BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy10312
MGSRFRFPLEFLGANCCFIFTGTELWEANLRNGGQPPPQVAQKTPWGHTPATNIGGTWGE
DDEGESIPLETGR

High Scoring Gene Products

Symbol, full name Information P value
gw
gawky 		protein from Drosophila melanogaster 1.1e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy10312
        (73 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0051992 - symbol:gw "gawky" species:7227 "Drosophi...   192  1.1e-13   1


>FB|FBgn0051992 [details] [associations]
            symbol:gw "gawky" species:7227 "Drosophila melanogaster"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0035195 "gene silencing by
            miRNA" evidence=IMP] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=IMP]
            [GO:0000932 "cytoplasmic mRNA processing body" evidence=IDA]
            [GO:0001700 "embryonic development via the syncytial blastoderm"
            evidence=IDA] [GO:0006402 "mRNA catabolic process" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0032880 "regulation
            of protein localization" evidence=IMP] InterPro:IPR000449
            InterPro:IPR000504 InterPro:IPR009060 InterPro:IPR012677
            InterPro:IPR026804 Pfam:PF00627 PROSITE:PS50102 SMART:SM00360
            GO:GO:0006417 GO:GO:0001700 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0032880 GO:GO:0003723 InterPro:IPR015940 PROSITE:PS50030
            GO:GO:0000932 GO:GO:0006402 GO:GO:0035195 EMBL:AE014135
            SUPFAM:SSF46934 EMBL:AY075429 EMBL:AY118860 RefSeq:NP_001014691.1
            RefSeq:NP_001014692.1 RefSeq:NP_726596.1 RefSeq:NP_726597.1
            RefSeq:NP_726598.1 RefSeq:NP_726599.1 RefSeq:NP_726600.1
            RefSeq:NP_726601.1 UniGene:Dm.1403 PDB:2WBR PDBsum:2WBR
            ProteinModelPortal:Q8SY33 SMR:Q8SY33 DIP:DIP-35525N IntAct:Q8SY33
            MINT:MINT-764572 STRING:Q8SY33 PRIDE:Q8SY33
            EnsemblMetazoa:FBtr0089096 EnsemblMetazoa:FBtr0089097
            EnsemblMetazoa:FBtr0089100 EnsemblMetazoa:FBtr0089101 GeneID:43808
            KEGG:dme:Dmel_CG31992 UCSC:CG31992-RA CTD:43808 FlyBase:FBgn0051992
            GeneTree:ENSGT00410000025966 InParanoid:Q8SY33 OMA:QYRILVE
            PhylomeDB:Q8SY33 ChiTaRS:gw EvolutionaryTrace:Q8SY33
            GenomeRNAi:43808 NextBio:835971 Bgee:Q8SY33 InterPro:IPR019486
            InterPro:IPR026805 PANTHER:PTHR31070 Pfam:PF10427 Pfam:PF12938
            Uniprot:Q8SY33
        Length = 1384

 Score = 192 (72.6 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 34/55 (61%), Positives = 42/55 (76%)

Query:    19 IFTGTELWEANLRNGGQPPPQVAQKTPWGHTPATNIGGTWGEDDEG-ESIPLETG 72
             I  GT+LWE+NLRNGGQP  Q   K  WGHTP++N+GGTWGEDD+G +S  + TG
Sbjct:    45 INNGTDLWESNLRNGGQPAAQQVPKPSWGHTPSSNLGGTWGEDDDGADSSSVWTG 99


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.140   0.478    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       73        73   0.00091  102 3  12 22  0.43    29
                                                     29  0.45    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  487 (52 KB)
  Total size of DFA:  87 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.38u 0.15s 7.53t   Elapsed:  00:00:00
  Total cpu time:  7.38u 0.15s 7.53t   Elapsed:  00:00:00
  Start:  Thu Aug 15 15:45:21 2013   End:  Thu Aug 15 15:45:21 2013

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