 Identities=42% Similarity=0.711 Sum_probs=84.4
Q ss_pred cccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhhcCCCCCCCCCCcccE
Q psy1031 367 GKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIGLVETDKNDRPVDDVK 446 (456)
Q Consensus 367 g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~~~~~~~~~~P~~~i~ 446 (456)
|..|+||.++.++|+.+|+|||||++||++||||||+++++++||++|+|||+|++|||||++|++++++.+++|..+|+
T Consensus 86 g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~ 165 (201)
T 3bo7_A 86 GAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPK 165 (201)
T ss_dssp CCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCCB
T ss_pred CCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCCCeE
Confidence 45788997788999889999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EEEEEEeec
Q psy1031 447 ILKTHVRNT 455 (456)
Q Consensus 447 I~~~~v~~~ 455 (456)
|.+|+|++|
T Consensus 166 I~~~~v~~d 174 (201)
T 3bo7_A 166 VEEIIVFKN 174 (201)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEcC
Confidence 999999875
No 9
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.5e-38 Score=287.69 Aligned_cols=102 Identities=49% Similarity=0.795 Sum_probs=93.1
Q ss_pred cCCCCC-CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHH
Q psy1031 351 AGGDPT-GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKR 429 (456)
Q Consensus 351 q~Gd~~-~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~ 429 (456)
||||++ ++|+|++++||..|+||. ..++|+++|+|||||++||+|+|||||+++++++||++|+|||+|++|||+|++
T Consensus 75 QgGd~~~~~G~gg~si~g~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~ 153 (177)
T 1mzw_A 75 QGGDFVNGDGTGVASIYRGPFADEN-FKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRK 153 (177)
T ss_dssp EECCTTTSSSCCCCCTTSSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHH
T ss_pred EcCCcccCCCCCCCccCCCcccCcc-cccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHH
Confidence 455543 566777888888999996 689999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCCcccEEEEEEEe
Q psy1031 430 IGLVETDKNDRPVDDVKILKTHVR 453 (456)
Q Consensus 430 i~~~~~~~~~~P~~~i~I~~~~v~ 453 (456)
|++++++++++|.++|+|.+|+++
T Consensus 154 I~~~~t~~~~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 154 IENVPTGPNNKPKLPVVISQCGEM 177 (177)
T ss_dssp HHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred HHhCCcCCCCCCCCCEEEEeceeC
Confidence 999999888999999999999975
No 10
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=2.5e-38 Score=286.81 Aligned_cols=119 Identities=45% Similarity=0.686 Sum_probs=107.2
Q ss_pred cccCCccceeeeeccceeecCcCCCCC-CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCC
Q psy1031 330 NIGEFSPIQRMEKIGNHITSGAGGDPT-GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQ 408 (456)
Q Consensus 330 ~~~~~s~~~rv~~iwN~i~~~q~Gd~~-~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~ 408 (456)
.+|+++.|||+++ ++++ ||||++ ++|+|++++||..++||. +.++|+++|+|||||.+||+|+|||||++++++
T Consensus 60 ~~Y~g~~FhRvi~--~f~i--QgGd~~~~~g~gg~si~g~~f~dE~-~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~ 134 (179)
T 2wfi_A 60 LHYKSCLFHRVVK--DFMV--QGGDFSEGNGRGGESIYGGFFEDES-FAVKHNKEFLLSMANRGKDTNGSQFFITTKPTP 134 (179)
T ss_dssp SCCTTCBEEEEET--TTEE--EECCTTTSSSSCCCCTTSSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCG
T ss_pred CeECCCEEEEEEC--CCEE--EcccccCCCCCCCCcccCCcccccc-cCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCc
Confidence 4556666777665 6666 888876 788889999999999996 689999999999999999999999999999999
Q ss_pred CCCCCccEEEEEEcCHHHHHHhhcCCCCCCCCCCcccEEEEEEEe
Q psy1031 409 WLDGKHAIFGRIYSGMSVVKRIGLVETDKNDRPVDDVKILKTHVR 453 (456)
Q Consensus 409 ~ld~~~~vfG~V~~G~~~l~~i~~~~~~~~~~P~~~i~I~~~~v~ 453 (456)
+||++|+|||+|++|||+|++|++++++++++|.++|+|.+|+++
T Consensus 135 ~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 135 HLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGEL 179 (179)
T ss_dssp GGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBSSCEEEEEEEEC
T ss_pred ccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCCCCeEEEeCeeC
Confidence 999999999999999999999999999988999999999999975
No 11
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=3.5e-38 Score=285.53 Aligned_cols=118 Identities=45% Similarity=0.697 Sum_probs=102.1
Q ss_pred cCCccceeeeeccceeecCcCCCCC-CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCC
Q psy1031 332 GEFSPIQRMEKIGNHITSGAGGDPT-GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWL 410 (456)
Q Consensus 332 ~~~s~~~rv~~iwN~i~~~q~Gd~~-~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~l 410 (456)
|+++.|||+++ ++++ ||||++ ++|+|++++||..++||. ..++|..+|+|||||++||+|+|||||+++++++|
T Consensus 59 Y~g~~FhRvi~--~f~i--QgGd~~~~~g~gg~si~g~~f~dE~-~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~L 133 (177)
T 1a58_A 59 YKGSTFHRVIK--NFMI--QGGDFTKGDGTGGESIYGGMFDDEE-FVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHL 133 (177)
T ss_dssp CTTCBEEEEET--TTEE--EECCCSSSSSSCCCCTTSSCBCCCC-CCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGG
T ss_pred eCCCEEEEEEC--CCEE--EeCCccCCCCCCCCcccCCcccCcc-cCcccCCCeEEEEeeCCCCCceeEEEEECCCCCcc
Confidence 33444444433 4444 667765 677888899999999996 67899999999999999999999999999999999
Q ss_pred CCCccEEEEEEcCHHHHHHhhcCCCCCCCCCCcccEEEEEEEee
Q psy1031 411 DGKHAIFGRIYSGMSVVKRIGLVETDKNDRPVDDVKILKTHVRN 454 (456)
Q Consensus 411 d~~~~vfG~V~~G~~~l~~i~~~~~~~~~~P~~~i~I~~~~v~~ 454 (456)
|++|+|||+|++|||+|++|++++++++++|.++|+|.+|+++.
T Consensus 134 Dg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 134 NNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGELV 177 (177)
T ss_dssp TTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEC
T ss_pred CCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCCCCeEEEEeEEEC
Confidence 99999999999999999999999999889999999999999873
No 12
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=291.67 Aligned_cols=104 Identities=71% Similarity=1.235 Sum_probs=93.4
Q ss_pred CCCCCCCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhh
Q psy1031 352 GGDPTGTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIG 431 (456)
Q Consensus 352 ~Gd~~~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~ 431 (456)
|||++++|+|++++||..+++|+.+.++|..+|+|||||.+||+|+|||||+++++++||++|+|||+|++|||+|++|+
T Consensus 64 gGd~~~~g~gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~ 143 (203)
T 2k7n_A 64 GGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVG 143 (203)
T ss_dssp EECSSSSSSCCCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHH
T ss_pred cCCCCCCCCCCCccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHH
Confidence 44444455566777788899998778999889999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccEEEEEEEeec
Q psy1031 432 LVETDKNDRPVDDVKILKTHVRNT 455 (456)
Q Consensus 432 ~~~~~~~~~P~~~i~I~~~~v~~~ 455 (456)
+++++++++|.++|+|.+|+|+++
T Consensus 144 ~~~t~~~~~P~~~V~I~~~~v~~~ 167 (203)
T 2k7n_A 144 MVETNSQDRPVDDVKIIKAYPSGG 167 (203)
T ss_dssp SCCEEETTEECCCCBEEEEEECCC
T ss_pred cCCcCCCCCcCCCeEEEEEEEEec
Confidence 999988899999999999999864
No 13
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=287.50 Aligned_cols=121 Identities=46% Similarity=0.686 Sum_probs=108.7
Q ss_pred cccCCccceeeeeccceeecCcCCCCC-CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCC
Q psy1031 330 NIGEFSPIQRMEKIGNHITSGAGGDPT-GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQ 408 (456)
Q Consensus 330 ~~~~~s~~~rv~~iwN~i~~~q~Gd~~-~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~ 408 (456)
.+|+++.|||+++ ++++ ||||++ ++|+|++++||..++||. +.++|+++|+|||||.+||+|+|||||++++++
T Consensus 70 ~~Y~g~~FhRVi~--~fmi--QgGd~~~~~G~gg~siyg~~f~dE~-~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~ 144 (192)
T 2he9_A 70 LCYKGSTFHRVVK--NFMI--QGGDFSEGNGKGGESIYGGYFKDEN-FILKHDRAFLLSMANRGKHTNGSQFFITTKPAP 144 (192)
T ss_dssp SCCTTCBEEEEET--TTEE--EECCTTTSSSSCCCCTTSSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCG
T ss_pred CeECCCEEEEEEC--CCEE--EcCcccCCCCCCCCcccCCcccCcc-ccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCc
Confidence 4566666777665 6676 888876 788899999999999996 689999999999999999999999999999999
Q ss_pred CCCCCccEEEEEEcCHHHHHHhhcCCCCCCCCCCcccEEEEEEEeec
Q psy1031 409 WLDGKHAIFGRIYSGMSVVKRIGLVETDKNDRPVDDVKILKTHVRNT 455 (456)
Q Consensus 409 ~ld~~~~vfG~V~~G~~~l~~i~~~~~~~~~~P~~~i~I~~~~v~~~ 455 (456)
+||++|+|||+|++|||||++|++++++++++|..+|+|.+|+++..
T Consensus 145 ~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 145 HLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp GGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEECC-
T ss_pred ccCCCccEEEEEEeCHHHHHHHHcCCcCCCCCCcCCeEEEEeEEEcc
Confidence 99999999999999999999999999998899999999999999863
No 14
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=3.9e-38 Score=283.02 Aligned_cols=95 Identities=57% Similarity=0.933 Sum_probs=88.5
Q ss_pred CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhhcCCCC
Q psy1031 357 GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIGLVETD 436 (456)
Q Consensus 357 ~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~~~~~~ 436 (456)
++|+|++++||..++||. +.++|+ +|+|||||++||+|+|||||+++++++||++|+|||+|++|||+|++|++++++
T Consensus 78 ~~g~gg~si~g~~f~dE~-~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~ 155 (172)
T 2haq_A 78 FDGTGGKSIYGEKFADEN-LNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTN 155 (172)
T ss_dssp SSSSCCCCSSSSCBCCCC-CCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC
T ss_pred CCCCCCccccCCcccCcC-CCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcC
Confidence 455667788888999994 789999 999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccEEEEEEEe
Q psy1031 437 KNDRPVDDVKILKTHVR 453 (456)
Q Consensus 437 ~~~~P~~~i~I~~~~v~ 453 (456)
++++|.++|+|.+|+++
T Consensus 156 ~~~~P~~~v~I~~~g~l 172 (172)
T 2haq_A 156 SHDRPVKPVKIVASGEL 172 (172)
T ss_dssp GGGCBSSCEEEEEEEEC
T ss_pred CCCcCCCCeEEEEeEEC
Confidence 88899999999999975
No 15
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=6.7e-38 Score=282.68 Aligned_cols=118 Identities=47% Similarity=0.775 Sum_probs=102.5
Q ss_pred cCCccceeeeeccceeecCcCCCCC-CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCC
Q psy1031 332 GEFSPIQRMEKIGNHITSGAGGDPT-GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWL 410 (456)
Q Consensus 332 ~~~s~~~rv~~iwN~i~~~q~Gd~~-~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~l 410 (456)
|+++.|||+++ ++++ ||||++ ++|+|++++||..++||. +.++|.++|+|||||++||+|||||||+++++++|
T Consensus 55 Y~g~~FhRvi~--~f~i--QgGd~~~~~G~gg~siyg~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~L 129 (173)
T 2igv_A 55 FKGSKFHRIIP--NFMI--QGGDFTRGNGTGGESIYGEKFPDEN-FKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWL 129 (173)
T ss_dssp CTTCBCCEEET--TTEE--EECCTTTSSSSCCCBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGG
T ss_pred ECCCEEEEEEC--CCEE--EcCCCCCCCCCCCCccCCCcccCcc-cccCCCCCeEEEEeeCCCCCcceEEEEEcCCcccc
Confidence 34444555444 4555 677765 678888999999999996 68999999999999999999999999999999999
Q ss_pred CCCccEEEEEEcCHHHHHHhhcCCCCCCCCCCcccEEEEEEEeec
Q psy1031 411 DGKHAIFGRIYSGMSVVKRIGLVETDKNDRPVDDVKILKTHVRNT 455 (456)
Q Consensus 411 d~~~~vfG~V~~G~~~l~~i~~~~~~~~~~P~~~i~I~~~~v~~~ 455 (456)
|++|+|||+|++|||+|++|++++++ +++|.++|+|.+|++++.
T Consensus 130 Dg~~~vFG~Vv~G~dvv~~I~~~~t~-~~~P~~~v~I~~~g~l~~ 173 (173)
T 2igv_A 130 DGKHVVFGRVVEGLDVVKAVESNGSQ-SGKPVKDCMIADCGQLKA 173 (173)
T ss_dssp TTTSCEEEEEEECHHHHHHHHTTCCT-TSCCSSCEEEEEEEEECC
T ss_pred CCCeeEEEEEecCHHHHHHHHhCCCC-CCCCCCCEEEEEeEEEcC
Confidence 99999999999999999999999884 689999999999999863
No 16
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=6.9e-38 Score=281.80 Aligned_cols=101 Identities=50% Similarity=0.843 Sum_probs=92.8
Q ss_pred cCCCCC-CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHH
Q psy1031 351 AGGDPT-GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKR 429 (456)
Q Consensus 351 q~Gd~~-~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~ 429 (456)
||||++ ++|+|++++||..++||. +.++|+++|+|||||.+||+|+|||||+++++++||++|+|||+|++|||+|++
T Consensus 69 QgGd~~~~~g~gg~si~g~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~ 147 (170)
T 1qng_A 69 QGGDITNGNGSGGESIYGRSFTDEN-FNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVRE 147 (170)
T ss_dssp EECCTTTSSSSCCCBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHH
T ss_pred EcCCccCCCCCCCccccCCcccccc-cccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHH
Confidence 566654 567788889999999996 789999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCCcccEEEEEEEe
Q psy1031 430 IGLVETDKNDRPVDDVKILKTHVR 453 (456)
Q Consensus 430 i~~~~~~~~~~P~~~i~I~~~~v~ 453 (456)
|+++++ ++++|.++|+|.+|+++
T Consensus 148 I~~~~t-~~~~P~~~v~I~~cG~l 170 (170)
T 1qng_A 148 MEKEGA-KSGYVKRSVVITDCGEL 170 (170)
T ss_dssp HHTTCC-TTCCCSSCEEEEEEEEC
T ss_pred HHhCCC-CCCCCCCCeEEEeceeC
Confidence 999999 67899999999999975
No 17
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.6e-37 Score=279.53 Aligned_cols=96 Identities=49% Similarity=0.838 Sum_probs=88.2
Q ss_pred CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhhcCCCC
Q psy1031 357 GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIGLVETD 436 (456)
Q Consensus 357 ~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~~~~~~ 436 (456)
++|+||+++||..++||. +.++|.++|+|||||++||+|+|||||+++++++||++|+|||+|++|||+|++|++++++
T Consensus 77 ~~G~gg~si~g~~f~dE~-~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~ 155 (172)
T 2cmt_A 77 GDGTGGKSIYGRKFDDEN-FQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSK 155 (172)
T ss_dssp SSSSCCCBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCT
T ss_pred CCCCCCCccCCCcccccc-cCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC
Confidence 445677788888899996 6899998999999999999999999999999999999999999999999999999999885
Q ss_pred CCCCCCcccEEEEEEEee
Q psy1031 437 KNDRPVDDVKILKTHVRN 454 (456)
Q Consensus 437 ~~~~P~~~i~I~~~~v~~ 454 (456)
+++|.++|+|.+|++++
T Consensus 156 -~~~P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 156 -SGKVKEPVIISRCGELI 172 (172)
T ss_dssp -TCCCSSCEEEEEEEEEC
T ss_pred -CCCCCCCEEEEEeEeEC
Confidence 68999999999999874
No 18
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.8e-37 Score=277.79 Aligned_cols=96 Identities=50% Similarity=0.839 Sum_probs=87.7
Q ss_pred CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhhcCCCC
Q psy1031 357 GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIGLVETD 436 (456)
Q Consensus 357 ~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~~~~~~ 436 (456)
++|+|++++||..++||. +.++|.++|+|||||++||+++|||||+++++++||++|+|||+|++|||+|++|+++++
T Consensus 70 ~~g~gg~si~g~~f~dE~-~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~- 147 (165)
T 2z6w_A 70 HNGTGGKSIYGSRFPDEN-FTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS- 147 (165)
T ss_dssp SSSSCCCBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-
T ss_pred CCCCCCCcccCCcccCcc-cccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC-
Confidence 345667778888899995 789999899999999999999999999999999999999999999999999999999886
Q ss_pred CCCCCCcccEEEEEEEee
Q psy1031 437 KNDRPVDDVKILKTHVRN 454 (456)
Q Consensus 437 ~~~~P~~~i~I~~~~v~~ 454 (456)
.+++|.++|+|.+|+++.
T Consensus 148 ~~~~P~~~v~I~~~g~l~ 165 (165)
T 2z6w_A 148 KSGRTSKKIVITDCGQLS 165 (165)
T ss_dssp TTSCCSSCEEEEEEEECC
T ss_pred CCCCCCCcEEEEEeEEEC
Confidence 578999999999999873
No 19
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-37 Score=284.24 Aligned_cols=117 Identities=45% Similarity=0.710 Sum_probs=106.7
Q ss_pred cccCCccceeeeeccceeecCcCCCCCCCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCC
Q psy1031 330 NIGEFSPIQRMEKIGNHITSGAGGDPTGTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQW 409 (456)
Q Consensus 330 ~~~~~s~~~rv~~iwN~i~~~q~Gd~~~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ 409 (456)
.+|+++.|||+++ ++++ ||||++++|+|+ ||..|+||+++.++|.++|+|||||++||+|||||||+++++++
T Consensus 73 ~~Y~g~~FhRVi~--~fmi--QgGd~~g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~ 145 (191)
T 1w74_A 73 PFYDGAVFHRVIQ--GFMI--QGGDPTGTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPH 145 (191)
T ss_dssp CSSTTEEEEEEET--TTEE--EECCTTSSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGG
T ss_pred CccCCCEEEEEeC--CCEE--ecCCCCCCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcc
Confidence 4577777888766 7777 888888888877 47899999778899999999999999999999999999999999
Q ss_pred CCCCccEEEEEEc--CHHHHHHhhcCCCCCCCCCCcccEEEEEEEe
Q psy1031 410 LDGKHAIFGRIYS--GMSVVKRIGLVETDKNDRPVDDVKILKTHVR 453 (456)
Q Consensus 410 ld~~~~vfG~V~~--G~~~l~~i~~~~~~~~~~P~~~i~I~~~~v~ 453 (456)
||++|+|||+|++ |||+|++|++++++.+++|.++|+|.+|+|+
T Consensus 146 LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 146 LNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp GTTTSCEEEEECSHHHHHHHHHHHTSCBCTTSCBSSCCEEEEEEEC
T ss_pred cCCCeeEEEEEEECCCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEC
Confidence 9999999999999 9999999999999988999999999999984
No 20
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.1e-37 Score=281.29 Aligned_cols=96 Identities=53% Similarity=0.904 Sum_probs=89.9
Q ss_pred CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhhcCCCC
Q psy1031 357 GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIGLVETD 436 (456)
Q Consensus 357 ~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~~~~~~ 436 (456)
++|+||+++||..++||. ..++|..+|+|||||.+||+|+|||||+++++++||++|+|||+|++|||+|++|++++++
T Consensus 82 ~~g~gg~si~g~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~ 160 (188)
T 3ich_A 82 GDGTGGKSIYGERFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTD 160 (188)
T ss_dssp SSSSCCCBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC
T ss_pred CCCCCCccccCCcccccc-cCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcC
Confidence 456677788888999994 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccEEEEEEEe
Q psy1031 437 KNDRPVDDVKILKTHVR 453 (456)
Q Consensus 437 ~~~~P~~~i~I~~~~v~ 453 (456)
.+++|.++|+|.+|+++
T Consensus 161 ~~~~P~~~v~I~~~~~l 177 (188)
T 3ich_A 161 SRDKPLKDVIIADCGKI 177 (188)
T ss_dssp TTSCBSSCEEEEEEEEE
T ss_pred CCCeECCCEEEEEeEEE
Confidence 88899999999999987
No 21
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=4.3e-37 Score=275.42 Aligned_cols=96 Identities=46% Similarity=0.810 Sum_probs=87.5
Q ss_pred CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhhcCCCC
Q psy1031 357 GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIGLVETD 436 (456)
Q Consensus 357 ~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~~~~~~ 436 (456)
++|+|++++||..+++|. +.++|.++|+|||||.+||+++|||||+++++++||++|+|||+|++|||+|++|++++++
T Consensus 69 ~~g~gg~si~g~~~~dE~-~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~ 147 (164)
T 3pmp_A 69 HNGTGGKSIYGEKFADEN-FQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA 147 (164)
T ss_dssp SSSSCCCBTTBSCBCCCC-CCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT
T ss_pred CCCCCCcccCCccccccc-cccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC
Confidence 345566778888899994 7899998999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCcccEEEEEEEee
Q psy1031 437 KNDRPVDDVKILKTHVRN 454 (456)
Q Consensus 437 ~~~~P~~~i~I~~~~v~~ 454 (456)
+++|.++|+|.+|+++.
T Consensus 148 -~~~P~~~v~I~~cg~l~ 164 (164)
T 3pmp_A 148 -SGKTNATIKITDCGTVA 164 (164)
T ss_dssp -TCCCSSCEEEEEEEEC-
T ss_pred -CCCcccCEEEEeCeEEC
Confidence 78999999999999874
No 22
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=280.46 Aligned_cols=104 Identities=46% Similarity=0.793 Sum_probs=93.0
Q ss_pred cCCCCCCCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHH--H
Q psy1031 351 AGGDPTGTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVV--K 428 (456)
Q Consensus 351 q~Gd~~~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l--~ 428 (456)
||||++++|+||+++||..++||....++|..+|+|||||.+||+|+|||||+++++++||++|+|||+|+ |++++ +
T Consensus 76 QgGd~~~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~ 154 (185)
T 2hq6_A 76 QGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNML 154 (185)
T ss_dssp EECCTTSSSSCCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHH
T ss_pred EcCCCCCCCCCCCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhh
Confidence 45555556677778888899999877899988999999999999999999999999999999999999999 88874 6
Q ss_pred HhhcCCCCCCCCCCcccEEEEEEEeec
Q psy1031 429 RIGLVETDKNDRPVDDVKILKTHVRNT 455 (456)
Q Consensus 429 ~i~~~~~~~~~~P~~~i~I~~~~v~~~ 455 (456)
+|++++++++++|.++|+|.+|+++++
T Consensus 155 ~i~~~~~~~~~~P~~~v~I~~~~v~~~ 181 (185)
T 2hq6_A 155 RLSEVDIDDDERPHNPHKIKSCEVLFN 181 (185)
T ss_dssp HTTCSCBCTTSCBSSCCEEEEEEEEEC
T ss_pred HHhhCCcCCCCCCCCCeEEEEEEEeCC
Confidence 899999988999999999999999875
No 23
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=2.9e-37 Score=280.80 Aligned_cols=113 Identities=48% Similarity=0.771 Sum_probs=97.4
Q ss_pred CccceeeeeccceeecCcCCCCC-CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCC
Q psy1031 334 FSPIQRMEKIGNHITSGAGGDPT-GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDG 412 (456)
Q Consensus 334 ~s~~~rv~~iwN~i~~~q~Gd~~-~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~ 412 (456)
++.|||+++ ++++ ||||++ ++|+|++++||..|+||. +.++|.++|+|||||.+||+|||||||+++++++||+
T Consensus 73 g~~FhRVi~--~f~i--QgGd~~~~~G~gg~si~g~~f~dE~-~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg 147 (186)
T 2poy_A 73 GSFFHRIIP--QFMI--QGGDFTRGDGTGGESIYGSKFRDEN-FVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDG 147 (186)
T ss_dssp TCBCCEEET--TTEE--EECCTTTSSSSCCCCTTC-CBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTT
T ss_pred CCEEEEEeC--CCEE--EeCCCCCCCCCCCCccCCCcccCcc-cccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCC
Confidence 444444443 4554 667765 677888899999999996 7899999999999999999999999999999999999
Q ss_pred CccEEEEEEcCHHHHHHhhcCCCCCCCCCCcccEEEEEEE
Q psy1031 413 KHAIFGRIYSGMSVVKRIGLVETDKNDRPVDDVKILKTHV 452 (456)
Q Consensus 413 ~~~vfG~V~~G~~~l~~i~~~~~~~~~~P~~~i~I~~~~v 452 (456)
+|+|||+|++|||||++|+++++ ++++|.++|+|.+|++
T Consensus 148 ~~tVFG~Vv~Gmdvv~~I~~~~t-~~~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 148 KHVVFGKVLEGMEVVKSIEKCGS-QNGKPTKSVCITASGV 186 (186)
T ss_dssp TSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEEEEEEC
T ss_pred CeeEEEEEecCHHHHHHHHhCCC-CCCCCCCCEEEEeCCC
Confidence 99999999999999999999998 4789999999999974
No 24
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=5e-37 Score=276.76 Aligned_cols=96 Identities=50% Similarity=0.837 Sum_probs=88.0
Q ss_pred CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhhcCCCC
Q psy1031 357 GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIGLVETD 436 (456)
Q Consensus 357 ~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~~~~~~ 436 (456)
++|+||+++||..|+||. +.++|..+|+|||||++||+|+|||||+++++++||++|+|||+|++|||+|++|++++++
T Consensus 78 ~~g~gg~si~g~~f~dE~-~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~ 156 (173)
T 2r99_A 78 HNGTGGKSIYGKKFDDEN-FILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSK 156 (173)
T ss_dssp SSSSCCCBTTBSCBCCCC-CCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT
T ss_pred CCCCCCCccCCCcccCcc-cCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC
Confidence 345667788888899995 6899999999999999999999999999999999999999999999999999999998886
Q ss_pred CCCCCCcccEEEEEEEee
Q psy1031 437 KNDRPVDDVKILKTHVRN 454 (456)
Q Consensus 437 ~~~~P~~~i~I~~~~v~~ 454 (456)
+++|.++|+|.+|+++.
T Consensus 157 -~~~P~~~v~I~~cG~l~ 173 (173)
T 2r99_A 157 -DGKPKQKVIIADCGEYV 173 (173)
T ss_dssp -TCCCSSCEEEEEEEECC
T ss_pred -CCCCCCCeEEEEeeeEC
Confidence 58999999999999874
No 25
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=6.6e-37 Score=279.32 Aligned_cols=96 Identities=52% Similarity=0.891 Sum_probs=89.1
Q ss_pred CCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhhcCCCCC
Q psy1031 358 TGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIGLVETDK 437 (456)
Q Consensus 358 ~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~~~~~~~ 437 (456)
+|+|+.++||..+++|. ..++|.++|+|||||.+||+|||||||+++++++||++|+|||+|++|||+|++|+++++++
T Consensus 80 ~g~gg~si~g~~f~de~-~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~ 158 (185)
T 4fru_A 80 DGTGGKSIYGERFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDG 158 (185)
T ss_dssp SSSCCCBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCccccCCccCccc-cccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCC
Confidence 34566778888899996 68999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCcccEEEEEEEee
Q psy1031 438 NDRPVDDVKILKTHVRN 454 (456)
Q Consensus 438 ~~~P~~~i~I~~~~v~~ 454 (456)
+++|.++|+|.+|+++.
T Consensus 159 ~~~P~~~v~I~~~g~l~ 175 (185)
T 4fru_A 159 RDKPLKDVTIADCGKIE 175 (185)
T ss_dssp TSCBSSCEEEEEEEEEE
T ss_pred CCcCCCCEEEEEceEEe
Confidence 99999999999999874
No 26
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=9.4e-37 Score=277.45 Aligned_cols=96 Identities=49% Similarity=0.836 Sum_probs=87.1
Q ss_pred CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhhcCCCC
Q psy1031 357 GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIGLVETD 436 (456)
Q Consensus 357 ~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~~~~~~ 436 (456)
++|+|+.++||..+++|. +.++|.++|+|||||.+||+++|||||+++++++||++|+|||+|++|||||++|++++++
T Consensus 89 ~~g~gg~si~g~~~~de~-~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~ 167 (184)
T 3rdd_A 89 HNGTGGKSIYGEKFEDEN-FILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSR 167 (184)
T ss_dssp SSSSCCCBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT
T ss_pred CCCCCCcccCCCcccCcc-cccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCC
Confidence 345566677788888886 6789999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCCcccEEEEEEEee
Q psy1031 437 KNDRPVDDVKILKTHVRN 454 (456)
Q Consensus 437 ~~~~P~~~i~I~~~~v~~ 454 (456)
+++|..+|+|.+|++++
T Consensus 168 -~g~P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 168 -NGKTSKKITIADCGQLE 184 (184)
T ss_dssp -TSCCSSCEEEEEEEECC
T ss_pred -CCCCcCCeEEEeCeEEC
Confidence 78999999999999975
No 27
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.5e-37 Score=278.48 Aligned_cols=96 Identities=52% Similarity=0.799 Sum_probs=64.5
Q ss_pred CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEc--CHHHHHHhhcCC
Q psy1031 357 GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYS--GMSVVKRIGLVE 434 (456)
Q Consensus 357 ~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~--G~~~l~~i~~~~ 434 (456)
++|+|++++||..++||. +.++|.++|+|||||.+||+|+|||||+++++++||++|+|||+|++ |||+|++|++++
T Consensus 74 ~~g~gg~si~g~~f~dE~-~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~ 152 (172)
T 2c3b_A 74 GNGTGGRSIYGDKFADEN-FSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALG 152 (172)
T ss_dssp --------------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTC
T ss_pred CCCCCCcccCCCcccCcc-cccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCC
Confidence 445566777888888994 77889889999999999999999999999999999999999999999 999999999999
Q ss_pred CCCCC-CCCcccEEEEEEEe
Q psy1031 435 TDKND-RPVDDVKILKTHVR 453 (456)
Q Consensus 435 ~~~~~-~P~~~i~I~~~~v~ 453 (456)
++.++ +|.++|+|.+|+++
T Consensus 153 t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 153 SSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp CTTSCCCSSSCCEEEEEEEC
T ss_pred CCCCCccCCCCeEEEeCeeC
Confidence 98654 99999999999975
No 28
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-36 Score=284.22 Aligned_cols=102 Identities=43% Similarity=0.733 Sum_probs=93.4
Q ss_pred cCCCCC-CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEE--cCHHHH
Q psy1031 351 AGGDPT-GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIY--SGMSVV 427 (456)
Q Consensus 351 q~Gd~~-~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~--~G~~~l 427 (456)
||||++ ++|+|++++||..|+||. +.++|.++|+|||||.+||+|+|||||+++++++||++|+|||+|+ +|||||
T Consensus 124 QgGD~~~g~G~Gg~siyg~~f~dE~-~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv 202 (229)
T 1z81_A 124 QGGDFINHNGSGSLSIYGEKFDDEN-FDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLL 202 (229)
T ss_dssp EECCTTTSSSCCCCBTTBSCCCCCC-CCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHH
T ss_pred EcCCCcCCCCCCCCccCCCcccccc-cccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHH
Confidence 455553 567788888999999996 7899988999999999999999999999999999999999999999 999999
Q ss_pred HHhhcCCCCCC-CCCCcccEEEEEEEe
Q psy1031 428 KRIGLVETDKN-DRPVDDVKILKTHVR 453 (456)
Q Consensus 428 ~~i~~~~~~~~-~~P~~~i~I~~~~v~ 453 (456)
++|++++++++ ++|.++|+|.+|+++
T Consensus 203 ~~I~~~~t~~~~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 203 KKIENVSVTPYIYKPKIPINVVECGEL 229 (229)
T ss_dssp HHHHHSCBCTTTCCBSSCEEEEEEEEC
T ss_pred HHHHhCCCCCCCCCCCCCeEEEeCeeC
Confidence 99999999876 999999999999975
No 29
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-36 Score=285.80 Aligned_cols=104 Identities=41% Similarity=0.663 Sum_probs=89.4
Q ss_pred cCCCCCCCCCCCcccc--cccccccccccccccCcceEEeeccCC--------------CCCcceEEEEeCCCCCCCCCc
Q psy1031 351 AGGDPTGTGRGGSSIY--GKTFADEIHEELKHTGAGILSMANSGP--------------DTNGSQFFITLAPTQWLDGKH 414 (456)
Q Consensus 351 q~Gd~~~~g~g~~~~~--g~~~~~e~~~~~~h~~~G~l~ma~~~~--------------~~~~sqFfI~~~~~~~ld~~~ 414 (456)
||||++++|+||+++| |..|+||+.+.++|+.+|+||||+.++ ++||||||||++++++||++|
T Consensus 73 QgGdp~~~G~Gg~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~ 152 (232)
T 3bkp_A 73 QGGDPTGTGRGGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAY 152 (232)
T ss_dssp EECCTTSSSSCCCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTS
T ss_pred EcCCCCCCCCCCCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCc
Confidence 3445555556666666 778899987789999999999999986 699999999999999999999
Q ss_pred cEEEEEEcCHHH--HHHhhcCCCCCCCCCCcccEEEEEEEeec
Q psy1031 415 AIFGRIYSGMSV--VKRIGLVETDKNDRPVDDVKILKTHVRNT 455 (456)
Q Consensus 415 ~vfG~V~~G~~~--l~~i~~~~~~~~~~P~~~i~I~~~~v~~~ 455 (456)
+|||+|+ ||++ |++|++++++.+++|..+|+|.+|+|+++
T Consensus 153 tVFG~Vv-g~~v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~d 194 (232)
T 3bkp_A 153 TLFGKVT-GHTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWN 194 (232)
T ss_dssp CEEEEEC-GGGHHHHHHHTTSCBCGGGCBSSCCBEEEEEEEEC
T ss_pred cEEEEEE-eCchHHHHHHHcCCcCCCCCcCCCeEEEEEEEEcC
Confidence 9999999 7766 89999999998999999999999999875
No 30
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=1e-35 Score=272.43 Aligned_cols=95 Identities=52% Similarity=0.807 Sum_probs=87.3
Q ss_pred CCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCCCCCccEEEEEEcCHHHHHHhhcCCCCC
Q psy1031 358 TGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHAIFGRIYSGMSVVKRIGLVETDK 437 (456)
Q Consensus 358 ~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~ld~~~~vfG~V~~G~~~l~~i~~~~~~~ 437 (456)
+|+|+.++||..+++|. +.++|.++|+|||||.+||+++|||||+++++++||++|+|||+|++|||||++|++++++
T Consensus 95 ~g~gg~si~g~~f~dE~-~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~- 172 (193)
T 3k2c_A 95 NGTGGRSIYGEKFPDEN-FELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE- 172 (193)
T ss_dssp SSSCCCCTTSSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-
T ss_pred CCcCCcccCCCcccccc-cccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC-
Confidence 44566777788888985 7899999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCC--cccEEEEEEEee
Q psy1031 438 NDRPV--DDVKILKTHVRN 454 (456)
Q Consensus 438 ~~~P~--~~i~I~~~~v~~ 454 (456)
+++|. .+|+|.+|++++
T Consensus 173 ~g~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 173 SGQVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp TCCCCTTCCEEEEEEEECC
T ss_pred CCcCccCccEEEEEceEeC
Confidence 67999 999999999986
No 31
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=7.3e-36 Score=280.83 Aligned_cols=117 Identities=24% Similarity=0.352 Sum_probs=101.9
Q ss_pred cCCccceeeeeccceeecCcCCC-CCCCCCCCccccccc-----ccccccccccccCcceEEeec----cCCCCCcceEE
Q psy1031 332 GEFSPIQRMEKIGNHITSGAGGD-PTGTGRGGSSIYGKT-----FADEIHEELKHTGAGILSMAN----SGPDTNGSQFF 401 (456)
Q Consensus 332 ~~~s~~~rv~~iwN~i~~~q~Gd-~~~~g~g~~~~~g~~-----~~~e~~~~~~h~~~G~l~ma~----~~~~~~~sqFf 401 (456)
|+++.|||+++ ++++ |||| +.++|+||+++||.. |+ | +.++|.++|+||||| ++||+||||||
T Consensus 76 Y~gt~FHRVi~--~Fmi--QgGd~~~g~G~Gg~siyg~~~~p~~f~-~--~~l~h~~~G~lsMAn~~~~~gpntngSQFF 148 (234)
T 2ose_A 76 YEGCKFHNVLH--NNYI--VSGDIYNSNGSSAGTVYCDEPIPPVFG-D--YFYPHESKGLLSLVPYTDESGNRYYDSTFM 148 (234)
T ss_dssp STTCBCCEEET--TTEE--EECCCC----CCCCCTTTTCCBCCCCC-S--CCCCSCSTTEEEECCEECTTSCEEBCSCEE
T ss_pred ECCcEEEEEEC--CCEE--EcCCccCCCCCCCccccCCccCccccc-C--cCccCCCCCEEEEecccccCCCCCccceEE
Confidence 67777888776 7777 8888 468888888888887 55 3 578998899999999 88999999999
Q ss_pred EEeCC------CCCCCCCccEEEEEEcCHHHHHHhhcCCCCCCCCCCcccEEEEEEEeec
Q psy1031 402 ITLAP------TQWLDGKHAIFGRIYSGMSVVKRIGLVETDKNDRPVDDVKILKTHVRNT 455 (456)
Q Consensus 402 I~~~~------~~~ld~~~~vfG~V~~G~~~l~~i~~~~~~~~~~P~~~i~I~~~~v~~~ 455 (456)
|++++ ++|||++|+|||+|++|||||++|++++++.+++|.++|+|.+|+++++
T Consensus 149 It~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~ 208 (234)
T 2ose_A 149 ITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYLD 208 (234)
T ss_dssp EESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECCC
T ss_pred EEecCccccCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEecC
Confidence 99999 9999999999999999999999999999998899999999999999864
No 32
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=1e-35 Score=267.59 Aligned_cols=84 Identities=33% Similarity=0.552 Sum_probs=75.8
Q ss_pred cccccccccccccCcceEEeec-cCCCCCcceEEEEeCCCCCCCCC--------ccEEEEEEcCHHHHHHhhcCCCCC--
Q psy1031 369 TFADEIHEELKHTGAGILSMAN-SGPDTNGSQFFITLAPTQWLDGK--------HAIFGRIYSGMSVVKRIGLVETDK-- 437 (456)
Q Consensus 369 ~~~~e~~~~~~h~~~G~l~ma~-~~~~~~~sqFfI~~~~~~~ld~~--------~~vfG~V~~G~~~l~~i~~~~~~~-- 437 (456)
.+++|....++| .+|+||||| .+||+|||||||+++++++||++ |+|||+|++|||+|++|+++++++
T Consensus 71 ~~~~E~~~~l~~-~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~ 149 (167)
T 3s6m_A 71 PIANEANNGLKN-DTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKG 149 (167)
T ss_dssp CBCCCGGGCCCC-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC--
T ss_pred ccCCcccccccC-CccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCc
Confidence 455665556777 499999999 56999999999999999999998 999999999999999999999987
Q ss_pred --CCCCCcccEEEEEEEe
Q psy1031 438 --NDRPVDDVKILKTHVR 453 (456)
Q Consensus 438 --~~~P~~~i~I~~~~v~ 453 (456)
+++|+++|+|.+|+|+
T Consensus 150 ~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 150 FHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp -CBTCBSSCCEEEEEEEC
T ss_pred ccCCCcCCCeEEEEEEEC
Confidence 6899999999999985
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=5.1e-36 Score=268.44 Aligned_cols=87 Identities=31% Similarity=0.512 Sum_probs=77.4
Q ss_pred cccccccccccccccCcceEEeecc-CCCCCcceEEEEeCCCCCCCCC--------ccEEEEEEcCHHHHHHhhcCCCCC
Q psy1031 367 GKTFADEIHEELKHTGAGILSMANS-GPDTNGSQFFITLAPTQWLDGK--------HAIFGRIYSGMSVVKRIGLVETDK 437 (456)
Q Consensus 367 g~~~~~e~~~~~~h~~~G~l~ma~~-~~~~~~sqFfI~~~~~~~ld~~--------~~vfG~V~~G~~~l~~i~~~~~~~ 437 (456)
|..++||....++|. +|+|||||. +||+++|||||+++++++||++ |+|||+|++|||+|++|++++++.
T Consensus 65 g~~~~dE~~~~l~~~-~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~ 143 (164)
T 1lop_A 65 KEPIKNEANNGLKNT-RGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGR 143 (164)
T ss_dssp CCCBCCCCCSSCCCC-TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEE
T ss_pred CCccccccccccccC-ccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCC
Confidence 345667765567885 999999985 6999999999999999999998 999999999999999999999875
Q ss_pred ----CCCCCcccEEEEEEEee
Q psy1031 438 ----NDRPVDDVKILKTHVRN 454 (456)
Q Consensus 438 ----~~~P~~~i~I~~~~v~~ 454 (456)
+++|.++|+|.+|+|++
T Consensus 144 ~~~~~~~P~~~v~I~~~~v~~ 164 (164)
T 1lop_A 144 SGMHQDVPKEDVIIESVTVSE 164 (164)
T ss_dssp ETTEEEEESSCCEEEEEEECC
T ss_pred ccccCCCcCCCeEEEEEEEeC
Confidence 47999999999999974
No 34
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=2.8e-35 Score=264.12 Aligned_cols=85 Identities=34% Similarity=0.559 Sum_probs=75.4
Q ss_pred cccccccccccccCcceEEeecc-CCCCCcceEEEEeCCCCCCCCC-----ccEEEEEEcCHHHHHHhhcCCCCC----C
Q psy1031 369 TFADEIHEELKHTGAGILSMANS-GPDTNGSQFFITLAPTQWLDGK-----HAIFGRIYSGMSVVKRIGLVETDK----N 438 (456)
Q Consensus 369 ~~~~e~~~~~~h~~~G~l~ma~~-~~~~~~sqFfI~~~~~~~ld~~-----~~vfG~V~~G~~~l~~i~~~~~~~----~ 438 (456)
.+++|....++|. +|+|||||. +||+|||||||+++++++||++ |+|||+|++|||+|++|+++++++ +
T Consensus 72 ~~~dE~~~~l~~~-~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~ 150 (166)
T 1v9t_A 72 PIKNEADNGLRNT-RGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQ 150 (166)
T ss_dssp CBCCCGGGSCCCC-TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEE
T ss_pred cccccccccccCC-ceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccC
Confidence 3556655556665 999999997 5999999999999999999998 999999999999999999999876 4
Q ss_pred CCCCcccEEEEEEEee
Q psy1031 439 DRPVDDVKILKTHVRN 454 (456)
Q Consensus 439 ~~P~~~i~I~~~~v~~ 454 (456)
++|.++|+|.+|+|++
T Consensus 151 ~~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 151 NVPSKPVVILSATVLP 166 (166)
T ss_dssp EEESSCCBEEEEEECC
T ss_pred CCcCCCeEEEEEEEeC
Confidence 7899999999999974
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=1e-33 Score=287.14 Aligned_cols=117 Identities=44% Similarity=0.685 Sum_probs=102.8
Q ss_pred cCCccceeeeeccceeecCcCCCCC-CCCCCCcccccccccccccccccccCcceEEeeccCCCCCcceEEEEeCCCCCC
Q psy1031 332 GEFSPIQRMEKIGNHITSGAGGDPT-GTGRGGSSIYGKTFADEIHEELKHTGAGILSMANSGPDTNGSQFFITLAPTQWL 410 (456)
Q Consensus 332 ~~~s~~~rv~~iwN~i~~~q~Gd~~-~~g~g~~~~~g~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~sqFfI~~~~~~~l 410 (456)
|+++.|||+++ ++++ ||||++ ++|+||+++||..|+||. +.++|+.+|+|||||.+||+||||||||++++++|
T Consensus 68 y~~~~fhrv~~--~f~~--q~Gd~~~~~g~g~~~~~~~~~~~e~-~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~l 142 (370)
T 1ihg_A 68 FKGCPFHRIIK--KFMI--QGGDFSNQNGTGGESIYGEKFEDEN-FHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHL 142 (370)
T ss_dssp CTTCBEEEEET--TTEE--EECCTTTSSSSCCCBTTBSCBCCCC-CCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGG
T ss_pred eCCcEeEEEEC--CcEE--ECCCCCCCCCCCCCCCCCCCcCCCc-CCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCccc
Confidence 34444455444 4555 677777 778899999999999996 68999999999999999999999999999999999
Q ss_pred CCCccEEEEEEcCHHHHHHhhcCCCCCCCCCCcccEEEEEEEee
Q psy1031 411 DGKHAIFGRIYSGMSVVKRIGLVETDKNDRPVDDVKILKTHVRN 454 (456)
Q Consensus 411 d~~~~vfG~V~~G~~~l~~i~~~~~~~~~~P~~~i~I~~~~v~~ 454 (456)
|++|+|||+|++||++|++|++++++. ++|..+|+|.+|+++.
T Consensus 143 d~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P~~~v~I~~~g~l~ 185 (370)
T 1ihg_A 143 DGKHVVFGQVIKGMGVAKILENVEVKG-EKPAKLCVIAECGELK 185 (370)
T ss_dssp TTTSCEEEEEEECHHHHHHHHTSCEET-TEESSCEEEEEEEEEC
T ss_pred CCCceEEEEEecCHHHHHHHHcCCCCC-CccceeEEEEEEEEec
Confidence 999999999999999999999999886 8999999999999985
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.96 E-value=1.4e-29 Score=250.64 Aligned_cols=83 Identities=24% Similarity=0.381 Sum_probs=70.6
Q ss_pred cccccccccccc----cccccccCcceEEeecc--CCCCCcceEEEEe-------CCCCCCCCCccEEEEEEcCHHHHHH
Q psy1031 363 SSIYGKTFADEI----HEELKHTGAGILSMANS--GPDTNGSQFFITL-------APTQWLDGKHAIFGRIYSGMSVVKR 429 (456)
Q Consensus 363 ~~~~g~~~~~e~----~~~~~h~~~G~l~ma~~--~~~~~~sqFfI~~-------~~~~~ld~~~~vfG~V~~G~~~l~~ 429 (456)
.++|+..+++|. .+.++|+.+|+|||||+ +||+|||||||++ ++.++||++|+|||+|++|||||++
T Consensus 262 ~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdk 341 (369)
T 3rfy_A 262 TPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLAD 341 (369)
T ss_dssp CSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGG
T ss_pred CCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCeeEEEEEecCHHHHHH
Confidence 456777777763 35788888999999998 7999999999999 4689999999999999999999999
Q ss_pred hhcCCCCCCCCCCcccEEEEEEEeecC
Q psy1031 430 IGLVETDKNDRPVDDVKILKTHVRNTL 456 (456)
Q Consensus 430 i~~~~~~~~~~P~~~i~I~~~~v~~~~ 456 (456)
|++.+ +|.+++|++++
T Consensus 342 I~~GD-----------~I~sv~I~~g~ 357 (369)
T 3rfy_A 342 LKVGD-----------VIESIQVVSGL 357 (369)
T ss_dssp CCTTC-----------EEEEEEEEECG
T ss_pred HhCCC-----------ceEEEEEecCC
Confidence 98742 48888887764
No 37
>3fsi_A RT, reverse transcriptase domain; transferase/DNA MMLV RT, protein-DNA complex, drug-DNA complex; HET: OWL; 1.75A {Moloney murine leukemia virus} SCOP: e.8.1.2 PDB: 1d1u_A 1n4l_A* 1ztt_A 2fjv_A* 2fjw_A 2fjx_A* 2fvp_A 2fvq_A 2fvr_A 2fvs_A 2r2r_A* 2r2s_A* 2r2t_A* 2r2u_A* 1ztw_A* 1i6j_A 1qaj_A* 1d0e_A* 1nnd_A 1mml_A ...
Probab=91.67 E-value=0.12 Score=48.46 Aligned_cols=93 Identities=14% Similarity=0.095 Sum_probs=62.1
Q ss_pred eecceEEEEEecCCCCchhhhhHHHhhhcc------cccceeeeeecceeEEeeccCCCccccchhhhhhhccccccCCc
Q psy1031 58 HNMGEIIVELYWKHAPNTCRNFAELCRRNY------YNGIKFHRIIRDFMIQAMGVGGASNVNQLQDVIQNLHCWCNENL 131 (456)
Q Consensus 58 t~~G~i~~~L~~~~~P~t~~nf~~l~~~~~------y~~~~f~rvi~df~iq~~g~g~~s~~~~Lq~~l~~l~~W~~~~~ 131 (456)
|+.|...+..-+-..-.+...|..+...-+ +.+.....++||+++.+. ........+..+.++..++|
T Consensus 155 t~~g~y~~~~mPfGl~~sP~~fq~~m~~il~~~~~~~~~~~v~~Y~DDili~s~------~~eeh~~~l~~v~~~L~~~g 228 (255)
T 3fsi_A 155 GISGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAAT------SELDCQQGTRALLQTLGNLG 228 (255)
T ss_dssp CCSSEEEESBCCTTCTTHHHHHHHHHHHHTHHHHHHCTTCEEEEETTEEEEEES------SHHHHHHHHHHHHHHHHHHT
T ss_pred CccceEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHhCcCcEEEEEcCCeEEEeC------CHHHHHHHHHHHHHHHHHCC
Confidence 566766655555555445555544332211 234466778899888742 23345667888999999999
Q ss_pred eeeecCCeEEEEeecCCCCceeeeEecCeEEeeeeeeeeeEEEecCC
Q psy1031 132 MVLNLEKCKVMSFYTNKHPILINYNINNVQLERVNNIKDLGVTFQYN 178 (456)
Q Consensus 132 L~~n~~Kt~~~~f~~~~~~~~~~~~i~g~~I~~~~~~kyLGV~ld~~ 178 (456)
|.+|++||++.. ++++|||..++++
T Consensus 229 l~l~~~Kc~f~~----------------------~~~~fLG~~i~~~ 253 (255)
T 3fsi_A 229 YRASAKKAQICQ----------------------KQVKYLGYLLKEG 253 (255)
T ss_dssp CCBCTTTCEEEE----------------------SEEEETTEEEETT
T ss_pred eEECHHHhcccC----------------------CceEEEEEEEeCC
Confidence 999999998542 4678999988864
No 38
>1rw3_A POL polyprotein; RNA and DNA dependent DNA polymerase, reverse transcriptase, transferase, replication; 3.00A {Moloney murine leukemia virus} SCOP: e.8.1.2
Probab=77.85 E-value=0.92 Score=46.16 Aligned_cols=92 Identities=13% Similarity=0.095 Sum_probs=56.0
Q ss_pred ecceEEEEEecCCCCchhhhhHHHhh---hcc---cccceeeeeecceeEEeeccCCCccccchhhhhhhccccccCCce
Q psy1031 59 NMGEIIVELYWKHAPNTCRNFAELCR---RNY---YNGIKFHRIIRDFMIQAMGVGGASNVNQLQDVIQNLHCWCNENLM 132 (456)
Q Consensus 59 ~~G~i~~~L~~~~~P~t~~nf~~l~~---~~~---y~~~~f~rvi~df~iq~~g~g~~s~~~~Lq~~l~~l~~W~~~~~L 132 (456)
+.|.-.+..-+-..-.+...|..+.. ..+ +-+..+..++||.++.+. ........+..+..-+.++||
T Consensus 160 ~~g~y~~~~mpfGl~naP~~fq~~m~~~l~~~~~~~~~~~v~~YvDDili~s~------~~~e~~~~l~~v~~~l~~~gl 233 (455)
T 1rw3_A 160 ISGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAAT------SELDCQQGTRALLQTLGNLGY 233 (455)
T ss_dssp CCEEEEESBCCSSCTTHHHHHHHHHHHHHHHHHHTCTTCEEEEETTEEEEEES------SHHHHHHHHHHHHHHHHHHTC
T ss_pred CCceEEEEecCCCCCCcHHHHHHHHHHHHHHhhhhCCCceEEEEcCCEEEecC------CHHHHHHHHHHHHHHHHHcCC
Confidence 45655554444444344444443322 111 345667778999888742 123344556677777788899
Q ss_pred eeecCCeEEEEeecCCCCceeeeEecCeEEeeeeeeeeeEEEecCC
Q psy1031 133 VLNLEKCKVMSFYTNKHPILINYNINNVQLERVNNIKDLGVTFQYN 178 (456)
Q Consensus 133 ~~n~~Kt~~~~f~~~~~~~~~~~~i~g~~I~~~~~~kyLGV~ld~~ 178 (456)
.+|++||++. +++++|||.+++.+
T Consensus 234 ~l~~~K~~f~----------------------~~~~~fLG~~i~~~ 257 (455)
T 1rw3_A 234 RASAKKAQIC----------------------QKQVKYLGYLLKEG 257 (455)
T ss_dssp CBCGGGCCCS----------------------BSSCEETTEEESSS
T ss_pred ccCccchhhh----------------------ccceeEeeeeccCC
Confidence 9999999842 34678888887754
No 39
>2zd1_A Reverse transcriptase/ribonuclease H; P51/P66, hetero dimer, NNRTI, nonnucleoside inhibitor, AIDS, HIV, rilpivirine, diarylpyrimidine, DAPY, DNA recombination; HET: T27; 1.80A {Human immunodeficiency virus 1} PDB: 3is9_A* 3irx_A* 2ze2_A* 3bgr_A* 3qlh_A* 3klf_A* 3qo9_A* 1dlo_A 1bqm_A 2be2_A* 1s6q_A* 1s6p_A* 1s9g_A* 1suq_A* 2b5j_A* 2b6a_A* 2ban_A* 1s9e_A* 1hni_A* 1hnv_A* ...
Probab=67.35 E-value=3.7 Score=42.87 Aligned_cols=78 Identities=9% Similarity=-0.055 Sum_probs=48.6
Q ss_pred eecceEEEEEecCCCCchhhhhHHHhhhcc------cccceeeeeecceeEEeeccCCCccccchhhhhhhccccccCCc
Q psy1031 58 HNMGEIIVELYWKHAPNTCRNFAELCRRNY------YNGIKFHRIIRDFMIQAMGVGGASNVNQLQDVIQNLHCWCNENL 131 (456)
Q Consensus 58 t~~G~i~~~L~~~~~P~t~~nf~~l~~~~~------y~~~~f~rvi~df~iq~~g~g~~s~~~~Lq~~l~~l~~W~~~~~ 131 (456)
|+.|...+..-+-....+...|..+...-+ +.+..+..++||.++.+.. ........+..+.+.+.++|
T Consensus 141 t~~g~y~~~~mPfGl~nap~~fq~~m~~il~~~~~~~~~~~v~~Y~DDIli~s~~-----~~~eh~~~l~~v~~~l~~~g 215 (557)
T 2zd1_A 141 TPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFAAQNPDIVIYQYMDDLYVGSDL-----EIGQHRTKIEELRQHLLRWG 215 (557)
T ss_dssp SCCEEEEESBCCTTCTTHHHHHHHHHHHHHHHHHHTCTTEEEEEETTEEEEEECS-----CHHHHHHHHHHHHHHHHTTT
T ss_pred CCceEEEEEeeCCCCCCHHHHHHHHHHHHHHHhhhcCCCceEEEEecCEEEecCc-----hHHHHHHHHHHHHHHHHHcC
Confidence 466766655555554445555554433211 2334466788998887421 12334456778888889999
Q ss_pred eeeecCCeE
Q psy1031 132 MVLNLEKCK 140 (456)
Q Consensus 132 L~~n~~Kt~ 140 (456)
|.+|++||+
T Consensus 216 l~l~~~Kc~ 224 (557)
T 2zd1_A 216 LTTPDKKHQ 224 (557)
T ss_dssp CCCCCSCCS
T ss_pred CccChhhcC
Confidence 999999997
No 40
>2zd1_B P51 RT; P51/P66, hetero dimer, NNRTI, nonnucleoside inhibitor, AIDS, HIV, rilpivirine, diarylpyrimidine, DAPY, DNA recombination; HET: T27; 1.80A {Human immunodeficiency virus 1} SCOP: e.8.1.2 PDB: 2ykm_B* 2ykn_B* 2ze2_B* 3bgr_B* 3ig1_B* 3irx_B* 3is9_B* 3qo9_B* 3v4i_B* 3v6d_B* 3v81_B* 3klf_B* 3kk1_B* 3kjv_B* 3kk2_B* 3kk3_B* 2be2_B* 1n5y_B* 1bqm_B* 1n6q_B* ...
Probab=54.32 E-value=4 Score=41.09 Aligned_cols=79 Identities=9% Similarity=-0.061 Sum_probs=38.0
Q ss_pred eecceEEEEEecCCCCchhhhhHHHhhhcc------cccceeeeeecceeEEeeccCCCccccchhhhhhhccccccCCc
Q psy1031 58 HNMGEIIVELYWKHAPNTCRNFAELCRRNY------YNGIKFHRIIRDFMIQAMGVGGASNVNQLQDVIQNLHCWCNENL 131 (456)
Q Consensus 58 t~~G~i~~~L~~~~~P~t~~nf~~l~~~~~------y~~~~f~rvi~df~iq~~g~g~~s~~~~Lq~~l~~l~~W~~~~~ 131 (456)
|+.|...+..-+-..-.+...|..+...-+ +.+..+..++||.++.+.. ....-...+..+.+-+.++|
T Consensus 139 t~~g~y~~~vmPfGl~nsPa~fq~~m~~il~~~~~~~~~~~v~vY~DDIlI~s~~-----~~~eh~~~l~~v~~~l~~~g 213 (428)
T 2zd1_B 139 TPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDL-----EIGQHRTKIEELRQHLLRWG 213 (428)
T ss_dssp SCCEEEEESBCCTTCTHHHHHHHHHHHHHHHHHHHHCTTCEEEEETTEEEEEECS-----CHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEeeCCCCcchHHHHHHHHHHHHHHHhhcCCCceEEEEecceEEecCC-----cHHHHHHHHHHHHHHHHHhC
Confidence 455655554444444444444443332211 2233466788998887421 12233456666777778899
Q ss_pred eeeecCCeEE
Q psy1031 132 MVLNLEKCKV 141 (456)
Q Consensus 132 L~~n~~Kt~~ 141 (456)
|.+|++||+.
T Consensus 214 L~l~~~Kc~~ 223 (428)
T 2zd1_B 214 LTTPDKKHQK 223 (428)
T ss_dssp C---------
T ss_pred CccChhHccc
Confidence 9999999973
No 41
>1mu2_A HIV-2 RT; HIV-2 reverse transcriptase, AIDS, polymerase, drug design, transferase; 2.35A {Human immunodeficiency virus 2} SCOP: c.55.3.1 e.8.1.2 PDB: 1mu2_B
Probab=51.34 E-value=8.9 Score=39.86 Aligned_cols=76 Identities=13% Similarity=0.026 Sum_probs=43.4
Q ss_pred cceEEEEEecCCCCchhhhhHHHhhhcc------cccceeeeeecceeEEeeccCCCccccchhhhhhhccccccCCcee
Q psy1031 60 MGEIIVELYWKHAPNTCRNFAELCRRNY------YNGIKFHRIIRDFMIQAMGVGGASNVNQLQDVIQNLHCWCNENLMV 133 (456)
Q Consensus 60 ~G~i~~~L~~~~~P~t~~nf~~l~~~~~------y~~~~f~rvi~df~iq~~g~g~~s~~~~Lq~~l~~l~~W~~~~~L~ 133 (456)
.|...+..-+-....+...|..+...-+ +.+.....++||.++.+.. ....-...+..+.+-+.++||.
T Consensus 141 ~g~y~~~~mPfGl~napa~fq~~m~~il~~~~~~~~~~~v~~Y~DDIli~s~~-----~~~eh~~~l~~v~~~l~~~gl~ 215 (555)
T 1mu2_A 141 GKRYIYKVLPQGWKGSPAIFQHTMRQVLEPFRKANKDVIIIQYMDDILIASDR-----TDLEHDRVVLQLKELLNGLGFS 215 (555)
T ss_dssp -CEEEESBCCTTCTTHHHHHHHHHHHHHHHHHHHCTTSEEEEETTEEEEEECS-----CHHHHHHHHHHHHHHHHHTTCB
T ss_pred ceEEEEEEeCCCCCCcHHHHHHHHHHHHHHHHhhCCCcEEEEEecceEEecCC-----CHHHHHHHHHHHHHHHHHcCCc
Confidence 4554444444444344444444332211 2233466788998886421 1233445567777788889999
Q ss_pred eecCCeE
Q psy1031 134 LNLEKCK 140 (456)
Q Consensus 134 ~n~~Kt~ 140 (456)
+|++||+
T Consensus 216 l~~~K~~ 222 (555)
T 1mu2_A 216 TPDEKFQ 222 (555)
T ss_dssp CCSTTEE
T ss_pred cCHHHhc
Confidence 9999983
No 42
>3kyl_A Telomerase reverse transcriptase; reverse transcriptase; 2.70A {Tribolium castaneum} PDB: 3du5_A 3du6_A
Probab=42.60 E-value=10 Score=38.88 Aligned_cols=80 Identities=14% Similarity=0.107 Sum_probs=43.2
Q ss_pred ccceeeeeecceeEEeeccCCCccccchhhhhhhccccccCCceeeecCCeEEEEeecCCCCc----eeeeEecCeEEee
Q psy1031 89 NGIKFHRIIRDFMIQAMGVGGASNVNQLQDVIQNLHCWCNENLMVLNLEKCKVMSFYTNKHPI----LINYNINNVQLER 164 (456)
Q Consensus 89 ~~~~f~rvi~df~iq~~g~g~~s~~~~Lq~~l~~l~~W~~~~~L~~n~~Kt~~~~f~~~~~~~----~~~~~i~g~~I~~ 164 (456)
.+..+.|++|||++.+.... ..+..++.+..| +++|++||.+ .|.....+. -..+.|+..+++.
T Consensus 334 kd~~LVRYADDFVIi~~Ske------~Aerfl~~Lkg~-----leLNpEKTrI-nF~~~~lp~~~fpwCGLLIDtkTLEI 401 (596)
T 3kyl_A 334 KDAFIHRTVDDYFFCSPHPH------KVYDFELLIKGV-----YQVNPTKTRT-NLPTHRHPQDEIPYCGKIFNLTTRQV 401 (596)
T ss_dssp TTSEEEECSSEEEEEESCHH------HHHHHHHHHHHH-----SCEEEEEEEE-CCTTSSSCCSEEEETTEEEETTTCCE
T ss_pred cCceEEEEcCcEEEEECCHH------HHHHHHHHhhCc-----ceECchhcee-ecccccCCCceeeeeeEEEECCEEEE
Confidence 36789999999999964321 122333333334 3999999985 342221110 1123444444442
Q ss_pred -eeeeeeeEEEecCCCC
Q psy1031 165 -VNNIKDLGVTFQYNLK 180 (456)
Q Consensus 165 -~~~~kyLGV~ld~~L~ 180 (456)
.+.-+|.+..+.+.|+
T Consensus 402 ~kDySrya~~sIrsSLT 418 (596)
T 3kyl_A 402 RTLYKLPPNYEIRHKFK 418 (596)
T ss_dssp EECCCCCTTCBGGGSCC
T ss_pred EeChhhhccCccccccc
Confidence 2345556666666666
Done!