Query psy10312
Match_columns 73
No_of_seqs 19 out of 21
Neff 1.7
Searched_HMMs 13730
Date Fri Aug 16 23:17:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10312.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10312hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kv9a2 b.70.1.1 (A:1-560) Qui 54.6 1 7.5E-05 31.5 -0.4 24 16-39 483-506 (560)
2 d1kb0a2 b.70.1.1 (A:1-573) Qui 53.3 1.1 8.1E-05 31.3 -0.4 24 15-38 501-524 (573)
3 d1flga_ b.70.1.1 (A:) Ethanol 49.5 1.4 0.0001 30.9 -0.4 23 16-38 511-533 (582)
4 d2ad6a1 b.70.1.1 (A:1-571) Met 44.4 1.9 0.00014 30.4 -0.4 24 16-39 489-512 (571)
5 d1w6sa_ b.70.1.1 (A:) Methanol 36.5 2.9 0.00021 29.7 -0.4 24 16-39 498-521 (596)
6 d1m0sa2 d.58.40.1 (A:127-198) 27.1 9.4 0.00069 21.3 0.8 14 2-15 1-14 (72)
7 d1wija_ a.140.5.1 (A:) Ethylen 13.1 29 0.0021 22.2 0.9 32 6-38 30-62 (127)
8 d1gpia_ b.29.1.10 (A:) Cellobi 10.4 18 0.0013 27.0 -1.1 23 11-33 186-218 (431)
9 d1hnra_ a.155.1.1 (A:) H1 prot 9.9 43 0.0031 17.6 0.7 12 62-73 11-22 (47)
10 d1hqta_ c.1.7.1 (A:) Aldose re 8.6 55 0.004 20.3 1.0 11 53-63 15-26 (324)
No 1
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=54.59 E-value=1 Score=31.50 Aligned_cols=24 Identities=21% Similarity=0.362 Sum_probs=20.6
Q ss_pred eeccccchhhhHhhhhcCCCCCCC
Q psy10312 16 CCFIFTGTELWEANLRNGGQPPPQ 39 (73)
Q Consensus 16 ~~~~nnGTelWEaNLRNGGQpp~q 39 (73)
...+.||.+||+.+|-.+.+.+|.
T Consensus 483 A~Da~tGe~LW~~~l~~~~~~~P~ 506 (560)
T d1kv9a2 483 AYSADKGEALWQFEAQSGIVAAPM 506 (560)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCE
T ss_pred EEECCCCcEeEEEECCCCccccCE
Confidence 467899999999999999887773
No 2
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=53.30 E-value=1.1 Score=31.32 Aligned_cols=24 Identities=33% Similarity=0.505 Sum_probs=20.6
Q ss_pred ceeccccchhhhHhhhhcCCCCCC
Q psy10312 15 NCCFIFTGTELWEANLRNGGQPPP 38 (73)
Q Consensus 15 ~~~~~nnGTelWEaNLRNGGQpp~ 38 (73)
....+.||.+|||.+|..|.+.+|
T Consensus 501 ~A~Da~TGe~LW~~~~~~~~~~~P 524 (573)
T d1kb0a2 501 VAYHAATGEKLWEAPTGTGVVAAP 524 (573)
T ss_dssp EEEETTTCCEEEEEECSSCCCSCC
T ss_pred EEEECCCCcEeEEEECCCCccccC
Confidence 356889999999999999887776
No 3
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=49.47 E-value=1.4 Score=30.86 Aligned_cols=23 Identities=30% Similarity=0.515 Sum_probs=20.0
Q ss_pred eeccccchhhhHhhhhcCCCCCC
Q psy10312 16 CCFIFTGTELWEANLRNGGQPPP 38 (73)
Q Consensus 16 ~~~~nnGTelWEaNLRNGGQpp~ 38 (73)
...+.||.+|||.+|-.+++.+|
T Consensus 511 A~Da~TGe~LW~~~~~~~~~~~P 533 (582)
T d1flga_ 511 AFDAKSGKELWKFQTGSGIVSPP 533 (582)
T ss_dssp EEETTTCCEEEEEECSSCCCSCC
T ss_pred EEECCCCcEeEEEECCCCccccC
Confidence 35678999999999999988877
No 4
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=44.38 E-value=1.9 Score=30.38 Aligned_cols=24 Identities=29% Similarity=0.498 Sum_probs=20.1
Q ss_pred eeccccchhhhHhhhhcCCCCCCC
Q psy10312 16 CCFIFTGTELWEANLRNGGQPPPQ 39 (73)
Q Consensus 16 ~~~~nnGTelWEaNLRNGGQpp~q 39 (73)
.....||.+|||.+|-.+.+.+|.
T Consensus 489 A~Da~tGe~lW~~~l~~~~~a~P~ 512 (571)
T d2ad6a1 489 ALDNKDGKELWNFKMPSGGIGSPM 512 (571)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCE
T ss_pred EEECCCCcEEEEEECCCCceecce
Confidence 357789999999999999887763
No 5
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=36.51 E-value=2.9 Score=29.65 Aligned_cols=24 Identities=25% Similarity=0.301 Sum_probs=20.6
Q ss_pred eeccccchhhhHhhhhcCCCCCCC
Q psy10312 16 CCFIFTGTELWEANLRNGGQPPPQ 39 (73)
Q Consensus 16 ~~~~nnGTelWEaNLRNGGQpp~q 39 (73)
...+.||.+|||.+|-.+.+.+|.
T Consensus 498 A~Da~TGe~LW~~~~~~~~~a~P~ 521 (596)
T d1w6sa_ 498 ARDSDTGDLLWKFKIPSGAIGYPM 521 (596)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCE
T ss_pred EEECCCCcEeeEEECCCCcccCCe
Confidence 456889999999999999888873
No 6
>d1m0sa2 d.58.40.1 (A:127-198) D-ribose-5-phosphate isomerase (RpiA), lid domain {Haemophilus influenzae [TaxId: 727]}
Probab=27.09 E-value=9.4 Score=21.26 Aligned_cols=14 Identities=36% Similarity=0.714 Sum_probs=11.4
Q ss_pred CccccceeeccCCc
Q psy10312 2 GSRFRFPLEFLGAN 15 (73)
Q Consensus 2 ~~~~~~~~~~~g~~ 15 (73)
|++|-.|+|+.=..
T Consensus 1 G~kFPlPVEV~pf~ 14 (72)
T d1m0sa2 1 GSTFPLPVEVIPMA 14 (72)
T ss_dssp TSSSCEEEEECGGG
T ss_pred CCCCCEeEEEcHhH
Confidence 78999999987544
No 7
>d1wija_ a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=13.06 E-value=29 Score=22.15 Aligned_cols=32 Identities=34% Similarity=0.524 Sum_probs=21.7
Q ss_pred cceeeccCCceeccccchhhhHhhhh-cCCCCCC
Q psy10312 6 RFPLEFLGANCCFIFTGTELWEANLR-NGGQPPP 38 (73)
Q Consensus 6 ~~~~~~~g~~~~~~nnGTelWEaNLR-NGGQpp~ 38 (73)
|||||--=+++|= -||.|.|=..|+ ..+|+||
T Consensus 30 ~~Plekg~pPPWW-PtG~E~WW~~lg~~~~~~PP 62 (127)
T d1wija_ 30 KYPLEKGTPPPWW-PTGNEEWWVKLGLPKSQSPP 62 (127)
T ss_dssp SCCTTTCCHHHHC-CCSCCHHHHHHTCCTTCCCC
T ss_pred cCCCCCCCCcCCC-CCCCchhHHhcCCCCCCCCC
Confidence 7899865544442 579999988887 4456543
No 8
>d1gpia_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Phanerochaete chrysosporium, Cel7d [TaxId: 5306]}
Probab=10.37 E-value=18 Score=26.99 Aligned_cols=23 Identities=30% Similarity=0.254 Sum_probs=15.5
Q ss_pred ccCCceeccccch----------hhhHhhhhcC
Q psy10312 11 FLGANCCFIFTGT----------ELWEANLRNG 33 (73)
Q Consensus 11 ~~g~~~~~~nnGT----------elWEaNLRNG 33 (73)
+-||.+...|.|+ +|||||-|.-
T Consensus 186 v~gw~~~~~n~g~g~~GsCC~EmDIwEANs~a~ 218 (431)
T d1gpia_ 186 VGNWTETGSNTGTGSYGTCCSEMDIWEANNDAA 218 (431)
T ss_dssp CTTCEECSSSCEECSCEEECCEEEEEEEETTEE
T ss_pred cccccccccccccCCccccccchhhhhhhcccc
Confidence 4466666666554 7999998753
No 9
>d1hnra_ a.155.1.1 (A:) H1 protein (H-NS) {Escherichia coli [TaxId: 562]}
Probab=9.87 E-value=43 Score=17.64 Aligned_cols=12 Identities=33% Similarity=0.332 Sum_probs=7.9
Q ss_pred CCCCCCCcccCC
Q psy10312 62 DEGESIPLETGR 73 (73)
Q Consensus 62 Dd~~~~~vWtG~ 73 (73)
|++.+..-||||
T Consensus 11 ~~~g~~~tWTGr 22 (47)
T d1hnra_ 11 DENGETKTWTGQ 22 (47)
T ss_dssp CSSCCCEECCTT
T ss_pred CCCCCcceeecC
Confidence 344566778886
No 10
>d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=8.59 E-value=55 Score=20.27 Aligned_cols=11 Identities=45% Similarity=0.945 Sum_probs=7.2
Q ss_pred CCC-CccccCCC
Q psy10312 53 NIG-GTWGEDDE 63 (73)
Q Consensus 53 N~G-GTWGeDDd 63 (73)
.+| |||+-||+
T Consensus 15 ~lglGtw~~~~~ 26 (324)
T d1hqta_ 15 LIGLGTWKSEPG 26 (324)
T ss_dssp SBCBBCTTCCTT
T ss_pred hheeECCCCCHH
Confidence 455 78887665
Done!