Query psy10314
Match_columns 233
No_of_seqs 176 out of 1240
Neff 9.0
Searched_HMMs 13730
Date Fri Aug 16 23:20:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10314.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10314hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2jdig1 c.49.2.1 (G:1-272) ATP 31.4 2.4 0.00018 32.0 -1.8 11 147-157 75-85 (272)
2 d1fs0g_ c.49.2.1 (G:) ATP synt 30.9 2.4 0.00018 31.2 -1.8 11 147-157 67-77 (230)
3 d1p5dx4 d.129.2.1 (X:368-463) 24.1 58 0.0042 19.8 4.5 36 23-62 33-68 (96)
4 d1uoya_ g.3.19.1 (A:) Bubble p 20.6 14 0.001 20.6 0.7 8 1-8 37-44 (64)
5 d2gu2a1 c.56.5.7 (A:4-310) Asp 19.9 24 0.0017 27.0 2.1 20 22-41 254-273 (307)
6 d1gl0i_ g.4.1.1 (I:) Protease 17.2 38 0.0027 16.0 1.7 12 4-15 20-31 (32)
7 d1saca_ b.29.1.5 (A:) Serum am 15.8 57 0.0041 22.3 3.4 35 29-63 4-40 (204)
8 d2eppa1 g.37.1.1 (A:286-338) P 14.0 18 0.0013 19.4 0.0 8 146-153 8-15 (53)
9 d1g26a_ g.3.16.1 (A:) N-termin 14.0 41 0.0029 15.9 1.3 10 3-12 20-29 (31)
10 d2cora2 g.39.1.3 (A:8-42) Pinc 12.9 35 0.0026 16.8 0.9 13 217-229 10-22 (35)
No 1
>d2jdig1 c.49.2.1 (G:1-272) ATP synthase (F1-ATPase), gamma subunit {Cow (Bos taurus) [TaxId: 9913]}
Probab=31.45 E-value=2.4 Score=32.00 Aligned_cols=11 Identities=36% Similarity=0.942 Sum_probs=9.0
Q ss_pred ccceeecCCCC
Q psy10314 147 KGLCGNYNDNE 157 (233)
Q Consensus 147 ~GLCGn~ng~~ 157 (233)
.||||.||.+-
T Consensus 75 rGLcG~fN~~i 85 (272)
T d2jdig1 75 RGLCGAIHSSV 85 (272)
T ss_dssp CCCSTTHHHHH
T ss_pred CCCCCCccccH
Confidence 49999999665
No 2
>d1fs0g_ c.49.2.1 (G:) ATP synthase (F1-ATPase), gamma subunit {Escherichia coli [TaxId: 562]}
Probab=30.92 E-value=2.4 Score=31.21 Aligned_cols=11 Identities=55% Similarity=0.993 Sum_probs=8.8
Q ss_pred ccceeecCCCC
Q psy10314 147 KGLCGNYNDNE 157 (233)
Q Consensus 147 ~GLCGn~ng~~ 157 (233)
.||||.||.+-
T Consensus 67 rGLCG~~Ns~i 77 (230)
T d1fs0g_ 67 RGLCGGLNINL 77 (230)
T ss_dssp SSCSTTHHHHH
T ss_pred cccccccchhH
Confidence 48999999654
No 3
>d1p5dx4 d.129.2.1 (X:368-463) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=24.13 E-value=58 Score=19.82 Aligned_cols=36 Identities=22% Similarity=0.425 Sum_probs=26.0
Q ss_pred CCeeeccCCCeeeeecCceEEEEEecCCCCCCceEEEEEE
Q psy10314 23 DSHFQTFDAKNFDFQGACEYVLVKGANEEEEEAFVVVIEV 62 (233)
Q Consensus 23 ~~h~~TFDg~~y~f~g~C~YvL~~~~~~~~~~~f~V~~~~ 62 (233)
+..+.|.||..+.|.. . .+|++... +.+-+.|.++-
T Consensus 33 ~~~i~~iDGvrv~~~d-g-W~liR~Sn--TEP~lri~~Ea 68 (96)
T d1p5dx4 33 EGNITTLDGVRVDYPK-G-WGLVRASN--TTPVLVLRFEA 68 (96)
T ss_dssp SSEEECSSSEEEEETT-E-EEEEEECS--SSSEEEEEEEE
T ss_pred cCceeeecceEEEecc-c-EEEEEeCC--CCCEEEEEEEE
Confidence 3468899999999975 2 88888643 35666776654
No 4
>d1uoya_ g.3.19.1 (A:) Bubble protein {Penicillium brevicompactum [TaxId: 5074]}
Probab=20.64 E-value=14 Score=20.55 Aligned_cols=8 Identities=38% Similarity=1.332 Sum_probs=6.7
Q ss_pred CCCCceee
Q psy10314 1 TCSQGHWK 8 (233)
Q Consensus 1 ~C~~g~w~ 8 (233)
.|.+|+|+
T Consensus 37 ECrgGkWT 44 (64)
T d1uoya_ 37 ECKGGKWT 44 (64)
T ss_dssp EEETTEEE
T ss_pred EecCCceE
Confidence 38899998
No 5
>d2gu2a1 c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=19.93 E-value=24 Score=27.04 Aligned_cols=20 Identities=35% Similarity=0.732 Sum_probs=18.0
Q ss_pred CCCeeeccCCCeeeeecCce
Q psy10314 22 GDSHFQTFDAKNFDFQGACE 41 (233)
Q Consensus 22 G~~h~~TFDg~~y~f~g~C~ 41 (233)
|||-|.||||....|.|...
T Consensus 254 GdplF~~~dG~~i~~~g~~~ 273 (307)
T d2gu2a1 254 GDPVFVSLDGKVIPLGGDCT 273 (307)
T ss_dssp TSEEEECTTCCEEECCSSSC
T ss_pred CCceEecCCCCEEEecCCCc
Confidence 89999999999999998664
No 6
>d1gl0i_ g.4.1.1 (I:) Protease inhibitor PMP-D2V {Migratory locust (Locusta migratoria) [TaxId: 7004]}
Probab=17.23 E-value=38 Score=16.02 Aligned_cols=12 Identities=33% Similarity=1.030 Sum_probs=9.8
Q ss_pred CceeeeecCCCC
Q psy10314 4 QGHWKCSKEECP 15 (233)
Q Consensus 4 ~g~w~C~~~~c~ 15 (233)
.|.|.|+..-|+
T Consensus 20 tgvw~ct~~gc~ 31 (32)
T d1gl0i_ 20 TGVWGCTLMGCQ 31 (32)
T ss_dssp TSCEEEECCCCC
T ss_pred CcEEEEEecccC
Confidence 688999987775
No 7
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.80 E-value=57 Score=22.34 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=24.5
Q ss_pred cCCCeeeee--cCceEEEEEecCCCCCCceEEEEEEe
Q psy10314 29 FDAKNFDFQ--GACEYVLVKGANEEEEEAFVVVIEVV 63 (233)
Q Consensus 29 FDg~~y~f~--g~C~YvL~~~~~~~~~~~f~V~~~~~ 63 (233)
-+|+.|.|+ +...|+-+......+...|+|.+-..
T Consensus 4 l~gkaf~F~~~~~~dYv~l~~~~~~~~~~fTvs~Wvk 40 (204)
T d1saca_ 4 LSGKVFVFPRESVTDHVNLITPLEKPLQNFTLCFRAY 40 (204)
T ss_dssp CTTEEEEECSCCSSCEEEECCCCCSCBSEEEEEEEEE
T ss_pred CCCCEEECCCCCCCcEEEeCCCCCCCCCCEEEEEEEE
Confidence 479999995 67789977654332346888877664
No 8
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.05 E-value=18 Score=19.35 Aligned_cols=8 Identities=50% Similarity=0.991 Sum_probs=6.1
Q ss_pred cccceeec
Q psy10314 146 VKGLCGNY 153 (233)
Q Consensus 146 ~~GLCGn~ 153 (233)
-|||||..
T Consensus 8 pCG~CgK~ 15 (53)
T d2eppa1 8 PCGLCGKV 15 (53)
T ss_dssp CCTTTCCC
T ss_pred eccccccc
Confidence 38999875
No 9
>d1g26a_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.98 E-value=41 Score=15.89 Aligned_cols=10 Identities=30% Similarity=0.886 Sum_probs=6.1
Q ss_pred CCceeeeecC
Q psy10314 3 SQGHWKCSKE 12 (233)
Q Consensus 3 ~~g~w~C~~~ 12 (233)
+.|.|.|-+.
T Consensus 20 ~sGaWgCCPf 29 (31)
T d1g26a_ 20 PSGAWGCCPF 29 (31)
T ss_dssp TTSCEEEEEC
T ss_pred cCCceeeccC
Confidence 3577777543
No 10
>d2cora2 g.39.1.3 (A:8-42) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.93 E-value=35 Score=16.79 Aligned_cols=13 Identities=23% Similarity=0.560 Sum_probs=9.2
Q ss_pred CCcCCcCCCCCcc
Q psy10314 217 LFQPCHSEVPVDS 229 (233)
Q Consensus 217 ~F~~Ch~~v~p~~ 229 (233)
.=..||.+||-+|
T Consensus 10 vC~KCh~iIdd~p 22 (35)
T d2cora2 10 ICQKCHAIIDEQP 22 (35)
T ss_dssp BCTTTCCBCCSCC
T ss_pred HHHHHHhhhhcCc
Confidence 3457899887655
Done!