BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10320
(262 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/185 (71%), Positives = 158/185 (85%), Gaps = 5/185 (2%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLP+GVRERDLEKF KG+GRIRD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
LLGERV VE A+GIDRS +R RRG Y R G G R + YGPPTR+++RLIVEN
Sbjct: 61 ELLGERVVVEPARGIDRSADRYRRGDRHYE----RSGGGRSRYE-YGPPTRTEYRLIVEN 115
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+SSR+SWQDLKD+MRQ GEV YADAHK+HRNEGVVEF + SDM+ A++KLD ELNGRR+
Sbjct: 116 VSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTELNGRRV 175
Query: 181 RLIED 185
RL+ED
Sbjct: 176 RLVED 180
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 131/196 (66%), Positives = 155/196 (79%), Gaps = 24/196 (12%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLP+GVRERDLEKF KG+GRIRD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQER-----------GRRGYGSYRAPPPRRGWGHDRDDRYGPP 109
LLGERV VE A+GIDRS +R GR Y Y + RYGPP
Sbjct: 61 ELLGERVVVEPARGIDRSADRYRRDRYYERDRGRSRYDDY-------------NYRYGPP 107
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDK 169
TR+++RLIVENLSSR+SWQDLKD+MRQ GEV YADAHK+HRNEGVVEF + SDM+ A++K
Sbjct: 108 TRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEK 167
Query: 170 LDNAELNGRRIRLIED 185
LD ELNGRR+RL+ED
Sbjct: 168 LDGTELNGRRVRLVED 183
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/207 (65%), Positives = 156/207 (75%), Gaps = 22/207 (10%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVGT+VY+GGLPYG RERDLE+F +GYGR RDV++KNG+GFVEF+DYRDADDAVYELNGK
Sbjct: 54 MVGTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGK 113
Query: 61 SLLGERVTVEIAKGIDRSQERGRRG-----YGSYRAPPPRRGWGHDRDD----------- 104
LLGER+TVE A+G R ++ R G YG R R HDRD
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSA-RDDMRHDRDSVNRNTRTASSY 172
Query: 105 -----RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFES 159
RYGPPTR+++RL VENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF +
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFAT 232
Query: 160 SSDMKKALDKLDNAELNGRRIRLIEDK 186
SD+K A+DKLD+ ELNGRRIRLIEDK
Sbjct: 233 YSDLKNAIDKLDDTELNGRRIRLIEDK 259
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/207 (65%), Positives = 156/207 (75%), Gaps = 22/207 (10%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVGT+VY+GGLPYG RERDLE+F +GYGR RDV++KNG+GFVEF+DYRDADDAVYELNGK
Sbjct: 54 MVGTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGK 113
Query: 61 SLLGERVTVEIAKGIDRSQERGRRG-----YGSYRAPPPRRGWGHDRDD----------- 104
LLGER+TVE A+G R ++ R G YG R R HDRD
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSA-RDDMRHDRDSVNRNTRTASSY 172
Query: 105 -----RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFES 159
RYGPPTR+++RL VENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF +
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFAT 232
Query: 160 SSDMKKALDKLDNAELNGRRIRLIEDK 186
SD+K A+DKLD+ ELNGRRIRLIEDK
Sbjct: 233 YSDLKNAIDKLDDTELNGRRIRLIEDK 259
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 135/207 (65%), Positives = 156/207 (75%), Gaps = 22/207 (10%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVGT+VY+GGLPYG RERDLE+F +GYGR RDV++KNG+GFVEF+DYRDADDAVYELNGK
Sbjct: 54 MVGTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGK 113
Query: 61 SLLGERVTVEIAKGIDRSQERGRRG-----YGSYRAPPPRRGWGHDRDD----------- 104
LLGER+TVE A+G R ++ R G YG R R HDRD
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSA-RDDMRHDRDSVNRNTRTASSY 172
Query: 105 -----RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFES 159
RYGPPTR+++RL VENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF +
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFAT 232
Query: 160 SSDMKKALDKLDNAELNGRRIRLIEDK 186
SD+K A+DKLD+ ELNGRRIRLIEDK
Sbjct: 233 YSDLKNAIDKLDDTELNGRRIRLIEDK 259
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 135/207 (65%), Positives = 156/207 (75%), Gaps = 22/207 (10%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVGT+VY+GGLPYG RERDLE+F +GYGR RDV++KNG+GFVEF+DYRDADDAVYELNGK
Sbjct: 54 MVGTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGK 113
Query: 61 SLLGERVTVEIAKGIDRSQERGRRG-----YGSYRAPPPRRGWGHDRDD----------- 104
LLGER+TVE A+G R ++ R G YG R R HDRD
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSA-RDDMRHDRDSVNRNTRTASSY 172
Query: 105 -----RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFES 159
RYGPPTR+++RL VENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF +
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFAT 232
Query: 160 SSDMKKALDKLDNAELNGRRIRLIEDK 186
SD+K A+DKLD+ ELNGRRIRLIEDK
Sbjct: 233 YSDLKNAIDKLDDTELNGRRIRLIEDK 259
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 135/207 (65%), Positives = 156/207 (75%), Gaps = 22/207 (10%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVGT+VY+GGLPYG RERDLE+F +GYGR RDV++KNG+GFVEF+DYRDADDAVYELNGK
Sbjct: 54 MVGTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGK 113
Query: 61 SLLGERVTVEIAKGIDRSQERGRRG-----YGSYRAPPPRRGWGHDRDD----------- 104
LLGER+TVE A+G R ++ R G YG R R HDRD
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSA-RDDMRHDRDSVNRNTRTASSY 172
Query: 105 -----RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFES 159
RYGPPTR+++RLIVENLSSRVSWQDLKD+MR GEV YADAHK+ RNEGVVEF +
Sbjct: 173 KQSLPRYGPPTRTEYRLIVENLSSRVSWQDLKDYMRHAGEVTYADAHKQRRNEGVVEFAT 232
Query: 160 SSDMKKALDKLDNAELNGRRIRLIEDK 186
SD+K A+DKLD+ ELNGRRIRLIEDK
Sbjct: 233 YSDLKNAIDKLDDTELNGRRIRLIEDK 259
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/189 (66%), Positives = 149/189 (78%), Gaps = 20/189 (10%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYG ERDLE+F +GYGR+RDV++KNG+GFVEF+D+RDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGTTERDLERFFRGYGRMRDVLIKNGYGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG----HDRDDRYGPPTRSDHRL 116
LLGERVTVE A+G P R W H +RYGPPTR+++RL
Sbjct: 61 KLLGERVTVERARG----------------TPRGRDQWSSRSDHRSHERYGPPTRTNYRL 104
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
IVENLSSR+SWQDLKD+MRQ GEV YADAHK+HRNEGVVEF S SD+K A++KLD+ ELN
Sbjct: 105 IVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFASYSDLKNAIEKLDDTELN 164
Query: 177 GRRIRLIED 185
GRRIRLIED
Sbjct: 165 GRRIRLIED 173
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 151/185 (81%), Gaps = 12/185 (6%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYG ERDLE+F +GYGR+RDV++KNG+GFVEF+D+RDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGTTERDLERFFRGYGRMRDVLIKNGYGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
LLGERVTVE A+G RGR + S H +RYGPPTR+++RLIVEN
Sbjct: 61 KLLGERVTVERARGT----PRGRDQWSSRS--------DHRSHERYGPPTRTNYRLIVEN 108
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSR+SWQDLKD+MRQ GEV YADAHK+HRNEGVVEF S SD+K A++KLD+ ELNGRRI
Sbjct: 109 LSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFASYSDLKNAIEKLDDTELNGRRI 168
Query: 181 RLIED 185
RLIED
Sbjct: 169 RLIED 173
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/185 (67%), Positives = 145/185 (78%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
LLGERV VE A+G R R R + RYGPP R+++RLIVEN
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYEDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ ELNGRR+
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRV 180
Query: 181 RLIED 185
L+ED
Sbjct: 181 HLVED 185
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/185 (67%), Positives = 145/185 (78%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
LLGERV VE A+G R R R + RYGPP R+++RLIVEN
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ ELNGRR+
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRV 180
Query: 181 RLIED 185
L+ED
Sbjct: 181 HLVED 185
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/185 (68%), Positives = 145/185 (78%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
LLGERV VE A+G R R R + RYGPP R+++RLIVEN
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ ELNGRRI
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRI 180
Query: 181 RLIED 185
L+ED
Sbjct: 181 HLVED 185
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/185 (67%), Positives = 145/185 (78%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
LLGERV VE A+G R R R + RYGPP R+++RLIVEN
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ ELNGRR+
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRV 180
Query: 181 RLIED 185
L+ED
Sbjct: 181 HLVED 185
>gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans]
Length = 322
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 126/187 (67%), Positives = 146/187 (78%), Gaps = 2/187 (1%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYG RERDLEKF KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGTRERDLEKFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDR--SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
LLGERV VE A+G R S R R + RYGPP R+++RLIV
Sbjct: 61 ELLGERVVVEPARGTARGGSHRDRYDDRYGRRGRYDRYNNSSRSNSRYGPPLRTEYRLIV 120
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
ENLSSRVSWQDLKD+MRQ GEV YADAHK++RNEGVVEF + DMK A++KLD+ ELNGR
Sbjct: 121 ENLSSRVSWQDLKDYMRQAGEVTYADAHKQNRNEGVVEFATLKDMKTAIEKLDDTELNGR 180
Query: 179 RIRLIED 185
RIRL+ED
Sbjct: 181 RIRLVED 187
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/191 (68%), Positives = 152/191 (79%), Gaps = 6/191 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD------DRYGPPTRSDH 114
LLGERV VE A+G R R R G Y G +D++ RYGPP R+++
Sbjct: 61 ELLGERVVVEPARGTARGSHRDRYGDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 120
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
RLIVENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ +
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTD 180
Query: 175 LNGRRIRLIED 185
LNGRRIRL+ED
Sbjct: 181 LNGRRIRLVED 191
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/186 (68%), Positives = 148/186 (79%), Gaps = 1/186 (0%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD-RYGPPTRSDHRLIVE 119
LLGERV VE A+G R R R G +++ RYGPP R+++RLIVE
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLIVE 120
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
NLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ ELNGRR
Sbjct: 121 NLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRR 180
Query: 180 IRLIED 185
I L+ED
Sbjct: 181 IHLVED 186
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/191 (66%), Positives = 149/191 (78%), Gaps = 6/191 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD------DRYGPPTRSDH 114
LLGERV VE A+G R R R G ++++ RYGPP R+++
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
RLIVENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ E
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTE 180
Query: 175 LNGRRIRLIED 185
LNGRRI L+ED
Sbjct: 181 LNGRRIHLVED 191
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/191 (66%), Positives = 149/191 (78%), Gaps = 6/191 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD------DRYGPPTRSDH 114
LLGERV VE A+G R R R G ++++ RYGPP R+++
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
RLIVENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ E
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTE 180
Query: 175 LNGRRIRLIED 185
LNGRRI L+ED
Sbjct: 181 LNGRRIHLVED 191
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/189 (67%), Positives = 149/189 (78%), Gaps = 4/189 (2%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRS----QERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRL 116
LLGERV VE A+G R +E R G G RYGPP R+++RL
Sbjct: 61 ELLGERVVVEPARGTARGPGGRREYDRGGDRYGDRGRGGGGRYDKNSSRYGPPLRTEYRL 120
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
IVENLSSRVSWQDLKD+MRQ GEV YADAHK+ +NEGVVEF +SSDMK A++KLD+ ELN
Sbjct: 121 IVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRKNEGVVEFATSSDMKTAIEKLDDTELN 180
Query: 177 GRRIRLIED 185
GRRIRL+ED
Sbjct: 181 GRRIRLVED 189
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/186 (68%), Positives = 148/186 (79%), Gaps = 1/186 (0%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD-RYGPPTRSDHRLIVE 119
LLGERV VE A+G R R R G +++ RYGPP R+++RLIVE
Sbjct: 61 ELLGERVVVEPARGSARGSNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLIVE 120
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
NLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ ELNGRR
Sbjct: 121 NLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRR 180
Query: 180 IRLIED 185
I L+ED
Sbjct: 181 IHLVED 186
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/191 (66%), Positives = 149/191 (78%), Gaps = 6/191 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD------DRYGPPTRSDH 114
LLGERV VE A+G R R R G ++++ RYGPP R+++
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
RLIVENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ E
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTE 180
Query: 175 LNGRRIRLIED 185
LNGRRI L+ED
Sbjct: 181 LNGRRIHLVED 191
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/185 (67%), Positives = 145/185 (78%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
LLGERV VE A+G R R R + RYGPP R+++RLIVEN
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVEN 120
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ ELNGRR+
Sbjct: 121 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRV 180
Query: 181 RLIED 185
L+ED
Sbjct: 181 HLVED 185
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/184 (65%), Positives = 147/184 (79%), Gaps = 12/184 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T+VY+G L Y VRERDLE+F +G+G+IR+V+LKNGFGFVEF+DYRDADDAVYELNG+ L
Sbjct: 2 TRVYVGHLSYRVRERDLERFFRGFGKIREVLLKNGFGFVEFDDYRDADDAVYELNGRELD 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE+A G R R PPPR W +RYGPPTR+D+R+I+ENLSS
Sbjct: 62 GERVVVELAHGTAR------------RPPPPRSAWADSGTNRYGPPTRTDYRVIIENLSS 109
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R+SWQDLKD MRQVG+V YADAH+ RNEGVVEF S SDMK+A++KLDN E+NGRRIR++
Sbjct: 110 RISWQDLKDRMRQVGDVTYADAHRHRRNEGVVEFASYSDMKRAIEKLDNTEINGRRIRVV 169
Query: 184 EDKP 187
E+KP
Sbjct: 170 EEKP 173
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/191 (67%), Positives = 150/191 (78%), Gaps = 7/191 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD------DRYGPPTRSDH 114
LLGERV VE A+G R R R Y G +D++ RYGPP R+++
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYD-DRYGNRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 119
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
RLIVENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ E
Sbjct: 120 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTE 179
Query: 175 LNGRRIRLIED 185
LNGRRI L+ED
Sbjct: 180 LNGRRIHLVED 190
>gi|28571691|ref|NP_788668.1| B52, isoform B [Drosophila melanogaster]
gi|7299789|gb|AAF54968.1| B52, isoform B [Drosophila melanogaster]
Length = 329
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 127/191 (66%), Positives = 149/191 (78%), Gaps = 6/191 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD------DRYGPPTRSDH 114
LLGERV VE A+G R R R G ++++ RYGPP R+++
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
RLIVENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ E
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTE 180
Query: 175 LNGRRIRLIED 185
LNGRRI L+ED
Sbjct: 181 LNGRRIHLVED 191
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 179/264 (67%), Gaps = 30/264 (11%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+V++GGL Y VRERDLEKF + YGRI++V +KNGF FVEF+DYRDADDAVYELNGK
Sbjct: 1 MSTRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD----------------- 104
LLGER+TVE A+G R ++ R YG R G+G R
Sbjct: 61 LLGERITVERARGTPRGSDQWR--YGDSRG-----GYGDSRRSADSVNRNTRTASSYKQS 113
Query: 105 --RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSD 162
RYGPPTR+++RL VENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF + SD
Sbjct: 114 LPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSD 173
Query: 163 MKKALDKLDNAELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRS 222
+K A+DKLD+ ELNGRRIRLIEDK + + + + ++ RS + S +P R+
Sbjct: 174 LKNAIDKLDDTELNGRRIRLIEDKRQVAVVPVAAAVAVAVPNQEHIRS-PNPSLNPNLRN 232
Query: 223 KSG---SPRKSKSKAKSVSRSPSP 243
+ +P + ++++++S+SP+P
Sbjct: 233 AAAHVPNPNQETAQSRNLSQSPNP 256
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/187 (67%), Positives = 149/187 (79%), Gaps = 6/187 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD--RYGPPTRSDHRLIV 118
LLGERV VE A+G RG GY R G + RYGPP R+++RL+V
Sbjct: 61 ELLGERVVVEPARGT----ARGPSGYRERDRYDRDRRGGRYDKNSSRYGPPLRTEYRLVV 116
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
ENLS+RVSWQDLKD+MRQ GEV YADAHK+ +NEGVVEF + SDMK A++KLD+ ELNGR
Sbjct: 117 ENLSTRVSWQDLKDYMRQAGEVTYADAHKQRKNEGVVEFATLSDMKTAIEKLDDTELNGR 176
Query: 179 RIRLIED 185
RIRL+ED
Sbjct: 177 RIRLVED 183
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 146/190 (76%), Gaps = 5/190 (2%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD-----RYGPPTRSDHR 115
LLGERV VE A+G R R R + + RYGPP R+++R
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEYR 120
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
LIVENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ EL
Sbjct: 121 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL 180
Query: 176 NGRRIRLIED 185
NGRR+ L+ED
Sbjct: 181 NGRRVHLVED 190
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 148/189 (78%), Gaps = 4/189 (2%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDR----YGPPTRSDHRL 116
LLGERV VE A+G R R R R + + R YGPP R+++RL
Sbjct: 61 ELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYRL 120
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
+VENLS+RVSWQDLKD+MRQ GEV YADAHK+ +NEGVVEF + SDMK A++KLD+ ELN
Sbjct: 121 VVENLSTRVSWQDLKDYMRQAGEVTYADAHKQRKNEGVVEFATLSDMKTAIEKLDDTELN 180
Query: 177 GRRIRLIED 185
GRRIRL+ED
Sbjct: 181 GRRIRLVED 189
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 146/190 (76%), Gaps = 5/190 (2%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD-----RYGPPTRSDHR 115
LLGERV VE A+G R R R + + RYGPP R+++R
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEYR 120
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
LIVENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ +L
Sbjct: 121 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTDL 180
Query: 176 NGRRIRLIED 185
NGRRIRL+ D
Sbjct: 181 NGRRIRLVGD 190
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 147/186 (79%), Gaps = 9/186 (4%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+GT+V++GGL Y VRERD+EKF + YGRI++V +KNGF FVEF+DYRDADDAVYELNGK
Sbjct: 1 MGTRVFVGGLTYRVRERDIEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKE 60
Query: 62 LLGERVTVEIAKGIDR--SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
LLGERV+VE A+G R Q RG G G R D+YGPPTR+++RLIVE
Sbjct: 61 LLGERVSVERARGTPRGCDQWRGSGGRGYGPPRGRSR-------DKYGPPTRTEYRLIVE 113
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
NLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A+DKLD+ ELNGRR
Sbjct: 114 NLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASYSDMKNAIDKLDDTELNGRR 173
Query: 180 IRLIED 185
IRL+ED
Sbjct: 174 IRLVED 179
>gi|322792693|gb|EFZ16561.1| hypothetical protein SINV_05882 [Solenopsis invicta]
Length = 386
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/186 (66%), Positives = 145/186 (77%), Gaps = 12/186 (6%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVGT+VY+GGLPYG RERDLE+F +GYGR RDV++KNG+GFVEF+DYRDADDAVYELNGK
Sbjct: 54 MVGTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGK 113
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
LLGE + + + S R R SY+ PR YGPPTR+++RL VEN
Sbjct: 114 ELLGE--SRDDMRHDRDSVNRNTRTASSYKQSLPR----------YGPPTRTEYRLTVEN 161
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF + SD+K A+DKLD+ ELNGRRI
Sbjct: 162 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTELNGRRI 221
Query: 181 RLIEDK 186
RLIEDK
Sbjct: 222 RLIEDK 227
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 150/190 (78%), Gaps = 20/190 (10%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++VY+G L Y VRERDLE+F KG+GRIR++ +KNGFGFVEF+D RDADDAVYELNGK
Sbjct: 1 MTSRVYVGRLNYDVRERDLERFFKGFGRIREISIKNGFGFVEFDDPRDADDAVYELNGKD 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYR----AP-PPRRGWGHDRDDRYGPPTRSDHRL 116
L+G+RV+VE+A+GI RRG YR AP PPRR RYGPPTR++++L
Sbjct: 61 LMGDRVSVELARGI-------RRGADYYRSRSTAPSPPRR--------RYGPPTRTEYQL 105
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
VENLSSRVSWQDLKD+MRQ GEV YADAHK RNEGVVEF + SDMK ALDKLDN +L+
Sbjct: 106 TVENLSSRVSWQDLKDYMRQAGEVTYADAHKLRRNEGVVEFATYSDMKNALDKLDNTDLS 165
Query: 177 GRRIRLIEDK 186
GRRIRL+E+K
Sbjct: 166 GRRIRLVEEK 175
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 150/190 (78%), Gaps = 20/190 (10%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++VY+G L Y VRERDLE+F KG+GRIR++ +KNGFGFVEF+D RDADDAVYELNGK
Sbjct: 1 MTSRVYVGRLNYDVRERDLERFFKGFGRIREISIKNGFGFVEFDDPRDADDAVYELNGKD 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYR----AP-PPRRGWGHDRDDRYGPPTRSDHRL 116
L+G+RV+VE+A+GI RRG YR AP PPRR RYGPPTR++++L
Sbjct: 61 LMGDRVSVELARGI-------RRGADYYRSRSTAPSPPRR--------RYGPPTRTEYQL 105
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
VENLSSRVSWQDLKD+MRQ GEV YADAHK RNEGVVEF + SDMK ALDKLDN +L+
Sbjct: 106 TVENLSSRVSWQDLKDYMRQAGEVTYADAHKLRRNEGVVEFATYSDMKNALDKLDNTDLS 165
Query: 177 GRRIRLIEDK 186
GRRIRL+E+K
Sbjct: 166 GRRIRLVEEK 175
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 150/198 (75%), Gaps = 23/198 (11%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+GT+V++GGL Y VRERD+EKF + YGRI++V +KNGF FVEF+DYRDADDAVYELNGK
Sbjct: 1 MGTRVFVGGLTYRVRERDIEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSY--------------RAPPPRRGWGHDRDDRYG 107
LLGERV+VE A+G R ++ R GS R P R HDR YG
Sbjct: 61 LLGERVSVERARGTPRGCDQWR---GSGGRGYGPPRGRSRDNREPDMR---SHDR---YG 111
Query: 108 PPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKAL 167
PPTR+++RLIVENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF S SDMK A+
Sbjct: 112 PPTRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASYSDMKNAI 171
Query: 168 DKLDNAELNGRRIRLIED 185
DKLD+ ELNGRRIRL+ED
Sbjct: 172 DKLDDTELNGRRIRLVED 189
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/206 (62%), Positives = 151/206 (73%), Gaps = 22/206 (10%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+V++GGL Y VRERDLEKF + YGRI++V +KNGF FVEF+DYRDADDAVYELNGK
Sbjct: 1 MSTRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRG-----YGSYRAPPPRRGWGHDRDD------------ 104
LLGER+TVE A+G R ++ R G YG R R HDRD
Sbjct: 61 LLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSA-RDDMRHDRDSVNRNTRTTSSYK 119
Query: 105 ----RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESS 160
RYGPPTR+++RL VENLSSRVSWQDLKD+MRQ GEV YADAHK+ RNEGVVEF +
Sbjct: 120 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATY 179
Query: 161 SDMKKALDKLDNAELNGRRIRLIEDK 186
SD+K A++KLD+ ELNGRRIRLIEDK
Sbjct: 180 SDLKNAIEKLDDTELNGRRIRLIEDK 205
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/187 (66%), Positives = 152/187 (81%), Gaps = 2/187 (1%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+GT+VYIGGLPY V+ERD+E+F +GYG++R+V++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MGTRVYIGGLPYRVKERDIERFFRGYGKLREVLIKNGYGFVEFEDYRDADDAVYELNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD--RYGPPTRSDHRLIVE 119
L GERV+VE A+G R R R +R RR D + RYGPPTR+D+RL+VE
Sbjct: 61 LCGERVSVEHARGSGRRGGRDDRNDRDHRDRGSRRSNWMDNNAPPRYGPPTRTDYRLVVE 120
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
NLSSRVSWQDLKD+MRQ GEV YADAHK+HRNEGVVEF S SD+K A++KLD +LNGRR
Sbjct: 121 NLSSRVSWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFASYSDLKTAIEKLDGTDLNGRR 180
Query: 180 IRLIEDK 186
I+L+EDK
Sbjct: 181 IKLVEDK 187
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/190 (64%), Positives = 150/190 (78%), Gaps = 20/190 (10%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++VY+G L Y VRERDLE+F KG+GRIR++ +KNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MTSRVYVGRLNYEVRERDLERFFKGFGRIREISIKNGFGFVEFDDHRDADDAVYELNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRA-----PPPRRGWGHDRDDRYGPPTRSDHRL 116
LLG+RV+VE+A+GI RRG YR+ PPRR RYGPPTR++++L
Sbjct: 61 LLGDRVSVELARGI-------RRGADYYRSRAASRSPPRR--------RYGPPTRTEYQL 105
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
VENLSSRVSWQDLKD+MRQ GEV YADAH+ RNEGVVEF + SDMK AL+KLDN +L+
Sbjct: 106 TVENLSSRVSWQDLKDYMRQAGEVTYADAHRLRRNEGVVEFATYSDMKNALEKLDNTDLS 165
Query: 177 GRRIRLIEDK 186
GRRIRLIE+K
Sbjct: 166 GRRIRLIEEK 175
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 145/185 (78%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDS-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF+S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+ED+P
Sbjct: 173 VEDRP 177
>gi|427777527|gb|JAA54215.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Rhipicephalus pulchellus]
Length = 363
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/189 (65%), Positives = 149/189 (78%), Gaps = 20/189 (10%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++VY+G L Y VRERDLE+F KG+GRIR++ +KNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MTSRVYVGRLNYEVRERDLERFFKGFGRIREISIKNGFGFVEFDDHRDADDAVYELNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRA-----PPPRRGWGHDRDDRYGPPTRSDHRL 116
LLG+RV+VE+A+GI RRG YR+ PPRR RYGPPTR++++L
Sbjct: 61 LLGDRVSVELARGI-------RRGADYYRSRAASRSPPRR--------RYGPPTRTEYQL 105
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
VENLSSRVSWQDLKD+MRQ GEV YADAH+ RNEGVVEF + SDMK ALDKLDN +L+
Sbjct: 106 TVENLSSRVSWQDLKDYMRQAGEVTYADAHRLRRNEGVVEFATYSDMKNALDKLDNTDLS 165
Query: 177 GRRIRLIED 185
GRRIRLIE+
Sbjct: 166 GRRIRLIEE 174
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 150/279 (53%), Positives = 182/279 (65%), Gaps = 23/279 (8%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G L Y VRERD+E+F + YGRI DV+LKNG+GFVEF+DYRDADDAVYELNGK L G
Sbjct: 4 RIYVGRLSYSVRERDIERFFRNYGRIVDVLLKNGYGFVEFDDYRDADDAVYELNGKELCG 63
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRR-----GWGHDRDDRYGPPTRSDHRLIVE 119
ERV +E A+G +R +R R GW RYGPP R+++RL+VE
Sbjct: 64 ERVVIEHARGPNRKDDRDGGYRDRGDRGGGRGGGRQPGWMDKSGSRYGPPARTEYRLVVE 123
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
NLSSRVSWQDLKD+MRQ GEV YADAHK+H+NEG+VEF S +DMK AL+KLD+ E+NGRR
Sbjct: 124 NLSSRVSWQDLKDYMRQAGEVTYADAHKQHKNEGIVEFSSRADMKTALEKLDDTEINGRR 183
Query: 180 IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRS-----------------RSSKSRSPRSRS 222
IRL+ED+ R R SRS S RS R+ KSRS SR
Sbjct: 184 IRLVEDRSRSRRRSHSRSHSRGRYRSRSPRSRSRSRRRSVSRSRSPVHRNGKSRSL-SRD 242
Query: 223 KSGSPRKSKSKAKSVSRSPSPSKTRKRSRSRSDSRARKV 261
+S S +SKS +SVSR S S+ R SR RS SR R V
Sbjct: 243 RSVSRGRSKSMDRSVSRDRSKSRDRSVSRDRSKSRDRSV 281
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG YR R G D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYG-YR----RSGR-----DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG YR R G D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYG-YR----RSGR-----DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|301788378|ref|XP_002929604.1| PREDICTED: hypothetical protein LOC100475275 [Ailuropoda
melanoleuca]
Length = 498
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|332024474|gb|EGI64672.1| Serine-arginine protein 55 [Acromyrmex echinatior]
Length = 367
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 183/311 (58%), Gaps = 70/311 (22%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVK----------------------------------GY 27
+ T+V++GGL Y VRERDLEKF + GY
Sbjct: 1 MSTRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFVYGRDKSLCQRDLERFFRGY 60
Query: 28 GRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRG-- 85
GR RDV++KNG+GFVEF+DYRDADDAVYELNGK LLGER+TVE A+G R ++ R G
Sbjct: 61 GRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRGSDQWRYGDS 120
Query: 86 ---YGSYRAPPPRRGWGHDRDD----------------RYGPPTRSDHRLIVENLSSRVS 126
YG R R HDRD RYGPPTR+++RL VENLSSRVS
Sbjct: 121 RGGYGDSRRSA-RDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENLSSRVS 179
Query: 127 WQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
WQDLKD+MRQ GEV YADAHK+ RNEGVVEF + SD+K A+DKLD+ ELNGRRIRLIEDK
Sbjct: 180 WQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTELNGRRIRLIEDK 239
Query: 187 PRGGGRGRSRSSSSR--------------SRSKSRSRSRSSKSRSPRSRSKSGSPRKSKS 232
RG S S S S+ ++RS S S P + +P + +
Sbjct: 240 RRGRRSRSSSSRSQAVAVLVATAVVVPVLSQERTRSPSPSLNPNLPSVVVHAQNPNQETA 299
Query: 233 KAKSVSRSPSP 243
+++++S+SP+P
Sbjct: 300 QSRNLSQSPNP 310
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Monodelphis
domestica]
Length = 491
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+ED+P
Sbjct: 173 VEDRP 177
>gi|281340422|gb|EFB16006.1| hypothetical protein PANDA_019831 [Ailuropoda melanoleuca]
Length = 488
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG R+ D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1 [Nomascus
leucogenys]
Length = 494
Score = 239 bits (611), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 239 bits (611), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|328714675|ref|XP_003245425.1| PREDICTED: serine-arginine protein 55-like isoform 2 [Acyrthosiphon
pisum]
Length = 309
Score = 239 bits (610), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 125/188 (66%), Positives = 151/188 (80%), Gaps = 5/188 (2%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G+++YIG LPYGVRERD++KF KG+GRI++++LKNG+GF+EF+DYRDADDAVYELNG+ L
Sbjct: 4 GSRIYIGHLPYGVRERDVKKFFKGFGRIKEILLKNGYGFIEFDDYRDADDAVYELNGREL 63
Query: 63 LGERVTVEIAKGIDRSQERGR-----RGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
GERV+VE A+G R + R PRR DR+DRYGPPTR+++RLI
Sbjct: 64 NGERVSVERARGTPRGSDVWRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNYRLI 123
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
VENLSSRVSWQDLKDFMRQ GEV YADAHK+ +NEGVVEF S SD+K ALDKLD+ ELNG
Sbjct: 124 VENLSSRVSWQDLKDFMRQAGEVTYADAHKQRKNEGVVEFASYSDLKTALDKLDDTELNG 183
Query: 178 RRIRLIED 185
RRIRL+ED
Sbjct: 184 RRIRLLED 191
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 239 bits (610), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG R+ D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 239 bits (610), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG R+ D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG R+ D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG YR R G D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYG-YR----RSGR-----DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG R+ D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 157/214 (73%), Gaps = 21/214 (9%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+GT+VYIG L Y RERD+E+F +GYGR+R++ LKNGFGFVEFED RD+DDAVYELNGK
Sbjct: 26 MGTRVYIGRLSYQTRERDVERFFRGYGRLREINLKNGFGFVEFEDPRDSDDAVYELNGKE 85
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYG-------SYRA------PPPRRGWGHDRDDRYGP 108
L GERVT+E A+G R R GY SYR+ PP RRG D+YGP
Sbjct: 86 LCGERVTIEHARGPVRRDYRDS-GYSNRGGDRDSYRSDRGGFGPPRRRGGV----DKYGP 140
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALD 168
PTR++HRLIVENLSSR SWQDLKD+MRQ GEV +ADAHK+H+NEGVVE S SD+K +
Sbjct: 141 PTRTEHRLIVENLSSRCSWQDLKDYMRQAGEVTFADAHKQHKNEGVVELASHSDLKNVIA 200
Query: 169 KLDNAELNGRRIRLIEDKPRGGGRGRSRSSSSRS 202
KLD E++GR+I+LIED+P+ R RSRS R+
Sbjct: 201 KLDGTEISGRKIKLIEDRPK---RHRSRSPRDRT 231
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG R+ D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG R+ D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFLSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 144/185 (77%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG R+ D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG R+ D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|147904116|ref|NP_001079647.1| serine/arginine-rich splicing factor 6 [Xenopus laevis]
gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis]
Length = 667
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 141/186 (75%), Gaps = 10/186 (5%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+DL++F GYG++ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLGYHVREKDLQRFFGGYGKLLEIDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV +E A+G R +R GYGS R G+ + R D+YGPP R++ RL+VENLS
Sbjct: 63 ERVIIEHARGPRR--DRDGYGYGS------RSGYRNQRTGRDKYGPPVRTEFRLVVENLS 114
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+A++KLD E+NGRRIRL
Sbjct: 115 SRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMKRAVEKLDGTEINGRRIRL 174
Query: 183 IEDKPR 188
+E K R
Sbjct: 175 VEGKTR 180
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 140/184 (76%), Gaps = 10/184 (5%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYG++ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLGYHVREKDIQRFFGGYGKLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R +R GYGS R G+ + R D+YGPP R++ RLIVENLS
Sbjct: 63 ERVIVEHARGPRR--DRDGYGYGS------RSGYRNQRSGRDKYGPPVRTEFRLIVENLS 114
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+A++KLD E+NGRRIRL
Sbjct: 115 SRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMKRAMEKLDGTEINGRRIRL 174
Query: 183 IEDK 186
+E K
Sbjct: 175 VEGK 178
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 142/195 (72%), Gaps = 17/195 (8%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRERD+E+F KGYGR+ D++LKNG+GFVEFEDYRDADDAVYELNGK L+G
Sbjct: 4 RVYIGRLSYQVRERDVERFFKGYGRVTDILLKNGYGFVEFEDYRDADDAVYELNGKDLMG 63
Query: 65 ERVTVEIAKGI------------DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS 112
+RV VE AKG + G Y SY PPRR RD RYGPP R+
Sbjct: 64 DRVLVEHAKGTPRGEGRSSSGGRGSDRGGGGDRYNSY--APPRRS---ARDSRYGPPVRT 118
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDN 172
+RL+VENLSSRVSWQDLKD+MRQ GEV YADAHK RNEG+VEF + SDM A+ KL+
Sbjct: 119 QYRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKSKRNEGIVEFATRSDMDNAIRKLNK 178
Query: 173 AELNGRRIRLIEDKP 187
E+NG+RI L+ED+P
Sbjct: 179 TEINGKRITLVEDRP 193
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 148/215 (68%), Gaps = 34/215 (15%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+GT+VYIG L + RERD+E+F KGYGR+RDV+LKNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 240 MGTRVYIGRLSHHARERDVERFFKGYGRLRDVMLKNGYGFVEFEDYRDADDAVYELNGKD 299
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
L GERV VE A+G R +R R Y Y PP RR G D+YGPPTR+++RLIVENL
Sbjct: 300 LAGERVIVEHARGGPRGDDR-RNSYRDY--PPARRSRGGGGRDKYGPPTRTEYRLIVENL 356
Query: 122 SSRVSWQ-------------------------------DLKDFMRQVGEVCYADAHKRHR 150
SSRVSWQ DLKD+MRQ GEV YADAHK H+
Sbjct: 357 SSRVSWQVSWFHCEDELGNHATTLTVGGAFRVQSTAVEDLKDYMRQAGEVTYADAHKEHK 416
Query: 151 NEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
NEG+VEF S SDMK A+ KLD E+NGR+I+L+ED
Sbjct: 417 NEGIVEFASYSDMKNAVSKLDGTEINGRKIKLVED 451
>gi|440907568|gb|ELR57702.1| Serine/arginine-rich splicing factor 4, partial [Bos grunniens
mutus]
Length = 488
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/181 (65%), Positives = 140/181 (77%), Gaps = 12/181 (6%)
Query: 9 GGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVT 68
G L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L GERV
Sbjct: 1 GRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVI 60
Query: 69 VEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLSSRVS 126
VE A+G R YGS R+ G+G+ R D+YGPPTR+++RLIVENLSSR S
Sbjct: 61 VEHARGPRRDG-----SYGSGRS-----GYGYRRSGRDKYGPPTRTEYRLIVENLSSRCS 110
Query: 127 WQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
WQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL+EDK
Sbjct: 111 WQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDK 170
Query: 187 P 187
P
Sbjct: 171 P 171
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 12/185 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G D S GR GYG R+ D+YGPPTR+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDGSYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENLS 112
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
Query: 183 IEDKP 187
+EDKP
Sbjct: 173 VEDKP 177
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 141/183 (77%), Gaps = 14/183 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T+V++G L Y VRERDLEKF KGYGRI +V+LKNG+GFVEF+DYRDA+DAV++LNGK L+
Sbjct: 3 TRVFVGRLNYDVRERDLEKFFKGYGRIGEVLLKNGYGFVEFDDYRDAEDAVHDLNGKKLM 62
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GER++VE+A+GI R G G S R RYGPP+R++++L+VENLSS
Sbjct: 63 GERISVELARGIRRGPGTGYGGASSSR--------------RYGPPSRTEYQLLVENLSS 108
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
VSWQDLKDFMRQ GEV Y DAHK RNEGVVEF + SDMK AL KL++ +L+GRRIRLI
Sbjct: 109 SVSWQDLKDFMRQAGEVTYTDAHKLRRNEGVVEFATYSDMKNALIKLNHMDLDGRRIRLI 168
Query: 184 EDK 186
E K
Sbjct: 169 EAK 171
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 138/184 (75%), Gaps = 4/184 (2%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VY+G L Y VRE+D+++F YG++ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYVGRLGYHVREKDIQRFFGSYGKLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R +R GYGS G+ + R D+YGPP R++ RL+VENLS
Sbjct: 63 ERVIVEHARGPRR--DRDGYGYGSRSKHGSPGGYRNQRSGRDKYGPPVRTEFRLVVENLS 120
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SD+K+A++KLD E+NGRRIRL
Sbjct: 121 SRCSWQDLKDFMRQAGEVTYADAHKERPNEGVIEFRSYSDLKRAVEKLDGTEINGRRIRL 180
Query: 183 IEDK 186
+E K
Sbjct: 181 LEGK 184
>gi|348510431|ref|XP_003442749.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Oreochromis
niloticus]
Length = 342
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 134/183 (73%), Gaps = 3/183 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VY+G L Y VRE+D+++F GYG++ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYVGKLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV +E A+G R G W D+YGPP R++HRLIVENLSSR
Sbjct: 63 ERVVIEHARGPRRDGYGYGGHQGDGGG---YSSWNRTGRDKYGPPVRTEHRLIVENLSSR 119
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+AL+KLD ++NGR+IRL+E
Sbjct: 120 CSWQDLKDFMRQAGEVTYADAHKGRANEGVIEFRSRSDMKRALEKLDGTDINGRKIRLVE 179
Query: 185 DKP 187
DKP
Sbjct: 180 DKP 182
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 229 bits (584), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 121/181 (66%), Positives = 138/181 (76%), Gaps = 6/181 (3%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS R RR G D+ YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGS-RRYSSRRATGRDK---YGPPVRTEYRLIVENLSSR 116
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 117 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 176
Query: 185 D 185
D
Sbjct: 177 D 177
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 229 bits (584), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 139/184 (75%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYG++ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R ++ GYG D+YGPP R+++RL+VENLSSR
Sbjct: 63 ERVIVEHARGPRRDRDFYGGGYGGGGRSSSYNSRSRTGRDKYGPPVRTEYRLVVENLSSR 122
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK H NEGV+EF S SDMK+ALDKLD ++NGR+IRL+E
Sbjct: 123 CSWQDLKDFMRQAGEVTYADAHKEHTNEGVIEFRSYSDMKRALDKLDGTDINGRKIRLVE 182
Query: 185 DKPR 188
D+PR
Sbjct: 183 DRPR 186
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1 [Acyrthosiphon
pisum]
Length = 309
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/188 (64%), Positives = 146/188 (77%), Gaps = 5/188 (2%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
GT+V++GGL + VRERDLE+F + GR++D+ +KNG+ FVEF+DYRDADDAVYELNG+ L
Sbjct: 4 GTRVFVGGLSHRVRERDLERFFQKIGRVKDIAMKNGYAFVEFDDYRDADDAVYELNGREL 63
Query: 63 LGERVTVEIAKGIDRSQERGR-----RGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
GERV+VE A+G R + R PRR DR+DRYGPPTR+++RLI
Sbjct: 64 NGERVSVERARGTPRGSDVWRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNYRLI 123
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
VENLSSRVSWQDLKDFMRQ GEV YADAHK+ +NEGVVEF S SD+K ALDKLD+ ELNG
Sbjct: 124 VENLSSRVSWQDLKDFMRQAGEVTYADAHKQRKNEGVVEFASYSDLKTALDKLDDTELNG 183
Query: 178 RRIRLIED 185
RRIRL+ED
Sbjct: 184 RRIRLLED 191
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2 [Takifugu
rubripes]
Length = 374
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 139/184 (75%), Gaps = 6/184 (3%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L Y RE D+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYIGRLSYRARENDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE KG R GY S R+ P G+G DRYGPP R+D+RLIVENLSS
Sbjct: 62 GERVIVEHTKGPRRDG-----GY-SGRSKPRPGGYGRWGRDRYGPPIRTDYRLIVENLSS 115
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+MRQ GEV YAD HK +NEGV+EF SDMK+AL+KLD E+NGR+IRLI
Sbjct: 116 RCSWQDLKDYMRQAGEVTYADTHKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLI 175
Query: 184 EDKP 187
ED+P
Sbjct: 176 EDRP 179
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 143/200 (71%), Gaps = 15/200 (7%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M +VY+G L Y RERD+E+F +G+GRIR++ LKNGFGFVEFEDYRDADDAVYELNGK
Sbjct: 39 MSSGRVYVGRLSYQARERDVERFFRGFGRIREINLKNGFGFVEFEDYRDADDAVYELNGK 98
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGY---------------GSYRAPPPRRGWGHDRDDR 105
L+GERV +E A+G R ++ R GY G G G R
Sbjct: 99 ELVGERVIIEHARGPARGRDEYRYGYRRRGDKFGGEGGGGGGGRGRDGGGGGGGSRSSQR 158
Query: 106 YGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKK 165
YGPP R++ R++VENLSSRVSWQDLKD+MRQ GEV +ADAHK+H+NEG+VEF + SDMK
Sbjct: 159 YGPPVRTEFRIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHKNEGIVEFATYSDMKN 218
Query: 166 ALDKLDNAELNGRRIRLIED 185
A++KLD E+NGRRI+L+ED
Sbjct: 219 AVEKLDGTEINGRRIKLVED 238
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 141/185 (76%), Gaps = 7/185 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V++G L RERD+EKF KGYGRIR++ LKNGFGFVEFED+RDADDAVYELNGK
Sbjct: 1 MSGCRVFVGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFEDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ + R + + Y++ G G +YGPP R++HRLIVEN
Sbjct: 61 ELCNERVTIEHARARRGGRGRYSQRFSYYQS----YGGG---SSQYGPPLRTEHRLIVEN 113
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMR+ GEV + DAH+ + NEGVVEF SSSDMK A+DKLD +ELNGRRI
Sbjct: 114 LSSRVSWQDLKDFMRKAGEVTFVDAHRNNPNEGVVEFASSSDMKSAMDKLDGSELNGRRI 173
Query: 181 RLIED 185
+LIED
Sbjct: 174 KLIED 178
>gi|148238297|ref|NP_001085381.1| serine/arginine-rich splicing factor 4 [Xenopus laevis]
gi|49257226|gb|AAH71160.1| MGC83263 protein [Xenopus laevis]
Length = 259
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/188 (62%), Positives = 138/188 (73%), Gaps = 6/188 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G++V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MSGSRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD---DRYGPPTRSDHRLI 117
L ERVT+E+A+ G G Y P R + RYGPP R++HR+I
Sbjct: 61 VLCNERVTIELARNRRGRGGMMGGGGGRY---PNRFAYRQSNSGGPSRYGPPVRTEHRII 117
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
VENLSSRVSWQDLKDFMR+ GEV Y DAH+ +RNEGVVEF S SDMK ALDKLD EL+G
Sbjct: 118 VENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRNEGVVEFASYSDMKSALDKLDGVELSG 177
Query: 178 RRIRLIED 185
R+I+L ED
Sbjct: 178 RKIKLTED 185
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 37 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 96
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 97 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 154
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 155 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 214
Query: 185 DKPR 188
DKPR
Sbjct: 215 DKPR 218
>gi|54020785|ref|NP_001005638.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
gi|49250524|gb|AAH74634.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 135/188 (71%), Gaps = 3/188 (1%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD---DRYGPPTRSDHRLI 117
L ERVT+E A+ G G P R + RYGPP R++HR+I
Sbjct: 61 VLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRII 120
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
VENLSSRVSWQDLKDFMR+ GEV Y DAH+ +RNEGVVEF S +DMK ALDKLD EL+G
Sbjct: 121 VENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRNEGVVEFASYTDMKNALDKLDGVELSG 180
Query: 178 RRIRLIED 185
R+I+L ED
Sbjct: 181 RKIKLTED 188
>gi|89273959|emb|CAJ82241.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 261
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 135/187 (72%), Gaps = 2/187 (1%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIV 118
L ERVT+E A+ G G P R + RYGPP R++HR+IV
Sbjct: 61 VLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGPRYGPPVRTEHRIIV 120
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
ENLSSRVSWQDLKDFMR+ GEV Y DAH+ +RNEGVVEF S +DMK ALDKLD EL+GR
Sbjct: 121 ENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRNEGVVEFASYTDMKNALDKLDGVELSGR 180
Query: 179 RIRLIED 185
+I+L ED
Sbjct: 181 KIKLTED 187
>gi|71895047|ref|NP_001026014.1| splicing factor, arginine/serine-rich 6 [Gallus gallus]
gi|53133810|emb|CAG32234.1| hypothetical protein RCJMB04_20j14 [Gallus gallus]
Length = 348
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/183 (63%), Positives = 136/183 (74%), Gaps = 1/183 (0%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFV+FED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVKFEDSRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R ++ S RD +YGPP R++HRLIVENLSSR
Sbjct: 63 ERVIVEHARGPRRDRDGYSYSSRSGGGGGYSSRRQSGRD-KYGPPVRTEHRLIVENLSSR 121
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR+IRL+E
Sbjct: 122 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRKIRLVE 181
Query: 185 DKP 187
DKP
Sbjct: 182 DKP 184
>gi|449274709|gb|EMC83787.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 257
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 114/185 (61%), Positives = 135/185 (72%), Gaps = 10/185 (5%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V++G L RERD+EKF KGYGRIR++ LKNGFGFVEFED+RDADDA+YELNGK
Sbjct: 1 MSGCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ +R + P + G RYGPP R++HR+IVEN
Sbjct: 61 ELCDERVTIEHARARRGRGRFSQR----FSYYPSQSG------SRYGPPIRTEHRIIVEN 110
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSR+SWQDLKD MR+ GEV Y DAH+ +RNEGVVEF S SDMK AL+KLD ELNGRRI
Sbjct: 111 LSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTELNGRRI 170
Query: 181 RLIED 185
RL ED
Sbjct: 171 RLTED 175
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 142/191 (74%), Gaps = 6/191 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M +VY+G L Y RERD+E+F +G+GRIR++ LKNGFGFVEFEDYRDADDAVYELNGK
Sbjct: 1 MSSGRVYVGRLSYQARERDVERFFRGFGRIREINLKNGFGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGR------RGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
L+GERV +E A+G R ++ R G G G G RYGPP R++
Sbjct: 61 ELVGERVIIEHARGPARGRDEYRFGGEGGGGGGGRGRDGGGGGGGSRSSQRYGPPVRTEF 120
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++VENLSSRVSWQDLKD+MRQ GEV +ADAHK+H+NEG+VEF + SDMK A++KLD E
Sbjct: 121 RIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHKNEGIVEFATYSDMKNAVEKLDGTE 180
Query: 175 LNGRRIRLIED 185
+NGRRI+L+ED
Sbjct: 181 INGRRIKLVED 191
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 120/187 (64%), Positives = 138/187 (73%), Gaps = 5/187 (2%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD---DRYGPPTRSDHRLIVENL 121
ERV VE A+G R +RG S G+ R D+YGPP R++ RLIVENL
Sbjct: 63 ERVIVEHARGPRR--DRGDWVVVSSHDKGGGGGYSSRRTSGRDKYGPPVRTEFRLIVENL 120
Query: 122 SSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
SSR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IR
Sbjct: 121 SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR 180
Query: 182 LIEDKPR 188
LIEDKPR
Sbjct: 181 LIEDKPR 187
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 138/197 (70%), Gaps = 17/197 (8%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+GT+VYIG L Y RERD+E+F +G+G +R+V LKNGFGFVEF+D RDADDAVYELNGK
Sbjct: 1 MGTRVYIGRLSYQTRERDVERFFRGFGHLREVNLKNGFGFVEFDDPRDADDAVYELNGKD 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD-------------DRYGP 108
L GERV +E A+G R R G YR D+YGP
Sbjct: 61 LCGERVIIEHARGPVRRD----RDSGGYRGSERDYRGDRGGGYGPPRRRGGGGGIDKYGP 116
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALD 168
PTR+D+RLIVENLSSR SWQDLKD+MRQ GEV YADAHK H+NEGVVEF + SDMK A+
Sbjct: 117 PTRTDNRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKEHKNEGVVEFATYSDMKNAMS 176
Query: 169 KLDNAELNGRRIRLIED 185
KLD E+NGR++RL+ED
Sbjct: 177 KLDGTEINGRKVRLVED 193
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Monodelphis
domestica]
Length = 340
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/183 (63%), Positives = 135/183 (73%), Gaps = 1/183 (0%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R ++ S RD +YGPP R++ RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRRDRDGYSYSSRSGGGGGYSSRRQSGRD-KYGPPVRTEFRLIVENLSSR 121
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR+IRL+E
Sbjct: 122 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRKIRLVE 181
Query: 185 DKP 187
DKP
Sbjct: 182 DKP 184
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELN K L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALD+LD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDRLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/185 (61%), Positives = 135/185 (72%), Gaps = 10/185 (5%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V++G L RERD+EKF KGYGRIR++ LKNGFGFVEFED+RDADDA+YELNGK
Sbjct: 1 MSGCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ +R SY + RYGPP R++HR+IVEN
Sbjct: 61 ELCDERVTIEHARARRGRGRFAQR--FSY--------YSQSGSSRYGPPVRTEHRIIVEN 110
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSR+SWQDLKD MR+ GEV Y DAH+ +RNEGVVEF S SDMK AL+KLD ELNGRRI
Sbjct: 111 LSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTELNGRRI 170
Query: 181 RLIED 185
+LIED
Sbjct: 171 KLIED 175
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
E V VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 EHVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Canis
lupus familiaris]
Length = 344
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R++ RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R++ RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R++ RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
E V VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 EHVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Taeniopygia
guttata]
Length = 277
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 135/185 (72%), Gaps = 9/185 (4%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V++G L RERD+EKF KGYGRIR++ LKNGFGFVEFED+RDADDA+YELNGK
Sbjct: 1 MSGCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ +R + Y++ RYGPP R++HR+IVEN
Sbjct: 61 ELCDERVTIEHARARRGRGRFSQR-FSYYQSTSG--------SSRYGPPVRTEHRIIVEN 111
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSR+SWQDLKD MR+ GEV Y DAH+ +RNEGVVEF S SDMK AL+KLD ELNGRRI
Sbjct: 112 LSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTELNGRRI 171
Query: 181 RLIED 185
+L ED
Sbjct: 172 KLTED 176
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/202 (58%), Positives = 137/202 (67%), Gaps = 42/202 (20%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+DL++F GYGR+ +V LKNG+GFVEFED RDA+DAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDLQRFFSGYGRLLEVDLKNGYGFVEFEDSRDAEDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD-------------------DR 105
ERV VE A+G PRR DRD D+
Sbjct: 63 ERVIVEHARG-------------------PRR----DRDGYSYSSRSGGYSSRRTSGRDK 99
Query: 106 YGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKK 165
YGPP R+++RLIVENLSSR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+
Sbjct: 100 YGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKR 159
Query: 166 ALDKLDNAELNGRRIRLIEDKP 187
ALDKLD E+NGR+IRL+EDKP
Sbjct: 160 ALDKLDGTEINGRKIRLVEDKP 181
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELN K L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus norvegicus]
Length = 339
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELN K L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELN K L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/199 (60%), Positives = 141/199 (70%), Gaps = 12/199 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L Y RE D+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYIGRLSYRARENDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE KG R R WG DR YGPP R+D+RLIVENLSS
Sbjct: 62 GERVIVEHTKGPRRDGGYSGRSG--------YGRWGRDR---YGPPIRTDYRLIVENLSS 110
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+MRQ GEV YAD HK +NEGV+EF SDMK+AL+KLD E+NGR+IRLI
Sbjct: 111 RCSWQDLKDYMRQAGEVTYADTHKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLI 170
Query: 184 EDKPRGGGRGRSRSSSSRS 202
ED+P G R RS S S+ +
Sbjct: 171 EDRP-GAKRRRSYSRSAAA 188
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/149 (62%), Positives = 106/149 (71%), Gaps = 11/149 (7%)
Query: 39 FGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGW 98
+GFVEF+D RDADDAVY+LNGK L GERV VE KG R R W
Sbjct: 1209 YGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKGPRRDGGYSGRSG--------YGRW 1260
Query: 99 GHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFE 158
G DR YGPP R+D+RLIVENLSSR SWQDLKD+MRQ GEV YAD HK +NEGV+EF
Sbjct: 1261 GRDR---YGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKNEGVIEFR 1317
Query: 159 SSSDMKKALDKLDNAELNGRRIRLIEDKP 187
SDMK+AL+KLD E+NGR+IRLIED+P
Sbjct: 1318 QYSDMKRALEKLDGTEVNGRKIRLIEDRP 1346
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu rubripes]
Length = 379
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/182 (60%), Positives = 136/182 (74%), Gaps = 7/182 (3%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYG++ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R ++ G G R D+YGPP R+++RL+VENLSSR
Sbjct: 63 ERVIVEHARGPRRDRDFYGGGSGYSSRSRTGR-------DKYGPPVRTEYRLVVENLSSR 115
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD ++NGR+IRL+E
Sbjct: 116 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMKRALDKLDGTDINGRKIRLVE 175
Query: 185 DK 186
D+
Sbjct: 176 DR 177
>gi|147907282|ref|NP_001079543.1| keratin 5, gene 1 b [Xenopus laevis]
gi|28278124|gb|AAH44085.1| MGC52712 protein [Xenopus laevis]
Length = 261
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 138/188 (73%), Gaps = 5/188 (2%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDR---DDRYGPPTRSDHRLI 117
L ERVT+E A+ + G G G P R + + RYGPP R++HR+I
Sbjct: 61 VLCSERVTIEHAR--NHRGRGGMMGGGGGGRYPNRFAYRQSNSGGNSRYGPPVRTEHRII 118
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
VENLSSRVSWQDLK FMR+ GEV Y DAH+ +RNEGVVEF S +DMK ALDKLD EL+G
Sbjct: 119 VENLSSRVSWQDLKGFMRKAGEVTYVDAHRSNRNEGVVEFASYTDMKSALDKLDGVELSG 178
Query: 178 RRIRLIED 185
R+I+L+ED
Sbjct: 179 RKIKLVED 186
>gi|410911522|ref|XP_003969239.1| PREDICTED: uncharacterized protein LOC101080136 isoform 1 [Takifugu
rubripes]
Length = 374
Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 132/184 (71%), Gaps = 11/184 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L Y RE D+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYIGRLSYRARENDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE KG R WG DR YGPP R+D+RLIVENLSS
Sbjct: 62 GERVIVEHTKGPRRDGGY--------SGRSGYGRWGRDR---YGPPIRTDYRLIVENLSS 110
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+MRQ GEV YAD HK +NEGV+EF SDMK+AL+KLD E+NGR+IRLI
Sbjct: 111 RCSWQDLKDYMRQAGEVTYADTHKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLI 170
Query: 184 EDKP 187
ED+P
Sbjct: 171 EDRP 174
>gi|157133042|ref|XP_001662753.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108870967|gb|EAT35192.1| AAEL012621-PA [Aedes aegypti]
Length = 342
Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 139/193 (72%), Gaps = 8/193 (4%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLP+GVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDA + +
Sbjct: 1 MVGSRVYVGGLPHGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAPTQTHYI 60
Query: 61 SLLG-ERVTVEIAKGIDR-------SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS 112
LL RVTVE A+G R R + RYGPP R+
Sbjct: 61 FLLLIYRVTVEPARGTARGGGSRRDHDRYDRYDRRGGGGRYDKNRSNSRNSSRYGPPLRT 120
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDN 172
++RL VENLSSRVSWQDLKD+MRQ GEV YADAHK+ +NEGVVEF +SSDMK A+DKLD+
Sbjct: 121 EYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRKNEGVVEFATSSDMKTAIDKLDD 180
Query: 173 AELNGRRIRLIED 185
ELNGRRIRL+ED
Sbjct: 181 TELNGRRIRLVED 193
>gi|78369222|ref|NP_001030349.1| serine/arginine-rich splicing factor 6 [Bos taurus]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|77567850|gb|AAI07554.1| Splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 135/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ + LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLGIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R++ RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DKPR
Sbjct: 181 DKPR 184
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 143/194 (73%), Gaps = 18/194 (9%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+V+IG L Y VRERD+++F KGYGR+ D+ LKNGFGFVEFED+RDADDA+ +LNGK
Sbjct: 1 MTTRVFIGHLSYQVRERDVDRFFKGYGRVGDIHLKNGFGFVEFEDHRDADDAIKDLNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYG---------SYRAPPPRRGWGHDRDDRYGPPTRS 112
LLGERV+VE+A G RRG G +R+PP R + R+ R+GPP R+
Sbjct: 61 LLGERVSVELAHG-------SRRGPGGRIVAPGSRDWRSPPGR--FNAPRESRFGPPVRT 111
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDN 172
+++LIVENLSS VSWQDLKD+MRQ GEV + DAH N+G+VEF + +DM+ AL+KLDN
Sbjct: 112 NYQLIVENLSSHVSWQDLKDYMRQAGEVTFTDAHSNRPNQGIVEFSNYADMRNALNKLDN 171
Query: 173 AELNGRRIRLIEDK 186
+L+GRRI+L E K
Sbjct: 172 TDLSGRRIKLYEAK 185
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/252 (55%), Positives = 170/252 (67%), Gaps = 14/252 (5%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+DYRDADDAVYELNGK
Sbjct: 1 MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRG------YGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
L ERVT+E A+ G +G YR R G RYGPP R++H
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGRFSPRFGGYRQS---RSGG----SRYGPPVRTEH 113
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R+IVENLSSR+SWQDLKD MR+VGEV + DAH+ +NEGVVEF S SDMK A++KLD +
Sbjct: 114 RIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTKKNEGVVEFASHSDMKNAIEKLDGTD 173
Query: 175 LNGRRIRLIEDKPRG-GGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSK 233
LNGR+++L ED+ R SSSRSRS SRSRS S+ RSRS S +P K +
Sbjct: 174 LNGRKLKLYEDRKRNRSRSRSRSRSSSRSRSPSRSRSPERGSKRSRSRSLSRTPEKKSTS 233
Query: 234 AKSVSRSPSPSK 245
+S SRSP+P +
Sbjct: 234 NRSPSRSPTPQR 245
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 138/190 (72%), Gaps = 18/190 (9%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYG++ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGR---------RGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
ERV VE A+G R ++ GY S R+ R D+YGPP R+++R
Sbjct: 63 ERVIVEHARGPRRDRDGYGGGYWGGGRSNGYSS-RSRSGR--------DKYGPPVRTEYR 113
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
LIVENLSSR SWQDLKDFMRQ GEV YADAHK NEGV+EF + SDMK+ALDKLD ++
Sbjct: 114 LIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRTYSDMKRALDKLDGTDI 173
Query: 176 NGRRIRLIED 185
NGR+IRL+ED
Sbjct: 174 NGRKIRLVED 183
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 136/185 (73%), Gaps = 2/185 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+N + IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINXQDIRLIE 180
Query: 185 DKPRG 189
DKPR
Sbjct: 181 DKPRA 185
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2 [Oryzias
latipes]
Length = 384
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 139/199 (69%), Gaps = 26/199 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L Y RE+D+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 64 GERVTVEIAK-------------GIDRSQERGRR--GYGSYRAPPPRRGWGHDRDDRYGP 108
GERV VE K +D+ R + GYG WG DRYGP
Sbjct: 62 GERVIVEHTKGPRRDGGYGGGGRNLDQESSRSSKNGGYGR---------WGGR--DRYGP 110
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALD 168
P R+D+RLIVENLSSR SWQDLKD+MRQ GEV YAD HK RNEGV+EF SDMK+AL+
Sbjct: 111 PVRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRNEGVIEFRQYSDMKRALE 170
Query: 169 KLDNAELNGRRIRLIEDKP 187
KLD E+NGR+IRLIED+P
Sbjct: 171 KLDGTEVNGRKIRLIEDRP 189
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1 [Oryzias
latipes]
Length = 367
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 136/185 (73%), Gaps = 2/185 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYG++ +V +KNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLLEVDMKNGYGFVEFEDNRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
ERV VE A+G R ++ G R D+YGPP R+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDRDGYGGGSSWGGGRSNNSSSSRTRVGRDKYGPPVRTEYRLIVENLS 122
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKDFMRQ GEV YADAHK N+GV+EF S SDMK+ALDKLD ++NGR+IRL
Sbjct: 123 SRCSWQDLKDFMRQAGEVTYADAHKERTNQGVIEFRSYSDMKRALDKLDGTDINGRKIRL 182
Query: 183 IEDKP 187
+ED+P
Sbjct: 183 VEDRP 187
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 135/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R++ RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
DK R
Sbjct: 181 DKAR 184
>gi|355557751|gb|EHH14531.1| hypothetical protein EGK_00474, partial [Macaca mulatta]
Length = 477
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/170 (65%), Positives = 131/170 (77%), Gaps = 12/170 (7%)
Query: 20 LEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGI--DR 77
+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L GERV VE A+G D
Sbjct: 1 VERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDG 60
Query: 78 SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQV 137
S GR GYG R+ D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ
Sbjct: 61 SYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQA 110
Query: 138 GEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL+EDKP
Sbjct: 111 GEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKP 160
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 137/185 (74%), Gaps = 11/185 (5%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ +VY+G L Y ERD+E F +GYGRIRD++LKNGFGFVEF+D RDADDAVYELNGK
Sbjct: 4 MSARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKNGFGFVEFDDPRDADDAVYELNGKE 63
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSY-RAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L GERV +E + R R R G+G + R PPPRR + RYGPP ++ +RLIVEN
Sbjct: 64 LCGERVILEFS----RRGPRSRMGFGGFDRFPPPRR------ESRYGPPQQTRYRLIVEN 113
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSR SWQDLKD MR GEV +ADAHK+H NEG+V F + D+++ALDKL E+NGR++
Sbjct: 114 LSSRCSWQDLKDIMRTAGEVTFADAHKQHPNEGIVCFLTRDDLERALDKLQGKEVNGRKL 173
Query: 181 RLIED 185
+LI+D
Sbjct: 174 KLIDD 178
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 142/194 (73%), Gaps = 16/194 (8%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+V+IG L Y VRERD+++F KGYGR+ D+ LKNGFGFVEFED+RDADDA+ +LNGK
Sbjct: 1 MTTRVFIGHLSYQVRERDVDRFFKGYGRVGDIHLKNGFGFVEFEDHRDADDAIKDLNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYG---------SYRAPPPRRGWGHDRDDRYGPPTRS 112
LLGERV+VE+A G RRG G +R+PP + R+ R+GPP R+
Sbjct: 61 LLGERVSVELAHG-------SRRGPGGRIVAPGSRDWRSPPGGGRFNAPRESRFGPPVRT 113
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDN 172
+++L+VENLSS VSWQDLKD+MRQ GEV + DAH N+G+VEF + +DM+ AL+KLDN
Sbjct: 114 NYQLVVENLSSHVSWQDLKDYMRQAGEVTFTDAHSNRPNQGIVEFSNYADMRNALNKLDN 173
Query: 173 AELNGRRIRLIEDK 186
+L+GRRI+L E K
Sbjct: 174 TDLSGRRIKLYEAK 187
>gi|427777529|gb|JAA54216.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 308
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/185 (59%), Positives = 137/185 (74%), Gaps = 17/185 (9%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+V++G L Y VRERDLE+F +GYGRI D++LKNGFGFV+ DYRDA+DAV +LNGK
Sbjct: 1 MATRVFVGRLNYDVRERDLERFFRGYGRIEDIVLKNGFGFVDISDYRDAEDAVRDLNGKR 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
L+GERVTVE+A+G+ R RG PRR +GPPTR++++L+VENL
Sbjct: 61 LMGERVTVELARGMRRGPPDYDRG--------PRR---------FGPPTRTNYQLLVENL 103
Query: 122 SSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
S+ VSWQDLKDFMRQ G+V Y DAHK R++GVVEF S SDMK AL LDN L+GRRIR
Sbjct: 104 STSVSWQDLKDFMRQAGDVTYTDAHKLRRHQGVVEFASYSDMKNALRSLDNVSLDGRRIR 163
Query: 182 LIEDK 186
L+E K
Sbjct: 164 LVETK 168
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/184 (63%), Positives = 135/184 (73%), Gaps = 2/184 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELN K L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R+++RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DKPR 188
KPR
Sbjct: 181 YKPR 184
>gi|426241493|ref|XP_004014625.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2 [Ovis
aries]
Length = 339
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 134/184 (72%), Gaps = 8/184 (4%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYE N K L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYEPNAK-LCG 61
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R G G RR G D+ YGPP R++ RLIVENLSSR
Sbjct: 62 ERVIVEHARGPSREGSYSSGGGGYSS----RRTSGRDK---YGPPVRTEFRLIVENLSSR 114
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 115 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 174
Query: 185 DKPR 188
DKPR
Sbjct: 175 DKPR 178
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 135/188 (71%), Gaps = 10/188 (5%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G++V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 18 MSGSRVFIGRLSPQARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK 77
Query: 61 SLLGERVTVEIAKGIDRSQERGR---RGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
LL ERVT+E A+ R G YR R G RYGPP R++HRLI
Sbjct: 78 ELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQS---RNTG----SRYGPPVRTEHRLI 130
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
VENLSSR+SWQDLKD MR+ GEV + DAH+ +NEGVVEF S SD+K A+ KLD ELNG
Sbjct: 131 VENLSSRISWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRSDLKNAISKLDGTELNG 190
Query: 178 RRIRLIED 185
R++++ ED
Sbjct: 191 RKLKIFED 198
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus rotundus]
Length = 345
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 134/182 (73%), Gaps = 2/182 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G R +R YGS D+YGPP R++ RLIVENLSSR
Sbjct: 63 ERVIVEHARGPRR--DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSR 120
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 121 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 180
Query: 185 DK 186
DK
Sbjct: 181 DK 182
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 135/188 (71%), Gaps = 10/188 (5%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G++V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MSGSRVFIGRLSPQARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGR---RGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
LL ERVT+E A+ R G YR R G RYGPP R++HRLI
Sbjct: 61 ELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQS---RNTG----SRYGPPVRTEHRLI 113
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
VENLSSR+SWQDLKD MR+ GEV + DAH+ +NEGVVEF S SD+K A+ KLD ELNG
Sbjct: 114 VENLSSRISWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRSDLKNAISKLDGTELNG 173
Query: 178 RRIRLIED 185
R++++ ED
Sbjct: 174 RKLKIFED 181
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 136/199 (68%), Gaps = 14/199 (7%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RERD+EKF KGYGRIR+V LKNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MSGCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRG--------------YGSYRAPPPRRGWGHDRDDRY 106
L ERVT+E A+ G + SYR G G RY
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGGGGGGGGGRFSPRFSSYRQGSGGHGGGGGGSSRY 120
Query: 107 GPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKA 166
GPP R++HR+IVENLSSR+SWQDLKD MR+ GEV + DAH+ ++NEGVVEF S SDMK A
Sbjct: 121 GPPVRTEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNKNEGVVEFASHSDMKNA 180
Query: 167 LDKLDNAELNGRRIRLIED 185
+DKLD +LNGR+++L ED
Sbjct: 181 IDKLDGTDLNGRKLKLSED 199
>gi|426241491|ref|XP_004014624.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Ovis
aries]
Length = 344
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/191 (62%), Positives = 136/191 (71%), Gaps = 17/191 (8%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYE N K L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYEPNAK-LCG 61
Query: 65 ERVTVEIAKG-------IDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
ERV VE A+G + G GY S RR G D+ YGPP R++ RLI
Sbjct: 62 ERVIVEHARGPXXXXXXFSSHDKGGGGGYSS------RRTSGRDK---YGPPVRTEFRLI 112
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
VENLSSR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NG
Sbjct: 113 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEING 172
Query: 178 RRIRLIEDKPR 188
R IRLIEDKPR
Sbjct: 173 RNIRLIEDKPR 183
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2 [Oryzias
latipes]
Length = 373
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 136/191 (71%), Gaps = 8/191 (4%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYG++ +V +KNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLLEVDMKNGYGFVEFEDNRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--------DRYGPPTRSDHRL 116
ERV VE A+G R ++ G + D+YGPP R+++RL
Sbjct: 63 ERVIVEHARGPRRDRDGYGGGSSWGGGRSSGYSSSSNSSSSRTRVGRDKYGPPVRTEYRL 122
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
IVENLSSR SWQDLKDFMRQ GEV YADAHK N+GV+EF S SDMK+ALDKLD ++N
Sbjct: 123 IVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNQGVIEFRSYSDMKRALDKLDGTDIN 182
Query: 177 GRRIRLIEDKP 187
GR+IRL+ED+P
Sbjct: 183 GRKIRLVEDRP 193
>gi|241574285|ref|XP_002403076.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502149|gb|EEC11643.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 268
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/198 (58%), Positives = 139/198 (70%), Gaps = 26/198 (13%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+V+IG L VRE+DL+KF KGYGR+ D+ LKNGFGFVEF+D+RDADDA+ +LNGK
Sbjct: 1 MTTRVFIGHLSCQVREKDLDKFFKGYGRVGDIHLKNGFGFVEFDDHRDADDAISDLNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPR-------------RGWGHDRDDRYGP 108
LLGERV+VE+A YGS R P R R RD R+GP
Sbjct: 61 LLGERVSVELA-------------YGSRRGPGGRIVPPRPDWRSPPPRRPFAPRDTRFGP 107
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALD 168
P R++++LIVENLSS VSWQDLKD+MRQ GEV YADAHK NEGVVEF + SDMK A+
Sbjct: 108 PQRTEYQLIVENLSSHVSWQDLKDYMRQAGEVTYADAHKIRPNEGVVEFANYSDMKNAIS 167
Query: 169 KLDNAELNGRRIRLIEDK 186
KLDN +L+GRRIRL E+K
Sbjct: 168 KLDNTDLSGRRIRLYEEK 185
>gi|56797744|ref|NP_001008732.1| serine/arginine-rich splicing factor 6b [Danio rerio]
gi|56541079|gb|AAH86820.1| Splicing factor, arginine/serine-rich 6b [Danio rerio]
Length = 355
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/185 (61%), Positives = 136/185 (73%), Gaps = 2/185 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYG++ + LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGKLSYHVREKDIQRFFGGYGKLMETDLKNGYGFVEFEDTRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKG--IDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
ERV VE A+G DR G G R+ D+YGPP R+++RLIVENLS
Sbjct: 63 ERVIVEHARGPRRDRDGYGGGYGGFGGRSNSGYSSRSRSGRDKYGPPVRTEYRLIVENLS 122
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDM++ALDKLD ++NGR+IRL
Sbjct: 123 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMRRALDKLDVTDINGRKIRL 182
Query: 183 IEDKP 187
+EDKP
Sbjct: 183 VEDKP 187
>gi|198415633|ref|XP_002121331.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
[Ciona intestinalis]
Length = 292
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 145/208 (69%), Gaps = 29/208 (13%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G++V+IG L + RE D+E+F KG+G+IRD+ LKNG+GFVEF+D RDADDAVYE+N +
Sbjct: 1 MSGSRVFIGRLSHRARENDVERFFKGFGKIRDINLKNGYGFVEFDDSRDADDAVYEMNNR 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGY----------------------GSYRAPPPRRGW 98
L GERVTVE+A+G+ RS G R Y G R
Sbjct: 61 DLCGERVTVELARGVPRSS--GGRDYRPDFRNDYRNDYRRRDDRGGGGGGRVNYFDSRAI 118
Query: 99 GHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFE 158
G +YGPPTR+++R+IVENLS+RVSWQDLKD++R+ GEV YADAHK RNEGVV+F
Sbjct: 119 G-----KYGPPTRTNYRVIVENLSTRVSWQDLKDYLREAGEVTYADAHKHRRNEGVVDFA 173
Query: 159 SSSDMKKALDKLDNAELNGRRIRLIEDK 186
+ DMK+A+DKLDN E+NGR+IRLIED+
Sbjct: 174 TYDDMKRAIDKLDNTEINGRKIRLIEDR 201
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1 [Oryzias
latipes]
Length = 372
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 134/184 (72%), Gaps = 8/184 (4%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L Y RE+D+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE KG R G G Y DRYGPP R+D+RLIVENLSS
Sbjct: 62 GERVIVEHTKGPRRDGGYGGGGRSGYGR--------WGGRDRYGPPVRTDYRLIVENLSS 113
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+MRQ GEV YAD HK RNEGV+EF SDMK+AL+KLD E+NGR+IRLI
Sbjct: 114 RCSWQDLKDYMRQAGEVTYADTHKGRRNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLI 173
Query: 184 EDKP 187
ED+P
Sbjct: 174 EDRP 177
>gi|241846316|ref|XP_002415562.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215509774|gb|EEC19227.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 355
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 124/200 (62%), Positives = 148/200 (74%), Gaps = 28/200 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T+VYIG L Y VRERDLEKF +G+G+IR+V+LKNGFGFVEF+D RDADDAVYELNG+ L
Sbjct: 4 TRVYIGHLSYRVRERDLEKFFRGFGKIREVLLKNGFGFVEFDDDRDADDAVYELNGRELD 63
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG----WGHDRD------------DRYG 107
GER + GRR GS R PR G +GH + +RYG
Sbjct: 64 GERYFTTL----------GRRA-GS-RNGTPRPGCAQLYGHVSNCFRLFGRATAPVNRYG 111
Query: 108 PPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKAL 167
PPTR+D+R+I+ENLSSR+SWQDLKD MRQVG+V YADAH+R RNEGVVEF S SDM++A+
Sbjct: 112 PPTRTDYRVIIENLSSRISWQDLKDRMRQVGDVTYADAHRRKRNEGVVEFASYSDMRRAI 171
Query: 168 DKLDNAELNGRRIRLIEDKP 187
DKLDN ELNGRRIR+IE+KP
Sbjct: 172 DKLDNTELNGRRIRVIEEKP 191
>gi|442749577|gb|JAA66948.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 268
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/198 (58%), Positives = 139/198 (70%), Gaps = 26/198 (13%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+V+IG L VRE+DL+KF KGYGR+ D+ LKNGFGFVEF+D+RDADDA+ +LNGK
Sbjct: 1 MTTRVFIGHLSCQVREKDLDKFFKGYGRVGDIHLKNGFGFVEFDDHRDADDAISDLNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPR-------------RGWGHDRDDRYGP 108
LLGERV+VE+A YGS R P R R RD R+GP
Sbjct: 61 LLGERVSVELA-------------YGSRRGPGGRIVPPRPDWRSPPPRRPFAPRDTRFGP 107
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALD 168
P R++++LIVENLSS VSWQDLKD+MRQ GEV YADAHK NEGVVEF + SDMK A+
Sbjct: 108 PQRTEYQLIVENLSSHVSWQDLKDYMRQAGEVTYADAHKIRPNEGVVEFANYSDMKNAIS 167
Query: 169 KLDNAELNGRRIRLIEDK 186
KLDN +L+GRRIRL E+K
Sbjct: 168 KLDNTDLSGRRIRLYEEK 185
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3 [Oryzias
latipes]
Length = 388
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 134/184 (72%), Gaps = 8/184 (4%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L Y RE+D+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE KG R G G Y DRYGPP R+D+RLIVENLSS
Sbjct: 62 GERVIVEHTKGPRRDGGYGGGGRSGYGR--------WGGRDRYGPPVRTDYRLIVENLSS 113
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+MRQ GEV YAD HK RNEGV+EF SDMK+AL+KLD E+NGR+IRLI
Sbjct: 114 RCSWQDLKDYMRQAGEVTYADTHKGRRNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLI 173
Query: 184 EDKP 187
ED+P
Sbjct: 174 EDRP 177
>gi|260819154|ref|XP_002604902.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
gi|229290231|gb|EEN60912.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
Length = 289
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 137/195 (70%), Gaps = 16/195 (8%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+G++VYIG LPY RE+D+E+F +GYGRIR++ LKNGFGFVEF+D RDADDAVYELNGK
Sbjct: 1 MGSRVYIGRLPYHAREKDVERFFRGYGRIREINLKNGFGFVEFDDPRDADDAVYELNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD-----------DRYGPPT 110
L GERV VE + G R GW + +RYGPP
Sbjct: 61 LCGERVIVE-----NARGPARGGGGFRGGGYGYRPGWLDNGRGSGGGRGSDSRNRYGPPV 115
Query: 111 RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKL 170
R+D+RLIVENLSSR SWQDLKD+MRQ GEV YADAHK+++NEG+VEF + DM+ AL KL
Sbjct: 116 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKQNKNEGIVEFATYRDMENALRKL 175
Query: 171 DNAELNGRRIRLIED 185
D E+NGR+I+L+ED
Sbjct: 176 DGTEINGRKIKLVED 190
>gi|338721826|ref|XP_001500325.3| PREDICTED: serine/arginine-rich splicing factor 4 [Equus caballus]
Length = 497
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/164 (65%), Positives = 126/164 (76%), Gaps = 12/164 (7%)
Query: 26 GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGI--DRSQERGR 83
GYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L GERV VE A+G D S GR
Sbjct: 20 GYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGR 79
Query: 84 RGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYA 143
GYG R+ D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YA
Sbjct: 80 SGYGYRRSGR----------DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYA 129
Query: 144 DAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
DAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL+EDKP
Sbjct: 130 DAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKP 173
>gi|198432077|ref|XP_002131581.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 332
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 138/196 (70%), Gaps = 12/196 (6%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G ++++G L Y RE D+E+F KG+GRI D+ +KNGF FVEF+D RDADDAVYE+N +
Sbjct: 1 MSGRRIFVGRLSYRAREGDIERFFKGFGRITDINIKNGFCFVEFDDSRDADDAVYEMNNQ 60
Query: 61 SLLGERVTVEIAKGIDR-SQERGRRGYGSYRAPPPR----------RGWGHDRDDRYGPP 109
L GERVTVE+AKG R QER G G RG+G R ++ PP
Sbjct: 61 MLCGERVTVELAKGTQRWGQERRDYGGGRDYGRGDYGGGYGGRNNDRGFGR-RQSKFAPP 119
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDK 169
R+++R+IVENLS+RV+WQ+LKD +RQ GE+ YADAHK RNEGVV+F S DMK A++K
Sbjct: 120 MRTEYRVIVENLSTRVAWQELKDHLRQAGEITYADAHKHRRNEGVVDFASYDDMKNAIEK 179
Query: 170 LDNAELNGRRIRLIED 185
+N ELNGR+IRL+ED
Sbjct: 180 FNNTELNGRKIRLVED 195
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/195 (60%), Positives = 138/195 (70%), Gaps = 10/195 (5%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RERD+EKF KGYGRIR+V LKNGFGFVEF+D RDADDAVYELNGK
Sbjct: 1 MSGCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDPRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRG---------YGSYR-APPPRRGWGHDRDDRYGPPT 110
L ERVT+E A+ G + SYR RRG G RYGPP
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGGGGRFSPRFSSYRQGSGDRRGGGGGGSSRYGPPV 120
Query: 111 RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKL 170
R++HR+IVENLSSR+SWQDLKD MR+VGEV + DAH+ ++NEGVVEF S SDMK ALDKL
Sbjct: 121 RTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNKNEGVVEFASHSDMKNALDKL 180
Query: 171 DNAELNGRRIRLIED 185
D +LNGR+++L ED
Sbjct: 181 DGTDLNGRKLKLSED 195
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MSGCRVFIGHLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ G R RYGPP R++HRLIVEN
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGYRP-SRSSGPRYGPPVRTEHRLIVEN 119
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSR+SWQDLKD MR+ GEV + DAH+ ++NEGVVEF S SDMK A+ K D ELNGR++
Sbjct: 120 LSSRISWQDLKDMMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKSAISKFDGTELNGRKL 179
Query: 181 RLIED 185
++ ED
Sbjct: 180 KVFED 184
>gi|340378226|ref|XP_003387629.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Amphimedon
queenslandica]
Length = 309
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 134/182 (73%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+++YIG LPY RE+D+E+F +G+GRIRD+ LKNGFGFVEF+DYRDA+DAVYEL+G+ LL
Sbjct: 5 SRIYIGRLPYQAREKDVERFFRGFGRIRDINLKNGFGFVEFDDYRDAEDAVYELHGRELL 64
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE A+G + R G R G +YGPP R+D R++VEN+SS
Sbjct: 65 GERVIVEHARGNRDRDDYRDRRGGGRDFRQDRGRDGRSNASKYGPPLRTDFRILVENVSS 124
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
RVSWQDLKDFMR GE+ YADAHK+ EG+VE+ + DMK A+ KL+ +LNGR+IRLI
Sbjct: 125 RVSWQDLKDFMRTAGEITYADAHKQKTGEGIVEYATYEDMKNAIRKLNGTDLNGRKIRLI 184
Query: 184 ED 185
ED
Sbjct: 185 ED 186
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Oreochromis
niloticus]
Length = 293
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/270 (47%), Positives = 164/270 (60%), Gaps = 26/270 (9%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +++IG L RE+D+E+F KGYGRIRD+ LK GFGFVEF+D RDA+DAVYEL+GK
Sbjct: 1 MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG-HDRDDRYGPPTRSDHRLIVE 119
L ERVT+E A+ + RGR G G R G G + R PP R+++RLIVE
Sbjct: 61 ELCNERVTIEHAR-VRLRGGRGRGGGGGGGRFSDRYGRGSQNSRSRNPPPMRTENRLIVE 119
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
NLSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S SD+K ALDKL E+NGR+
Sbjct: 120 NLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASHSDLKNALDKLSGKEINGRK 179
Query: 180 IRLIEDKPRGGGRGRSRS------------------------SSSRSRSKSRSRSRSSKS 215
I+LIE + + + +RS+SRS S + +
Sbjct: 180 IKLIEAAKKRSRSRSRSESSSRSRSRSRGRSASRSPRRSRSPAKAHNRSRSRSGSPAGGA 239
Query: 216 RSPRSRSKSGSPRKSKSKAKSVSRSPSPSK 245
SP S+SK + R SK + SP+P++
Sbjct: 240 SSPTSKSKEPAKRSSKMSKSATPPSPAPAQ 269
>gi|47087341|ref|NP_998631.1| serine/arginine-rich splicing factor 6a [Danio rerio]
gi|32822789|gb|AAH55238.1| Splicing factor, arginine/serine-rich 6a [Danio rerio]
Length = 347
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 126/183 (68%), Gaps = 30/183 (16%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYG++ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLLEVDLKNGYGFVEFEDTRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
R R G D+YGPP R+++RLIVENLSSR
Sbjct: 63 -------------YSSRSRTG-----------------RDKYGPPVRTEYRLIVENLSSR 92
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDM++AL+KLD ++NGR+IRL+E
Sbjct: 93 CSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMRRALEKLDGTDINGRKIRLVE 152
Query: 185 DKP 187
DKP
Sbjct: 153 DKP 155
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1 [Oreochromis
niloticus]
Length = 390
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 134/184 (72%), Gaps = 9/184 (4%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L Y RE+D+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE +G R G G G R R YGPP R+D+RLIVENLSS
Sbjct: 62 GERVIVEHTRGPRRDGGYGGGGGGYGRWGGRDR---------YGPPIRTDYRLIVENLSS 112
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+MRQ GEV YAD HK +NEGV+EF SDMK+AL+KLD E+NGR+IRLI
Sbjct: 113 RCSWQDLKDYMRQAGEVTYADTHKGRKNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRLI 172
Query: 184 EDKP 187
ED+P
Sbjct: 173 EDRP 176
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 139/184 (75%), Gaps = 5/184 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VY+G L Y RE+D+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYVGKLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDLC 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
G+RV VE G +R G S R+ RG G DRYGPPTR+D+RLIVENLSS
Sbjct: 62 GKRVIVEHTIG-----QRRDGGNRSGRSNRYGRGGGGGGGDRYGPPTRTDYRLIVENLSS 116
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+MRQ GEV YAD +K +NEGV+EF SDMK+AL+KLD E+NGR+IRLI
Sbjct: 117 RCSWQDLKDYMRQAGEVTYADTNKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLI 176
Query: 184 EDKP 187
ED+P
Sbjct: 177 EDRP 180
>gi|432882993|ref|XP_004074180.1| PREDICTED: uncharacterized protein LOC101163182 isoform 4 [Oryzias
latipes]
Length = 344
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 127/184 (69%), Gaps = 32/184 (17%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L Y RE+D+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
G YG WG DRYGPP R+D+RLIVENLSS
Sbjct: 62 G---------------------YGR---------WGGR--DRYGPPVRTDYRLIVENLSS 89
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+MRQ GEV YAD HK RNEGV+EF SDMK+AL+KLD E+NGR+IRLI
Sbjct: 90 RCSWQDLKDYMRQAGEVTYADTHKGRRNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLI 149
Query: 184 EDKP 187
ED+P
Sbjct: 150 EDRP 153
>gi|427777525|gb|JAA54214.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 333
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 140/211 (66%), Gaps = 44/211 (20%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+V++G L Y VRERDLE+F +GYGRI D++LKNGFGFV+ DYRDA+DAV +LNGK
Sbjct: 1 MATRVFVGRLNYDVRERDLERFFRGYGRIEDIVLKNGFGFVDISDYRDAEDAVRDLNGKR 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD-RYGPPTRSDHRLIVE- 119
L+GERVTVE+A+G+ RRG PP +DR R+GPPTR++++L+VE
Sbjct: 61 LMGERVTVELARGM-------RRG------PP-----DYDRGPRRFGPPTRTNYQLLVEN 102
Query: 120 ------------------------NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVV 155
NLS+ VSWQDLKDFMRQ G+V Y DAHK R++GVV
Sbjct: 103 LSTSVSWQDLKDFMRQAGDVTYTXNLSTSVSWQDLKDFMRQAGDVTYTDAHKLRRHQGVV 162
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
EF S SDMK AL LDN L+GRRIRL+E K
Sbjct: 163 EFASYSDMKNALRSLDNVSLDGRRIRLVETK 193
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 135/184 (73%), Gaps = 4/184 (2%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +++IG L RE+D+E+F KGYGRIRD+ LK GFGFVEF+D RDA+DAVYEL+GK
Sbjct: 1 MSGCRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A R + RG RG G P R G G R PP R+++RLIVEN
Sbjct: 61 ELCNERVTIEHA----RVRLRGGRGRGGGGRFPARYGRGSQDSRRNPPPMRTENRLIVEN 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ + NEGVVEF S SD+K AL+KL E+NGR+I
Sbjct: 117 LSSRVSWQDLKDFMRQAGEVTFADAHRPNLNEGVVEFASHSDLKNALEKLSGKEINGRKI 176
Query: 181 RLIE 184
+L+E
Sbjct: 177 KLVE 180
>gi|348515955|ref|XP_003445505.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oreochromis niloticus]
Length = 258
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 123/185 (66%), Gaps = 32/185 (17%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ER S P +RYGPP R+DHRL+VEN
Sbjct: 61 ELCSER---------------------SLSGP-----------NRYGPPVRTDHRLVVEN 88
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSR SWQDLKD MR+ GEV + DAH+ +NEGVVEF S SDMK A+ KLD ELNGR++
Sbjct: 89 LSSRTSWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRSDMKNAISKLDGTELNGRKL 148
Query: 181 RLIED 185
++ ED
Sbjct: 149 KMFED 153
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 132/195 (67%), Gaps = 24/195 (12%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +++IG L RE+D+E+F KGYGRIRD+ LK GFGFVEF+D RDA+DAVYEL+GK
Sbjct: 1 MSGCRIFIGRLSPTAREKDVERFFKGYGRIRDIDLKKGFGFVEFDDPRDAEDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG-----------PP 109
L ERVT+E A+ R R G G + DRYG PP
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRRPGGGRF-------------SDRYGRGSQSSRSRNPPP 107
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDK 169
R+++RLIVENLSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S SD+K AL+K
Sbjct: 108 VRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEK 167
Query: 170 LDNAELNGRRIRLIE 184
L E+NGR+I+LIE
Sbjct: 168 LSGKEMNGRKIKLIE 182
>gi|52345470|ref|NP_001004783.1| serine/arginine-rich splicing factor 5 [Xenopus (Silurana)
tropicalis]
gi|49522053|gb|AAH74518.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
gi|89273344|emb|CAJ81460.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 272
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 131/184 (71%), Gaps = 4/184 (2%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEF+D RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ + G G Y R R DR PP R+++RLIVEN
Sbjct: 61 ELCNERVTIEHAR-LRSRGGPRGLGRGRYND---RFSSRRPRGDRSAPPIRTENRLIVEN 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S SD+K A++KL E+NGR+I
Sbjct: 117 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKI 176
Query: 181 RLIE 184
+LIE
Sbjct: 177 KLIE 180
>gi|327281934|ref|XP_003225700.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Anolis
carolinensis]
Length = 266
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 131/185 (70%), Gaps = 7/185 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGS-YRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
L ERVT+E A+ R Y + + PR D R PP R+++RLIVE
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVE 114
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
NLSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S SD+K A++KL E+NGR+
Sbjct: 115 NLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRK 174
Query: 180 IRLIE 184
I+LIE
Sbjct: 175 IKLIE 179
>gi|410897813|ref|XP_003962393.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Takifugu
rubripes]
Length = 288
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 130/185 (70%), Gaps = 1/185 (0%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MSGCRVFIGHLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ G G G RYGPP R++HRLIVEN
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGG-GGGGGYRYGPPVRTEHRLIVEN 119
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSR+SWQDLKD MR+ GEV + DAH+ ++NEGVVEF S SDMK A+ K D ELNGR++
Sbjct: 120 LSSRISWQDLKDMMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKSAISKFDGTELNGRKL 179
Query: 181 RLIED 185
++ ED
Sbjct: 180 KVFED 184
>gi|395504171|ref|XP_003756430.1| PREDICTED: serine/arginine-rich splicing factor 5 [Sarcophilus
harrisii]
Length = 266
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 131/184 (71%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S SD+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|126282694|ref|XP_001370225.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Monodelphis
domestica]
Length = 265
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 131/184 (71%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S SD+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|348515953|ref|XP_003445504.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oreochromis niloticus]
Length = 295
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 130/190 (68%), Gaps = 5/190 (2%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+D+RDADDAVYELNGK
Sbjct: 1 MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKG-----IDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
L ERVT+E A+ R G G R RYGPP R+DHR
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGYRQSRSSGSSRYGPPVRTDHR 120
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L+VENLSSR SWQDLKD MR+ GEV + DAH+ +NEGVVEF S SDMK A+ KLD EL
Sbjct: 121 LVVENLSSRTSWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRSDMKNAISKLDGTEL 180
Query: 176 NGRRIRLIED 185
NGR++++ ED
Sbjct: 181 NGRKLKMFED 190
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Metaseiulus
occidentalis]
Length = 303
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 134/186 (72%), Gaps = 19/186 (10%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G L + RERDLE+ YGRIR+++LK+GF FVEFED RDA+DA YELNGK LLG
Sbjct: 8 RLYVGRLSHRTRERDLERLFSPYGRIREILLKSGFAFVEFEDTRDAEDACYELNGKDLLG 67
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPR----RGWGHDRDDRYGPPTRSDHRLIVEN 120
+R+ VE+AKG ERGR G P R +GW D+YGP R+D+R+IV N
Sbjct: 68 DRIVVEMAKG----TERGRGGL------PMRGQRDKGWM----DKYGPFKRTDYRVIVGN 113
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
LS+RVSWQDLKD MR+VG EVCYADAHK +NE V+EF + SDMK+A+ K D E+NGR+
Sbjct: 114 LSTRVSWQDLKDMMRKVGCEVCYADAHKHRKNEAVIEFATRSDMKRAIQKYDGHEVNGRK 173
Query: 180 IRLIED 185
+ + ED
Sbjct: 174 MEVHED 179
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 136/190 (71%), Gaps = 6/190 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G ++++G L RE+D+E+F KGYGRIRD+ LK GFGFVEF+D RDA+DAVYEL+GK
Sbjct: 1 MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK 60
Query: 61 SLLGERVTVEIAK-----GIDRSQERGRRGYGSYRAPPPRRGWG-HDRDDRYGPPTRSDH 114
L ERVT+E A+ G R +RG G G P R G G D R PP R+++
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGRFPDRYGRGSQDSRSRNPPPMRTEN 120
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
RLIVENLSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S SD+K AL+KL E
Sbjct: 121 RLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGKE 180
Query: 175 LNGRRIRLIE 184
+NGR+I+LIE
Sbjct: 181 INGRKIKLIE 190
>gi|432107111|gb|ELK32534.1| Serine/arginine-rich splicing factor 5 [Myotis davidii]
Length = 280
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|348573304|ref|XP_003472431.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cavia
porcellus]
Length = 273
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|291410875|ref|XP_002721708.1| PREDICTED: splicing factor, arginine/serine-rich 5 [Oryctolagus
cuniculus]
Length = 275
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|402876562|ref|XP_003902030.1| PREDICTED: serine/arginine-rich splicing factor 5 [Papio anubis]
Length = 272
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|119601416|gb|EAW81010.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Homo
sapiens]
Length = 209
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPR------NDRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|307133720|ref|NP_001182516.1| splicing factor, arginine/serine-rich 5 [Equus caballus]
Length = 271
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|307133730|ref|NP_001182521.1| splicing factor, arginine/serine-rich 5 [Pongo abelii]
gi|109084084|ref|XP_001109903.1| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 2
[Macaca mulatta]
gi|297298154|ref|XP_001110094.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 3
[Macaca mulatta]
gi|297298156|ref|XP_001110146.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 4
[Macaca mulatta]
gi|119601409|gb|EAW81003.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Homo
sapiens]
Length = 271
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|149643059|ref|NP_001092399.1| serine/arginine-rich splicing factor 5 [Bos taurus]
gi|73963391|ref|XP_867135.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 9 [Canis
lupus familiaris]
gi|301763317|ref|XP_002917076.1| PREDICTED: splicing factor, arginine/serine-rich 5-like [Ailuropoda
melanoleuca]
gi|345803610|ref|XP_867196.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 15 [Canis
lupus familiaris]
gi|410962543|ref|XP_003987828.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Felis
catus]
gi|410962545|ref|XP_003987829.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Felis
catus]
gi|410962547|ref|XP_003987830.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 3 [Felis
catus]
gi|148878097|gb|AAI46186.1| SFRS5 protein [Bos taurus]
gi|281349392|gb|EFB24976.1| hypothetical protein PANDA_005250 [Ailuropoda melanoleuca]
gi|296482956|tpg|DAA25071.1| TPA: splicing factor, arginine/serine-rich 5 [Bos taurus]
gi|440897364|gb|ELR49075.1| Serine/arginine-rich splicing factor 5 [Bos grunniens mutus]
Length = 272
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|86991438|ref|NP_001034554.1| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|86991440|ref|NP_008856.2| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|296215383|ref|XP_002754098.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Callithrix jacchus]
gi|332229001|ref|XP_003263676.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Nomascus leucogenys]
gi|332229003|ref|XP_003263677.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Nomascus leucogenys]
gi|332842591|ref|XP_510034.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 6 [Pan
troglodytes]
gi|332842593|ref|XP_001143701.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Pan
troglodytes]
gi|390469250|ref|XP_002754097.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Callithrix jacchus]
gi|397507326|ref|XP_003824150.1| PREDICTED: serine/arginine-rich splicing factor 5 [Pan paniscus]
gi|403264529|ref|XP_003924530.1| PREDICTED: serine/arginine-rich splicing factor 5 [Saimiri
boliviensis boliviensis]
gi|426377318|ref|XP_004055414.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Gorilla gorilla gorilla]
gi|426377320|ref|XP_004055415.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Gorilla gorilla gorilla]
gi|3929378|sp|Q13243.1|SRSF5_HUMAN RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|1049080|gb|AAA93070.1| SRp40-1 [Homo sapiens]
gi|17511888|gb|AAH18823.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|30583017|gb|AAP35752.1| splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|61362109|gb|AAX42162.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|61362114|gb|AAX42163.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|71297198|gb|AAH40209.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|90075796|dbj|BAE87578.1| unnamed protein product [Macaca fascicularis]
gi|119601408|gb|EAW81002.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601411|gb|EAW81005.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601412|gb|EAW81006.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|208967490|dbj|BAG73759.1| splicing factor, arginine/serine-rich 5 [synthetic construct]
gi|355693393|gb|EHH27996.1| hypothetical protein EGK_18328 [Macaca mulatta]
gi|355778697|gb|EHH63733.1| hypothetical protein EGM_16760 [Macaca fascicularis]
gi|380815560|gb|AFE79654.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815562|gb|AFE79655.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815564|gb|AFE79656.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420727|gb|AFH33577.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420729|gb|AFH33578.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420731|gb|AFH33579.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|410218428|gb|JAA06433.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410218430|gb|JAA06434.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252412|gb|JAA14173.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252414|gb|JAA14174.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303912|gb|JAA30556.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303914|gb|JAA30557.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357772|gb|JAA44585.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357774|gb|JAA44586.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410358000|gb|JAA44587.1| splicing factor, arginine/serine-rich 5 [Pan troglodytes]
Length = 272
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|119226243|ref|NP_001073162.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226245|ref|NP_033185.2| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226247|ref|NP_001073163.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|158631248|ref|NP_062130.2| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774128|ref|NP_001182434.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774130|ref|NP_001182435.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|354472150|ref|XP_003498303.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cricetulus
griseus]
gi|1168968|sp|Q09167.1|SRSF5_RAT RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Insulin-induced growth response protein CL-4;
AltName: Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|349079|gb|AAA62266.1| growth response protein [Rattus norvegicus]
gi|34849628|gb|AAH58479.1| Sfrs5 protein [Rattus norvegicus]
gi|52139013|gb|AAH82593.1| Splicing factor, arginine/serine-rich 5 (SRp40, HRS) [Mus musculus]
gi|74144656|dbj|BAE27313.1| unnamed protein product [Mus musculus]
gi|148670738|gb|EDL02685.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670740|gb|EDL02687.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670743|gb|EDL02690.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670745|gb|EDL02692.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670746|gb|EDL02693.1| mCG7614, isoform CRA_a [Mus musculus]
gi|149025034|gb|EDL81401.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|149025037|gb|EDL81404.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|344235744|gb|EGV91847.1| Splicing factor, arginine/serine-rich 5 [Cricetulus griseus]
Length = 269
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|335292735|ref|XP_001927454.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Sus
scrofa]
gi|335292737|ref|XP_001927469.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Sus
scrofa]
Length = 272
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|12841460|dbj|BAB25217.1| unnamed protein product [Mus musculus]
gi|148670741|gb|EDL02688.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670742|gb|EDL02689.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670747|gb|EDL02694.1| mCG7614, isoform CRA_c [Mus musculus]
Length = 270
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|351708666|gb|EHB11585.1| Splicing factor, arginine/serine-rich 5 [Heterocephalus glaber]
Length = 270
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRSAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|417398268|gb|JAA46167.1| Putative serine/arginine-rich splicing factor 5 [Desmodus rotundus]
Length = 278
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPR------NDRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|30583835|gb|AAP36166.1| Homo sapiens splicing factor, arginine/serine-rich 5 [synthetic
construct]
gi|60653861|gb|AAX29623.1| splicing factor arginine/serine-rich 5 [synthetic construct]
Length = 273
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|395849594|ref|XP_003797407.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Otolemur garnettii]
gi|395849596|ref|XP_003797408.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Otolemur garnettii]
Length = 270
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|335307313|ref|XP_003360793.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Sus scrofa]
Length = 221
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|345793997|ref|XP_865416.2| PREDICTED: serine/arginine-rich splicing factor 4 isoform 3 [Canis
lupus familiaris]
Length = 469
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/156 (64%), Positives = 119/156 (76%), Gaps = 12/156 (7%)
Query: 34 ILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPP 93
+L +GFVEF+D RDADDAVYELNGK L GERV VE A+G R YGS R+
Sbjct: 1 MLTEAYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDG-----SYGSGRS-- 53
Query: 94 PRRGWGHDRD--DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRN 151
G+G+ R D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YADAHK +N
Sbjct: 54 ---GYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN 110
Query: 152 EGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
EGV+EF S SDMK+AL+KLD E+NGR+IRL+EDKP
Sbjct: 111 EGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKP 146
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2 [Oreochromis
niloticus]
Length = 386
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 130/184 (70%), Gaps = 13/184 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L Y RE+D+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE +G R G G G R P R+D+RLIVENLSS
Sbjct: 62 GERVIVEHTRGPRRDGGYGGGGGGGGRDRYGP-------------PIRTDYRLIVENLSS 108
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+MRQ GEV YAD HK +NEGV+EF SDMK+AL+KLD E+NGR+IRLI
Sbjct: 109 RCSWQDLKDYMRQAGEVTYADTHKGRKNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRLI 168
Query: 184 EDKP 187
ED+P
Sbjct: 169 EDRP 172
>gi|344273957|ref|XP_003408785.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Loxodonta
africana]
Length = 271
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRI+D+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIKDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|342326382|gb|AEL23106.1| hnRNP protein [Cherax quadricarinatus]
Length = 284
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 135/179 (75%), Gaps = 12/179 (6%)
Query: 7 YIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGER 66
Y+GGL Y V ERDL++F + YGR+RD+++KNGFGFVEF+D RDADDAVYE+NGK LLG R
Sbjct: 1 YVGGLSYRVGERDLDRFFRSYGRLRDIVIKNGFGFVEFDDDRDADDAVYEMNGKELLGGR 60
Query: 67 VTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVS 126
VTVE A+ R + RAPPPR G+ R+G R+D+RL VE+LSSRVS
Sbjct: 61 VTVEKARAAPRMRWP--------RAPPPR-GF---HSSRFGMAARTDYRLTVEDLSSRVS 108
Query: 127 WQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
WQDLKDFMRQ GEV YADAHK RNEGVVEF + +DMK A+ +LD EL+GRRIRL+++
Sbjct: 109 WQDLKDFMRQAGEVTYADAHKYRRNEGVVEFATYADMKNAMHRLDGKELHGRRIRLVDE 167
>gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 119/157 (75%), Gaps = 12/157 (7%)
Query: 33 VILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGI--DRSQERGRRGYGSYR 90
+L +GFVEF+D RDADDAVYELNGK L GERV VE A+G D S GR GYG YR
Sbjct: 31 TVLGQRYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYG-YR 89
Query: 91 APPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHR 150
R G D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YADAHK +
Sbjct: 90 ----RSGR-----DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK 140
Query: 151 NEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
NEGV+EF S SDMK+AL+KLD E+NGR+IRL+EDKP
Sbjct: 141 NEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKP 177
>gi|426233598|ref|XP_004023549.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 5 [Ovis aries]
Length = 274
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 129/184 (70%), Gaps = 6/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYG IRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGXIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 174
Query: 181 RLIE 184
+LIE
Sbjct: 175 KLIE 178
>gi|354472339|ref|XP_003498397.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cricetulus
griseus]
Length = 476
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 125/170 (73%), Gaps = 13/170 (7%)
Query: 21 EKFVKGYGRIRDVIL-KNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGI--DR 77
E V G + DV + G+GFVEF+D RDADDAVYELNGK L GERV VE A+G D
Sbjct: 3 ELLVCGNCQFADVKEPQAGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDG 62
Query: 78 SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQV 137
S GR GYG YR R G D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ
Sbjct: 63 SYGSGRSGYG-YR----RSGR-----DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQA 112
Query: 138 GEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL+EDKP
Sbjct: 113 GEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKP 162
>gi|449488807|ref|XP_002189002.2| PREDICTED: serine/arginine-rich splicing factor 4 [Taeniopygia
guttata]
Length = 446
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 116/151 (76%), Gaps = 12/151 (7%)
Query: 39 FGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRR 96
+GFVEF+D RDADDAVYELNGK L GERV VE A+G D S GR GYG R+
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDSSYGSGRSGYGYRRSGR--- 62
Query: 97 GWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVE 156
D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YADAHK +NEGV+E
Sbjct: 63 -------DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIE 115
Query: 157 FESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
F+S SDMK+AL+KLD E+NGR+IRL+ED+P
Sbjct: 116 FKSYSDMKRALEKLDGTEVNGRKIRLMEDRP 146
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 126/185 (68%), Gaps = 21/185 (11%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+G++VY G LP+ RERDLE+F +G+GRIR+++L+ G+ FVEF+DYRDA+DA+YELNG
Sbjct: 1 MGSRVYAGKLPHDTRERDLERFFEGFGRIREILLRRGYAFVEFDDYRDAEDAIYELNGAK 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
LLG+R+ VE K PPR G +R PP R+ HRLIVENL
Sbjct: 61 LLGQRIVVEATK------------------RPPRFGGSSNRPK---PPQRTYHRLIVENL 99
Query: 122 SSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
SSR+ W++LK +MR+ G V +ADAH+ NEGVVEF S DMK+AL D+ ELNGR IR
Sbjct: 100 SSRIDWRELKAYMRKAGNVTFADAHRDRMNEGVVEFASRHDMKQALKMFDDTELNGRYIR 159
Query: 182 LIEDK 186
L E++
Sbjct: 160 LYEER 164
>gi|426222714|ref|XP_004005530.1| PREDICTED: uncharacterized protein LOC101109078 [Ovis aries]
Length = 437
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 117/157 (74%), Gaps = 12/157 (7%)
Query: 33 VILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGI--DRSQERGRRGYGSYR 90
+L +GFVEF+D RDADDAVYELNGK L GERV VE A+G D S GR GYG R
Sbjct: 17 TVLGQRYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRR 76
Query: 91 APPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHR 150
+ D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YADAHK +
Sbjct: 77 SGR----------DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK 126
Query: 151 NEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
NEGV+EF S SDMK+AL+KLD E+NGR+IRL+EDKP
Sbjct: 127 NEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKP 163
>gi|345315998|ref|XP_001512981.2| PREDICTED: hypothetical protein LOC100082305, partial
[Ornithorhynchus anatinus]
Length = 393
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 115/151 (76%), Gaps = 12/151 (7%)
Query: 39 FGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRR 96
+GFVEF+D RDADDAVYELNGK L GERV VE A+G D S GR GYG R+
Sbjct: 26 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGR--- 82
Query: 97 GWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVE 156
D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YADAHK +NEGV+E
Sbjct: 83 -------DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIE 135
Query: 157 FESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
F S SDMK+AL+KLD E+NGR+IRL+ED+P
Sbjct: 136 FVSYSDMKRALEKLDGTEVNGRKIRLVEDRP 166
>gi|395522106|ref|XP_003765081.1| PREDICTED: serine/arginine-rich splicing factor 4 [Sarcophilus
harrisii]
Length = 338
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/152 (65%), Positives = 116/152 (76%), Gaps = 12/152 (7%)
Query: 38 GFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGI--DRSQERGRRGYGSYRAPPPR 95
G+GFVEF+D RDADDAVYELNGK L GERV VE A+G D S GR GYG R+
Sbjct: 31 GYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGR-- 88
Query: 96 RGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVV 155
D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YADAHK +NEGV+
Sbjct: 89 --------DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVI 140
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
EF S SDMK+AL+KLD E+NGR+IRL+ED+P
Sbjct: 141 EFVSYSDMKRALEKLDGTEVNGRKIRLVEDRP 172
>gi|89267363|emb|CAJ82789.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 115/160 (71%), Gaps = 3/160 (1%)
Query: 29 RIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGS 88
RIR++ LKNGFGFVEF+D+RDADDAVYELNGK L ERVT+E A+ G G
Sbjct: 1 RIREINLKNGFGFVEFDDHRDADDAVYELNGKVLCNERVTIEHARNRRGRGGMMGGGGGG 60
Query: 89 YRAPPPRRGWGHDRD---DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA 145
P R + RYGPP R++HR+IVENLSSRVSWQDLKDFMR+ GEV Y DA
Sbjct: 61 GGRYPNRFAYRQSNSGGPSRYGPPVRTEHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDA 120
Query: 146 HKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
H+ +RNEGVVEF S +DMK ALDKLD EL+GR+I+L ED
Sbjct: 121 HRSNRNEGVVEFASYTDMKNALDKLDGVELSGRKIKLTED 160
>gi|119628062|gb|EAX07657.1| splicing factor, arginine/serine-rich 4, isoform CRA_a [Homo
sapiens]
Length = 484
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/151 (65%), Positives = 117/151 (77%), Gaps = 12/151 (7%)
Query: 39 FGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGW 98
+GFVEF+D RDADDAVYELNGK L GERV VE A+G R YGS R+ G+
Sbjct: 27 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDG-----SYGSGRS-----GY 76
Query: 99 GHDRD--DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVE 156
G+ R D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YADAHK +NEGV+E
Sbjct: 77 GYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIE 136
Query: 157 FESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
F S SDMK+AL+KLD E+NGR+IRL+EDKP
Sbjct: 137 FVSYSDMKRALEKLDGTEVNGRKIRLVEDKP 167
>gi|417410943|gb|JAA51935.1| Putative serine/arginine-rich splicing factor 4, partial [Desmodus
rotundus]
Length = 467
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/151 (65%), Positives = 115/151 (76%), Gaps = 12/151 (7%)
Query: 39 FGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRR 96
+GFVEF+D RDADDAVYELNGK L GERV VE A+G D S GR GYG R+
Sbjct: 1 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGR--- 57
Query: 97 GWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVE 156
D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YADAHK +NEGV+E
Sbjct: 58 -------DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIE 110
Query: 157 FESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
F S SDMK+AL+KLD E+NGR+IRL+EDKP
Sbjct: 111 FVSYSDMKRALEKLDGTEVNGRKIRLVEDKP 141
>gi|449502419|ref|XP_004174507.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Taeniopygia guttata]
Length = 265
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 129/184 (70%), Gaps = 7/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E RG G Y R DR + PP R+++RLIVEN
Sbjct: 61 ELCSERVTIE-----HARARSRGRGRGRYSDRFSSRRPRSDRRN--APPLRTENRLIVEN 113
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S SD+K A++KL E+NGR+I
Sbjct: 114 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKI 173
Query: 181 RLIE 184
+LIE
Sbjct: 174 KLIE 177
>gi|224051266|ref|XP_002200500.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Taeniopygia guttata]
Length = 264
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 129/184 (70%), Gaps = 7/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E RG G Y R DR + PP R+++RLIVEN
Sbjct: 61 ELCSERVTIE-----HARARSRGRGRGRYSDRFSSRRPRSDRRN--APPLRTENRLIVEN 113
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S SD+K A++KL E+NGR+I
Sbjct: 114 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKI 173
Query: 181 RLIE 184
+LIE
Sbjct: 174 KLIE 177
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 168/269 (62%), Gaps = 19/269 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VY+G +P ERD+E+F KGYGR+RD++LKNG+GFVEF++ +DADDAVY+L+G+ L
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GER+ VE A+ + G R G G G RD RYGPPTR+++R+IVENLSS
Sbjct: 62 GERLIVEHAR-LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSS 120
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
RVSWQDLKD MR+ GEV YADAHK +N+G+VEF + +DMK+A++K D EL GRR+R+
Sbjct: 121 RVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDGYELYGRRLRVY 180
Query: 184 EDKP-----------------RGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGS 226
ED+P R R +SRS RS S RS S +GS
Sbjct: 181 EDRPGQRSRSGSFRSRSDSRHSHRSRSRDSHRRQKSRSPRHRHDRSFSSDRHRSESGNGS 240
Query: 227 PRKSKSKAKSV-SRSPSPSKTRKRSRSRS 254
R+S+ + SRSPS RS +RS
Sbjct: 241 HRRSRENSNDGRSRSPSHRSGTNRSNARS 269
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 168/269 (62%), Gaps = 19/269 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VY+G +P ERD+E+F KGYGR+RD++LKNG+GFVEF++ +DADDAVY+L+G+ L
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GER+ VE A+ + G R G G G RD RYGPPTR+++R+IVENLSS
Sbjct: 62 GERLIVEHAR-LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSS 120
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
RVSWQDLKD MR+ GEV YADAHK +N+G+VEF + +DMK+A++K D EL GRR+R+
Sbjct: 121 RVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDGYELYGRRLRVY 180
Query: 184 EDKP-----------------RGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGS 226
ED+P R R +SRS RS S RS S +GS
Sbjct: 181 EDRPGQRSRSGSFRSRSDSRHSHRSRSRDSHRRQKSRSPRHRHDRSFSSDRHRSESGNGS 240
Query: 227 PRKSKSKAKSV-SRSPSPSKTRKRSRSRS 254
R+S+ + SRSPS RS +RS
Sbjct: 241 HRRSRENSNDGRSRSPSHRSGTNRSNARS 269
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 168/269 (62%), Gaps = 19/269 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VY+G +P ERD+E+F KGYGR+RD++LKNG+GFVEF++ +DADDAVY+L+G+ L
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GER+ VE A+ + G R G G G RD RYGPPTR+++R+IVENLSS
Sbjct: 62 GERLIVEHAR-LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSS 120
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
RVSWQDLKD MR+ GEV YADAHK +N+G+VEF + +DMK+A++K D EL GRR+R+
Sbjct: 121 RVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDGYELYGRRLRVY 180
Query: 184 EDKP-----------------RGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGS 226
ED+P R R +SRS RS S RS S +GS
Sbjct: 181 EDRPGQRSRSGSFRSRSDSRHSHRSRSRDSHRRQKSRSPRHRHDRSFSSDRHRSESGNGS 240
Query: 227 PRKSKSKAKSV-SRSPSPSKTRKRSRSRS 254
R+S+ + SRSPS RS +RS
Sbjct: 241 HRRSRENSNDGRSRSPSHRSGANRSNARS 269
>gi|156358473|ref|XP_001624543.1| predicted protein [Nematostella vectensis]
gi|156211330|gb|EDO32443.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 130/179 (72%), Gaps = 8/179 (4%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T+VY G LP RERDLEKFV+GYGR+R++ +K G+GFVEF+DYRDADD VY+LNG++LL
Sbjct: 5 TRVYFGRLPRDCRERDLEKFVRGYGRVREISMKLGYGFVEFDDYRDADDCVYDLNGRNLL 64
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE ++ R + G R S R+ RRG PP R++HRL VENLSS
Sbjct: 65 GERVVVEHSRNPSRGSDYGYRRDSSSRSRSSRRG--------RTPPIRTEHRLAVENLSS 116
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
R +WQDLK++M +VGEV +ADAHKR + EGVVEF + DMK AL KLD+ E G+RIRL
Sbjct: 117 RSNWQDLKEYMGKVGEVTFADAHKRRQGEGVVEFATKDDMKTALKKLDDTEFFGKRIRL 175
>gi|160333128|ref|NP_001026368.2| splicing factor, arginine/serine-rich 5 [Gallus gallus]
Length = 264
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 130/184 (70%), Gaps = 7/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R + RGR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGRGRGRYSDRFSSR-------RPRSDRRSAPPLRTENRLIVEN 113
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S SD+K A++KL E+NGR+I
Sbjct: 114 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKI 173
Query: 181 RLIE 184
+LIE
Sbjct: 174 KLIE 177
>gi|198432071|ref|XP_002131223.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 277
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 138/212 (65%), Gaps = 25/212 (11%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G++V+IG L E D+E+F KG+GRIR+V LK G+GFVEFE+ RDA+DAVYE+N +
Sbjct: 16 MAGSRVFIGRLSNRATESDVERFFKGFGRIREVKLKTGYGFVEFEENRDAEDAVYEMNNQ 75
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRY-------------- 106
SL GERVTVE AKG R R G R G D+ Y
Sbjct: 76 SLCGERVTVEHAKGTPRRGGDFRGGGSYGRGGGGGGGNYRGYDNNYGGRNGGGFRGGRDD 135
Query: 107 -----------GPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVV 155
GPP+R+ +R+IVENLSSRVSWQDLKD++RQ G+V +A+AH+ +NEG+V
Sbjct: 136 RFGGGRGSGRFGPPSRTKYRVIVENLSSRVSWQDLKDYLRQAGDVSFAEAHQSVQNEGIV 195
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
+F + DMK A++KLD+ EL+GR+IRLIEDKP
Sbjct: 196 DFATYDDMKAAIEKLDDTELSGRKIRLIEDKP 227
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/183 (56%), Positives = 135/183 (73%), Gaps = 5/183 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+++++G LP VRE D+EKF++GYG+IRD+ LK G+GFVEF+D+RDA+DAV++LNG+ L+
Sbjct: 2 SRIFLGRLPRDVRESDVEKFLRGYGKIRDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLI 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE +KG R E G R R R G R YGPP R+++ +IVENLSS
Sbjct: 62 GERVVVEFSKG--RRSEGGGR---DRRDFSGRGGRDGGRRPIYGPPVRTNYSVIVENLSS 116
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+ R+ G+V YADAHK+ EGVVEFES D+ A++KLD+ EL GRRIR+
Sbjct: 117 RTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIEKLDDTELGGRRIRVY 176
Query: 184 EDK 186
EDK
Sbjct: 177 EDK 179
>gi|156402467|ref|XP_001639612.1| predicted protein [Nematostella vectensis]
gi|156226741|gb|EDO47549.1| predicted protein [Nematostella vectensis]
Length = 174
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 129/185 (69%), Gaps = 16/185 (8%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGR--IRDVILKNGFGFVEFEDYRDADDAVYELNG 59
+ +VY+G LPYG RE D++KF YGR IR++ILK+G+GFVEF+ DA+DAVYE NG
Sbjct: 1 MSNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKDGYGFVEFDYSDDAEDAVYECNG 60
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
K +LGER+ VE A+G + GY S R R D+YGPP R+ R+ VE
Sbjct: 61 KKMLGERILVEPARGTSKG------GYSSGRRGRAR--------DKYGPPLRTPWRMTVE 106
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
NLSSRVSWQDLKD+ RQ+G+V Y DAHK+ + EGV+EF + D+KKAL KLD EL G+R
Sbjct: 107 NLSSRVSWQDLKDYCRQIGDVTYGDAHKQKQGEGVIEFATKKDLKKALRKLDGKELKGKR 166
Query: 180 IRLIE 184
IRLI+
Sbjct: 167 IRLID 171
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/269 (46%), Positives = 168/269 (62%), Gaps = 19/269 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VY+G +P ERD+E+F KGYGR+RD++LKNG+GFVEF++ +DADDAVY+L+G+ L
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GER+ VE A+ + G R G G G RD RYGPPTR+++R+IVENLSS
Sbjct: 62 GERLIVEHAR-LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSS 120
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
RVSWQ+LKD MR+ GEV YADAHK +N+G+VEF + +DMK+A++K D EL GRR+R+
Sbjct: 121 RVSWQELKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDGYELYGRRLRVY 180
Query: 184 EDKP-----------------RGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGS 226
ED+P R R +SRS RS S RS S +GS
Sbjct: 181 EDRPGQRSRSGSFRSRSDSRHSHRSRSRDSHRRQKSRSPRHRHDRSFSSDRHRSESGNGS 240
Query: 227 PRKSKSKAKSV-SRSPSPSKTRKRSRSRS 254
R+S+ + SRSPS RS +RS
Sbjct: 241 HRRSRENSNDGRSRSPSHRSGTNRSNARS 269
>gi|449274700|gb|EMC83778.1| Splicing factor, arginine/serine-rich 5 [Columba livia]
Length = 265
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 7/184 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEF+D RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R + RGR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGRGRGRYSDRFSSR-------RPRSDRRSAPPLRTENRLIVEN 113
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S SD+K A++KL E+NGR+I
Sbjct: 114 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKI 173
Query: 181 RLIE 184
+LIE
Sbjct: 174 KLIE 177
>gi|256077392|ref|XP_002574989.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229591|emb|CCD75762.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 370
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 132/196 (67%), Gaps = 29/196 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VY+G +P ERD+E+F KGYGR+RD++LKNG+GFVEF++ +DADDAVY+L+G+ L
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG------------PPTR 111
GER+ VE A R PP RG G PPTR
Sbjct: 62 GERLIVEHA-----------------RLPPGTRGGSRRAGGGGGGGGGGSGRDRYGPPTR 104
Query: 112 SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLD 171
+++R+IVENLSSRVSWQDLKD MR+ GEV YADAHK +N+G+VEF + +DMK+A++K D
Sbjct: 105 TEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFD 164
Query: 172 NAELNGRRIRLIEDKP 187
EL GRR+R+ ED+P
Sbjct: 165 GYELYGRRLRVYEDRP 180
>gi|225718228|gb|ACO14960.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 355
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 133/182 (73%), Gaps = 6/182 (3%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-FGFVEFEDYRDADDAVYELNGKS 61
G++V++G LPY VRERD+E+F + YGR+ ++ +K+G +GF EF+DYRDADDAVY+LNG
Sbjct: 6 GSRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGKYGFCEFDDYRDADDAVYKLNGGE 65
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
L GER+TVE A+G R++ RG G G G GPPTR+++R+IVENL
Sbjct: 66 LNGERITVEHARGGRRAEGRGGGFRGDRNRGRGVGGRGKY-----GPPTRTNYRVIVENL 120
Query: 122 SSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
SSRVSWQDLKD MR+ GEV +ADAH RNEGVVEF S DM +A++K DN EL GRRIR
Sbjct: 121 SSRVSWQDLKDVMRRAGEVTFADAHNDRRNEGVVEFISRRDMDRAIEKFDNHELQGRRIR 180
Query: 182 LI 183
L+
Sbjct: 181 LV 182
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 371
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 136/184 (73%), Gaps = 4/184 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VY+G +P ERD+E+F KGYGR+RD++LKNG+GFVEF++ +DADDAVY+L+G+ L
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GER+ VE A R R G G G RD RYGPPTR+++R+IVENLSS
Sbjct: 62 GERLIVEHA----RLPPGTRGGSRRAGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSS 117
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
RVSWQDLKD MR+ GEV YADAHK +N+G+VEF + +DMK+A++K D EL GRR+R+
Sbjct: 118 RVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDGYELYGRRLRVY 177
Query: 184 EDKP 187
ED+P
Sbjct: 178 EDRP 181
>gi|225712276|gb|ACO11984.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 329
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 132/183 (72%), Gaps = 2/183 (1%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-FGFVEFEDYRDADDAVYELNGKS 61
G +V++G LPY VRERD+E+F + YGR+ ++ +K+G +GF EF+DYRDADDAVY+LNG
Sbjct: 6 GCRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGKYGFCEFDDYRDADDAVYKLNGCE 65
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG-PPTRSDHRLIVEN 120
L ER+TVE A+G R++ R G G R G PPTR+++R+IVEN
Sbjct: 66 LNSERITVEHARGGRRAEGRSSGGSGGGGGYRGDRYRGRRGGRGKYGPPTRTNYRVIVEN 125
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LS+RVSWQDLKD MR+ GEV +ADAH RNEGVVEF S DM++A+DK DN EL+GRRI
Sbjct: 126 LSTRVSWQDLKDVMRRAGEVTFADAHNDKRNEGVVEFISRRDMERAIDKFDNHELHGRRI 185
Query: 181 RLI 183
RL+
Sbjct: 186 RLV 188
>gi|345309522|ref|XP_001517768.2| PREDICTED: serine/arginine-rich splicing factor 5-like, partial
[Ornithorhynchus anatinus]
Length = 251
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/168 (60%), Positives = 122/168 (72%), Gaps = 6/168 (3%)
Query: 17 ERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGID 76
E+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK L ERVT+E A+
Sbjct: 1 EKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARS 60
Query: 77 RSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQ 136
R R + + PR D R PP R+++RLIVENLSSRVSWQDLKDFMRQ
Sbjct: 61 RGGRGRGRYSDRFSSRRPRN------DRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQ 114
Query: 137 VGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
GEV +ADAH+ NEGVVEF S SD+K A++KL E+NGR+I+LIE
Sbjct: 115 AGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIE 162
>gi|290562251|gb|ADD38522.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 331
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 133/185 (71%), Gaps = 4/185 (2%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-FGFVEFEDYRDADDAVYELNGKS 61
G +V++G LPY VRERD+E+F + YGR+ ++ +K+G +GF EF+DYRDADDAVY+LNG
Sbjct: 6 GCRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGKYGFCEFDDYRDADDAVYKLNGCE 65
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG---PPTRSDHRLIV 118
L ER+TVE A+G R++ R G G R R G PPTR+++R+IV
Sbjct: 66 LNSERITVEHARGGRRAEGRSSGGSGGGGGGGYRGDRYRGRGGGRGKYGPPTRTNYRVIV 125
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
ENLS+RVSWQDLKD MR+ GEV +ADAH RNEGVVEF S DM++A+DK DN EL+GR
Sbjct: 126 ENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRNEGVVEFISRRDMERAIDKFDNHELHGR 185
Query: 179 RIRLI 183
RIRL+
Sbjct: 186 RIRLV 190
>gi|226471686|emb|CAX70924.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 371
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 161/284 (56%), Gaps = 50/284 (17%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VY+G +P ERD+E+F KGYGR+RD++LKNG+GFVEF++ +DADDAVY+L+G+ L
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG---------------P 108
GER+ VE A R PP RG G P
Sbjct: 62 GERLIVEHA-----------------RLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRYGP 104
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALD 168
PTR+++R+IVENLSSRVSWQDLKD R+ GEV YADAHK +N+G+VEF + +DMK+A++
Sbjct: 105 PTRTEYRVIVENLSSRVSWQDLKDLTRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIE 164
Query: 169 KLDNAELNGRRIRLIEDKP-----------------RGGGRGRSRSSSSRSRSKSRSRSR 211
K D EL GRR+R+ ED+P R R +SRS R
Sbjct: 165 KFDGYELYGRRLRVYEDRPGQRSRSGSFRSRSDSRHSHRSRSRDSHRRQKSRSPRHRHDR 224
Query: 212 SSKSRSPRSRSKSGSPRKSKSKAKSV-SRSPSPSKTRKRSRSRS 254
S S RS S +GS R+S+ + SRSPS RS +RS
Sbjct: 225 SFSSDRHRSESGNGSHRRSRENSNDGRSRSPSHRSGTNRSNARS 268
>gi|53130660|emb|CAG31659.1| hypothetical protein RCJMB04_9e4 [Gallus gallus]
Length = 165
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/166 (57%), Positives = 118/166 (71%), Gaps = 10/166 (6%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V++G L RERD+EKF KGYGRIR++ LKNGFGFVEFED+RDADDA+YELNGK
Sbjct: 1 MSGCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ +R SY + RYGPP R++HR+IVEN
Sbjct: 61 ELCDERVTIEHARARRGRGRFAQR--FSYYSQSG--------SSRYGPPVRTEHRIIVEN 110
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKA 166
LSSR+SWQDLKD MR+ GEV Y DAH+ +RNEGVVEF S SD+++
Sbjct: 111 LSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDIEEC 156
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 124/179 (69%), Gaps = 8/179 (4%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L + RE D+E F +GYG+I D++LKNGFGFV F+D RDADDA+++LNGKSL
Sbjct: 5 SRVYIGRLSHRARENDVEHFFRGYGKINDLMLKNGFGFVIFDDERDADDAIHDLNGKSLC 64
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV +EIAKG RG G + R G P +RLIVENLSS
Sbjct: 65 GERVMLEIAKGTP-------RGPGGESSSSSYYQQQQPRSSTKGIPNHG-YRLIVENLSS 116
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
RV+WQDLKD+MRQ GEV YADA++ RNEGVVEF S +MK A++KL+ E+NGR I+L
Sbjct: 117 RVTWQDLKDYMRQCGEVVYADANRYRRNEGVVEFSSRKEMKYAIEKLNGTEINGRHIKL 175
>gi|119596372|gb|EAW75966.1| splicing factor, arginine/serine-rich 6, isoform CRA_c [Homo
sapiens]
Length = 383
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
Query: 9 GGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVT 68
GG +G R ++ R+ +GFVEFED RDADDAVYELNGK L GERV
Sbjct: 46 GGARWGTGARTCASWLTTPPRLSGPRTAPRYGFVEFEDSRDADDAVYELNGKELCGERVI 105
Query: 69 VEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQ 128
VE A+G R ++ G S D+YGPP R+++RLIVENLSSR SWQ
Sbjct: 106 VEHARGPRRDRDGYSYGSRSGGGG--YSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQ 163
Query: 129 DLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKPR 188
DLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIEDKPR
Sbjct: 164 DLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPR 223
>gi|363742346|ref|XP_417747.3| PREDICTED: serine/arginine-rich splicing factor 4 [Gallus gallus]
Length = 214
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/149 (64%), Positives = 113/149 (75%), Gaps = 18/149 (12%)
Query: 39 FGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGW 98
+GFVEF+D RDADDAVYELNGK L GERV VE A RG RGYG R+
Sbjct: 4 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA--------RGPRGYGYRRSGR----- 50
Query: 99 GHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFE 158
D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YADAHK +NEGV+EF+
Sbjct: 51 -----DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFK 105
Query: 159 SSSDMKKALDKLDNAELNGRRIRLIEDKP 187
S SDMK+AL+KLD E+NGR+IRL+ED+P
Sbjct: 106 SYSDMKRALEKLDGTEVNGRKIRLVEDRP 134
>gi|332858668|ref|XP_003317036.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 407
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 110/171 (64%), Gaps = 44/171 (25%)
Query: 39 FGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGW 98
+GFVEFED RDADDAVYELNGK L GERV VE A+G PRR
Sbjct: 100 YGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG-------------------PRR-- 138
Query: 99 GHDRD---------------------DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQV 137
DRD D+YGPP R+++RLIVENLSSR SWQDLKDFMRQ
Sbjct: 139 --DRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQA 196
Query: 138 GEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKPR 188
GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIEDKPR
Sbjct: 197 GEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPR 247
>gi|355721871|gb|AES07404.1| splicing factor SRp55-1 [Mustela putorius furo]
Length = 250
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 100/150 (66%), Positives = 109/150 (72%), Gaps = 2/150 (1%)
Query: 39 FGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGW 98
+GFVEFED RDADDAVYELNGK L GERV VE A+G R +R YGS
Sbjct: 1 YGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRR--DRDGYSYGSRXGGGGYSSR 58
Query: 99 GHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFE 158
D+YGPP R++ RLIVENLSSR SWQDLKDFMRQ GEV YADAHK NEGV+EF
Sbjct: 59 RTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFR 118
Query: 159 SSSDMKKALDKLDNAELNGRRIRLIEDKPR 188
S SDMK+ALDKLD E+NGR IRLIEDKPR
Sbjct: 119 SYSDMKRALDKLDGTEINGRNIRLIEDKPR 148
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 123/180 (68%), Gaps = 2/180 (1%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L + RE D+E F +GYG+I D++LKNGFGFV F+D RDADDA+++LNGKSL
Sbjct: 5 SRVYIGRLSHRARENDVEHFFRGYGKINDLMLKNGFGFVIFDDERDADDAIHDLNGKSLC 64
Query: 64 GERVTVEIAKGIDRSQ-ERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
GERV +EIAKG R R + R G P +RLIVENLS
Sbjct: 65 GERVMLEIAKGTPRGPGGDRRESSSRRSSSSSYYQQQQPRSSTKGIPNHG-YRLIVENLS 123
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SRV+WQDLKD+MRQ GEV YADA++ RNEGVVEF S +MK A++KL+ E+NGR I+L
Sbjct: 124 SRVTWQDLKDYMRQCGEVVYADANRYRRNEGVVEFSSRKEMKYAIEKLNGTEINGRHIKL 183
>gi|170594581|ref|XP_001902042.1| Splicing factor, arginine/serine-rich 4 [Brugia malayi]
gi|158590986|gb|EDP29601.1| Splicing factor, arginine/serine-rich 4, putative [Brugia malayi]
Length = 347
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/243 (44%), Positives = 135/243 (55%), Gaps = 67/243 (27%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ +VY+G L Y ERD+E F +GYGRIRD++LKNGFGFVEF+D RDADDAVYELNGK
Sbjct: 4 MSARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKNGFGFVEFDDPRDADDAVYELNGKE 63
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSY-RAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L GERV +E + R R R G+G + R PPPRR + YGPP ++ +RLIVEN
Sbjct: 64 LCGERVILEFS----RRGPRSRMGFGGFDRFPPPRR----ESRLVYGPPQQTRYRLIVEN 115
Query: 121 LSS-------------------RVSWQ--------------------------------- 128
LSS RV W
Sbjct: 116 LSSRSFFFSVASNARCLDSLMKRVRWLRNSVHEDKAEVKAPNWPGGSRELVQLKMVYRWC 175
Query: 129 ------DLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
DLKD MR GEV +ADAHK+H NEG+V F + D+++ALDKL E+NGR+++L
Sbjct: 176 VGVLLLDLKDIMRTAGEVTFADAHKQHPNEGIVCFLTRDDLERALDKLQGKEVNGRKLKL 235
Query: 183 IED 185
I+D
Sbjct: 236 IDD 238
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 124/183 (67%), Gaps = 9/183 (4%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T+VY+G L Y RERD+E F +G+G+IR+V LKNGFGFVEF+D RDA+DA+YELN + L+
Sbjct: 2 TRVYVGRLSYRARERDVEHFFRGFGKIREVTLKNGFGFVEFDDPRDAEDAIYELNNRDLM 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GERV VE AKG R G+Y P R+G P ++ RL++ NLSS
Sbjct: 62 GERVIVEFAKGTRYDDRR-----GAYPLITPSYLLFR---PRFGRPRNTEWRLVINNLSS 113
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
R +W+D+KD+MRQ G+V +ADAHK+ GVV+F + DMK AL +LD EL GR++RL
Sbjct: 114 RATWRDIKDYMRQAGDVTFADAHKQLGEGRGVVDFATYDDMKDALKRLDGTELCGRKVRL 173
Query: 183 IED 185
ED
Sbjct: 174 TED 176
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 137/210 (65%), Gaps = 18/210 (8%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M T+VY+G L +RE DLE F KGYGRIR++ LKNG+GFVEF++ RDADDAV++LNGK
Sbjct: 1 MESTRVYVGQLTSDIRENDLENFFKGYGRIREITLKNGYGFVEFDERRDADDAVHDLNGK 60
Query: 61 SLLGERVTVEIAKGIDR------------SQERGRRGYGSYRAPPPRRGWGHDRDDRYGP 108
LLGE++ VE+A R + G RGY R G +R P
Sbjct: 61 PLLGEKIRVEMAHRFSRDRFASGRGGGFRGRYNGDRGYDR-----SRHGGRWERRRPVNP 115
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALD 168
P RS +RL+VENLSS +SW++LKDFM Q GEVC+ D + + R EG+VEFESSS M+ AL
Sbjct: 116 PRRSRYRLLVENLSSAISWRELKDFMNQAGEVCFTDVYPQRR-EGIVEFESSSAMENALK 174
Query: 169 KLDNAELNGRRIRLIEDKPRGGGRGRSRSS 198
KL+ ELNGRRIR+ E+K R+R+S
Sbjct: 175 KLNGEELNGRRIRITEEKLDSNKSNRNRNS 204
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 116/183 (63%), Gaps = 36/183 (19%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L G
Sbjct: 1 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 60
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
ERV VE A+G PR RD YG + I+
Sbjct: 61 ERVIVEHARG-------------------PR------RDGSYGSGRSKHSKGIL------ 89
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
L D+MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL+E
Sbjct: 90 -----LSDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVE 144
Query: 185 DKP 187
DKP
Sbjct: 145 DKP 147
>gi|55824572|gb|AAV66406.1| splicing factor arginine/serine-rich protein 5 [Macaca
fascicularis]
Length = 208
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 114/160 (71%), Gaps = 6/160 (3%)
Query: 25 KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRR 84
KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK L ERVT+E A+ R R
Sbjct: 1 KGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGR 60
Query: 85 GYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYAD 144
+ + PR D R PP R+++RLIVENLSSRVSWQDLKDFMRQ GEV +AD
Sbjct: 61 YSDRFSSRRPRN------DRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFAD 114
Query: 145 AHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
AH+ NEGVVEF S D+K A++KL E+NGR+I+LIE
Sbjct: 115 AHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE 154
>gi|62089194|dbj|BAD93041.1| CS0DF038YO05 variant [Homo sapiens]
Length = 326
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 130/235 (55%), Gaps = 57/235 (24%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 4 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 63
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 64 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPR------NDRRNAPPVRTENRLIVEN 117
Query: 121 LSSRVSWQ---------------------------------------------------D 129
LSSRVSWQ D
Sbjct: 118 LSSRVSWQVCILIEYKCGKCHVCTLSNIFSFSSLVFFISCDCLCVPFPLLCLTQLSCVKD 177
Query: 130 LKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
LKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I+LIE
Sbjct: 178 LKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE 232
>gi|2435503|gb|AAC39946.1| HRS [Mus musculus]
Length = 270
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 129/185 (69%), Gaps = 7/185 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ ++ RG RG G Y G+DR R ++ +RLIVEN
Sbjct: 61 ELCSERVTIEHAR----ARSRGGRGRGRYSDRLAVADLGNDR--RKCSTCKNRNRLIVEN 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLD-NAELNGRR 179
LSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL +L G +
Sbjct: 115 LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSWKRKLTGEK 174
Query: 180 IRLIE 184
+LIE
Sbjct: 175 SKLIE 179
>gi|327284522|ref|XP_003226986.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 195
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 122/183 (66%), Gaps = 9/183 (4%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
VYIG L +R++E F KGYG+I +V LKNG+GF+EF D DADDAV+ELNGK L G+
Sbjct: 4 VYIGHLSNQAHKRNMEPF-KGYGKIVEVDLKNGYGFLEFGDVCDADDAVHELNGKDLCGD 62
Query: 66 RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRV 125
V VE G R SY + G+ D+ GPPT +++RLI ENL+
Sbjct: 63 HVIVE--------HTWGPRCDSSYSSGRSGYGYRRSGRDKNGPPTHTEYRLIDENLTGCC 114
Query: 126 SWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
+WQDLKD+M Q GEV YADAH +NEGV+EF+S SDMK+AL+ LD E+NGR++RL+ED
Sbjct: 115 NWQDLKDYMHQAGEVTYADAHNGRKNEGVIEFKSYSDMKRALENLDGTEVNGRKVRLVED 174
Query: 186 KPR 188
P
Sbjct: 175 MPE 177
>gi|449273171|gb|EMC82779.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 417
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/149 (65%), Positives = 116/149 (77%), Gaps = 12/149 (8%)
Query: 41 FVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGH 100
FVEF+D RDADDAVYELNGK L GERV VE A+G R YGS R+ G+G+
Sbjct: 1 FVEFDDVRDADDAVYELNGKDLCGERVIVEHARGPRRDS-----SYGSGRS-----GYGY 50
Query: 101 DRD--DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFE 158
R D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YADAHK +NEGV+EF+
Sbjct: 51 RRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFK 110
Query: 159 SSSDMKKALDKLDNAELNGRRIRLIEDKP 187
S SDMK+AL+KLD E+NGR+IRL+ED+P
Sbjct: 111 SYSDMKRALEKLDGTEVNGRKIRLVEDRP 139
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 128/184 (69%), Gaps = 3/184 (1%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+VYIG LP +RD+E F +GYG++ DVI+KNGFGFV+F+D RDADDAV++LNGK L
Sbjct: 2 VRVYIGRLPNRATDRDVEHFFRGYGKLVDVIMKNGFGFVDFQDQRDADDAVHDLNGKDLC 61
Query: 64 GERVTVEIA-KGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
GERV +E + + ++ER GY R P RRG +RY P + RL+++NLS
Sbjct: 62 GERVILEFPRRKVGYNEERSGSGYRG-REPTFRRGGERQFSNRYSRPCSTRFRLVIDNLS 120
Query: 123 SRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
+R SWQD+KD +R++G E Y++AHKR+ N+ +V F + D+++A++KL ELNGR+++
Sbjct: 121 TRFSWQDIKDHIRKLGIEPTYSEAHKRNVNQALVCFSTHDDLREAMNKLQGEELNGRKLK 180
Query: 182 LIED 185
++
Sbjct: 181 CTDE 184
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 127/184 (69%), Gaps = 3/184 (1%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+VYIG LP +RD+E F +GYG++ DVI+KNGFGFV+F+D RDADDAV++LNGK L
Sbjct: 2 VRVYIGRLPNRATDRDVEHFFRGYGKLVDVIMKNGFGFVDFQDQRDADDAVHDLNGKDLC 61
Query: 64 GERVTVEIA-KGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
GERV +E + + ++ER GY R P RRG +RY P + RL+V+NLS
Sbjct: 62 GERVILEFPRRKVGYNEERSGGGYRG-REPTFRRGGERQFSNRYSRPCSTRFRLVVDNLS 120
Query: 123 SRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
+R SWQD+KD +R++G E Y++AHKR+ N+ +V F + D++ A++KL ELNGR+++
Sbjct: 121 TRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQALVCFSTHDDLRDAMNKLQGEELNGRKLK 180
Query: 182 LIED 185
++
Sbjct: 181 CTDE 184
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 131/208 (62%), Gaps = 27/208 (12%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++YIG L V E+D+E F +GYG+IRDV+LKNGFGFVEF+D RDA+DAV++LNGK
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQER-------------------GRRGYGSYRAPPPRRGWGHDR 102
L G+RV ++ +K GR + Y PPR R
Sbjct: 61 LGGDRVILDYSKPRGGGGSGGGYGDRRGGGRVSSYSGGGGRDRFDRYDRGPPR------R 114
Query: 103 DDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSS 161
+ RYG P + HR++VENLSSR+SWQDLKD +R+ G E YA+AHKR NE ++ F + S
Sbjct: 115 ESRYGRPYSTRHRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRP-NEALLCFATPS 173
Query: 162 DMKKALDKLDNAELNGRRIRLIEDKPRG 189
D+K+ +DK D +LNGR+I++++D G
Sbjct: 174 DLKRCIDKCDGMDLNGRKIKMVDDSQAG 201
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding protein
srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 127/184 (69%), Gaps = 3/184 (1%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+VYIG LP +RD+E F +GYG++ DVI+KNGFGFV+F+D RDADDAV++LNGK L
Sbjct: 2 VRVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELC 61
Query: 64 GERVTVEIA-KGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
GERV +E + + ++ER G+ R P R+G +RY P + RL+++NLS
Sbjct: 62 GERVILEFPRRKVGYNEERSGSGFRG-REPTFRKGGERQFSNRYSRPCSTRFRLVIDNLS 120
Query: 123 SRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
+R SWQD+KD +R++G E Y++AHKR+ N+ +V F S D++ A++KL +LNGR+++
Sbjct: 121 TRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQAIVCFTSHDDLRDAMNKLQGEDLNGRKLK 180
Query: 182 LIED 185
++
Sbjct: 181 CTDE 184
>gi|268531976|ref|XP_002631116.1| C. briggsae CBR-RSP-2 protein [Caenorhabditis briggsae]
Length = 279
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 127/184 (69%), Gaps = 3/184 (1%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+VYIG LP +RD+E F +GYG++ DVI+KNGFGFV+F++ RDADDAV++LNGK L
Sbjct: 2 VRVYIGRLPNRATDRDVEHFFRGYGKLSDVIMKNGFGFVDFQEQRDADDAVHDLNGKDLC 61
Query: 64 GERVTVEIA-KGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
GERV +E + + ++ER G+ R P RRG +RY P + RL+++NLS
Sbjct: 62 GERVILEFPRRKVGYNEERSGGGFRG-REPTFRRGGERQFSNRYSRPCSTRFRLVIDNLS 120
Query: 123 SRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
+R SWQD+KD +R++G E Y++AHKR+ N+ +V F + D++ A++KL ELNGR+++
Sbjct: 121 TRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQALVCFSTHDDLRDAMNKLQGEELNGRKLK 180
Query: 182 LIED 185
++
Sbjct: 181 CTDE 184
>gi|320168404|gb|EFW45303.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 239
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 120/182 (65%), Gaps = 19/182 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++Y+G + RERD+E YGR RDV LKNGFGFVEF+D RDADDA+ +L+G+ +
Sbjct: 2 ARLYVGRVSADARERDVEHLFGKYGRTRDVTLKNGFGFVEFDDVRDADDAMRDLHGRDFM 61
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
G+R+ VE R+ GRR G R+ R+ PPTR+ +R++VENLS+
Sbjct: 62 GDRLIVE------RANSGGRRDR------------GEPRERRFAPPTRTQYRVLVENLST 103
Query: 124 RVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
R+SWQDLKDF+R G EV +ADAH+ GVVEF +S+DM+ A+ +LD +LNGR IRL
Sbjct: 104 RISWQDLKDFVRTCGVEVTFADAHRERDGTGVVEFANSTDMRHAIRRLDGKDLNGRDIRL 163
Query: 183 IE 184
E
Sbjct: 164 RE 165
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 131/207 (63%), Gaps = 26/207 (12%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++YIG L V E+D+E F +GYG IRDV+LKNGFGFVEF+D RDA+DAV++LNGK
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGNIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 62 LLGERVTVEIAKGIDRSQER-----------------GRRGYGSY-RAPPPRRGWGHDRD 103
L GERV ++ +K GR Y + R PPRR +
Sbjct: 61 LGGERVILDYSKPRGGGGFGGSGGRGGRVSSYSGGAGGRDRYDRFDRGGPPRR------E 114
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSD 162
RYG P + HR++VENLSSR+SWQDLKD +R+ G E YA+AHKR NE ++ F + SD
Sbjct: 115 SRYGRPYSTRHRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRP-NEALLCFATPSD 173
Query: 163 MKKALDKLDNAELNGRRIRLIEDKPRG 189
+K+ ++K D +LNGR+I++++D G
Sbjct: 174 LKRCIEKCDGMDLNGRKIKMLDDSQAG 200
>gi|17535711|ref|NP_496442.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
gi|56749460|sp|Q23121.1|RSP1_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 1;
AltName: Full=CeSRp75; AltName: Full=RNA-binding protein
srp-5
gi|3880429|emb|CAA91395.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
Length = 312
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 131/211 (62%), Gaps = 30/211 (14%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++YIG L V E+D+E F +GYG+IRDV+LKNGFGFVEF+D RDA+DAV++LNGK
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 62 LLGERVTVEIAK----------------------GIDRSQERGRRGYGSYRAPPPRRGWG 99
L GERV ++ +K GR + Y PPR
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPR---- 116
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFE 158
R+ RYG P + HR++VENLSSR+SWQDLKD +R+ G E YA+AHKR NE ++ F
Sbjct: 117 --RESRYGRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRP-NEALLCFA 173
Query: 159 SSSDMKKALDKLDNAELNGRRIRLIEDKPRG 189
+ SD+K+ ++K D +LNGR+I++I+D G
Sbjct: 174 TPSDLKRCIEKCDGMDLNGRKIKMIDDSQAG 204
>gi|156356000|ref|XP_001623720.1| predicted protein [Nematostella vectensis]
gi|156210446|gb|EDO31620.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 120/202 (59%), Gaps = 17/202 (8%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
KVY G LP E+DLE VK +G++R+V K G+ +V F++ +DAD AV LN G
Sbjct: 4 KVYCGRLPATATEKDLENLVKVFGKVREVDFKEGYAYVVFKENKDADRAVAALNNSEFHG 63
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
++ +E AK + R G G Y A G R + GPP RS+ R+IVENLS+R
Sbjct: 64 AKILMEKAKEM-------RNGVGGYTAA----GGYTARTRQMGPPVRSEFRVIVENLSTR 112
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
W +LK+FM GEVCYAD H+R EGVVEF + DMK+A+ LD E G+RIRL +
Sbjct: 113 AKWLELKEFMNNAGEVCYADTHRRRPGEGVVEFTTEEDMKRAIASLDKCEFYGKRIRLRQ 172
Query: 185 DKPRGGGRGRSRSSSSRSRSKS 206
+ PR G +S SRSRS S
Sbjct: 173 ELPRSG------TSKSRSRSPS 188
>gi|194901400|ref|XP_001980240.1| GG19772 [Drosophila erecta]
gi|195500858|ref|XP_002097554.1| GE26284 [Drosophila yakuba]
gi|190651943|gb|EDV49198.1| GG19772 [Drosophila erecta]
gi|194183655|gb|EDW97266.1| GE26284 [Drosophila yakuba]
Length = 135
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDR-DDRYGPPTRSDHRLIVE 119
LLGERV VE A+G R R R G +D+ RYGPP R+++RLIVE
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNDKSSSRYGPPLRTEYRLIVE 120
Query: 120 NLSSRVSWQDLKDF 133
NLSSRVSWQ L F
Sbjct: 121 NLSSRVSWQSLMCF 134
>gi|384494440|gb|EIE84931.1| hypothetical protein RO3G_09641 [Rhizopus delemar RA 99-880]
Length = 252
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 158/269 (58%), Gaps = 33/269 (12%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+VYIG L +RD+E+ K YG IR++ LK GFGFVEF D RDA D VY+ +GKS
Sbjct: 1 MSTRVYIGRLARDASKRDIERLFKNYGDIREINLKTGFGFVEFADERDAKDVVYDFHGKS 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
LGER+ VEIAKG R ER R G+DR +RS +RLIVEN+
Sbjct: 61 FLGERLIVEIAKGTRRHDER--------------RPRGNDR-------SRSHYRLIVENI 99
Query: 122 SSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
+ +WQDLKD MR+ GEV +AD + +EG+VEF DM+ AL KL++ ELNG+R++
Sbjct: 100 APGTNWQDLKDMMRKAGEVTFADISRDRPSEGIVEFHVRDDMEYALKKLNDRELNGQRVQ 159
Query: 182 LIEDKPRGGGRGRSRSSSSRSRSKSRSR------------SRSSKSRSPRSRSKSGSPRK 229
L ED + R SS SRSRS R R S KSR + + GS +
Sbjct: 160 LREDPNKISRSSRRSSSRSRSRSPPRRRRRSPSRSRSRSVSDRKKSRRDDTPERDGSRYR 219
Query: 230 SKSKAKSVSRSPSPSKTRKRSRSRSDSRA 258
++K++S SRS SP+++R S +RS+ A
Sbjct: 220 RRNKSESRSRSASPARSRGESPARSEGSA 248
>gi|346466769|gb|AEO33229.1| hypothetical protein [Amblyomma maculatum]
Length = 289
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 103/137 (75%), Gaps = 20/137 (14%)
Query: 55 YELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRA-----PPPRRGWGHDRDDRYGPP 109
YELNGK LLG+RV+VE+A+GI RRG YR+ PPRR RYGPP
Sbjct: 1 YELNGKELLGDRVSVELARGI-------RRGADYYRSRAASRSPPRR--------RYGPP 45
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDK 169
TR++++L VENLSSRVSWQDLKD+MRQ GEV YADAH+ RNEGVVEF + SDMK AL+K
Sbjct: 46 TRTEYQLTVENLSSRVSWQDLKDYMRQAGEVTYADAHRLRRNEGVVEFATYSDMKNALEK 105
Query: 170 LDNAELNGRRIRLIEDK 186
LDN +L+GRRIRLIE+K
Sbjct: 106 LDNTDLSGRRIRLIEEK 122
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 120/182 (65%), Gaps = 3/182 (1%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G + RERD+EKF KGYG++R++ LKNG+GFVEFED+RDADDAV +L+GK + G
Sbjct: 7 RLYLGNVSDETRERDVEKFFKGYGKLREIALKNGYGFVEFEDHRDADDAVQDLDGKDMNG 66
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVENLSS 123
RV VE A+ +RG Y S + + PP R + +R+ VENLSS
Sbjct: 67 SRVRVEFARSP--RDKRGGSRYPSTSSRRSPPRGRRGAPIKRNPPGRRTQYRIRVENLSS 124
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+ R G++ Y +AHK NEGVVEF M+ ALD+LD+ EL GRRIRL
Sbjct: 125 RASWQDLKDYFRSCGDITYTNAHKPRNNEGVVEFGDKRAMENALDRLDDTELAGRRIRLY 184
Query: 184 ED 185
E+
Sbjct: 185 EE 186
>gi|28571693|ref|NP_788669.1| B52, isoform D [Drosophila melanogaster]
gi|281361721|ref|NP_001163603.1| B52, isoform I [Drosophila melanogaster]
gi|195329208|ref|XP_002031303.1| GM24118 [Drosophila sechellia]
gi|195571105|ref|XP_002103544.1| GD18917 [Drosophila simulans]
gi|23171195|gb|AAN13577.1| B52, isoform D [Drosophila melanogaster]
gi|194120246|gb|EDW42289.1| GM24118 [Drosophila sechellia]
gi|194199471|gb|EDX13047.1| GD18917 [Drosophila simulans]
gi|272476965|gb|ACZ94900.1| B52, isoform I [Drosophila melanogaster]
Length = 135
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDR-DDRYGPPTRSDHRLIVE 119
LLGERV VE A+G R R R G +++ RYGPP R+++RLIVE
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLIVE 120
Query: 120 NLSSRVSWQDLKDF 133
NLSSRVSWQ L F
Sbjct: 121 NLSSRVSWQSLMCF 134
>gi|308509716|ref|XP_003117041.1| CRE-RSP-1 protein [Caenorhabditis remanei]
gi|308241955|gb|EFO85907.1| CRE-RSP-1 protein [Caenorhabditis remanei]
Length = 308
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 130/209 (62%), Gaps = 26/209 (12%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++YIG L V E+D+E F +GYG+IRDV+LKNGFGFVEF+D RDA+DAV++LNGK
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 62 LLGERVTVEIAK------------------GIDRSQERGRRGYGSYRAPPPRRGWGHDRD 103
L GERV ++ +K R R PP+ R+
Sbjct: 61 LGGERVILDYSKPRGGGGFSDRGGRGGGRVSSYGGGGGRDRFDRFDRGGPPK------RE 114
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSD 162
RYG P + HR++VENLSSR+SWQDLKD +R+ G E YA+AHKR NE ++ F S +D
Sbjct: 115 SRYGRPYSTRHRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRP-NEALLCFASPTD 173
Query: 163 MKKALDKLDNAELNGRRIRLIEDKPRGGG 191
+K+ ++K D +LNGR+I++I+D G G
Sbjct: 174 LKRCIEKCDGMDLNGRKIKMIDDSQAGSG 202
>gi|156402923|ref|XP_001639839.1| predicted protein [Nematostella vectensis]
gi|156226970|gb|EDO47776.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 122/182 (67%), Gaps = 11/182 (6%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G +V++G LP +RDLEKF KG+GRI D+ LK GF FVEF+D RDADDAVYELN K L
Sbjct: 5 GGRVFVGRLPPRANDRDLEKFFKGFGRINDINLKQGFAFVEFDDARDADDAVYELNHKEL 64
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
LGERV+VE A S+ G G +R PRR DRY PP +++RLIVENLS
Sbjct: 65 LGERVSVEHAHP---SRGGGGGGGRGFRDRSPRR-------DRY-PPYNTEYRLIVENLS 113
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
+R WQDLKD+MRQ GEV + HK EGV +F + SDM AL KLD EL G+RIRL
Sbjct: 114 TRAGWQDLKDYMRQAGEVTFTQCHKDRVGEGVCDFSNESDMLYALKKLDGTELFGKRIRL 173
Query: 183 IE 184
+E
Sbjct: 174 VE 175
>gi|221122641|ref|XP_002154006.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 259
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 128/183 (69%), Gaps = 4/183 (2%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G L V ERDL+KF YG+IRD+++KNG+ FV+F+DYRDADDAVY+LNGK L+G
Sbjct: 3 RLYVGRLNNRVIERDLKKFFDNYGKIRDIMMKNGYAFVDFDDYRDADDAVYDLNGKELMG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLS 122
+RV +E AKGI+R G YG R R G+G + D+YGPP R+ L VENLS
Sbjct: 63 DRVIIEHAKGIERGS--GGAPYGRERFKDDRSGFGRKQRARDKYGPPVRTKWMLRVENLS 120
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SRVSWQDLKD+ R EV YADAH++ R + + DMK + K+DN ELNG++IR+
Sbjct: 121 SRVSWQDLKDYCRPHAEVTYADAHRKERGVACICTSTYEDMKNLIRKIDNTELNGKKIRV 180
Query: 183 IED 185
++D
Sbjct: 181 LDD 183
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 121/182 (66%), Gaps = 7/182 (3%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G + RERD+EKF KGYG++R+V LKNG+GFVEFED+RDADDAV +L+GK + G
Sbjct: 7 RLYLGNISDDTRERDVEKFFKGYGKLREVALKNGYGFVEFEDHRDADDAVQDLDGKDMNG 66
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVENLSS 123
RV VE A+ ++R R Y++ + PP R + +R+ VENLS+
Sbjct: 67 SRVRVEFARSP--REKRNSR----YQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLST 120
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
R SWQDLKD+ R GE+ Y +AHK NEGVVEF M+ ALD+LD+ +L GRRI+L
Sbjct: 121 RTSWQDLKDYFRSCGEITYTNAHKPRNNEGVVEFGDKRAMENALDRLDDTDLGGRRIKLY 180
Query: 184 ED 185
E+
Sbjct: 181 EE 182
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 114 HRLIVENLSSRVSWQDLKDFMRQVG---EVCYADAHKRHRNEGVVEFESSSDMKKALDKL 170
HRL + N+S +D++ F + G EV + + G VEFE D A+ L
Sbjct: 6 HRLYLGNISDDTRERDVEKFFKGYGKLREVALKNGY------GFVEFEDHRDADDAVQDL 59
Query: 171 DNAELNGRRIRL 182
D ++NG R+R+
Sbjct: 60 DGKDMNGSRVRV 71
>gi|281345554|gb|EFB21138.1| hypothetical protein PANDA_005614 [Ailuropoda melanoleuca]
Length = 319
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 114/184 (61%), Gaps = 27/184 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG G E + G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGHGTPE----------------RXXRG 46
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
V +A+ G GY S RR G D+ YGPP R++ RLIVENLSSR
Sbjct: 47 LGCGVCLAR--VGVFGGGGGGYSS------RRTSGRDK---YGPPVRTEFRLIVENLSSR 95
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 96 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 155
Query: 185 DKPR 188
DKPR
Sbjct: 156 DKPR 159
>gi|28571695|ref|NP_788670.1| B52, isoform F [Drosophila melanogaster]
gi|281361723|ref|NP_001163604.1| B52, isoform K [Drosophila melanogaster]
gi|23171196|gb|AAN13578.1| B52, isoform F [Drosophila melanogaster]
gi|272476966|gb|ACZ94901.1| B52, isoform K [Drosophila melanogaster]
Length = 147
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDR-DDRYGPPTRSDHRLIVE 119
LLGERV VE A+G R R R G +++ RYGPP R+++RLIVE
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLIVE 120
Query: 120 NLSSRVSWQ 128
NLSSRVSWQ
Sbjct: 121 NLSSRVSWQ 129
>gi|391343504|ref|XP_003746049.1| PREDICTED: serine-arginine protein 55-like [Metaseiulus
occidentalis]
Length = 296
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 150/247 (60%), Gaps = 22/247 (8%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG LP G RE+D+EKF GRIR ++LK G+ FV+F RDA DAV+++NG+
Sbjct: 1 MSGNRVFIGRLPRGSREQDIEKFFSRCGRIRGIMLKRGYAFVDFRTDRDASDAVHDMNGR 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
S+ GER+TVEIA G R R ++ S R + +++++VEN
Sbjct: 61 SMRGERMTVEIASGRQRKGSRDQKHRSS--------------SARNDASSNGEYQIVVEN 106
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
LSSR+SW+D KD +R+ EV + DAHK H+++G+V+F + SD+K+A+ K N E+ GRR
Sbjct: 107 LSSRISWKDFKDMIRREDIEVVHVDAHKLHKHQGIVKFRTHSDLKRAIKKFQNREIEGRR 166
Query: 180 IRLIEDKPRGGGRGRSRSSSSRSRS-----KSRSRSRSSKSRSPRSRSKSGSPRKSKSKA 234
+ + E R G R RS S S R+ + RSRS SS S SPR + K+G+P A
Sbjct: 167 LEITET--RSGSRERSGSRDSLDRNPPSKKRYRSRSASSVSLSPRPKRKAGTPTSDSGSA 224
Query: 235 KSVSRSP 241
+ + +P
Sbjct: 225 EKEALNP 231
>gi|196007380|ref|XP_002113556.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583960|gb|EDV24030.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 126/198 (63%), Gaps = 12/198 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T+VY+G L VRERD+EKF + YG++++V LK FGFVEF+D RDA+DAVY+LN K L
Sbjct: 2 TRVYLGRLNSSVRERDVEKFFRDYGKLKEVTLKGTFGFVEFDDSRDAEDAVYDLNNKELC 61
Query: 64 GERVTVEIAKGIDRSQERGR----RGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G+R+ VE A+ +R + RGR G G G P R+D+RL +
Sbjct: 62 GDRIIVEFAR--NRREARGRGDDRYGRSRGGRSSGGGGGGGPAAGYGSAPVRTDYRLYIN 119
Query: 120 NLSSRVSWQDLKDFMRQVGE--VCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
NLSSRVSWQDLKD++R + V YADAHK+ + +VEF+S D++ A+ KLDN E+NG
Sbjct: 120 NLSSRVSWQDLKDYIRNKTDISVSYADAHKQSVGQAIVEFDSKDDLRYAIKKLDNTEING 179
Query: 178 RRIRLIEDKPRGGGRGRS 195
++I + R GG RS
Sbjct: 180 KKITV----SRDGGDSRS 193
>gi|410953846|ref|XP_003983581.1| PREDICTED: serine/arginine-rich splicing factor 6 [Felis catus]
Length = 318
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 113/184 (61%), Gaps = 28/184 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG + G+ L
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNG------------------VPGRRCL- 43
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
++ R G GY S RR G D+ YGPP R++ RLIVENLSSR
Sbjct: 44 HACPGQLRDAGARGLGCGGGGYSS------RRTSGRDK---YGPPVRTEFRLIVENLSSR 94
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 95 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 154
Query: 185 DKPR 188
DKPR
Sbjct: 155 DKPR 158
>gi|449664983|ref|XP_002156792.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 244
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 136/217 (62%), Gaps = 11/217 (5%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYG---RIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
K++IG L R RDLE+F K +G I++V++K G+GFV F+D RDADDA+YELNGK
Sbjct: 5 KLFIGHLSPDARTRDLERFFKDHGFSKTIQEVVVKTGYGFVVFDDRRDADDAIYELNGKE 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
L+G R+ VE AK RS ++ GY R G RYG P +D RL++EN+
Sbjct: 65 LMGARLQVEYAKPSGRS-DKYDGGYRDRERERSRDRGGFS--SRYGRPYNTDFRLVIENV 121
Query: 122 SSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
S+R SWQD+KD+ RQ GEV +A H+ EGVVEF SSSDMK AL KLD +EL G+RI+
Sbjct: 122 STRCSWQDIKDYFRQAGEVTFAKCHREKMGEGVVEFASSSDMKNALRKLDGSELFGKRIK 181
Query: 182 LIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSP 218
LI RG+S S S + R+RS SRSP
Sbjct: 182 LISTY-----RGQSESRSRSRSRSPKKRTRSPASRSP 213
>gi|402586916|gb|EJW80852.1| hypothetical protein WUBG_08240, partial [Wuchereria bancrofti]
Length = 246
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 104/144 (72%), Gaps = 9/144 (6%)
Query: 43 EFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSY-RAPPPRRGWGHD 101
EF+D RDADDAVYELNGK L GERV +E + R R R G+G + R PPPRR +
Sbjct: 1 EFDDPRDADDAVYELNGKELCGERVILEFS----RRGPRSRMGFGGFDRFPPPRR----E 52
Query: 102 RDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSS 161
YGPP ++ +RLIVENLSSR SWQDLKD MR GEV +ADAHK+H NEG+V F +
Sbjct: 53 SRLVYGPPQQTRYRLIVENLSSRCSWQDLKDIMRTAGEVTFADAHKQHPNEGIVCFLTRD 112
Query: 162 DMKKALDKLDNAELNGRRIRLIED 185
D+++ALDKL E+NGR+++LI+D
Sbjct: 113 DLERALDKLQGKEVNGRKLKLIDD 136
>gi|297259798|ref|XP_001084701.2| PREDICTED: hypothetical protein LOC696054 [Macaca mulatta]
Length = 294
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 107/184 (58%), Gaps = 51/184 (27%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGC------------------------- 37
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
G GY S RR G D+ YGPP R+++RLIVENLSSR
Sbjct: 38 -----------------GGGGYSS------RRTSGRDK---YGPPVRTEYRLIVENLSSR 71
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 72 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 131
Query: 185 DKPR 188
DKPR
Sbjct: 132 DKPR 135
>gi|347972231|ref|XP_003436864.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|347972233|ref|XP_003436865.1| AGAP004592-PG [Anopheles gambiae str. PEST]
gi|333469346|gb|EGK97257.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|333469350|gb|EGK97261.1| AGAP004592-PG [Anopheles gambiae str. PEST]
Length = 132
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/130 (64%), Positives = 99/130 (76%), Gaps = 6/130 (4%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD--RYGPPTRSDHRLIV 118
LLGERV VE A+G RG GY R G + RYGPP R+++RL+V
Sbjct: 61 ELLGERVVVEPARG----TARGPSGYRERDRYDRDRRGGRYDKNSSRYGPPLRTEYRLVV 116
Query: 119 ENLSSRVSWQ 128
ENLS+RVSWQ
Sbjct: 117 ENLSTRVSWQ 126
>gi|347972229|ref|XP_003436863.1| AGAP004592-PD [Anopheles gambiae str. PEST]
gi|333469347|gb|EGK97258.1| AGAP004592-PD [Anopheles gambiae str. PEST]
Length = 138
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 98/132 (74%), Gaps = 4/132 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD----DRYGPPTRSDHRL 116
LLGERV VE A+G R R R R + + RYGPP R+++RL
Sbjct: 61 ELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYRL 120
Query: 117 IVENLSSRVSWQ 128
+VENLS+RVSWQ
Sbjct: 121 VVENLSTRVSWQ 132
>gi|347972235|ref|XP_003436866.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|347972237|ref|XP_003436867.1| AGAP004592-PF [Anopheles gambiae str. PEST]
gi|333469345|gb|EGK97256.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|333469349|gb|EGK97260.1| AGAP004592-PF [Anopheles gambiae str. PEST]
Length = 149
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 102/147 (69%), Gaps = 6/147 (4%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVG++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK
Sbjct: 1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD----DRYGPPTRSDHRL 116
LLGERV VE A+G R R R R + + RYGPP R+++RL
Sbjct: 61 ELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYRL 120
Query: 117 IVENLSSRVSWQ--DLKDFMRQVGEVC 141
+VENLS+RVSWQ F+ +C
Sbjct: 121 VVENLSTRVSWQVCTFLKFLHWKVNIC 147
>gi|47224367|emb|CAG09213.1| unnamed protein product [Tetraodon nigroviridis]
Length = 151
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 105/164 (64%), Gaps = 24/164 (14%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +++IG L RE+D+E+F KGYGRIRD+ LK GFGFVEF+D RDA+DAVYEL+GK
Sbjct: 1 MSGCRIFIGRLSPTAREKDVERFFKGYGRIRDIDLKKGFGFVEFDDPRDAEDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG-----------PP 109
L ERVT+E A+ R G + DRYG PP
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRTWTGGRF-------------SDRYGRGSQSGRSRNPPP 107
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEG 153
R+++RLIVENLSSRVSWQDLKDFMRQ GEV +ADAH+ NEG
Sbjct: 108 VRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEG 151
>gi|301763950|ref|XP_002917433.1| PREDICTED: hypothetical protein LOC100470426 [Ailuropoda
melanoleuca]
Length = 306
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 103/184 (55%), Gaps = 40/184 (21%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG G E Y S
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGHGTPERXXRGLGGGGGYSSRRTS--- 59
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
GR YG PP R++ RLIVENLSSR
Sbjct: 60 -----------------GRDKYG--------------------PPVRTEFRLIVENLSSR 82
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 83 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 142
Query: 185 DKPR 188
DKPR
Sbjct: 143 DKPR 146
>gi|221130960|ref|XP_002164119.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Hydra magnipapillata]
Length = 264
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 113/187 (60%), Gaps = 13/187 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
++++G L R RDLE F K G+ R++DV +K G+ FVEFED RDADDAVYEL+ K
Sbjct: 10 NRIFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKLGYAFVEFEDKRDADDAVYELDRKE 69
Query: 62 LLGERVTVEIAKGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+TVE A G R + RG R G Y R+ G P ++ RLIV N
Sbjct: 70 FFGSRITVEHATGTARGGDTRGERDRGGYSV----------RERGRGRPYNTEWRLIVTN 119
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LSSRV W DLKD+ R GEV + A+K EGVVEF S +MK+AL K D +E RRI
Sbjct: 120 LSSRVGWMDLKDYFRSAGEVTFTKANKERVGEGVVEFRSYREMKRALKKFDGSEFFDRRI 179
Query: 181 RLIEDKP 187
+LI+D P
Sbjct: 180 KLIDDSP 186
>gi|221130958|ref|XP_002164143.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Hydra magnipapillata]
Length = 264
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 113/186 (60%), Gaps = 11/186 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
++++G L R RDLE F K G+ R++DV +K G+ FVEFED RDADDAVYEL+ K
Sbjct: 10 NRIFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKLGYAFVEFEDKRDADDAVYELDRKE 69
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
G R+TVE AK R+ R G R GH+ D G P ++ RLIV NL
Sbjct: 70 FFGSRLTVEHAKHGPRADMDKRDG---------DRRKGHENDRGRGRPYNTEWRLIVTNL 120
Query: 122 SSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
SSRV W DLKD+ R GEV + A+K EGVVEF S +MK+AL K D +E RRI+
Sbjct: 121 SSRVGWMDLKDYFRSAGEVTFTKANKERVGEGVVEFRSYREMKRALKKFDGSEFFDRRIK 180
Query: 182 LIEDKP 187
LI+D P
Sbjct: 181 LIDDSP 186
>gi|225709420|gb|ACO10556.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 244
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 122/184 (66%), Gaps = 3/184 (1%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G++VYIG LP VRERD+EKF+K +GRIR+V++K+G+GFVEF+D RDADD V +++GK
Sbjct: 4 GSRVYIGNLPENVRERDVEKFLKDHGRIREVVIKSGYGFVEFDDPRDADDVVNDMDGKDF 63
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
G R+ VE+A+ ++R R R G + P ++++R++VENLS
Sbjct: 64 QGGRIRVEMARDPRDRRDRDRGSDRRGGFDRGRDRGGRRGN---PPGPKTNYRVVVENLS 120
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SR SWQDLKD+ R G++ Y +AH + EG+VEF SS + ALD + EL+GRR+++
Sbjct: 121 SRTSWQDLKDYFRAAGDITYTNAHTPRQGEGIVEFASSKGLDYALDHQNELELDGRRLKV 180
Query: 183 IEDK 186
E+
Sbjct: 181 YEEN 184
>gi|213401865|ref|XP_002171705.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
gi|211999752|gb|EEB05412.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
Length = 375
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 108/185 (58%), Gaps = 19/185 (10%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M T+++IG LP D+E F KGYGRI D L NGFGF+E E+ RDA D V +GK
Sbjct: 1 MSETRLFIGRLPSQAAREDVEDFFKGYGRILDCKLMNGFGFLELENPRDARDIV--NDGK 58
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+GER+ VE A+G R ++ R G Y PR P R+ +RLIVEN
Sbjct: 59 EFMGERIIVEPARGERRRRDTFRDGAAKY----PR-------------PRRTGYRLIVEN 101
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
L+ VSWQDLKD MR+ GE + DAH+ R GVVEF + DMK ALD L+ + G+ I
Sbjct: 102 LAEDVSWQDLKDVMRKAGEPTFTDAHREQRGTGVVEFSTEDDMKHALDTLNGETIKGQAI 161
Query: 181 RLIED 185
L ED
Sbjct: 162 SLRED 166
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 119/191 (62%), Gaps = 5/191 (2%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G++VY+G LP VRERD+EK K YGRIR+V++K+G+GFVEF+D RDADD V +++GK
Sbjct: 4 GSRVYVGNLPENVRERDVEKLFKEYGRIREVVIKSGYGFVEFDDPRDADDVVNDMDGKEF 63
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRY----GPP-TRSDHRLI 117
G RV VE+A+ + R R R D PP R+++R+
Sbjct: 64 QGGRVRVEMARDPRERRGRDRDRGYERRGGGGGGYDRRDTRGDRGRRGNPPGPRTNYRIT 123
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
V+NLSSR SWQDLKD+ R GE+ Y +AH + EGVVEF SS + A+D D EL+G
Sbjct: 124 VQNLSSRTSWQDLKDYFRAAGEITYTNAHTPRQGEGVVEFASSRGLDYAIDHQDELELDG 183
Query: 178 RRIRLIEDKPR 188
RR+++ E+ R
Sbjct: 184 RRLKVFEEHRR 194
>gi|391339441|ref|XP_003744058.1| PREDICTED: uncharacterized protein LOC100905097 [Metaseiulus
occidentalis]
Length = 355
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 113/181 (62%), Gaps = 7/181 (3%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ +V++G LP V RD+E + GRIRDV+ K + FVEF D RDA DA+ ELNG S
Sbjct: 1 MSARVFVGHLPRKVDRRDIEDYFDRIGRIRDVVHKGNYAFVEFADERDARDAISELNGTS 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
GER+ VE+A RS+ + G PRR G R R GPP R+D+++ ++NL
Sbjct: 61 WKGERIIVELANRRRRSRSQSGDRRGRN----PRRKPG--RITR-GPPRRTDYQISIKNL 113
Query: 122 SSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
S+RVSWQDLKD +V +V YADAH + RN G+VEF++ +M + +K + NGR+I
Sbjct: 114 STRVSWQDLKDIFGEVAKVVYADAHNKRRNYGIVEFDTKEEMNRCYEKFNGKSFNGRKIE 173
Query: 182 L 182
+
Sbjct: 174 M 174
>gi|62089298|dbj|BAD93093.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 419
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 84/102 (82%), Gaps = 2/102 (1%)
Query: 88 SYRAPPPRRGWGHDRD--DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA 145
SY P + G+G+ R D+YGPPTR+++RLIVENLSSR SWQDLKD+MRQ GEV YADA
Sbjct: 1 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADA 60
Query: 146 HKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
HK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL+EDKP
Sbjct: 61 HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKP 102
>gi|313227405|emb|CBY22552.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 122/218 (55%), Gaps = 41/218 (18%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G V++GGLP VR RD++ F KGYGRI D+ +K + FVEFED RDA DAV +L+ + L
Sbjct: 5 GFSVWMGGLPERVRSRDIDDFFKGYGRIVDISIKTKYAFVEFEDERDAADAVKDLDDQKL 64
Query: 63 LGERVTVEIAKGIDRS----QERGRRGYGSY-------------RAP----------PPR 95
G RV +E++KG Q GR Y SY R+P P R
Sbjct: 65 NGSRVRLEVSKGCKDKYRDFQRTGRVRYRSYSKSVSPGRRRHRSRSPVGKGRSRSRSPAR 124
Query: 96 RGWGHDRDD---------RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAH 146
G DR + +YG P ++ + V+NLSSR SWQDLKDFMR+ GEV Y DAH
Sbjct: 125 ---GSDRRETFYSKPAYKKYGAPEKTRWTVEVDNLSSRCSWQDLKDFMRKAGEVTYGDAH 181
Query: 147 KRH--RNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
RN GVV +E D K+A+++LD E NGR ++L
Sbjct: 182 GSDIGRNRGVVCYEREDDAKRAIEELDGREFNGRDVKL 219
>gi|291409640|ref|XP_002721124.1| PREDICTED: splicing factor SRp55 homolog [Oryctolagus cuniculus]
Length = 284
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 100/184 (54%), Gaps = 58/184 (31%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GY G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGY------------------------------------G 26
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
+ V++ G R+ R D+YGPP R+++RLIVENLSSR
Sbjct: 27 RLLEVDLKNGSRRTSGR----------------------DKYGPPVRTEYRLIVENLSSR 64
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIE
Sbjct: 65 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE 124
Query: 185 DKPR 188
DKPR
Sbjct: 125 DKPR 128
>gi|194374487|dbj|BAG57139.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 94/130 (72%), Gaps = 12/130 (9%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+VYIG L Y RERD+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVYELNGK L
Sbjct: 2 LRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLC 61
Query: 64 GERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
GERV VE A+G D S GR GYG R+ D+YGPPTR+++RLIVENL
Sbjct: 62 GERVIVEHARGPRRDGSYGSGRSGYGYRRSGR----------DKYGPPTRTEYRLIVENL 111
Query: 122 SSRVSWQDLK 131
SSR SWQDLK
Sbjct: 112 SSRCSWQDLK 121
>gi|221117454|ref|XP_002167286.1| PREDICTED: uncharacterized protein LOC100197032 [Hydra
magnipapillata]
Length = 394
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 117/196 (59%), Gaps = 23/196 (11%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M+G ++YIG LP +RERD++K +G +R++ +K + F+++E R+A+DAVYE++ +
Sbjct: 23 MMGARIYIGKLPGDIRERDIDKAFSKFGHVREIAMKGNYCFLQYEKTREAEDAVYEMHDR 82
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPP--------------PRRGWGHDRDDRY 106
S GER+ VE A R + +G +RAP D R
Sbjct: 83 SFFGERIQVEHA--------RQPKEFG-FRAPSRFGGSRGYGGYSRSSTYSSSRDYSRRR 133
Query: 107 GPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKA 166
PP RSD+RL V NLS+R QDLK M++ G+V ++DAH+R EGVVEF S DM++A
Sbjct: 134 SPPQRSDYRLSVTNLSTRCDAQDLKAVMQKAGDVVFSDAHRRRVGEGVVEFASRKDMERA 193
Query: 167 LDKLDNAELNGRRIRL 182
L KLD E+NG+ I+L
Sbjct: 194 LKKLDGLEINGKPIKL 209
>gi|344279656|ref|XP_003411603.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Loxodonta
africana]
Length = 423
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 73/85 (85%)
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
D+YGPP R++HRLIVENLSSR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDM
Sbjct: 179 DKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDM 238
Query: 164 KKALDKLDNAELNGRRIRLIEDKPR 188
K+ALDKLD E+NGR IRLIEDKPR
Sbjct: 239 KRALDKLDGTEINGRNIRLIEDKPR 263
>gi|326931663|ref|XP_003211946.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Meleagris
gallopavo]
Length = 310
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 73/84 (86%)
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
D+YGPP R++HRLIVENLSSR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDM
Sbjct: 65 DKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDM 124
Query: 164 KKALDKLDNAELNGRRIRLIEDKP 187
K+ALDKLD E+NGR+IRL+EDKP
Sbjct: 125 KRALDKLDGTEINGRKIRLVEDKP 148
>gi|242012605|ref|XP_002427020.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511265|gb|EEB14282.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 403
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 75/83 (90%)
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
DRYGPPTR+++RLIVENLSSRVSWQDLKD+MRQ GEV YADAHK RNEG+VEF SSSD+
Sbjct: 178 DRYGPPTRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKNRRNEGIVEFSSSSDL 237
Query: 164 KKALDKLDNAELNGRRIRLIEDK 186
K A+DKLD ELNGR+IRLIEDK
Sbjct: 238 KAAIDKLDGTELNGRKIRLIEDK 260
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 80/95 (84%), Gaps = 2/95 (2%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVGT+VYIGGLPYGV++RD+E+F KGYGRIRD+++KNG+GFVEF+DYRDADDAVYELNGK
Sbjct: 1 MVGTRVYIGGLPYGVKDRDIERFFKGYGRIRDILIKNGYGFVEFDDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQER--GRRGYGSYRAPP 93
LLGERV+VE A+G R +R R YG + PP
Sbjct: 61 DLLGERVSVERARGTPRGSDRWKDRDRYGRFGPPP 95
>gi|345310699|ref|XP_001520239.2| PREDICTED: hypothetical protein LOC100091342 [Ornithorhynchus
anatinus]
Length = 334
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 74/85 (87%)
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
D+YGPP R+++RLIVENLSSR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDM
Sbjct: 19 DKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDM 78
Query: 164 KKALDKLDNAELNGRRIRLIEDKPR 188
K+ALDKLD E+NGR+IRL+EDKPR
Sbjct: 79 KRALDKLDGTEINGRKIRLVEDKPR 103
>gi|326920602|ref|XP_003206558.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Meleagris
gallopavo]
Length = 233
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 99/147 (67%), Gaps = 7/147 (4%)
Query: 38 GFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G EFED RDADDAVYEL+GK L ERVT+E A+ R + RGR
Sbjct: 7 AVGLQEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGRGRGRYSDRFSSR------ 60
Query: 98 WGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEF 157
D R PP R+++RLIVENLSSRVSWQDLKDFMRQ GEV +ADAH+ NEGVVEF
Sbjct: 61 -RPRSDRRSAPPLRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEF 119
Query: 158 ESSSDMKKALDKLDNAELNGRRIRLIE 184
S SD+K A++KL E+NGR+I+LIE
Sbjct: 120 ASYSDLKNAIEKLSGKEINGRKIKLIE 146
>gi|312088457|ref|XP_003145870.1| Sfrs5 protein [Loa loa]
Length = 370
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 91/128 (71%), Gaps = 9/128 (7%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ +VY+G L Y ERD+E F +GYGRIRD++LKNGFGFVEF+D RDADDAVYELNGK
Sbjct: 4 MSARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKNGFGFVEFDDPRDADDAVYELNGKE 63
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSY-RAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L GERV +E + R R R G+G + R PPPRR + YGPP ++ +RLIVEN
Sbjct: 64 LCGERVILEFS----RRGPRSRMGFGGFDRFPPPRR----ESRLVYGPPQQTRYRLIVEN 115
Query: 121 LSSRVSWQ 128
LSSR SWQ
Sbjct: 116 LSSRCSWQ 123
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 128 QDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
DLKD MR GEV +ADAHK+H NEG+V F + D+++ALDKL E+NGR+++LI+D
Sbjct: 204 MDLKDIMRTAGEVTFADAHKQHPNEGIVCFLTRDDLERALDKLQGKEVNGRKLKLIDD 261
>gi|339246347|ref|XP_003374807.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
gi|316971934|gb|EFV55647.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
Length = 305
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 98/137 (71%), Gaps = 10/137 (7%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M ++VYIG LPY RERD+E F KGYGRIR+++LKNGFGFVEF+D RDADDAVY LNG+
Sbjct: 87 MASSRVYIGRLPYRARERDVEDFFKGYGRIREILLKNGFGFVEFDDPRDADDAVYHLNGR 146
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGY-GSYRAPPPRRGWGHD-----RDDRYGPPTRSDH 114
L GER+ VE+ K + ++ R Y GSY + RG+ + RDD+YGPP+++
Sbjct: 147 ELCGERIIVEMTKRPPKGRDAFRSSYRGSYGS----RGFSPERRRRDRDDKYGPPSQTPW 202
Query: 115 RLIVENLSSRVSWQDLK 131
R IV N+S+RVSWQ L+
Sbjct: 203 RCIVSNVSTRVSWQHLR 219
>gi|38649360|gb|AAH63235.1| Sfrs5a protein [Danio rerio]
Length = 182
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 90/134 (67%), Gaps = 13/134 (9%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RERD+EKF KGYGRIR++ LKNGFGFVEF+DYRDADDAVYELNGK
Sbjct: 1 MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDYRDADDAVYELNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRG------YGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
L ERVT+E A+ G +G YR R G RYGPP R++H
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGRFSPRFGGYRQ--SRSG-----GSRYGPPVRTEH 113
Query: 115 RLIVENLSSRVSWQ 128
R+IVENLSSR+SWQ
Sbjct: 114 RIIVENLSSRISWQ 127
>gi|432102741|gb|ELK30220.1| Serine/arginine-rich splicing factor 6 [Myotis davidii]
Length = 306
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 71/85 (83%)
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
D+YGPP R++ RLIVENLSSR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDM
Sbjct: 61 DKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDM 120
Query: 164 KKALDKLDNAELNGRRIRLIEDKPR 188
K+ALDKLD E+NGR IRLIEDK R
Sbjct: 121 KRALDKLDGTEINGRNIRLIEDKAR 145
>gi|346467797|gb|AEO33743.1| hypothetical protein [Amblyomma maculatum]
Length = 239
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 88/121 (72%), Gaps = 20/121 (16%)
Query: 71 IAKGIDRSQERGRRGYGSYRA-----PPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRV 125
+A+GI RRG YR+ PPRR RYGPPTR++++L VENLSSRV
Sbjct: 1 LARGI-------RRGADYYRSRAASRSPPRR--------RYGPPTRTEYQLTVENLSSRV 45
Query: 126 SWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
SWQDLKD+MRQ GEV YADAH+ RNEGVVEF + SDMK AL+KLDN +L+GRRIRLIE+
Sbjct: 46 SWQDLKDYMRQAGEVTYADAHRLRRNEGVVEFATYSDMKNALEKLDNTDLSGRRIRLIEE 105
Query: 186 K 186
K
Sbjct: 106 K 106
>gi|324513496|gb|ADY45545.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 310
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 120/235 (51%), Gaps = 64/235 (27%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++Y+G + D+E F +GYGRI D++LKNG+ FVEF+D RDA+DAVYEL+GK
Sbjct: 1 MSARLYVGRVSRYASASDIEWFFRGYGRISDIVLKNGYAFVEFDDPRDAEDAVYELSGKE 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSY-RAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L GERV +E + R++ G Y R RR + +YGPP ++ HR++VEN
Sbjct: 61 LCGERVNIEFTRPTWRTR------IGRYDRYLSSRRSF------KYGPPIQTPHRMLVEN 108
Query: 121 LSSRVSWQ---------------------------------------------------D 129
LSS +WQ +
Sbjct: 109 LSSGCAWQIVTLSRVVQSVKPTYVIARSGFWRQALRVLGLVLARKGEGGITNVGASPQGE 168
Query: 130 LKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
LKD MR GEV +ADAHK EGVV F + +++AL+K+ E+NGR+++L +
Sbjct: 169 LKDLMRSAGEVTFADAHKVRVREGVVCFATHEGLERALEKMQGREINGRKLKLTD 223
>gi|225711268|gb|ACO11480.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 197
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 110/186 (59%), Gaps = 7/186 (3%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G +VY+GGLP V ++ + Y DV+LK F FVEF+ RDAD A+ L+G
Sbjct: 16 GCRVYVGGLPSDVTTSEVGEIFAKYRNRFDVVLKTRFAFVEFDHNRDADHALERLDGTLF 75
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
G+R+ VEIA+G + + RG G R P + W +YG P + ++LI+ NLS
Sbjct: 76 RGQRIVVEIARGPKTADKYLFRG-GMDREPT-QATWVQ----KYGAPEITQYKLIIRNLS 129
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
+R+ WQDLKD MR+ G V YA H+ + EG+V FE+ DM +A+D D+ EL GRR+ +
Sbjct: 130 TRIEWQDLKDLMRKAGRVTYAQVHRNNLREGIVCFENKHDMLRAIDIFDDYELCGRRLDI 189
Query: 183 -IEDKP 187
I KP
Sbjct: 190 EICTKP 195
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 150/309 (48%), Gaps = 77/309 (24%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN------GFGFVEFEDYRDADDAV 54
M VY+G LP VRE+++E YG IR++ +K+ F F++F+D RDA +AV
Sbjct: 1 MSDMTVYVGNLPSNVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAV 60
Query: 55 YELNGKSLLGERVTVEIAKGI-----------DRSQERGRRGYGSYRAPPPRRGWGHDRD 103
+G G+R+ VE +G D GR G
Sbjct: 61 RARDGYEFDGKRLRVEFPRGQGPRGPGGRPTRDNGSRFGRNG------------------ 102
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
GPP RS++RLIVE L SWQD+KD ++Q GE+CYA+ H EGVVEFE D+
Sbjct: 103 ---GPPKRSNYRLIVEGLPRSGSWQDIKDHLKQAGEICYANVHN---GEGVVEFERYEDL 156
Query: 164 KKALDKLDNAELNGRR-----IRLIEDKPRGGGRGRSRSSS-SRSRS------------- 204
+ A+ K D+ + + IRL EDK + R+ S SRS+S
Sbjct: 157 EYAIRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSKSPIRGRCSRSSSRS 216
Query: 205 -----------KSRSRSRSSKSRSPRSRSKSGSPRKSKSKAKSVSRSPSPSKTRKRSRSR 253
S+SRSRS SR R RS+SGSP A+ VSRS SP ++R+RS
Sbjct: 217 KSSIRGRRNGSASKSRSRSPVSRQHRDRSESGSP------ARRVSRSRSPISRQRRARSE 270
Query: 254 SDSRARKVS 262
S + AR+ +
Sbjct: 271 SGTPARRAT 279
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 150/309 (48%), Gaps = 77/309 (24%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN------GFGFVEFEDYRDADDAV 54
M VY+G LP VRE+++E YG IR++ +K+ F F++F+D RDA +AV
Sbjct: 1 MSDMTVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAV 60
Query: 55 YELNGKSLLGERVTVEIAKGI-----------DRSQERGRRGYGSYRAPPPRRGWGHDRD 103
+G G+R+ VE +G D GR G
Sbjct: 61 RACDGYEFDGKRLRVEFPRGKGPRGPGGRPTRDNGSRFGRNG------------------ 102
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
GPP RS++RLIVE L SWQD+KD ++Q GE+CYA+ H EGVVEFE ++
Sbjct: 103 ---GPPKRSNYRLIVEGLPRSGSWQDIKDHLKQAGEICYANVHN---GEGVVEFERYENL 156
Query: 164 KKALDKLDNAELNGRR-----IRLIEDKPRGGGRGRSRSSS-SRSRS------------- 204
+ A+ K D+ + + IRL EDK + R+ S SRS+S
Sbjct: 157 EYAIRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSKSPNRGRCSRSSSRS 216
Query: 205 -----------KSRSRSRSSKSRSPRSRSKSGSPRKSKSKAKSVSRSPSPSKTRKRSRSR 253
S+SRSRS SR R RS+SGSP A+ VSRS SP ++R+RS
Sbjct: 217 KSSIRGRRTGSASKSRSRSPVSRQHRDRSESGSP------ARRVSRSRSPISRQRRARSE 270
Query: 254 SDSRARKVS 262
S + AR+ +
Sbjct: 271 SGTPARRAT 279
>gi|342326406|gb|AEL23118.1| 52K active chromatin boundary protein [Cherax quadricarinatus]
Length = 169
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 91/145 (62%), Gaps = 12/145 (8%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
MVGT+VY+GGL Y V ERDL +F YG + D+++ GF FVE +DYRDA DAV +NGK
Sbjct: 34 MVGTRVYVGGLYYRVGERDLMRFFLCYGPLGDLVIMIGFCFVEIDDYRDAYDAVCYMNGK 93
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
LLG R ++E A+ R RAPPP +G P +++RL +EN
Sbjct: 94 ELLGGRCSMEKARAAPRMMWP--------RAPPPI----GSSSSLFGMPALANYRLTIEN 141
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADA 145
LSSRVSWQDLKDFMRQ G+V Y A
Sbjct: 142 LSSRVSWQDLKDFMRQAGKVTYGHA 166
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 148/306 (48%), Gaps = 74/306 (24%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN------GFGFVEFEDYRDADDAV 54
M VY+G LP VRE+++E YG IR++ +K+ F F++F+D RDA +AV
Sbjct: 1 MSDMTVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAV 60
Query: 55 YELNGKSLLGERVTVEIAKGI-----------DRSQERGRRGYGSYRAPPPRRGWGHDRD 103
+G G+R+ VE +G D GR G
Sbjct: 61 RARDGYEFDGKRLRVEFPRGQGPRGPGGRPTRDNGSRFGRNG------------------ 102
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
GPP RS++RLIVE L SWQD+KD ++Q GE+CYA+ H EGVVEFE D+
Sbjct: 103 ---GPPKRSNYRLIVEGLPRSGSWQDIKDHLKQAGEICYANVHN---GEGVVEFERYEDL 156
Query: 164 KKALDKLDNAELNGRR-----IRLIEDKPRGGGRGRSRSSS-SRSRS------------- 204
+ A K D+ + + IRL EDK + R+ S SRS+S
Sbjct: 157 EYAFRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSKSPIRGRSSSRSKSS 216
Query: 205 --------KSRSRSRSSKSRSPRSRSKSGSPRKSKSKAKSVSRSPSPSKTRKRSRSRSDS 256
S+SRSRS SR R RS+SGSP A+ VSRS SP ++ +RS S +
Sbjct: 217 IRGRRTGSASKSRSRSPVSRHHRDRSESGSP------ARRVSRSRSPISRQRPARSESGT 270
Query: 257 RARKVS 262
AR+ +
Sbjct: 271 PARRAT 276
>gi|223649236|gb|ACN11376.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
Length = 266
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 72/83 (86%)
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
D+YGPP R+++RLIVENLSSR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDM
Sbjct: 33 DKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFGSRSDM 92
Query: 164 KKALDKLDNAELNGRRIRLIEDK 186
++ALDKLD ++NGR+IRL+E+K
Sbjct: 93 RRALDKLDGTDINGRKIRLVEEK 115
>gi|338719068|ref|XP_001500385.3| PREDICTED: serine/arginine-rich splicing factor 6 [Equus caballus]
Length = 164
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 68/81 (83%)
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
D+YGPP R++ RLIVENLSSR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDM
Sbjct: 17 DKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDM 76
Query: 164 KKALDKLDNAELNGRRIRLIE 184
K+ALDKLD E+NGR IRLIE
Sbjct: 77 KRALDKLDGTEINGRNIRLIE 97
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 9/174 (5%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G++VY+G LP VRERD+EKF K YGRIR+V++K+G+GFVEF+D RDADD V +++GK
Sbjct: 4 GSRVYVGNLPENVRERDVEKFFKEYGRIREVVIKSGYGFVEFDDPRDADDVVNDMDGKEF 63
Query: 63 LGERVTVEIAK--------GIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPP-TRSD 113
G RV VE+A+ + R R R PP +++
Sbjct: 64 QGGRVRVEMARDPRDRRGRDRGSDRGSDRGSDRGSDRRSSYDRRDSGRGRRGNPPGPKTN 123
Query: 114 HRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKAL 167
+R+ V+NLSSR SWQDLKD+ R G++ Y +AH + EGVVEF SS D L
Sbjct: 124 YRITVQNLSSRTSWQDLKDYFRAAGDITYTNAHTPRQGEGVVEFASSQDWNTPL 177
>gi|19115482|ref|NP_594570.1| mRNA export factor Srp2 [Schizosaccharomyces pombe 972h-]
gi|26399937|sp|P78814.2|SRP2_SCHPO RecName: Full=Pre-mRNA-splicing factor srp2
gi|2749972|gb|AAC39357.1| putative pre-mRNA splicing factor [Schizosaccharomyces pombe]
gi|6013092|emb|CAB57400.1| mRNA export factor Srp2 [Schizosaccharomyces pombe]
Length = 365
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 103/185 (55%), Gaps = 16/185 (8%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M T++++G +P D+ F KGYG+I D L NGFGFVE ED RDA D V + GK
Sbjct: 1 MSETRLFVGRIPPQATREDMMDFFKGYGQILDCKLMNGFGFVEVEDARDARDIVNDFQGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+G R+ VE A+G R +E R S +Y P R+ RLIVEN
Sbjct: 61 EFMGSRIVVEPARGERRRRENFRESAAS----------------KYPRPRRTGFRLIVEN 104
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
LS VSWQDLKD MR+ GE + DAH+ + GVVEF + DM+ AL L+ + G+ +
Sbjct: 105 LSEDVSWQDLKDVMRKAGEPTFTDAHRENPGAGVVEFSTEEDMRNALTSLNGEVIKGQAV 164
Query: 181 RLIED 185
L ED
Sbjct: 165 TLRED 169
>gi|336266018|ref|XP_003347779.1| hypothetical protein SMAC_03877 [Sordaria macrospora k-hell]
gi|380091314|emb|CCC11171.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 24/207 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G R +E G G+ H+R+ + P P R+ HR+ +
Sbjct: 67 FMGERLTVQFARGA-RHREGG-------------PGFTHERNSQ--PRPRRTPHRMQISG 110
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKDF RQ G +V Y++ + EG VEFE+++D++ A++KLDN E G+R
Sbjct: 111 LPNETSWQDLKDFARQSGLDVVYSETTRNQNGEGFVEFENAADLRTAVEKLDNREFKGQR 170
Query: 180 IRLI----EDKPRGGGRGRSRSSSSRS 202
+ + D PR R RSRS R
Sbjct: 171 VTCVANTQPDIPRNDHRARSRSPRGRP 197
>gi|336465804|gb|EGO53969.1| hypothetical protein NEUTE1DRAFT_118022 [Neurospora tetrasperma
FGSC 2508]
gi|350287365|gb|EGZ68612.1| hypothetical protein NEUTE2DRAFT_146011 [Neurospora tetrasperma
FGSC 2509]
Length = 315
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 24/207 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G R +E G G+ H+R+ + P P R+ HR+ +
Sbjct: 67 FMGERLTVQFARGA-RHREGG-------------PGFTHERNSQ--PRPRRTPHRMQISG 110
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKDF RQ G +V Y++ + EG VEFE+++D++ A++KLDN E G+R
Sbjct: 111 LPNETSWQDLKDFARQSGLDVVYSETTRNQNGEGFVEFENAADLRTAVEKLDNREFKGQR 170
Query: 180 IRLI----EDKPRGGGRGRSRSSSSRS 202
+ + D PR R RSRS R
Sbjct: 171 VTCVANTQPDIPRNDHRARSRSPRGRP 197
>gi|443899862|dbj|GAC77190.1| alternative splicing factor SRp55/B52/SRp75 [Pseudozyma antarctica
T-34]
Length = 260
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 137/258 (53%), Gaps = 23/258 (8%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+VY+G LP VR D++ + YGR++DV + FGFVEFE RDA+DAV + +G++
Sbjct: 1 MSTRVYVGKLPPDVRRGDIDDLFRDYGRLQDVRIMGSFGFVEFEHPRDAEDAVKDFDGRN 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR---------- 111
+GER+ V+ AK +R +E GYG+ P RRG R+ PP+R
Sbjct: 61 FMGERIVVQHAKSGERRREPA--GYGA--DPYDRRGGPPGRE----PPSRYGAPPPRREP 112
Query: 112 ----SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKAL 167
R IV NL SWQDLKD R+ G + +AD +EGV+E+++ D ++AL
Sbjct: 113 RIRRGQFRCIVSNLPPNTSWQDLKDIGREHGSISFADVDPSRPDEGVIEYDNRDDYERAL 172
Query: 168 DKLDNAELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSP 227
DK++ EL G ++R+ +P R S R R S R SR PR R S P
Sbjct: 173 DKIEGIELRGYKLRIDPARPARDDRDDRDRSPPRRRDDSPPPRRREDSREPRDREDSREP 232
Query: 228 RKSKSKAKSVSRSPSPSK 245
++ + SRSP P +
Sbjct: 233 APERN-GRYDSRSPLPPR 249
>gi|25012246|gb|AAN71237.1| LD22171p, partial [Drosophila melanogaster]
Length = 187
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 67/74 (90%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VY+GGLPYGVRERDLE+F KGYGR RD+++KNG+GFVEFEDYRDADDAVYELNGK LL
Sbjct: 1 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELL 60
Query: 64 GERVTVEIAKGIDR 77
GERV VE A+G R
Sbjct: 61 GERVVVEPARGTAR 74
>gi|213514036|ref|NP_001133737.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
gi|209155158|gb|ACI33811.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
Length = 261
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 71/82 (86%)
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
D+YGPP R+++RLIVENLSSR SWQDLKDFMRQ GEV YADAHK NEGV+EF S SDM
Sbjct: 30 DKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFGSRSDM 89
Query: 164 KKALDKLDNAELNGRRIRLIED 185
++ALDKLD ++NGR+IRL+E+
Sbjct: 90 RRALDKLDGTDINGRKIRLVEE 111
>gi|402219133|gb|EJT99207.1| hypothetical protein DACRYDRAFT_23817 [Dacryopinax sp. DJM-731 SS1]
Length = 319
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 111/183 (60%), Gaps = 19/183 (10%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M ++YIG +P ++D+EKF +GYGRI+D+ + NGFGFVEFE+ +DA+D V GK
Sbjct: 1 MSSKRIYIGKMPRDAMKQDIEKFFEGYGRIQDIRIMNGFGFVEFENPKDAEDVVANFQGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT-RSDHRLIVE 119
+LLGE + +E+AK + +ERG G + PR P T R +R+++
Sbjct: 61 NLLGEPIIIELAK--ESRRERG----GGFEERGPR------------PFTRRPGYRVLIH 102
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
+S SWQDLKDF R+ G V ++D + + EG++E+ + D++ AL L+N EL G
Sbjct: 103 GVSRDTSWQDLKDFGREAGAVTFSDLDRENPGEGILEYLTPDDLENALRLLNNRELRGVT 162
Query: 180 IRL 182
+R+
Sbjct: 163 VRV 165
>gi|1749534|dbj|BAA13825.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 101/181 (55%), Gaps = 16/181 (8%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++++G +P D+ F KGYG+I D L NGFGFVE ED RDA D V + GK +G
Sbjct: 1 RLFVGRIPPQATREDMMDFFKGYGQILDCKLMNGFGFVEVEDARDARDIVNDFQGKEFMG 60
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
R+ VE A+G R +E R S +Y P R+ RLIVENLS
Sbjct: 61 SRIVVEPARGERRRRENFRESAAS----------------KYPRPRRTGFRLIVENLSED 104
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
VSWQDLKD MR+ GE + DAH+ + GVVEF + DM+ AL L+ + G+ + L E
Sbjct: 105 VSWQDLKDVMRKAGEPTFTDAHRENPGAGVVEFSTEEDMRNALTSLNGEVIKGQAVTLRE 164
Query: 185 D 185
D
Sbjct: 165 D 165
>gi|403418011|emb|CCM04711.1| predicted protein [Fibroporia radiculosa]
Length = 328
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 105/187 (56%), Gaps = 20/187 (10%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G LP R D+ KF GYGRI D + GFGFVEFE RDADDAV + NGK+ +G
Sbjct: 4 RLYLGRLPPDARSEDVSKFFDGYGRIVDCRVMTGFGFVEFESSRDADDAVRDFNGKAFMG 63
Query: 65 ERVTVEIAKGIDRSQERGRRG-YGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
+ VE AK + R RR + RAP RR PP RL+V +S
Sbjct: 64 ANIVVEFAK-----ESRPRREVFEPERAPRARR-----------PPG---FRLVVSGISR 104
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
SWQDLKDF R+ G V YAD + EG++E+ S D ++A+ +LD +L G+ +R+
Sbjct: 105 DTSWQDLKDFGREAGSVSYADIDRDAAGEGILEYLSRDDAERAVKELDGKDLRGQPVRVA 164
Query: 184 EDKPRGG 190
D R G
Sbjct: 165 LDLERSG 171
>gi|313227227|emb|CBY22374.1| unnamed protein product [Oikopleura dioica]
Length = 263
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 109/198 (55%), Gaps = 30/198 (15%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++YIG LP R D+E+F KG+G I+ + LK G+GFV FED RDA++A +L+GK +
Sbjct: 6 AQLYIGYLPNQARMSDVEEFFKGFGHIKSINLKPGYGFVVFEDKRDAEEAARDLDGKRMC 65
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG---------------- 107
GE+V VE+AKG + R+ Y P RD R G
Sbjct: 66 GEKVDVEMAKG---PGNKSRKEYSRSGDRPIV------RDTRSGFNGRRRSRSRDRGFSS 116
Query: 108 ---PPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEV--CYADAHKRHRNEGVVEFESSSD 162
P R D + + NLS+R SWQDLKDF+R V + DAHK V F SSSD
Sbjct: 117 RKKEPYRDDATISITNLSTRCSWQDLKDFIRDNARVEPDFCDAHKYEDRIATVSFRSSSD 176
Query: 163 MKKALDKLDNAELNGRRI 180
M+KA+D++D E++GR+I
Sbjct: 177 MRKAVDRMDGFEIHGRKI 194
>gi|388856974|emb|CCF49394.1| related to pre-mrna splicing factor srp55 [Ustilago hordei]
Length = 259
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 111/203 (54%), Gaps = 35/203 (17%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+VY+G LP VR D+E + YGR+ DV + FGFVEFE +RDA+DAV + +GK+
Sbjct: 1 MSTRVYVGKLPADVRRGDIEDLFRDYGRLYDVRIMGTFGFVEFEHHRDAEDAVKDFDGKN 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG-----PPTR----- 111
+GER+ V+ AK +R R P P G+G D DR G PP+R
Sbjct: 61 FMGERIVVQHAKQSER------------RRPEP-AGYGSDPYDRRGGGGREPPSRYGSSV 107
Query: 112 ------------SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFES 159
R IV NL SWQDLKD R+ G V +AD +EGV+E+++
Sbjct: 108 APPPRREPRLRRGQFRCIVSNLPPNTSWQDLKDIGREHGSVSFADVDAARPDEGVIEYDN 167
Query: 160 SSDMKKALDKLDNAELNGRRIRL 182
D ++ALDK++ EL G ++R+
Sbjct: 168 RDDYERALDKIEGTELRGFKLRI 190
>gi|390597697|gb|EIN07096.1| hypothetical protein PUNSTDRAFT_71302 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 282
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 101/190 (53%), Gaps = 19/190 (10%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M ++Y+G LP R D+ KF GYG I D + GFGFVEFE RDA+DA+ NGK
Sbjct: 1 MAARRLYLGRLPPDTRSEDVSKFFDGYGHIVDCRVMTGFGFVEFESTRDAEDALNHFNGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G + +E AK + R RR P RR PP RLIV
Sbjct: 61 PFNGANIVIEFAK-----ESRPRRDVYEADRPRARR-----------PPG---IRLIVSG 101
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+S SWQDLKDF R+ G V YAD + H EG++E+ + D +A+ +LD +L GR++
Sbjct: 102 VSRDTSWQDLKDFGREAGNVSYADIDRDHPGEGILEYLTREDADRAVRELDGKDLRGRQV 161
Query: 181 RLIEDKPRGG 190
R+ D PR G
Sbjct: 162 RVALDDPRAG 171
>gi|313212059|emb|CBY17785.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 108/181 (59%), Gaps = 6/181 (3%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G V+IGGL R++D+E F YG++ + L++ +GFV+F+D RDA+DA+ +L+G SL
Sbjct: 4 GITVFIGGLSDRARDKDIEDFFDKYGKVTQIRLRDRYGFVDFDDRRDAEDAIKDLDGSSL 63
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
GERV +E+A S+ G R G P R+ L VENLS
Sbjct: 64 CGERVRLELANRSRGSRRSGSRDRGRRGGDRGGDERRGS-----NRPHRTRFTLEVENLS 118
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
SRVSW DLKD MR+ GEV Y DAH+R +N G V F +S D++ A K D ++NGRR++
Sbjct: 119 SRVSWADLKDMMRKAGEVTYTDAHQRMGKNRGEVCFANSEDLRAAYKKFDGEDVNGRRLK 178
Query: 182 L 182
L
Sbjct: 179 L 179
>gi|239790646|dbj|BAH71871.1| ACYPI003349 [Acyrthosiphon pisum]
Length = 160
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 96/131 (73%), Gaps = 5/131 (3%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
GT+V++GGL + VRERDLE+F + GR++D+ +KNG+ FVEF+DYRDADDAVYELNG+ L
Sbjct: 4 GTRVFVGGLSHRVRERDLERFFQKIGRVKDIAMKNGYAFVEFDDYRDADDAVYELNGREL 63
Query: 63 LGERVTVEIAKGIDRSQERGR-----RGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
GERV+VE A+G R + R PRR DR+DRYGPPTR+++RLI
Sbjct: 64 NGERVSVERARGTPRGSDVWRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNYRLI 123
Query: 118 VENLSSRVSWQ 128
VENLSSRVSWQ
Sbjct: 124 VENLSSRVSWQ 134
>gi|324517555|gb|ADY46854.1| Serine/arginine-rich splicing factor 6 [Ascaris suum]
Length = 266
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 79/106 (74%), Gaps = 9/106 (8%)
Query: 81 RGRRG-YGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGE 139
R RRG Y Y PPPRR + RYGPP ++ HRLIVENLSSR SWQDLKD MR GE
Sbjct: 71 RSRRGMYDRY--PPPRR------ESRYGPPQQTRHRLIVENLSSRCSWQDLKDIMRTAGE 122
Query: 140 VCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
V +ADAHK+H NEGVV F+S D+++ALDKL E+NGR+++LI+D
Sbjct: 123 VTFADAHKQHANEGVVCFQSREDLERALDKLQGKEVNGRKLKLIDD 168
>gi|85096852|ref|XP_960334.1| hypothetical protein NCU07069 [Neurospora crassa OR74A]
gi|28921822|gb|EAA31098.1| predicted protein [Neurospora crassa OR74A]
Length = 313
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 116/206 (56%), Gaps = 24/206 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMNGFGFIEYKDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+TV+ A+G R +E G G+ H+R+ + P R+ HR+ + L
Sbjct: 65 FMGERLTVQFARGA-RHREGGP-------------GFTHERNSQPRP-RRTPHRMQISGL 109
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+ SWQDLKDF RQ G +V Y++ + EG VEFE+++D++ A++KLDN E G+R+
Sbjct: 110 PNETSWQDLKDFARQSGLDVVYSETTRNQNGEGFVEFENAADLRTAVEKLDNREFKGQRV 169
Query: 181 RLI----EDKPRGGGRGRSRSSSSRS 202
+ D PR R RSRS R
Sbjct: 170 TCVANTQPDIPRNDHRARSRSPRGRP 195
>gi|403166701|ref|XP_003326577.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166678|gb|EFP82158.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 258
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 101/182 (55%), Gaps = 22/182 (12%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G ++Y+G +P D+EK+ YG + DV + GFGF+E++ RDA+DAV++LNG+
Sbjct: 5 GRRIYVGRIPPDASRTDVEKYFGRYGTLMDVRIMAGFGFLEYDSVRDAEDAVHDLNGRDF 64
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
+GER+ VE AK R ++ G+G PRRG RL+V+ LS
Sbjct: 65 MGERLIVEFAKA-PRGRDIHSGGHG------PRRGG---------------FRLLVKGLS 102
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SWQDLKDF RQ G V AD + EG++EF S D A+ KLD EL G + L
Sbjct: 103 HETSWQDLKDFARQAGNVTRADVDRNMPGEGLIEFASQDDADNAIRKLDGTELKGMVVTL 162
Query: 183 IE 184
IE
Sbjct: 163 IE 164
>gi|76155295|gb|AAX26558.2| SJCHGC09454 protein [Schistosoma japonicum]
Length = 208
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 74/89 (83%)
Query: 99 GHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFE 158
G RD RYGPPTR+++R+IVENLSSRVSWQDLKD MR+ GEV YADAHK +N+G+VEF
Sbjct: 1 GSGRDRRYGPPTRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFA 60
Query: 159 SSSDMKKALDKLDNAELNGRRIRLIEDKP 187
+ +DMK+A++K D EL GRR+R+ ED+P
Sbjct: 61 AYADMKEAIEKFDGYELYGRRLRVYEDRP 89
>gi|328849877|gb|EGF99050.1| hypothetical protein MELLADRAFT_79554 [Melampsora larici-populina
98AG31]
Length = 259
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 107/197 (54%), Gaps = 13/197 (6%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G ++YIG +P D+EK+ YG + DV + GFGF+E++ RDA+DAV++LNG+
Sbjct: 5 GRRLYIGRIPQEATRTDIEKYFGRYGTLLDVRIMAGFGFLEYDQVRDAEDAVHDLNGREF 64
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
+G+R+ VE AK +E G G RS RLIV+ +S
Sbjct: 65 MGDRLIVEFAKAPRGGREMYGGGGGGSYGGGGGP-------------RRSGFRLIVKGIS 111
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SWQDLKDF RQ G V AD + EG++E+ S D AL KLD +L G + L
Sbjct: 112 HETSWQDLKDFARQAGNVIRADVDRNMPGEGLIEYSSQDDADNALRKLDGTDLKGMVVTL 171
Query: 183 IEDKPRGGGRGRSRSSS 199
ED+P GG R RSRS S
Sbjct: 172 FEDRPGGGRRDRSRSPS 188
>gi|392567011|gb|EIW60186.1| hypothetical protein TRAVEDRAFT_27854 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 107/187 (57%), Gaps = 20/187 (10%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G LP VR ++ KF GYGRI D + GFGFVEFE RDA+DA+ NGK+ +G
Sbjct: 4 RLYLGRLPPDVRSEEVSKFFDGYGRIVDCRVMTGFGFVEFESSRDAEDAMQNFNGKNFMG 63
Query: 65 ERVTVEIAKGIDRSQERGRRG-YGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
+ VE AK + R RR Y + RA RR PP R+IV +S
Sbjct: 64 SNIVVEFAK-----ETRPRRDPYDADRAVRARR-----------PPG---FRVIVSGISR 104
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
SWQDLKDF R+ G V YAD + + EG++E+ S D ++A+ LD +L G+ +R+
Sbjct: 105 DTSWQDLKDFGREAGSVSYADIDRDNPGEGILEYLSREDSERAVKDLDGRDLRGQSVRVA 164
Query: 184 EDKPRGG 190
D+ RGG
Sbjct: 165 MDRERGG 171
>gi|170284807|gb|AAI61135.1| Unknown (protein for IMAGE:7797355) [Xenopus (Silurana) tropicalis]
Length = 428
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 65/74 (87%)
Query: 114 HRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
+RL VENLSSR SWQDLKDFMRQ GEV YADAH+R +NEGV+EF S SDM++AL+KLD +
Sbjct: 2 YRLRVENLSSRCSWQDLKDFMRQAGEVTYADAHQRRQNEGVIEFRSYSDMRRALEKLDGS 61
Query: 174 ELNGRRIRLIEDKP 187
E+NGR+I+L+ED+
Sbjct: 62 EINGRKIQLVEDRA 75
>gi|343426008|emb|CBQ69540.1| related to pre-mrna splicing factor srp55 [Sporisorium reilianum
SRZ2]
Length = 248
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 15/192 (7%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ T+VYIG LP VR D+E + YGR+ DV + FGFVEFE RDA+DAV + +GK+
Sbjct: 1 MSTRVYIGKLPADVRRGDIEDLFRDYGRLYDVRIMGSFGFVEFEHPRDAEDAVKDFDGKN 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPP-PRRGWGHDR-DDRYGPPTRS------- 112
+GER+ V+ AK S ER R Y + P RRG D RYG P
Sbjct: 61 FMGERILVQHAK----SGERRRAEPAGYASDPYDRRGGARDAPSSRYGAPPPPRREPRLR 116
Query: 113 --DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKL 170
R ++ NL SWQDLKD R+ G + +AD + +EG +E+++ D ++ALDK+
Sbjct: 117 RGQFRCVISNLPPNTSWQDLKDIGREHGSISFADVDPNNPDEGFIEYDNRDDYERALDKI 176
Query: 171 DNAELNGRRIRL 182
+ EL G ++R+
Sbjct: 177 EGIELRGNKLRI 188
>gi|290562259|gb|ADD38526.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 106/178 (59%), Gaps = 6/178 (3%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G +VY+GGLP D+ Y D+ LK F F+EF+ +RDAD AV L+G +
Sbjct: 16 GCRVYVGGLPTDTSRSDIRDIFSKYRDRFDMKLKTRFAFIEFDYHRDADHAVDNLDGLTF 75
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
G R++VE+A+G R+ ++ R G P + W RYG P + ++++V+NLS
Sbjct: 76 RGRRISVEVARG-PRTADKYRFK-GGLNHEPVQATWV----KRYGTPEITKYKILVKNLS 129
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+R+ WQDLKD M++ G V YA AHK + +EG+V F + M KA+D ++ +L GR++
Sbjct: 130 TRIEWQDLKDLMKKAGTVTYALAHKNNMHEGMVCFSNEEGMLKAIDIFNDYDLCGRKL 187
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta CCMP2712]
Length = 258
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 29/189 (15%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+VY+G L VRERDL+ +G+IRD+ LK GF FVE++ DA+ AV +++G +L
Sbjct: 5 CRVYVGHLSSRVRERDLDDEFSRFGKIRDISLKQGFAFVEYDHSEDAEYAVRKMDGVNLE 64
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
G R+ VE AK P+R GP S +R+ ENLS
Sbjct: 65 GMRILVEFAK------------------ETPKR----------GPRGGSGYRIYAENLSQ 96
Query: 124 RVSWQDLKDFMRQVGEVCYADAH-KRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SWQDLKDF R+ G+V Y D +R GV+E+ + DM+ AL KLD EL+ ++RL
Sbjct: 97 NTSWQDLKDFARKAGKVIYTDVFSERGEKLGVIEYATREDMEDALYKLDGTELHRSKVRL 156
Query: 183 IEDKPRGGG 191
+++ RGGG
Sbjct: 157 VKESERGGG 165
>gi|393216709|gb|EJD02199.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 270
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 129/249 (51%), Gaps = 31/249 (12%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++Y+G LP R ++ K+ G+G + DV + GFGFVEFE RDA+DA+ ++ GK
Sbjct: 1 MARRLYLGKLPPDTRTDEVTKYFDGFGPLVDVRVMTGFGFVEFESSRDAEDALRDIRGKP 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR--SDHRLIVE 119
LG + VE AK + RGRR +D +DR P R + R+ V+
Sbjct: 61 FLGSNIVVEFAK-----ENRGRR---------------NDYEDRSFAPRRRPAGIRISVD 100
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
N+S SWQDLKDF R+ G V +AD + G++E+ S D ++A+ +LD EL G+
Sbjct: 101 NISKDTSWQDLKDFGREAGSVSFADIDREVPGRGILEYASRDDAEQAVKELDGKELRGQP 160
Query: 180 IRLIEDKPRGGGRGRSRSSS-----SRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKA 234
+ + D+ RGG R R R R+ +R PR R +SGSP + +
Sbjct: 161 VHVTMDEDRGGPDNFRRDDGYRGDRYRDRGDRYDRNDRFSARPPR-RGRSGSPPPRRDEG 219
Query: 235 KSVSRSPSP 243
+RSP P
Sbjct: 220 ---ARSPPP 225
>gi|55153889|gb|AAH85267.1| Sfrs5 protein [Mus musculus]
gi|194382214|dbj|BAG58862.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPR------NDRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQ 128
LSSRVSWQ
Sbjct: 115 LSSRVSWQ 122
>gi|367029667|ref|XP_003664117.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
gi|347011387|gb|AEO58872.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
Length = 296
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 29/202 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G R +E G HDR+ P P R+ HR+ +
Sbjct: 67 FMGERLTVQFARG-SRHREHG-----------------HDRNS--APRPRRTPHRMQITG 106
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKDF RQ G +V Y++ ++ EG VEFE+++D++ A++KLD E R
Sbjct: 107 LPNDTSWQDLKDFARQSGADVVYSETNRNGGTEGFVEFETAADLRTAVEKLDGREFKNVR 166
Query: 180 IRLI----EDKPRGGGRGRSRS 197
+ I D PR G RGRSRS
Sbjct: 167 VTCIAATQPDYPR-GDRGRSRS 187
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVIL----KNGF--GFVEFEDYRDADDAVYELN 58
++ I GLP +DL+ F + G DV+ +NG GFVEFE D AV +L+
Sbjct: 101 RMQITGLPNDTSWQDLKDFARQSGA--DVVYSETNRNGGTEGFVEFETAADLRTAVEKLD 158
Query: 59 GKSLLGERVTVEIAKGIDRSQ-ERGR-RGYGSYRAPPPRRGWGHDRDDRYGPP 109
G+ RVT A D + +RGR R Y PPP D DR GPP
Sbjct: 159 GREFKNVRVTCIAATQPDYPRGDRGRSRSPRRYLPPPPV-----DDYDRRGPP 206
>gi|149025035|gb|EDL81402.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Rattus
norvegicus]
gi|149025038|gb|EDL81405.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Rattus
norvegicus]
Length = 138
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 87/130 (66%), Gaps = 6/130 (4%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPR------NDRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQDL 130
LSSRVSWQ +
Sbjct: 115 LSSRVSWQPI 124
>gi|313227858|emb|CBY23007.1| unnamed protein product [Oikopleura dioica]
Length = 336
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 109/179 (60%), Gaps = 6/179 (3%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
KV+IG L RD+E + +GRI+++ LKNGFGFVEF+D RDA+DA++E+NG+ L G
Sbjct: 3 KVFIGNLTDRAEGRDVEDAFRKFGRIKEISLKNGFGFVEFDDVRDAEDAIHEMNGERLCG 62
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
+R+TVE+AK G R R+ W R R P R+ + ++V+NLSSR
Sbjct: 63 DRITVELAK----GGGGGGRDRSRSRSRGRSSHWDSRRSGRE-RPHRTPYAVMVDNLSSR 117
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRN-EGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
+W +LKD R+ GEV Y DAH R + G V F + + + LD+ + ++NGR I++
Sbjct: 118 CTWAELKDIFRKFGEVTYTDAHYRSGDGRGEVCFATREEQDRCLDEAEGMDINGRSIKV 176
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKAL 167
P R++ L V+NLSSR W +LKD MR+ GEV Y DAH R R G F + ++ +A
Sbjct: 217 PHRTEFTLGVDNLSSRCDWAELKDLMRKAGEVTYVDAHTRSGRGRGEACFATRDELYRAF 276
Query: 168 DKLDNAELNGRRIRL 182
+ L ++ R ++L
Sbjct: 277 EDLQGMKVYDRAVKL 291
>gi|194373907|dbj|BAG62266.1| unnamed protein product [Homo sapiens]
Length = 138
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPR------NDRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQ 128
LSSRVSWQ
Sbjct: 115 LSSRVSWQ 122
>gi|2460180|gb|AAB71864.1| RNA binding protein [Rattus norvegicus]
Length = 124
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTMEHARARSRGGRGRGRYSDRFSSRRPR------NDRRNAPPVRTENRLIVEN 114
Query: 121 LSSRVSWQ 128
LSSRVSWQ
Sbjct: 115 LSSRVSWQ 122
>gi|2435501|gb|AAC39543.1| HRS [Homo sapiens]
Length = 189
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFV D RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFV---DPRDADDAVYELDGK 57
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R R + + PR D R PP R+++RLIV
Sbjct: 58 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPR------NDRRNAPPVRTENRLIVGE 111
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+ + F + NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 112 FILKSQLAGSQRFHETSWGSNVCGCTRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 171
Query: 181 RLIE 184
+LIE
Sbjct: 172 KLIE 175
>gi|66911687|gb|AAH97003.1| Sfrs5b protein [Danio rerio]
Length = 164
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 89/128 (69%), Gaps = 4/128 (3%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +++IG L RE+D+E+F KGYGRIRD+ LK GFGFVEF+D RDA+DAVYEL+GK
Sbjct: 1 MSGCRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A R + RG RG G P R G G R PP R+++RLIVEN
Sbjct: 61 ELCNERVTIEHA----RVRLRGGRGRGGGGRFPARYGRGSQDSRRNPPPMRTENRLIVEN 116
Query: 121 LSSRVSWQ 128
LSSRVSWQ
Sbjct: 117 LSSRVSWQ 124
>gi|299753075|ref|XP_001833047.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
gi|298410132|gb|EAU88736.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
Length = 279
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 103/186 (55%), Gaps = 23/186 (12%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G LP R D+ KF +GYGRI D + GFGFVEFE +DA+DAV++ NGK +G
Sbjct: 4 RLYLGRLPPDARSDDVSKFFEGYGRIIDCRVMTGFGFVEFESSKDAEDAVHQFNGKPFMG 63
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
+ VE AK + R RR AP RR PP RLIV +S
Sbjct: 64 TAIVVEFAK-----ESRPRREV----APRARR-----------PPG---VRLIVSGISRD 100
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDF R+V V +AD + +GV+E+ S D +A+ LD EL G+ +R++
Sbjct: 101 TSWQDLKDFGREVASVSFADIDRDVPGQGVLEYLSREDADRAVKDLDGRELRGKLVRVVL 160
Query: 185 DKPRGG 190
D RG
Sbjct: 161 DDHRGA 166
>gi|170087376|ref|XP_001874911.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650111|gb|EDR14352.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 297
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 102/188 (54%), Gaps = 16/188 (8%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G LP R D+ KF GYGRI D + GFGFVEFE+ +DA+DAV+ NGK +G
Sbjct: 4 RLYLGRLPTDARSDDVSKFFDGYGRIIDCRVMTGFGFVEFENAKDAEDAVHNFNGKPFMG 63
Query: 65 ERVTVEIAKG--IDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
+ VE AK R RG G + AP RR PP RLIV +S
Sbjct: 64 VNIVVEFAKESRPRREVYDNDRGGGGHGAPRSRR-----------PPG---IRLIVSGVS 109
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SWQDLKDF R G V +AD + +GV+E+ S D +A+ +LD +L GR +R+
Sbjct: 110 RDTSWQDLKDFGRDAGSVSFADIDRDVPGQGVLEYLSREDADRAVKELDGKDLRGRPVRV 169
Query: 183 IEDKPRGG 190
D R G
Sbjct: 170 ALDDSRSG 177
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 101/176 (57%), Gaps = 7/176 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVYELNGK 60
++IG LP VRE++L+ YGRI V +K+G FGFV+F D RDADDAV +G
Sbjct: 9 IFIGNLPGDVREKELDSLFSKYGRINKVDVKSGRGGAAFGFVQFSDSRDADDAVRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G+R+ VE+ +G GR Y RR G+ R +GPP RS++R I+E
Sbjct: 69 DFDGKRIRVELTRGSGPRGPGGRPVRDGYDRGYDRRDDGYGRRQSHGPPRRSENRAIIEG 128
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
L SWQD+KD ++ G++CYAD + +G+VEFE DMK A+ K D+ +
Sbjct: 129 LPPTGSWQDIKDHLKSAGDICYADVGR--NGDGIVEFEKHEDMKYAIKKFDDTKFT 182
>gi|452989025|gb|EME88780.1| hypothetical protein MYCFIDRAFT_209897, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 209
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 110/206 (53%), Gaps = 30/206 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 20 TRLYLGNLPRNATKADVENHFNTHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSE 79
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+ V+ A+G R PR G+ H R P P R+ HR+ +
Sbjct: 80 FMGERLVVQFARGSTR----------------PREGFEHQ--PRMAPRPRRTIHRMTITG 121
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRH----RNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKDF RQ G +V Y++ ++ +G VE+E+++D+ A++KLDN+E
Sbjct: 122 LPFETSWQDLKDFARQSGLDVVYSEVNRERDPSGTGKGFVEYETAADLASAVEKLDNSEF 181
Query: 176 NGRRIRLIEDK----PRGGGRGRSRS 197
G +R I D PR R RSRS
Sbjct: 182 KGSTVRCISDPQTDIPRPRERFRSRS 207
>gi|410976794|ref|XP_003994798.1| PREDICTED: serine/arginine-rich splicing factor 9 [Felis catus]
Length = 340
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 97/176 (55%), Gaps = 27/176 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 135 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 194
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
R+ VE R YGS R GW R R GPPTR SD R++V
Sbjct: 195 DYGQCRLRVEFP-----------RTYGS------RGGW--PRGGRNGPPTRRSDFRVLVS 235
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 236 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 289
>gi|225712350|gb|ACO12021.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290463073|gb|ADD24584.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 105/178 (58%), Gaps = 6/178 (3%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G +VY+GGLP + Y D+ LK F F+EF+ +RDAD AV L+G +
Sbjct: 16 GCRVYVGGLPTDTSRSGIRDIFSKYRDRFDMKLKTRFAFIEFDYHRDADHAVDNLDGLTF 75
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
G R++VE+A+G R+ ++ R G P + W RYG P + ++++V+NLS
Sbjct: 76 RGRRISVEVARG-PRTADKYRFK-GGLNHEPVQATWV----KRYGTPEITKYKILVKNLS 129
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+R+ WQDLKD M++ G V YA AHK + +EG+V F + M KA+D ++ +L GR++
Sbjct: 130 TRIEWQDLKDLMKKAGTVTYALAHKNNMHEGMVCFSNEEGMLKAIDIFNDYDLCGRKL 187
>gi|452839557|gb|EME41496.1| hypothetical protein DOTSEDRAFT_73793 [Dothistroma septosporum
NZE10]
Length = 327
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 113/215 (52%), Gaps = 35/215 (16%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 9 TRLYLGNLPRNATKADVENHFNTHGTGEIMEIKLMNGFGFIEYKDAMDARDVVPAFHGSE 68
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+ V+ A+G +R PR G+ H R P P R+ HR+ +
Sbjct: 69 FMGERLVVQFARGSNR----------------PREGFEH--QPRMAPRPRRTVHRMTITG 110
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRH----RNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKDF RQ G +V Y++ ++ +G VE+E+++D+ A++KLDN+E
Sbjct: 111 LPFETSWQDLKDFARQSGLDVVYSEVNRERDPSGTGKGYVEYETAADLATAVEKLDNSEF 170
Query: 176 NGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRS 210
G +R I D ++ R R + RSRS
Sbjct: 171 KGSNVRCISD---------PQTEIPRPRERYRSRS 196
>gi|389748594|gb|EIM89771.1| hypothetical protein STEHIDRAFT_128672 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 116/225 (51%), Gaps = 19/225 (8%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G LP R D+ KF +GYG+I D + GFGFVEFE RDA+DA+ NGK +G
Sbjct: 4 RLYLGRLPTDARTDDVSKFFEGYGKIVDCRVMTGFGFVEFESSRDAEDALNHFNGKPFMG 63
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
+ VE AK + R RR RAP RR PP R+IV +S
Sbjct: 64 TNLVVEFAK-----ESRPRRDPYDDRAPRARR-----------PPG---IRIIVSGISRD 104
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
SWQDLKDF R+ G V +AD + +GV+E+ + D ++A+ LD +L G+ +R+
Sbjct: 105 TSWQDLKDFGREAGSVSFADIERDVPGQGVLEYLAREDAERAVKDLDGKDLRGQPVRVAL 164
Query: 185 DKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRK 229
+ RG R R + S + S R RS+S PR+
Sbjct: 165 SEDRGADSYSRRDDRYERRDRYERPSYRDERPSYRGRSRSPPPRR 209
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 129/257 (50%), Gaps = 38/257 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELN 58
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +
Sbjct: 7 CTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRD 66
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G + G R+ VE+A G GR Y P R + R R G RS++R++V
Sbjct: 67 GYNFDGYRLRVELAHG-------GRGQSYQYERP---RSYSSGR--RGGVSRRSEYRVLV 114
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAELNG 177
+ L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD E
Sbjct: 115 DGLPSSASWQDLKDHMRRAGDVCFSDVYREAGAIVGIVDYTNYDDMKYAIRKLDGTEF-- 172
Query: 178 RRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKAKSV 237
R++ SRS + R S+SRS +SV
Sbjct: 173 ------------------RNAFSRSYIRVREYDARSRSRSRSLSYSRSRSCSRSESPRSV 214
Query: 238 SRSPSPSKTRKRSRSRS 254
SRSP P R SRSRS
Sbjct: 215 SRSPLPVDERSLSRSRS 231
>gi|355718943|gb|AES06437.1| splicing factor, arginine/serine-rich 9 [Mustela putorius furo]
Length = 220
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 98/177 (55%), Gaps = 27/177 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
R+ VE R YGS R GW R R GPPTR SD R++V
Sbjct: 75 YDYGQCRLRVEFP-----------RTYGS------RGGW--PRGGRNGPPTRRSDFRVLV 115
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 116 SGLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 170
>gi|57105666|ref|XP_534706.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Canis
lupus familiaris]
Length = 221
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 98/177 (55%), Gaps = 27/177 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
R+ VE R YGS R GW R R GPPTR SD R++V
Sbjct: 75 YDYGQCRLRVEFP-----------RTYGS------RGGW--PRGGRNGPPTRRSDFRVLV 115
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 116 SGLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 170
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 143/280 (51%), Gaps = 47/280 (16%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNG 59
+V++G LP V++RDLE YGRI + +K F FVEF+D RDA DAV+ +G
Sbjct: 7 CRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVPFAFVEFDDPRDARDAVHGRDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
G R+ VE+ +G+ GR YG P PR R+GPP R S +R+++
Sbjct: 67 YDFDGCRIRVELTRGVGPRGPGGRPLYG----PDPR-------SPRHGPPPRRSGYRVVI 115
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
L SWQDLKD MR GE+CYAD + GVVE+ + DMK AL KLD+ +
Sbjct: 116 SGLPDTGSWQDLKDHMRDAGEICYADVFRD--GTGVVEYTNYEDMKYALRKLDDTKFKSH 173
Query: 179 R-----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSP--------------R 219
IR+ E R RSRS + R ++RSS SP R
Sbjct: 174 EGEVTYIRVREANINSPNRSRSRSYTPR-------KTRSSPKYSPIRSVSRSRSRSSRSR 226
Query: 220 SRSKSGSPRKSKSKAKSVSRSPSPSKTRKRS--RSRSDSR 257
S S + R+S S S S S SPS+TR ++ RSRS+SR
Sbjct: 227 SHSHASFVRRSVSPVNS-SHSRSPSRTRSKTCPRSRSESR 265
>gi|242782227|ref|XP_002479958.1| electron transfer flavoprotein-ubiquinone oxidoreductase
[Talaromyces stipitatus ATCC 10500]
gi|218720105|gb|EED19524.1| electron transfer flavoprotein-ubiquinone oxidoreductase
[Talaromyces stipitatus ATCC 10500]
Length = 1100
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 21/186 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E++ G G+I ++ L NGFGF+E+ED DA D V +G
Sbjct: 802 TRLYLGNLPRNVTKKDIEEYFGSHGTGKITEIKLMNGFGFIEYEDAMDARDVVPAFHGSD 861
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
GER+TV+ A RG R ++ P D P P R+ R+ V
Sbjct: 862 FKGERLTVQFA--------RGPRHKETFNGP---------SDRPAAPRPRRTVFRMQVSG 904
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKDF RQ G +V Y++ + G VEFES +D+K A++KLD EL G +
Sbjct: 905 LPTETSWQDLKDFARQSGLDVVYSETTRERDGRGFVEFESHADLKTAVEKLDGRELKGSQ 964
Query: 180 IRLIED 185
+ + D
Sbjct: 965 VTCVAD 970
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 103/179 (57%), Gaps = 21/179 (11%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYEL 57
V +VY+G LP VRE+D+E YG IR V LKN F FVEFED RDA+D+V+
Sbjct: 7 VDCRVYVGNLPPDVREKDVEDLFYKYGSIRHVNLKNRRGPPFAFVEFEDRRDAEDSVHGR 66
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRL 116
NG + G ++ VE +G SQ R G S+RA R GPP+R +D R+
Sbjct: 67 NGYNFDGYKLRVEHPRGNGPSQ-RPAYGMSSFRA-------------RGGPPSRRTDFRV 112
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
+V L SWQDLKD MR+ G+VCYAD ++ GVVEF + DM+ A+ LD+ +
Sbjct: 113 MVSGLPPTGSWQDLKDHMREAGDVCYADVYRD--GTGVVEFVNRDDMQFAVKHLDDTKF 169
>gi|408390763|gb|EKJ70150.1| hypothetical protein FPSE_09676 [Fusarium pseudograminearum CS3096]
Length = 312
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 103/185 (55%), Gaps = 19/185 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I +V L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNATKTDVEAHFATHGTGEITEVKLMNGFGFIEYKDPMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+TV+ A+G R +E G G AP PR R+ HR+ + L
Sbjct: 67 FMGERLTVQFARG-SRHREGGNFGNHERTAPRPR---------------RTPHRMQITGL 110
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+ SWQDLKDF RQ +V Y++ + G VEFE+++D++ A++KLD E G+R+
Sbjct: 111 PNDTSWQDLKDFARQSSLDVVYSETGRDSNGRGFVEFETAADLRTAVEKLDGREFKGQRV 170
Query: 181 RLIED 185
+ + D
Sbjct: 171 QCVAD 175
>gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus]
Length = 222
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 97/177 (54%), Gaps = 27/177 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRERDLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 16 RIYVGNLPSDVRERDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 75
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
R+ VE R YG R GW R R GPPTR SD R++V
Sbjct: 76 YDYGQCRLRVEFP-----------RTYGG------RGGW--PRGARNGPPTRRSDFRVLV 116
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 117 SGLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 171
>gi|301790878|ref|XP_002930446.1| PREDICTED: splicing factor, arginine/serine-rich 9-like [Ailuropoda
melanoleuca]
Length = 253
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 96/176 (54%), Gaps = 27/176 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 48 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 107
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
R+ VE R YG R GW R R GPPTR SD R++V
Sbjct: 108 DYGQCRLRVEFP-----------RTYGG------RAGW--PRGGRNGPPTRRSDFRVLVS 148
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 149 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 202
>gi|57164147|ref|NP_001009255.1| serine/arginine-rich splicing factor 9 [Rattus norvegicus]
gi|92058728|sp|Q5PPI1.1|SRSF9_RAT RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|56388745|gb|AAH87684.1| Splicing factor, arginine/serine rich 9 [Rattus norvegicus]
gi|149063569|gb|EDM13892.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Rattus
norvegicus]
Length = 221
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 97/177 (54%), Gaps = 27/177 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
R+ VE R YG R GW R R GPPTR SD R++V
Sbjct: 75 YDYGQCRLRVEFP-----------RAYGG------RGGW--PRASRNGPPTRRSDFRVLV 115
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 116 SGLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 170
>gi|281340832|gb|EFB16416.1| hypothetical protein PANDA_020890 [Ailuropoda melanoleuca]
Length = 215
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 97/177 (54%), Gaps = 27/177 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 9 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 68
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
R+ VE R YG R GW R R GPPTR SD R++V
Sbjct: 69 YDYGQCRLRVEFP-----------RTYGG------RAGW--PRGGRNGPPTRRSDFRVLV 109
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 110 SGLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 164
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 8 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 67
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE +G RG R S R G DR++R P RS R++V
Sbjct: 68 YDYDGYRLRVEFPRGGGPGSYRGSRQGNS-----DRNSRGGDRNNRGPPARRSQFRVMVT 122
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 123 GLPSSGSWQDLKDHMREAGDVCFADVYK--DGTGVVEFLRHEDMKYAIKKLDDSRF 176
>gi|409082207|gb|EKM82565.1| hypothetical protein AGABI1DRAFT_111169 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200034|gb|EKV49958.1| hypothetical protein AGABI2DRAFT_190388 [Agaricus bisporus var.
bisporus H97]
Length = 289
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 102/188 (54%), Gaps = 20/188 (10%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G LP R D++KF G+GRI D + GFGFVEFE +DA++AV+ NGKS +G
Sbjct: 4 RLYLGRLPPDARSEDVQKFFDGFGRIIDCRVMTGFGFVEFESPKDAEEAVHTFNGKSFMG 63
Query: 65 ERVTVEIAKG--IDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
+ VE AK R RG+G P RR PP RL+V +S
Sbjct: 64 ANIVVEFAKESRPRREPYENERGHG----PRARR-----------PPG---IRLVVTGVS 105
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SWQDLKDF R G V +AD + +GV+E+ + D +A+ +LD EL GR +R+
Sbjct: 106 RDTSWQDLKDFGRDAGSVSFADIDRESPGQGVLEYLNREDADRAVRELDGKELRGRPVRV 165
Query: 183 IEDKPRGG 190
D GG
Sbjct: 166 ALDDSGGG 173
>gi|298710995|emb|CBJ32302.1| arginine/serine-rich splicing factor 6 [Ectocarpus siliculosus]
Length = 235
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 101/184 (54%), Gaps = 26/184 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++YIG L R+RDL++ YGRI + ++ GF F+EFED RDA+DAV E++G+
Sbjct: 3 NRIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFD 62
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
G R+ V+ +G +R P+ R++HR+ VE L S
Sbjct: 63 GARIVVQPGRG--------------HRPNGPKFA-----------TRRTEHRITVEGLDS 97
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SWQDLKDF RQ G+V Y+D R R GVVE+ S DMK A+ LD+ L G+ IR+
Sbjct: 98 HTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKAAIRTLDDTRLGGKYIRV 157
Query: 183 IEDK 186
E+
Sbjct: 158 REEN 161
>gi|449296860|gb|EMC92879.1| hypothetical protein BAUCODRAFT_114866 [Baudoinia compniacensis
UAMH 10762]
Length = 326
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 32/213 (15%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 14 TRLYLGNLPRNATKADVENHFNTHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSE 73
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+ V+ A+G +R ++ G++ R P P R+ HR+ +
Sbjct: 74 FMGERLVVQFARGGNRPRD------------------GYNDAPRMAPRPRRTVHRMTITG 115
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRN-----EGVVEFESSSDMKKALDKLDNAE 174
L SWQDLKDF RQ G +V Y++ R R+ +G VE+E++ D+ A++KLDN +
Sbjct: 116 LPFETSWQDLKDFARQSGLDVVYSEV-ARERDASGGGKGFVEYETAQDLASAVEKLDNHD 174
Query: 175 LNGRRIRLIEDK----PRGGGRGRSRSSSSRSR 203
G +R I D PR R RSRS R R
Sbjct: 175 FKGSTVRCISDPQADIPRPRERFRSRSPGYRGR 207
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 127/240 (52%), Gaps = 32/240 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEF+D RDA+DAV+ +G
Sbjct: 9 CRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDG 68
Query: 60 KSLLGERVTVEIAKGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDDR-YGPPTR-SDHRL 116
G R+ VE +G S RG RG G R G G + R GPP R S +R+
Sbjct: 69 YDYDGYRLRVEFPRGGGPSNNFRGGRGAGD----SGRGGRGEMSNSRGRGPPARRSQYRV 124
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
+V L SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 125 LVTGLPPSGSWQDLKDHMREAGDVCFADVYK--DGTGVVEFLRYEDMKYAVKKLDDSRFR 182
Query: 177 GRR-----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRS-SKSRSPRSRSKSGSPRKS 230
IR+ ED SS R RS+ R R RS S+S SPR R GSP S
Sbjct: 183 SHEGEVAYIRVKEDH----------SSGDRGRSEDRERGRSHSRSYSPRRR---GSPTYS 229
>gi|157125001|ref|XP_001654204.1| splicing factor pTSR1, putative [Aedes aegypti]
gi|108882733|gb|EAT46958.1| AAEL001889-PA [Aedes aegypti]
Length = 208
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 114/201 (56%), Gaps = 34/201 (16%)
Query: 48 RDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG 107
RDA+DA+Y++NG LLG+R+ VE K PPR G +R
Sbjct: 11 RDAEDAIYQMNGAKLLGQRIVVEGTK------------------RPPRFGGSSNRPK--- 49
Query: 108 PPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKAL 167
PP R+ HRLIVENLSSR+ W+DLK MR + +ADAH+ NEGVVEF S DMK+ L
Sbjct: 50 PPQRTYHRLIVENLSSRIDWRDLKAHMRNI---TFADAHRDRMNEGVVEFASRYDMKRVL 106
Query: 168 DKLDNAELNGRRIRLIEDKPRG--------GGRGRSRSSSSRSRSKSRSRSRSSKSRSPR 219
D+ ELNG IRL ED+ R G RSRS S +S+SRS KS R
Sbjct: 107 KMFDDTELNGTYIRLYEDRGRSRSGSRSNIGFESRSRSRSRSRSRGYQSKSRSVKS-YRR 165
Query: 220 SRSKSGSPRKSKSKAKSVSRS 240
SRS++ S +S+S+ +SVS S
Sbjct: 166 SRSRTASE-ESRSRFRSVSES 185
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 128/255 (50%), Gaps = 40/255 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+ +
Sbjct: 198 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAICGRDRY 257
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G GR SY P R + R R G RS++R++V
Sbjct: 258 NFDGYRLRVELAHG-------GRGQSYSYDRP---RSYSSGR--RGGVSRRSEYRVMVTG 305
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD++E
Sbjct: 306 LPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIRKLDDSEFR--- 362
Query: 180 IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKAKSVSR 239
++ SR+ R R +SRS KSVSR
Sbjct: 363 -------------------NAFSRAYIRVREYDDRSRSRSRSYSRSRSYSRSRSPKSVSR 403
Query: 240 SPSPSKTRKRSRSRS 254
SPSP R SRSR+
Sbjct: 404 SPSPVDERSISRSRT 418
>gi|13385016|ref|NP_079849.1| serine/arginine-rich splicing factor 9 [Mus musculus]
gi|66774167|sp|Q9D0B0.1|SRSF9_MOUSE RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|12847866|dbj|BAB27740.1| unnamed protein product [Mus musculus]
gi|15126569|gb|AAH12217.1| Splicing factor, arginine/serine rich 9 [Mus musculus]
gi|148687919|gb|EDL19866.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Mus
musculus]
Length = 222
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 97/177 (54%), Gaps = 27/177 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 16 RIYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 75
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
R+ VE R YG R GW R R GPPTR SD R++V
Sbjct: 76 YDYGQCRLRVEFP-----------RTYGG------RGGW--PRGARNGPPTRRSDFRVLV 116
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 117 SGLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 171
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 99/176 (56%), Gaps = 20/176 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDA DA+Y NG
Sbjct: 32 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRNGY 91
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G R P R + R G R+D+R++V
Sbjct: 92 DFDGHRLRVELAHG--------------GRGPSFDRSSSYSSAGRRGAAKRTDYRVMVTG 137
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKR-HRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK+A+ KLD++E
Sbjct: 138 LPSSASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSEF 193
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 99/183 (54%), Gaps = 21/183 (11%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVY 55
M GT+VY+G LP +R R++E YGRIRD+ +K F FV+FED RDA+DA+
Sbjct: 1 MSGTRVYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIR 60
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
+G G R+ VE A G R R GS R P RG G
Sbjct: 61 GRDGYDYDGARLRVEAANGGRRESARD-SARGSARYPRNIRGNGE-------------FT 106
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
+ V NL RVSWQDLKDFMR+ G+V + + R GVVE+ + DMK A++KLD+ E
Sbjct: 107 VEVSNLPPRVSWQDLKDFMRKAGDVTFTEVD--GRGGGVVEYSNKRDMKYAVEKLDDTEF 164
Query: 176 NGR 178
GR
Sbjct: 165 RGR 167
>gi|116202487|ref|XP_001227055.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
gi|88177646|gb|EAQ85114.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
Length = 324
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 114/194 (58%), Gaps = 19/194 (9%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMNGFGFIEYKDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G R +E+G G G G+ HDR+ P P R+ HR+ +
Sbjct: 65 FMGERLTVQFARG-SRHREQGGGGGGG------GGGYNHDRNS--APRPRRTPHRMQISG 115
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKDF RQ G +V Y++ ++ NEG VEFE+++D++ A++KLDN E R
Sbjct: 116 LPNDTSWQDLKDFARQSGLDVVYSETNRNGSNEGFVEFETAADLRSAVEKLDNREFKNAR 175
Query: 180 IRLI----EDKPRG 189
+ + D PRG
Sbjct: 176 VICVANTQPDIPRG 189
>gi|348518702|ref|XP_003446870.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 243
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 106/196 (54%), Gaps = 25/196 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDVEDVFYKYGIIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE RS G RG G PR RYGPP+R S++R+I
Sbjct: 76 GYDYDGYRLRVEFP----RSGRGGGRGGGGGALGTPR--------GRYGPPSRRSEYRVI 123
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 124 VSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAIRKLDNTKFRS 181
Query: 178 RR-----IRLIEDKPR 188
IR+ D PR
Sbjct: 182 HEGETAYIRVKMDGPR 197
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 127/240 (52%), Gaps = 32/240 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEF+D RDA+DAV+ +G
Sbjct: 9 CRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDG 68
Query: 60 KSLLGERVTVEIAKGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDDR-YGPPTR-SDHRL 116
G R+ VE +G S RG RG G R G G + R GPP R S +R+
Sbjct: 69 YDYDGYRLRVEFPRGGGPSNNFRGGRGAGD----SGRGGRGEMSNSRGRGPPARRSQYRV 124
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
+V L SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 125 LVTGLPPSGSWQDLKDHMREAGDVCFADVYK--DGTGVVEFLRYEDMKYAVKKLDDSRFR 182
Query: 177 GRR-----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRS-SKSRSPRSRSKSGSPRKS 230
IR+ ED +S R RS+ R R RS S+S SPR R GSP S
Sbjct: 183 SHEGEVAYIRVKEDH----------NSGDRGRSEDRERGRSHSRSYSPRRR---GSPTYS 229
>gi|225708540|gb|ACO10116.1| Splicing factor, arginine/serine-rich 5 [Osmerus mordax]
Length = 135
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 87/139 (62%), Gaps = 22/139 (15%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +++IG L RE+D+E+F KG+GRIRD+ LK GFGFVEF+D RDA+DAVYEL+GK
Sbjct: 1 MSGCRIFIGRLNPSAREKDVERFFKGFGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG-----------PP 109
L ERVT+E A+ R G G R P DRYG PP
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRGAGGGGGRFP-----------DRYGRGSQESRSRNPPP 109
Query: 110 TRSDHRLIVENLSSRVSWQ 128
R+++RLIVENLSSRVSWQ
Sbjct: 110 MRTENRLIVENLSSRVSWQ 128
>gi|398406965|ref|XP_003854948.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
gi|339474832|gb|EGP89924.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
Length = 333
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 111/216 (51%), Gaps = 36/216 (16%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNATKADVENHFNTHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSE 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+ V+ A+G +R ++ G ++ R P P R+ HR+ +
Sbjct: 67 FMGERLVVQFARGSNRPRD------------------GFEQQPRQAPRPRRTVHRMTITG 108
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGV-----VEFESSSDMKKALDKLDNAE 174
L SWQDLKDF RQ G +V Y++ + + G VE+E+++D+ A++KLDN E
Sbjct: 109 LPFETSWQDLKDFARQSGLDVVYSEVGRERDSSGTGKGSFVEYETAADLAAAVEKLDNNE 168
Query: 175 LNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRS 210
G +R I D +S R R + RSRS
Sbjct: 169 FKGATVRCISD---------PQSEIPRPRERYRSRS 195
>gi|336367304|gb|EGN95649.1| hypothetical protein SERLA73DRAFT_186792 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380022|gb|EGO21176.1| hypothetical protein SERLADRAFT_441550 [Serpula lacrymans var.
lacrymans S7.9]
Length = 324
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 106/208 (50%), Gaps = 39/208 (18%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG------------------FGFVEFED 46
++Y+G LP R D+ KF GYGRI D + G FGFVEFE+
Sbjct: 4 RLYLGRLPPDARSDDVAKFFDGYGRIVDCRVMTGSSDKRRSANPGLTAPSSGFGFVEFEN 63
Query: 47 YRDADDAVYELNGKSLLGERVTVEIAKGI----DRSQERGRRGYGSYRAPPPRRGWGHDR 102
+DA+DAV+ NGK +G + VE AK D + G RG+GS R+ RR
Sbjct: 64 SKDAEDAVHHFNGKPFMGVNIVVEFAKESRPRRDVYEGGGERGFGSARS---RR------ 114
Query: 103 DDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSD 162
PP RLIV +S SWQDLKDF R+ G V +AD + +G++E+ S D
Sbjct: 115 -----PPG---IRLIVSGISRDTSWQDLKDFGREAGSVSFADIDRDFPGQGILEYLSRDD 166
Query: 163 MKKALDKLDNAELNGRRIRLIEDKPRGG 190
+A+ LD +L GR +R+ D RGG
Sbjct: 167 ADRAVKDLDGKDLRGRPVRVALDDSRGG 194
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 20/176 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDA DA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G R P R + R G R+D+R++V
Sbjct: 69 DFDGHRLRVELAHGG--------------RGPSFDRSSSYSSAGRRGAAKRTDYRVMVTG 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKR-HRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK+A+ KLD++E
Sbjct: 115 LPSSASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSEF 170
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 126/240 (52%), Gaps = 32/240 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEF+D RDA+DAV+ +G
Sbjct: 9 CRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDG 68
Query: 60 KSLLGERVTVEIAKGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDDR-YGPPTR-SDHRL 116
G R+ VE +G S RG RG G R G G + R GPP R S +R+
Sbjct: 69 YDYDGYRLRVEFPRGGGPSNNFRGGRGAGD----SGRGGRGEMSNSRGRGPPARRSQYRV 124
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
+V L SWQDLKD MR+ G+VC+AD K GVVEF DMK A+ KLD++
Sbjct: 125 LVTGLPPSGSWQDLKDHMREAGDVCFADVFK--DGTGVVEFLRYEDMKYAVKKLDDSRFR 182
Query: 177 GRR-----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRS-SKSRSPRSRSKSGSPRKS 230
IR+ ED +S R RS+ R R RS S+S SPR R GSP S
Sbjct: 183 SHEGEVAYIRVKEDH----------NSGDRGRSEDRERGRSHSRSYSPRRR---GSPTYS 229
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 20/176 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDA DA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G R P R + R G R+D+R++V
Sbjct: 69 DFDGHRLRVELAHG--------------GRGPSFDRSSSYSSAGRRGAAKRTDYRVMVTG 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKR-HRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK+A+ KLD++E
Sbjct: 115 LPSSASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSEF 170
>gi|328770953|gb|EGF80994.1| hypothetical protein BATDEDRAFT_36927 [Batrachochytrium
dendrobatidis JAM81]
Length = 246
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 28/179 (15%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T+VYIG LP + ER++E+ + +GRIRDV NGF FVE+ D RDA D V EL+G
Sbjct: 6 TRVYIGRLPRDITEREVERLAREFGRIRDVRCLNGFAFVEYSDSRDARDCVRELDGSRYD 65
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT--RSDHRLIVENL 121
ER++V+ AK G DR DR + R D+ ++V+ L
Sbjct: 66 RERLSVQPAKS------------------------GSDRRDRPASSSLRRGDYGIVVQGL 101
Query: 122 SSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+R SWQDLKD R+VG+V + + + +G+VEF S +D A+++ D E G I
Sbjct: 102 PARTSWQDLKDLFRKVGDVIFTNID--NSGDGIVEFTSETDKNSAIEQFDKTEFQGAVI 158
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 98/183 (53%), Gaps = 20/183 (10%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVY 55
M ++Y+G LP V+ERD+E YG+IRD+ LKN F FV FED RDA+DAVY
Sbjct: 1 MTDGRIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY 60
Query: 56 ELNGKSLLGERVTVEIAK--GIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-S 112
NG L ++ VE + G S G G R+GPPTR S
Sbjct: 61 GRNGYGLGDSKLRVEYPRSSGAKFSGPMGGGERGEGGG----------PKGRFGPPTRRS 110
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDN 172
+ R+IV L SWQDLKD MR+ G+VC+AD + EGVVEF DM+ AL +LD
Sbjct: 111 EFRVIVTGLPPSGSWQDLKDHMREAGDVCFADVQR--DGEGVVEFVRREDMEYALRRLDR 168
Query: 173 AEL 175
E
Sbjct: 169 TEF 171
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 113/224 (50%), Gaps = 18/224 (8%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 8 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 67
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE +G GR S R G DR +R P RS R++V
Sbjct: 68 YDYDGYRLRVEFPRG----GGPGRYSSSSRGGNSDRGGGARDRGNRGPPARRSQFRVMVT 123
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 124 GLPASGSWQDLKDHMREAGDVCFADVYK--DGTGVVEFLRHEDMKYAIKKLDDSRFRSHE 181
Query: 180 -----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSP 218
IR+ ED R R R RS S R R + + SP
Sbjct: 182 GEVAYIRVREDSTNNDDR---RGGEYRDRSYSPRRRRGTPTYSP 222
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 135/266 (50%), Gaps = 55/266 (20%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYEL 57
G +Y+G LP +RER+++ YGRI ++ LK GF FVEFED DA+DA+Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGR 65
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
+G + G R+ VE+A G RG S+ G + G RSD+R++
Sbjct: 66 DGYNFDGHRLRVELA--------HGGRGPSSFDRSSSYSSAG-----QRGASKRSDYRVM 112
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAELN 176
V L S SWQDLKD MR+ G+VC+ D ++ G+ ++ + DMK A+ KLD++E
Sbjct: 113 VTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFR 172
Query: 177 GRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKA-- 234
++ SR+ R R ++ RSRS+S SP K++S +
Sbjct: 173 ----------------------NAFSRTYIRVREYDAR----RSRSQSKSPVKARSPSRS 206
Query: 235 --------KSVSRSPSPSKTRKRSRS 252
KS+SRSP+ SK+ RS S
Sbjct: 207 PPVSPPRDKSISRSPARSKSLPRSCS 232
>gi|432889874|ref|XP_004075374.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 245
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 98/178 (55%), Gaps = 21/178 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F F+EFED RDADDAVY +
Sbjct: 14 CRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRD 73
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE + S+ G+ R RYGPP+R S++R++
Sbjct: 74 GYDYDGYRLRVEFPRSGRGSRGGFGGIGGAPRG-------------RYGPPSRRSEYRVV 120
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 121 VSGLPQSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTKF 176
>gi|66360300|ref|XP_627232.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
gi|46228840|gb|EAK89710.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
Length = 416
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 123/249 (49%), Gaps = 26/249 (10%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
KV++G LP G E+DL+ F G I+ + LK F F+E+ED A+ A EL+G G
Sbjct: 18 KVFVGNLPPGYAEQDLKDFFSKVGEIKKLELKQRFCFIEYEDETQAEAAHRELDGVEFGG 77
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
+ + V+ + R++E Y P P G G P R R+ V NL
Sbjct: 78 QVIAVQPHDPMVRNKETNAANKPQYNRPLPSDGRG---------PPRKHFRVCVFNLDDN 128
Query: 125 VSWQDLKDFMRQVGEVCY-ADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
SW+DLKD+ RQ+GEV Y A H + + GVVE+ + +MK+AL+++ N G+ IR+
Sbjct: 129 ASWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKRALEEIPNLPFLGKSIRVE 188
Query: 184 EDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKAKSVSRSPSP 243
ED R + + +K RSP S P + +A+ R PSP
Sbjct: 189 ED------------IGQLDRELAAANGYGAKRRSPPPFSS--GPYNTGGRAR--GRYPSP 232
Query: 244 SKTRKRSRS 252
S+ R RSRS
Sbjct: 233 SRFRMRSRS 241
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 98/185 (52%), Gaps = 32/185 (17%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVYEL 57
G +Y+G LP +RER++E YG I D+ LK + FVEFED RDADDA+Y
Sbjct: 6 GRTIYVGNLPEDIREREIEDLFCKYGPIVDIDLKIPPRPPVYAFVEFEDPRDADDAIYGR 65
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRY------GPPTR 111
+G G ++ VE+A G +G DR + Y G R
Sbjct: 66 DGYDFDGCKLRVELAHG--------------------GKGPSFDRPNSYTSSGRRGALRR 105
Query: 112 SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKL 170
SD+R+IV L S SWQDLKD MR+ G+VC++D + G+VEF + DMK A+ KL
Sbjct: 106 SDYRVIVTGLPSSASWQDLKDHMRRAGDVCFSDVYPGAGAITGIVEFPNYEDMKHAIRKL 165
Query: 171 DNAEL 175
D++E
Sbjct: 166 DDSEF 170
>gi|410910210|ref|XP_003968583.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 98/178 (55%), Gaps = 21/178 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F F+EFED RDADDAVY +
Sbjct: 14 CRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRD 73
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE + S+ G+ R RYGPP+R S++R++
Sbjct: 74 GYDYDGYRLRVEFPRSGRGSRGGFGGIGGAPRG-------------RYGPPSRRSEYRVL 120
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 121 VSGLPQSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTKF 176
>gi|46134285|ref|XP_389458.1| hypothetical protein FG09282.1 [Gibberella zeae PH-1]
Length = 330
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 19/183 (10%)
Query: 3 GTKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
T++Y+G LP + D+E G G I +V L NGFGF+E++D DA D V +G
Sbjct: 6 ATRLYLGNLPRNATKTDVEAHFATHGTGEITEVKLMNGFGFIEYKDPMDARDVVPAFHGS 65
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+GER+TV+ A+G R +E G G AP PR R+ HR+ +
Sbjct: 66 DFMGERLTVQFARG-SRHREGGNFGNHERTAPRPR---------------RTPHRMQITG 109
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKDF RQ +V Y++ + G VEFE+++D++ A++KLD E G+R
Sbjct: 110 LPNDTSWQDLKDFARQSSLDVVYSETGRDSNGRGFVEFETAADLRTAVEKLDGREFKGQR 169
Query: 180 IRL 182
++L
Sbjct: 170 VQL 172
>gi|348505538|ref|XP_003440318.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 244
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 100/178 (56%), Gaps = 22/178 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F F+EFED RDADDAVY +
Sbjct: 14 CRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRD 73
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE + S+ G AP RG RYGPP+R S++R++
Sbjct: 74 GYDYDGYRLRVEFPRSGRGSRGGFGIG----GAP---RG-------RYGPPSRRSEYRVV 119
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 120 VSGLPQSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTKF 175
>gi|313233455|emb|CBY24570.1| unnamed protein product [Oikopleura dioica]
Length = 583
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 102/170 (60%), Gaps = 19/170 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
V+IG L R D+EKF KGYG +RD+ LK G+GFV+F+D DA DAV +L+GK + G+
Sbjct: 414 VFIGNLSDHARHEDIEKFFKGYGSLRDISLKGGYGFVQFKDKYDAKDAVQDLDGKEICGQ 473
Query: 66 RVTVEIAKGIDRSQERGRRGYGSYR-------------APPPRRGWGHDRDD--RYGPPT 110
+V +E++ G RGR Y R + PRR + ++R +YG P
Sbjct: 474 KVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSF-YERTAYRKYGAPK 532
Query: 111 RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRN---EGVVEF 157
++ + + +ENLS RVSWQDLKDF R+VGEV Y +AH R R G++ F
Sbjct: 533 KTKYAIEIENLSERVSWQDLKDFFRRVGEVSYGEAHDRMRCGPGRGIICF 582
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 97/176 (55%), Gaps = 27/176 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R RD+E YGRIRD+ +K F FV FEDYRDA+DA+ +G
Sbjct: 1 IYVGNLPLDIRTRDIEDLFYKYGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGI 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
S G R+ E+++G + RG R PRR RSD+R+IV N
Sbjct: 61 SFEGARLRCEMSRG---NGPRGSRQQ-------PRRDL-----------RRSDYRVIVSN 99
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD RQVGEV Y D + ++ G+VEF S S+ + A+ +LD+ E
Sbjct: 100 LPPSASWQDLKDHFRQVGEVVYTDVDRSLKSSGGIVEFASRSEQEAAIKQLDDTEF 155
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 8 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDNRDADDAVKARDG 67
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE +G RG RG S G ++R P RS R++V
Sbjct: 68 YDYDGYRLRVEFPRGGGPGSYRGSRGSTSGDRGGGSSGRDRGGNNRGPPARRSQFRVVVT 127
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKD MR+ G+VC+AD +K GVVE+ DMK A+ KLD++
Sbjct: 128 GLPASGSWQDLKDHMREAGDVCFADVYK--DGTGVVEYLRHEDMKYAIKKLDDSRFRSHE 185
Query: 180 -----IRLIEDKP----RGGGRGRSRSSSSRSR 203
IR+ ED RGGG R RS S R R
Sbjct: 186 GEVAYIRVREDSGNDDRRGGGEHRDRSYSPRRR 218
>gi|313241655|emb|CBY33880.1| unnamed protein product [Oikopleura dioica]
Length = 247
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 100/183 (54%), Gaps = 30/183 (16%)
Query: 19 DLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRS 78
D+E+F KG+G I+ + LK G+GFV FED RDA++A +L+GK + GE+V VE+AKG
Sbjct: 3 DVEEFFKGFGHIKSINLKPGYGFVVFEDRRDAEEAARDLDGKRMCGEKVDVEMAKG---P 59
Query: 79 QERGRRGYGSYRAPPPRRGWGHDRDDRYG-------------------PPTRSDHRLIVE 119
+ R+ Y P RD R G P R D + +
Sbjct: 60 GNKSRKEYSRSGDRPIV------RDTRSGFNGRRRSRSRDRGFSSRKKEPYRDDATISIT 113
Query: 120 NLSSRVSWQDLKDFMRQVGEV--CYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
NLS+R SWQDLKDF+R V + DAHK V F SS DM+KA+D++D E++G
Sbjct: 114 NLSTRCSWQDLKDFIRDNARVEPDFCDAHKYEDRIATVSFRSSGDMRKAVDRMDGFEIHG 173
Query: 178 RRI 180
R+I
Sbjct: 174 RKI 176
>gi|321263009|ref|XP_003196223.1| mRNA binding protein [Cryptococcus gattii WM276]
gi|317462698|gb|ADV24436.1| mRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 275
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 23/182 (12%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ +KVY+G LP G+++ D+E+ KG+ RI+DV L FGFVEF+ RDA+DAV+E NGK
Sbjct: 1 MTSKVYLGRLPPGLQKADVEEHFKGF-RIQDVRLMGTFGFVEFDSPRDAEDAVHEFNGKP 59
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
LLGE + VE + + R R Y R P RRG R+ V
Sbjct: 60 LLGESIVVEPTR-----ESRRRDPYEQPRPRPSRRGV----------------RINVSGF 98
Query: 122 SSRVSWQDLKDFMRQVGE-VCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SS SWQDLKD+ R G + YAD KR+ GV+E+ + + ++A+ +L ++NG +
Sbjct: 99 SSATSWQDLKDYGRLGGNTIIYADVDKRNPGHGVIEYRNMEEAQEAIRRLAGVDINGAPV 158
Query: 181 RL 182
L
Sbjct: 159 TL 160
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 101/182 (55%), Gaps = 26/182 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELN 58
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +
Sbjct: 7 CTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRD 66
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPP----RRGWGHDRDDRYGPPTRSDH 114
G G R+ VE+A G G+ SY P RRG G RS++
Sbjct: 67 GYDFDGYRLRVELAHG-------GKAQSYSYDRPSSFSSGRRG---------GVSRRSEY 110
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNA 173
R++V+ L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD
Sbjct: 111 RVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTNYDDMKYAIRKLDGT 170
Query: 174 EL 175
E
Sbjct: 171 EF 172
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 100/183 (54%), Gaps = 33/183 (18%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VRER++E YGRI D+ LK G+ F+EFED RDA+DA+ +G
Sbjct: 9 IYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKG-------IDRSQ-ERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS 112
+ G R+ VEIA G +DRS E G R G R RS
Sbjct: 69 NFDGNRLRVEIAHGGRGPPPAVDRSAAESGGRAGGVSR--------------------RS 108
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDN 172
++R++V L S SWQDLKD MR+ G+VC+A + G+V+F + DMK A+ KLD+
Sbjct: 109 EYRVMVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDAGTMGIVDFTNYDDMKYAIRKLDD 168
Query: 173 AEL 175
+E
Sbjct: 169 SEF 171
>gi|58260304|ref|XP_567562.1| mRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134116248|ref|XP_773078.1| hypothetical protein CNBJ0730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255699|gb|EAL18431.1| hypothetical protein CNBJ0730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229612|gb|AAW46045.1| mRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 274
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 23/182 (12%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ +KVY+G LP G+++ D+E+ KG+ RI+DV L FGFVEF+ RDA+DAV+E NGK
Sbjct: 1 MTSKVYLGRLPPGLQKADVEEHFKGF-RIQDVRLMGTFGFVEFDSPRDAEDAVHEFNGKP 59
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
LLGE + VE + + R R Y R P RRG R+ V
Sbjct: 60 LLGESIVVEPTR-----ESRRRDPYEQPRPRPSRRGV----------------RINVSGF 98
Query: 122 SSRVSWQDLKDFMRQVGE-VCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SS SWQDLKD+ R G + YAD KR+ GV+E+ + + ++A+ +L ++NG +
Sbjct: 99 SSETSWQDLKDYGRLGGNTIIYADVDKRNPGHGVIEYRNMEEAQEAIRRLAGVDINGAPV 158
Query: 181 RL 182
L
Sbjct: 159 TL 160
>gi|67537616|ref|XP_662582.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|40741866|gb|EAA61056.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|259482149|tpe|CBF76354.1| TPA: pre-RNA splicing factor Srp2, putative (AFU_orthologue;
AFUA_3G10100) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 103/185 (55%), Gaps = 21/185 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E+ G G+I ++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQDIEEHFSTHGTGKITEIKLMNGFGFIEYEDAMDARDIVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
GER+TV+ A+G R + ++ P R P R+ R+I+ L
Sbjct: 67 FKGERLTVQFARGPRRKE--------NFPVPTDRPNLPR--------PRRTIFRMIISGL 110
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ R G+VEFE+++D+K A++KLD E G R+
Sbjct: 111 PE-TSWQDLKDFARQSGLDVVYSET-GREPGRGIVEFETANDLKTAVEKLDGREFKGTRV 168
Query: 181 RLIED 185
+ D
Sbjct: 169 TCVPD 173
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma variegatum]
Length = 222
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 95/176 (53%), Gaps = 23/176 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D+E +G+I + LKN F FVEF+D RDA+DAV+ +G
Sbjct: 8 CRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDG 67
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE +G + RG G G R PP RR S +R++V
Sbjct: 68 YDYDGYRLRVEFPRG--SAPGRGSMGPGRGRGPPARR---------------SQYRVLVS 110
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K GVVEF DMK A+ KLD++
Sbjct: 111 GLPPSGSWQDLKDHMREAGDVCYADVFK--DGTGVVEFLRYEDMKYAVKKLDDSRF 164
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 95/176 (53%), Gaps = 23/176 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D+E +G+I + LKN F FVEF+D RDA+DAV+ +G
Sbjct: 8 CRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDG 67
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE +G + RG G G R PP RR S +R++V
Sbjct: 68 YDYDGYRLRVEFPRG--SAPGRGSMGPGRGRGPPARR---------------SQYRVLVS 110
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K GVVEF DMK A+ KLD++
Sbjct: 111 GLPPSGSWQDLKDHMREAGDVCYADVFK--DGTGVVEFLRYEDMKYAVKKLDDSRF 164
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 125/240 (52%), Gaps = 32/240 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEF+D RDA+DAV+ +G
Sbjct: 9 CRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDG 68
Query: 60 KSLLGERVTVEIAKGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDDR-YGPPTR-SDHRL 116
G R+ VE +G S RG RG G R G G + R GPP R S +R+
Sbjct: 69 YDYDGYRLRVEFPRGGGPSNNFRGGRGAGD----SGRGGRGEMSNSRGRGPPARRSQYRV 124
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
+V L SWQDLKD MR+ G+VC+AD K GVVEF DMK A+ K D++
Sbjct: 125 LVTGLPPSGSWQDLKDHMREAGDVCFADVFK--DGTGVVEFLRYEDMKYAVKKXDDSRFR 182
Query: 177 GRR-----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRS-SKSRSPRSRSKSGSPRKS 230
IR+ ED +S R RS+ R R RS S+S SPR R GSP S
Sbjct: 183 SHEGEVAYIRVKEDH----------NSGDRGRSEDRERGRSHSRSYSPRRR---GSPTYS 229
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 122/248 (49%), Gaps = 38/248 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + G G RSD R++V
Sbjct: 69 NFDGYRLRVELAHG-----GRGQSYSYDRSSSYSSARRG-------GVSRRSDFRVMVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD+++
Sbjct: 117 LPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQF---- 172
Query: 180 IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKAKSVSR 239
R++ SR+ + R S+SRS KS+SR
Sbjct: 173 ----------------RNAFSRAYIRVREYDARSRSRSRSRSYSRSPSYSRSRSPKSLSR 216
Query: 240 SPSPSKTR 247
SPSP R
Sbjct: 217 SPSPVDER 224
>gi|313232321|emb|CBY09430.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 9/186 (4%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
V++G LP G++ ++ F + YG + + L N FGF++F +DA +AV EL+GK L G
Sbjct: 9 VWMGDLPPGIKRGHVKDFFEEYGPLGGIRLMNNFGFIDFRKKKDAKEAVKELDGKKLKGA 68
Query: 66 RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRV 125
R+ +E + G S+++G Y + PP + Y P R+ + + V NLS+R
Sbjct: 69 RIRLEHSDGPGGSKKKG-EDYDAVNFPPI-----GGQSSMYERPYRTKYTISVSNLSTRF 122
Query: 126 SWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAELNGRRIRL-- 182
SW DLK+FMR+ GEV Y DAH R G V F+ + +A+ KL++ L G++IRL
Sbjct: 123 SWADLKNFMRRAGEVTYTDAHVRSGEGNGEVCFKDRKGLYRAMQKLNSTRLGGKKIRLRI 182
Query: 183 IEDKPR 188
+ED R
Sbjct: 183 VEDGSR 188
>gi|405122601|gb|AFR97367.1| mRNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 274
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 23/182 (12%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ +KVY+G LP G+++ D+E+ KG+ RI+DV L FGFVEF+ RDA+DAV+E NGK
Sbjct: 1 MTSKVYLGRLPPGLQKADVEEHFKGF-RIQDVRLMGTFGFVEFDSPRDAEDAVHEFNGKP 59
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
LLGE + VE + + R R Y R P RRG R+ V
Sbjct: 60 LLGESIVVEPTR-----ESRRRDPYEQPRPRPSRRGV----------------RINVSGF 98
Query: 122 SSRVSWQDLKDFMRQVGE-VCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SS SWQDLKD+ R G + YAD KR+ GV+E+ + + ++A+ +L ++NG +
Sbjct: 99 SSATSWQDLKDYGRLGGNTIIYADVDKRNPGHGVIEYRNMEEAQEAIRRLAGVDINGAPV 158
Query: 181 RL 182
L
Sbjct: 159 TL 160
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 19/179 (10%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYEL 57
G +Y+G LP +RER+++ YGRI ++ LK GF FVEFED RDA+DA+Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGR 65
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
+G + G R+ VE+A G RG S+ G + G RSD+R++
Sbjct: 66 DGYNFDGHRLRVELA--------HGGRGTSSFDRSSSYSSAG-----QRGASKRSDYRVM 112
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
V L S SWQDLKD MR+ G+VC+ D ++ G+ ++ + DMK A+ KLD++E
Sbjct: 113 VTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEF 171
>gi|53130016|emb|CAG31434.1| hypothetical protein RCJMB04_6g11 [Gallus gallus]
Length = 123
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 85/128 (66%), Gaps = 7/128 (5%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
L ERVT+E A+ R + RGR D R PP R+++RLIVEN
Sbjct: 61 ELCSERVTIEHARARSRGRGRGRYSDRFSSR-------RPRSDRRSAPPLRTENRLIVEN 113
Query: 121 LSSRVSWQ 128
LSSRVSWQ
Sbjct: 114 LSSRVSWQ 121
>gi|346977018|gb|EGY20470.1| pre-mRNA splicing factor [Verticillium dahliae VdLs.17]
Length = 322
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 128/254 (50%), Gaps = 26/254 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V + ++E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKAEVEGHFATHGTGEITEIKLMNGFGFIEYKDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G R ++ G AP + ++R P P R+ HR+ +
Sbjct: 65 FMGERLTVQFARGT-RHRDGGA-------APGGFNNNNNTHNERAAPRPRRTQHRMQITG 116
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKDF RQ +V Y++ + G VEFE+++D++ A++KLD E G+
Sbjct: 117 LPTDTSWQDLKDFARQSSLDVVYSETGRDGNGRGFVEFETAADLRTAVEKLDGREFKGKP 176
Query: 180 IRLIEDK----PRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSG--------SP 227
+ + D P RGRSRS + R + PR S G SP
Sbjct: 177 VNCVADTQPDIPPRDNRGRSRSPNGRRPPPPPPVDDYDRRGPPRGYSPRGYRDGYRDRSP 236
Query: 228 RKSKSKAKSVSRSP 241
R+ ++ RSP
Sbjct: 237 RREYYDERARYRSP 250
>gi|156380790|ref|XP_001631950.1| predicted protein [Nematostella vectensis]
gi|156218999|gb|EDO39887.1| predicted protein [Nematostella vectensis]
Length = 135
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ +VY+G LPYG E D+ +F + YGR+RD+ LKN +GFVEFED RDADDAVYE NGK
Sbjct: 1 MNCRVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDADDAVYECNGKE 60
Query: 62 LLGERVTVE--IAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD-DRYGPPTRSDHRLIV 118
+LGER+ VE S R + S A H RYGPP R+ R+ +
Sbjct: 61 MLGERILVEHSRGGARSSSSRPSRYSHNSDFAYCILHCKTHICSAARYGPPVRTPWRMTI 120
Query: 119 ENLSSRVSWQ 128
ENLSSRVSWQ
Sbjct: 121 ENLSSRVSWQ 130
>gi|428673079|gb|EKX73992.1| pre-mRNA splicing factor, putative [Babesia equi]
Length = 325
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 112/215 (52%), Gaps = 32/215 (14%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-------FGFVEFEDYRDADDAVYELN 58
V++G LP V +RD+ + YG IRD+ +K+G + F+EFE R A+DAV +
Sbjct: 15 VFVGNLPEKVDDRDIHEIFDKYGEIRDIDIKHGKTSNYTSYAFIEFESVRSAEDAVECRD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G R+ VE A +++ RR PR + DR RY PPTR+D+RL++
Sbjct: 75 GYEFDRYRLRVEFA-----GEKKSRRH--------PRSSY-EDRGSRYPPPTRTDYRLVI 120
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL--- 175
NL WQ LKD MR+ G V Y + G V+F SDMK AL KLD EL
Sbjct: 121 SNLPHGCRWQHLKDHMRKAGPVGYVNI---QHGRGYVDFMHKSDMKYALRKLDGTELSTS 177
Query: 176 -NGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSR 209
+ RIR+ +D R R RSR + R RS SR R
Sbjct: 178 EDSARIRIKKDDYR---RSRSR-DAYRRRSHSRGR 208
>gi|378727012|gb|EHY53471.1| hypothetical protein HMPREF1120_01663 [Exophiala dermatitidis
NIH/UT8656]
Length = 316
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 120/255 (47%), Gaps = 45/255 (17%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + ++D++ G G I+++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNITKQDIQDHFGTHGAGSIKEIKLMNGFGFIEYEDPMDARDVVPAFHGTE 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-------PTRSDH 114
GER+TV+ A+G PRR +DD GP P R+ +
Sbjct: 67 FKGERLTVQFARG-------------------PRR-----KDDFNGPSDRNIPRPRRTIY 102
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGE--VCYADAHKRHRNEGVVEFESSSDMKKALDKLDN 172
R+ + L SWQDLKDF R G+ V Y++ + +G VEFE+ +D+K A++KLD
Sbjct: 103 RMQITGLQPDTSWQDLKDFARNSGQLDVVYSETGRERDGKGFVEFETQADLKTAVEKLDG 162
Query: 173 AELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKS----RSPRSRSKSGSPR 228
G + + D R S R RS R R R P R SPR
Sbjct: 163 QTFKGATVHCVADI----QDERPDMRSYRQRSPPRGRYGPMDDYHDRRGPPQRGW--SPR 216
Query: 229 KSKSKAKSVSRSPSP 243
S + +S R P P
Sbjct: 217 GSGYRERSPGRRPPP 231
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 118/224 (52%), Gaps = 21/224 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + G G RSD R++V
Sbjct: 72 NFDGYRLRVELAHG-----GRGQSYSYDRSSSYSSACRG-------GVSRRSDFRVMVTG 119
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD+++
Sbjct: 120 LPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAF 179
Query: 180 IRL---IEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRS 220
R + + S SR+ S SRSRS S S+SP S
Sbjct: 180 SRAYIRVREYDARSRSRSRSHSYSRTPSYSRSRSPKSVSQSPSS 223
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 95/176 (53%), Gaps = 24/176 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++VY+G LP +R +D+E YG+I + LKN F FVEFED RDA+DAV +G
Sbjct: 7 SRVYVGNLPPDIRTKDIEDLFHKYGKITFIDLKNRRGPPFAFVEFEDPRDAEDAVSARDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G ++ VE +G + R R G R PP RR S +R+IV
Sbjct: 67 YDYDGYKLRVEFPRG---NSARPRGGPSRGRGPPARR---------------SQYRVIVT 108
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD +K GVVEF DMK A+ KLD++
Sbjct: 109 GLPPTGSWQDLKDHMREAGDVCYADVYK--DGTGVVEFLRYEDMKYAVKKLDDSRF 162
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 96/178 (53%), Gaps = 24/178 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E +G IRD+ LKN F FVEFED RD+ DAVYE +
Sbjct: 15 CRIYVGNLPPDIRSKDIEDLFYKFGAIRDIDLKNRRGGPPFAFVEFEDPRDSGDAVYERD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE +G RG + RYGPP+R SD+R++
Sbjct: 75 GYDYDGYRLRVEFPRGGRGGGGRGMGPPRT----------------RYGPPSRRSDYRVV 118
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCY D ++ GVVEF DM A+ KLDN +
Sbjct: 119 VSGLPQSGSWQDLKDHMREAGDVCYTDVYR--DGTGVVEFVRKEDMTYAVRKLDNTKF 174
>gi|389640647|ref|XP_003717956.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
gi|351640509|gb|EHA48372.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
Length = 331
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 109/202 (53%), Gaps = 13/202 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+ G G+I ++ L NGFGF+E++D DA D V +G +
Sbjct: 7 TRLYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMNGFGFIEYDDPLDARDVVPAFHGST 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G R R G G G +R GP P R+ R+ +
Sbjct: 67 FMGERLTVQFARGT-----RNREGGSGGGGGGGGGGGGGYGGERSGPRPRRTAFRMQISG 121
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKDF RQ +V Y++ + + EG VEFE+++D+ A++ LD E +
Sbjct: 122 LPVDTSWQDLKDFARQSQLDVVYSETGRNNNGEGFVEFETAADLASAVEALDGKEFKDKI 181
Query: 180 IRLI----EDKPRGGGRGRSRS 197
+R + D P GRGRSRS
Sbjct: 182 VRCVANTQPDPPPRDGRGRSRS 203
>gi|32563822|ref|NP_871914.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
gi|26985892|emb|CAD59160.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
Length = 150
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 28/152 (18%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++YIG L V E+D+E F +GYG+IRDV+LKNGFGFVEF+D RDA+DAV++LNGK
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 62 LLGERVTVEIAK----------------------GIDRSQERGRRGYGSYRAPPPRRGWG 99
L GERV ++ +K GR + Y PPR
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPR---- 116
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLK 131
R+ RYG P + HR++VENLSSR+SWQ K
Sbjct: 117 --RESRYGRPYSTRHRVVVENLSSRISWQVCK 146
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R+ + L+SRVS +D++ F R G++ D ++ G VEF+ D + A+ L+ E
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQI--RDVLLKN-GFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 175 LNGRRIRLIEDKPRG 189
L G R+ L KPRG
Sbjct: 61 LGGERVILDYSKPRG 75
>gi|320038617|gb|EFW20552.1| pre-RNA splicing factor Srp2 [Coccidioides posadasii str. Silveira]
gi|392870837|gb|EJB12074.1| pre-RNA splicing factor Srp2 [Coccidioides immitis RS]
Length = 302
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 20/185 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E+ G G+I D+ L +GFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKLMSGFGFIEYEDALDARDVVPAYHGTD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
G R+TV+ A+G R +E AP PR R+ +R+ + L
Sbjct: 67 FKGSRLTVQFARGP-RHKETFSGPSDRSNAPRPR---------------RTPYRMQISGL 110
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ + H G VEFE+ +D+K A++KLD E G R+
Sbjct: 111 PE-TSWQDLKDFARQSGLDVVYSETLRDHEGRGFVEFETGADLKTAIEKLDGREFKGSRV 169
Query: 181 RLIED 185
+D
Sbjct: 170 TCTQD 174
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 114/229 (49%), Gaps = 41/229 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E YG I D+ LK G+ FVEFED RDA+DA+Y +G
Sbjct: 9 IYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD-DRY--------GPPTR 111
G R+ VE A G G GH DRY G P R
Sbjct: 69 KFDGCRLRVEFAHG----------------------GRGHSSSVDRYSRSGSSRGGVPRR 106
Query: 112 SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKL 170
+D+R++V L S SWQDLKD MR+ G+VC+++ + R G+V++ + DMK A+ KL
Sbjct: 107 TDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKL 166
Query: 171 DNAEL-NGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSP 218
D++E N + K SRS S SR SR S SRSP
Sbjct: 167 DDSEFRNAFSRAYVRVKEYDSRHSYSRSPSLDSRRSDYSR---SPSRSP 212
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 94/176 (53%), Gaps = 23/176 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D+E +G+I + LKN F FVEF+D RDA+DAV +G
Sbjct: 8 CRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVQARDG 67
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE +G + RG G G R PP RR S +R++V
Sbjct: 68 YDYDGYRLRVEFPRG--SAPGRGSMGPGRGRGPPARR---------------SQYRVLVS 110
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K GVVEF DMK A+ KLD++
Sbjct: 111 GLPPSGSWQDLKDHMREAGDVCYADVFK--DGTGVVEFLRYEDMKYAVKKLDDSRF 164
>gi|209876590|ref|XP_002139737.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555343|gb|EEA05388.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 377
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 121/252 (48%), Gaps = 34/252 (13%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
KV++G LP G E+DL F G I + LK F F+E+E+ A+ A EL+G G
Sbjct: 10 KVFVGNLPAGYAEQDLRDFFSKVGTISKLELKQRFCFIEYEEESQAEAAHRELDGVEFGG 69
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
+R+ V+ + R+++ Y P P G G P R +R+ V NL
Sbjct: 70 QRIAVQPHDPLVRTKDVENTNKPQYNRPLPSDGRG---------PPRKHYRVCVFNLDEN 120
Query: 125 VSWQDLKDFMRQVGEVCY-ADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
SW+DLKD+ RQ+GEV Y A H + + GVVE+ + +MK+AL+++ N G+ IR
Sbjct: 121 ASWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKRALEEIPNLPFLGKTIRAE 180
Query: 184 EDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSK---SGSPRKSKSKAKSVSRS 240
ED R + + K RSP S S G PR SR
Sbjct: 181 ED------------VGQLDRELAAANGYGIKRRSPPSYSSGPYGGRPR---------SRY 219
Query: 241 PSPSKTRKRSRS 252
PSP + R+RSRS
Sbjct: 220 PSPPRYRQRSRS 231
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans morsitans]
Length = 236
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 100/177 (56%), Gaps = 12/177 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
+++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 7 SRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT-RSDHRLIV 118
G R+ VE +G R++ R RG + G GPPT RS +R++V
Sbjct: 67 YDYDGYRLRVEFPRGGGRNEHRNNRG-----NERGNQREGGRGGGGRGPPTKRSQYRVLV 121
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 122 TGLPSSGSWQDLKDHMREAGDVCFADTYK--DGTGVVEFLRHEDMKYAIKKLDDSRF 176
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 126/238 (52%), Gaps = 24/238 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNG 59
+++Y+G LP VR +D+E +G++ V LK+ F FVEFED RDA+DAV +G
Sbjct: 5 SRIYVGNLPTSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRDG 64
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGS---YRAPPPRRGWGHDRDDRYGPPTRSDHRL 116
G R+ VE +G+ GR +G+ Y G+G R+++R+
Sbjct: 65 YDFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRV 124
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
IV L + SWQDLKD MR+ G+VCYAD + GVVE+ DMK A+ KLD+ +
Sbjct: 125 IVTGLPTSGSWQDLKDHMREAGDVCYADITR--DGTGVVEYARLDDMKYAIRKLDDTKFK 182
Query: 177 GRR-----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSP---RSRSKSGS 226
IR+ ED GGGR RSRS +R+ +R S SP RSRS+S S
Sbjct: 183 SHEGETAYIRVREDDINGGGRSRSRSPMARA-------TRGSPQYSPKGGRSRSRSTS 233
>gi|156030683|ref|XP_001584668.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980]
gi|154700828|gb|EDO00567.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 307
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNATKADVEAHFNTHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+TV+ A+G R R + + PR P R+ HR+ + L
Sbjct: 67 FMGERLTVQFARGT-----RNRDTFANPERTAPR-------------PRRTPHRMQISGL 108
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEG-VVEFESSSDMKKALDKLDNAELNGRR 179
SWQDLKDF RQ +V Y++ + +G VEFE+++D+K A++KLD E G R
Sbjct: 109 PGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGREFKGAR 168
Query: 180 IRLIEDKPRGGGRGRSRSSSSRSRSK 205
+ D R R+RS S R +
Sbjct: 169 VTCTADTQPDLPRDRARSRSPIPRGR 194
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 112/204 (54%), Gaps = 19/204 (9%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEF+D RDA+DAV+ +G
Sbjct: 9 CRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDG 68
Query: 60 KSLLGERVTVEIAKGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDDRY-GPPTR-SDHRL 116
G R+ VE +G S RG RG G R G G + R GPP R S +R+
Sbjct: 69 YDYDGYRLRVEFPRGGGPSNNFRGGRGAGD----SGRGGRGEMSNSRGRGPPARRSQYRV 124
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
+V L SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 125 LVSGLPPSGSWQDLKDHMREAGDVCFADVYK--DGTGVVEFLRHDDMKYAVKKLDDSRFR 182
Query: 177 GRR-----IRLIEDKPRGGGRGRS 195
IR+ ED GG RGRS
Sbjct: 183 SHEGEVAYIRVKEDH-SGGDRGRS 205
>gi|348532825|ref|XP_003453906.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oreochromis
niloticus]
Length = 241
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 91/180 (50%), Gaps = 22/180 (12%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVY 55
M ++Y+G LP V+ERD+E YG+IR++ LKN F FV FED RDADDAVY
Sbjct: 1 MSDGRIYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIPFAFVRFEDPRDADDAVY 60
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
NG ++ VE + G PP RR S+ R
Sbjct: 61 GRNGYGYGDSKLRVEYPRSKPGPMGGGGGAPRGRFGPPTRR---------------SEFR 105
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
+IV L SWQDLKD MR+ G+VC+AD + EGVVEF DM+ AL +LD E
Sbjct: 106 VIVSGLPPSGSWQDLKDHMREAGDVCFADVQR--DGEGVVEFLRREDMEYALRRLDGTEF 163
>gi|317036141|ref|XP_001397700.2| pre-RNA splicing factor Srp2 [Aspergillus niger CBS 513.88]
gi|358368362|dbj|GAA84979.1| pre-RNA splicing factor Srp2 [Aspergillus kawachii IFO 4308]
Length = 301
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 23/186 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E+ G G+I ++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMNGFGFIEYEDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
GER+TV+ A+G R + ++ P DR + P P R+ R++V
Sbjct: 67 FKGERLTVQFARGPRRKE--------NFPGP-------MDRPNM--PRPRRTIFRMMVSG 109
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKDF RQ G +V Y++ R G VEFE+++D+K A++KLD E G R
Sbjct: 110 LPE-TSWQDLKDFARQSGLDVVYSET-GRELGRGFVEFETANDLKTAIEKLDGREFKGSR 167
Query: 180 IRLIED 185
+ I D
Sbjct: 168 VTCIAD 173
>gi|32563820|ref|NP_871913.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
gi|26985891|emb|CAD59159.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
Length = 148
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 28/152 (18%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ ++YIG L V E+D+E F +GYG+IRDV+LKNGFGFVEF+D RDA+DAV++LNGK
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 62 LLGERVTVEIAK----------------------GIDRSQERGRRGYGSYRAPPPRRGWG 99
L GERV ++ +K GR + Y PPR
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPR---- 116
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLK 131
R+ RYG P + HR++VENLSSR+SWQ K
Sbjct: 117 --RESRYGRPYSTRHRVVVENLSSRISWQQEK 146
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R+ + L+SRVS +D++ F R G++ D ++ G VEF+ D + A+ L+ E
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQI--RDVLLKN-GFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 175 LNGRRIRLIEDKPRG 189
L G R+ L KPRG
Sbjct: 61 LGGERVILDYSKPRG 75
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 105/210 (50%), Gaps = 30/210 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEY 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R+IV L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN +
Sbjct: 122 RVIVSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 LNGRR-----IRLIEDKPRGGGRGRSRSSS 199
IR+ D PR GRSRS S
Sbjct: 180 FRSHEGETAYIRVKVDGPRSPSYGRSRSRS 209
>gi|302828648|ref|XP_002945891.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
gi|300268706|gb|EFJ52886.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
Length = 288
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 105/197 (53%), Gaps = 33/197 (16%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYEL 57
G +++G LP VRE++L++ +GRIR + +K GF F+EF+D R A++A
Sbjct: 9 GRAIFVGNLPIDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFIEFDDPRSAEEAARRR 68
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSD--HR 115
N G R+ VEIA+G G GS P R G+ P R+ R
Sbjct: 69 NNYEFAGMRMRVEIARG----------GEGSGSQQPLRIGYR---------PIRNTLGFR 109
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE--GVVEFESSSDMKKALDKLDNA 173
L V+ L SWQDLKDF+R+V + Y + K HR+ GVVEFES DMK AL KLD++
Sbjct: 110 LYVKGLPRSASWQDLKDFVRRVCKPLYTEIFKDHRDNVLGVVEFESKDDMKAALRKLDDS 169
Query: 174 ELN-----GRRIRLIED 185
E G +RL+ED
Sbjct: 170 EFTNPFDKGHYVRLVED 186
>gi|302791860|ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
gi|300154399|gb|EFJ21034.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
Length = 298
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 106/199 (53%), Gaps = 34/199 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VRER+++ YG I D+ LK G+ F+EFED RDA+DA+ +G
Sbjct: 8 IYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIRGRDGY 67
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG-----PPTRSDHR 115
+ G R+ VEIA G R PP DR YG RS++R
Sbjct: 68 NFDGYRLRVEIAHG--------------GRGPP-----SSDRYSSYGGRGGSVSRRSEYR 108
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKR-HRNEGVVEFESSSDMKKALDKLDNAE 174
+I+ L S SWQDLKD MR+ G+VC+A + + G+V+F + DMK A+ KLD++E
Sbjct: 109 VIITGLPSSASWQDLKDHMRRAGDVCFAQVFREGNGTTGIVDFTNYDDMKYAIKKLDDSE 168
Query: 175 LNG----RRIRLIEDKPRG 189
IR+ EDK +G
Sbjct: 169 FRNPFSRSYIRVKEDKSQG 187
>gi|154304025|ref|XP_001552418.1| pre-mRNA splicing factor [Botryotinia fuckeliana B05.10]
Length = 308
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRSATKADVEAHFNTHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G R R + + +R P P R+ HR+ +
Sbjct: 67 FMGERLTVQFARGT-----RNRDTFAN-------------NPERTAPRPRRTPHRMQISG 108
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEG-VVEFESSSDMKKALDKLDNAELNGR 178
L SWQDLKDF RQ +V Y++ + +G VEFE+++D+K A++KLD E G
Sbjct: 109 LPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGREFKGA 168
Query: 179 RIRLIEDKPRGGGRGRSRSSSSRSRSK 205
R+ D R R+RS S R +
Sbjct: 169 RVTCTADTQPDIPRDRARSRSPMPRGR 195
>gi|347441498|emb|CCD34419.1| hypothetical protein [Botryotinia fuckeliana]
Length = 324
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRSATKADVEAHFNTHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G R R + + +R P P R+ HR+ +
Sbjct: 67 FMGERLTVQFARGT-----RNRDTFAN-------------NPERTAPRPRRTPHRMQISG 108
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEG-VVEFESSSDMKKALDKLDNAELNGR 178
L SWQDLKDF RQ +V Y++ + +G VEFE+++D+K A++KLD E G
Sbjct: 109 LPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGREFKGA 168
Query: 179 RIRLIEDKPRGGGRGRSRSSSSRSRSK 205
R+ D R R+RS S R +
Sbjct: 169 RVTCTADTQPDIPRDRARSRSPMPRGR 195
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 18/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + G G RSD R++V
Sbjct: 72 NFDGYRLRVELAHG-----GRGQSYSYDRSSSYSSACRG-------GVSRRSDFRVMVTG 119
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD+++
Sbjct: 120 LPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQF 175
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 18/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + G G RSD R++V
Sbjct: 72 NFDGYRLRVELAHG-----GRGQSYSYDRSSSYSSACRG-------GVSRRSDFRVMVTG 119
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD+++
Sbjct: 120 LPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQF 175
>gi|324502984|gb|ADY41304.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 122
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 70/96 (72%), Gaps = 8/96 (8%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ +VYIG L Y ERD+E F +GYGRIRD++LKNGFGFVEF+D RDADDAVYELNGK
Sbjct: 1 MSARVYIGRLSYRASERDIEHFFRGYGRIRDIVLKNGFGFVEFDDPRDADDAVYELNGKD 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSY-RAPPPRR 96
L GER+ +E ++ RG RG G Y R PPPRR
Sbjct: 61 LCGERIILEFSR-------RGPRGRGMYDRYPPPRR 89
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 18/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + G G RSD R++V
Sbjct: 69 NFDGYRLRVELAHG-----GRGQSYSYDRSSSYSSACRG-------GVSRRSDFRVMVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD+++
Sbjct: 117 LPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQF 172
>gi|453083473|gb|EMF11519.1| hypothetical protein SEPMUDRAFT_150428 [Mycosphaerella populorum
SO2202]
Length = 359
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 28/184 (15%)
Query: 24 VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGR 83
G G I ++ L NGFGF+E++D DA D V +G +GER+ V+ A+G R
Sbjct: 57 THGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSEFMGERLVVQFARGSTR------ 110
Query: 84 RGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVC 141
PR G+ H R P P R+ HR+ + L SWQDLKDF RQ G +V
Sbjct: 111 ----------PREGFEH--QPRMAPRPRRTVHRMTITGLPFETSWQDLKDFARQSGLDVV 158
Query: 142 YADAHKRH----RNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDK----PRGGGRG 193
Y++ ++ +G VE+E+++D+ A++KLDN+E G +R I D PR R
Sbjct: 159 YSEVNRERDPAGTGKGFVEYETAADLASAVEKLDNSEFKGATVRCISDPQADVPRPRERF 218
Query: 194 RSRS 197
RSRS
Sbjct: 219 RSRS 222
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 58/152 (38%), Gaps = 49/152 (32%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILK----------NGFGFVEFEDYRDADDAV 54
++ I GLP+ +DL+ F + G DV+ G GFVE+E D AV
Sbjct: 131 RMTITGLPFETSWQDLKDFARQSGL--DVVYSEVNRERDPAGTGKGFVEYETAADLASAV 188
Query: 55 YELNGKSLLGE--RVTVEIAKGIDRSQERGR----------------------------R 84
+L+ G R + + R +ER R R
Sbjct: 189 EKLDNSEFKGATVRCISDPQADVPRPRERFRSRSPGFRGGGRGGYGPPPDDYYDRRGPPR 248
Query: 85 GYGSYR------APPPRRGWGHD-RDDRYGPP 109
GY R PPPR +G D RDDRYGPP
Sbjct: 249 GYSPRRDDYRRRTPPPRDYYGGDPRDDRYGPP 280
>gi|425767261|gb|EKV05835.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum
PHI26]
gi|425780059|gb|EKV18081.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum Pd1]
Length = 303
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 21/185 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V + D+E+ G G+I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMNGFGFIEYDDQLDARDIVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
GER+TV+ A+G R + +++ PP R P R+ R+ + L
Sbjct: 67 FKGERLTVQFARGPRRKE--------AFQGPPDRNALPR--------PRRTMFRMQISGL 110
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ R + G VEFE++SD+K A++KLD E G +
Sbjct: 111 PE-TSWQDLKDFARQSGLDVVYSET-GREQGRGFVEFETASDLKTAVEKLDQREFKGSVV 168
Query: 181 RLIED 185
+ D
Sbjct: 169 SCVAD 173
>gi|395833916|ref|XP_003789963.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1
[Otolemur garnettii]
gi|395833918|ref|XP_003789964.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2
[Otolemur garnettii]
Length = 221
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 93/177 (52%), Gaps = 27/177 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
R+ VE + R G R GPPTR SD R++V
Sbjct: 75 YDYGQCRLRVEFPRTYGGQGGWPRGG-------------------RNGPPTRRSDFRVLV 115
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 116 SGLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 170
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 18/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + G G RSD R++V
Sbjct: 72 NFDGYRLRVELAHG-----GRGQSYSYDRSSSYSSACRG-------GVSRRSDFRVMVTG 119
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD+++
Sbjct: 120 LPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQF 175
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 19/179 (10%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYEL 57
G +Y+G LP +RER+++ YGRI ++ LK GF FVEFED RDA+DA+Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGR 65
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
+G + G R+ VE+A G RG S+ G + G RSD+R++
Sbjct: 66 DGYNFDGHRLRVELA--------HGGRGTSSFDRSSSYSSAG-----QRGASKRSDYRVM 112
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
V L S SWQDLKD MR+ G+VC+ D ++ G+ ++ + DMK A+ KLD++E
Sbjct: 113 VTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEF 171
>gi|302795628|ref|XP_002979577.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
gi|300152825|gb|EFJ19466.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
Length = 236
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 106/199 (53%), Gaps = 34/199 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VRER+++ YG I D+ LK G+ F+EFED RDA+DA+ +G
Sbjct: 6 IYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIRGRDGY 65
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG-----PPTRSDHR 115
+ G R+ VEIA G R PP DR YG RS++R
Sbjct: 66 NFDGYRLRVEIAHGG--------------RGPP-----SSDRYSSYGGRGGSVSRRSEYR 106
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKR-HRNEGVVEFESSSDMKKALDKLDNAE 174
+I+ L S SWQDLKD MR+ G+VC+A + + G+V+F + DMK A+ KLD++E
Sbjct: 107 VIITGLPSSASWQDLKDHMRRAGDVCFAQVFREGNGTTGIVDFTNYDDMKYAIKKLDDSE 166
Query: 175 LNG----RRIRLIEDKPRG 189
IR+ EDK +G
Sbjct: 167 FRNPFSRSYIRVKEDKSQG 185
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 30/184 (16%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNG 59
K+++G LP + E +LEK +G+I +VILK F F+E+ED RDA+DAV +++G
Sbjct: 26 KIFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHG 85
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
K L G + VEI+ R G RD+++G + R+ +
Sbjct: 86 KELHGAEIRVEIS----------------------RNGPKASRDEKFGGRHHGTQFRVEL 123
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
N+ VSWQDLKDF+R G V +AD +R GV F + +M++A+ KL +A+LNG
Sbjct: 124 SNIPRSVSWQDLKDFLRIGGVVVHADVDRR--GNGVASFTNQQEMERAIRKLKDAKLNGE 181
Query: 179 RIRL 182
RI++
Sbjct: 182 RIKI 185
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 104/187 (55%), Gaps = 13/187 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEF+D RDA+DAV+ +G
Sbjct: 9 CRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDG 68
Query: 60 KSLLGERVTVEIAKGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDDRY-GPPTR-SDHRL 116
G R+ VE +G S RG RG G R G G + R GPP R S +R+
Sbjct: 69 YDYDGYRLRVEFPRGGGPSNNFRGGRGAGD----SGRGGRGEMSNSRGRGPPARRSQYRV 124
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
+V L SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 125 LVTGLPPSGSWQDLKDHMREAGDVCFADVYK--DGTGVVEFLRHDDMKYAVKKLDDSRFR 182
Query: 177 GRRIRLI 183
+ +I
Sbjct: 183 SHEVSII 189
>gi|440637919|gb|ELR07838.1| hypothetical protein GMDG_00459 [Geomyces destructans 20631-21]
Length = 296
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 101/186 (54%), Gaps = 22/186 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I+++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRDATKADVEAHFATHGTGTIKEIKLMNGFGFIEYEDAMDARDVVPAFHGSE 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
L G+R+TV+ A+G S++R AP PR R+ HR+ + L
Sbjct: 67 LKGDRLTVQFARG---SRQRDNFAATDRTAPRPR---------------RTPHRMQISGL 108
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEG-VVEFESSSDMKKALDKLDNAELNGRR 179
S SWQDLKDF RQ +V Y++ + +G VEFE+++D++ A++KLD E G R
Sbjct: 109 SGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLRTAVEKLDGREFKGAR 168
Query: 180 IRLIED 185
+ D
Sbjct: 169 VTCTAD 174
>gi|402085269|gb|EJT80167.1| hypothetical protein GGTG_00170 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 318
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 18/205 (8%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+ G G+I ++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRQATKEDVASHFGAHGTGKITEIKLMNGFGFIEYEDMMDARDVVPAFHGSQ 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G S+ R G + +R P P R+ +R+ +
Sbjct: 67 FMGERLTVQFARG---SRNRDGGGGAGNGS--------GFSGERSAPRPRRTPYRMQISG 115
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKDF RQ +V Y++ + + EG VEFE+++D+ A+D LD E +
Sbjct: 116 LPNDTSWQDLKDFARQSQLDVVYSETGRSNNGEGFVEFETAADLATAVDALDGKEFKEKV 175
Query: 180 IRLIEDK---PRGGGRGRSRSSSSR 201
+R + + P RGRSRS R
Sbjct: 176 VRCVANAQADPPVRDRGRSRSPPGR 200
>gi|402085268|gb|EJT80166.1| hypothetical protein, variant [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 317
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 18/205 (8%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+ G G+I ++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRQATKEDVASHFGAHGTGKITEIKLMNGFGFIEYEDMMDARDVVPAFHGSQ 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G S+ R G + +R P P R+ +R+ +
Sbjct: 67 FMGERLTVQFARG---SRNRDGGGGAGNGS--------GFSGERSAPRPRRTPYRMQISG 115
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKDF RQ +V Y++ + + EG VEFE+++D+ A+D LD E +
Sbjct: 116 LPNDTSWQDLKDFARQSQLDVVYSETGRSNNGEGFVEFETAADLATAVDALDGKEFKEKV 175
Query: 180 IRLIEDK---PRGGGRGRSRSSSSR 201
+R + + P RGRSRS R
Sbjct: 176 VRCVANAQADPPVRDRGRSRSPPGR 200
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 18/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + G G RSD R++V
Sbjct: 69 NFDGYRLRVELAHG-----GRGQSYSYDRSSSYSSACRG-------GVSRRSDFRVMVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD+++
Sbjct: 117 LPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQF 172
>gi|393245625|gb|EJD53135.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 100/178 (56%), Gaps = 13/178 (7%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G +P R D++KF +GYGRI D + GFGFVEFE +DA++ V NGK+ +G
Sbjct: 4 RLYLGRIPTDARSEDVQKFFEGYGRIVDCRVMTGFGFVEFESSKDAEEVVQVFNGKAFMG 63
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
+ VE AK +R + RGYG A PPR R P RLIV +S
Sbjct: 64 APILVEFAKE-NRPRRDDDRGYGGGGAYPPRA--------RRPPGV----RLIVSGISRD 110
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SWQDLKDF R+ G + +AD + +GV+E+ S D A+ LD +L G+ +R+
Sbjct: 111 TSWQDLKDFGREAGNITFADIDRDVPGQGVLEYMSRDDADHAVKTLDGKDLRGQPVRV 168
>gi|322694046|gb|EFY85887.1| pre-mRNA splicing factor [Metarhizium acridum CQMa 102]
Length = 314
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 111/205 (54%), Gaps = 26/205 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I +V L NGFGF+E++D DA D V +G
Sbjct: 8 TRLYLGNLPRNATKADIEAHFATHGTGDITEVKLMNGFGFIEYKDPMDARDVV--PDGSD 65
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+TV+ A+G R +E G G H+R R+ HR+ + L
Sbjct: 66 FMGERLTVQFARGP-RQRESGFSG--------------HERAPPRP--RRTPHRMQITGL 108
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+ SWQDLKDF RQ G +V Y++ + G VE+E+++D++ A+DKLD E G R+
Sbjct: 109 PNETSWQDLKDFARQPGLDVVYSETGRDSNGRGFVEYETAADLRTAVDKLDGREFKGNRV 168
Query: 181 RLIEDK----PRGGGRGRSRSSSSR 201
+ I D P GRGRSRS R
Sbjct: 169 QCIADTQPDMPPRDGRGRSRSPGGR 193
>gi|291190420|ref|NP_001167114.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
gi|223648208|gb|ACN10862.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
Length = 251
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 96/178 (53%), Gaps = 18/178 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F F+EFED RDADDAVY +
Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE + G G G A RYGPP+R S++R+I
Sbjct: 75 GYDYDGYRLRVEFPRSGRGGGRGGFGGGGVGGA----------PRGRYGPPSRRSEYRVI 124
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN +
Sbjct: 125 VSGLPQSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDNTKF 180
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 19/179 (10%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYEL 57
G +Y+G LP +RER+++ YGRI ++ LK GF FVEFED RDA+DA+Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGR 65
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
+G + G R+ VE+A G RG S+ G G RSD+R++
Sbjct: 66 DGYNFDGHRLRVELA--------HGGRGTSSFDRSSSYSSAGQR-----GASKRSDYRVM 112
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
V L S SWQDLKD MR+ G+VC+ D ++ G+ ++ + DMK A+ KLD++E
Sbjct: 113 VTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEF 171
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 99/179 (55%), Gaps = 19/179 (10%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYEL 57
G +Y+G LP +RER+++ YGRI ++ LK GF FVEFED DA+DA+Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGR 65
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
+G + G R+ VE+A G RG S+ G + G RSD+R++
Sbjct: 66 DGYNFDGHRLRVELA--------HGGRGPSSFDRSSSYSSAG-----QRGASKRSDYRVM 112
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
V L S SWQDLKD MR+ G+VC+ D ++ G+ ++ + DMK A+ KLD++E
Sbjct: 113 VTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEF 171
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 107/193 (55%), Gaps = 30/193 (15%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVY 55
M GT+VY+G LP +R R++E YGRIRD+ +K F FV+FED RDA+DA+
Sbjct: 528 MSGTRVYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDPRDAEDAIR 587
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
+G G R+ VE A G R E RG G Y P RG G D+
Sbjct: 588 GRDGYDYDGARLRVEPANGGRR--ESAPRGSGRY--PRNIRGTG-------------DYT 630
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
+ + NL RVSWQDLKDFMR+ G+V + + R G+VE+ + DMK A++KLD++E
Sbjct: 631 VEISNLPPRVSWQDLKDFMRKAGDVVFTEVDG--RGGGIVEYSNKRDMKYAVEKLDDSEF 688
Query: 176 NGR------RIRL 182
GR R+RL
Sbjct: 689 RGRSENSYVRVRL 701
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 18/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + G G RSD R++V
Sbjct: 72 NFDGYRLRVELAHG-----GRGQSYSYDRSSSYSSACRG-------GVSRRSDFRVMVTG 119
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD+++
Sbjct: 120 LPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQF 175
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 18/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + G G RSD R++V
Sbjct: 69 NFDGYRLRVELAHG-----GRGQSYSYDRSSSYSSARRG-------GVSRRSDFRVMVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD+++
Sbjct: 117 LPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQF 172
>gi|302690366|ref|XP_003034862.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
gi|300108558|gb|EFI99959.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
Length = 292
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 101/191 (52%), Gaps = 20/191 (10%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+G ++Y+G LP D++K YG + D + GFGF+E+E +DA+DAV E+NGK+
Sbjct: 7 MGRRLYLGKLPPDTAPEDVKKTFGAYGTVVDCRVMTGFGFIEYESSKDAEDAVNEMNGKT 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR--SDHRLIVE 119
G + VE A+ + R R R P ++RD YG P R R++V
Sbjct: 67 FNGNSIAVEFAR-----ENRPR------REP-------YERDREYGAPRRRPGGFRVLVT 108
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
+S SWQDLKDF R+ G V +AD + +GV+E+ S D A+ LD +L G
Sbjct: 109 GVSRDTSWQDLKDFGREAGSVTFADIDRDVPGQGVLEYMSRDDADHAVRYLDRRDLRGHP 168
Query: 180 IRLIEDKPRGG 190
+ + D RGG
Sbjct: 169 VNVTLDDSRGG 179
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 99/176 (56%), Gaps = 16/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG I D+ LK G+ F+EFED RDA+DA+ +G
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G R Q Y SY + R G G RS++R++V
Sbjct: 69 NFDGNRLRVELAHG-GRGQSSTNDRYSSYSSAGGRSG---------GVSRRSEYRVLVSG 118
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ + G+V++ + DMK A+ KLD++E
Sbjct: 119 LPSSASWQDLKDHMRRAGDVCFSQVFRDSSGTTGIVDYTNYDDMKYAIRKLDDSEF 174
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 18/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + G G RSD R++V
Sbjct: 69 NFDGYRLRVELAHG-----GRGQSYSYDRSSSYSSACRG-------GVSRRSDFRVMVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD+++
Sbjct: 117 LPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQF 172
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 97/186 (52%), Gaps = 39/186 (20%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E YG I D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRG----------YGSYRAPPPRRGWGHDRDDRYGPPT 110
G R+ VEIA G GRRG Y RA P
Sbjct: 69 DFDGCRLRVEIAHG-------GRRGSSSVDRYSSSYTGSRA----------------PSR 105
Query: 111 RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDK 169
RS +R++V L SWQDLKD MR+ G+VC+++ + R R GVV++ + DMK A+ K
Sbjct: 106 RSAYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFRDRGRMSGVVDYSNYDDMKYAIRK 165
Query: 170 LDNAEL 175
LD+ E
Sbjct: 166 LDDTEF 171
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 30/184 (16%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNG 59
K+++G LP + E +LEK +G+I +VILK F F+E+ED RDA+DAV +++G
Sbjct: 26 KIFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHG 85
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
K L G + VEI+ R G RD+++G + R+ +
Sbjct: 86 KELHGAEIRVEIS----------------------RNGPKASRDEKFGGRHHGTQFRVEL 123
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
N+ VSWQDLKDF+R G V +AD +R GV F + +M++A+ KL +A+LNG
Sbjct: 124 SNIPRSVSWQDLKDFLRIGGVVVHADVDRR--GNGVASFTNQQEMERAIRKLKDAKLNGE 181
Query: 179 RIRL 182
RI++
Sbjct: 182 RIKI 185
>gi|171682128|ref|XP_001906007.1| hypothetical protein [Podospora anserina S mat+]
gi|170941023|emb|CAP66673.1| unnamed protein product [Podospora anserina S mat+]
Length = 319
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 113/208 (54%), Gaps = 30/208 (14%)
Query: 3 GTKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 6 ATRLYLGNLPRNATKADIEAHFSTHGTGDIAEIKLMNGFGFIEYKDPMDARDVV--PDGS 63
Query: 61 SLLGERVTVEIAKGIDRSQERGRRG------YGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
+ LGER+TV+ A+G +R +E G + + R+ PR P R+ H
Sbjct: 64 TFLGERLTVQFARG-NRHRENNGGGGGGGGGFNNDRSSAPR-------------PRRTPH 109
Query: 115 RLIVENLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
RL + L SWQDLKDF R G +V Y++ + +EG VEFE+++D++ A++KL+
Sbjct: 110 RLQISGLPPDTSWQDLKDFARTPGLDVVYSETGRNGSSEGFVEFETAADLRTAVEKLNER 169
Query: 174 ELNGRRIRLI----EDKPRGGGRGRSRS 197
+ G R+ D PR G RGRS S
Sbjct: 170 DFKGVRVTCTANTQADIPR-GDRGRSMS 196
>gi|346326093|gb|EGX95689.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 332
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 20/186 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I +V L +GFGF+E++D DA D V +G
Sbjct: 8 TRLYLGNLPPNATKADIEAHFATHGTGEITEVKLMHGFGFIEYKDPMDARDVV--PDGSD 65
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
G R+TV+ A+G R +E PP G G +R P P R+ HR+ +
Sbjct: 66 FKGTRLTVQFARG-PRPRE------------PPGYGAGGAHHERAAPRPRRTIHRMTITG 112
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKDF RQ G +V Y++ R G VE+E+++D++ A++KLD E G+
Sbjct: 113 LPNETSWQDLKDFARQAGPDVVYSET-ARDSGRGFVEYENANDLRTAVEKLDGFEFKGKV 171
Query: 180 IRLIED 185
++ I D
Sbjct: 172 VQCISD 177
>gi|225711430|gb|ACO11561.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 186
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 101/186 (54%), Gaps = 18/186 (9%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G +VY+GGLP V ++ + Y DV+LK F FVEF+ RDAD A+ L+G
Sbjct: 16 GCRVYVGGLPSDVTTSEVGEIFAKYRNRFDVVLKTRFAFVEFDHNRDADHALERLDGTLF 75
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
G+R+ VEIA+G + + RG G R P + W +YG P + ++LI
Sbjct: 76 RGQRIVVEIARGPKTADKYLFRG-GMDRE-PTQATWVQ----KYGAPEITQYKLI----- 124
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
DLK MR+ G V YA AH+ + EG+V FE+ DM +A+D D+ EL GRR+ +
Sbjct: 125 ------DLKALMRKAGRVTYAQAHRNNLREGIVCFENKHDMLRAIDIFDDYELCGRRLDI 178
Query: 183 -IEDKP 187
I KP
Sbjct: 179 EICTKP 184
>gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio]
gi|182889684|gb|AAI65510.1| Sfrs1 protein [Danio rerio]
Length = 258
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 95/178 (53%), Gaps = 19/178 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGQPFAFVEFEDPRDAEDAVYGRD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE + G G G RYGPP+R S++R+I
Sbjct: 75 GYDYDGYRLRVEFPRSGRGGGRGGGGGGGV-----------GAPRGRYGPPSRRSEYRVI 123
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN +
Sbjct: 124 VSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDNTKF 179
>gi|326482144|gb|EGE06154.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 304
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 21/185 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E+ G G+I ++ L GFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVNKQDIEEHFGSHGTGKITEIKLMQGFGFIEYEDAMDAKDVVPAFHGTD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
GER+TV+ A+G R + + PP R P R+ +R+ + L
Sbjct: 67 FKGERLTVQFARGPRRRE--------PFPGPPERSAAPR--------PRRTIYRMQITGL 110
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ R +G VEFE+ +D++ A++KLD + G R+
Sbjct: 111 PE-TSWQDLKDFARQSGLDVVYSETRDRD-GKGFVEFENGNDLRTAVEKLDGTDFKGSRV 168
Query: 181 RLIED 185
D
Sbjct: 169 TCTAD 173
>gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays]
gi|224035263|gb|ACN36707.1| unknown [Zea mays]
gi|413944990|gb|AFW77639.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 284
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 102/187 (54%), Gaps = 27/187 (14%)
Query: 3 GTKVYIGGLPYGVRERDLEK-FVKG-------YGRIRDVILK-----NGFGFVEFEDYRD 49
G +Y+G LP +RER+++ F KG YGRI ++ LK GF FVEFED RD
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKGRQCGLRMYGRIVEIDLKIPPRPPGFAFVEFEDARD 65
Query: 50 ADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPP 109
A+DA+Y +G + G R+ VE+A G RG S+ G G
Sbjct: 66 AEDAIYGRDGYNFDGHRLRVELA--------HGGRGTSSFDRSSSYSSAGQR-----GAS 112
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALD 168
RSD+R++V L S SWQDLKD MR+ G+VC+ D ++ G+ ++ + DMK A+
Sbjct: 113 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIR 172
Query: 169 KLDNAEL 175
KLD++E
Sbjct: 173 KLDDSEF 179
>gi|159479816|ref|XP_001697982.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158273781|gb|EDO99567.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 320
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 103/194 (53%), Gaps = 33/194 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
+++G LPY VRE++L++ +GRIR + +K GF FVEFED R A++A N
Sbjct: 37 IFVGNLPYDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFVEFEDPRSAEEAARRRNNY 96
Query: 61 SLLGERVTVEIAKGIDR--SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G R+ VEIA+G + +Q+ R GY P R G RL V
Sbjct: 97 EFAGMRMRVEIARGGEAAGAQQPLRIGYR-----PIRNTMG--------------FRLYV 137
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE--GVVEFESSSDMKKALDKLDNAEL- 175
+NL SWQDLKDF+R+V + Y + K +R+ GVVEFES DMK + KLD+ E
Sbjct: 138 KNLPRSASWQDLKDFVRRVCKPLYTEVFKDNRDNVVGVVEFESKEDMKATVRKLDDTEFA 197
Query: 176 ----NGRRIRLIED 185
G +RL ED
Sbjct: 198 NPFDKGHYVRLTED 211
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE + + G G G RYGPP+R S++R++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGA-----------PRGRYGPPSRRSENRVV 124
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTKF 180
>gi|345571438|gb|EGX54252.1| hypothetical protein AOL_s00004g285 [Arthrobotrys oligospora ATCC
24927]
Length = 377
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 19/201 (9%)
Query: 6 VYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
VY+ ++D+E F G+G I+++ L NGFGF+E+ + DA D V +GK +
Sbjct: 26 VYLCPFVSTATKKDVEDFFVKHGHGTIQEIKLMNGFGFIEYSNPSDARDIVPIFHGKEFM 85
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R+TV+ A+G P R + DR P R+ +R+ + L +
Sbjct: 86 DSRLTVQFARG----------------PRPTRNDFNGPSGDRTPRPRRTPYRMNISGLPT 129
Query: 124 RVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SWQDLKDF R+ G +V +++ + G+VEFE++ D++ A++KLDN + G R+
Sbjct: 130 DTSWQDLKDFARKSGVDVVFSEVSRNRDGSGIVEFETADDLRIAINKLDNYDFKGGRVSC 189
Query: 183 IEDKPRGGGRGRSRSSSSRSR 203
D+ RGRSRS R
Sbjct: 190 TSDQQARNSRGRSRSPPPAGR 210
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 95/178 (53%), Gaps = 19/178 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE + G G G RYGPP+R S++R+I
Sbjct: 75 GYDYDGYRLRVEFPRSGRGGGRGGGGGGGV-----------GAPRGRYGPPSRRSEYRVI 123
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN +
Sbjct: 124 VSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDNTKF 179
>gi|444723179|gb|ELW63840.1| Serine/arginine-rich splicing factor 9 [Tupaia chinensis]
Length = 235
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 91/176 (51%), Gaps = 25/176 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 29 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNQHGLVPFAFVRFEDPRDAEDAIYGRNG 88
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R PP R RSD R++V
Sbjct: 89 YDYGQCRLRVEFP----RTYGGRGGWPRGGRNGPPTR--------------RSDFRVLVS 130
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 131 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 184
>gi|317143798|ref|XP_003189536.1| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
Length = 299
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 21/185 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E+ G G+I ++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMNGFGFIEYEDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
GER+TV+ A+G R + ++ P R P R+ +R++V L
Sbjct: 67 FKGERLTVQFARGPRRKE--------NFPGPMDRPNMPR--------PRRTVYRMMVSGL 110
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF R G +V Y++ R G VEFE+++D+K A++KLD + G R+
Sbjct: 111 PE-TSWQDLKDFARGAGLDVVYSET-GREPGRGFVEFETANDLKTAIEKLDGRDFKGSRV 168
Query: 181 RLIED 185
+ D
Sbjct: 169 SCVAD 173
>gi|313222821|emb|CBY41772.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 95/156 (60%), Gaps = 17/156 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
V+IG L R D+EKF KGYG +RD+ LK G+GFV+F+D DA DAV +L+GK + G+
Sbjct: 170 VFIGNLSDHARHEDIEKFFKGYGSLRDISLKGGYGFVQFKDKYDAKDAVQDLDGKEICGQ 229
Query: 66 RVTVEIAKGIDRSQERGRRGYGSYR-------------APPPRRGWGHDRDD--RYGPPT 110
+V +E++ G RGR Y R + PRR + ++R +YG P
Sbjct: 230 KVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSF-YERTAYRKYGAPK 288
Query: 111 RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAH 146
++ + + +ENLS RVSWQDLKDF R+VGEV Y D H
Sbjct: 289 KTKYAIEIENLSERVSWQDLKDFFRRVGEVSY-DNH 323
>gi|302894677|ref|XP_003046219.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
gi|256727146|gb|EEU40506.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 24/183 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I +V L NGFGF+E++D DA D V + G +
Sbjct: 8 TRLYLGNLPRNATKSDVEAHFATHGTGEITEVKLMNGFGFIEYKDPMDAQDVVPD--GSN 65
Query: 62 LLGERVTVEIAKGIDRSQERGRRG-YGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+GER+TV+ A G R R G +G++ PR P R+ HR+ +
Sbjct: 66 FMGERLTVQFAHG-----PRHREGGFGNHERAAPR-------------PRRTPHRMQITG 107
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKDF RQ +V Y++ + G VEFE+++D++ A++KLD E G+R
Sbjct: 108 LPNDTSWQDLKDFARQSSLDVVYSETGRDSNGRGFVEFETAADLRTAVEKLDGREFKGQR 167
Query: 180 IRL 182
L
Sbjct: 168 NML 170
>gi|303317336|ref|XP_003068670.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108351|gb|EER26525.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 300
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 22/185 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E+ G G+I D+ L +GFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKLMSGFGFIEYEDALDARDVV--PDGTD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
G R+TV+ A+G R +E AP PRR + +R+ + L
Sbjct: 65 FKGSRLTVQFARGP-RHKETFSGPSDRSNAPRPRR---------------TPYRMQISGL 108
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ + H G VEFE+ +D+K A++KLD E G R+
Sbjct: 109 PE-TSWQDLKDFARQSGLDVVYSETLRDHEGRGFVEFETGADLKTAIEKLDGREFKGSRV 167
Query: 181 RLIED 185
+D
Sbjct: 168 TCTQD 172
>gi|52345494|ref|NP_001004795.1| serine/arginine-rich splicing factor 9 [Xenopus (Silurana)
tropicalis]
gi|49257722|gb|AAH74531.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
gi|89272901|emb|CAJ83204.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
Length = 225
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 92/178 (51%), Gaps = 25/178 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-------GFGFVEFEDYRDADDAVYEL 57
++Y+G LP +RE++LE YGRIR + LKN F F+ F+D RDA+DAV+
Sbjct: 17 RIYVGNLPADIREKELEDLFDRYGRIRTIELKNRGGSSAAPFAFISFQDPRDAEDAVFAR 76
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
NG R+ VE + S G PP RR S++R+I
Sbjct: 77 NGYEFGSCRLRVEFPRSFRGSGGGYGGSRGR-NGPPSRR---------------SEYRVI 120
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD HK G+VEF DM+ AL KLD+ +
Sbjct: 121 VSGLPPSGSWQDLKDHMREAGDVCYADVHK--DGMGIVEFIRKEDMEYALRKLDDTKF 176
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 101/179 (56%), Gaps = 13/179 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEF+D RDA+DAV+ +G
Sbjct: 10 CRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDG 69
Query: 60 KSLLGERVTVEIAKGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDDRY-GPPTR-SDHRL 116
G R+ VE +G S RG RG G R G G + R GPP R S +R+
Sbjct: 70 YDYDGYRLRVEFPRGGGPSNNFRGGRGAGD----SGRGGRGEMSNSRGRGPPARRSQYRV 125
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
+V L SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 126 LVSGLPPSGSWQDLKDHMREAGDVCFADVYK--DGTGVVEFLRHDDMKYAVKKLDDSRF 182
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 111 RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALDK 169
R++ R+ V NL + +D++D + G+V + D ++R VEF+ D + A+
Sbjct: 7 RNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHA 66
Query: 170 LDNAELNGRRIRLIEDKPRGGGR------GRSRSSSSRSRSKSRSRSRSSKSRSPRSR 221
D + +G R+R+ + PRGGG GR S R R +S+ R P +R
Sbjct: 67 RDGYDYDGYRLRV--EFPRGGGPSNNFRGGRGAGDSGRG---GRGEMSNSRGRGPPAR 119
>gi|238487096|ref|XP_002374786.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
gi|317143800|ref|XP_001819713.2| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
gi|220699665|gb|EED56004.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
Length = 300
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 104/185 (56%), Gaps = 21/185 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E+ G G+I ++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMNGFGFIEYEDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
GER+TV+ A+G R + ++ P DR + P R+ +R++V L
Sbjct: 67 FKGERLTVQFARGPRRKE--------NFPGP-------MDRPNMPR-PRRTVYRMMVSGL 110
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF R G +V Y++ R G VEFE+++D+K A++KLD + G R+
Sbjct: 111 PE-TSWQDLKDFARGAGLDVVYSET-GREPGRGFVEFETANDLKTAIEKLDGRDFKGSRV 168
Query: 181 RLIED 185
+ D
Sbjct: 169 SCVAD 173
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 99/187 (52%), Gaps = 34/187 (18%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG-----------P 108
G R+ VE +G G GSYR G++R+DR P
Sbjct: 67 YDYDGYRLRVEFPRG---------GGPGSYR--------GNNRNDRSRDGGGRMGGRGPP 109
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALD 168
RS +R++V L SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+
Sbjct: 110 AKRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYK--DGSGVVEFLRHEDMKYAIK 167
Query: 169 KLDNAEL 175
KLD++
Sbjct: 168 KLDDSRF 174
>gi|307078155|ref|NP_001182495.1| splicing factor, arginine/serine-rich 9 [Sus scrofa]
Length = 221
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 91/176 (51%), Gaps = 25/176 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRNGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 117 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 170
>gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio rerio]
Length = 188
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 95/178 (53%), Gaps = 19/178 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE + G G G RYGPP+R S++R+I
Sbjct: 75 GYDYDGYRLRVEFPRSGRGGGRGGGGGGGV-----------GAPRGRYGPPSRRSEYRVI 123
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN +
Sbjct: 124 VSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDNTKF 179
>gi|348585449|ref|XP_003478484.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Cavia
porcellus]
gi|351702214|gb|EHB05133.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 221
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 91/176 (51%), Gaps = 25/176 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRTGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 117 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 170
>gi|417397369|gb|JAA45718.1| Putative splicing factor arginine/serine-rich 9-like protein
[Desmodus rotundus]
gi|431914272|gb|ELK15530.1| Splicing factor, arginine/serine-rich 9 [Pteropus alecto]
Length = 221
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 91/176 (51%), Gaps = 25/176 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRNGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 117 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 170
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 105/195 (53%), Gaps = 9/195 (4%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG + + LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G RS R Y R G GP RS++R++V
Sbjct: 69 DFDGHRLRVELAHGGRRSSHDARGSYSGGGRG--GRDGGDGGVRGRGPSRRSEYRVVVSG 126
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL-NGR 178
L S SWQDLKD MR+ GEVC++ + R G+V++ S DMK A+ KLD+ E N
Sbjct: 127 LPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKKLDDTEFRNAF 186
Query: 179 RIRLIEDKPRGGGRG 193
+ + +GG RG
Sbjct: 187 SHGYVRNMIQGGIRG 201
>gi|389640645|ref|XP_003717955.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
gi|351640508|gb|EHA48371.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
Length = 330
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 109/202 (53%), Gaps = 15/202 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+ G G+I ++ L NGFGF+E++D DA D V +G +
Sbjct: 7 TRLYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMNGFGFIEYDDPLDARDVV--PDGST 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G R R G G G +R GP P R+ R+ +
Sbjct: 65 FMGERLTVQFARGT-----RNREGGSGGGGGGGGGGGGGYGGERSGPRPRRTAFRMQISG 119
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKDF RQ +V Y++ + + EG VEFE+++D+ A++ LD E +
Sbjct: 120 LPVDTSWQDLKDFARQSQLDVVYSETGRNNNGEGFVEFETAADLASAVEALDGKEFKDKI 179
Query: 180 IRLI----EDKPRGGGRGRSRS 197
+R + D P GRGRSRS
Sbjct: 180 VRCVANTQPDPPPRDGRGRSRS 201
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 99/187 (52%), Gaps = 34/187 (18%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG-----------P 108
G R+ VE +G G GSYR G++R+DR P
Sbjct: 67 YDYDGYRLRVEFPRG---------GGPGSYR--------GNNRNDRSRDGGGRMGGRGPP 109
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALD 168
RS +R++V L SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+
Sbjct: 110 AKRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYK--DGSGVVEFLRHEDMKYAIK 167
Query: 169 KLDNAEL 175
KLD++
Sbjct: 168 KLDDSRF 174
>gi|340516476|gb|EGR46724.1| predicted protein [Trichoderma reesei QM6a]
Length = 311
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 109/200 (54%), Gaps = 22/200 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I +V L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRHATKSDVEAHFATHGTGEITEVKLMNGFGFIEYKDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+TV+ A+G R R G G GH+R R+ HR+ + L
Sbjct: 67 FMGERLTVQFARGT-----RHREG-----------GMGHERAPPRP--RRTPHRMQITGL 108
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+ SWQDLKDF RQ +V Y++ + G VEFE+++D++ A++KLD E G R+
Sbjct: 109 PNDTSWQDLKDFARQSSLDVVYSETGRDSNGRGFVEFETAADLRTAIEKLDGREFKGSRV 168
Query: 181 RLIED-KPRGGGRGRSRSSS 199
+ I D +P R R+RS S
Sbjct: 169 QCIVDLQPDMPPRDRARSRS 188
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 99/187 (52%), Gaps = 34/187 (18%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG-----------P 108
G R+ VE +G G GSYR G++R+DR P
Sbjct: 67 YDYDGYRLRVEFPRG---------GGPGSYR--------GNNRNDRSRDGGGRMGGRGPP 109
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALD 168
RS +R++V L SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+
Sbjct: 110 AKRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYK--DGSGVVEFLRHEDMKYAIK 167
Query: 169 KLDNAEL 175
KLD++
Sbjct: 168 KLDDSRF 174
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 97/176 (55%), Gaps = 13/176 (7%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VRE ++E YGRI DV LK G+ F+EFED RDA+DA+ +G
Sbjct: 9 LYVGNLPGDVREGEIEDLFYKYGRIIDVDLKVPPRPPGYCFIEFEDARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE A G GRR S P R R G +D+R++V
Sbjct: 69 NFDGHRIRVEFAHG-------GRRTSSSLGRPSSYSSIAGGRGGRGGVTRHTDYRVLVTG 121
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VCYA+ + + G V++ + DMK A+ KLD++E
Sbjct: 122 LPSSASWQDLKDHMRRAGDVCYAEVFRDSNGTRGTVDYTNLEDMKYAIRKLDDSEF 177
>gi|4506903|ref|NP_003760.1| serine/arginine-rich splicing factor 9 [Homo sapiens]
gi|114647286|ref|XP_001160785.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Pan
troglodytes]
gi|297693182|ref|XP_002823915.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pongo abelii]
gi|332262536|ref|XP_003280317.1| PREDICTED: serine/arginine-rich splicing factor 9 [Nomascus
leucogenys]
gi|402887863|ref|XP_003907300.1| PREDICTED: serine/arginine-rich splicing factor 9 [Papio anubis]
gi|410047369|ref|XP_003952371.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|3929377|sp|Q13242.1|SRSF9_HUMAN RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Pre-mRNA-splicing factor SRp30C; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|1049078|gb|AAA93069.1| SRp30c [Homo sapiens]
gi|4099429|gb|AAD00626.1| splicing factor SRp30c [Homo sapiens]
gi|62739648|gb|AAH93973.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|62740064|gb|AAH93971.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|119618600|gb|EAW98194.1| splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|261861074|dbj|BAI47059.1| splicing factor, arginine/serine-rich 9 [synthetic construct]
gi|380817540|gb|AFE80644.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|383422449|gb|AFH34438.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|410227624|gb|JAA11031.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227626|gb|JAA11032.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227628|gb|JAA11033.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263740|gb|JAA19836.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263742|gb|JAA19837.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263744|gb|JAA19838.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305344|gb|JAA31272.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305346|gb|JAA31273.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305348|gb|JAA31274.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340983|gb|JAA39438.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340985|gb|JAA39439.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
Length = 221
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 91/176 (51%), Gaps = 25/176 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRNGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 117 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGVGMVEYLRKEDMEYALRKLDDTKF 170
>gi|226496385|ref|NP_001151386.1| LOC100285019 [Zea mays]
gi|195646352|gb|ACG42644.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 275
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 99/179 (55%), Gaps = 20/179 (11%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYEL 57
G +Y+G LP +RER+++ YGRI ++ LK GF FVEFED DA+DA+Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFED-ADAEDAIYGR 64
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
+G + G R+ VE+A G RG S+ G + G RSD+R++
Sbjct: 65 DGYNFDGHRLRVELA--------HGGRGTSSFDRSSSYSSAG-----QRGASKRSDYRVM 111
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
V L S SWQDLKD MR+ G+VC+ D ++ G+ ++ + DMK A+ KLD++E
Sbjct: 112 VTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEF 170
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis gaditana
CCMP526]
Length = 277
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 96/190 (50%), Gaps = 32/190 (16%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYE 56
+ ++Y+G LP VRERDL+ YGRIR + +K + FV FED RDA DAV+
Sbjct: 1 MSCRIYVGNLPMDVRERDLDDLFYKYGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHY 60
Query: 57 LNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRL 116
+ G R+ VE+A R R RG+G R R+D RL
Sbjct: 61 RDNYDFDGGRIRVELANETPR--RRDDRGFGGGR-------------------NRTDFRL 99
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE-- 174
V +L R SWQDLKD+ + VG+V YAD + EGVVEF + DM A KLD +
Sbjct: 100 EVSDLPDRTSWQDLKDYFKPVGDVLYADVSR--NGEGVVEFATKEDMFAAKRKLDGSTFR 157
Query: 175 --LNGRRIRL 182
+ R IR+
Sbjct: 158 NPFDSREIRV 167
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG + + LK G+ FVEF+D RDA+DA++ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G RS + R + G G GP RS+ R++V
Sbjct: 69 DFDGHRLRVELAHGGRRSSDDTRGSFNGGGR---GGGRGRGDGGSRGPSRRSEFRVLVTG 125
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ ++ R GVV++ DMK AL KLD+ E
Sbjct: 126 LPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEF 181
>gi|339233572|ref|XP_003381903.1| putative RNA recognition [Trichinella spiralis]
gi|316979226|gb|EFV62043.1| putative RNA recognition [Trichinella spiralis]
Length = 351
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 71/108 (65%), Gaps = 17/108 (15%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+GT+VY+G +PY ERD+EKF +G+GRIR++ LKNG+GFVEFE DADDA YELNG+
Sbjct: 47 MGTRVYVGRIPYRATERDIEKFFRGFGRIREIFLKNGYGFVEFEHTEDADDACYELNGRE 106
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYG---SYRAPPPRRGWGHDRDDRY 106
+ GER+ VEIA+G GR YG SYR R DRY
Sbjct: 107 MFGERLIVEIARG----TPHGRDRYGWRQSYRV----------RSDRY 140
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 97/188 (51%), Gaps = 36/188 (19%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG------------ 107
G R+ VE +G G GSYR +R+DR
Sbjct: 67 YDYDGYRLRVEFPRG---------GGPGSYRG---------NRNDRNNGRDGGRMGGRGP 108
Query: 108 PPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKAL 167
P RS +R++V L SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+
Sbjct: 109 PAKRSQYRVMVTGLPPSGSWQDLKDHMREAGDVCFADTYK--DGSGVVEFLRHEDMKYAI 166
Query: 168 DKLDNAEL 175
KLD++
Sbjct: 167 KKLDDSRF 174
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 99/179 (55%), Gaps = 19/179 (10%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYEL 57
G +Y+G LP +RER+++ YGRI ++ LK GF FVEFED DA+DA+Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGR 65
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
+G + G R+ VE+A G RG S+ G + G RSD+R++
Sbjct: 66 DGYNFDGHRLRVELA--------HGGRGPSSFDRSSSYSSAG-----QRGASKRSDYRVM 112
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
V L S SWQDLKD MR+ G+VC+ D ++ G+ ++ + DMK A+ KLD++E
Sbjct: 113 VTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEF 171
>gi|324536071|gb|ADY49444.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 92
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 68/94 (72%), Gaps = 8/94 (8%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+VYIG L Y ERD+E +GYGRIRD++LKNGFGFVEF+D RDADDAVYELNGK L
Sbjct: 3 ARVYIGRLSYRASERDIEHLFRGYGRIRDIVLKNGFGFVEFDDPRDADDAVYELNGKDLC 62
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSY-RAPPPRR 96
GER+ +E ++ RG RG G Y R PPPRR
Sbjct: 63 GERIILEFSR-------RGPRGRGMYDRYPPPRR 89
>gi|350633625|gb|EHA21990.1| hypothetical protein ASPNIDRAFT_56436 [Aspergillus niger ATCC 1015]
Length = 299
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 23/185 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E+ G G+I ++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMNGFGFIEYEDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
GER+TV+ A+G R + ++ P R P R+ R++V L
Sbjct: 65 FKGERLTVQFARGPRRKE--------NFPGPMDRPNMPR--------PRRTIFRMMVSGL 108
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ R G VEFE+++D+K A++KLD E G R+
Sbjct: 109 PE-TSWQDLKDFARQSGLDVVYSET-GRELGRGFVEFETANDLKTAIEKLDGREFKGSRV 166
Query: 181 RLIED 185
I D
Sbjct: 167 TCIAD 171
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 96/177 (54%), Gaps = 16/177 (9%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT-RSDHRLIV 118
G R+ VE +G G GSYR R R GPP RS +R++V
Sbjct: 67 YDYDGYRLRVEFPRG---------GGPGSYRGNRNDRSRDGGRMGGRGPPAKRSQYRVMV 117
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 118 TGLPGSGSWQDLKDHMREAGDVCFADTYKD--GSGVVEFLRHEDMKYAIKKLDDSRF 172
>gi|358398894|gb|EHK48245.1| hypothetical protein TRIATDRAFT_298403 [Trichoderma atroviride IMI
206040]
Length = 312
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 25/205 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I +V L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNATKADVEAHFATHGTGEITEVKLMNGFGFIEYKDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+TV+ A+G R R G G GH+R R+ HR+ + L
Sbjct: 67 FMGERLTVQFARGA-----RHREG-----------GMGHERAPPRP--RRTPHRMQITGL 108
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+ SWQDLKDF RQ +V Y++ + G VEFE+++D++ A++KLD E G R+
Sbjct: 109 PNDTSWQDLKDFARQSSLDVVYSETGRDSNGRGFVEFETAADLRTAVEKLDGREFKGARV 168
Query: 181 RLI----EDKPRGGGRGRSRSSSSR 201
+ + D P R RSRS R
Sbjct: 169 QCLVDTQPDMPPRDPRARSRSPGRR 193
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 53/122 (43%), Gaps = 25/122 (20%)
Query: 8 IGGLPYGVRERDLEKFVKGYGRIRDVIL------KNGFGFVEFEDYRDADDAVYELNGKS 61
I GLP +DL+ F + DV+ NG GFVEFE D AV +L+G+
Sbjct: 105 ITGLPNDTSWQDLKDFAR--QSSLDVVYSETGRDSNGRGFVEFETAADLRTAVEKLDGRE 162
Query: 62 LLGERVTVEIAKGID--------RSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSD 113
G RV + D RS+ GRR Y PPP+ D DR G P R
Sbjct: 163 FKGARVQCLVDTQPDMPPRDPRARSRSPGRRPY-----PPPQ----FDNYDRRGGPHRGY 213
Query: 114 HR 115
+R
Sbjct: 214 NR 215
>gi|71033489|ref|XP_766386.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353343|gb|EAN34103.1| hypothetical protein TP01_0865 [Theileria parva]
Length = 343
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 105/192 (54%), Gaps = 25/192 (13%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-------FGFVEFEDYRDADDAVYELN 58
V++G LP V ERD++ +G I+D+ +K+G + F+EF R A+DAV +
Sbjct: 15 VFVGNLPDRVDERDIQDLFDKFGEIKDIDIKHGKTSNYTSYAFIEFASVRSAEDAVDSRD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G R+ VE A ++R RR Y SY P R DR +RY PPTR+D+RL++
Sbjct: 75 GYEYDRYRLRVEFA-----GEKRPRR-YPSYERPRDR-----DRSNRYPPPTRTDYRLVI 123
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL--- 175
NL WQ LKD MR+ G V Y + +G V+F SDMK A+ KLD +EL
Sbjct: 124 SNLPHGCRWQHLKDHMRKAGPVGYVNI---VHGKGFVDFLHKSDMKYAIRKLDGSELSTP 180
Query: 176 -NGRRIRLIEDK 186
+ RIR+ +D+
Sbjct: 181 DDSCRIRVKKDE 192
>gi|121705498|ref|XP_001271012.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
gi|119399158|gb|EAW09586.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
Length = 296
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 23/185 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E+ G G+I ++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQDIEEHFSSHGSGKITEIKLMNGFGFIEYEDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
GER+TV+ A+G R + ++ P R P R+ R+++ L
Sbjct: 65 FKGERLTVQFARGPRRKE--------NFPGPMDRPNMPR--------PRRTVFRMLISGL 108
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ R G VEFE+++D+K A+DKLD + G R+
Sbjct: 109 PE-TSWQDLKDFARQSGLDVVYSET-GREPGRGFVEFETAADLKTAVDKLDGRDFKGSRV 166
Query: 181 RLIED 185
I D
Sbjct: 167 SCIAD 171
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 97/177 (54%), Gaps = 7/177 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG + + LK G+ FVEF+D RDA+DA++ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
G R+ VE+A G RS + R + R D P+R S+ R++V
Sbjct: 69 DFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVT 128
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ ++ R GVV++ DMK AL KLD+ E
Sbjct: 129 GLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEF 185
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG + + LK G+ FVEF+D RDA+DA++ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G RS + R + G G GP RS+ R++V
Sbjct: 69 DFDGHRLRVELAHGGRRSSDDTRGSFNGGGR---GGGRGRGDGGSRGPSRRSEFRVLVTG 125
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ ++ R GVV++ DMK AL KLD+ E
Sbjct: 126 LPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEF 181
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 135/270 (50%), Gaps = 22/270 (8%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG + + LK G+ FVEF+D RDA+DA++ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G RS + R + G G GP RS+ R++V
Sbjct: 69 DFDGHRLRVELAHGGRRSSDDTRGSFNGGGR---GGGRGRGDGGSRGPSRRSEFRVLVTG 125
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL---- 175
L S SWQDLKD MR+ G+VC++ ++ R GVV++ DMK AL KLD+ E
Sbjct: 126 LPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAF 185
Query: 176 -NGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKS--KS 232
NG +R+ E R R SR S S+SRS KS +S
Sbjct: 186 SNG-YVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRS 244
Query: 233 KAKSVSRSPSPSKTRKRSRSRSDSRARKVS 262
AKS SRSP P RS+SRS S R ++
Sbjct: 245 PAKSTSRSPGP-----RSKSRSPSPRRWIT 269
>gi|342876767|gb|EGU78325.1| hypothetical protein FOXB_11186 [Fusarium oxysporum Fo5176]
Length = 1835
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 92/162 (56%), Gaps = 20/162 (12%)
Query: 26 GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRR- 84
G G I +V L NGFGF+E++D DA D V +G +GER+TV+ A+G R R
Sbjct: 1556 GTGEITEVKLMNGFGFIEYKDPMDARDVVPAFHGSDFMGERLTVQFARG-----SRHREG 1610
Query: 85 GYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYA 143
G+G++ PR P R+ HR+ + L + SWQDLKDF RQ +V Y+
Sbjct: 1611 GFGNHERTAPR-------------PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYS 1657
Query: 144 DAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
+ + G VEFE+++D++ A++KLD E G+R++ + D
Sbjct: 1658 ETGRDSNGRGFVEFETAADLRTAVEKLDGREFKGQRVQCVAD 1699
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 97/178 (54%), Gaps = 8/178 (4%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE + G G G G G RYGPP+R S++R+I
Sbjct: 75 GYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVI 134
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN +
Sbjct: 135 VSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDNTKF 190
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 97/177 (54%), Gaps = 7/177 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG + + LK G+ FVEF+D RDA+DA++ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
G R+ VE+A G RS + R + R D P+R S+ R++V
Sbjct: 69 DFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVT 128
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ ++ R GVV++ DMK AL KLD+ E
Sbjct: 129 GLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEF 185
>gi|384498124|gb|EIE88615.1| hypothetical protein RO3G_13326 [Rhizopus delemar RA 99-880]
Length = 429
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 94/182 (51%), Gaps = 43/182 (23%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G +VY+G LP V + ++E K Y + +V LK FGFVEF++ DADDA+++L+G +
Sbjct: 185 GNRVYLGNLPVNVSKSEIESVFKNYNPV-EVTLKERFGFVEFDNKVDADDAIHDLHGTKV 243
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
G R R Y R++++NL
Sbjct: 244 SG--------------SSREERSY----------------------------RVVIKNLP 261
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
R +WQD+KDFMR+ G V +AD K EGVVEF DMK AL +LD+ +LNG+R+RL
Sbjct: 262 PRTTWQDVKDFMRKAGRVVFADVLKDCDGEGVVEFAQYDDMKYALRELDDKKLNGQRVRL 321
Query: 183 IE 184
E
Sbjct: 322 EE 323
>gi|158254720|dbj|BAF83333.1| unnamed protein product [Homo sapiens]
Length = 221
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 90/176 (51%), Gaps = 25/176 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRNGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+ CYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 117 GLPPSGSWQDLKDHMREAGDACYADVQK--DGVGMVEYLRKEDMEYALRKLDDTKF 170
>gi|84998374|ref|XP_953908.1| splicing factor (SR protein) [Theileria annulata]
gi|65304906|emb|CAI73231.1| splicing factor (SR protein), putative [Theileria annulata]
Length = 341
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 25/192 (13%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-------FGFVEFEDYRDADDAVYELN 58
V++G LP V ERD+ +G I+DV +K+G + F+EF R A+DAV +
Sbjct: 15 VFVGNLPDRVDERDIHDLFDKFGEIKDVDIKHGKTSNYTSYAFIEFASVRSAEDAVDSRD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G R+ VE A E+ R Y SY P R DR +RY PPTR+D+RL++
Sbjct: 75 GYEYDRYRLRVEFA------GEKKPRRYPSYDRPRDR-----DRSNRYPPPTRTDYRLVI 123
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL--- 175
NL WQ LKD MR+ G V Y + +G V++ SDMK A+ KLD +EL
Sbjct: 124 SNLPHGCRWQHLKDHMRKAGPVGYVNI---VHGKGFVDYMHKSDMKYAIRKLDGSELTTP 180
Query: 176 -NGRRIRLIEDK 186
+ RIR+ +D+
Sbjct: 181 DDSCRIRVKKDE 192
>gi|134083249|emb|CAK46820.1| unnamed protein product [Aspergillus niger]
Length = 367
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 125/244 (51%), Gaps = 31/244 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E+ G G+I ++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMNGFGFIEYEDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
GER+TV+ A+G R + ++ P DR + P P R+ R++V
Sbjct: 65 FKGERLTVQFARGPRRKE--------NFPGP-------MDRPNM--PRPRRTIFRMMVSG 107
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKDF RQ G +V Y++ R G VEFE+++D+K A++KLD E G R
Sbjct: 108 LPE-TSWQDLKDFARQSGLDVVYSET-GRELGRGFVEFETANDLKTAIEKLDGREFKGSR 165
Query: 180 IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKAKSVSR 239
+ I D + + R +SRS RS R + +PR +A R
Sbjct: 166 VTCIADI-----QTYPDERAIRDPYRSRSPRRSYPPMDEYDR-RFPAPRGYSPRAHYRER 219
Query: 240 SPSP 243
SP P
Sbjct: 220 SPIP 223
>gi|55742372|ref|NP_001006919.1| serine/arginine-rich splicing factor 1 [Xenopus (Silurana)
tropicalis]
gi|92058727|sp|Q6DII2.1|SRSF1_XENTR RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|49523075|gb|AAH75558.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 99/186 (53%), Gaps = 16/186 (8%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD--------RYGPPT 110
G G R+ VE + + RG G G G G RYGPP+
Sbjct: 76 GYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPS 135
Query: 111 R-SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDK 169
R S++R++V L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ K
Sbjct: 136 RRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRK 193
Query: 170 LDNAEL 175
LDN +
Sbjct: 194 LDNTKF 199
>gi|349802333|gb|AEQ16639.1| putative serine arginine-rich splicing factor 6 [Pipa carvalhoi]
Length = 93
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 57/69 (82%)
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
ENLS+R SWQDLKDFMR+ GEV YADAHK NEGV+EF S SDMK+AL+KLD E+NGR
Sbjct: 1 ENLSTRCSWQDLKDFMRRAGEVTYADAHKERTNEGVIEFRSYSDMKRALEKLDGTEINGR 60
Query: 179 RIRLIEDKP 187
RIRL+E K
Sbjct: 61 RIRLVEGKT 69
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 97/177 (54%), Gaps = 7/177 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG + + LK G+ FVEF+D RDA+DA++ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
G R+ VE+A G RS + R + R D P+R S+ R++V
Sbjct: 69 DFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVT 128
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ ++ R GVV++ DMK AL KLD+ E
Sbjct: 129 GLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEF 185
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 135/271 (49%), Gaps = 20/271 (7%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG + + LK G+ FVEF+D RDA+DA++ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
G R+ VE+A G RS + R + R D P+R S+ R++V
Sbjct: 69 DFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVT 128
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL--- 175
L S SWQDLKD MR+ G+VC++ ++ R GVV++ DMK AL KLD+ E
Sbjct: 129 GLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNA 188
Query: 176 --NGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKS--K 231
NG +R+ E R R SR S S+SRS KS +
Sbjct: 189 FSNG-YVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRR 247
Query: 232 SKAKSVSRSPSPSKTRKRSRSRSDSRARKVS 262
S AKS SRSP P RS+SRS S R ++
Sbjct: 248 SPAKSTSRSPGP-----RSKSRSPSPRRWIT 273
>gi|384950066|gb|AFI38638.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 221
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 90/176 (51%), Gaps = 25/176 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LK F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRNGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 117 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGVGMVEYLRKEDMEYALRKLDDTKF 170
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 98/197 (49%), Gaps = 44/197 (22%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VRER++E YGRI D+ LK G+ F+EFED RDA+DA+ +G
Sbjct: 9 IYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRY-------------- 106
+ G R+ VEIA G R PPP DR Y
Sbjct: 69 NFDGNRLRVEIAHG--------------GRGPPPA---SVDRYSIYSSGGGRGGGGSASE 111
Query: 107 ------GPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK--RHRNEGVVEFE 158
G RS++R+ V L S SWQDLKD MR+ G+VC+A + G+V+F
Sbjct: 112 NGGRAGGVSRRSEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGSAGTMGIVDFT 171
Query: 159 SSSDMKKALDKLDNAEL 175
+ DMK A+ KLD++E
Sbjct: 172 NYDDMKYAIRKLDDSEF 188
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 20/176 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK GF FVEFED RDA+DA+ +G
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G GR S+ R G +++R++V
Sbjct: 135 NFDGNRLRVELAHG-------GRGNSSSFNN-------SGGGGRRGGVSRHTEYRVLVTG 180
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR G+VCY++ ++ G+V++ + DMK A+ KLD++E
Sbjct: 181 LPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEF 236
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 15 CRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G R+ VE + G G G G G R P RS++R+IV
Sbjct: 75 GYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIV 134
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN +
Sbjct: 135 SGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDNTKF 189
>gi|326433655|gb|EGD79225.1| splicing factor [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 98/191 (51%), Gaps = 30/191 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G LPY +RER+++ +GRI ++ +K + FV FED RDA+DAV +G G
Sbjct: 5 RIYVGNLPYDIREREIDDLFYKFGRIEEITIKGPYAFVSFEDSRDAEDAVRRRDGYEFGG 64
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
R+ VE A G R ERG R + S+ RL V NL
Sbjct: 65 GRLRVEFANGGRR--ERGARAFNG---------------------QHSEFRLRVSNLPRT 101
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL-----NGRR 179
SWQD+KDF R+ GEV +A+ H G+VEF DM+ AL L+ +L +
Sbjct: 102 ASWQDVKDFCREAGEVLFAEVF--HDGTGLVEFRREDDMEWALRNLNERKLRSHLGDSDI 159
Query: 180 IRLIEDKPRGG 190
+ L+ED+ GG
Sbjct: 160 VTLVEDRGEGG 170
>gi|348518531|ref|XP_003446785.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 264
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 96/178 (53%), Gaps = 10/178 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FV+F+D RDA+DAVY +
Sbjct: 15 CRIYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFDDPRDAEDAVYGRD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE + G G G G RYGPP+R S++R++
Sbjct: 75 GYDYDGYRLRVEFPRSGRGGGGGGGGGGGGGGGG--GGGGMGPPRGRYGPPSRRSENRVV 132
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN +
Sbjct: 133 VSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDNTKF 188
>gi|47086241|ref|NP_998064.1| splicing factor, arginine/serine-rich 9 [Danio rerio]
gi|45501375|gb|AAH67134.1| Zgc:77449 [Danio rerio]
Length = 244
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 104/196 (53%), Gaps = 23/196 (11%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVY 55
M ++Y+G LP V+ERD+E YG+IRD+ LKN F FV FED RDA+DAV+
Sbjct: 1 MSDGRIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVF 60
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
NG ++ VE R GS + P G G R P RS+ R
Sbjct: 61 GRNGYGFGDCKLRVEYP-----------RSSGSKFSGPAGGGGGGPRGRFGPPTRRSEFR 109
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
+IV L SWQDLKD MR+ G+VC+AD + EGVVEF DM+ AL +LD+ E
Sbjct: 110 VIVTGLPPTGSWQDLKDHMREAGDVCFADVQR--DGEGVVEFLRREDMEYALRRLDSTEF 167
Query: 176 NGRR-----IRLIEDK 186
+ IR++E++
Sbjct: 168 RSHQGETAYIRVMEER 183
>gi|42561847|ref|NP_172386.3| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775270|emb|CAB42557.1| SF2/ASF-like splicing modulator Srp30 [Arabidopsis thaliana]
gi|23297699|gb|AAN13011.1| putative SF2/ASF splicing modulator Srp30 [Arabidopsis thaliana]
gi|332190279|gb|AEE28400.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 268
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 93/176 (52%), Gaps = 19/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R+ ++E YG I D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VEIA G GRR P + P RSD+R++V
Sbjct: 69 DFDGCRLRVEIAHG-------GRR------FSPSVDRYSSSYSASRAPSRRSDYRVLVTG 115
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VC+++ R GVV++ + DMK A+ KLD E
Sbjct: 116 LPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEF 171
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 101/176 (57%), Gaps = 15/176 (8%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI ++ LK GF FVEFED RDA+DA++ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G GR S P G G R G +++R++V
Sbjct: 69 NFDGNRLRVELAHG-------GRANSSSL--PNSYGGGGGGGGRRGGVSRHTEYRVLVTG 119
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKR-HRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD++E
Sbjct: 120 LPSSASWQDLKDHMRKAGDVCFSEVYREGDGTTGIVDYTNYDDMKYAIRKLDDSEF 175
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 98/188 (52%), Gaps = 35/188 (18%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDA+DA +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT---------- 110
+ G R+ VE A G RG G G HDR +G
Sbjct: 69 NFDGNRLRVEPA--------HGGRGSG---------GPSHDRSSSFGGGGGGGGGGRRGV 111
Query: 111 --RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKAL 167
+D+R++V L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+
Sbjct: 112 SRHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVYREGSGTTGIVDYTNYDDMKYAI 171
Query: 168 DKLDNAEL 175
KLD+ E
Sbjct: 172 KKLDDTEF 179
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 94/177 (53%), Gaps = 28/177 (15%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRXGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G R+ VE + + RGR PP RR S++R++V
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRRGRY------GPPSRR---------------SENRVVV 114
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 115 SGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTKF 169
>gi|79582138|ref|NP_683288.2| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30, variant 1 [Arabidopsis
thaliana]
gi|332190280|gb|AEE28401.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 256
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 93/176 (52%), Gaps = 19/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R+ ++E YG I D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VEIA G GRR P + P RSD+R++V
Sbjct: 69 DFDGCRLRVEIAHG-------GRR------FSPSVDRYSSSYSASRAPSRRSDYRVLVTG 115
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VC+++ R GVV++ + DMK A+ KLD E
Sbjct: 116 LPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEF 171
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 117/226 (51%), Gaps = 24/226 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 12 CRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRKGPPFAFVEFEDPRDADDAVRARDG 71
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
G R+ VE +G GR + P RG PP R S++R++V
Sbjct: 72 YDYDGYRLRVEFPRGGGGGARGGRSQPDRFGPRPAARG----------PPARRSEYRVLV 121
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
L SWQDLKD MR+ G+VC+AD K GVVEF DMK A+ KLD++
Sbjct: 122 TGLPPSGSWQDLKDHMREAGDVCFADTFK--DGTGVVEFLRHEDMKYAVKKLDDSRFRSH 179
Query: 179 R-----IRLIEDKPRGGGRG-RSRSSSSRSRSKSRSRSRSSKSRSP 218
IR+ ED GGG G R RS ++ S S +R R S S SP
Sbjct: 180 EGEVSYIRVKEDYGSGGGGGLRDRSPEYQAGSPSYTR-RGSPSYSP 224
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R+R+++ YG I +V LK G+ FVEFED RDA+DA+ +G
Sbjct: 46 LYVGNLPGDIRQREVKDLFYKYGPIVEVDLKIPPRPPGYAFVEFEDARDAEDAIRGRDGY 105
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G GRR + +P R R GP RSD+R++V
Sbjct: 106 NFDGCRLRVELAHG-------GRR----HSSPGDRYSSYSGRSGSRGPSRRSDYRVLVTG 154
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ + R G+V++ + DMK A+ KLD++E
Sbjct: 155 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKHAIKKLDDSEF 210
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 104/204 (50%), Gaps = 27/204 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVYELN 58
++YIG LP +RERDLE YG+I + LK+ F FVEFED RDA+DA+ +
Sbjct: 7 CRIYIGNLPSDIRERDLEDLFYKYGKILSISLKDNRRGPPFAFVEFEDKRDAEDAIDGRD 66
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G R+ VE +G R + R P RSDHR+IV
Sbjct: 67 GYDFDGCRLRVEAPRGGGGGGGDYGRRGRGNGSGGGRG-----------PARRSDHRVIV 115
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
L SWQDLKD MR+ GEV +AD ++ GVVEF SD+K AL LD+++
Sbjct: 116 SGLPQTGSWQDLKDHMREAGEVYFADVYR--DGTGVVEFAHYSDVKYALKHLDDSKFRSH 173
Query: 179 R-----IRLIEDKPRGGGRGRSRS 197
+R+ ED+ GR RSRS
Sbjct: 174 EGETSYVRVKEDR----GRSRSRS 193
>gi|118835441|gb|AAI28932.1| Sfrs1 protein [Xenopus laevis]
Length = 294
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 46 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 105
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDR-----YGPPTR-S 112
G G R+ VE + + RG G G G G YGPP+R S
Sbjct: 106 GYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRS 165
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDN 172
++R++V L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN
Sbjct: 166 EYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDN 223
Query: 173 AEL 175
+
Sbjct: 224 TKF 226
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYYGYRLRVEFPRSGRGTGRGGSGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 15/176 (8%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAEDAIAGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE A G GR SY G G S++R++V
Sbjct: 69 NFDGHRLRVEAAHG-------GRGNTSSYDRSSGFGGGGGGARRGVS--RHSEYRVLVTG 119
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD+ E
Sbjct: 120 LPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEF 175
>gi|226288775|gb|EEH44287.1| hypothetical protein PADG_00576 [Paracoccidioides brasiliensis
Pb18]
Length = 303
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 101/187 (54%), Gaps = 27/187 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK---GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
T++Y+G LP V ++++E G G+I ++ L +GFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMSGFGFIEYEDAMDAKDVV--PDGT 64
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVE 119
GER+TV+ A RG R ++ PP R P P R+ +R+ +
Sbjct: 65 DFKGERLTVQFA--------RGPRHKETFSGPPDRSS---------APRPRRTIYRMQIS 107
Query: 120 NLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
L SWQDLKDF RQ G +V Y++ H G VEFE+ SD+K A++KLD E G
Sbjct: 108 GLPE-TSWQDLKDFARQSGLDVVYSETG--HDGRGFVEFETGSDLKTAVEKLDGREFKGS 164
Query: 179 RIRLIED 185
R+ +D
Sbjct: 165 RVLCTQD 171
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo sapiens]
Length = 253
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|224123080|ref|XP_002318990.1| predicted protein [Populus trichocarpa]
gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 98/176 (55%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E YG I D+ LK G+ FVEFE+ RDA+DA+ +G
Sbjct: 8 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 67
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G GRR + +P GP RSD+R++V
Sbjct: 68 NFDGCRLRVELAHG-------GRR----HSSPVDHYSSYSGSSGSRGPSKRSDYRVLVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ + R G+V++ + DMK A+ KLD++E
Sbjct: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLDDSEF 172
>gi|426247382|ref|XP_004017465.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Ovis
aries]
Length = 226
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 90/176 (51%), Gaps = 25/176 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRI ++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R+ PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRSGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD +
Sbjct: 117 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDETKF 170
>gi|134085783|ref|NP_001076867.1| serine/arginine-rich splicing factor 9 [Bos taurus]
gi|358421698|ref|XP_003585083.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Bos taurus]
gi|133777441|gb|AAI14700.1| SFRS9 protein [Bos taurus]
gi|296478484|tpg|DAA20599.1| TPA: splicing factor, arginine/serine-rich 9 [Bos taurus]
Length = 221
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 90/176 (51%), Gaps = 25/176 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRI ++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R+ PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRSGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD +
Sbjct: 117 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDETKF 170
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 94/188 (50%), Gaps = 25/188 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+D VY +
Sbjct: 46 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRD 105
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + G G G PP R RS++
Sbjct: 106 GYDYYGYRLRVEFPPSGRGTGRGGSGGGGGGAPRGRYGPPSR--------------RSEN 151
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 152 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 209
Query: 175 LNGRRIRL 182
+ L
Sbjct: 210 FRSHELSL 217
>gi|3249109|gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit
gb|M72709 from Homo sapiens. ESTs gb|T42588 and
gb|R65514 come from this gene [Arabidopsis thaliana]
Length = 237
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 93/176 (52%), Gaps = 19/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R+ ++E YG I D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VEIA G GRR P + P RSD+R++V
Sbjct: 69 DFDGCRLRVEIAHG-------GRR------FSPSVDRYSSSYSASRAPSRRSDYRVLVTG 115
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VC+++ R GVV++ + DMK A+ KLD E
Sbjct: 116 LPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEF 171
>gi|402899743|ref|XP_003912847.1| PREDICTED: serine/arginine-rich splicing factor 1 [Papio anubis]
Length = 375
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 143 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 202
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLI 117
G G R+ VE + + G G G RYGPP+R S++R++
Sbjct: 203 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGG-----------GAPRGRYGPPSRRSENRVV 251
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 252 VSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTKF 307
>gi|114108043|gb|AAI23123.1| Sfrs1 protein [Xenopus laevis]
Length = 296
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 48 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 107
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDR-----YGPPTR-S 112
G G R+ VE + + RG G G G G YGPP+R S
Sbjct: 108 GYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRS 167
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDN 172
++R++V L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN
Sbjct: 168 EYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDN 225
Query: 173 AEL 175
+
Sbjct: 226 TKF 228
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 88/178 (49%), Gaps = 37/178 (20%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN------GFGFVEFEDYRDADDAVYEL 57
+VY+G LP VRE+DL YG I DV LKN F FVEFED RDA+DAV
Sbjct: 9 CRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGR 68
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
+G G R+ VE +G GS PPPRR SD R+
Sbjct: 69 DGHEFDGYRIRVEFPRG------------GS--GPPPRR---------------SDFRVQ 99
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L SWQDLKD MR+ G+V + D K GVVEF DMK A+ LD+++
Sbjct: 100 VSGLPPTGSWQDLKDHMREAGDVLFTDVFK--DGTGVVEFARYDDMKFAIRNLDDSKF 155
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 115/228 (50%), Gaps = 15/228 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D+E +G+I + LKN F FVEFED RDA+DAV+ +G
Sbjct: 9 ARIYVGNLPPDIRTKDIEDLFYKFGKIAYIDLKNRRGPPFAFVEFEDPRDAEDAVHARDG 68
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT--RSDHRLI 117
G R+ VE +G S G G G G + R P R+++R+I
Sbjct: 69 YDYDGYRLRVEFPRGSQNSGGGHSGGRGGDGGRGGGDGGGSNGGGRSRGPPARRTNYRVI 128
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
V L SWQDLKD MR+ G+VCYAD +K G+VEF DMK A+ KLD++
Sbjct: 129 VTGLPPTGSWQDLKDHMREAGDVCYADTYK--DGTGMVEFLRYEDMKYAIKKLDDSRFRS 186
Query: 178 RR-----IRLIEDK--PRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSP 218
+R+ ED GG R RSRS S SR S S SP
Sbjct: 187 HEGEVSYVRVKEDSGDGNGGTRDRSRSYSPAGGGGKTRGSRGSPSYSP 234
>gi|392577928|gb|EIW71056.1| hypothetical protein TREMEDRAFT_56308 [Tremella mesenterica DSM
1558]
Length = 273
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 99/192 (51%), Gaps = 14/192 (7%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M +VYIG LP V + D+E KG G I DV + +GFVEFE RDA+DA+ + NG
Sbjct: 1 MSNRRVYIGHLPPNVTKTDVEDVFKGLGPILDVRILGNYGFVEFESSRDAEDALRDYNGV 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
SLLGE + VE + R G PPR GPP R R+ V
Sbjct: 61 SLLGENIIVEAPRERRRDAYGPGVGGYRGGDAPPR-----------GPPRRG-VRINVVG 108
Query: 121 LSSRVSWQDLKDFMRQ-VGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
+ SWQDLKD+ R V YAD + + GV+E+ + + ++A+ +L ++NG+
Sbjct: 109 IPGSTSWQDLKDYGRLGSNMVTYADVDRYNPGVGVIEYPTMGEAEEAMSRLAGVDINGQP 168
Query: 180 IRLIEDKPRGGG 191
+RL E P G G
Sbjct: 169 VRL-ELAPAGAG 179
>gi|27503247|gb|AAH42354.1| Sfrs1 protein, partial [Xenopus laevis]
Length = 283
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 35 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 94
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDR-----YGPPTR-S 112
G G R+ VE + + RG G G G G YGPP+R S
Sbjct: 95 GYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRS 154
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDN 172
++R++V L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN
Sbjct: 155 EYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDN 212
Query: 173 AEL 175
+
Sbjct: 213 TKF 215
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 98/196 (50%), Gaps = 44/196 (22%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VRER++E YGRI D+ LK G+ F+EFED RDA+DA+ +G
Sbjct: 9 IYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRY-------------- 106
+ G R+ VEIA G R PPP DR Y
Sbjct: 69 NFDGNRLRVEIAHG--------------GRGPPP----AVDRYSIYSSGGRGGGGSAADC 110
Query: 107 -----GPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK--RHRNEGVVEFES 159
G RS++R+ V L S SWQDLKD MR+ G+VC+A + G+V+F +
Sbjct: 111 GGRAGGVSRRSEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGTSGTMGIVDFTN 170
Query: 160 SSDMKKALDKLDNAEL 175
DMK A+ KLD++E
Sbjct: 171 YDDMKYAIRKLDDSEF 186
>gi|397525476|ref|XP_003832692.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan paniscus]
Length = 274
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 87/172 (50%), Gaps = 25/172 (14%)
Query: 9 GGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGKSLL 63
G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 72 GNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYG 131
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R+ VE R+ R PP R RSD R++V L
Sbjct: 132 QCRLRVEFP----RTYGGRGGWPRGGRNGPPTR--------------RSDFRVLVSGLPP 173
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 174 SGSWQDLKDHMREAGDVCYADVQK--DGVGMVEYLRKEDMEYALRKLDDTKF 223
>gi|148228289|ref|NP_001088400.1| serine/arginine-rich splicing factor 9 [Xenopus laevis]
gi|54261635|gb|AAH84289.1| LOC495254 protein [Xenopus laevis]
Length = 230
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 95/181 (52%), Gaps = 26/181 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN------GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +RE++LE YGRIR V LKN F F+ ++D RDA+DAV+ N
Sbjct: 17 RIYVGNLPSDIREKELEDLFDRYGRIRTVELKNRGGSSAPFAFISYQDPRDAEDAVFGRN 76
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G R+ VE + S G G G + PP R RS++
Sbjct: 77 GYDFGSCRLRVEFPRSFRGSGGGGGGGGGYGGSRGRNGPPSR--------------RSEY 122
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R+IV L SWQDLKD MR+ G+VCYAD HK G+VEF DM+ AL KLD+ +
Sbjct: 123 RVIVSGLPPSGSWQDLKDHMREAGDVCYADVHK--DGMGIVEFIRKEDMEYALRKLDDTK 180
Query: 175 L 175
Sbjct: 181 F 181
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 109/222 (49%), Gaps = 34/222 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E YG I D+ LK G+ FVEFED RDA+DA+Y +G
Sbjct: 9 IYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD-DRYGPPTRS-DHRLIV 118
G R+ VE A G G GH DRY S D ++V
Sbjct: 69 KFDGCRLRVEFAHG----------------------GRGHSSSVDRYSRSGSSRDFAVLV 106
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAEL-N 176
L S SWQDLKD MR+ G+VC+++ + R G+V++ + DMK A+ KLD++E N
Sbjct: 107 TGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRN 166
Query: 177 GRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSP 218
+ K SRS S SR SR S SRSP
Sbjct: 167 AFSRAYVRVKEYDSRHSYSRSPSLDSRRSDYSR---SPSRSP 205
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 20/176 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK GF FVEFED RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G GR S+ R G +++R++V
Sbjct: 69 NFDGNRLRVELAHG-------GRGNSSSFNN-------SGGGGRRGGVSRHTEYRVLVTG 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR G+VCY++ ++ G+V++ + DMK A+ KLD++E
Sbjct: 115 LPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEF 170
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 124/249 (49%), Gaps = 34/249 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
+++Y+G LP VR +D+E YG++ V LK+ F FVEFED RDA+DAV +G
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGKVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE +G+ + G R Y + R R R+++R+IV
Sbjct: 65 YDYEGYRLRVEFPRGL-GPRGPGGRPYDTGRNLSLSRNASGGGSSS--GGRRANYRVIVS 121
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKD MR+ G+VCY D + G+VE+ DMK AL KLD+ +
Sbjct: 122 GLPASGSWQDLKDHMREAGDVCYTDVLR--DGTGIVEYGRYEDMKYALRKLDDTKFKSHE 179
Query: 180 -----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKA 234
IR+ ED G SR+ S+SRSP R+ GSP+ S S +
Sbjct: 180 GETSYIRVREDN------GESRA--------------HSRSRSPVGRASRGSPQYSPSYS 219
Query: 235 KSVSRSPSP 243
S S S SP
Sbjct: 220 NSGSHSHSP 228
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 96/184 (52%), Gaps = 33/184 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E YG I D+ LK G+ FVEFED RDA DA+Y +G
Sbjct: 9 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 68
Query: 61 SLLGERVTVEIAKG-------IDR-SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS 112
G R+ VE+A G +DR S+ GR G G RS
Sbjct: 69 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSG-------------------SRGVSRRS 109
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLD 171
D+R++V L SWQDLKD MR+ G VC++ + R G+V++ + D+K A+ KLD
Sbjct: 110 DYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLD 169
Query: 172 NAEL 175
++E
Sbjct: 170 DSEF 173
>gi|426247384|ref|XP_004017466.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Ovis
aries]
Length = 200
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 90/176 (51%), Gaps = 25/176 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRI ++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R+ PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRSGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD +
Sbjct: 117 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDETKF 170
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 94/176 (53%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG I + LK G+ FVEFED +DA+DA+ +G
Sbjct: 35 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 94
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE A G R R Y S+ + G RS++R+IV
Sbjct: 95 DFDGHRLRVEAAHG-GRGNSSSRDRYSSHS----------NGRGGRGVSRRSEYRVIVNG 143
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ H G+V++ + DMK A+ KLD++E
Sbjct: 144 LPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEF 199
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Monodelphis
domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 96/182 (52%), Gaps = 26/182 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP-----PPRRGWGHDRDDRYGPPTRSD 113
G G R+ VE + + G G G AP PP R RS+
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGGAPRGRYGPPSR--------------RSE 121
Query: 114 HRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
+R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN
Sbjct: 122 YRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNT 179
Query: 174 EL 175
+
Sbjct: 180 KF 181
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 99/177 (55%), Gaps = 21/177 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI ++ LK GF FVEFED RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
+ G R+ VE+A G GR S H R G +R +++R++V
Sbjct: 69 NFDGNRLRVELAHG-------GRANSSSLPN-------SHGGGGRRGGVSRHTEYRVLVT 114
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD+ E
Sbjct: 115 GLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEF 171
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 93/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEY 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R+IV L SWQDLKD MR+ G+VCYAD + GVVEF DM A+ KLDN +
Sbjct: 122 RVIVSGLPPSGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 96/184 (52%), Gaps = 33/184 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E YG I D+ LK G+ FVEFED RDA DA+Y +G
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 61 SLLGERVTVEIAKG-------IDR-SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS 112
G R+ VE+A G +DR S+ GR G G RS
Sbjct: 100 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSG-------------------SRGVSRRS 140
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLD 171
D+R++V L SWQDLKD MR+ G VC++ + R G+V++ + D+K A+ KLD
Sbjct: 141 DYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLD 200
Query: 172 NAEL 175
++E
Sbjct: 201 DSEF 204
>gi|154284490|ref|XP_001543040.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406681|gb|EDN02222.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 300
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 25/186 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK---GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
T++Y+G LP V ++++E G G+I ++ L +GFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMSGFGFIEYEDAMDAKDVV--PDGT 64
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
GER+TV+ A+G R +E AP PRR + +R+ +
Sbjct: 65 DFKGERLTVQFARGP-RHKETFSGPSDRSSAPRPRR---------------TIYRMQISG 108
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKDF RQ G +V Y++A H G VEFE+ SD+K A++KLD E G R
Sbjct: 109 LPE-TSWQDLKDFARQSGLDVVYSEAG--HDGRGFVEFETGSDLKTAVEKLDGREFKGSR 165
Query: 180 IRLIED 185
+ +D
Sbjct: 166 VLCTQD 171
>gi|83767572|dbj|BAE57711.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867601|gb|EIT76847.1| alternative splicing factor SRp55/B52/SRp75 [Aspergillus oryzae
3.042]
Length = 298
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 104/185 (56%), Gaps = 23/185 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V ++D+E+ G G+I ++ L NGFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMNGFGFIEYEDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
GER+TV+ A+G R + ++ P DR + P R+ +R++V L
Sbjct: 65 FKGERLTVQFARGPRRKE--------NFPGP-------MDRPNMPRP-RRTVYRMMVSGL 108
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF R G +V Y++ R G VEFE+++D+K A++KLD + G R+
Sbjct: 109 PE-TSWQDLKDFARGAGLDVVYSET-GREPGRGFVEFETANDLKTAIEKLDGRDFKGSRV 166
Query: 181 RLIED 185
+ D
Sbjct: 167 SCVAD 171
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI D+ LK + FVEFE RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+L G R+ VE+A G RRG G G R+G S+ R+IV
Sbjct: 69 NLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRG 128
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + GVV++ + DMK A+ KLD+ E
Sbjct: 129 LPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEF 184
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 96/184 (52%), Gaps = 33/184 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E YG I D+ LK G+ FVEFED RDA DA+Y +G
Sbjct: 9 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 68
Query: 61 SLLGERVTVEIAKG-------IDR-SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS 112
G R+ VE+A G +DR S+ GR G G RS
Sbjct: 69 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSG-------------------SRGVSRRS 109
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLD 171
D+R++V L SWQDLKD MR+ G VC++ + R G+V++ + D+K A+ KLD
Sbjct: 110 DYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLD 169
Query: 172 NAEL 175
++E
Sbjct: 170 DSEF 173
>gi|124802534|ref|XP_001347501.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
gi|23495082|gb|AAN35414.1|AE014832_36 pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
Length = 538
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 93/176 (52%), Gaps = 27/176 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK------NGFGFVEFEDYRDADDAVYELNG 59
+Y+G LP V E ++ YGRI+ + +K + + FV + D +DAD A+ +G
Sbjct: 14 IYVGNLPGNVIEEEVYDLFGKYGRIKYIDIKPSRSSSSSYAFVHYYDLKDADYAIERRDG 73
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE + G +RS +G YR +DD GPP R+++R+IV
Sbjct: 74 YKFDGFRLRVEHS-GENRS-------FGKYRK----------KDDGVGPPIRTENRVIVT 115
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
NL WQ LKD MRQ G+V YA+ R +G+VEF S DM A++K D AE
Sbjct: 116 NLPDNCRWQHLKDIMRQCGDVGYANI---ERGKGIVEFVSYDDMLYAIEKFDGAEF 168
>gi|395845812|ref|XP_003795615.1| PREDICTED: serine/arginine-rich splicing factor 1 [Otolemur
garnettii]
Length = 312
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 80 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 139
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 140 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 185
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 186 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 243
Query: 175 L 175
Sbjct: 244 F 244
>gi|417409273|gb|JAA51151.1| Putative splicing factor arginine/serine-rich 1-like protein,
partial [Desmodus rotundus]
Length = 278
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 46 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 105
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 106 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 151
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 152 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 209
Query: 175 L 175
Sbjct: 210 F 210
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2 [Canis
lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla gorilla
gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|296490264|tpg|DAA32377.1| TPA: splicing factor, arginine/serine-rich 9-like [Bos taurus]
Length = 221
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 89/176 (50%), Gaps = 25/176 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YG I ++ LKN F FV FED RDA+DAVY NG
Sbjct: 15 RIYVGNLPNDVREKDLEDLFYKYGHISEIELKNRHGLVPFAFVRFEDPRDAEDAVYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R+ PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRSGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD +
Sbjct: 117 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDETKF 170
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI D+ LK + FVEFE RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+L G R+ VE+A G RRG G G R+G S+ R+IV
Sbjct: 69 NLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRG 128
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + GVV++ + DMK A+ KLD+ E
Sbjct: 129 LPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEF 184
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 101/200 (50%), Gaps = 29/200 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNGK 60
KVY+G LP VRE+++E YGRI+ V +K+G F FVEFED+RDA+DAV +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSD------- 113
G R+ VE +G+ GR P + G H D G
Sbjct: 70 EFDGRRIRVEFTRGVGPRGPSGR---------PLQDGGDHRGGDFRGGRGGGRGGGPQRR 120
Query: 114 --HRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLD 171
+R+IVE L SWQDLKD MR G+VCYAD + GVVEF D+K A+ KLD
Sbjct: 121 TGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD--GTGVVEFTRYEDVKYAVRKLD 178
Query: 172 NAELNGRR-----IRLIEDK 186
+ + IR+ ED
Sbjct: 179 DTKFRSHEGETAYIRVREDN 198
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 20/176 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK GF FVEFED RDA+DA+ +G
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G GR S+ R G +++R++V
Sbjct: 135 NFDGNRLRVELAHG-------GRGNSSSFNN-------SGGGGRRGGVSRHTEYRVLVTG 180
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR G+VCY++ ++ G+V++ + DMK A+ KLD++E
Sbjct: 181 LPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEF 236
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|355568562|gb|EHH24843.1| hypothetical protein EGK_08569 [Macaca mulatta]
Length = 292
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 94/188 (50%), Gaps = 25/188 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + G G G PP R RS++
Sbjct: 76 GYDYYGYRLRVEFPPSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GV+EF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVMEFVRKEDMTYAVRKLDNTK 179
Query: 175 LNGRRIRL 182
L
Sbjct: 180 FRSHEFCL 187
>gi|148669917|gb|EDL01864.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_b
[Mus musculus]
Length = 193
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|327282648|ref|XP_003226054.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Anolis
carolinensis]
Length = 245
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 90/176 (51%), Gaps = 23/176 (13%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE+ YGRIRD+ LK+ F FV FED RDA+DAVY NG
Sbjct: 37 RIYVGNLPANVREKDLEELFYKYGRIRDIELKSKRGLVPFAFVRFEDPRDAEDAVYGRNG 96
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE K G G P RS+ R++V
Sbjct: 97 YDYGQCRLRVEFPKPSRGRGGFGGGPRGRNGPPS----------------RRSEFRVLVS 140
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K GVVEF DM+ AL KLD+ +
Sbjct: 141 GLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGVVEFLRKEDMEYALRKLDDTKF 194
>gi|325190523|emb|CCA25022.1| premRNAsplicing factor SF2 putative [Albugo laibachii Nc14]
Length = 303
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 35/185 (18%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYE 56
+ ++Y+G LP +R R++E +G+I+D+ LK + F++FED RDA+DA+
Sbjct: 1 MSKRIYVGNLPMSIRTREVEDLFYKHGKIQDIDLKLPLRPPAYAFIDFEDARDAEDAIEA 60
Query: 57 LNGKSLLGERVTVEIA--KGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSD 113
+G G+R+ VE A K I++ + RG R GS
Sbjct: 61 RDGYKYEGQRLRVERANPKNIEKEKHVRGSRSKGS------------------------- 95
Query: 114 HRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
+ + V NL SRVSWQDLKDFMR+ GEV +A K +G+V+F+ DMK A+ +LD+
Sbjct: 96 NTVKVTNLPSRVSWQDLKDFMRKAGEVTFAKIDK--HGDGIVDFKHHDDMKYAIKRLDDT 153
Query: 174 ELNGR 178
+ R
Sbjct: 154 KFRNR 158
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+D VY +
Sbjct: 68 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRD 127
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + G G G PP R R ++
Sbjct: 128 GYDYYGYRLRVEFPPSGRGTGRGGSGGGGGGAPRGRYGPPSR--------------RCEN 173
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GV+EF DM A+ KLDN +
Sbjct: 174 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVMEFVRKEDMTYAVRKLDNTK 231
Query: 175 L 175
Sbjct: 232 F 232
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG + + LK G+ FVEF+D RDA+DA++ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G RS + R + G G GP RS+ R++V
Sbjct: 69 DFDGHRLRVELAHGGRRSSDDTRGSFNGGGR---GGGRGRGDGGSRGPSRRSEFRVLVTW 125
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L+S SWQDLKD + + G+VC++ ++ R GVV++ DMK AL KLD+ E
Sbjct: 126 LASSASWQDLKDHIAKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEF 181
>gi|255542752|ref|XP_002512439.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548400|gb|EEF49891.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 444
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 101/178 (56%), Gaps = 11/178 (6%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R+++ YG I V L+N G+ FV+FED +A++A+ +G
Sbjct: 9 LYVGNLPGDIRWREVKDLFYKYGLIVRVDLRNPPRTPGYAFVQFEDACNAEEAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDR--DDRYGPPTRSDHRLIV 118
+ G R+ VE+A G ++ G+G + P R + + +GP SDHR++V
Sbjct: 69 NFNGCRLRVELAYG---GRKHSTPGHGGRKHSFPGRHYNTCSGISENHGPSKHSDHRVLV 125
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MRQ G+VC++ R G+V++++ DMK A+ KLD++E
Sbjct: 126 TGLPSSASWQDLKDHMRQAGDVCFSRVFPGRGGKTGIVDYKNYDDMKHAIKKLDDSEF 183
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI D+ LK + FVEFE RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+L G R+ VE+A G RRG G G R+G S+ R+IV
Sbjct: 69 NLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRG 128
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + GVV++ + DMK A+ KLD+ E
Sbjct: 129 LPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEF 184
>gi|351713363|gb|EHB16282.1| Splicing factor, arginine/serine-rich 1 [Heterocephalus glaber]
Length = 292
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 93/188 (49%), Gaps = 25/188 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEI----AKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE G G R PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 LNGRRIRL 182
L
Sbjct: 180 FRSHEFCL 187
>gi|179074|gb|AAA35564.1| alternative [Homo sapiens]
gi|119614894|gb|EAW94488.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_c [Homo sapiens]
Length = 292
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 93/188 (49%), Gaps = 25/188 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEI----AKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE G G R PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 LNGRRIRL 182
L
Sbjct: 180 FRSHEFCL 187
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 96/184 (52%), Gaps = 33/184 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E YG I D+ LK G+ FVEFED RDA DA+Y +G
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 61 SLLGERVTVEIAKG-------IDR-SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS 112
G R+ VE+A G +DR S+ GR G G RS
Sbjct: 100 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSG-------------------SRGVSRRS 140
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLD 171
D+R++V L SWQDLKD MR+ G VC++ + R G+V++ + D+K A+ KLD
Sbjct: 141 DYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLD 200
Query: 172 NAEL 175
++E
Sbjct: 201 DSEF 204
>gi|118582269|ref|NP_001071634.1| serine/arginine-rich splicing factor 1 isoform 2 [Homo sapiens]
gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens]
gi|119614895|gb|EAW94489.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_d [Homo sapiens]
gi|168277706|dbj|BAG10831.1| splicing factor, arginine/serine-rich 1 [synthetic construct]
gi|410263646|gb|JAA19789.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308966|gb|JAA33083.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351429|gb|JAA42318.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
Length = 201
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 110/204 (53%), Gaps = 19/204 (9%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEF+D RDA+DAV+ +G
Sbjct: 20 CRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDG 79
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
G R+ VE +G S RG G R R G+ R GPP R S +R++V
Sbjct: 80 YDYDGYRLRVEFPRGGGPSSSFRGRGGGDSRG---RGDMGNSRGR--GPPARRSQYRVLV 134
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
L SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 135 TGLPPSGSWQDLKDHMREAGDVCFADVYK--DGTGVVEFLRYEDMKYAVKKLDDSRFRSH 192
Query: 179 R-----IRLIEDKPRGGGRGRSRS 197
IR+ ED GG RSRS
Sbjct: 193 EGEVAYIRVKED--HGGSGDRSRS 214
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 94/176 (53%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG I + LK G+ FVEFED +DA+DA+ +G
Sbjct: 110 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 169
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE A G R R Y S+ + G RS++R+IV
Sbjct: 170 DFDGHRLRVEAAHG-GRGNSSSRDRYSSHS----------NGRGGRGVSRRSEYRVIVNG 218
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ H G+V++ + DMK A+ KLD++E
Sbjct: 219 LPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEF 274
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 97/177 (54%), Gaps = 7/177 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG + + LK G+ FVEF+D RDA+DA++ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
G R+ VE+A G RS + R + R D P+R S+ R++V
Sbjct: 69 DFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVT 128
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ ++ R GVV++ DMK AL KLD+ E
Sbjct: 129 GLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEF 185
>gi|417397107|gb|JAA45587.1| Putative serine/arginine-rich splicing factor 1 isoform 2 [Desmodus
rotundus]
Length = 207
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 92/181 (50%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEI----AKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE G G R PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 98/176 (55%), Gaps = 19/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI ++ LK GF FVEFED RDA+DA++ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G GR S P G R +++R++V
Sbjct: 69 NFDGNRLRVELAHG-------GRANSSSL----PNSYGGGGRRGGVS--RHTEYRVLVTG 115
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD+ E
Sbjct: 116 LPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEF 171
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 92/167 (55%), Gaps = 18/167 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + G G RSD R++V
Sbjct: 69 NFDGYRLRVELAHG-----GRGQSYSYDRSSSYSSARRG-------GVSRRSDFRVMVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKA 166
L S SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A
Sbjct: 117 LPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYA 163
>gi|221053983|ref|XP_002261739.1| pre-mRNA splicing factor [Plasmodium knowlesi strain H]
gi|193808199|emb|CAQ38902.1| pre-mRNA splicing factor, putative [Plasmodium knowlesi strain H]
Length = 495
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 29/182 (15%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN--------GFGFVEFEDYRDADDA 53
+ + +Y+G LP V E ++ YGRI+ + +K F FV + D RDA+ A
Sbjct: 11 ISSCIYVGNLPGNVVEDEVYDLFSKYGRIKYIDVKKPRAPGVPYSFAFVHYFDSRDAEYA 70
Query: 54 VYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSD 113
+ +G G R+ VE + G +RS YG YR ++++ GPP R++
Sbjct: 71 IDRRDGYKYDGVRLRVEYS-GENRS-------YGKYR----------NKEEGTGPPVRTE 112
Query: 114 HRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
HR+I+ NL WQ LKD MRQ G+V YA+ R +GVVEF S DM A++K D +
Sbjct: 113 HRIIISNLPESCKWQHLKDVMRQCGDVGYANV---ERGKGVVEFISRDDMLYAIEKFDGS 169
Query: 174 EL 175
E
Sbjct: 170 EF 171
>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) variant [Homo sapiens]
Length = 233
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 92/181 (50%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 48 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 107
Query: 59 GKSLLGERVTVEI----AKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE G G R PP R RS++
Sbjct: 108 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 153
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 154 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 211
Query: 175 L 175
Sbjct: 212 F 212
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 94/176 (53%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG I + LK G+ FVEFED +DA+DA+ +G
Sbjct: 35 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 94
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE A G R R Y S+ + G RS++R+IV
Sbjct: 95 DFDGHRLRVEAAHG-GRGNSSSRDRYSSHS----------NGRGGRGVSRRSEYRVIVNG 143
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ H G+V++ + DMK A+ KLD++E
Sbjct: 144 LPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEF 199
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 96/184 (52%), Gaps = 33/184 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E YG I D+ LK G+ FVEFED RDA DA+Y +G
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 61 SLLGERVTVEIAKG-------IDR-SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS 112
G R+ VE+A G +DR S+ GR G G RS
Sbjct: 100 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSG-------------------SRGVSRRS 140
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLD 171
D+R++V L SWQDLKD MR+ G VC++ + R G+V++ + D+K A+ KLD
Sbjct: 141 DYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLD 200
Query: 172 NAEL 175
++E
Sbjct: 201 DSEF 204
>gi|354472029|ref|XP_003498243.1| PREDICTED: serine/arginine-rich splicing factor 1 [Cricetulus
griseus]
Length = 201
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|348562137|ref|XP_003466867.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Cavia porcellus]
gi|380788319|gb|AFE66035.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|383420723|gb|AFH33575.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|384941914|gb|AFI34562.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
Length = 201
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|148228480|ref|NP_001085252.1| serine/arginine-rich splicing factor 5 [Xenopus laevis]
gi|47717981|gb|AAH70967.1| MGC78772 protein [Xenopus laevis]
Length = 157
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 88/140 (62%), Gaps = 4/140 (2%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEF+D RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDARDADDAVYELDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPP----RRGWGHDRDDRYGPPTRSDHRL 116
L ERVT+E A+ R G G G R R DR PP R+++RL
Sbjct: 61 ELCNERVTIEHARLRSRGGGGGGGGGGPRGMGRGRYNDRFSSRRPRGDRSAPPIRTENRL 120
Query: 117 IVENLSSRVSWQDLKDFMRQ 136
IVENLSSRVSWQ + +
Sbjct: 121 IVENLSSRVSWQVCQSIIMH 140
>gi|392870838|gb|EJB12075.1| pre-RNA splicing factor Srp2, variant [Coccidioides immitis RS]
Length = 399
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 20/186 (10%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
G + L + V ++D+E+ G G+I D+ L +GFGF+E+ED DA D V +G
Sbjct: 103 GHGFFAWTLLFPVTKQDVEEHFNQHGSGKITDIKLMSGFGFIEYEDALDARDVVPAYHGT 162
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+TV+ A+G R +E AP PR R+ +R+ +
Sbjct: 163 DFKGSRLTVQFARG-PRHKETFSGPSDRSNAPRPR---------------RTPYRMQISG 206
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKDF RQ G +V Y++ + H G VEFE+ +D+K A++KLD E G R
Sbjct: 207 LPE-TSWQDLKDFARQSGLDVVYSETLRDHEGRGFVEFETGADLKTAIEKLDGREFKGSR 265
Query: 180 IRLIED 185
+ +D
Sbjct: 266 VTCTQD 271
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 96/184 (52%), Gaps = 33/184 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E YG I D+ LK G+ FVEFED RDA DA+Y +G
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 61 SLLGERVTVEIAKG-------IDR-SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS 112
G R+ VE+A G +DR S+ GR G G RS
Sbjct: 100 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSG-------------------SRGVSRRS 140
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLD 171
D+R++V L SWQDLKD MR+ G VC++ + R G+V++ + D+K A+ KLD
Sbjct: 141 DYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLD 200
Query: 172 NAEL 175
++E
Sbjct: 201 DSEF 204
>gi|336088099|dbj|BAK39909.1| splicing factor, arginine/serine-rich 1, transcript variant 2
[Cricetulus griseus]
Length = 201
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|118582271|ref|NP_001071635.1| serine/arginine-rich splicing factor 1 isoform 2 [Mus musculus]
gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus]
Length = 201
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 99/199 (49%), Gaps = 30/199 (15%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R R+++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RAEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA- 173
R++V L SWQDLKD MR+ G+VCYAD ++ GVVE DM A+ KLDN
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVECVPKEDMTYAVRKLDNTK 179
Query: 174 ----ELNGRRIRLIEDKPR 188
E I I D+PR
Sbjct: 180 FRSHEWETAYIPRIVDRPR 198
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 94/176 (53%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG I + LK G+ FVEFED +DA+DA+ +G
Sbjct: 35 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 94
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE A G R R Y S+ + G RS++R+IV
Sbjct: 95 DFDGHRLRVEAAHG-GRGNSSSRDRYSSHS----------NGRGGRGVSRRSEYRVIVNG 143
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ H G+V++ + DMK A+ KLD++E
Sbjct: 144 LPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEF 199
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 20/176 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK GF FVEFED RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G GR S+ R G +++R++V
Sbjct: 69 NFDGNRLRVELAHG-------GRGNSSSFNN-------SGGGGRRGGVSRHTEYRVLVTG 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR G+VCY++ ++ G+V++ + DMK A+ KLD++E
Sbjct: 115 LPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEF 170
>gi|146323402|ref|XP_754610.2| pre-RNA splicing factor Srp2 [Aspergillus fumigatus Af293]
gi|129558308|gb|EAL92572.2| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
Af293]
gi|159127623|gb|EDP52738.1| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
A1163]
Length = 272
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 21/163 (12%)
Query: 24 VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGR 83
V G G+I ++ L NGFGF+E+ED DA D V +G GER+TV+ A+G R +
Sbjct: 4 VHGSGKITEIKLMNGFGFIEYEDAMDARDVV--PDGSDFKGERLTVQFARGPRRKE---- 57
Query: 84 RGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCY 142
++ PP R P R+ R++V L SWQDLKDF RQ G +V Y
Sbjct: 58 ----NFPGPPDRPNMPR--------PRRTIFRMLVSGLPE-TSWQDLKDFARQSGLDVVY 104
Query: 143 ADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
++ R + G VEFE+++D+K A+DKLD E G R+ + D
Sbjct: 105 SET-GREQGRGFVEFETAADLKTAIDKLDGREFKGSRVSCVAD 146
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 125/249 (50%), Gaps = 34/249 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
+++Y+G LP VR +D+E YGR+ V LK+ F FVEFED RDA+DAV +G
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGRVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE +G+ + G R Y S R R G R+++R+IV
Sbjct: 65 YDYEGYRLRVEFPRGL-GPRGPGGRPYDSGRNLSVSRSAGGGGSSS--GSRRANYRVIVS 121
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKD MR+ G+VCY D + G+VE+ DMK AL KLD+ +
Sbjct: 122 GLPASGSWQDLKDHMREAGDVCYTDVLR--DGTGIVEYGRYEDMKYALRKLDDTKFKSHE 179
Query: 180 -----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKA 234
IR+ ED G SR+ S+SRSP R+ GSP+ S S +
Sbjct: 180 GETSYIRVKEDN------GESRA--------------HSRSRSPVGRASRGSPQYSPSYS 219
Query: 235 KSVSRSPSP 243
S S S SP
Sbjct: 220 NSGSHSHSP 228
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 99/177 (55%), Gaps = 21/177 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI ++ LK GF FVEFED RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
+ G R+ VE+A G GR S H R G +R +++R++V
Sbjct: 69 NFDGNRLRVELAHG-------GRANSSSLPN-------SHGGGGRRGGVSRHTEYRVLVT 114
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD+ E
Sbjct: 115 GLPSSASWQDLKDHMRKAGDVCFSEVYREVVGTIGIVDYTNYDDMKYAIRKLDDTEF 171
>gi|383422447|gb|AFH34437.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 90/176 (51%), Gaps = 30/176 (17%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRNGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 117 G-----SWQDLKDHMREAGDVCYADVQK--DGVGMVEYLRKEDMEYALRKLDDTKF 165
>gi|239606902|gb|EEQ83889.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis ER-3]
gi|327351368|gb|EGE80225.1| RNA recognition domain-containing protein containing protein
[Ajellomyces dermatitidis ATCC 18188]
Length = 299
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 25/186 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK---GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
T++Y+G LP V ++++E G G+I ++ L +GFGF+E+ED DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMSGFGFIEYEDAMDAKDVV--PDGT 64
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
GER+TV+ A+G R +E AP PRR + +R+ +
Sbjct: 65 DFKGERLTVQFARGP-RHKETFSGPSDRSSAPRPRR---------------TIYRMQISG 108
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKDF RQ G +V Y++ H G VEFE+ SD+K A++KLD E G R
Sbjct: 109 LPE-TSWQDLKDFARQSGLDVVYSETG--HDGRGFVEFETGSDLKTAVEKLDGREFKGSR 165
Query: 180 IRLIED 185
+ +D
Sbjct: 166 VLCTQD 171
>gi|159155810|gb|AAI54584.1| Zgc:77449 protein [Danio rerio]
Length = 246
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 102/198 (51%), Gaps = 25/198 (12%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVY 55
M ++Y+G LP V+ERD+E YG+IRD+ LKN F FV FED RDA+DAV+
Sbjct: 1 MSDGRIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVF 60
Query: 56 ELNGKSLLGERVTVEIAK--GIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSD 113
NG ++ VE + G S G G G P RS+
Sbjct: 61 GRNGYGFGDCKLRVEYPRSSGSKFSGPAGGGGGGGGPR-----------GRFGPPTRRSE 109
Query: 114 HRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
R+IV L SWQDLKD MR+ G+VC+AD + EGVVEF DM+ AL +LD+
Sbjct: 110 FRVIVTGLPPTGSWQDLKDHMREAGDVCFADVQR--DGEGVVEFLRREDMEYALRRLDST 167
Query: 174 ELNGRR-----IRLIEDK 186
E + IR++E++
Sbjct: 168 EFRSHQGETAYIRVMEER 185
>gi|297693630|ref|XP_002824116.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Pongo
abelii]
Length = 221
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 89/176 (50%), Gaps = 25/176 (14%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VRE+DLE YGRIR++ LKN F FV ED RDA+DA+Y NG
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREMELKNRHGLVPFAFVRLEDPRDAEDAIYGRNGY 75
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
R+ VE R+ R PP R RSD R++V
Sbjct: 76 DYGQCRLRVEFP----RTYGGRGGWPRGGRNGPPTR--------------RSDFRVLVSG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
L SWQDLKD MR+ G+VCYAD R G+VE+ DM+ AL KL + + +
Sbjct: 118 LPPSGSWQDLKDHMREAGDVCYADV--RKDGVGMVEYLRKEDMEYALRKLHDTKFH 171
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 96/177 (54%), Gaps = 7/177 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG + + LK G+ FVEF+D RDA+DA+ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIQGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
G R+ VE+A G RS + R + R D P+R S+ R++V
Sbjct: 69 DFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVT 128
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ ++ R GVV++ DMK A+ KLD+ E
Sbjct: 129 GLPSSASWQDLKDHMRKGGDVCFSQVYRDGRGTTGVVDYTCYEDMKYAVKKLDDTEF 185
>gi|170591727|ref|XP_001900621.1| SF2 [Brugia malayi]
gi|158591773|gb|EDP30376.1| SF2, putative [Brugia malayi]
Length = 298
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 110/224 (49%), Gaps = 26/224 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNG 59
+V++G LP V++RDLE YGRI + +K F F+EF+D RDA DAV+ +G
Sbjct: 7 CRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVPFAFIEFDDPRDARDAVHGRDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE+ +G+ GR YG R PP RS +R+IV
Sbjct: 67 YDFDGCRIRVELTRGVGPRGPGGRPLYGP----------DSRSPRRGPPPRRSGYRVIVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKD MR GE+CYAD + GVVE+ + DMK AL KLD+ +
Sbjct: 117 GLPDTGSWQDLKDHMRDAGEICYADVFR--DGTGVVEYTNYEDMKYALRKLDDTKF---- 170
Query: 180 IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSK 223
K G R + S +RSRSRS R RS K
Sbjct: 171 ------KSHEGEVTYIRVKEANINSPNRSRSRSHTPRKTRSSPK 208
>gi|426391711|ref|XP_004062211.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Gorilla gorilla gorilla]
gi|221043204|dbj|BAH13279.1| unnamed protein product [Homo sapiens]
Length = 135
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 58/70 (82%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKG 74
ERV VE A+G
Sbjct: 63 ERVIVEHARG 72
>gi|197692203|dbj|BAG70065.1| splicing factor arginine/serine-rich 6 [Homo sapiens]
gi|197692451|dbj|BAG70189.1| splicing factor arginine/serine-rich 6 [Homo sapiens]
Length = 135
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 58/70 (82%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKG 74
ERV VE A+G
Sbjct: 63 ERVIVEHARG 72
>gi|428170004|gb|EKX38933.1| hypothetical protein GUITHDRAFT_39633, partial [Guillardia theta
CCMP2712]
Length = 171
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 96/178 (53%), Gaps = 26/178 (14%)
Query: 8 IGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDA----VYELN 58
+G LP +RERD++ YGRIRD+ +K F FVEF++ DA+DA + +
Sbjct: 1 VGNLPLDIRERDIDDLFYKYGRIRDIEVKTPSRPPAFAFVEFDNLYDAEDAGMCALPCTD 60
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G R+ VE+++G + +RG G +APP R+ R RSD+R+I+
Sbjct: 61 GVMFEGARLRVEMSRGTAATYGYDKRGSG--KAPP--------RNLR-----RSDYRVII 105
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
L SWQDLKDF RQ GE+ Y D + + G+VEF + D A+ K D+ E +
Sbjct: 106 SGLPKSASWQDLKDFFRQAGEIVYTDVDR--QGGGIVEFANEDDRDYAIKKFDDTEFS 161
>gi|255936927|ref|XP_002559490.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584110|emb|CAP92139.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 301
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 23/185 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP V + D+E+ G G+I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMNGFGFIEYDDQLDARDIV--PDGSE 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
GER+TV+ A+G R + ++ P R P R+ R+ + L
Sbjct: 65 FKGERLTVQFARGPRRKE--------AFPGPSERNALPR--------PRRTIFRMQISGL 108
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ R + G VEFE+++D+K A++KLD E G +
Sbjct: 109 PE-TSWQDLKDFARQSGLDVVYSET-GREQGRGFVEFETANDLKTAVEKLDQREFKGSVV 166
Query: 181 RLIED 185
+ D
Sbjct: 167 SCVAD 171
>gi|359322752|ref|XP_003639909.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Canis lupus familiaris]
Length = 135
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 58/70 (82%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKG 74
ERV VE A+G
Sbjct: 63 ERVIVEHARG 72
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E YG I D+ LK G+ FVEFED DA A+ L+G
Sbjct: 8 LYVGNLPGDIRVREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAIRGLDGY 67
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ R+ VE+A G GRR + +P R GPP SD+R++V
Sbjct: 68 NFDACRLRVELAHG-------GRR----HSSPVDRYSSYSGSSGSRGPPKHSDYRVLVSG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ + R G+V++ + DMK A+ KLD++E
Sbjct: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLDDSEF 172
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 16/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG+I D+ LK G+ FVEFED RDA++A+ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE A G G G+ + G+G R G S++R++V
Sbjct: 69 NFDGHRLRVEAAHG----------GRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTG 118
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD+ E
Sbjct: 119 LPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEF 174
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 93/181 (51%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED +DA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPQDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + + G G G PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V L SWQDLKD MR+ G+VCYAD ++ G VEF DM A+ KLDN +
Sbjct: 122 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGAVEFVRKEDMTYAVRKLDNTK 179
Query: 175 L 175
Sbjct: 180 F 180
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 16/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG+I D+ LK G+ FVEFED RDA++A+ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE A G G G+ + G+G R G S++R++V
Sbjct: 69 NFDGHRLRVEAAHG----------GRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTG 118
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD+ E
Sbjct: 119 LPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEF 174
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
Length = 298
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 102/195 (52%), Gaps = 18/195 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VRE +++ YGRI D+ LK G+ F+EF+D RDA+DA+ +G
Sbjct: 8 IYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGY 67
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT----RSDHRL 116
G R+ VE A S RG YG R RG G G RS++R+
Sbjct: 68 VFDGHRLRVEFA----HSGGRGHPSYGGDRHSNSYRGGGGGGGGGGGGGRGVSRRSEYRV 123
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAE- 174
+V L S SWQDLKD MR G+VC+A + G+V+F + DMK A+ KLD+ E
Sbjct: 124 VVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNAIRKLDDTEF 183
Query: 175 ---LNGRRIRLIEDK 186
+ IR+ EDK
Sbjct: 184 RNPFSHSYIRVREDK 198
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG + + LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G + VE+A G RS R Y G GP RS++R++V
Sbjct: 69 DFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGG--GDGGGRERGPSRRSEYRVVVSG 126
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALD 168
L S SWQDLKD MR+ GEVC++ + R G+V++ S DMK ALD
Sbjct: 127 LPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYALD 175
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 18/174 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG I D+ LK G+ FVEFED RDA+DA+Y +G
Sbjct: 9 VYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G G ++ + R G S++R++V
Sbjct: 69 NFDGHRLRVELAHG------------GRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNA 173
L SWQDLKD MR+ G+VC++ + R G+V++ + DMK A+ KLD++
Sbjct: 117 LPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDS 170
>gi|147855944|emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
Length = 282
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 18/174 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG I D+ LK G+ FVEFED RDA+DA+Y +G
Sbjct: 9 VYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G G ++ + R G S++R++V
Sbjct: 69 NFDGHRLRVELAHG------------GRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNA 173
L SWQDLKD MR+ G+VC++ + R G+V++ + DMK A+ KLD++
Sbjct: 117 LPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDS 170
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
Length = 288
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 102/195 (52%), Gaps = 18/195 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VRE +++ YGRI D+ LK G+ F+EF+D RDA+DA+ +G
Sbjct: 8 IYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGY 67
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT----RSDHRL 116
G R+ VE A S RG YG R RG G G RS++R+
Sbjct: 68 VFDGHRLRVEFA----HSGGRGHPSYGGDRHSNSYRGGGGGGGGGGGGGRGVSRRSEYRV 123
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAE- 174
+V L S SWQDLKD MR G+VC+A + G+V+F + DMK A+ KLD+ E
Sbjct: 124 VVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNAIRKLDDTEF 183
Query: 175 ---LNGRRIRLIEDK 186
+ IR+ EDK
Sbjct: 184 RNPFSHSYIRVREDK 198
>gi|296412014|ref|XP_002835723.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629512|emb|CAZ79880.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 24/208 (11%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
GT++Y+G L R++++E F K G G + ++ L NGFGF++++ DA D V +G+
Sbjct: 7 GTRLYLGNLHKDARKQEVEDFFKEHGSGNVVEIKLMNGFGFIQYDSEADAKDVVPAYHGR 66
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G+ +TV+ A+G R P + D + P R+ R+ +
Sbjct: 67 DFKGQPLTVQFARGS--------------RHNPRHHDFPGGADRTFPRPRRTAFRMNISG 112
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L+ SWQDLKDF R+ G +V +++ + G+VEFE+ D+++A+ LD E G +
Sbjct: 113 LNPDTSWQDLKDFARKSGSDVVFSEVTRERDGRGMVEFETHDDLRRAVAFLDRTEFKGTQ 172
Query: 180 IRLI------EDKPRGGGRGRSRSSSSR 201
+ D PRG G GR RS S R
Sbjct: 173 VSCTPDVLADHDVPRGHGPGR-RSVSPR 199
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 18/174 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG I D+ LK G+ FVEFED RDA+DA+Y +G
Sbjct: 9 VYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ + + G G S++R++V
Sbjct: 69 NFDGHRLRVELAHG-----GRGQSSSVDHYSSYSSSSRG-------GLSRHSEYRVLVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNA 173
L SWQDLKD MR+ G+VC++ + R G+V++ + DMK A+ KLD++
Sbjct: 117 LPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDS 170
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 96/181 (53%), Gaps = 15/181 (8%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNG 59
++Y+G LP VR+ D++ YG+I V LK G F FVEFED RDADDAVY +G
Sbjct: 6 CRIYVGNLPPEVRQEDIKDVFYKYGKIIHVDLKIGRGPPFAFVEFEDKRDADDAVYGRDG 65
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
+L G R+ VE +G R G G R G P RS++R++V
Sbjct: 66 YTLDGYRLRVEFPRGSARGGYGRSGGGGGGGGGARRGG---------APSRRSEYRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKD MR+ G+VC+AD + GVVEF DMK A+ LD+++
Sbjct: 117 GLPPTGSWQDLKDHMREAGDVCFADVFR--DGTGVVEFLRYDDMKYAVKHLDDSKFRSHE 174
Query: 180 I 180
+
Sbjct: 175 V 175
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 112 SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKL 170
+D R+ V NL V +D+KD + G++ + D R VEFE D A+
Sbjct: 4 NDCRIYVGNLPPEVRQEDIKDVFYKYGKIIHVDLKIGRGPPFAFVEFEDKRDADDAVYGR 63
Query: 171 DNAELNGRRIRLIEDKPRG 189
D L+G R+R+ + PRG
Sbjct: 64 DGYTLDGYRLRV--EFPRG 80
>gi|393911086|gb|EJD76160.1| hypothetical protein LOAG_16828 [Loa loa]
Length = 407
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+G++VY+G L Y ERD+E+F +GYGRI +++LKNG+ FVEF D RDA+DAV++LNG+S
Sbjct: 1 MGSRVYVGRLSYRAHERDIERFFRGYGRITEILLKNGYAFVEFSDRRDAEDAVHDLNGRS 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGY 86
LLG+RV V+ AK S+ RGR Y
Sbjct: 61 LLGDRVIVQNAK----SRPRGRDMY 81
>gi|451847680|gb|EMD60987.1| hypothetical protein COCSADRAFT_163394 [Cochliobolus sativus
ND90Pr]
Length = 340
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E + G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+ V+ A+G E P R+ +R+ + NL
Sbjct: 67 FMGERLIVQFARGSRARNENFTPHERVPPR-----------------PRRTPYRMRIANL 109
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ + G VE+E+++D+K A++KLD E G+ +
Sbjct: 110 PVETSWQDLKDFARQSGLDVVYSEVGRERDGTGFVEYETAADLKTAVEKLDRREFKGQEV 169
Query: 181 RLIED 185
I+D
Sbjct: 170 TCIQD 174
>gi|1049084|gb|AAA93071.1| SRp55-2 [Homo sapiens]
Length = 135
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 57/70 (81%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKG 74
E V VE A+G
Sbjct: 63 EHVIVEHARG 72
>gi|426232112|ref|XP_004010078.1| PREDICTED: uncharacterized protein LOC101116481 [Ovis aries]
Length = 233
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 58/70 (82%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKG 74
ERV VE A+G
Sbjct: 63 ERVIVEHARG 72
>gi|21358097|ref|NP_652611.1| SF2, isoform A [Drosophila melanogaster]
gi|386765902|ref|NP_001247139.1| SF2, isoform B [Drosophila melanogaster]
gi|194901262|ref|XP_001980171.1| GG20059 [Drosophila erecta]
gi|195349404|ref|XP_002041235.1| GM15444 [Drosophila sechellia]
gi|7243684|gb|AAF43413.1|AF232773_1 SR family splicing factor SF2 [Drosophila melanogaster]
gi|7331146|gb|AAF60294.1|AF234157_1 SR family splicing factor [Drosophila melanogaster]
gi|7300132|gb|AAF55300.1| SF2, isoform A [Drosophila melanogaster]
gi|15292149|gb|AAK93343.1| LD40489p [Drosophila melanogaster]
gi|190651874|gb|EDV49129.1| GG20059 [Drosophila erecta]
gi|194122840|gb|EDW44883.1| GM15444 [Drosophila sechellia]
gi|220946268|gb|ACL85677.1| SF2-PA [synthetic construct]
gi|220955952|gb|ACL90519.1| SF2-PA [synthetic construct]
gi|383292748|gb|AFH06457.1| SF2, isoform B [Drosophila melanogaster]
Length = 255
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 94/184 (51%), Gaps = 28/184 (15%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 60 KSLLGERVTVEIAKGI--------DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR 111
G R+ VE +G +R+ G PP + R
Sbjct: 67 YDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAK--------------R 112
Query: 112 SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLD 171
S +R++V L + SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD
Sbjct: 113 SQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYK--DGSGVVEFLRHEDMKYAIKKLD 170
Query: 172 NAEL 175
++
Sbjct: 171 DSRF 174
>gi|195501014|ref|XP_002097620.1| GE26323 [Drosophila yakuba]
gi|194183721|gb|EDW97332.1| GE26323 [Drosophila yakuba]
Length = 254
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 94/184 (51%), Gaps = 28/184 (15%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 60 KSLLGERVTVEIAKGI--------DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR 111
G R+ VE +G +R+ G PP + R
Sbjct: 67 YDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAK--------------R 112
Query: 112 SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLD 171
S +R++V L + SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD
Sbjct: 113 SQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYK--DGSGVVEFLRHEDMKYAIKKLD 170
Query: 172 NAEL 175
++
Sbjct: 171 DSRF 174
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 93/187 (49%), Gaps = 39/187 (20%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RE+++E YGRI + LK G+ FVEFED DA DA+ +G
Sbjct: 9 VYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDR-DDRYGPPTRS------- 112
G R+ VE+A G G GH +DRY S
Sbjct: 69 DFDGHRLRVELAHG----------------------GRGHSSSNDRYSSHGGSRGGRGVS 106
Query: 113 ---DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALD 168
D+R++V L S SWQDLKD MR+ G+VC++ + G+V++ + DMK A+
Sbjct: 107 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIK 166
Query: 169 KLDNAEL 175
KLD++E
Sbjct: 167 KLDDSEF 173
>gi|334327169|ref|XP_003340840.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 9-like [Monodelphis domestica]
Length = 220
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 91/176 (51%), Gaps = 28/176 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+ LP VRE+DLE YGRIRD+ LKN F FV FED RDA+DA+Y NG
Sbjct: 17 RIYVENLPADVREKDLEDLFYKYGRIRDIELKNRRGLAPFAFVRFEDPRDAEDAIYGRNG 76
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE+ + RGR G S RS+ R++V
Sbjct: 77 YDYGQCRLRVELPRNPGGGGPRGRTGPPS---------------------RRSEFRVLVS 115
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G VCYAD K GVVEF DM+ AL +LD+++
Sbjct: 116 GLPPSGSWQDLKDHMREAGGVCYADVQK--DGMGVVEFLRKEDMEYALRRLDDSKF 169
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 99/204 (48%), Gaps = 31/204 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG------FGFVEFEDYRDADDAVYELN 58
K+Y+G LP + RD+E YG I + LK G F FVEFED DA DAV +
Sbjct: 11 KIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRD 70
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G + G + VE+ R P R + GP RSD R+IV
Sbjct: 71 GYNFDGYALRVELP-----------------RTGVPERRFNRGGGGASGPSRRSDFRVIV 113
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
L SWQDLKD MR+ G+V YAD + GVVEF DMK A+ +LD+++
Sbjct: 114 TGLPPTGSWQDLKDHMREAGDVGYADVFRD--GTGVVEFLRYEDMKYAIRRLDDSKFRSH 171
Query: 179 R-----IRLIEDKPRGGGRGRSRS 197
IR+ E++ GG R RSRS
Sbjct: 172 EGESSYIRVREERA-GGSRSRSRS 194
>gi|384950064|gb|AFI38637.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 89/176 (50%), Gaps = 30/176 (17%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LK F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
R+ VE R+ R PP R RSD R++V
Sbjct: 75 YDYGQCRLRVEFP----RTYGGRGGWPRGGRNGPPTR--------------RSDFRVLVS 116
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 117 G-----SWQDLKDHMREAGDVCYADVQK--DGVGMVEYLRKEDMEYALRKLDDTKF 165
>gi|448878356|gb|AGE46141.1| arginine/serine-rich splicing factor SR32 transcript II [Sorghum
bicolor]
Length = 322
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 97/176 (55%), Gaps = 15/176 (8%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAEDAIAGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE A G GR SY G R G S++R++V
Sbjct: 69 NFDGHRLRVEAAHG-------GRGNTSSYDRSSGFGG--GGGGARRGVSRHSEYRVLVTG 119
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKR-HRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD+ E
Sbjct: 120 LPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEF 175
>gi|380482542|emb|CCF41176.1| pre-mRNA splicing factor [Colletotrichum higginsianum]
Length = 312
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 100/185 (54%), Gaps = 19/185 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMNGFGFIEYKDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+TV+ A+G R +E G G + + P R+ HR+ + L
Sbjct: 65 FMGERLTVQFARGT-RHREGGSAA-------------GFNNERAPPRPRRTPHRMQITGL 110
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+ SWQDLKDF RQ +V Y++ + G VEFE+++D++ A++KLD E G R+
Sbjct: 111 PTDTSWQDLKDFARQSSLDVVYSETGRDGNGRGFVEFETAADLRTAVEKLDGREFKGSRV 170
Query: 181 RLIED 185
+ D
Sbjct: 171 TCVAD 175
>gi|310798588|gb|EFQ33481.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 312
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 19/185 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMNGFGFIEYKDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+TV+ A+G R +E G AP G + + P R+ HR+ + L
Sbjct: 65 FMGERLTVQFARGT-RHREGGS-------AP------GFNNERAPPRPRRTPHRMQITGL 110
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+ SWQDLKDF RQ +V Y++ + G VEFE+++D++ A++KLD E G R+
Sbjct: 111 PTDTSWQDLKDFARQSSLDVVYSETGRDGNGRGFVEFETAADLRTAVEKLDGREFKGSRV 170
Query: 181 RLIED 185
+ D
Sbjct: 171 ICVAD 175
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 96/177 (54%), Gaps = 7/177 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVYELNGK 60
V++G LP VRER++E YGRIR V LK G F FVEFED RDA DAV +G
Sbjct: 1 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGI 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD-DRYGPPTRSDHRLIVE 119
G+R+ VEI+ G G G G G + YGP R+D+R+IV
Sbjct: 61 EFQGQRLRVEISHGRRGGFGGGGGGGGGGGYGGGGGGGYGGGGPNPYGPSRRTDYRVIVT 120
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ GEV ++ + R G++++ + DM+ AL KLD +E
Sbjct: 121 GLPISSSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDYATREDMETALRKLDGSEF 177
>gi|330941512|ref|XP_003306066.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
gi|311316625|gb|EFQ85835.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
Length = 342
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E + G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSD 66
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+ V+ A+G E P R+ +R+ + NL
Sbjct: 67 FMGERLIVQFARGSRARNENFTPHERVPPR-----------------PRRTPYRMRIANL 109
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ + G VE+E+++D+K A++KLD E G+ +
Sbjct: 110 PVETSWQDLKDFARQSGLDVVYSEVGRERDGTGFVEYETAADLKAAVEKLDRREFKGQEV 169
Query: 181 RLIED 185
++D
Sbjct: 170 TCVQD 174
>gi|90075970|dbj|BAE87665.1| unnamed protein product [Macaca fascicularis]
Length = 177
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 58/70 (82%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ +V LKNG+GFVEFED RDADDAVYELNGK L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 65 ERVTVEIAKG 74
ERV VE A+G
Sbjct: 63 ERVIVEHARG 72
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 80/125 (64%), Gaps = 7/125 (5%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G + RERD+EKF KGYG++R+V LKNG+GFVEFED+RDADDAV +L+GK + G
Sbjct: 7 RLYLGNISDDTRERDVEKFFKGYGKLREVALKNGYGFVEFEDHRDADDAVQDLDGKDMNG 66
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT-RSDHRLIVENLSS 123
RV VE A+ R + R Y++ + PP R+ +R+ VENLS+
Sbjct: 67 SRVRVEFARS-PREKRNSR-----YQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLST 120
Query: 124 RVSWQ 128
R SWQ
Sbjct: 121 RTSWQ 125
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 114 HRLIVENLSSRVSWQDLKDFMRQVG---EVCYADAHKRHRNEGVVEFESSSDMKKALDKL 170
HRL + N+S +D++ F + G EV + + G VEFE D A+ L
Sbjct: 6 HRLYLGNISDDTRERDVEKFFKGYGKLREVALKNGY------GFVEFEDHRDADDAVQDL 59
Query: 171 DNAELNGRRIRL 182
D ++NG R+R+
Sbjct: 60 DGKDMNGSRVRV 71
>gi|358387407|gb|EHK25002.1| hypothetical protein TRIVIDRAFT_145450 [Trichoderma virens Gv29-8]
Length = 311
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 101/185 (54%), Gaps = 23/185 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKF--VKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I +V L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRHATKADVEAHFATHGTGEITEVKLMNGFGFIEYKDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+TV+ A+G R R G G GH+R R+ HR+ + L
Sbjct: 65 FMGERLTVQFARGT-----RHREG-----------GMGHERAPPRP--RRTPHRMQITGL 106
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
+ SWQDLKDF RQ +V Y++ + G VEFE+++D++ A++KLD E G R+
Sbjct: 107 PNDTSWQDLKDFARQSSLDVVYSETGRDSNGRGFVEFETAADLRTAVEKLDGREFKGSRV 166
Query: 181 RLIED 185
+ + D
Sbjct: 167 QCLVD 171
>gi|119187025|ref|XP_001244119.1| hypothetical protein CIMG_03560 [Coccidioides immitis RS]
Length = 398
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 22/186 (11%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
G + L + V ++D+E+ G G+I D+ L +GFGF+E+ED DA D V +G
Sbjct: 104 GHGFFAWTLLFPVTKQDVEEHFNQHGSGKITDIKLMSGFGFIEYEDALDARDVV--PDGT 161
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+TV+ A+G R +E AP PRR + +R+ +
Sbjct: 162 DFKGSRLTVQFARG-PRHKETFSGPSDRSNAPRPRR---------------TPYRMQISG 205
Query: 121 LSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKDF RQ G +V Y++ + H G VEFE+ +D+K A++KLD E G R
Sbjct: 206 LPE-TSWQDLKDFARQSGLDVVYSETLRDHEGRGFVEFETGADLKTAIEKLDGREFKGSR 264
Query: 180 IRLIED 185
+ +D
Sbjct: 265 VTCTQD 270
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 96/177 (54%), Gaps = 13/177 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
+VY+G LP V+ RD+E YG I+ + + N F F+EFED RDA DAVY +G
Sbjct: 12 CRVYVGNLPQFVKNRDIEDLFDKYGPIKAIDIHNRFDPAFAFLEFEDPRDASDAVYGKDG 71
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
+ G+R+ V+ + +ER G + G+ R GPP R S++R++V
Sbjct: 72 ERFEGQRIRVQFPRNSAAGRERTESGSNNNGGG------GYVRGRGRGPPIRRSENRVLV 125
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ GEV YAD +K V EF + DMK A+ LD+++
Sbjct: 126 SGLPPTGSWQDLKDHMREAGEVLYADVYK--DGTAVCEFANYEDMKWAVKYLDDSKF 180
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 89/176 (50%), Gaps = 29/176 (16%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G L YGV DL K +G I D+ +K+ + FVEF +AD+A LN
Sbjct: 4 RLYVGNLEYGVENDDLSKLFGQFGEITDIAIKDRGQGAVYAFVEFSKEEEADNAQSSLNS 63
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
+G + VE +G+ S RRG PP R+D+R+ V
Sbjct: 64 THFMGRDIRVEYTRGLRYS-----------TGDSIRRG----------PPRRTDYRIEVT 102
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
+L SWQDLKD+M ++G V Y D RH GVVEF DMK+A+ KLD+ ++
Sbjct: 103 HLPHNCSWQDLKDYMSRIGPVGYCDI--RH-GYGVVEFIHYEDMKRAVRKLDDTKM 155
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 93/170 (54%), Gaps = 8/170 (4%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG + + LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G + VE+A G RS R Y RG G GP RS++R++V
Sbjct: 69 DFDGHHLRVELAHGGRRSSHDARGSYSGRGRG--GRGGGDGGGRERGPSRRSEYRVVVSG 126
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDK 169
L S SWQDLKD MR+ GEVC++ + R G+V++ S DMK A+ K
Sbjct: 127 LPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKK 176
>gi|156082103|ref|XP_001608544.1| pre-mRNA splicing factor [Plasmodium vivax Sal-1]
gi|148801115|gb|EDL42520.1| pre-mRNA splicing factor, putative [Plasmodium vivax]
Length = 544
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 93/182 (51%), Gaps = 29/182 (15%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN--------GFGFVEFEDYRDADDA 53
+ + +Y+G LP V E ++ +GRI+ + +K F FV + D RDA+ A
Sbjct: 11 ISSCIYVGNLPGNVVEDEVYDLFAKFGRIKYIDVKKPRAPGVPYSFAFVHYFDSRDAEYA 70
Query: 54 VYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSD 113
+ +G G R+ VE + G ++S YG YR +++ GPP R++
Sbjct: 71 IDRRDGYKYDGVRLRVEYS-GENKS-------YGKYRK----------KEEGAGPPVRTE 112
Query: 114 HRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
HR+I+ NL WQ LKD MRQ G+V YA+ R GVVEF S DM A++K D +
Sbjct: 113 HRIIISNLPESCKWQHLKDVMRQCGDVGYANI---ERGRGVVEFISRDDMLYAIEKFDGS 169
Query: 174 EL 175
E
Sbjct: 170 EF 171
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 92/178 (51%), Gaps = 25/178 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV+ +G
Sbjct: 8 CRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFEDPRDADDAVHARDG 67
Query: 60 KSLLGERVTVEIA----KGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
G R+ VE G R G S R PP R RS R
Sbjct: 68 YDYDGYRLRVEFPRGGGHGSFRGGRGGGDRGRSSRGPPAR---------------RSQFR 112
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
++V L SWQDLKD MR+ G+VC+ADA K GVVEF DMK A+ KLD++
Sbjct: 113 VLVTGLPPSGSWQDLKDHMREAGDVCFADAFK--DGSGVVEFLRYEDMKYAIKKLDDS 168
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALD 168
+R+D R+ V NL + +D++D + G+V + D ++R VEFE D A+
Sbjct: 4 SRNDCRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFEDPRDADDAVH 63
Query: 169 KLDNAELNGRRIRL 182
D + +G R+R+
Sbjct: 64 ARDGYDYDGYRLRV 77
>gi|341902095|gb|EGT58030.1| CBN-RSP-3 protein [Caenorhabditis brenneri]
Length = 275
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 93/186 (50%), Gaps = 32/186 (17%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNG 59
K+Y+G +P + D+ + YGR+ V +KNG F FV + D+RDADDAV L+
Sbjct: 7 AKLYVGNIPEDATKEDIYDLFETYGRVLYVDIKNGKISRFAFVAYRDFRDADDAVNYLDK 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYG----------SYRAPPPRRGWGHDRDDRYGPP 109
G + VE + G+ G RG+G ++R RG G GP
Sbjct: 67 FDYHGRSLRVEHSTGV------GPRGWGGQPLSSINGDNFRIA---RGPG-------GPQ 110
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDK 169
RSD R+ VE + SWQDLKD R GE+C+A H G+VEFE S +++++D
Sbjct: 111 RRSDFRVFVEGIPQTGSWQDLKDHFRPAGEICFAMI--SHNKTGIVEFEKKSSVQRSIDI 168
Query: 170 LDNAEL 175
D E
Sbjct: 169 FDKTEF 174
>gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
gi|297321802|gb|EFH52223.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
Length = 301
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 97/178 (54%), Gaps = 9/178 (5%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI D+ LK + FVEFE RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIREHEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERG--RRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
+ G R+ VE+A G R Q R GYG G G R+G S+ R+IV
Sbjct: 69 NFDGCRLRVELAHG-GRGQSSSDRRGGYGGGGGGGYGGGGGGGGSARFGVSRHSEFRVIV 127
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + GVV++ + DMK A+ KLD+ E
Sbjct: 128 RGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEF 185
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 99/176 (56%), Gaps = 10/176 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIR--DVILKNG--FGFVEFEDYRDADDAVYELNG 59
+++YIG LP V++RDLE YGRI D+ L G F F+EF+D RDA DAV+ +G
Sbjct: 7 SRIYIGNLPSDVKQRDLEDLFYKYGRINYIDIKLSRGAPFAFIEFDDPRDARDAVHGRDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
+ G R+ VE+ +G+ GR Y S R R PP RS +R+IV
Sbjct: 67 YDMDGCRIRVEMTRGVGPRGPGGRPLYASERDRDRRPPPAPRG----PPPRRSGYRVIVS 122
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR G++CYAD ++ GVVE+ DMK A+ KLD+ +
Sbjct: 123 GLPSSGSWQDLKDHMRDAGDICYADVYR--DGTGVVEYTKYDDMKYAIRKLDDTKF 176
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAH-KRHRNEGVVEFESSSDMKKALD 168
+R + R+ + NL S V +DL+D + G + Y D R +EF+ D + A+
Sbjct: 3 SRRESRIYIGNLPSDVKQRDLEDLFYKYGRINYIDIKLSRGAPFAFIEFDDPRDARDAVH 62
Query: 169 KLDNAELNGRRIRL 182
D +++G RIR+
Sbjct: 63 GRDGYDMDGCRIRV 76
>gi|356505580|ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Glycine max]
Length = 326
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG I + LK G+ FVEFED +DA+DA+ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE A G R R Y S+ + G RS++R++V
Sbjct: 69 DFDGHRLRVEPAHG-GRGHSSSRDRYNSHS----------NGRGGRGVSRRSEYRVLVSG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ H G+V++ + DMK A+ KLD++E
Sbjct: 118 LPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEF 173
>gi|70945413|ref|XP_742529.1| pre-mRNA splicing factor [Plasmodium chabaudi chabaudi]
gi|56521563|emb|CAH75989.1| pre-mRNA splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 373
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-------NGFGFVEFEDYRDADDAVYELN 58
+Y+G LP V E ++ YGRI+ + +K + FV + D +DA+ A+ +
Sbjct: 13 IYVGNLPGNVLEDEVYDLFGKYGRIKYIDIKLTRGSSSTAYAFVHYYDIKDAEYAIERRD 72
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G GER+ VE + G ++S +G YR ++D GPP R++HR+IV
Sbjct: 73 GYKFDGERLRVEFS-GENKS-------FGKYRR----------KEDGIGPPLRTEHRIIV 114
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
NL WQ LKD MRQ G+V YA+ +G+VEF M A++K D AE
Sbjct: 115 SNLPDNCKWQHLKDIMRQCGDVGYANI---EHGKGIVEFVDRDGMLYAIEKFDRAEF 168
>gi|358054464|dbj|GAA99390.1| hypothetical protein E5Q_06087 [Mixia osmundae IAM 14324]
Length = 392
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 101/203 (49%), Gaps = 28/203 (13%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRD---VILKNGF----GFVEFEDYRDADDAVYEL 57
+VY+G L Y VR DL+ F + G++ + ++ NG G +EFE DA A+ EL
Sbjct: 79 RVYVGNLSYQVRHADLKDFARDVGKVVNAEVLMTPNGMSKGCGLIEFETEGDARRAIKEL 138
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-----PTRS 112
N SLLG V V + D G R RG R + P P++
Sbjct: 139 NESSLLGRPVFVREDRVDDPHPGGGARSV---------RGLVFPRSGAFAPSGGAPPSK- 188
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK----RHRNEGVVEFESSSDMKKALD 168
+LIV LS V WQDLKD R+ G+V AD H R R G+V F S+ D + A++
Sbjct: 189 --QLIVSGLSDAVGWQDLKDLFRECGDVIRADVHLDEDGRPRGSGMVLFSSAGDARAAIE 246
Query: 169 KLDNAELNGRRIRLIEDKPRGGG 191
+ D E+NG ++ + ED+ RG G
Sbjct: 247 QFDGMEINGMKLTVKEDRVRGSG 269
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKKALD 168
+HR+ V NLS +V DLKDF R VG+V A+ + + G++EFE+ D ++A+
Sbjct: 77 EHRVYVGNLSYQVRHADLKDFARDVGKVVNAEVLMTPNGMSKGCGLIEFETEGDARRAIK 136
Query: 169 KLDNAELNGRRIRLIEDK---PRGGGRGRS 195
+L+ + L GR + + ED+ P GG RS
Sbjct: 137 ELNESSLLGRPVFVREDRVDDPHPGGGARS 166
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVILKN-----GFGFVEFEDYRDADDAVYEL 57
++ + GL V +DL+ + G + DV L G G V F DA A+ +
Sbjct: 189 QLIVSGLSDAVGWQDLKDLFRECGDVIRADVHLDEDGRPRGSGMVLFSSAGDARAAIEQF 248
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGW---------------GHDR 102
+G + G ++TV +E RG G PP RG G R
Sbjct: 249 DGMEINGMKLTV---------KEDRVRGSG-----PPTRGAYPVRGGRGGGGSFGSGEPR 294
Query: 103 DDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK---RHRNEGVVEFES 159
DR+ S ++ V+NL + +DL + + VG V +A+A + R + GVVEF +
Sbjct: 295 PDRFANIDPSP-QIFVKNLPWSTANEDLVELFQTVGTVLHAEATQENGRAKGTGVVEFAT 353
Query: 160 SSDMKKALDKLDNAELNGRRIRL 182
+ D + A+ K GR + L
Sbjct: 354 ADDAQTAITKFQGYSYGGRPLVL 376
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 102/177 (57%), Gaps = 7/177 (3%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
+GT+VY+GGLP R+++ YG + ++ + +N GF FV+FED RDADDA+ ++
Sbjct: 1 MGTRVYVGGLPRDATSREIQDGFNRYGHVSNIWVARNPPGFAFVDFEDPRDADDAIRSMD 60
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G+ LG R+ VE+A+G R GRRG R G DR PP R+D+R+ V
Sbjct: 61 GRDFLGGRIRVELARGGSRRDGGGRRGDDDRGGYGGRGGDRFDR--GRNPPQRTDYRVRV 118
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
+L V W+++KDF+R GEV Y + + EF++ DM+ A+ KLD+ E
Sbjct: 119 TDLPRDVDWRNVKDFLRTGGEVTYCNIEA--DGSAIAEFQTKDDMEDAIKKLDDTEF 173
>gi|12860555|dbj|BAB31986.1| unnamed protein product [Mus musculus]
Length = 190
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 83/155 (53%), Gaps = 27/155 (17%)
Query: 27 YGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQER 81
YGRIR++ LKN F FV FED RDA+DA+Y NG R+ VE
Sbjct: 6 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFP--------- 56
Query: 82 GRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVENLSSRVSWQDLKDFMRQVGEV 140
R YG R GW R R GPPTR SD R++V L SWQDLKD MR+ G+V
Sbjct: 57 --RTYGG------RGGW--PRGARNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDV 106
Query: 141 CYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
CYAD K G+VE+ DM+ AL KLD+ +
Sbjct: 107 CYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKF 139
>gi|83273559|ref|XP_729451.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich 4 [Plasmodium yoelii yoelii]
Length = 516
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-------NGFGFVEFEDYRDADDAVYELN 58
+Y+G LP V E ++ +GRI+ + +K + FV + D +DA+ A+ +
Sbjct: 14 IYVGNLPGNVLEDEVYDLFGKFGRIKYIDIKLTRGSSSTAYAFVHYYDIKDAEYAIERRD 73
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G GER+ VE + G ++S +G YR ++D GPP R++HR+IV
Sbjct: 74 GYKFDGERLRVEFS-GENKS-------FGKYRR----------KEDGIGPPLRTEHRIIV 115
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
NL WQ LKD MRQ G+V YA+ +G+VEF M A++K D AE
Sbjct: 116 SNLPDNCKWQHLKDIMRQCGDVGYANI---EHGKGIVEFVDRDGMLYAIEKFDRAEF 169
>gi|195451089|ref|XP_002072763.1| GK13511 [Drosophila willistoni]
gi|194168848|gb|EDW83749.1| GK13511 [Drosophila willistoni]
Length = 263
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEFED RDADDAV +G
Sbjct: 7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT-RSDHRLIV 118
G R+ VE R G G+ G G R GPP RS +R++V
Sbjct: 67 YDYDGYRLRVEFP----RGGGPGSYRGGNRNDRNRDGGGGGGRMGGRGPPAKRSQYRVMV 122
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L + SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 123 TGLPTSGSWQDLKDHMREAGDVCFADTYK--DGSGVVEFLRHEDMKYAIKKLDDSRF 177
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 123/249 (49%), Gaps = 34/249 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
+++Y+G LP VR +D+E YGR+ V LK+ F FVEFED RDA+DAV +G
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGRVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE +G+ + G R Y S R R R+ +R+IV
Sbjct: 65 YDYEGYRLRVEFPRGL-GPRGPGGRPYDSGRNLSVSRSACGGGSSS--GSRRASYRVIVS 121
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L + SWQDLKD MR+ G+VCY D + G+VE+ DMK AL KLD+ +
Sbjct: 122 GLPASGSWQDLKDHMREAGDVCYTDVLR--DGTGIVEYGRYEDMKYALRKLDDTKFKSHE 179
Query: 180 -----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKA 234
IR+ ED G SR+ S+SRSP R+ GSP+ S S +
Sbjct: 180 GETSYIRVKEDN------GESRA--------------HSRSRSPVGRASRGSPQYSPSYS 219
Query: 235 KSVSRSPSP 243
S S S SP
Sbjct: 220 NSGSHSHSP 228
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIR--DVILKNG--FGFVEFEDYRDADDAVYELNG 59
+VYIG LP +R+RDLE YG I DV L G F F+EF+D RDA DA+ +G
Sbjct: 47 CRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAPFAFIEFDDPRDARDAIRGRDG 106
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
L G R+ VE+ +G+ GR YG P R GPP RS +R++V
Sbjct: 107 YELDGCRIRVEMTRGVGPRGPGGRPLYG-----PDRGERDRRPPPPRGPPRRSGYRVLVT 161
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G++CYAD K GVVE+ DMK A+ KLD+ +
Sbjct: 162 GLPVTGSWQDLKDHMREAGDICYADVFK--DGTGVVEYTRQDDMKYAIKKLDDTKF 215
>gi|431904517|gb|ELK09900.1| Splicing factor, arginine/serine-rich 5 [Pteropus alecto]
Length = 223
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 56/70 (80%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVE 70
L ERVT+E
Sbjct: 61 ELCSERVTIE 70
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 76 DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV----ENLSSRVSWQ-DL 130
++ ER +GYG R +RG+G + P +D + E S RV+ +
Sbjct: 17 EKDVERFFKGYGRIRDIDLKRGFGF---VEFEDPRDADDAVYELDGKELCSERVTIEHAR 73
Query: 131 KDFMRQVGEVCYAD--AHKRHRNE-GVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
G Y+D + +R RN+ VVEF S D+K A++KL E+NGR+I+LIE
Sbjct: 74 ARSRGGRGRGRYSDRFSSRRPRNDRRVVEFASYGDLKNAIEKLSGKEINGRKIKLIE 130
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 19/147 (12%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDA DA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G R P R + R G R+D+R++V
Sbjct: 69 DFDGHRLRVELAHGG--------------RGPSFDRSSSYSSAGRRGAAKRTDYRVMVTG 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK 147
L S SWQDLKD MR+ G+VC++D ++
Sbjct: 115 LPSSASWQDLKDHMRRAGDVCFSDVYR 141
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 100/176 (56%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDA++A +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE A G RG G S+ P G G R+ S++R++V
Sbjct: 69 NFDGHRLRVEPAHG-----GRGNGG-SSFDRPSNFGGGGRRGVSRH-----SEYRVLVTG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD++E
Sbjct: 118 LPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEF 173
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIR--DVILKNG--FGFVEFEDYRDADDAVYELNG 59
+VYIG LP +R+RDLE YG I DV L G F F+EF+D RDA DA+ +G
Sbjct: 7 CRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAPFAFIEFDDPRDARDAIRGRDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
L G R+ VE+ +G+ GR YG P R GPP RS +R++V
Sbjct: 67 YELDGCRIRVEMTRGVGPRGPGGRPLYG-----PDRGERDRRPPPPRGPPRRSGYRVLVT 121
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G++CYAD K GVVE+ DMK A+ KLD+ +
Sbjct: 122 GLPVTGSWQDLKDHMREAGDICYADVFK--DGTGVVEYTRQDDMKYAIKKLDDTKF 175
>gi|240848767|ref|NP_001155687.1| serine/arginine-rich splicing factor 1-like [Acyrthosiphon pisum]
gi|239789607|dbj|BAH71418.1| ACYPI006929 [Acyrthosiphon pisum]
Length = 244
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 97/177 (54%), Gaps = 7/177 (3%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D++ +G++ V LKN F FVEF+D RDA+DAV+ +G
Sbjct: 6 CRIYVGNLPPDIRTKDIQDLFYKFGKVLFVDLKNQRGPPFAFVEFDDPRDAEDAVHARDG 65
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIV 118
G R+ VE +G + G G S R G GPP R S +R++V
Sbjct: 66 YDYDGYRLRVEFPRGNGPHRSGGGGGSSSGGGSYNRGGASGGSGRSRGPPARRSQYRVLV 125
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L + SWQDLKD MR+ G+VCYAD +K GVVEF DMK A+ KLD++
Sbjct: 126 TGLPASGSWQDLKDHMREAGDVCYADVYK--DGSGVVEFLRYDDMKYAVRKLDDSRF 180
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 100/176 (56%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDA++A +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE A G RG G S+ P G G R+ S++R++V
Sbjct: 69 NFDGHRLRVEPAHG-----GRGNGG-SSFDRPSNFGGGGRRGVSRH-----SEYRVLVTG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD++E
Sbjct: 118 LPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEF 173
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
Length = 269
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 119/234 (50%), Gaps = 15/234 (6%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP ++E ++E YGRI D+ LK + FVEFE RDA+DA+ +G
Sbjct: 9 IYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG R G G R+G SD+R+I+
Sbjct: 69 NFDGCRLRVELAHG-----GRGPSSSSDRRGSYGSSGGGGGGGGRHGISRHSDYRVIIRG 123
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAELNG-- 177
L S SWQDLKD MR+ G+VC+A+ + G+V++ + DMK A+ KLD+ E
Sbjct: 124 LPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPW 183
Query: 178 --RRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRK 229
IR+ E K S SR+ KSR S SRSP +S+S SP K
Sbjct: 184 TRTYIRVREYKGSPSRSRSRSRSRSRTPRKSRRSPARSVSRSPPPKSRSASPVK 237
>gi|149043028|gb|EDL96602.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_c [Rattus
norvegicus]
Length = 95
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 57/70 (81%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L Y VRE+D+++F GYGR+ ++ LKNG+GFVEFED RDADDAVYELN K L G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 65 ERVTVEIAKG 74
ERV VE A+G
Sbjct: 63 ERVIVEHARG 72
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 98/187 (52%), Gaps = 36/187 (19%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELN 58
+V++G LP VRER+L + YGRI V +K F F+ +E+ +DA DAV +N
Sbjct: 2 ARVFVGNLPEDVRERELSDKFERYGRITSVRIKFPARPPPFAFLTYENEQDASDAVRSMN 61
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
+ G R+ VE+++GID ++ RG + +R+ +
Sbjct: 62 NTTFGGSRIRVEMSRGIDDARPRG-----------------------------TQYRVKI 92
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
L +SWQDLKDF+R+ G+V ++D +R G F + +M +A+ KLD +L+G
Sbjct: 93 SGLPDTMSWQDLKDFLRKGGDVVHSDVDRR--GNGSASFATPDEMLRAIRKLDGTDLDGE 150
Query: 179 RIRLIED 185
R+R+ ED
Sbjct: 151 RVRIRED 157
>gi|325182716|emb|CCA17171.1| splicing factor putative [Albugo laibachii Nc14]
Length = 224
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 29/184 (15%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
T +++G LP + E L+ +G+I + LK F F+E+E+ AD+AV E N
Sbjct: 2 TAIFVGNLPTEIDEETLQSHFSKHGQIACIRLKVPSRPPAFAFIEYEESSGADNAVRESN 61
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G LLG ++ VEI+ R G RD + +R+ V
Sbjct: 62 GIELLGSKIRVEIS----------------------RSGPNQTRDTSSNKRFGTQYRVTV 99
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
NLSS++SWQDLKDF R+ G+V + + H GV F + +M++A+ KLD +L+GR
Sbjct: 100 SNLSSKISWQDLKDFFRRGGDVVHTNVD--HSGSGVGSFATYDEMERAIRKLDRVKLDGR 157
Query: 179 RIRL 182
+R+
Sbjct: 158 TVRV 161
>gi|312077156|ref|XP_003141179.1| hypothetical protein LOAG_05594 [Loa loa]
Length = 214
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+G++VY+G L Y ERD+E+F +GYGRI +++LKNG+ FVEF D RDA+DAV++LNG+S
Sbjct: 1 MGSRVYVGRLSYRAHERDIERFFRGYGRITEILLKNGYAFVEFSDRRDAEDAVHDLNGRS 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGY 86
LLG+RV V+ AK S+ RGR Y
Sbjct: 61 LLGDRVIVQNAK----SRPRGRDMY 81
>gi|402581590|gb|EJW75538.1| splicing factor, partial [Wuchereria bancrofti]
Length = 212
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+G++VY+G L Y ERD+E+F +GYGRI +++LKNG+ FVEF D RDA+DAV++LNG+S
Sbjct: 1 MGSRVYVGRLSYRAHERDIERFFRGYGRITEILLKNGYAFVEFSDRRDAEDAVHDLNGRS 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGY 86
LLG+RV V+ AK S+ RGR Y
Sbjct: 61 LLGDRVIVQNAK----SRPRGRDMY 81
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 138/287 (48%), Gaps = 63/287 (21%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP RERD+E YG + + LK G+ F+EFE+ RDA+DA+ +G
Sbjct: 9 LYVGNLPVDFRERDIEDIFHKYGPVVKIDLKFPPRPPGYCFIEFENARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKG------IDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
+ G R+ VE+A G +DR Y S+ + G R+ R + D+
Sbjct: 69 DIDGHRLRVELAHGGRGALSVDR--------YSSFSS------GGGRRNGRLQ--SHCDY 112
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNA 173
R+ + L S SWQDLKD MR+ G+V +A + + GVV++ + DMK A+ KLD+
Sbjct: 113 RVTISGLPSSASWQDLKDHMRRAGDVTFAQVFRDSNGTTGVVDYTNYDDMKYAIRKLDDT 172
Query: 174 ELNG----RRIRLIEDKPRGGGRGRSRSSSSR----------------------SRSKSR 207
E IR+ E +G S SR SRS +
Sbjct: 173 EFKNPFSRSYIRVKEYGSKGSMSRSRSRSFSRSRSRSRSRSRSRSHSHSRTRSPSRSPNV 232
Query: 208 SRSRSSKSRSPRSRSKSGSPRKSKSKAKSVSRSPSPSKTRKRSRSRS 254
SR R S+ RSRS+SGS ++ +SK P P +T+ RSRSR+
Sbjct: 233 SR-RKVHSKPLRSRSRSGSMQRPRSK-------PVP-RTKSRSRSRT 270
>gi|225706140|gb|ACO08916.1| Splicing factor, arginine/serine-rich 4 [Osmerus mordax]
Length = 101
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 58/71 (81%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG L Y RE+D+EKF KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDLC 61
Query: 64 GERVTVEIAKG 74
GERV VE KG
Sbjct: 62 GERVIVEHTKG 72
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG + + LK G+ FVEFED RDADDA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G + VE+A G RS R Y G G R+ P RS++R++V
Sbjct: 69 DFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERG--PSRRSEYRVVVSG 126
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKAL--DKLDNAELNG 177
L S SWQDLKD MR+ GEVC++ + R G+V++ S DMK A+ K + G
Sbjct: 127 LPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAVRYKKSSMTQSFG 186
Query: 178 RRIRL----IEDKPRGGGRG 193
R + +E+ +GG RG
Sbjct: 187 MRFLMNMFGLENMIQGGIRG 206
>gi|406862976|gb|EKD16025.1| pre-mRNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 326
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 95/192 (49%), Gaps = 34/192 (17%)
Query: 24 VKGYGRIRDVILKNGFGFVEFEDYRDADDAV--------YELNGKSLLGERVTVEIAKGI 75
G G I ++ L NGFGF+E++D DA D V +G +GER+TV+ A+G
Sbjct: 42 THGTGEITEIKLMNGFGFIEYKDAMDARDVVPGMTAQQLQAFHGSDFMGERLTVQFARGT 101
Query: 76 DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMR 135
R R + + PR P R+ HR+ + L SWQDLKDF R
Sbjct: 102 -----RNRDTFAASERTAPR-------------PRRTPHRMQISGLPGETSWQDLKDFAR 143
Query: 136 QVG-EVCYADAHKRHRNEG-VVEFESSSDMKKALDKLDNAELNGRRIRLIEDK----PRG 189
Q +V Y++ + +G VEFE++ D+K A++KLD E G R+ I D PR
Sbjct: 144 QSSLDVVYSETGRDRDGKGSFVEFETALDLKTAVEKLDGREFKGVRVTCIADTQPDIPR- 202
Query: 190 GGRGRSRSSSSR 201
RGRSRS R
Sbjct: 203 -DRGRSRSPIPR 213
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 96/189 (50%), Gaps = 36/189 (19%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER +E YGRI D+ LK G+ FVEFED RDA+DA +G
Sbjct: 9 IYVGNLPGDIRERAVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT---------- 110
+ G R+ VE A G RG G G HDR +G
Sbjct: 69 NFDGNRLRVEPA--------HGGRGSG---------GPSHDRSGSFGGGGGAGGGSGRRG 111
Query: 111 ---RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKA 166
+D+R++V L S SWQDLKD MR+ G+VC+++ ++ G+ ++ + DMK A
Sbjct: 112 VSRHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVYREGGGTIGIADYTNYDDMKYA 171
Query: 167 LDKLDNAEL 175
+ KLD+ E
Sbjct: 172 IKKLDDTEF 180
>gi|52140006|gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 257
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 16/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG+I D+ LK G+ FVEFED RDA++A+ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE A G G G+ + G+G R G S++R++V
Sbjct: 69 NFDGHRLRVEAAHG----------GRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTG 118
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD+ E
Sbjct: 119 LPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEF 174
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 97/176 (55%), Gaps = 16/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI DV LK + FVEFE+ RDA+DA+ +G
Sbjct: 9 IYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G G G + R G G R+G S++R+IV
Sbjct: 69 NFDGCRLRVELAHG----------GRGQSSSSDRRGGHGSGGGGRFGVSRHSEYRVIVRG 118
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + G+V++ + DMK A+ KLD+ E
Sbjct: 119 LPSSASWQDLKDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAIRKLDDTEF 174
>gi|1049082|gb|AAB60405.1| SRp40-3 [Homo sapiens]
gi|1049090|gb|AAA93074.1| SRp40-2 [Homo sapiens]
gi|34364611|emb|CAE45711.1| hypothetical protein [Homo sapiens]
gi|49457330|emb|CAG46964.1| SFRS5 [Homo sapiens]
gi|49457360|emb|CAG46979.1| SFRS5 [Homo sapiens]
gi|189053126|dbj|BAG34748.1| unnamed protein product [Homo sapiens]
gi|197692201|dbj|BAG70064.1| splicing factor arginine/serine-rich 5 [Homo sapiens]
Length = 107
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 56/70 (80%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVE 70
L ERVT+E
Sbjct: 61 ELCSERVTIE 70
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 88/176 (50%), Gaps = 23/176 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D+E +G+I + LKN F FVEFED RDA+DA + +G
Sbjct: 8 CRIYVGNLPPDIRTKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFEDPRDAEDAAHARDG 67
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE +G + G G RS +R++V
Sbjct: 68 YDYDGYRLRVEFPRGSAPGRGGMGPGRGRGPPA-----------------RRSQYRVLVS 110
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD K GVVEF DMK A+ KLD++
Sbjct: 111 GLPPSGSWQDLKDHMREAGDVCYADVFK--DGTGVVEFLRYEDMKYAVKKLDDSRF 164
>gi|399218146|emb|CCF75033.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 109/226 (48%), Gaps = 50/226 (22%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-------FGFVEFEDYRDADDAVYELN 58
+++G LP + R++E +G IRD+ +K G + F+EF RDA+DAV +
Sbjct: 16 IFVGNLPEDITVREIENIFGKFGEIRDIDIKKGKTSNYTAYAFIEFYHMRDAEDAVESRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERG--RRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRL 116
G + R+ VE + G RS +G R Y Y TR++HRL
Sbjct: 76 GYNFDKYRLRVEFS-GRKRSGNQGDKLRRYNDY------------------SNTRTEHRL 116
Query: 117 IVENLSSRVSWQDLKDFMRQ---VGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
++ N+SS WQD+KD M++ VG VC D G VE+ + SDMK AL+K D +
Sbjct: 117 VISNISSSCRWQDIKDHMKRAGPVGHVCIKDG------RGYVEYINKSDMKYALEKYDGS 170
Query: 174 ELN--GRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRS 217
EL GR R+ + R RS S S RSR S S++
Sbjct: 171 ELQSAGRSYRI-----------KVRMDDHRSHSHSNERSRRSASQN 205
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++YIG LP V E+D++ +GRI D+ LK FGF+ F+D RDA++AV +
Sbjct: 2 ARIYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARD 61
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G + G R+ VEI++G G G+G P G G ++++R+IV
Sbjct: 62 GYDMDGSRLRVEISRGRRDPFGMGGGGHGGRMGMPMGGGRGGFGGRGGAGFQQTEYRVIV 121
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG- 177
L SWQDLKD MR+ GE Y D H+ G+V F + DM AL KLD ++
Sbjct: 122 TGLPPSASWQDLKDHMRKAGEPTYTDVD--HKGGGIVHFRTRDDMDYALRKLDGSDFRNP 179
Query: 178 ---RRIRLIEDKPRGGG 191
RI ++ + GGG
Sbjct: 180 FEKSRISVLPHRGVGGG 196
>gi|390336105|ref|XP_003724280.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 93/190 (48%), Gaps = 41/190 (21%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN------------------GFGFVEFE 45
++Y+G LP +RE+D+E +G + D+ LKN F FVEF
Sbjct: 16 CRIYVGNLPPDIREKDIEDMFYKFGSVADIDLKNKRPPSFSSSGSERERFGTPFAFVEFY 75
Query: 46 DYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDR 105
D RDADDAV +G + G R+ VE RG +G+ R P
Sbjct: 76 DRRDADDAVLARDGYNYDGYRIRVEFP--------RGTKGFKGSRPRGPPP--------- 118
Query: 106 YGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKK 165
RS +R+IV L S SWQDLKD MR+ G+VCYAD ++ GVVEF DMK
Sbjct: 119 ----RRSSYRVIVSGLPSTGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFLRPEDMKY 172
Query: 166 ALDKLDNAEL 175
A+ +LD+ +
Sbjct: 173 AVKQLDDTKF 182
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 96/181 (53%), Gaps = 25/181 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D+E YG IR + LKN F FVEF+D RDA+DAV +G
Sbjct: 8 CRIYVGNLPPDIRVKDIEDIFYKYGNIRHIDLKNKRGPPFAFVEFDDKRDAEDAVRGRDG 67
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
+ G R+ VE +G R RG R G P RS++R++V
Sbjct: 68 YNYDGYRLRVEFPRGTSRGGYRGGRRVGQ-------------------PSRRSEYRVLVS 108
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKD MR+ G+VCYAD + GVVEF + DMK A+ +LD+++
Sbjct: 109 GLPPTGSWQDLKDHMREAGDVCYADVFR--DGTGVVEFLNYEDMKYAVKQLDDSKFRSHE 166
Query: 180 I 180
+
Sbjct: 167 V 167
>gi|119579662|gb|EAW59258.1| hCG1642151, isoform CRA_a [Homo sapiens]
Length = 418
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
D+YGPP +++ LI+E+LSS SWQDLKDFM+Q EV Y DAHK +EG VEF S DM
Sbjct: 223 DKYGPPVHTEYELIIESLSSCYSWQDLKDFMQQADEVTYVDAHKECTSEG-VEFHSYFDM 281
Query: 164 KKALDKLDNAELNG 177
K ALDKLD AE+ G
Sbjct: 282 KLALDKLDGAEILG 295
>gi|440471047|gb|ELQ40084.1| hypothetical protein OOU_Y34scaffold00462g38 [Magnaporthe oryzae
Y34]
Length = 905
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 21/201 (10%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+ G G+I ++ L NGFGF+E++D DA D V +G +
Sbjct: 590 TRLYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMNGFGFIEYDDPLDARDVVPAFHGST 649
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRSDHRLIVEN 120
+GER+TV+ A+G R R G G G +R GP P R+ R+ +
Sbjct: 650 FMGERLTVQFARGT-----RNREGGSGGGGGGGGGGGGGYGGERSGPRPRRTAFRMQISG 704
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
L SWQ +V Y++ + + EG VEFE+++D+ A++ LD E + +
Sbjct: 705 LPVDTSWQ---------LDVVYSETGRNNNGEGFVEFETAADLASAVEALDGKEFKDKIV 755
Query: 181 RLIE----DKPRGGGRGRSRS 197
R + D P GRGRSRS
Sbjct: 756 RCVANTQPDPPPRDGRGRSRS 776
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 79/144 (54%), Gaps = 19/144 (13%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDA DA+Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G R P R + R G R+D+R++V
Sbjct: 69 DFDGHRLRVELAHG--------------GRGPSFDRSSSYSSAGRRGAAKRTDYRVMVTG 114
Query: 121 LSSRVSWQDLKDFMRQVGEVCYAD 144
L S SWQDLKD MR+ G+VC++D
Sbjct: 115 LPSSASWQDLKDHMRRAGDVCFSD 138
>gi|451996756|gb|EMD89222.1| hypothetical protein COCHEDRAFT_1158038 [Cochliobolus
heterostrophus C5]
Length = 338
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 22/185 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E + G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMNGFGFIEYKDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+ V+ A+G E P R+ +R+ + NL
Sbjct: 65 FMGERLIVQFARGSRARNENFTPHERVPPRP-----------------RRTPYRMRIANL 107
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ + G VE+E+++D+K A++KLD E G+ +
Sbjct: 108 PVETSWQDLKDFARQSGLDVVYSEVGRERDGTGFVEYETAADLKTAVEKLDRREFKGQEV 167
Query: 181 RLIED 185
I+D
Sbjct: 168 TCIQD 172
>gi|325087601|gb|EGC40911.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 316
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 86/161 (53%), Gaps = 20/161 (12%)
Query: 26 GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRG 85
G G+I ++ L +GFGF+E+ED DA D V +G GER+TV+ A+G R +E
Sbjct: 46 GSGKITEIKLMSGFGFIEYEDAMDAKDVVPAFHGTDFKGERLTVQFARG-PRHKETFSGP 104
Query: 86 YGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYAD 144
AP PR R+ +R+ + L SWQDLKDF RQ G +V Y++
Sbjct: 105 SDRSSAPRPR---------------RTIYRMQISGLPE-TSWQDLKDFARQSGLDVVYSE 148
Query: 145 AHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
H G VEFE+ SD+K A++KLD E G R+ +D
Sbjct: 149 TG--HDGRGFVEFETGSDLKTAVEKLDGREFKGSRVLCTQD 187
>gi|358331940|dbj|GAA50688.1| serine/arginine-rich splicing factor 4 [Clonorchis sinensis]
Length = 207
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 59/70 (84%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VYIG LP ERD+E+F KGYGR+RDV+LKNG+GFVEF++ +DADDAVY+L+G+ L
Sbjct: 2 SRVYIGHLPARCSERDIERFFKGYGRLRDVVLKNGYGFVEFDNEKDADDAVYDLHGRELR 61
Query: 64 GERVTVEIAK 73
GER+ VE A+
Sbjct: 62 GERIIVEHAR 71
>gi|324507194|gb|ADY43052.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 360
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+ +VY+G L + +ERD+E+F +GYG I +V++KNG+ FVEF DYRDADDAV +LNG+S
Sbjct: 1 MSARVYVGRLSFRAQERDVERFFRGYGHISEVLMKNGYAFVEFTDYRDADDAVRDLNGRS 60
Query: 62 LLGERVTVEIAKGIDRSQERGR 83
L G+RV VE+AK S+ RGR
Sbjct: 61 LFGDRVIVELAK----SRPRGR 78
>gi|170596998|ref|XP_001902973.1| Hypothetical RNA-binding protein T28D9.2 in chromosome II,
putative [Brugia malayi]
gi|158589007|gb|EDP28178.1| Hypothetical RNA-binding protein T28D9.2 in chromosome II,
putative [Brugia malayi]
Length = 128
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
+G++VY+G L Y ERD+E+F +GYGRI +++LKNG+ FVEF D RDA+DAV++LNG+S
Sbjct: 1 MGSRVYVGRLSYRAHERDIERFFRGYGRITEILLKNGYAFVEFSDRRDAEDAVHDLNGRS 60
Query: 62 LLGERVTVEIAKGIDRSQERGRRGY 86
LLG+RV V+ AK S+ RGR Y
Sbjct: 61 LLGDRVIVQNAK----SRPRGRDMY 81
>gi|357511859|ref|XP_003626218.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501233|gb|AES82436.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 296
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 94/176 (53%), Gaps = 19/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E +G I D+ LK G+ FVEFED RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIRLREVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAEDAIRYRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G RGY S G ++ S++R++V
Sbjct: 69 KFDGFRLRVELAHG--------GRGYSSSVDRYSSYSSGSRGVSKH-----SEYRVLVTG 115
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VC++ + R G+VE+ + DMK A+ KLD++E
Sbjct: 116 LPPSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIRKLDDSEF 171
>gi|324512727|gb|ADY45260.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 242
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNG 59
+VY+G LP V++RDLE YGRI + +K F F+EFED RDA+DA+ +G
Sbjct: 7 CRVYVGNLPSNVKQRDLEDLFDKYGRICFIDVKYSRGAPFAFLEFEDSRDAEDAIRGRDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
L G R+ VE+ +G+ GR YG P RS +R+I+
Sbjct: 67 YDLDGCRIRVEMTRGVGPRGPGGRPIYGGGGYDRRPPAPRG------PPVRRSGYRVIIS 120
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L + SWQDLKD MR G++CYAD +K GVVE+ DMK A+ KLD+ +
Sbjct: 121 GLPASGSWQDLKDHMRDAGDICYADVYK--DGTGVVEYTKYDDMKYAVRKLDDTKF 174
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALD 168
+R D R+ V NL S V +DL+D + G +C+ D + R +EFE S D + A+
Sbjct: 3 SRRDCRVYVGNLPSNVKQRDLEDLFDKYGRICFIDVKYSRGAPFAFLEFEDSRDAEDAIR 62
Query: 169 KLDNAELNGRRIRL 182
D +L+G RIR+
Sbjct: 63 GRDGYDLDGCRIRV 76
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 27/194 (13%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYEL 57
G VY+G LP +RER++E YG++ + +K F FVEF D RDA+DAV
Sbjct: 9 GCLVYVGNLPDDIREREVEDLFSKYGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGR 68
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
+G G R+ VE+AKG G P ++ R++
Sbjct: 69 DGYDFYGNRLRVELAKGAGGRGRGFGGGPPPGFR-----------------PRQTGFRVL 111
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAELN 176
V+ L SWQDLKD +RQV + Y + + R GVVEFE++ DM++ + KLD+ E
Sbjct: 112 VKGLPMSASWQDLKDHVRQVCKPAYTNVFRDRDGVTGVVEFETADDMERTIRKLDDTEFR 171
Query: 177 G----RRIRLIEDK 186
+R++ED+
Sbjct: 172 NPFDRAYVRVVEDR 185
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 11/176 (6%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI D+ LK + FVEFE+ RDA+DA+ +G
Sbjct: 9 IYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RG+ G G RY S+ R+IV
Sbjct: 69 NFDGCRLRVELAHG-----GRGQSSSDRRGGYGGSGGGGSGSGGRYCISRHSEFRVIVRG 123
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + G+V++ + DMK A+ KLD+ E
Sbjct: 124 LPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRKLDDTEF 179
>gi|427793957|gb|JAA62430.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 390
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 54/63 (85%)
Query: 125 VSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
+ QDLKD MRQVG+V YADAH+ RNEGVVEF S SDMK+A++KLDN E+NGRRIR++E
Sbjct: 17 LPHQDLKDRMRQVGDVTYADAHRHRRNEGVVEFASYSDMKRAIEKLDNTEINGRRIRVVE 76
Query: 185 DKP 187
+KP
Sbjct: 77 EKP 79
>gi|189211717|ref|XP_001942187.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979386|gb|EDU46012.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 340
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 22/185 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E + G G I ++ L NGFGF+E++D DA D V +G
Sbjct: 7 TRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMNGFGFIEYKDAMDARDVV--PDGSD 64
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+ V+ A+G E P R+ +R+ + NL
Sbjct: 65 FMGERLIVQFARGSRARNENFTPHERVPPRP-----------------RRTPYRMRIANL 107
Query: 122 SSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQDLKDF RQ G +V Y++ + G VE+E+++D+K A++KLD E G+ +
Sbjct: 108 PVETSWQDLKDFARQSGLDVVYSEVGRERDGTGFVEYETAADLKAAVEKLDRREFKGQEV 167
Query: 181 RLIED 185
++D
Sbjct: 168 TCVQD 172
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D+E +G++ V LKN F FVEFED+RDA DAV +
Sbjct: 9 NRIYVGNLPPDIRTKDVEDLFFRFGKVSFVDLKNRRGPPFVFVEFEDHRDASDAVKARSN 68
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT--RSDHRLI 117
G ++ VE +G G G SYR G R P RS +R++
Sbjct: 69 YDYDGYKLRVEFPRG-------GGPG-SSYRGRSNNDRGGSGRGGGNNRPAARRSQYRVL 120
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V L S SWQDLKD MR+ G+VC+AD +K GVVEF DMK A+ KLD++
Sbjct: 121 VSGLPSSGSWQDLKDHMREAGDVCFADVYK--DGTGVVEFLRYEDMKYAIKKLDDSRF 176
>gi|167515992|ref|XP_001742337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778961|gb|EDQ92575.1| predicted protein [Monosiga brevicollis MX1]
Length = 164
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 100/180 (55%), Gaps = 25/180 (13%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VY+G LP +RER+L++ YGRI D+ +K + FV FED RDA+DAV+ +G + G
Sbjct: 7 RVYVGNLPRDIRERELDELFYKYGRILDIHIKGPYAFVTFEDERDAEDAVHGRDGINFAG 66
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSR 124
R+ VE++ P RRG + RD+ G S+ R++++ L
Sbjct: 67 GRLRVELSN-------------------PGRRG-ANPRDNFSG--KHSEFRVLIKGLPRT 104
Query: 125 VSWQDLKDFMR-QVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
SWQD+KDF + + +V + D ++ G+ EF + DM ALDK++ +LN +R++
Sbjct: 105 ASWQDVKDFFKDERLDVVFTDVNR--DGVGMAEFGNQEDMNFALDKMNGRKLNSHLVRIM 162
>gi|326471023|gb|EGD95032.1| pre-RNA splicing factor Srp2 [Trichophyton tonsurans CBS 112818]
Length = 317
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 38/200 (19%)
Query: 4 TKVYIGGLPYG---------------VRERDLEKFV--KGYGRIRDVILKNGFGFVEFED 46
T++Y+G LP V ++D+E+ G G+I ++ L GFGF+E+ED
Sbjct: 7 TRLYLGNLPRNADSKGHLFCLDSLPPVNKQDIEEHFGSHGTGKITEIKLMQGFGFIEYED 66
Query: 47 YRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRY 106
DA D V +G GER+TV+ A+G R + + PP R
Sbjct: 67 AMDAKDVV--PDGTDFKGERLTVQFARGPRRRE--------PFPGPPERSAAPR------ 110
Query: 107 GPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKK 165
P R+ +R+ + L SWQDLKDF RQ G +V Y++ R +G VEFE+ +D++
Sbjct: 111 --PRRTIYRMQITGLPE-TSWQDLKDFARQSGLDVVYSETRDRD-GKGFVEFENGNDLRT 166
Query: 166 ALDKLDNAELNGRRIRLIED 185
A++KLD + G R+ D
Sbjct: 167 AVEKLDGTDFKGSRVTCTAD 186
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 91/171 (53%), Gaps = 6/171 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI D+ LK + FVEFE RDA+DA+ +G
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+L G R+ VE+A G RRG G G R+G S+ R+IV
Sbjct: 69 NLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRG 128
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKL 170
L S SWQDLKD MR+ G+VC+A+ + GVV++ + DMK A+ L
Sbjct: 129 LPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAVRNL 179
>gi|224285040|gb|ACN40249.1| unknown [Picea sitchensis]
Length = 398
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 103/196 (52%), Gaps = 26/196 (13%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYEL 57
+ +Y+G LP +RE ++E YGRI D+ LK G+ F+EF++ RDA+DA+
Sbjct: 5 NSTIYVGNLPGDIRESEIEDLFYKYGRIIDIDLKLPPRPPGYCFIEFDNARDAEDAIRGR 64
Query: 58 NGKSLLGERVTVEIAKGIDRSQE--RGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
+G G R+ VE A G S + G GS + RR G +R
Sbjct: 65 DGYKFDGHRLRVERAHGRASSVDVYYGSHSSGSRSSGLYRRSTG--------------YR 110
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAE 174
+IV L + SWQDLKD MR+ G+VC++ +++ GVV++ S DMK A+ KLD++E
Sbjct: 111 VIVHGLPTSASWQDLKDHMRRAGDVCFSQVYRKGSGTVGVVDYTSYEDMKYAIRKLDDSE 170
Query: 175 LNG----RRIRLIEDK 186
IR+ EDK
Sbjct: 171 FRNPFSRSYIRVREDK 186
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE +E YGRI DV LK + FVEFE+ RDA+DA+ +G
Sbjct: 9 IYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGI--DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
+ G R+ VE+A G S +R G G G R G S+ R+IV
Sbjct: 69 NFDGSRLRVELAHGGRGPSSNDRRGGYGGGGGGGGGGGGGGGGGGGRLGISRHSEFRVIV 128
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + G+V++ + DMK A+ KLD+ E
Sbjct: 129 RGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKYAIRKLDDTEF 186
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 99/180 (55%), Gaps = 12/180 (6%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNGK 60
KVY+G LP VR++++E YGRI+ + +K+G F FVEFED+RDA+DAV +G
Sbjct: 11 KVYVGNLPGDVRDKEVEDIFHKYGRIKYIDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 70
Query: 61 SLLGERVTVEIAKGIDRSQERGRR-----GYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
G R+ VE +G+ GR GY S G GP R+ +R
Sbjct: 71 EFDGRRIRVEFTRGVGPRGPGGRPLNDDGGY-SGGRDRGDYRGGRGGGRGGGPQRRTGYR 129
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
+IVE L SWQDLKD MR+ G+VCYAD + GVVEF D+K A+ KLD+ +
Sbjct: 130 VIVEGLPPTGSWQDLKDHMREAGDVCYADVAR--DGTGVVEFTRYDDVKYAVRKLDDTKF 187
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 100/191 (52%), Gaps = 11/191 (5%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNGK 60
KVY+G LP VRE+++E YGRI+ V +K+G F FVEFED+RDA+DAV +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE +G+ GR G GP R+ +R+IVE
Sbjct: 70 EFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEG 129
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR- 179
L SWQDLKD MR G+VCYAD + GVVEF D+K A+ KLD+ +
Sbjct: 130 LPPTGSWQDLKDHMRDAGDVCYADVARD--GTGVVEFTRYEDVKYAVRKLDDTKFRSHEG 187
Query: 180 ----IRLIEDK 186
IR+ ED
Sbjct: 188 ETAYIRVREDN 198
>gi|197692449|dbj|BAG70188.1| splicing factor arginine/serine-rich 5 [Homo sapiens]
Length = 107
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 55/70 (78%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK G GFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGIGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVE 70
L ERVT+E
Sbjct: 61 ELCSERVTIE 70
>gi|395328918|gb|EJF61308.1| hypothetical protein DICSQDRAFT_170461 [Dichomitus squalens
LYAD-421 SS1]
Length = 224
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 13/183 (7%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M +VY+GG+P + ++ K + YGRI ++ L+ GFGFV+FE R + V + +
Sbjct: 1 MDSARVYLGGVPDSLSGEEIYKHLSVYGRITEIKLRPGFGFVQFEHRR---EVVRAFSNQ 57
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
LG + V++A+ +R Y APP + + DR P + + ++V
Sbjct: 58 PFLGFAINVQLARP-ERYARSPELEYEPPSAPP-----AYHQQDR---PKKMRYAVVVNG 108
Query: 121 LSSRVSWQDLKDFMRQV-GEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L R WQ+LKDF R V GEV + D K HR G + + D +A+ +LD L G
Sbjct: 109 LDPRTCWQELKDFGRSVGGEVAFCDVDKDHRTRGWLNYTQEEDANRAVRELDGTRLLGNV 168
Query: 180 IRL 182
+RL
Sbjct: 169 VRL 171
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 6/176 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI D+ LK + FVEF++ RDA+DA+ +G
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RRGYG G R+G S+ R+IV
Sbjct: 69 NFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGGGGGSGAGGGRFGISRHSEFRVIVRG 128
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + G+V++ + DMK A+ KLD+ E
Sbjct: 129 LPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEF 184
>gi|222618302|gb|EEE54434.1| hypothetical protein OsJ_01505 [Oryza sativa Japonica Group]
Length = 270
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 30/171 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
+Y+G LP +RER++E F +FED RDADDA+ +G + G
Sbjct: 80 IYVGNLPGDIREREVEDL-----------------FYKFEDPRDADDAICGRDGYNFDGY 122
Query: 66 RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRV 125
R+ VE+A G GR SY P R + R R G RS++R++V L S
Sbjct: 123 RLRVELAHG-------GRGQSYSYDRP---RSYSSGR--RGGVSRRSEYRVMVTGLPSSA 170
Query: 126 SWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSDMKKALDKLDNAEL 175
SWQDLKD MR+ G+VC++D ++ G+V++ + DMK A+ KLD++E
Sbjct: 171 SWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIRKLDDSEF 221
>gi|356574963|ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 264
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 95/176 (53%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP VR R++E YG I D+ LK G+ FVEFED RDA+DA+ +G
Sbjct: 9 IYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIQYRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G RGY S R G RSD+R++V
Sbjct: 69 NFDGFRLRVELA--------HGGRGYSS---SVDRYSSYSGGSGSRGVSRRSDYRVLVTG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VC++ + R G+V++ + DMK A+ KLD++E
Sbjct: 118 LPPSASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYAIRKLDDSEF 173
>gi|268531628|ref|XP_002630941.1| C. briggsae CBR-RSP-5 protein [Caenorhabditis briggsae]
Length = 213
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G +PY RERD+E+F+KGYGRI ++ +K GF FV+FEDYRDA+DA ++L+GK++ G
Sbjct: 3 RIYLGKIPYHARERDIERFLKGYGRITNISMKYGFAFVDFEDYRDAEDACHDLDGKTMDG 62
Query: 65 E--RVTVEIAKG 74
RV VE+AKG
Sbjct: 63 SSMRVVVEMAKG 74
>gi|350646485|emb|CCD58884.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 207
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 86/177 (48%), Gaps = 29/177 (16%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG------FGFVEFEDYRDADDAVYELN 58
K+Y+G LP + RD+E YG I + LK G F FVEFED DA DAV +
Sbjct: 7 KIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRD 66
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G + G + VE+ + ++ G GP RSD R+IV
Sbjct: 67 GYNFDGYALRVELPRTGGFNRGGGGAS---------------------GPSRRSDFRVIV 105
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+V YAD + GVVEF DMK A+ +LD+++
Sbjct: 106 TGLPPTGSWQDLKDHMREAGDVGYADVFR--DGTGVVEFLRYEDMKYAIRRLDDSKF 160
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 37/258 (14%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG I + LK G+ FVEFED +DA+DA+ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE A G RG+ S + R + G RS++R++V
Sbjct: 69 DFDGHRLRVEPA--------HGGRGHSSSKD---RHNSHSNGRGGRGVSRRSEYRVLVTG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALDKLDNAELNGR- 178
L S SWQDLKD MR+ G+VC++ H G+V++ + DMK A+ KLD++E
Sbjct: 118 LPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 177
Query: 179 ---RIRLIE---------DKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGS 226
+R+ E G R RS S S+S+SP+ +S S
Sbjct: 178 SKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQRS 237
Query: 227 PRKS-------KSKAKSV 237
P KS +S AKS
Sbjct: 238 PAKSPKGKSSQRSPAKSP 255
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNG 59
+++Y+G LP VR +D+E +G++ V LK+ F FVEFED RDA+DAV +G
Sbjct: 5 SRIYVGNLPTSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRDG 64
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGS---YRAPPPRRGWGHDRDDRYGPPTRSDHRL 116
G R+ VE +G+ GR +G+ Y G+G R+++R+
Sbjct: 65 YDFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRV 124
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
IV L + SWQDLKD MR+ G+VCYAD + GVVE+ DMK A+ KLD+ +
Sbjct: 125 IVTGLPTSGSWQDLKDHMREAGDVCYADITR--DGTGVVEYARLDDMKYAIRKLDDTKF 181
>gi|148669918|gb|EDL01865.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_c
[Mus musculus]
Length = 212
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 81/177 (45%), Gaps = 53/177 (29%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G R+ VE PRR
Sbjct: 76 GYDYDGYRLRVEF----------------------PRR---------------------- 91
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 92 --LPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTKF 144
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 95/177 (53%), Gaps = 14/177 (7%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI D+ LK + FVEF++ RDA+DA+ +G
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
+ G R+ VE+A G GR S R G +R S+ R+IV
Sbjct: 69 NFDGCRLRVELAHG-------GRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIVR 121
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + G+V++ + DMK A+ KLD+AE
Sbjct: 122 GLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDAEF 178
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 37/258 (14%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER++E YG I + LK G+ FVEFED +DA+DA+ +G
Sbjct: 9 VYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE A G RG+ S + R + G RS++R++V
Sbjct: 69 DFDGHRLRVEPA--------HGGRGHSSSKD---RHNSHSNGRGGRGVSRRSEYRVLVTG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALDKLDNAELNGR- 178
L S SWQDLKD MR+ G+VC++ H G+V++ + DMK A+ KLD++E
Sbjct: 118 LPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 177
Query: 179 ---RIRLIE---------DKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGS 226
+R+ E G R RS S S+S+SP+ +S S
Sbjct: 178 SKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQRS 237
Query: 227 PRKS-------KSKAKSV 237
P KS +S AKS
Sbjct: 238 PAKSPKGKSSQRSPAKSP 255
>gi|149053805|gb|EDM05622.1| rCG34610, isoform CRA_a [Rattus norvegicus]
Length = 214
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 81/177 (45%), Gaps = 51/177 (28%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G R+ VE PR G
Sbjct: 76 GYDYDGYRLRVEF----------------------PRSG--------------------- 92
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 93 -RLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTKF 146
>gi|212526968|ref|XP_002143641.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
gi|210073039|gb|EEA27126.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 19/150 (12%)
Query: 37 NGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRR 96
NGFGF+E+ED DA D V +G GER+TV+ A+G R +E AP PRR
Sbjct: 2 NGFGFIEYEDAMDARDVV--PDGSDFKGERLTVQFARGP-RHKETFNGPSDRPSAPRPRR 58
Query: 97 GWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVV 155
+ R+ V L + SWQDLKDF RQ G +V Y++ + G V
Sbjct: 59 ---------------TVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDGRGFV 103
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIED 185
EFES +D+K A++KLD EL G ++ + D
Sbjct: 104 EFESHADLKTAVEKLDGRELKGSQVTCVAD 133
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 21/117 (17%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVIL------KNGFGFVEFEDYRDADDAVYELN 58
++ + GLP +DL+ F + G DV+ ++G GFVEFE + D AV +L+
Sbjct: 62 RMQVSGLPTETSWQDLKDFARQSGL--DVVYSETTRERDGRGFVEFESHADLKTAVEKLD 119
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP-----PPRRGWGH-DRDDRYGPP 109
G+ L G +VT + ++ER YR P PPRRG+ D DR GPP
Sbjct: 120 GRELKGSQVTC--VADVQPAEER-----PPYRDPYRSRSPPRRGYPPTDEYDRRGPP 169
>gi|348683415|gb|EGZ23230.1| hypothetical protein PHYSODRAFT_556082 [Phytophthora sojae]
Length = 222
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 101/188 (53%), Gaps = 37/188 (19%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVYELN 58
+V++G LP VRERDL + +GRI V +K F F+ +++ DA DAV ++
Sbjct: 2 ARVFVGNLPEDVRERDLSDKFERFGRISSVRIKFPTRPPPFAFIAYDNEEDASDAVRSMH 61
Query: 59 GKSLLGERVTVEIAKG-IDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
G L G R+ VE+++G +D ++ RG + +R+
Sbjct: 62 GAMLSGCRLRVEMSRGLVDDARPRG-----------------------------TQYRVK 92
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
+ L + +SWQDLKDF+R+ G+V ++D + R G F +S +M++A+ +LD +L+G
Sbjct: 93 ISGLPATMSWQDLKDFLRKGGDVVHSDVDR--RGNGTASFATSDEMRRAIRQLDGTDLDG 150
Query: 178 RRIRLIED 185
R+R+ E+
Sbjct: 151 ERVRVREE 158
>gi|428162693|gb|EKX31812.1| hypothetical protein GUITHDRAFT_82780, partial [Guillardia theta
CCMP2712]
Length = 208
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 93/183 (50%), Gaps = 30/183 (16%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVY-ELNGKSL 62
T+ +G LP +R RD+E YGR+ + F FV FE DA+DAV +G
Sbjct: 1 TRFAVGNLPLDIRTRDVEDLFYKYGRLPTI--PPAFAFVSFEYPEDAEDAVRGRADGVMF 58
Query: 63 LGERVTVEIAKG------------IDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT 110
G+R+ VE+++ + + ++ GR RAPP RD R
Sbjct: 59 EGQRLRVEMSRSSQDGYVEWGGSWVGKEEDGGRASQAGNRAPP--------RDLR----- 105
Query: 111 RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKL 170
RSDHR+I+ L SWQDLKDF R GEV ++D + + G+VEF + SD + A+ K+
Sbjct: 106 RSDHRIIISGLPPSASWQDLKDFFRSAGEVIFSDVDR--QGGGIVEFANKSDQEYAISKV 163
Query: 171 DNA 173
+A
Sbjct: 164 KHA 166
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI DV LK + FVEFE+ RDA+DA+ +G
Sbjct: 9 IYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
+ G R+ VE+A G G G G +R S+ R+IV
Sbjct: 69 NFDGCRLRVELAHG----------GRGPSSNDRRGGYGGGGGSGGRFGISRHSEFRVIVR 118
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + GVV++ + DMK A+ KLD+ E
Sbjct: 119 GLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIRKLDDTEF 175
>gi|170284968|gb|AAI61144.1| Unknown (protein for MGC:185314) [Xenopus (Silurana) tropicalis]
Length = 91
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 57/70 (81%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
+VYIG L + RERD+E+F KG+G+I +V LKNG+GFVEFED RDA+DAVYE+NG+ L G
Sbjct: 3 RVYIGRLSHRARERDVERFFKGFGKIVEVDLKNGYGFVEFEDSRDAEDAVYEMNGRELCG 62
Query: 65 ERVTVEIAKG 74
ERV VE A+
Sbjct: 63 ERVIVEHARA 72
>gi|149025039|gb|EDL81406.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Rattus
norvegicus]
Length = 108
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 54/72 (75%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M G +V+IG L RE+D+E+F KGYGRIRD+ LK GFGFVEFED RDADDAVYEL+GK
Sbjct: 1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK 60
Query: 61 SLLGERVTVEIA 72
L E V + +
Sbjct: 61 ELCSESVLMHFS 72
>gi|291407986|ref|XP_002720309.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
Length = 343
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 23/177 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP + R+++ YG +RDV LKN F FVEF RDA +AV+ +
Sbjct: 15 CRIYVGNLPPDIGTREVKDMFYKYGTVRDVDLKNRRWGRPFAFVEFNSPRDAHNAVHGRD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G R+ VE + R+ G RG R R RSD+R++V
Sbjct: 75 GYDYEGYRLRVEFPRNY-RAIYGGGRGLLETRGTSSR---------------RSDNRVLV 118
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G VCYA R GVVEF DM A+ KL+N +
Sbjct: 119 SGLPPSGSWQDLKDHMREAGYVCYAAV--RRDGSGVVEFVWKEDMSYAVRKLNNTKF 173
>gi|225556594|gb|EEH04882.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 86/161 (53%), Gaps = 22/161 (13%)
Query: 26 GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRG 85
G G+I ++ L +GFGF+E+ED DA D V +G GER+TV+ A+G R +E
Sbjct: 46 GSGKITEIKLMSGFGFIEYEDAMDAKDVV--PDGTDFKGERLTVQFARG-PRHKETFSGP 102
Query: 86 YGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYAD 144
AP PRR + +R+ + L SWQDLKDF RQ G +V Y++
Sbjct: 103 SDRSSAPRPRR---------------TIYRMQISGLPE-TSWQDLKDFARQSGLDVVYSE 146
Query: 145 AHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
H G VEFE+ SD+K A++KLD E G R+ +D
Sbjct: 147 TG--HDGRGFVEFETGSDLKTAVEKLDGREFKGSRVLCTQD 185
>gi|308502850|ref|XP_003113609.1| CRE-RSP-5 protein [Caenorhabditis remanei]
gi|308263568|gb|EFP07521.1| CRE-RSP-5 protein [Caenorhabditis remanei]
Length = 215
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G +PY RERD+E+F+KGYGRI ++ +K GF FV+FED+RDA+DA ++L+GK++ G
Sbjct: 3 RIYLGKIPYNARERDIERFLKGYGRITNISMKYGFAFVDFEDHRDAEDACHDLDGKTMDG 62
Query: 65 --ERVTVEIAKG 74
RV VE+A+G
Sbjct: 63 GSMRVVVEMARG 74
>gi|291228498|ref|XP_002734207.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 230
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 92/193 (47%), Gaps = 22/193 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R +D+E YG I D+ LKN F FVEFED RDA+DAV +G
Sbjct: 14 CRIYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPPFSFVEFEDKRDAEDAVRGRDG 73
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE +G G G RS++R +V
Sbjct: 74 YDYDGYRLRVEFPRGGGGGGGGGGGLGGGPGRGRGGPP-----------ARRSEYRCLVS 122
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
L SWQDLKD MR+ G+VC+AD ++ GVVEF DMK A LD+ +
Sbjct: 123 GLPPTGSWQDLKDHMREAGDVCFADVYR--DGTGVVEFLRYEDMKYAAKHLDDTKFRSHE 180
Query: 180 -----IRLIEDKP 187
IR+ ED P
Sbjct: 181 GETSYIRVKEDYP 193
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI D+ LK + FVEF++ RDA+DA+ +G
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR-SDHRLIVE 119
+ G R+ VE+A G GR S R G +R S+ R+IV
Sbjct: 69 NFDGCRLRVELAHG-------GRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIVR 121
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + G+V++ + DMK A+ KLD+ E
Sbjct: 122 GLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTLGIVDYTNYDDMKYAIRKLDDTEF 178
>gi|357464169|ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula]
Length = 273
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 9 IYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGI-DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
+ G R+ VE+A G S R G G R+G S+ R+IV
Sbjct: 69 NFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRHSEFRVIVR 128
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + G+V++ + DMK A+ KLD+ E
Sbjct: 129 GLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEF 185
>gi|357464167|ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 9 IYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGI-DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
+ G R+ VE+A G S R G G R+G S+ R+IV
Sbjct: 69 NFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRHSEFRVIVR 128
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + G+V++ + DMK A+ KLD+ E
Sbjct: 129 GLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEF 185
>gi|399216785|emb|CCF73472.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 99/216 (45%), Gaps = 42/216 (19%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-------FGFVEFEDYRDADDAVYELN 58
+Y+ LP + E +L+ +GRIR + +K + ++EF+ DDA+ +
Sbjct: 8 IYVANLPPDITEHELDDKFYKFGRIRQITIKQSRRRDDECYAYIEFDSSSSVDDAIKYRD 67
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G R+ V+I + +G S R GPP R+D+R+IV
Sbjct: 68 GYKFGRYRIFVDILR---------EKGGKSSR----------------GPPMRTDYRVIV 102
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG- 177
+NL S SWQDLKD MR+ G V Y+ +R +G VE+E+ DM+ AL+ LD +E
Sbjct: 103 DNLPSSASWQDLKDHMRKAGPVGYSSV---NRGKGYVEYETKKDMEWALENLDKSEFKNI 159
Query: 178 ------RRIRLIEDKPRGGGRGRSRSSSSRSRSKSR 207
R LI G GRS S S K R
Sbjct: 160 YSKSIIRVTHLIIKVHPGNNDGRSASESIYKDHKYR 195
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG I + LK G+ FVEFE+ RDA+DA+ +G
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G RG+ S R R R G RS++R++V
Sbjct: 69 DFDGHRLRVELA--------HGGRGHSS---SIDRHSHSSGRGGRGGASRRSEYRVLVTG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ H G+V++ + DMK A+ KLD++E
Sbjct: 118 LPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEF 173
>gi|116284263|gb|AAI24193.1| Zgc:55809 protein [Danio rerio]
Length = 284
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++VY+G L + RE+D+E+F KGYG+I +V LKNG+GFVEF+D RDADDAVY+LNGK L
Sbjct: 2 SRVYVGKLSHRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDLC 61
Query: 64 GERVT 68
G+RV
Sbjct: 62 GKRVI 66
>gi|427792589|gb|JAA61746.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 264
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 50/58 (86%)
Query: 128 QDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
+DLKD+MRQ GEV YADAH+ RNEGVVEF + SDMK ALDKLDN +L+GRRIRLIE+
Sbjct: 44 KDLKDYMRQAGEVTYADAHRLRRNEGVVEFATYSDMKNALDKLDNTDLSGRRIRLIEE 101
>gi|71996524|ref|NP_495307.3| Protein RSP-5, isoform a [Caenorhabditis elegans]
gi|50897847|sp|Q10021.3|RSP5_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 5;
AltName: Full=CeSC35-2; AltName: Full=RNA-binding
protein srp-3
gi|351064335|emb|CCD72697.1| Protein RSP-5, isoform a [Caenorhabditis elegans]
Length = 208
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G +PY RERD+E+F+KGYG+I ++ +K GF FV+FED RDA+DA ++L+GK++ G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 65 E--RVTVEIAKGIDRSQER 81
R+ VE+A+G R +R
Sbjct: 63 SSMRLVVEMARGKPRGNDR 81
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 16/172 (9%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP +R RD+E + +G++ V LKN F FVEFED RDA+DAV +G
Sbjct: 10 ARIYVGNLPPDIRSRDIESCFERFGKVVAVDLKNRKGPPFAFVEFEDARDAEDAVRYKDG 69
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
L G ++ VE +G +R R R G R + R +
Sbjct: 70 YELDGYKLRVEFPRGSGVHPGYNQRN----RMLAGRNGC------RTNASRHTGFRCYIS 119
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLD 171
L + SWQDLKD MR+ G+VC++D +K GVVE+ + D++ AL L+
Sbjct: 120 GLPASGSWQDLKDHMREAGDVCFSDVYK--NGNGVVEYMRAEDLEYALANLN 169
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 111 RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDK 169
RSD R+ V NL + +D++ + G+V D R VEFE + D + A+
Sbjct: 7 RSDARIYVGNLPPDIRSRDIESCFERFGKVVAVDLKNRKGPPFAFVEFEDARDAEDAVRY 66
Query: 170 LDNAELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSK-SGSP 227
D EL+G ++R+ + PRG G + +R + R+ R++ SR R SG P
Sbjct: 67 KDGYELDGYKLRV--EFPRGSGVHPGYNQRNRMLA-GRNGCRTNASRHTGFRCYISGLP 122
>gi|357442431|ref|XP_003591493.1| Serine/arginine-rich splicing factor [Medicago truncatula]
gi|355480541|gb|AES61744.1| Serine/arginine-rich splicing factor [Medicago truncatula]
Length = 390
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 90/184 (48%), Gaps = 19/184 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
VY+G LP +RER+++ YG I + LK + FV F+D +ADDA+ E +G
Sbjct: 62 VYVGNLPGDIREREVKHLFMKYGHITRIDLKVPPRPPCYAFVVFKDALNADDAICECDGY 121
Query: 61 SLLGERVTVEIAK-GIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE A G S R R S G G G + S++R++V
Sbjct: 122 DFDGCRLRVEAAHVGYCNSSSRDRYSIHS-------NGQGGR-----GVSSHSEYRVLVN 169
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYAD-AHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
L S S QDLKD MR+ G VC++ H G+V++ + DMK A+ LD +E
Sbjct: 170 RLPSSASCQDLKDHMRKAGAVCFSQVVHDGRVTTGIVDYTNCDDMKYAIKNLDGSEFQNA 229
Query: 179 RIRL 182
R+
Sbjct: 230 FSRM 233
>gi|119491909|ref|XP_001263449.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
gi|119411609|gb|EAW21552.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
Length = 258
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 81/150 (54%), Gaps = 21/150 (14%)
Query: 37 NGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRR 96
NGFGF+E+ED DA D V +G GER+TV+ A+G R + ++ P R
Sbjct: 2 NGFGFIEYEDAMDARDVV--PDGSDFKGERLTVQFARGPRRKE--------NFPGPTDRP 51
Query: 97 GWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVV 155
P R+ R++V L SWQDLKDF RQ G +V Y++ R + G V
Sbjct: 52 NMPR--------PRRTIFRMLVSGLPE-TSWQDLKDFARQSGLDVVYSET-GREQGRGFV 101
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIED 185
EFE+++D+K A+DKLD E G R+ + D
Sbjct: 102 EFETAADLKTAIDKLDGREFKGSRVSCVAD 131
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE ++E YGRI ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 116 IYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 175
Query: 61 SLLGERVTVEIAKGI-DRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
+ G R+ VE+A G S R G G R+G S+ R+IV
Sbjct: 176 NFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRHSEFRVIVR 235
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC+A+ + G+V++ + DMK A+ KLD+ E
Sbjct: 236 GLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEF 292
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG I + LK G+ FVEFE+ RDA+DA+ +G
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G RG+ S R R R G RS++R++V
Sbjct: 69 DFDGHRLRVELA--------HGGRGHSS---SIDRHSHSSGRGGRGGASRRSEYRVLVTG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ H G+V++ + DMK A+ KLD++E
Sbjct: 118 LPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEF 173
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
+VY+G LP +R RD+E +G+I V LK F FVEFED RDA DAV+E +G
Sbjct: 7 VRVYVGNLPPDIRARDIEDLFYKFGKIAFVDLKTRRGPPFCFVEFEDPRDASDAVHERDG 66
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
+ G + VE +G R R G G Y R G G P RS++R++V
Sbjct: 67 YNYDGYTLRVEFPRGGGPGGSRSRGGGGGYGF---RGGRGPPGGRGGPPSRRSEYRVLVS 123
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCY D +K GVVEF DMK A+ KLD+ +
Sbjct: 124 GLPPSGSWQDLKDHMREAGDVCYTDVYKD--GTGVVEFLRKEDMKHAVSKLDDTKF 177
>gi|401399758|ref|XP_003880627.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
gi|325115038|emb|CBZ50594.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
Length = 448
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK------NGFGFVEFEDYRDADDAVYE 56
G+++++ LP V E +LE +GRI D+ L+ + FV+F DY+ AD+A+
Sbjct: 20 GSRIFVANLPLDVTENELEDLFYKFGRIEDIELRRDRTNDSTIAFVQFADYKAADEAIEG 79
Query: 57 LNGKSLLGERVTVEIAKGIDRSQERGRR-GYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
+G L R+ +E RS++R RR G G YGPP RS+ R
Sbjct: 80 RDGTRLGFHRIRIE------RSRQRLRRPGEFGRSDRSGYGREGGGSGPAYGPPRRSEFR 133
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKL 170
+ V L SWQDLKD MR+ G+V YA+ GVVE+ + SDM AL KL
Sbjct: 134 VRVYGLPPTASWQDLKDHMRRAGDVGYANIDG---GVGVVEYSNGSDMDYALRKL 185
>gi|396459915|ref|XP_003834570.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
gi|312211119|emb|CBX91205.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
Length = 493
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 93/203 (45%), Gaps = 38/203 (18%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E + G G I +V L NGFGF+E++D DA D V +G
Sbjct: 137 TRLYLGNLPRSATKADVEAHFQTHGTGEITEVKLMNGFGFIEYKDPMDARDVVPAFHGSD 196
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+ V+ A+G E P R+ +R+ + +L
Sbjct: 197 FMGERLIVQFARGSRARNENFTPHERVPPR-----------------PRRTPYRMRITSL 239
Query: 122 SSRVSWQDLKDFMRQ----------------VGEVCYADAHKRHRNEG---VVEFESSSD 162
SWQDLKDF RQ G V Y A R R VE+E+++D
Sbjct: 240 PVETSWQDLKDFARQSGLDVVYSEVGRERDGTGSVLYMSALARPRLTCACRFVEYETAAD 299
Query: 163 MKKALDKLDNAELNGRRIRLIED 185
+K A++KLD E G+ + ED
Sbjct: 300 LKAAVEKLDRREFKGQEVGCTED 322
>gi|157930920|gb|ABW04629.1| splicing factor arginine/serine-rich 4 [Haliotis diversicolor
supertexta]
Length = 159
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 49/55 (89%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKPR 188
MRQ GEV +ADAHK+H+NEG+VEF + SDMK A++KLDN E++GR+IR++EDKP+
Sbjct: 1 MRQAGEVTFADAHKKHKNEGIVEFATYSDMKNAMEKLDNTEIDGRKIRVVEDKPK 55
>gi|26342054|dbj|BAC34689.1| unnamed protein product [Mus musculus]
gi|149043027|gb|EDL96601.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_b [Rattus norvegicus]
Length = 210
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKPR 188
MRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIEDKPR
Sbjct: 1 MRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPR 55
>gi|119596371|gb|EAW75965.1| splicing factor, arginine/serine-rich 6, isoform CRA_b [Homo
sapiens]
Length = 215
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKPR 188
MRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIEDKPR
Sbjct: 1 MRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPR 55
>gi|354479738|ref|XP_003502066.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Cricetulus
griseus]
gi|344251611|gb|EGW07715.1| Splicing factor, arginine/serine-rich 6 [Cricetulus griseus]
Length = 210
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKPR 188
MRQ GEV YADAHK NEGV+EF S SDMK+ALDKLD E+NGR IRLIEDKPR
Sbjct: 1 MRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPR 55
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 18/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RE+++E YG + + LK G+ FVEFE+ RDA+DA+ +G
Sbjct: 9 LYVGNLPGDIREKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G RG+ S G RS++R++V
Sbjct: 69 DFDGHRLRVELA--------HGGRGHSSSDRHSSYSGGRGRGGAS----RRSEYRVVVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ + G+V++ + DMK A+ K+D++E
Sbjct: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAIKKIDDSEF 172
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 95/176 (53%), Gaps = 17/176 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG I + LK G+ FVEFE+ RDA+DA+ +G
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G RG+ S R R G RS++R++V
Sbjct: 69 DFDGHRLRVELA--------HGGRGHSSSIDRHSHS---SGRGGRGGASRRSEYRVLVTG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADA-HKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ H G+V++ + DMK A+ KLD++E
Sbjct: 118 LPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEF 173
>gi|237841065|ref|XP_002369830.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211967494|gb|EEB02690.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 512
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 16/175 (9%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK------NGFGFVEFEDYRDADDAVYE 56
G+++++ LP V E +LE +GRI D+ ++ + FV+F +Y+ ADDA+
Sbjct: 19 GSRIFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEG 78
Query: 57 LNGKSLLGERVTVEIAKGIDRSQERGRR-GYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
+G L R+ +E RS++R RR G YGPP RS+ R
Sbjct: 79 RDGAHLGFHRIRIE------RSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFR 132
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKL 170
+ V L SWQDLKD MR+ G+V YA+ GVVE+ + DM AL KL
Sbjct: 133 VRVYGLPPTASWQDLKDHMRRAGDVGYANIEG---GVGVVEYSNGDDMDYALRKL 184
>gi|221483656|gb|EEE21968.1| hypothetical protein TGGT1_121760 [Toxoplasma gondii GT1]
Length = 513
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 16/175 (9%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK------NGFGFVEFEDYRDADDAVYE 56
G+++++ LP V E +LE +GRI D+ ++ + FV+F +Y+ ADDA+
Sbjct: 19 GSRIFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEG 78
Query: 57 LNGKSLLGERVTVEIAKGIDRSQERGRR-GYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
+G L R+ +E RS++R RR G YGPP RS+ R
Sbjct: 79 RDGAHLGFHRIRIE------RSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFR 132
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKL 170
+ V L SWQDLKD MR+ G+V YA+ GVVE+ + DM AL KL
Sbjct: 133 VRVYGLPPTASWQDLKDHMRRAGDVGYANIEG---GVGVVEYSNGDDMDYALRKL 184
>gi|340939264|gb|EGS19886.1| splicing factor srp2-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 307
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 27/201 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFV--KGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
T++Y+G LP + D+E G G I ++ + NGFGF+E++D DA D V +G
Sbjct: 8 TRLYLGNLPKHATKADVEAHFSKHGTGEITEIKIMNGFGFIEYKDPMDARDVVPAFHGSM 67
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
+GER+TV+ A+G +R ++ G+GH+R R+ HR+ + L
Sbjct: 68 FMGERLTVQFARG-NRHRDTA-------------NGYGHERAPPRP--RRTPHRMEITGL 111
Query: 122 SSRVSWQDLKDFMRQVGEVCYADAHKRHRN-EGVVEFESSSDMKKALDKLDNAELNGRRI 180
SWQ D V Y + +R + EG+VEFE+ +DM+ A++KLD E R
Sbjct: 112 PDGCSWQAGVD-------VVYTETSRRGNSWEGIVEFETPADMRTAIEKLDGREFKNSRT 164
Query: 181 RLIEDKPRGGGRGRSRSSSSR 201
+ PR RGRSRS R
Sbjct: 165 AQPSEPPR-YDRGRSRSPIRR 184
>gi|221504321|gb|EEE29996.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 513
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 16/175 (9%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK------NGFGFVEFEDYRDADDAVYE 56
G+++++ LP V E +LE +GRI D+ ++ + FV+F +Y+ ADDA+
Sbjct: 19 GSRIFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEG 78
Query: 57 LNGKSLLGERVTVEIAKGIDRSQERGRR-GYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
+G L R+ +E RS++R RR G YGPP RS+ R
Sbjct: 79 RDGAHLGFHRIRIE------RSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFR 132
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKL 170
+ V L SWQDLKD MR+ G+V YA+ GVVE+ + DM AL KL
Sbjct: 133 VRVYGLPPTASWQDLKDHMRRAGDVGYANIEG---GVGVVEYSNGDDMDYALRKL 184
>gi|300121283|emb|CBK21663.2| unnamed protein product [Blastocystis hominis]
Length = 381
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 92/181 (50%), Gaps = 28/181 (15%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK----NGFGFVEFEDYRDADDAVYEL 57
+ +KV++ LP VRE +L+ YG + DV LK +GFVEFE+ A++AV
Sbjct: 1 MPSKVFVANLPKDVRESELKDEFSRYGTVIDVTLKLTGHTPYGFVEFEEESAAEEAVKGK 60
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
NG L G + VE+A G RG DR +YGPP +++R+
Sbjct: 61 NGSVLGGLSLRVEVANG---------------------RGPKGDRGSKYGPPVHTNYRVE 99
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNG 177
V +L SWQDLKD MR+ G+V Y G+VE+ + DM +A+ LD+++
Sbjct: 100 VTHLPYHCSWQDLKDHMRKEGDVGYCSVDG---GVGIVEYTNYDDMMRAIKYLDDSKCLS 156
Query: 178 R 178
R
Sbjct: 157 R 157
>gi|388500622|gb|AFK38377.1| unknown [Lotus japonicus]
Length = 174
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +R R++E +G I D+ LK G+ FV+FED RDA+DA+Y +G
Sbjct: 9 IYVGNLPGDIRLREVEDIFYKFGPIVDIDLKIPPRPPGYAFVQFEDARDAEDAIYYRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G RG + RSD+R++V
Sbjct: 69 DFDGFRLRVELAHG-----GRGSSSSVDRYSSYSGGSSSRGAS------RRSDYRVLVTG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEFESSSDMKKALDKLDNA 173
L SWQDLKD MR+ G+VC++ + R G+V++ + DMK AL KLD
Sbjct: 118 LPPSASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYALRKLDGC 171
>gi|49037494|gb|AAT49042.1| splice factor [Toxoplasma gondii]
Length = 345
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK------NGFGFVEFEDYRDADDAVYE 56
G+++++ LP V E +LE +GRI D+ ++ + FV+F +Y+ ADDA+
Sbjct: 19 GSRIFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEG 78
Query: 57 LNGKSLLGERVTVEIAKGIDRSQERGRR-GYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
+G L R+ +E RS++R RR G YGPP RS+ R
Sbjct: 79 RDGAHLGFHRIRIE------RSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFR 132
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE- 174
+ V L SWQDLKD MR+ G+V YA+ GVVE+ + DM AL KL +
Sbjct: 133 VRVYGLPPTASWQDLKDHMRRAGDVGYANIEG---GVGVVEYSNGDDMDYALRKLHGSVF 189
Query: 175 ---LNGRRIRLIEDKPRG 189
+ +IR+ D RG
Sbjct: 190 RNIFHTAKIRVERDTERG 207
>gi|389583241|dbj|GAB65976.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 728
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 101/187 (54%), Gaps = 16/187 (8%)
Query: 4 TKVYIGGLPYGVRERDLE-KFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
K+++G + RE D+ KF+K YG I ++ K F F+E+E A+ A+ E NG+
Sbjct: 138 CKIFVGNISPDAREEDVRRKFLK-YGDIVNMQWKTRFAFIEYEKISHAEIAIKEENGQFF 196
Query: 63 LGERVTVEIAKG----IDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
GE + V+ +R+ RG + PP R + +R++ ++ R++V
Sbjct: 197 FGEELNVQPHHAGNYFHNRNDNRG------FYPPPYARNYSPNRNE--NREKKNALRIVV 248
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE--GVVEFESSSDMKKALDKLDNAELN 176
+N+ + SWQDLKDF R VG V YA+ + E G++E+ + ++KKA++ L+ + N
Sbjct: 249 KNVDEKASWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEYYNYENVKKAVEVLNGRKFN 308
Query: 177 GRRIRLI 183
G + ++
Sbjct: 309 GISVEVM 315
>gi|341892188|gb|EGT48123.1| CBN-RSP-5 protein [Caenorhabditis brenneri]
gi|341901487|gb|EGT57422.1| hypothetical protein CAEBREN_20510 [Caenorhabditis brenneri]
Length = 204
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G +PY RERD+E+F+KGYGRI ++ +K GF FV+FED RDA+DA ++L+G+++ G
Sbjct: 3 RLYLGKIPYNARERDIERFLKGYGRITNISMKYGFAFVDFEDSRDAEDACHDLDGRTMDG 62
Query: 65 E--RVTVEIAKG 74
RV V++A+G
Sbjct: 63 SSMRVVVQMARG 74
>gi|71996546|ref|NP_495308.3| Protein RSP-5, isoform d [Caenorhabditis elegans]
gi|351064338|emb|CCD72700.1| Protein RSP-5, isoform d [Caenorhabditis elegans]
Length = 208
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G +PY RERD+E+F+KGYG+I ++ +K GF FV+FED RDA+DA ++L+GK++ G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 65 E--RVTVEIAKGIDRSQER 81
R+ VE+A+G R +R
Sbjct: 63 SSMRLVVEMARGKPRGNDR 81
>gi|429859457|gb|ELA34237.1| pre-mRNA splicing factor [Colletotrichum gloeosporioides Nara gc5]
Length = 328
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 26 GYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRG 85
G G I ++ L NGFGF+E++D DA D V +G +GER+TV+ A+G R +E G G
Sbjct: 35 GTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQFARG-TRHREGGNGG 93
Query: 86 YGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYAD 144
+ PPR R G PT + SWQDLKDF RQ +V Y++
Sbjct: 94 GFNNERAPPRPRRTPHRMQITGLPTDT-------------SWQDLKDFARQSSLDVVYSE 140
Query: 145 AHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
+ G VEFE+++D++ A++KLD E G R+ + D
Sbjct: 141 TGRDGNGRGFVEFETAADLRTAVEKLDGREFKGNRVTCVADT 182
>gi|353241704|emb|CCA73501.1| related to pre-mrna splicing factor srp55 [Piriformospora indica
DSM 11827]
Length = 194
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 38/197 (19%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIR--DVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
++Y+G LP V D+ +F + R++ D + GFGF+EF+ D D A+ L+G
Sbjct: 4 RLYVGKLPPDVNSEDVRRFFEDEARVKVVDCRIMTGFGFIEFDSSEDMDTAL-RLDGHDF 62
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPP--TRSDHR----- 115
G+ + V++A R PPRR PP RS R
Sbjct: 63 QGQPILVQVA-----------------REKPPRRE----------PPREMRSSGRRQGVT 95
Query: 116 LIVENLSSRVSWQDLKDFMRQVGE-VCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
+IV N+S VSWQDLKDF R+ G V ++D + N+G++E+ ++ + ++A+ +LD E
Sbjct: 96 VIVSNVSRDVSWQDLKDFGREAGGGVIFSDIDRDVPNQGILEYYTAEEAERAVRELDGRE 155
Query: 175 LNGRRIRLIEDKPRGGG 191
L G + L RGGG
Sbjct: 156 LRGHTVTLRLQDSRGGG 172
>gi|68066368|ref|XP_675167.1| pre-mRNA splicing factor [Plasmodium berghei strain ANKA]
gi|56494193|emb|CAH97347.1| pre-mRNA splicing factor, putative [Plasmodium berghei]
Length = 457
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 28/156 (17%)
Query: 27 YGRIRDVILK-------NGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQ 79
+GRI+ + +K + FV + D +DA+ A+ +G GER+ VE + G ++S
Sbjct: 1 FGRIKYIDIKLTRGSTSTAYAFVHYYDIKDAEYAIERRDGYKFDGERLRVEFS-GENKS- 58
Query: 80 ERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGE 139
+G YR ++D GPP R++HR+IV NL WQ LKD MRQ G+
Sbjct: 59 ------FGKYRR----------KEDGIGPPLRTEHRIIVSNLPDNCKWQHLKDIMRQCGD 102
Query: 140 VCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
V YA+ +G+VEF M A++K D AE
Sbjct: 103 VGYANI---EHGKGIVEFVDRDGMLYAIEKFDRAEF 135
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 18/176 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG I + LK G+ FVEFE+ RDA+DA+ +G
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G ++ VE+A G RG + + G RS++R++V
Sbjct: 69 DFDGHQLRVELAHG-----GRGHSSSDRHSSHSGGG-------RGRGVSRRSEYRVLVTG 116
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKALDKLDNAEL 175
L S SWQDLKD MR+ G+VC++ + G+V++ + DMK A+ KLD++E
Sbjct: 117 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKHAIKKLDDSEF 172
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 136/266 (51%), Gaps = 26/266 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK G+ FVEFED RDA++A +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE A G RG G S+ P G G R+ S++R++V
Sbjct: 69 NFDGHRLRVEPAHG-----GRGNGG-SSFDRPSNFGGGGRRGVSRH-----SEYRVLVTG 117
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAELNGR- 178
L S SWQDLKD MR+ G+VC+++ ++ G+V++ + DMK A+ KLD++E
Sbjct: 118 LPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAF 177
Query: 179 ---RIRLIE-----DKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKS 230
IR+ E + R SRS S R+R S SRS S +S
Sbjct: 178 SKGHIRVKEYDGKRARSYSRSRSPSRSRSKSRSLSKSPRTRRSASRSRSRSRSVSSRSRS 237
Query: 231 KSKAKSVSRSPSPSKTRKRSRSRSDS 256
SK +S SRSP+ SK+ S + ++
Sbjct: 238 ASKGRSPSRSPARSKSPNASPANGEA 263
>gi|71996532|ref|NP_495309.3| Protein RSP-5, isoform b [Caenorhabditis elegans]
gi|351064336|emb|CCD72698.1| Protein RSP-5, isoform b [Caenorhabditis elegans]
Length = 166
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
++Y+G +PY RERD+E+F+KGYG+I ++ +K GF FV+FED RDA+DA ++L+GK++ G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 65 E--RVTVEIAKGIDRSQER 81
R+ VE+A+G R +R
Sbjct: 63 SSMRLVVEMARGKPRGNDR 81
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 89/180 (49%), Gaps = 39/180 (21%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNGK 60
KVY+G LP VR++++E YGRI+ + +K+G F F+EFED RDA+DAV +G
Sbjct: 9 KVYVGNLPADVRDKEVEDIFHKYGRIKYIDVKSGRGPAFAFIEFEDNRDAEDAVRARDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV-- 118
G R+ VE +G+ PR GP +S + +
Sbjct: 69 EFDGRRIRVEFTRGV-----------------GPR-----------GPVAQSTRKEVATV 100
Query: 119 ---ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
+ V +DLKD MR+ G+VCYAD + GVVEF D+K A+ KLD+ +
Sbjct: 101 EAVTIVEDVVVVKDLKDHMREAGDVCYADVAR--DGTGVVEFTRYDDVKYAIRKLDDTKF 158
>gi|344245044|gb|EGW01148.1| Splicing factor, arginine/serine-rich 4 [Cricetulus griseus]
Length = 368
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 46/54 (85%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
MRQ GEV YADAHK +NEGV+EF S SDMK+AL+KLD E+NGR+IRL+EDKP
Sbjct: 1 MRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKP 54
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
T++Y+G L R RDLE YGR+RDV +K + FVEF D RDADDA Y L+GK
Sbjct: 8 YANTRLYVGHLASRTRSRDLEYLFSKYGRVRDVDMKRDYAFVEFSDPRDADDARYHLDGK 67
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
L G R+ VE AKG+ RG R Y R PPP
Sbjct: 68 DLDGSRIIVEFAKGV----PRGSREYLG-RGPPP 96
>gi|357516359|ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522490|gb|AET02944.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 273
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 81/155 (52%), Gaps = 17/155 (10%)
Query: 27 YGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQER 81
YG I + LK G+ FVEFED +DA+DA+ +G G R+ VE A G R
Sbjct: 3 YGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAHG-GRGNSS 61
Query: 82 GRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVC 141
R Y S+ + G RS++R+IV L S SWQDLKD MR+ G+VC
Sbjct: 62 SRDRYSSHS----------NGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVC 111
Query: 142 YADA-HKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
++ H G+V++ + DMK A+ KLD++E
Sbjct: 112 FSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEF 146
>gi|358336433|dbj|GAA54942.1| splicing factor arginine/serine-rich 1/9 [Clonorchis sinensis]
Length = 251
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
TK+Y+G LP V+ RD+E YG I ++ LK+ F F+EFED DA DAV +G
Sbjct: 6 TKIYVGNLPPDVKTRDVENLFSKYGPIAEIDLKSRRGPPFAFIEFEDELDAADAVRGRDG 65
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
+ G + VE +G G Y G GP RSD R++V
Sbjct: 66 YNFDGYALRVEFPRG-------GTASYNGSGGNFNSFRRGGFGRGGGGPSRRSDFRVVVT 118
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+V YAD + GVVEF DMK A+ KLD+++
Sbjct: 119 GLPPTGSWQDLKDHMREAGDVGYADVFR--DGTGVVEFLRYEDMKYAVRKLDDSKF 172
>gi|412989158|emb|CCO15749.1| predicted protein [Bathycoccus prasinos]
Length = 347
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 105/235 (44%), Gaps = 27/235 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
+++G LP +RER+L+ YGRI + + F F+EFED RDA+DA Y +G
Sbjct: 17 IFVGNLPLDIRERELDDLFYKYGRIVHIKMPRCNHPPAFAFIEFEDKRDAEDAQYYRDGY 76
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRA------------PPPRRGWGHDRDDRYGP 108
G R+ VEI+KG G RG G +
Sbjct: 77 EFDGNRLRVEISKGSSGGGGFGGTRDDRGGGERGGRGGGRFGGSADERGGGRGGRGSFER 136
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAH---KRHRNEGVVEFESSSDMKK 165
P R++ ++V NL R SWQDLKDF R+ G+V YA+A G V+FE +D +
Sbjct: 137 PRRTEFCVVVRNLPPRASWQDLKDFFRRSGKVTYANAFIDSNTGEQIGEVDFEYLTDAEN 196
Query: 166 ALDKLDNAELNGR------RIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSK 214
A D D E R + L K GGG G+ R S+ ++ + S K
Sbjct: 197 ACDDCDGIEFENRFGVSKIQCDLKSFKKEGGG-GKRRYSNDEDDYRNNNNINSKK 250
>gi|156096635|ref|XP_001614351.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803225|gb|EDL44624.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 778
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 13/185 (7%)
Query: 4 TKVYIGGLPYGVRERDLE-KFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
K+++G + RE D+ KF+K YG I ++ K F F+E+E A+ A+ E NG+
Sbjct: 225 CKIFVGNISPEAREEDVRRKFLK-YGDIVNMQWKTRFAFIEYEKTSHAEIAIKEENGQFF 283
Query: 63 LGERVTVEIAKGIDRSQER--GRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
GE + V+ + R R Y PP R + +R++ ++ R++V+N
Sbjct: 284 FGEELNVQPHHAGNYFHNRSDNRSFY-----PPYGRTYSPNRNE--SREKKNALRIVVKN 336
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE--GVVEFESSSDMKKALDKLDNAELNGR 178
+ + SWQDLKDF R VG V YA+ + E G++E+ +S +KKA++ L+ + NG
Sbjct: 337 IDEKASWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEYYNSETVKKAVEVLNGRKFNGL 396
Query: 179 RIRLI 183
+ ++
Sbjct: 397 AVEVM 401
>gi|399217969|emb|CCF74856.1| unnamed protein product [Babesia microti strain RI]
Length = 385
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
KV++G +P +L+ + G + ++ F F+E+ A DA+ +LNG L
Sbjct: 173 CKVFVGNIPLDTTVDELKAVFEKCGELVKCDMRKRFAFIEYHKPESASDALNQLNGYILH 232
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
GE++ V K + R R + PPPR G + + V N+
Sbjct: 233 GEKIKV---KPHSDNSNRYRE-----KVPPPRHKPG--------------YAVTVANIEE 270
Query: 124 RVSWQDLKDFMRQVGEVCYAD-AHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
SWQDLKDF R GEV YA K + GV+E+ + K AL +L ++ ++ +
Sbjct: 271 TTSWQDLKDFGRLAGEVSYASIVIKDGKKYGVIEYLAPESAKNALVELQGKQITNNKLEI 330
Query: 183 IEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSR 221
IE G G+S + + S + RS SR + R R
Sbjct: 331 IE----GSIIGKSSVTGANSECEERSNSRELSTNGKRFR 365
>gi|384252888|gb|EIE26363.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 343
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 102/212 (48%), Gaps = 38/212 (17%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYEL 57
G +++G LP VRER++E YGRIR++ LK F FVEFE A+DAV
Sbjct: 5 GCVIFVGNLPGDVREREIEDLFYKYGRIRNIDLKLPPRPPAFAFVEFEKPSHAEDAVKGR 64
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD-----------RY 106
+G + VE+++G + G + G+ PPR DRD+ R
Sbjct: 65 DGYVFDNNPIRVELSRGGMGGRSGGDKTSGA----PPR-----DRDEPRGGGGGATFGRA 115
Query: 107 GPPTR--------SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK-RHRNEGVVEF 157
PP S +R V+NL SWQDLKD R+V Y + + R GVVEF
Sbjct: 116 APPPVPSNFRQKGSAYRATVKNLPMSASWQDLKDHFRKVCTPNYVNVFRDRGGVLGVVEF 175
Query: 158 ESSSDMKKALDKLDNAELNG----RRIRLIED 185
++ D+ +A+ KLD+ E IR+++D
Sbjct: 176 DTPEDLARAIRKLDDTEFRNPFERAYIRVVDD 207
>gi|224035793|gb|ACN36972.1| unknown [Zea mays]
gi|413950156|gb|AFW82805.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878164|gb|AGE46045.1| arginine/serine-rich splicing factor RS2Z39 transcript III [Zea
mays]
gi|448878166|gb|AGE46046.1| arginine/serine-rich splicing factor RS2Z39 transcript IV [Zea
mays]
Length = 353
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
GT++Y+G L R RDLE YGRIR+V LK + F+EF D+RDAD+A Y+L+G+ +
Sbjct: 10 GTRLYVGRLATRTRSRDLEHLFGRYGRIREVELKRDYAFIEFSDHRDADEARYQLDGRDV 69
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R R G R PPP G
Sbjct: 70 DGSRIVVEFAKGVPRGSGGSREYMG--RGPPPGTG 102
>gi|170108674|ref|XP_001885545.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164639421|gb|EDR03692.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 568
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRI--RDVILK-----NGFGFVEFEDYRDADDAVYE 56
+VY+G L Y V+ RDL +F++G G + +V++ G G VEF DA AV E
Sbjct: 164 NRVYVGNLSYEVKYRDLMEFMRGAGEVLFAEVLVTPTGVSKGCGIVEFASQEDAQRAVRE 223
Query: 57 LNGKSLLGERVTV----EIAKGIDRSQERGRRGY-----GSYRAPPPRRGWGHDRDDRYG 107
L+ + LLG V + E + G+ G G + APPPR + +G
Sbjct: 224 LSEQPLLGRPVFIREDRETEARFGATPVPGKIGMAMAGQGLHAAPPPRP----PSHNYFG 279
Query: 108 PPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYAD----AHKRHRNEGVVEFESSSDM 163
++L V NL + WQDLKD R G + AD A R + G V FE+ D
Sbjct: 280 TQANPGNQLYVGNLPYQAGWQDLKDLFRTAGNIIRADINIGADGRPKGSGTVVFETPKDA 339
Query: 164 KKALDKLDNAELNGRRIRLIEDKPRG 189
++A+ + GR + + ED+ G
Sbjct: 340 QQAISMYHGFDWYGRTLEVREDRYAG 365
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKR----HRNEGVV 155
H+ + ++ ++R+ V NLS V ++DL +FMR GEV +A+ + G+V
Sbjct: 150 HEEAVEFAKISKRENRVYVGNLSYEVKYRDLMEFMRGAGEVLFAEVLVTPTGVSKGCGIV 209
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
EF S D ++A+ +L L GR + + ED+
Sbjct: 210 EFASQEDAQRAVRELSEQPLLGRPVFIREDR 240
>gi|261194216|ref|XP_002623513.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
gi|239588527|gb|EEQ71170.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
Length = 258
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 22/150 (14%)
Query: 37 NGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRR 96
+GFGF+E+ED DA D V +G GER+TV+ A+G R +E AP PRR
Sbjct: 2 SGFGFIEYEDAMDAKDVV--PDGTDFKGERLTVQFARGP-RHKETFSGPSDRSSAPRPRR 58
Query: 97 GWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVV 155
+ +R+ + L SWQDLKDF RQ G +V Y++ H G V
Sbjct: 59 ---------------TIYRMQISGLPE-TSWQDLKDFARQSGLDVVYSETG--HDGRGFV 100
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIED 185
EFE+ SD+K A++KLD E G R+ +D
Sbjct: 101 EFETGSDLKTAVEKLDGREFKGSRVLCTQD 130
>gi|389747840|gb|EIM89018.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 540
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRI--RDVILK-----NGFGFVEFEDYRDADDAVYE 56
+VY+G L Y V+ RDL +F++G G + +V++ G G VEF + DA AV E
Sbjct: 141 NRVYVGNLSYDVKYRDLMEFMRGAGEVLFAEVLITPTGISKGCGIVEFASHEDAMRAVKE 200
Query: 57 LNGKSLLGERVTVEIAKGIDRSQE-------------RGRRGYGSYRAPPPRRGWGHDRD 103
L+ LLG V + DR E G G + APPPR + +
Sbjct: 201 LSESPLLGRPVFIRE----DRENESRFGATPVPGKIGMAMAGQGLHAAPPPRPAF---HN 253
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYAD----AHKRHRNEGVVEFES 159
G ++L V NL + WQDLKD R+ G + AD A R + G V +E+
Sbjct: 254 TFGGAGHNPGNQLYVGNLPYQAGWQDLKDLFREAGNIVRADINIGADGRPKGSGTVIYET 313
Query: 160 SSDMKKALDKLDNAELNGRRIRLIEDKPRG 189
+ D + A++ + GR + + ED+ G
Sbjct: 314 AKDAQSAINMFNGHNWYGRMLEVREDRFAG 343
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKR----HRNEGVV 155
H+ + ++ ++R+ V NLS V ++DL +FMR GEV +A+ + G+V
Sbjct: 127 HEEAVEFAKQSKRENRVYVGNLSYDVKYRDLMEFMRGAGEVLFAEVLITPTGISKGCGIV 186
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
EF S D +A+ +L + L GR + + ED+
Sbjct: 187 EFASHEDAMRAVKELSESPLLGRPVFIREDR 217
>gi|124802009|ref|XP_001347332.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23494910|gb|AAN35245.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 880
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 24/194 (12%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
K+++G + RE D+ + + YG I + K F F+E+ A +A+ + NGK
Sbjct: 330 ACKIFVGNISSSAREEDVRRRFEQYGDIMHMQWKKRFAFIEYYKASHALNALEKENGKMF 389
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDR-YGPPTRSDH------- 114
GE ++V+ + SY R H + R Y PP S+
Sbjct: 390 FGEELSVQ----------EHQYNMNSYGYKNDNRSHFHLKVSRNYSPPNFSNESIERRNS 439
Query: 115 -RLIVENLSSRVSWQDLKDFMRQVGEVCYA----DAHKRHRNEGVVEFESSSDMKKALDK 169
R++V+N+ + SWQDLKDF R+VG V YA D H + + G++EF + + K A++
Sbjct: 440 LRIVVKNIDEKASWQDLKDFGREVGSVSYANIVDDYHSKEK-FGIIEFYNHENAKDAINI 498
Query: 170 LDNAELNGRRIRLI 183
L+ GR + +I
Sbjct: 499 LNGKSFYGRSVDVI 512
>gi|17861940|gb|AAL39447.1| HL03687p [Drosophila melanogaster]
gi|25010013|gb|AAN71172.1| GH12433p [Drosophila melanogaster]
gi|25012830|gb|AAN71505.1| RH01580p [Drosophila melanogaster]
gi|28416383|gb|AAO42664.1| GH08123p [Drosophila melanogaster]
Length = 216
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ ELNGRRI L+ED
Sbjct: 1 MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVED 52
>gi|195329206|ref|XP_002031302.1| GM24119 [Drosophila sechellia]
gi|195571103|ref|XP_002103543.1| GD18918 [Drosophila simulans]
gi|194120245|gb|EDW42288.1| GM24119 [Drosophila sechellia]
gi|194199470|gb|EDX13046.1| GD18918 [Drosophila simulans]
Length = 191
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ ELNGRRI L+ED
Sbjct: 1 MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVED 52
>gi|242089323|ref|XP_002440494.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|241945779|gb|EES18924.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|448878296|gb|AGE46111.1| arginine/serine-rich splicing factor RS2Z39 [Sorghum bicolor]
Length = 341
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
GT++Y+G L R RDLE YGRIR+V LK + F+EF D+RDAD+A Y+L+G+ +
Sbjct: 10 GTRLYVGRLAPRTRSRDLEYLFGRYGRIREVELKRDYAFIEFSDHRDADEARYQLDGRDV 69
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R R G R PPP G
Sbjct: 70 DGSRIVVEFAKGVPRGPGGSREYMG--RGPPPGTG 102
>gi|195500861|ref|XP_002097555.1| GE26286 [Drosophila yakuba]
gi|194183656|gb|EDW97267.1| GE26286 [Drosophila yakuba]
Length = 218
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ ELNGRRI L+ED
Sbjct: 1 MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVED 52
>gi|194901398|ref|XP_001980239.1| GG19774 [Drosophila erecta]
gi|190651942|gb|EDV49197.1| GG19774 [Drosophila erecta]
Length = 217
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
MRQ GEV YADAHK+ RNEGVVEF S SDMK A++KLD+ ELNGRRI L+ED
Sbjct: 1 MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVED 52
>gi|356572371|ref|XP_003554342.1| PREDICTED: uncharacterized protein LOC100789337 [Glycine max]
Length = 297
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 114/248 (45%), Gaps = 42/248 (16%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE+ YGRIR V +KN F FVEF D RDADDA Y L+G+ +
Sbjct: 11 TRLYVGRLSSRTRSRDLERVFSRYGRIRGVDMKNDFAFVEFSDPRDADDARYSLDGRDVE 70
Query: 64 GERVTVEIAKGIDR-SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
G R+ VE AKG R S+E RG PP G R + I + +
Sbjct: 71 GSRIIVEFAKGGPRGSRENLGRGL------PPGSG-------------RCFNCGIDGHWA 111
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
D K+ + GE G +E + KK + +GR +
Sbjct: 112 RDCKAGDWKNKCYRCGE------------RGHIEKNCKNSPKK-------SSRHGRSLSR 152
Query: 183 IEDKPRGGGRGRSRS-SSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKAKSVSRSP 241
+ RGRSR S SR R+ SRSRS + RSP S +S SP SK + S SP
Sbjct: 153 SPVRSHSPRRGRSRDRSYSRDRNYSRSRSPVRRERSPVSEDRSQSPEPSKIRKHST--SP 210
Query: 242 SPSKTRKR 249
S RKR
Sbjct: 211 DQSSPRKR 218
>gi|195624410|gb|ACG34035.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878160|gb|AGE46043.1| arginine/serine-rich splicing factor RS2Z39 transcript I [Zea mays]
Length = 353
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
GT++Y+G L R RDLE YGRIR+V LK + F+EF D+RDAD+A Y+L+G+ +
Sbjct: 10 GTRLYVGRLATRTRSRDLEHLFGRYGRIREVELKRDYAFIEFSDHRDADEARYQLDGRDV 69
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R R G R PPP G
Sbjct: 70 DGSRIVVESAKGVPRGSGGSREYMG--RGPPPGTG 102
>gi|347972227|ref|XP_003436862.1| AGAP004592-PI [Anopheles gambiae str. PEST]
gi|333469352|gb|EGK97263.1| AGAP004592-PI [Anopheles gambiae str. PEST]
Length = 214
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 45/52 (86%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
MRQ GEV YADAHK+ +NEGVVEF + SDMK A++KLD+ ELNGRRIRL+ED
Sbjct: 1 MRQAGEVTYADAHKQRKNEGVVEFATLSDMKTAIEKLDDTELNGRRIRLVED 52
>gi|70943756|ref|XP_741887.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520548|emb|CAH80503.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 562
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 103/192 (53%), Gaps = 12/192 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
K+++G + RE ++ + YG I ++ K F F+E+ A++A++E NGK +
Sbjct: 141 CKIFVGNISPDAREEEVRRKFAKYGDIINIQWKRRFAFIEYSKPIYAENAIHEENGKHYM 200
Query: 64 GERVTVEIAK-GIDRSQERGRRG--YGSYRAPPPRRGWGHDR---DDRYGPPTRSDH-RL 116
GE ++V+ ++ G G Y +Y++ P + R D+++ + + R+
Sbjct: 201 GEELSVQAHHLSPFKNSYSGNYGNSYNNYKSDPRNYENKYSRNYSDNKFESIEKKNSLRI 260
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-----GVVEFESSSDMKKALDKLD 171
+V+N+ +VSWQDLKDF R+VG V YA+ + G++E+ + MK+A++ L+
Sbjct: 261 VVKNIDEKVSWQDLKDFGREVGSVNYANVIYNNNGNNKEWYGIIEYYNYETMKRAVEVLN 320
Query: 172 NAELNGRRIRLI 183
+ NG + +I
Sbjct: 321 GKKFNGVPVEVI 332
>gi|195611398|gb|ACG27529.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223973611|gb|ACN30993.1| unknown [Zea mays]
gi|413942175|gb|AFW74824.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413942176|gb|AFW74825.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|448878178|gb|AGE46052.1| arginine/serine-rich splicing factor RS2Z37B transcript I [Zea
mays]
Length = 333
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
GT++Y+G L R RDLE YGRIR+V LK + F+EF ++RDAD+A Y+L+G+ +
Sbjct: 10 GTRLYVGRLAPRTRSRDLEYLFGKYGRIREVELKRDYAFIEFSEHRDADEARYQLDGRDV 69
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R R G R PPP G
Sbjct: 70 DGSRIVVEFAKGVPRGPGGSREYMG--RGPPPGTG 102
>gi|449451689|ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like
isoform 1 [Cucumis sativus]
gi|449451691|ref|XP_004143595.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like
isoform 2 [Cucumis sativus]
gi|449507559|ref|XP_004163066.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like
isoform 1 [Cucumis sativus]
gi|449507562|ref|XP_004163067.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like
isoform 2 [Cucumis sativus]
Length = 309
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
GT++Y+G L R RDL+ YGR+RDV +K + FVEF D RDADDA Y LNG+ +
Sbjct: 10 GTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDV 69
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPP 93
G R+ VEIAKG+ R R G R PP
Sbjct: 70 HGSRIIVEIAKGVPRGPGGSREYLG--RGPP 98
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 96/200 (48%), Gaps = 29/200 (14%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNG 59
GTKV++G L ERDL +G + V + +N GF FV F D RDA DAV E++G
Sbjct: 6 GTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDAGDAVREIDG 65
Query: 60 KSLLGERVTVEIA--------------KGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDR 105
KS+ G VE++ G G G G PR G
Sbjct: 66 KSIAGREWRVEVSHQRGRDRGPPGGGYGGGGGGGGYGGGGGGGGGYGAPRVG-------- 117
Query: 106 YGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKK 165
G R+ +++ + L + W +LKDF+R+ G+V YAD +EGV EF + DM +
Sbjct: 118 -GAAPRTGYKVRITGLPEGMRWSELKDFVRKAGDVTYADVRG---DEGVAEFSNRDDMSR 173
Query: 166 ALDKLDNAELNGRRIRLIED 185
A+ +LD+ RRIR+ D
Sbjct: 174 AVRELDDTYFADRRIRVDYD 193
>gi|340371197|ref|XP_003384132.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Amphimedon
queenslandica]
Length = 242
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----GFGFVEFEDYRDADDAVYELNG 59
KVY+G LP +R+RDLE YG++ DV L + F F+EFED RDADDA+ +G
Sbjct: 9 CKVYVGNLPGDIRKRDLEDIFYKYGKLVDVDLHDRRETPFAFIEFEDPRDADDAIRGRDG 68
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G ++ VE+ + R G Y R G+G + G H+L++
Sbjct: 69 YMFDGYKLRVELPRSSPRYVGGRGGGGRGYYGGGRRDGYGRGGGRQSG------HKLMIT 122
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQD+KD RQ G+V YA+ + GVVEF K+A+ LD+++
Sbjct: 123 GLPPTGSWQDIKDHFRQAGDVIYANVER--DGTGVVEFARYEHAKRAVRDLDDSKF 176
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGRIR+V LK + F+EF D RDADDA Y L+G+ +
Sbjct: 11 TRLYVGRLSPRTRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPRDADDAQYNLDGRDVD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R G R Y R PPP G
Sbjct: 71 GSRIIVEFAKGVPRGSG-GSRDYNG-RGPPPGTG 102
>gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays]
Length = 150
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 15/147 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG+I D+ LK G+ FVEFED RDA++A+ +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE A G G G+ + G+G R G S++R++V
Sbjct: 69 NFDGHRLRVEAAHG----------GRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTG 118
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHK 147
L S SWQDLKD MR+ G+VC+++ ++
Sbjct: 119 LPSSASWQDLKDHMRKAGDVCFSEVYR 145
>gi|356505156|ref|XP_003521358.1| PREDICTED: uncharacterized protein LOC100812698 [Glycine max]
Length = 287
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE+ YGR+R V +KN F FV+F D RDADDA Y L+G+ +
Sbjct: 11 TRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKNDFAFVDFSDPRDADDARYNLDGRDVD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G R+ VE AKG RG R Y R PPP
Sbjct: 71 GSRIIVEFAKGA----PRGSREYLG-RGPPP 96
>gi|218192579|gb|EEC75006.1| hypothetical protein OsI_11073 [Oryza sativa Indica Group]
Length = 294
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGRIR+V LK + F+EF D RDAD+A Y L+G+ +
Sbjct: 11 TRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKRDYAFIEFSDTRDADEARYNLDGRDVD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R G R Y R PPP G
Sbjct: 71 GSRILVEFAKGVPRGAAGGSREYMG-RGPPPGTG 103
>gi|348666125|gb|EGZ05953.1| hypothetical protein PHYSODRAFT_348578 [Phytophthora sojae]
Length = 356
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 38/200 (19%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYG--RIRDVILKNG----FGFVEFEDYRDADDAVY 55
VG +VY+G L + ++ +DL+ ++ G + V+ NG G V +E A +A+
Sbjct: 87 VGCRVYVGNLSWSIKWQDLKDHMQAAGPVELATVLESNGRSKGCGIVTYETEEAAQNAIA 146
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
LN L G ++ V R R A P+RG+ R
Sbjct: 147 TLNDTELGGRKIFV-----------REDREAQPVSAVKPKRGF----------------R 179
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKKALDKLD 171
+ V NLS V WQ+LKD M++ G V +AD + R + G+VE+ + + KA+ +L+
Sbjct: 180 VYVGNLSWNVKWQELKDHMKKAGTVVHADVLEEPNGRSKGCGLVEYATQEEAAKAIAELN 239
Query: 172 NAELNGRRIRLIED-KPRGG 190
N EL GR I + ED +P GG
Sbjct: 240 NTELEGRLIFVREDREPEGG 259
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 28/195 (14%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRI--RDVILK-----NGFGFVEFEDYRDADDAVY 55
G +VY+G L + V+ ++L+ +K G + DV+ + G G VE+ +A A+
Sbjct: 177 GFRVYVGNLSWNVKWQELKDHMKKAGTVVHADVLEEPNGRSKGCGLVEYATQEEAAKAIA 236
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
ELN L G + V DR E G + RA PR G G R +
Sbjct: 237 ELNNTELEGRLIFVRE----DREPEGGSISKFAKRAAAPR-GSGEGR------------Q 279
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHK----RHRNEGVVEFESSSDMKKALDKLD 171
L V NL +WQ LKD R VG+V AD + R R G++ + +++D +A+++L+
Sbjct: 280 LYVGNLPWETNWQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLN 339
Query: 172 NAELNGRRIRLIEDK 186
E+ GR I + DK
Sbjct: 340 GLEIEGRLIEVRLDK 354
>gi|363807264|ref|NP_001242616.1| uncharacterized protein LOC100813237 [Glycine max]
gi|255647309|gb|ACU24121.1| unknown [Glycine max]
Length = 299
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE+ YGR+R V +KN F FVEF D RDADDA Y L+G+ +
Sbjct: 11 TRLYVGRLSSRTRSRDLERVFSRYGRVRGVDMKNDFAFVEFSDPRDADDARYNLDGRDVE 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G R+ VE AKG R R R G R PPP
Sbjct: 71 GSRIIVEFAKGGPRGS-RDREYMG--RGPPP 98
>gi|356572373|ref|XP_003554343.1| PREDICTED: uncharacterized protein LOC100789862 [Glycine max]
Length = 287
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE+ YGR+R V +KN F FV+F D RDADDA Y L+G+ +
Sbjct: 11 TRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKNDFAFVDFSDPRDADDARYNLDGRDVD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G R+ VE AKG RG R Y R PPP
Sbjct: 71 GSRIIVEFAKGA----PRGSREYLG-RGPPP 96
>gi|226491636|ref|NP_001143694.1| uncharacterized protein LOC100276428 [Zea mays]
gi|195620112|gb|ACG31886.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878170|gb|AGE46048.1| arginine/serine-rich splicing factor RS2Z39 transcript VI [Zea
mays]
Length = 353
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
GT++Y+ L R RDLE YGRIR+V LK + F+EF D+RDAD+A Y+L+G+ +
Sbjct: 10 GTRLYVSRLATRTRSRDLEHLFGRYGRIREVELKRDYAFIEFSDHRDADEARYQLDGRDV 69
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R R G R PPP G
Sbjct: 70 DGSRIVVEFAKGVPRGSGGSREYMG--RGPPPGTG 102
>gi|212723432|ref|NP_001132009.1| uncharacterized protein LOC100193414 [Zea mays]
gi|194693184|gb|ACF80676.1| unknown [Zea mays]
gi|413942172|gb|AFW74821.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
gi|448878186|gb|AGE46056.1| arginine/serine-rich splicing factor RS2Z35 transcript I [Zea mays]
Length = 314
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGRIR+V LK + F+EF D RDADDA Y L+G+ +
Sbjct: 11 TRLYVGRLAPRTRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPRDADDAQYNLDGREVD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R R G R PPP G
Sbjct: 71 GSRIIVEFAKGVPRGSGGSREYMG--RGPPPGTG 102
>gi|402581303|gb|EJW75251.1| alternative splicing regulator, partial [Wuchereria bancrofti]
Length = 217
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 109/236 (46%), Gaps = 39/236 (16%)
Query: 41 FVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGH 100
F + ED RDA DAV+ +G G R+ VE+ +G+ GR YG
Sbjct: 1 FGKLEDCRDARDAVHGRDGYDFDGCRIRVELTRGVGPRGPGGRPLYGP----------DP 50
Query: 101 DRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESS 160
R PP RS +R+IV L SWQDLKD MR GE+CYAD + GVVE+ +
Sbjct: 51 RSPRRGPPPRRSGYRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFR--DGTGVVEYTNY 108
Query: 161 SDMKKALDKLDNAELNGRR-----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKS 215
DMK AL KLD+ + IR+ E R RSRS + R ++RSS
Sbjct: 109 EDMKYALRKLDDTKFKSHEGEVTYIRVKEANINSPNRSRSRSHTPR-------KTRSSPK 161
Query: 216 RSPRSRSKSGSP--------------RKSKSKAKSVSRSPSPSKTRKRSRSRSDSR 257
SP R+S S S S S SPSKTR ++RSRS SR
Sbjct: 162 YSPTRSPSKSRSRSSRSRSHSRTSFVRRSTSPVHS-SNSRSPSKTRSKTRSRSGSR 216
>gi|115452341|ref|NP_001049771.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|108707560|gb|ABF95355.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548242|dbj|BAF11685.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|222624706|gb|EEE58838.1| hypothetical protein OsJ_10413 [Oryza sativa Japonica Group]
Length = 330
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGRIR+V LK + F+EF D RDAD+A Y L+G+ +
Sbjct: 11 TRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKRDYAFIEFSDPRDADEARYNLDGRDVD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R G R Y R PPP G
Sbjct: 71 GSRILVEFAKGVPRGAAGGSREYMG-RGPPPGTG 103
>gi|359486310|ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGR+RDV +K+ F FVEF D RDADDA Y LNG+
Sbjct: 11 TRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKHDFAFVEFSDPRDADDARYSLNGRDFD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G R+ VE AKG R R G R PPP
Sbjct: 71 GSRIIVEFAKGGPRGPGGSREYLG--RGPPP 99
>gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum]
gi|226469552|emb|CAX76606.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469554|emb|CAX76607.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469556|emb|CAX76608.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469558|emb|CAX76609.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469560|emb|CAX76610.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469562|emb|CAX76611.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469564|emb|CAX76612.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472960|emb|CAX71166.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472964|emb|CAX71168.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472966|emb|CAX71169.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 225
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG------FGFVEFEDYRDADDAVYELN 58
K+Y+G LP + RD+E YG I + LK G F FVEFED DA DAV +
Sbjct: 7 KIYVGNLPPDAKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRD 66
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G + G + VE+ + + G +R GP RSD R+IV
Sbjct: 67 GYNFDGYALRVELPRTGSYNNGNGGPNNNQFRR---GGFNRGGGGGSSGPSRRSDFRVIV 123
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
L SWQDLKD MR+ G+V YAD + GVVEF DMK A+ +LD+++
Sbjct: 124 TGLPPTGSWQDLKDHMREAGDVGYADVFR--DGTGVVEFLRYEDMKYAIRRLDDSKFRSH 181
Query: 179 R-----IRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPR 219
IR+ E+ R GG RSRS S S + RS S+S SPR
Sbjct: 182 EGESSYIRVREE--RAGGS-RSRSRSYDSPRRGRSYDSCSRSISPR 224
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YG I + LK G+ FVEFE+ RDA+DA+ +G
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R+ VE+A G G G + G R G RS++R++V
Sbjct: 69 DFDGHRLRVELAHG----------GRGHSSSDRHSSYSGSGGRGRGGVSRRSEYRVVVTG 118
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHR-NEGVVEFESSSDMKKAL 167
L S SWQDLKD MR+ G+VC++ + G+V++ + DMK A+
Sbjct: 119 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAV 166
>gi|225439817|ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
Length = 307
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
T++Y+G L R RDLE YGR+RDV +K+ F FVEF D RDADDA Y LNG+
Sbjct: 10 NTRLYVGRLSSRTRTRDLESLFSRYGRVRDVDMKHDFAFVEFSDPRDADDARYNLNGRDF 69
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G R+ VE AKG R G R Y R PPP
Sbjct: 70 DGSRIIVEFAKGGPRGGSGGSREYLG-RGPPP 100
>gi|357132692|ref|XP_003567963.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 319
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGR+R V +K+ F FVEF D RDADDA Y L+G+
Sbjct: 14 TRLYVGRLSSRTRSRDLEDLFGRYGRVRYVDMKHEFAFVEFSDPRDADDARYNLDGRDFD 73
Query: 64 GERVTVEIAKGIDRSQ----ERGRRGYGSY--RAPPP 94
G R+ VE AKG+ R Q +R R G Y R PPP
Sbjct: 74 GSRMIVEFAKGVPRGQGGSRDRDRGGDREYMGRGPPP 110
>gi|227206256|dbj|BAH57183.1| AT4G02430 [Arabidopsis thaliana]
Length = 176
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 23 FVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDR 77
F YG + + LK G+ FVEFED RDADDA+Y +G G + VE+A G R
Sbjct: 24 FFLKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVELAHGGRR 83
Query: 78 SQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQV 137
S R Y G GP RS++R++V L S SWQDLKD MR+
Sbjct: 84 SSHDARGSYSGRGRGGRGGG--DGGGRERGPSRRSEYRVVVSGLPSSASWQDLKDHMRKG 141
Query: 138 GEVCYADAHKRHR-NEGVVEFESSSDMKKALDK 169
GEVC++ + R G+V++ S DMK A+ K
Sbjct: 142 GEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKK 174
>gi|388582392|gb|EIM22697.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 326
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 90/202 (44%), Gaps = 28/202 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVK--GYGRIRDVI----------LKNGFGFVEFEDYRDAD 51
+VY+G L Y V+ DL+ F + G++ +V L G G VEF A
Sbjct: 10 NRVYVGNLNYEVKSEDLKSFFQDNAEGQVLEVASAEVLITPNGLSKGCGIVEFTSPESAQ 69
Query: 52 DAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDD-RYGPPT 110
A+ + KSLLG V V DR QE R G P P R +R GPP
Sbjct: 70 IAIESFSDKSLLGRPVFVRE----DREQE-ARFGAN----PTPSRSQQFNRGPYNPGPPQ 120
Query: 111 RSD--HRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK----RHRNEGVVEFESSSDMK 164
+ +L V NL +V WQDLKD RQ G V AD + + G+V F S D
Sbjct: 121 NAAPGTQLFVGNLPFQVGWQDLKDLFRQAGHVVRADIQLFPDGKSKGNGIVSFSSREDAN 180
Query: 165 KALDKLDNAELNGRRIRLIEDK 186
A++ + E GR I + EDK
Sbjct: 181 NAIELYNGYEFYGRPIEVREDK 202
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 30/197 (15%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-----KNGFGFVEFEDYRDADDAVY 55
GT++++G LP+ V +DL+ + G + D+ L G G V F DA++A+
Sbjct: 125 GTQLFVGNLPFQVGWQDLKDLFRQAGHVVRADIQLFPDGKSKGNGIVSFSSREDANNAIE 184
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDR-----DDRYGPPT 110
NG G + V R + S R P R + +R
Sbjct: 185 LYNGYEFYGRPIEV-----------REDKFANSPR--PSRTPYQFNRKAPQGPAPVPAAA 231
Query: 111 RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA-----HKRHRNEGVVEFESSSDMKK 165
+ +++ +NL S +DL + G+V A+ +R R G+VEF S++
Sbjct: 232 APNPQIVSKNLPWSTSNEDLVELFETTGDVKKAEILIDSRTQRSRGVGIVEFFSTAAASV 291
Query: 166 ALDKLDNAELNGRRIRL 182
A++K + GR + +
Sbjct: 292 AIEKFNGYVYGGRPLEI 308
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 113 DHRLIVENLSSRVSWQDLKDFMR-----QVGEVCYADA----HKRHRNEGVVEFESSSDM 163
++R+ V NL+ V +DLK F + QV EV A+ + + G+VEF S
Sbjct: 9 ENRVYVGNLNYEVKSEDLKSFFQDNAEGQVLEVASAEVLITPNGLSKGCGIVEFTSPESA 68
Query: 164 KKALDKLDNAELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSK 223
+ A++ + L GR + + ED+ + +R ++ + S+S+ +R + P +
Sbjct: 69 QIAIESFSDKSLLGRPVFVREDREQ-----EARFGANPTPSRSQQFNRGPYNPGPPQNAA 123
Query: 224 SGS 226
G+
Sbjct: 124 PGT 126
>gi|301115672|ref|XP_002905565.1| RNA binding protein, putative [Phytophthora infestans T30-4]
gi|262110354|gb|EEY68406.1| RNA binding protein, putative [Phytophthora infestans T30-4]
Length = 322
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 48/205 (23%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRI--RDVILKNG----FGFVEFEDYRDADDAVY 55
VG++VY+G L + ++ +DL+ ++ G + V+ NG G V + A +A+
Sbjct: 72 VGSRVYVGNLSWSIKGQDLKDHMQAAGPVDLATVLEWNGRSKGCGIVTYATEEAAQNAIA 131
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSD-- 113
LN L G ++ V R+DR PT +
Sbjct: 132 TLNDTELGGRKIFV--------------------------------REDREAQPTATTKP 159
Query: 114 ---HRLIVENLSSRVSWQDLKDFMRQVGEVCYAD----AHKRHRNEGVVEFESSSDMKKA 166
+R+ V NLS V WQ+LKD M+ G V +AD A+ R + G+VE+ + + KA
Sbjct: 160 KRGYRVYVGNLSWNVKWQELKDHMKTAGTVVHADVLELANGRSKGCGLVEYATEDEAAKA 219
Query: 167 LDKLDNAELNGRRIRLIED-KPRGG 190
+ +L+N EL GR I + ED +P GG
Sbjct: 220 IAELNNTELEGRLIFVREDREPEGG 244
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 28/178 (15%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRI--RDVI-LKNG----FGFVEFEDYRDADDAVY 55
G +VY+G L + V+ ++L+ +K G + DV+ L NG G VE+ +A A+
Sbjct: 162 GYRVYVGNLSWNVKWQELKDHMKTAGTVVHADVLELANGRSKGCGLVEYATEDEAAKAIA 221
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
ELN L G + V DR E G + RA PR G G R +
Sbjct: 222 ELNNTELEGRLIFVRE----DREPEGGSISKFAKRASAPR-GNGEGR------------Q 264
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHK----RHRNEGVVEFESSSDMKKALDK 169
L V NL +WQ LKD R VG+V AD + R R G++ + ++ D +A+ K
Sbjct: 265 LYVGNLPWDTNWQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNAVDALQAIGK 322
>gi|307173759|gb|EFN64546.1| Splicing factor, arginine/serine-rich 1 [Camponotus floridanus]
Length = 262
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 46 DYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDD 104
D RDA+DAV+ +G G R+ VE +G S RG RG G R G G +
Sbjct: 69 DSRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGD----SGRGGRGEMSNS 124
Query: 105 RY-GPPTR-SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSD 162
R GPP R S +R++V L SWQDLKD MR+ G+VC+AD +K GVVEF D
Sbjct: 125 RGRGPPARRSQYRVLVSGLPPTGSWQDLKDHMREAGDVCFADVYK--DGTGVVEFLRHDD 182
Query: 163 MKKALDKLDNAELNGRR-----IRLIEDKPRGGGRGRS 195
MK A+ KLD++ IR+ ED GG RGRS
Sbjct: 183 MKYAVKKLDDSRFRSHEGEVAYIRVREDH-NGGDRGRS 219
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 74/140 (52%), Gaps = 19/140 (13%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP +RER++E YGRI D+ LK GF FVEFED RDA+DA+ +G
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G GR S+ R G +++R++V
Sbjct: 135 NFDGNRLRVELAHG-------GRGNSSSFNN-------SGGGGRRGGVSRHTEYRVLVTG 180
Query: 121 LSSRVSWQDLKDFMRQVGEV 140
L S SWQDLKD MR G+V
Sbjct: 181 LPSSASWQDLKDHMRNAGDV 200
>gi|297736448|emb|CBI25319.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGR+RDV +K+ F FVEF D RDADDA Y LNG+
Sbjct: 43 TRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKHDFAFVEFSDPRDADDARYSLNGRDFD 102
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G R+ VE AKG R R G R PPP
Sbjct: 103 GSRIIVEFAKGGPRGPGGSREYLG--RGPPP 131
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGR+RDV +K + FVEF D RDADDA + L+GK
Sbjct: 11 TRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRDYAFVEFSDPRDADDARHYLDGKDFD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G R+ VE AKG+ RG R Y R PPP
Sbjct: 71 GSRIIVEFAKGV----PRGSREYLG-RGPPP 96
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 74/178 (41%), Gaps = 29/178 (16%)
Query: 103 DDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSD 162
DDRY + RL V +L++R +DL+ + G V D R+ VEF D
Sbjct: 5 DDRY-----ASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMK---RDYAFVEFSDPRD 56
Query: 163 MKKALDKLDNAELNGRRI--RLIEDKPRGG----------GRGRSRSSSSRSRSKSRSRS 210
A LD + +G RI + PRG G GR + ++
Sbjct: 57 ADDARHYLDGKDFDGSRIIVEFAKGVPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 116
Query: 211 RSSKSRSPRS-------RSKSGSPRKSKSKAKSVSRSP--SPSKTRKRSRSRSDSRAR 259
K++ R R+ SP+K + +S SRSP SPS R RSRS S SR R
Sbjct: 117 GDWKNKCYRCGERGHIERNCKNSPKKLTKRGRSYSRSPDRSPSPHRGRSRSPSYSRGR 174
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVYELNG 59
+VY+G LP +R++E+ + +G+I+ +K G F FVEFED RDA DA+ E +G
Sbjct: 9 RVYVGNLPSECDQREIEEEFEKFGKIKRCDVKRGANGSSFAFVEFEDPRDAKDAIKEKDG 68
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE+ RGY S R P PRRG + + V
Sbjct: 69 YEFKGSRLRVEVP--------FSDRGY-SRRRPTPRRG---------------HYTVEVL 104
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR GE +AD + G V F S DM A++ D +
Sbjct: 105 GLPPSGSWQDLKDHMRDAGECGHADVFR--GGVGEVSFFSRRDMDAAIEMFDGSTF 158
>gi|147774947|emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]
Length = 306
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGR+RDV +K+ F FVEF D RDADDA Y LNG+
Sbjct: 11 TRLYVGRLSSRTRTRDLESLFSRYGRVRDVDMKHDFAFVEFSDPRDADDARYNLNGRDFD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G R+ VE AKG R G R Y R PPP
Sbjct: 71 GSRIIVEFAKGGPRGGSGGSREYLG-RGPPP 100
>gi|297820078|ref|XP_002877922.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
gi|297323760|gb|EFH54181.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
Length = 284
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE+ YGR+RDV +K + FVEF D RDADDA Y L+G+
Sbjct: 11 TRLYVGRLSSRTRARDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYYLDGRDFD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+TVE ++G RG R GS R PPP G
Sbjct: 71 GSRITVEASRGA----PRGSRDNGS-RGPPPGSG 99
>gi|256077396|ref|XP_002574991.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229593|emb|CCD75764.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 283
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 48/60 (80%)
Query: 128 QDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
+DLKD MR+ GEV YADAHK +N+G+VEF + +DMK+A++K D EL GRR+R+ ED+P
Sbjct: 34 EDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDGYELYGRRLRVYEDRP 93
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGR+RDV +K + FVEF D RDADDA + L+GK
Sbjct: 11 TRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRDYAFVEFSDPRDADDARHYLDGKEFD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G R+ VE AKG+ RG R Y R PPP
Sbjct: 71 GSRIIVEFAKGV----PRGSREYLG-RGPPP 96
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 28/176 (15%)
Query: 103 DDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSD 162
DDRY + RL V +L++R +DL+ + G V D R+ VEF D
Sbjct: 5 DDRY-----ASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMK---RDYAFVEFSDPRD 56
Query: 163 MKKALDKLDNAELNGRRI--RLIEDKPRGG----------GRGRSRSSSSRSRSKSRSRS 210
A LD E +G RI + PRG G GR + ++
Sbjct: 57 ADDARHYLDGKEFDGSRIIVEFAKGVPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 116
Query: 211 RSSKSRSPRS-------RSKSGSPRKSKSKAKSVSRSPSPSKTRKRSRSRSDSRAR 259
K++ R R+ SP+K ++ KS SRSP S++ R RSRS S +R
Sbjct: 117 GDWKNKCYRCGERGHIERNCKNSPKK-LTRGKSYSRSPGRSRSPHRGRSRSPSYSR 171
>gi|115436242|ref|NP_001042879.1| Os01g0316600 [Oryza sativa Japonica Group]
gi|113532410|dbj|BAF04793.1| Os01g0316600, partial [Oryza sativa Japonica Group]
Length = 178
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 13/133 (9%)
Query: 44 FEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRD 103
FED RDADDA+ +G + G R+ VE+A G GR SY P R + R
Sbjct: 1 FEDPRDADDAICGRDGYNFDGYRLRVELAHG-------GRGQSYSYDRP---RSYSSGR- 49
Query: 104 DRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRH-RNEGVVEFESSSD 162
R G RS++R++V L S SWQDLKD MR+ G+VC++D ++ G+V++ + D
Sbjct: 50 -RGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYED 108
Query: 163 MKKALDKLDNAEL 175
MK A+ KLD++E
Sbjct: 109 MKYAIRKLDDSEF 121
>gi|30693839|ref|NP_190918.3| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|75334513|sp|Q9FYB7.1|RSZ32_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z32;
AltName: Full=RS-containing zinc finger protein 32;
Short=At-RS2Z32; Short=At-RSZ32
gi|9795142|emb|CAB67657.2| splicing factor-like protein [Arabidopsis thaliana]
gi|222422875|dbj|BAH19424.1| AT3G53500 [Arabidopsis thaliana]
gi|332645577|gb|AEE79098.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 284
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE+ YGR+RDV +K + FVEF D RDADDA Y L+G+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYYLDGRDFD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+TVE ++G RG R GS R PPP G
Sbjct: 71 GSRITVEASRGA----PRGSRDNGS-RGPPPGSG 99
>gi|448878298|gb|AGE46112.1| arginine/serine-rich splicing factor R2SZ35 transcript I [Sorghum
bicolor]
Length = 312
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGRIR+V LK + F+EF D DADDA Y L+G+ +
Sbjct: 11 TRLYVGRLAPRTRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPHDADDAQYNLDGREVD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R R G R PPP G
Sbjct: 71 GSRIIVEFAKGVPRGSGGSREYMG--RGPPPGTG 102
>gi|156086366|ref|XP_001610592.1| RNA recognition motif containing protein [Babesia bovis T2Bo]
gi|154797845|gb|EDO07024.1| RNA recognition motif containing protein [Babesia bovis]
Length = 382
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 86/183 (46%), Gaps = 33/183 (18%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+KV++G L V E DL +G I + + F FV+F RDA+ A+ E+N + LL
Sbjct: 174 SKVFVGNLDGKVSEEDLTNAFSKFGPINKIDYRRNFAFVDFVKSRDAEVAMREMNERVLL 233
Query: 64 GERV-TVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
G ++ V ++ RS+ + S + V NL
Sbjct: 234 GTKLKVVPHSERSKRSETNREPDFAS--------------------------QATVLNLD 267
Query: 123 SRVSWQDLKDFMRQVGEVCYADAHKR-HRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
+ SWQDLKDF RQ GEV YA R + G+VEF S MK A++ +LNG++I
Sbjct: 268 NSASWQDLKDFARQAGEVVYASVIIRDQKRYGLVEFTSPKTMKAAVE-----QLNGKKIA 322
Query: 182 LIE 184
+ E
Sbjct: 323 VNE 325
>gi|119614893|gb|EAW94487.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_b [Homo sapiens]
Length = 230
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 33/176 (18%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++Y+G LP +R ++ F FVEFED RDA+DAVY +G
Sbjct: 16 CRIYVGNLPPDIRTKNRRG-------------GPPFAFVEFEDPRDAEDAVYGRDGYDYD 62
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWGHDRDDRYGPPTRSDHRLIVE 119
G R+ VE + + G G G PP R RS++R++V
Sbjct: 63 GYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSR--------------RSENRVVVS 108
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR+ G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 109 GLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTKF 162
>gi|388509088|gb|AFK42610.1| unknown [Medicago truncatula]
Length = 305
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE+ YG +RDV +K+ + FVEF D RDADDA Y L+G+ +
Sbjct: 11 TRLYVGRLSSRTRSRDLERVFSRYGSVRDVDMKHDYAFVEFRDPRDADDARYNLDGRDID 70
Query: 64 GERVTVEIAKGIDRS--QERGRRGYGSYRAPPP 94
G R+ VE AKG+ R R R Y R PPP
Sbjct: 71 GSRLIVEFAKGVPRGSRDSRDSREYLG-RGPPP 102
>gi|388495254|gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
T++Y+G L R RDLE+ YGR+RDV +K + FVEF D RDADDA Y L+G+ +
Sbjct: 10 NTRLYVGRLSSRTRSRDLERVFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYNLDGRDV 69
Query: 63 LGERVTVEIAKGI 75
G R+ VE AKG+
Sbjct: 70 DGSRLIVEFAKGV 82
>gi|326512990|dbj|BAK03402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
TK+Y+G L R +D+E YGRIR V LK+ +GFVEF + RDADDA YEL+G+ +
Sbjct: 39 TKLYVGHLSTHTRTKDVEYLFGRYGRIRCVELKHDYGFVEFSNPRDADDARYELDGQDVD 98
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE A+G R R G R PPP G
Sbjct: 99 GSRIIVEFARGTPRGPGGSREYLG--RGPPPGSG 130
>gi|299741815|ref|XP_001832059.2| RNP domain-containing protein [Coprinopsis cinerea okayama7#130]
gi|298404895|gb|EAU89705.2| RNP domain-containing protein [Coprinopsis cinerea okayama7#130]
Length = 588
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVI-----LKNGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ RDL +F++G G + +V+ + G G VEF DA A+ EL
Sbjct: 180 RVYVGNLSYDVKYRDLIEFMRGAGEVLFAEVLVTPTGISKGCGIVEFASQEDAQRAIREL 239
Query: 58 NGKSLLGERVTVEIAKGIDRSQE-------------RGRRGYGSYRAPPPRRGWGHDRDD 104
+ + LLG V + DR E G G + APPPR H+
Sbjct: 240 SEQPLLGRPVFIRE----DRENEARFGATPVPGKIGMAMAGQGLHAAPPPRPP-SHNYFS 294
Query: 105 RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAH----KRHRNEGVVEFESS 160
++L V NL + WQDLKD R G + AD + R + G V FE+
Sbjct: 295 GGPGGGNPGNQLYVGNLPYQAGWQDLKDLFRAAGSIVRADINIGVDGRPKGSGTVVFETV 354
Query: 161 SDMKKALDKLDNAELNGRRIRLIEDKPRG 189
D ++A+ + + GR + + ED+ G
Sbjct: 355 KDAQQAISMYNGFDWYGRILEVREDRYAG 383
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKR----HRNEGVV 155
H+ + ++ ++R+ V NLS V ++DL +FMR GEV +A+ + G+V
Sbjct: 165 HEEAMEFAKISKRENRVYVGNLSYDVKYRDLIEFMRGAGEVLFAEVLVTPTGISKGCGIV 224
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
EF S D ++A+ +L L GR + + ED+
Sbjct: 225 EFASQEDAQRAIRELSEQPLLGRPVFIREDR 255
>gi|254582016|ref|XP_002496993.1| ZYRO0D12892p [Zygosaccharomyces rouxii]
gi|238939885|emb|CAR28060.1| ZYRO0D12892p [Zygosaccharomyces rouxii]
Length = 411
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 37/184 (20%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++++ P+ V+E +L + +G +++V + NGF FVEFE+ A A+ E+NGK+
Sbjct: 128 TRLFVRPFPFDVQEAELNEIFTPFGPMKEVKILNGFAFVEFEEAESAARAIEEVNGKTFA 187
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
+ + V +K PP+R +R+++ NL
Sbjct: 188 NQPLEVMYSKL------------------PPKR-----------------YRIVLRNLPE 212
Query: 124 RVSWQDLKDFMRQVG-EVCYADAHKRHRN-EGVVEFESSSDMKKALDKLDNAELNGRRIR 181
SWQ+LKD R+ E ++ + R + G +EF + ++ AL++L+N E G I
Sbjct: 213 GCSWQELKDLARENSLETTFSSVNTRDFDGTGALEFPNEEILQDALERLNNIEFRGSVIA 272
Query: 182 LIED 185
+ +D
Sbjct: 273 VEKD 276
>gi|68071193|ref|XP_677510.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497656|emb|CAH99031.1| conserved hypothetical protein [Plasmodium berghei]
Length = 463
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 103/203 (50%), Gaps = 34/203 (16%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
K+++G + +E ++ K YG I ++ K F F+E+ A++A++E NGK +
Sbjct: 252 CKIFVGNISPDAKEEEVRKKFAKYGDIINIQWKGRFAFIEYSKPVYAENAIHEENGKHYM 311
Query: 64 GERVTVEIAKGID--RSQERGRRG--YGSYRAPPPRRGWGHDR---DDRYGPPTRSDH-R 115
GE ++V+ A + ++ G G Y SY+ P + R D+++ + + R
Sbjct: 312 GEELSVQ-AHHLSPFKNNYSGSYGNVYNSYKNDPRNYENKYSRNYPDNKFESIEKKNSLR 370
Query: 116 LIVENLSSRVSWQDLKDFMRQVG---------------EVCYADAHKRHRNEGVVEFESS 160
++V+N+ +VSWQDLKDF R+VG + CY G++E+ +
Sbjct: 371 IVVKNIDEKVSWQDLKDFGREVGLVNYANVVYNNNGNNKECY----------GIIEYYNY 420
Query: 161 SDMKKALDKLDNAELNGRRIRLI 183
MK+A+D L+ +LNG + +I
Sbjct: 421 QTMKRAIDVLNGKKLNGVSVEVI 443
>gi|221055067|ref|XP_002258672.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193808742|emb|CAQ39444.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 837
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 22/190 (11%)
Query: 4 TKVYIGGLPYGVRERDLE-KFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
K+++G + RE D+ KF+K YG I ++ K F F+E+E A+ A+ E NG+
Sbjct: 309 CKIFVGNISPEAREEDVRRKFLK-YGDIVNMQWKTRFAFIEYEKTSHAEIAIKEENGQLF 367
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSD-------HR 115
GE + V+ + R PP G R P R++ R
Sbjct: 368 FGEELNVQPHHAGNYFNNRNDNR----NYYPPTYG-------RNYSPNRNEIREKKNALR 416
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE--GVVEFESSSDMKKALDKLDNA 173
+++ N+ + SWQDLKDF R +G V YA+ + E G++E+ + ++KKA++ L+
Sbjct: 417 IVIRNVDEKASWQDLKDFGRDIGSVNYANIFQDENKERFGIIEYYNYENVKKAVEVLNGR 476
Query: 174 ELNGRRIRLI 183
+ NG + ++
Sbjct: 477 KFNGITVEVM 486
>gi|210075657|ref|XP_502448.2| YALI0D05547p [Yarrowia lipolytica]
gi|199425767|emb|CAG80636.2| YALI0D05547p [Yarrowia lipolytica CLIB122]
Length = 339
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 20 LEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQ 79
+E +G I++V L +GF+EF+ DA A ++G+ L GE + A I +
Sbjct: 30 IEDLFSSHGPIKEVKLIKNYGFIEFDSLDDAIRAKDNVDGQPLNGEPLFCTYANPIKVRE 89
Query: 80 ERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVG- 138
R R +DR+DR G R+ + L+ VSWQDLKDF R
Sbjct: 90 PRTYRDR-------------NDRNDRGGDRKEDIFRVNISGLAPGVSWQDLKDFGRTADV 136
Query: 139 EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL-IEDKPR 188
+V Y + + EG VEF S+ M++A+ KLD E G + L I+ PR
Sbjct: 137 DVTYTNVSRDREGEGTVEFRSADQMEQAVSKLDGTEFKGEIVTLKIDPNPR 187
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 86/177 (48%), Gaps = 26/177 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVYELN 58
+++YIG LP +R+LE+ + +GRI LK F F+EF D RDA DA+ + +
Sbjct: 7 SRIYIGNLPEDCSQRELEEEFEKFGRIIYCDLKKSYSGSPFAFIEFSDSRDARDAIRDKD 66
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G+++ VE+ R ++ RR P R RYG R + L V
Sbjct: 67 GYEFHGKKLRVELPF---RYRDEPRR-------PSSR---------RYGTTRRGKYVLEV 107
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR GE +AD + G + F S SDM A+++ D +
Sbjct: 108 TGLPPTGSWQDLKDHMRDAGECGHADVFR--GGVGEITFFSRSDMDYAIERFDGSTF 162
>gi|357129728|ref|XP_003566513.1| PREDICTED: uncharacterized protein LOC100839501 [Brachypodium
distachyon]
Length = 292
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 50/74 (67%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
TK+Y+G L R +D+E YGR+R+V LK+ +GFVEF D RDADDA YEL+G+
Sbjct: 39 TKLYVGRLSTRTRTQDVEYLFGRYGRVRNVELKHDYGFVEFSDPRDADDARYELDGRDFD 98
Query: 64 GERVTVEIAKGIDR 77
G R+ VE AKG R
Sbjct: 99 GSRIIVEFAKGTPR 112
>gi|354497469|ref|XP_003510842.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Cricetulus griseus]
Length = 201
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 66/128 (51%), Gaps = 22/128 (17%)
Query: 49 DADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP 108
DA+DA+Y NG R+ VE R YG R GW R R GP
Sbjct: 44 DAEDAIYGRNGYDYGQCRLRVEFP-----------RTYGG------RAGW--PRGARNGP 84
Query: 109 PTR-SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKAL 167
PTR SD R++V L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL
Sbjct: 85 PTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYAL 142
Query: 168 DKLDNAEL 175
KLD+ +
Sbjct: 143 RKLDDTKF 150
>gi|210075933|ref|XP_503927.2| YALI0E14058p [Yarrowia lipolytica]
gi|199426916|emb|CAG79520.2| YALI0E14058p [Yarrowia lipolytica CLIB122]
Length = 417
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 35/211 (16%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-----KNGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ L+ F++ G + DV+L G G VE+ +A++AV L
Sbjct: 90 RVYVGNLAYEVKWHHLKDFMRQAGNVLFADVLLMPNGRSKGCGIVEYSTREEAENAVNTL 149
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPP--------RRG--WGHDRDDRYG 107
+ L+G V V R + PP RG +G R G
Sbjct: 150 TNQELMGRVVYV-------REDRESEPKFSQPNLGPPGARDGGRSERGGDFGGSRQSGGG 202
Query: 108 PPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRH----RNEGVVEFESSSDM 163
P +L V NL WQDLKD R+ G++ AD H + G+V FE++ D
Sbjct: 203 APGT---QLFVGNLPYSTGWQDLKDLFREAGQIVRADIMTSHDGRSKGSGIVLFETAEDA 259
Query: 164 KKALDKLDNAELNGRRIRLIEDK----PRGG 190
+A+++ + ++ GR I + ED+ PRGG
Sbjct: 260 HRAIERFNGHQMGGRAIEVREDRFAGPPRGG 290
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKK 165
++ D R+ V NL+ V W LKDFMRQ G V +AD + R + G+VE+ + + +
Sbjct: 85 SQQDRRVYVGNLAYEVKWHHLKDFMRQAGNVLFADVLLMPNGRSKGCGIVEYSTREEAEN 144
Query: 166 ALDKLDNAELNGRRIRLIEDK 186
A++ L N EL GR + + ED+
Sbjct: 145 AVNTLTNQELMGRVVYVREDR 165
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 16/195 (8%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRI--RDVILKN-----GFGFVEFEDYRDADDAVY 55
GT++++G LPY +DL+ + G+I D++ + G G V FE DA A+
Sbjct: 205 GTQLFVGNLPYSTGWQDLKDLFREAGQIVRADIMTSHDGRSKGSGIVLFETAEDAHRAIE 264
Query: 56 ELNGKSLLGERVTV--EIAKGIDRSQERGRRGYGSYRAPP--PRRGWGHDRDDRYGPPTR 111
NG + G + V + G R R + P P R D G
Sbjct: 265 RFNGHQMGGRAIEVREDRFAGPPRGGPPARVARTPFAPAPQNPPRVPSEFSDGAIGGGDP 324
Query: 112 SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAH----KRHRNEGVVEFESSSDMKKAL 167
SD + V NL + QDL D VG+V A+ + GVV+FE+ + + ++
Sbjct: 325 SD-TIFVGNLPWSTADQDLYDLFETVGKVTKAEIQFLPDGKKAGSGVVQFETPASAEISI 383
Query: 168 DKLDNAELNGRRIRL 182
K R + L
Sbjct: 384 AKFSGYNYGRRDLEL 398
>gi|302675531|ref|XP_003027449.1| hypothetical protein SCHCODRAFT_86032 [Schizophyllum commune H4-8]
gi|300101136|gb|EFI92546.1| hypothetical protein SCHCODRAFT_86032 [Schizophyllum commune H4-8]
Length = 559
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 38/212 (17%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRI--RDVILK-----NGFGFVEFEDYRDADDAVYE 56
+VY+G L Y VR RDL +F++G G + +V++ G G VEF DA +V E
Sbjct: 182 NRVYVGNLSYDVRYRDLMEFMRGAGEVLFAEVLVTPTGVSKGCGIVEFASPEDAQRSVRE 241
Query: 57 LNGKSLLGERVTVEI---------AKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG 107
L+ +SLLG V + A + G G PPPR
Sbjct: 242 LSEQSLLGRPVFIREDRENESRFGATPVPGKMGMAMAGQGMNAGPPPR------------ 289
Query: 108 PPTRSD------HRLIVENLSSRVSWQDLKDFMRQVGEVCYADAH----KRHRNEGVVEF 157
PP + ++L V NL + WQDLKD R G + AD + R + G V F
Sbjct: 290 PPAHNHAAGNPGNQLYVGNLPYQAGWQDLKDLFRTAGSIVRADINIGMDGRPKGSGTVVF 349
Query: 158 ESSSDMKKALDKLDNAELNGRRIRLIEDKPRG 189
E++ D ++A+ + + GR + + ED+ G
Sbjct: 350 ETAKDAQQAIQMYNGFDWYGRVLEVREDRYAG 381
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKR----HRNEGVV 155
H+ + ++ ++R+ V NLS V ++DL +FMR GEV +A+ + G+V
Sbjct: 168 HEEAVEFAKISKRENRVYVGNLSYDVRYRDLMEFMRGAGEVLFAEVLVTPTGVSKGCGIV 227
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
EF S D ++++ +L L GR + + ED+
Sbjct: 228 EFASPEDAQRSVRELSEQSLLGRPVFIREDR 258
>gi|90081130|dbj|BAE90045.1| unnamed protein product [Macaca fascicularis]
Length = 189
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
L+ +DLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I
Sbjct: 32 LTQLSCVKDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI 91
Query: 181 RLIE 184
+LIE
Sbjct: 92 KLIE 95
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 8/98 (8%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+++Y+G L R RDLE YGRIR+V LK + F+E+ D RDADDA Y L+G+ +
Sbjct: 11 SRLYVGRLSSRTRTRDLEYLFSRYGRIREVELKRDYAFIEYSDPRDADDAQYNLDGRDVD 70
Query: 64 GERVTVEIAKGIDR----SQERGRRGYGSYRAPPPRRG 97
G R+ VE AKGI R S+ER G R PPP G
Sbjct: 71 GSRIIVEFAKGIPRGPGGSREREYMG----RGPPPGTG 104
>gi|392561626|gb|EIW54807.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 415
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 33/209 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVILK-----NGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y VR RDL +F++G G + +V++ G G VE+ + DA A+ EL
Sbjct: 20 RVYVGNLSYDVRYRDLMEFMRGAGEVLFAEVLITPTGVSKGCGIVEYANQEDAQRAIREL 79
Query: 58 NGKSLLGERVTVEIAKGIDRSQE-------------RGRRGYGSYRAPPPRRGWGHDRDD 104
+ + LL V + DR E G G APPPR H+
Sbjct: 80 SEQLLLSRPVFIR----EDREHESRFGATPVPGKIGMAMAGQGLNAAPPPRPA-SHNHFG 134
Query: 105 RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAH----KRHRNEGVVEFESS 160
P ++L V NL + WQDLKD R G + AD + R + G V FE++
Sbjct: 135 GLNP----GNQLYVGNLPYQAGWQDLKDLFRSAGNIIRADINIGLDGRPKGSGTVIFETA 190
Query: 161 SDMKKALDKLDNAELNGRRIRLIEDKPRG 189
D ++A+ + + GR + + ED+ G
Sbjct: 191 KDAQQAISMYNGFDWYGRTLEVREDRYAG 219
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKR----HRNEGVV 155
H+ + ++ ++R+ V NLS V ++DL +FMR GEV +A+ + G+V
Sbjct: 5 HEEAVEFAKQSKRENRVYVGNLSYDVRYRDLMEFMRGAGEVLFAEVLITPTGVSKGCGIV 64
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
E+ + D ++A+ +L L R + + ED+
Sbjct: 65 EYANQEDAQRAIRELSEQLLLSRPVFIREDR 95
>gi|409074961|gb|EKM75348.1| hypothetical protein AGABI1DRAFT_46641 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 579
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVILK-----NGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ RDL +F++G G + +V++ G G VEF D+ AV EL
Sbjct: 180 RVYVGNLSYDVKYRDLIEFMRGAGEVLFAEVLVTPTGVSKGCGIVEFASQEDSQRAVREL 239
Query: 58 NGKSLLGERVTV----EIAKGIDRSQERGRRGY-----GSYRAPPPRRGWGHDRDDRYGP 108
+ + LLG V + E + G+ G G + PPPR + +G
Sbjct: 240 SEQPLLGRPVFIREDRETEARFGATPVPGKIGMAMAGQGLHAQPPPRPA----SHNFFGG 295
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYAD----AHKRHRNEGVVEFESSSDMK 164
++L V NL + WQDLKD R G + AD A R + G V FE+ D +
Sbjct: 296 NQNPGNQLYVGNLPYQAGWQDLKDLFRNAGSIIRADINIGADGRPKGSGTVVFETVKDAQ 355
Query: 165 KALDKLDNAELNGRRIRLIEDKPRG 189
+A++ + GR + + ED+ G
Sbjct: 356 QAINIYHGYDWYGRTLEVREDRYAG 380
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKR----HRNEGVV 155
H+ + ++ ++R+ V NLS V ++DL +FMR GEV +A+ + G+V
Sbjct: 165 HEEAVEFAKISKRENRVYVGNLSYDVKYRDLIEFMRGAGEVLFAEVLVTPTGVSKGCGIV 224
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
EF S D ++A+ +L L GR + + ED+
Sbjct: 225 EFASQEDSQRAVRELSEQPLLGRPVFIREDR 255
>gi|296824244|ref|XP_002850623.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
gi|238838177|gb|EEQ27839.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
Length = 363
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 102/244 (41%), Gaps = 80/244 (32%)
Query: 4 TKVYIGGLP-------------------YGVRERDLEKFV--KGYGRIRDVILKNGFGFV 42
T++Y+G LP ++D+E+ G G+I ++ L GFGF+
Sbjct: 7 TRLYLGNLPRNGMLLVLLHPISVTVIVSLSFNKQDIEEHFGSHGTGKITEIKLMQGFGFI 66
Query: 43 EFEDYRDADD-------------------------AVYEL---------------NGKSL 62
E+ED DA D +VY + NG
Sbjct: 67 EYEDAMDAKDVVPGEDTSVVAFTFLDFFFLCFSLFSVYSMDDALLIMGPVLILPSNGTDF 126
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
GER+TV+ A+G R + + PP R P R+ +R+ + L
Sbjct: 127 KGERLTVQFARGPRRRE--------PFPGPPERSTAPR--------PRRTIYRMQITGLP 170
Query: 123 SRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIR 181
SWQDLKDF RQ G +V Y++ R +G VEFE+ +D++ A++KLD + G R+
Sbjct: 171 E-TSWQDLKDFARQSGLDVVYSETRDRD-GKGFVEFENGNDLRTAVEKLDGTDFKGSRVT 228
Query: 182 LIED 185
D
Sbjct: 229 CTAD 232
>gi|148670739|gb|EDL02686.1| mCG7614, isoform CRA_b [Mus musculus]
gi|148670744|gb|EDL02691.1| mCG7614, isoform CRA_b [Mus musculus]
Length = 151
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 128 QDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
+DLKDFMRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I+LIE
Sbjct: 4 KDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE 60
>gi|255644623|gb|ACU22814.1| unknown [Glycine max]
gi|255644635|gb|ACU22820.1| unknown [Glycine max]
gi|255644651|gb|ACU22828.1| unknown [Glycine max]
gi|255648053|gb|ACU24482.1| unknown [Glycine max]
Length = 167
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE+ YGR+R V +KN F FV+F D RDADDA Y L+G+ +
Sbjct: 11 TRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKNDFAFVDFSDPRDADDARYNLDGRDVD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG RG R Y R PPP G
Sbjct: 71 GSRIIVEFAKG----APRGSREYLG-RGPPPGSG 99
>gi|341881506|gb|EGT37441.1| hypothetical protein CAEBREN_07353 [Caenorhabditis brenneri]
Length = 401
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 82/185 (44%), Gaps = 28/185 (15%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNG 59
+VY+G LP V + + +F +G + V K FV + D R+A DAV +N
Sbjct: 6 NRVYVGNLPLDVTKEQVGQFFSNWGEVTYVDFKQTKTGRCAFVGYYDRREAQDAVMMMNS 65
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGY--------GSYRAPPPRRGWGHDRDDRYGPPTR 111
G R+ VE G+ RGR G R PP G G R R
Sbjct: 66 AVFHGRRLRVEFPNGLG---PRGRNGQPMSSMNSNARIRRPP---GQGIQR--------R 111
Query: 112 SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLD 171
+D R+ V + SWQD+KD +R GEV +AD R G+VEFE ++K ++
Sbjct: 112 TDFRVQVRGIPETGSWQDIKDHVRAAGEVVFADI--RGHGIGIVEFEEEGSVRKCIEMFH 169
Query: 172 NAELN 176
N +
Sbjct: 170 NQDFT 174
>gi|444720822|gb|ELW61591.1| Vascular endothelial zinc finger 1 [Tupaia chinensis]
Length = 399
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 82/181 (45%), Gaps = 43/181 (23%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
++Y+G LP +R +D+E YG IRD+ LKN F FVEFED RDA+DAVY +
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 59 GKSLLGERVTVEIAKG----IDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
G G R+ VE + G G R PP R RS++
Sbjct: 76 GYDYDGYRLRVEFPRSGRGAGRGGGGGGGGGAPRGRYGPPSR--------------RSEN 121
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
R++V G+VCYAD ++ GVVEF DM A+ KLDN +
Sbjct: 122 RVVVS------------------GDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTK 161
Query: 175 L 175
Sbjct: 162 F 162
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii yoelii]
Length = 309
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 85/182 (46%), Gaps = 31/182 (17%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
+++Y+G LP V RD+E + +G I +K F F+EFED RDA DA+ E +
Sbjct: 8 SRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKD 67
Query: 59 GKSLLGERVTVEI---AKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
G G ++ VE+ A+ + RGR G R RRG R
Sbjct: 68 GCDFGGNKLRVEVPFNARDNGKYNSRGRGMMG--RGSKSRRG-----------------R 108
Query: 116 LIVE--NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
+VE L SWQDLKD +R+ GE +AD K G V F DM +A++K + +
Sbjct: 109 YVVEVSGLPLSGSWQDLKDHLREAGECGHADVFK--NGTGEVSFFHKEDMLEAIEKFNGS 166
Query: 174 EL 175
Sbjct: 167 TF 168
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 85/178 (47%), Gaps = 29/178 (16%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
+++Y+G LP V RD+E + YG I +K F F+EFED RDA DA+ E +
Sbjct: 8 SRIYVGNLPSHVSSRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKD 67
Query: 59 GKSLLGERVTVEI---AKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
G G ++ VE+ A+ R RG +R P RRG R
Sbjct: 68 GCDFEGNKLRVEVPFNARENGRYNARGGGRGMMHRGPKSRRG-----------------R 110
Query: 116 LIVE--NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLD 171
+VE L SWQDLKD +R+ GE +AD K G V F + DM +A+DK +
Sbjct: 111 YVVEVTGLPISGSWQDLKDHLREAGECGHADVFK--DGTGEVSFFNKDDMLEAIDKFN 166
>gi|9843663|emb|CAC03605.1| splicing factor RSZ33 [Arabidopsis thaliana]
Length = 290
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE+ YGR+RDV +K + FVEF D RDADDA + L+G+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDARHYLDGRDFD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+TVE ++G RG R + S R PPP G
Sbjct: 71 GSRITVEFSRGA----PRGSRDFDS-RGPPPGAG 99
>gi|30687109|ref|NP_850280.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|75331124|sp|Q8VYA5.1|RSZ33_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z33;
AltName: Full=RS-containing zinc finger protein 33;
Short=At-RS2Z33; Short=At-RSZ33
gi|18252179|gb|AAL61922.1| unknown protein [Arabidopsis thaliana]
gi|21386957|gb|AAM47882.1| unknown protein [Arabidopsis thaliana]
gi|51971244|dbj|BAD44314.1| unknown protein [Arabidopsis thaliana]
gi|330254293|gb|AEC09387.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 290
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE+ YGR+RDV +K + FVEF D RDADDA + L+G+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDARHYLDGRDFD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+TVE ++G RG R + S R PPP G
Sbjct: 71 GSRITVEFSRGA----PRGSRDFDS-RGPPPGAG 99
>gi|84996059|ref|XP_952751.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65303748|emb|CAI76125.1| hypothetical protein, conserved [Theileria annulata]
Length = 320
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 96/197 (48%), Gaps = 23/197 (11%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGR-IRDVILKN------GFGFVEFEDYRDADDAVYE 56
+VY+G L + VR +DL+ +K G IR I+++ G G VEF D A A+ E
Sbjct: 10 CRVYVGNLSWKVRWQDLKDHMKQVGEVIRADIIEDYEGKSKGCGIVEFADEESASRAIAE 69
Query: 57 LNGKSLLGERVTV--EIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
LN +L V + +I DR RGYG + PR D G RS
Sbjct: 70 LNDTLILVLMVVLDRQIFVREDRENYNTTRGYGRFLRLRPRM------DSHSGYSARSSG 123
Query: 115 R----LIVENLSSRVSWQDLKDFMRQVGEVCYADA--HKRHRNEGV--VEFESSSDMKKA 166
R +IV NL R SW++LKD + G V AD H+ R++GV V F + +KA
Sbjct: 124 RGGTSVIVTNLQWRTSWKELKDLFKNCGLVIRADVLTHEDGRSKGVGKVVFANEYSARKA 183
Query: 167 LDKLDNAELNGRRIRLI 183
+ ++ L+GR+I +I
Sbjct: 184 ITMYNDYVLDGRKIGII 200
>gi|125550625|gb|EAY96334.1| hypothetical protein OsI_18237 [Oryza sativa Indica Group]
Length = 331
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGRIR+V LK + F+EF D RDA++A Y L+G+ +
Sbjct: 19 TRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKRDYAFIEFSDPRDAEEARYNLDGRDVD 78
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R R G R PPP G
Sbjct: 79 GSRILVEFAKGVPRGPGGSREYMG--RGPPPGTG 110
>gi|115461779|ref|NP_001054489.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|113578040|dbj|BAF16403.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|222630005|gb|EEE62137.1| hypothetical protein OsJ_16924 [Oryza sativa Japonica Group]
Length = 323
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGRIR+V LK + F+EF D RDA++A Y L+G+ +
Sbjct: 11 TRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKRDYAFIEFSDPRDAEEARYNLDGRDVD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R R G R PPP G
Sbjct: 71 GSRILVEFAKGVPRGPGGSREYMG--RGPPPGTG 102
>gi|116791032|gb|ABK25831.1| unknown [Picea sitchensis]
gi|224284468|gb|ACN39968.1| unknown [Picea sitchensis]
Length = 316
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 45/68 (66%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGR+RDV LK+ F F+EF D RDAD+A Y LNG+ L
Sbjct: 11 TRLYVGRLSSRTRTRDLEDLFNRYGRVRDVDLKHDFAFIEFSDPRDADEARYYLNGRDLD 70
Query: 64 GERVTVEI 71
G R+ VE
Sbjct: 71 GSRIVVEF 78
>gi|116788860|gb|ABK25029.1| unknown [Picea sitchensis]
Length = 316
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 45/68 (66%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGR+RDV LK+ F F+EF D RDAD+A Y LNG+ L
Sbjct: 11 TRLYVGRLSSRTRTRDLEDLFNRYGRVRDVDLKHDFAFIEFSDPRDADEARYYLNGRDLD 70
Query: 64 GERVTVEI 71
G R+ VE
Sbjct: 71 GSRIVVEF 78
>gi|366992143|ref|XP_003675837.1| hypothetical protein NCAS_0C04830 [Naumovozyma castellii CBS 4309]
gi|342301702|emb|CCC69473.1| hypothetical protein NCAS_0C04830 [Naumovozyma castellii CBS 4309]
Length = 377
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 32/191 (16%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN------GFGFVEFEDYRDADDAVYELNG 59
++IG L + E DL F G + + + + G G VEF + DA++A+ + NG
Sbjct: 80 IFIGNLSFDATEEDLRDFFSQVGEVVNAEVMSYRGRSKGMGTVEFTNPADAEEAIRQYNG 139
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVE 119
+G + V+ Q++ PPP G ++ + PT+ + V
Sbjct: 140 VPFMGRDIFVK--------QDQ----------PPP----GSRQEFKSSEPTQQGYEAFVV 177
Query: 120 NLSSRVSWQDLKDFMRQVGEVCYADAHKRH----RNEGVVEFESSSDMKKALDKLDNAEL 175
NL ++WQ+LKD R+ G+V AD + R G V + + DM KA+D + AEL
Sbjct: 178 NLPYSITWQNLKDIFRECGDVIRADVELDYNGYSRGFGSVIYANEEDMFKAIDSFNGAEL 237
Query: 176 NGRRIRLIEDK 186
GR + + E K
Sbjct: 238 EGRILEVREGK 248
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 92 PPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK---R 148
PPPRR + DR G ++ + + NLS + +DL+DF QVGEV A+ R
Sbjct: 58 PPPRRTY--DRPYESGVEKHHENGIFIGNLSFDATEEDLRDFFSQVGEVVNAEVMSYRGR 115
Query: 149 HRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKPRGGGRGRSRSS 198
+ G VEF + +D ++A+ + + GR I + +D+P G R +SS
Sbjct: 116 SKGMGTVEFTNPADAEEAIRQYNGVPFMGRDIFVKQDQPPPGSRQEFKSS 165
>gi|242052053|ref|XP_002455172.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|241927147|gb|EES00292.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|448878302|gb|AGE46114.1| arginine/serine-rich splicing factor RS2Z34 transcript I [Sorghum
bicolor]
Length = 296
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G + R RDLE YGR+R V +K+ F FVEF D RDADDA Y L+ +
Sbjct: 24 TRLYVGRVSSRTRTRDLEDLFGRYGRVRYVDMKHEFAFVEFSDPRDADDARYHLDDREFD 83
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G R+ VE AKGI R R G + PPP
Sbjct: 84 GSRLIVEFAKGIPRGPGGSREYMG--KGPPP 112
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAE 174
RL V +SSR +DL+D + G V Y D VEF D A LD+ E
Sbjct: 25 RLYVGRVSSRTRTRDLEDLFGRYGRVRYVDMKHEF---AFVEFSDPRDADDARYHLDDRE 81
Query: 175 LNGRR--IRLIEDKPRGGG 191
+G R + + PRG G
Sbjct: 82 FDGSRLIVEFAKGIPRGPG 100
>gi|353243308|emb|CCA74865.1| related to heterogeneous nuclear ribonucleoprotein [Piriformospora
indica DSM 11827]
Length = 475
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVILK-----NGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ DL +F++G G + +V++ G G VEF +A A+ EL
Sbjct: 117 RVYVGNLAYDVKYGDLIEFMRGAGEVLFAEVLVTPSGQSKGCGIVEFATAEEAQRAIKEL 176
Query: 58 NGKSLLGERVTV----EIAKGIDRSQERGRRGY---GSYRAPPPRRGWGHDRDDRYGPPT 110
+ LG V + E + G+ G G+ PPPR G++ G
Sbjct: 177 SETVFLGRPVYLREDREAESRFGATPVPGKIGAAMAGNGNVPPPR---GYN-----GGAA 228
Query: 111 RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAH----KRHRNEGVVEFESSSDMKKA 166
++L V NL + WQDLKD R G + AD + R + G V FE++ D + A
Sbjct: 229 NPGNQLYVGNLPYQAGWQDLKDLFRNAGNIVRADINIGIDGRAKGSGTVVFETAKDAQSA 288
Query: 167 LDKLDNAELNGRRIRLIEDK------------PRGGGRGRS 195
+ E GR + + ED+ PRG GRG S
Sbjct: 289 ISMYHGYEWYGRTLEVREDRYAGLHGSRGRGAPRGLGRGFS 329
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKKALD 168
++R+ V NL+ V + DL +FMR GEV +A+ + + G+VEF ++ + ++A+
Sbjct: 115 ENRVYVGNLAYDVKYGDLIEFMRGAGEVLFAEVLVTPSGQSKGCGIVEFATAEEAQRAIK 174
Query: 169 KLDNAELNGRRIRLIEDK 186
+L GR + L ED+
Sbjct: 175 ELSETVFLGRPVYLREDR 192
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 86/231 (37%), Gaps = 59/231 (25%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-----KNGFGFVEFEDYRDADDAVY 55
G ++Y+G LPY +DL+ + G I D+ + G G V FE +DA A+
Sbjct: 231 GNQLYVGNLPYQAGWQDLKDLFRNAGNIVRADINIGIDGRAKGSGTVVFETAKDAQSAIS 290
Query: 56 ELNGKSLLGERVTV--EIAKGIDRSQERGR-----RGYGS-------------------- 88
+G G + V + G+ S+ RG RG+ S
Sbjct: 291 MYHGYEWYGRTLEVREDRYAGLHGSRGRGAPRGLGRGFSSRGAPGGGYGRGGGGGFGRGG 350
Query: 89 --------------YRAPPPRRGWGHDRDDRYG--PPTRSDHRLIVENLSSRVSWQDLKD 132
Y P RG +R Y PP++ +++V NL + +DL +
Sbjct: 351 PGGGGRSSGDLYQDYSGPSGDRG---ERGGGYANLPPSQ---QIMVRNLPWSTANEDLVE 404
Query: 133 FMRQVGEVCYADAH---KRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
G V A+ R + GVV+F + + A+ K GR +
Sbjct: 405 LFETTGHVELAEILYDGTRSKGSGVVQFTHVEEAETAIAKFSGYTYGGRPL 455
>gi|344295340|ref|XP_003419370.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Loxodonta africana]
Length = 174
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 22/138 (15%)
Query: 39 FGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGW 98
F FV FE RDA+DA+Y NG R+ VE + R G
Sbjct: 7 FAFVRFETPRDAEDAIYGRNGYDYGQCRLRVEFPRAYGGRGGWPRGGRNG---------- 56
Query: 99 GHDRDDRYGPPTR-SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEF 157
PPTR SD R++V L SWQDLKD MR+ G+VCYAD K G+VE+
Sbjct: 57 ---------PPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEY 105
Query: 158 ESSSDMKKALDKLDNAEL 175
DM+ AL KLD+ +
Sbjct: 106 LRKEDMEYALRKLDDTKF 123
>gi|393243611|gb|EJD51125.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 526
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 98/236 (41%), Gaps = 52/236 (22%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRI---RDVILKNGF----GFVEFEDYRDADDAVYE 56
+VY+G L Y V+ RDL +F++G G + ++ NG G VEF Y DA A+ +
Sbjct: 149 CRVYVGNLSYDVKYRDLMEFMRGAGEVLFAEVLVTPNGISKGCGIVEFGSYDDAQRAIRD 208
Query: 57 LNGKSLLGERVTVEI---------AKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG 107
L+ LLG V + A + G G PPPR
Sbjct: 209 LSEVPLLGRPVFIREDREGEARFGATPVPGKIGAAMAGQGYTTQPPPR------------ 256
Query: 108 PPTRSDH---------------RLIVENLSSRVSWQDLKDFMRQVGEVCYADAH----KR 148
PP+ + + +L V NL + WQDLKD RQ G + AD + R
Sbjct: 257 PPSHNVYGGGGNNGGGGGNPGNQLYVGNLPYQAGWQDLKDLFRQAGSIVRADINIGLDGR 316
Query: 149 HRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKPRG-----GGRGRSRSSS 199
+ G V +ES D A+ + E GR++ + D+ G G RG R S+
Sbjct: 317 AKGSGTVVYESVKDADNAISMYNGYEWFGRKLEVRLDRYAGSAPPRGARGGFRGSA 372
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKKALD 168
+ R+ V NLS V ++DL +FMR GEV +A+ + + G+VEF S D ++A+
Sbjct: 148 ECRVYVGNLSYDVKYRDLMEFMRGAGEVLFAEVLVTPNGISKGCGIVEFGSYDDAQRAIR 207
Query: 169 KLDNAELNGRRIRLIEDK 186
L L GR + + ED+
Sbjct: 208 DLSEVPLLGRPVFIREDR 225
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 58/228 (25%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGF-------GFVEFEDYRDADDAVYEL 57
++Y+G LPY +DL+ + G I + G G V +E +DAD+A+
Sbjct: 279 QLYVGNLPYQAGWQDLKDLFRQAGSIVRADINIGLDGRAKGSGTVVYESVKDADNAISMY 338
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRG-------------------YGSYRA------- 91
NG G ++ V + + + RG RG Y Y A
Sbjct: 339 NGYEWFGRKLEVRLDRYAGSAPPRGARGGFRGSARPPRGGGGGGRSSYTDYDAGGGDTAM 398
Query: 92 ----------PPPRRGW----GHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQV 137
P RG+ G+D PP++ +++V NL + +DL +
Sbjct: 399 VDGGQSYAGVPTGPRGFSAYAGYDV-----PPSQ---QIMVGNLPWSTANEDLVELFETT 450
Query: 138 GEVCYADA---HKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
G V A+ +R + GVV+F ++ + A+ K GR + +
Sbjct: 451 GTVQEAEVLFEGQRSKGAGVVQFADVAEAETAIAKFQGYVYGGRPLEV 498
>gi|403221560|dbj|BAM39693.1| uncharacterized protein TOT_010001366 [Theileria orientalis strain
Shintoku]
Length = 458
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 27/182 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
TKV+IG L V + +L +G I + + F FV+F +DA+ A+ E++ K +
Sbjct: 246 TKVFIGNLSGEVTQDELTAKFSSFGPINRIDFRRKFAFVDFVRSKDAETAIREMHNKLIW 305
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
G + V+ I++ ++ R P+ G+ ++ V NL
Sbjct: 306 GSWLKVQ--PHIEQQKKLSARE--------PKPGY----------------QITVTNLDQ 339
Query: 124 RVSWQDLKDFMRQVGEVCYAD-AHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
VSWQDLKDF RQ GEV YA K ++ G++EF + ++ AL L+ +++ ++ L
Sbjct: 340 SVSWQDLKDFARQAGEVNYASIIIKGNKRFGLIEFTNDESVQNALKDLNGKKIDVNKLEL 399
Query: 183 IE 184
I
Sbjct: 400 IH 401
>gi|29841408|gb|AAP06440.1| similar to NM_006276 splicing factor, arginine/serine-rich 7
[Schistosoma japonicum]
gi|226472076|emb|CAX77076.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472078|emb|CAX77077.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472080|emb|CAX77078.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472082|emb|CAX77079.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472084|emb|CAX77080.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 169
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
VGTKVYIG LP ER+LE+ + YGR+R+V + +N GF FVEFED DA DAV EL+
Sbjct: 8 VGTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELD 67
Query: 59 GKSLLGERVTVEIAKGIDRSQ 79
G + G R VE++ G R +
Sbjct: 68 GTVMCGVRARVELSTGKSRQK 88
>gi|256089259|ref|XP_002580730.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646106|emb|CCD59208.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 171
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
VGTKVYIG LP ER+LE+ + YGR+R+V + +N GF FVEFED DA DAV EL+
Sbjct: 8 VGTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELD 67
Query: 59 GKSLLGERVTVEIAKGIDRSQ 79
G + G R VE++ G R +
Sbjct: 68 GTVMCGVRARVELSTGKSRQK 88
>gi|365991834|ref|XP_003672745.1| hypothetical protein NDAI_0L00170 [Naumovozyma dairenensis CBS 421]
gi|410729717|ref|XP_003671037.2| hypothetical protein NDAI_0G00180 [Naumovozyma dairenensis CBS 421]
gi|401779856|emb|CCD25794.2| hypothetical protein NDAI_0G00180 [Naumovozyma dairenensis CBS 421]
Length = 464
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRI--RDVILKNG----FGFVEFEDYRDADDAVYELNG 59
+++G L Y DL ++ G G + D+I G G VEF + +D +DA+ + +G
Sbjct: 112 IFVGNLTYDCTPEDLREYFSGIGEVVRADIITSKGHHRGMGTVEFTNSKDVEDAIRQYDG 171
Query: 60 KSLLGERVTV---EIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRL 116
L ++ V RS R S R + +DR P R +++
Sbjct: 172 SYFLDRQIFVRQDNPPPDGGRSSRRSDESISSSRGYQDKSSSSYDRAPSTRQPNRQGYKV 231
Query: 117 IVENLSSRVSWQDLKDFMRQVGEVCYADAHK----RHRNEGVVEFESSSDMKKALDKLDN 172
+ NL ++WQ LKD ++ G+V AD R R G V S M+KA+ L+
Sbjct: 232 FIANLPFSINWQALKDMFKEFGDVLRADIELDSRGRSRGFGTVILREKSAMEKAIATLNG 291
Query: 173 AELNGRRIRLIE 184
E+ GRRI + E
Sbjct: 292 TEMEGRRIDVKE 303
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYAD---AHKRHRNEGVVEFESSSDMKKALDKLDN 172
+ V NL+ + +DL+++ +GEV AD + HR G VEF +S D++ A+ + D
Sbjct: 112 IFVGNLTYDCTPEDLREYFSGIGEVVRADIITSKGHHRGMGTVEFTNSKDVEDAIRQYDG 171
Query: 173 AELNGRRIRLIEDK-PRGGGRGRSRSSSSRSRSKS-RSRSRSSKSRSPRSR 221
+ R+I + +D P GGR RS S S S+ + +S SS R+P +R
Sbjct: 172 SYFLDRQIFVRQDNPPPDGGRSSRRSDESISSSRGYQDKSSSSYDRAPSTR 222
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 89/233 (38%), Gaps = 55/233 (23%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRI--RDVILKN-----GFGFVEFEDYRDADDAVY 55
G KV+I LP+ + + L+ K +G + D+ L + GFG V + + A+
Sbjct: 228 GYKVFIANLPFSINWQALKDMFKEFGDVLRADIELDSRGRSRGFGTVILREKSAMEKAIA 287
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGS-YR-----APPPRRG-WGHDRDDR--- 105
LNG + G R +++ +G Q+ YG+ YR AP + D D++
Sbjct: 288 TLNGTEMEGRR--IDVKEGYSNRQDPSDYKYGNDYRNDINTAPNHDQSRMDVDEDNQMPN 345
Query: 106 ------------------YGPPTRS--------------DHRLIVENLSSRVSWQDLKDF 133
Y PP +H + NL + + DL D
Sbjct: 346 IETEQNPVGARAIPTQPSYAPPILKNSTFTENVTGSGERNHLIYCNNLPASTARSDLYDL 405
Query: 134 MRQVGEVCYADAHKRHR----NEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
+G + A+ + +E VVE+ + D +++L+ G +++
Sbjct: 406 FESIGRISNAELKYNDKGEPTSEAVVEYINLEDADVCIERLNGYNYGGCELQI 458
>gi|296213104|ref|XP_002753142.1| PREDICTED: serine/arginine-rich splicing factor 9, partial
[Callithrix jacchus]
Length = 167
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 66/136 (48%), Gaps = 20/136 (14%)
Query: 40 GFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG 99
FV FED RDA+DA+Y NG R+ VE R+ R PP R
Sbjct: 1 AFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFP----RTYGGRGGWPRGGRNGPPTR--- 53
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFES 159
RSD R++V L SWQDLKD MR+ G+VCYAD K G+VE+
Sbjct: 54 -----------RSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK--DGVGMVEYLR 100
Query: 160 SSDMKKALDKLDNAEL 175
DM+ AL KLD+ +
Sbjct: 101 KEDMEYALRKLDDTKF 116
>gi|226472060|emb|CAX77068.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472062|emb|CAX77069.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472064|emb|CAX77070.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472066|emb|CAX77071.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472072|emb|CAX77074.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 155
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
VGTKVYIG LP ER+LE+ + YGR+R+V + +N GF FVEFED DA DAV EL+
Sbjct: 8 VGTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELD 67
Query: 59 GKSLLGERVTVEIAKGIDRSQ 79
G + G R VE++ G R +
Sbjct: 68 GTVMCGVRARVELSTGKSRQK 88
>gi|149390510|gb|ABR25316.1| splicing factor [Oryza sativa Indica Group]
Length = 209
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE YGR+R V +K+ F FVEF D RDAD+A Y L+G+
Sbjct: 18 TRLYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHEFAFVEFSDARDADEARYNLDGRDFD 77
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G R+ VE AKG+ R R G R PPP
Sbjct: 78 GSRMIVEFAKGVPRGPGGSREYMG--RGPPP 106
>gi|256089261|ref|XP_002580731.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646105|emb|CCD59207.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 157
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
VGTKVYIG LP ER+LE+ + YGR+R+V + +N GF FVEFED DA DAV EL+
Sbjct: 8 VGTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELD 67
Query: 59 GKSLLGERVTVEIAKGIDRSQ 79
G + G R VE++ G R +
Sbjct: 68 GTVMCGVRARVELSTGKSRQK 88
>gi|302831616|ref|XP_002947373.1| hypothetical protein VOLCADRAFT_120471 [Volvox carteri f.
nagariensis]
gi|300267237|gb|EFJ51421.1| hypothetical protein VOLCADRAFT_120471 [Volvox carteri f.
nagariensis]
Length = 582
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVIL--------KNGFGFVEFEDYRDADDAVY 55
K+Y+GGL + + D+ + G++ +V L G+ FV F D + A+
Sbjct: 76 NKIYVGGLEFSATKEDIAEVFSRAGKVLNVQLVMDHETQRSKGYAFVTFADDDAYEYAIK 135
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRR-----GYGSYRAPPPRRGWGHDRD--DRYGP 108
+NG ++ G+ V V A D +RG G+G Y P R + +DR D+
Sbjct: 136 RMNGVTVRGKEVKVNKALNPDEKADRGPPRDRDPGHGRYIPP---RPYSNDRPHFDKPPG 192
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALD 168
P R+ + L + +W++LKDF+R A+ GV E+ SS + +KA++
Sbjct: 193 PKSKGFRVTISGLPTHYTWRELKDFLRNTTAAQPTYANVERPGYGVGEWTSSEERRKAIE 252
Query: 169 KLDNAELNGRRIRLIEDKPRGG 190
+LD L G +R + +P G
Sbjct: 253 RLDGMRLEGGELRCVPLRPGSG 274
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 31/177 (17%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVYELN 58
++Y+G LP +R++E+ + +G+I LK F FVEF DYRDA DA+ +
Sbjct: 7 VRLYVGNLPDDCTQREVEEEFEKFGKIVYCELKRTVSGLPFAFVEFSDYRDARDAIKNKD 66
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G+R+ VE+ R S R+ PPR+G + + V
Sbjct: 67 GAEFNGKRLRVEVPFSSKRQ---------SRRSDPPRKG---------------KYLVEV 102
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD +R GE +A+ + E V F S DM+ A+DK D +
Sbjct: 103 TGLPPTGSWQDLKDHLRAAGECGHANVFRGGVGE--VSFFSRGDMEYAIDKFDGSTF 157
>gi|402222407|gb|EJU02474.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 554
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRI--RDVILK-----NGFGFVEFEDYRDADDAVYE 56
++Y+G L Y RDL +F++G G + +V++ G G VE+ + DA A+ E
Sbjct: 140 NRLYVGNLSYDCTYRDLLEFMRGAGEVLFAEVLVTPTGVSKGCGIVEYANSDDAQKAIRE 199
Query: 57 LNGKSLLGERVTV----EIAKGIDRSQERGRRGYG------SYRAPPPRRGW-------G 99
L + LLG + + E A + G+ G + PPPR W G
Sbjct: 200 LGDQPLLGRPIFIREDREEASRFGATPVPGKVGMAMAGMGMNATVPPPRPSWHGGGYPGG 259
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYAD----AHKRHRNEGVV 155
G ++L V NL + WQDLKD RQ G + AD A R + GVV
Sbjct: 260 AGGAGGGGGAGGPGNQLYVGNLPYQAGWQDLKDLFRQAGNIIRADINFGADGRPKGSGVV 319
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
+E+++D + A+ + GR++ + ED+
Sbjct: 320 IYETAADAQAAISMFSGYDWYGRQLEVREDR 350
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKR----HRNEGVV 155
H+ +G ++ ++RL V NLS +++DL +FMR GEV +A+ + G+V
Sbjct: 126 HEEAVAFGQISKRENRLYVGNLSYDCTYRDLLEFMRGAGEVLFAEVLVTPTGVSKGCGIV 185
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
E+ +S D +KA+ +L + L GR I + ED+
Sbjct: 186 EYANSDDAQKAIRELGDQPLLGRPIFIREDR 216
>gi|260819022|ref|XP_002604681.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
gi|229290009|gb|EEN60692.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
Length = 148
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 11/104 (10%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
+ K+Y+G LP G + ++E+ +GR+R+V + +N GF +VEFED+RDA DAV LN
Sbjct: 10 LNCKIYVGNLPPGAAKHEIEERFSDFGRLRNVWVARNPPGFAYVEFEDHRDARDAVKSLN 69
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDR 102
GK + G R VE + G+ R RG PPP HDR
Sbjct: 70 GKMICGVRSRVEFSHGMRRPSRRG--------LPPPAPSRSHDR 105
>gi|430811456|emb|CCJ31097.1| unnamed protein product [Pneumocystis jirovecii]
Length = 124
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAV----YELNG 59
T+VY+G LP + RD+EKF GYG I ++ L +GF FVEF+D RDA DAV ++G
Sbjct: 8 TRVYLGNLPRNIERRDIEKFFYGYGEIAEIKLMSGFAFVEFKDARDAKDAVQGSEVSIDG 67
Query: 60 KSLLGERVTVEIAKG 74
K +LG+R+ +E A+G
Sbjct: 68 KKMLGDRINIEFARG 82
>gi|68035567|gb|AAY84873.1| alternative splicing regulator [Triticum aestivum]
Length = 333
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++Y+G L R RDLE YGRIR+V LK + F+E+ D RDAD+A Y L+G+ +
Sbjct: 11 ARLYVGRLSSRTRSRDLEYLFSKYGRIREVELKRDYAFIEYSDPRDADEARYNLDGRDVD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+ VE AKG+ R R R PPP G
Sbjct: 71 GSRIIVEFAKGVPRGSGGSREREYVGRGPPPGTG 104
>gi|242063870|ref|XP_002453224.1| hypothetical protein SORBIDRAFT_04g001910 [Sorghum bicolor]
gi|241933055|gb|EES06200.1| hypothetical protein SORBIDRAFT_04g001910 [Sorghum bicolor]
gi|448878270|gb|AGE46098.1| arginine/serine-rich splicing factor RS34 [Sorghum bicolor]
Length = 295
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 111/236 (47%), Gaps = 30/236 (12%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL--L 63
V+ G L Y VR ++E+ YGR+ V LK GF FV ED RDA+DA++ L+G
Sbjct: 4 VFCGNLDYDVRISEVERLFGKYGRVERVDLKTGFAFVYMEDERDAEDAIHRLDGIDFGRK 63
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
G R+ VE K DR+ GRRG S R+P R PT++ + + +++
Sbjct: 64 GRRIRVEWTK-EDRTA--GRRG-SSRRSPTQAR------------PTKTLFVINFDPINT 107
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL- 182
R+ +DL+ + G V K N V+FE D +AL+ + + R I +
Sbjct: 108 RI--RDLERHFDKYGRVANVRIKK---NFAFVQFEVQEDATRALEGTNGSHFMDRVISVE 162
Query: 183 --IEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKS-GSPRKSKSKAK 235
+ D G RG S R R +S R RS SP R + GSP +SK +
Sbjct: 163 YALRDDDEKGERGNGYSPDRRGRERSPGRRRSP---SPYGRGRERGSPDYGRSKER 215
>gi|51971529|dbj|BAD44429.1| unknown protein [Arabidopsis thaliana]
Length = 290
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++Y+G L R RDLE+ YGR+RDV +K + FV F D RDADDA + L+G+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVVFGDPRDADDARHYLDGRDFD 70
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
G R+TVE ++G RG R + S R PPP G
Sbjct: 71 GSRITVEFSRGA----PRGSRDFDS-RGPPPGAG 99
>gi|351714492|gb|EHB17411.1| Splicing factor, arginine/serine-rich 6 [Heterocephalus glaber]
Length = 101
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
+Y G L Y VRE+D+++F GY R+ V LKNG+GFVEF+D DAD+A K L E
Sbjct: 4 IYTGRLSYNVREKDIQRFFSGYSRLLKVDLKNGYGFVEFKDSCDADEAPLRAKRKELCSE 63
Query: 66 RVTVEIAKGIDRSQERGRRGYGS 88
RV VE A+G R +R R YGS
Sbjct: 64 RVMVEHARGPGR--DRDRYSYGS 84
>gi|409048188|gb|EKM57666.1| hypothetical protein PHACADRAFT_251433 [Phanerochaete carnosa
HHB-10118-sp]
Length = 542
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRI--RDVILK-----NGFGFVEFEDYRDADDAVYE 56
+VY+G L Y V+ RDL +F++G G + +V++ G G VEF DA A+ E
Sbjct: 154 NRVYVGNLSYDVKYRDLMEFMRGAGEVLFAEVLITPTGVSKGCGIVEFTSQEDAQRAIRE 213
Query: 57 LNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWG--------HDRDD 104
L+ + LLG V + R +G+ P G G +
Sbjct: 214 LSEQPLLGRPVFI-------REDRENESRFGATPVPGKIGMAMAGQGLHAAPPPRPPHHN 266
Query: 105 RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYAD----AHKRHRNEGVVEFESS 160
+ T ++L V NL + WQDLKD R G + AD A R + G V FE++
Sbjct: 267 YFAAGTNPGNQLYVGNLPYQAGWQDLKDLFRSAGNIIRADINIGADGRPKGSGTVIFETA 326
Query: 161 SDMKKALDKLDNAELNGRRIRLIEDKPRG-GGRGRSRSS 198
D ++A+ + E GR + + ED+ G G G R S
Sbjct: 327 KDAQQAIGMYNGFEWYGRTLEVREDRYAGLSGPGAYRGS 365
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKR----HRNEGVV 155
H+ + ++ ++R+ V NLS V ++DL +FMR GEV +A+ + G+V
Sbjct: 140 HEEAVEFAKVSKRENRVYVGNLSYDVKYRDLMEFMRGAGEVLFAEVLITPTGVSKGCGIV 199
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
EF S D ++A+ +L L GR + + ED+
Sbjct: 200 EFTSQEDAQRAIRELSEQPLLGRPVFIREDR 230
>gi|56758208|gb|AAW27244.1| SJCHGC09413 protein [Schistosoma japonicum]
Length = 214
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
VGTKVYIG LP ER+LE+ + YGR+R+V + +N GF FVEFED DA DAV EL+
Sbjct: 8 VGTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELD 67
Query: 59 GKSLLGERVTVEIAKG 74
G + G R VE++ G
Sbjct: 68 GTVMCGVRARVELSTG 83
>gi|171849000|pdb|3BEG|B Chain B, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 115
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 54/90 (60%), Gaps = 8/90 (8%)
Query: 105 RYGPPTR-SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
RYGPP+R S++R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM
Sbjct: 7 RYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDM 64
Query: 164 KKALDKLDNAELNGRR-----IRLIEDKPR 188
A+ KLDN + IR+ D PR
Sbjct: 65 TYAVRKLDNTKFRSHEGETAYIRVKVDGPR 94
>gi|355734188|gb|AES11270.1| hypothetical protein [Mustela putorius furo]
Length = 67
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Query: 29 RIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGI--DRSQERGRRGY 86
+I +V LKNG+GFVEF+D RDADDAVYELNGK L GERV VE A+G D S GR GY
Sbjct: 1 KILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGY 60
Query: 87 G 87
G
Sbjct: 61 G 61
>gi|255564609|ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537387|gb|EEF39015.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 259
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 115/255 (45%), Gaps = 33/255 (12%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
+++G + R+ +LE+ YGR+ V +K+GF FV FED RDA DA+ L+ S +
Sbjct: 5 IFVGNFEFETRQSELERLFSKYGRVERVDMKSGFAFVYFEDERDAADAIRGLDNISFGYD 64
Query: 66 R--VTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R ++VE A+G ERGR GS R + R PT++ + + + +
Sbjct: 65 RRKLSVEWARG-----ERGRHRDGS-------RSMANQR------PTKTLFVINFDPIHT 106
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI--- 180
RV +D+K + GEV + + RN V+FE+ D KAL+ ++ R +
Sbjct: 107 RV--EDIKRHFERYGEVLHV---RIRRNFAFVQFETQEDATKALECTHMTKILDRVVSVE 161
Query: 181 -RLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRS----KSGSPRKSKSKAK 235
L +D RG R S RS S R R+RS K P + ++
Sbjct: 162 YALRDDSERGDKSDSPRRGSHYGRSPSPVYRRRPSPDYGRARSPVYDKYNGPSYDRRRSP 221
Query: 236 SVSRSPSPSKTRKRS 250
R SP R RS
Sbjct: 222 EYGRDQSPEYGRYRS 236
>gi|384493187|gb|EIE83678.1| hypothetical protein RO3G_08383 [Rhizopus delemar RA 99-880]
Length = 163
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
++Y+G + VRE+D+ YGRIRD+IL+N + FVEF+D RDADDA EL+G L
Sbjct: 24 CRLYVGNVNRYVREKDIRDLFSRYGRIRDLILRNFYAFVEFDDVRDADDACKELDGYKLE 83
Query: 64 GERVTVEIAK 73
G+R+ V +A
Sbjct: 84 GDRIIVHVAN 93
>gi|198436398|ref|XP_002124933.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1,
partial [Ciona intestinalis]
Length = 166
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 70/128 (54%), Gaps = 19/128 (14%)
Query: 49 DADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP 108
DADDAV NG + G ++ VE + R G+ R RG R GP
Sbjct: 1 DADDAVRARNGYNFDGYKLKVE--------RPRSSSGFQG-RPSNYIRG-------RPGP 44
Query: 109 PT-RSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKAL 167
P+ R+++R+IVE L SWQDLKD MR+ G+VCYAD ++ GVVEF + DMK AL
Sbjct: 45 PSKRTEYRVIVEGLPGSGSWQDLKDHMREAGDVCYADVYR--DGSGVVEFVNKEDMKFAL 102
Query: 168 DKLDNAEL 175
+D+ +
Sbjct: 103 KHMDDTKF 110
>gi|403221223|dbj|BAM39356.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 334
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-------FGFVEFEDYRDADDAVYELN 58
V++G LP V RD+ +G I+D+ +K+G + F++F R A+DAV +
Sbjct: 15 VFVGNLPEKVDNRDIHDLFDKFGEIKDIDIKHGKTTNYTSYAFIDFASVRSAEDAVDSRD 74
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G ++ VE A G G PR+ HD D R R+D+RL++
Sbjct: 75 GYEYDRYKLRVEFA------------GEGK-----PRK---HDDDRRDRDRHRTDYRLVI 114
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELN 176
NL WQ LKD MR+ G V Y + +G V+F SDMK AL K+D +EL+
Sbjct: 115 SNLPHGCRWQHLKDHMRKAGPVGYVNI---SHGKGYVDFIHKSDMKYALRKMDGSELS 169
>gi|315055555|ref|XP_003177152.1| hypothetical protein MGYG_01236 [Arthroderma gypseum CBS 118893]
gi|311338998|gb|EFQ98200.1| hypothetical protein MGYG_01236 [Arthroderma gypseum CBS 118893]
Length = 371
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 101/252 (40%), Gaps = 88/252 (34%)
Query: 4 TKVYIGGLP-----------------YGVRERDLEKFV--KGYGRIRDVILKNGFGFVEF 44
T++Y+G LP ++D+E+ G G+I ++ L GFGF+E+
Sbjct: 7 TRLYLGNLPRNGTLLVLLHPISVTVSPSFNKQDIEEHFGSHGTGKITEIKLMQGFGFIEY 66
Query: 45 EDYRDADDAV------------------------------YELNGKSLL----------- 63
ED DA D V Y N L+
Sbjct: 67 EDAMDAKDVVPGEGTSVVAFTFLDPFIFFPCLFFCLLFIFYPWNDALLILDPSSARFLLQ 126
Query: 64 ---------GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
GER+TV+ A+G R + + PP R P R+ +
Sbjct: 127 LSVHGTDFKGERLTVQFARGPRRRE--------PFPGPPERSAAPR--------PRRTIY 170
Query: 115 RLIVENLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
R+ + L SWQDLKDF RQ G +V Y++ R +G VEFE+ +D++ A++KLD
Sbjct: 171 RMQITGLPE-TSWQDLKDFARQSGLDVVYSETRDRD-GKGFVEFENGNDLRTAVEKLDGT 228
Query: 174 ELNGRRIRLIED 185
+ G R+ D
Sbjct: 229 DFKGSRVTCTAD 240
>gi|156095500|ref|XP_001613785.1| splicing factor, arginine/serine-rich 1 [Plasmodium vivax Sal-1]
gi|148802659|gb|EDL44058.1| splicing factor, arginine/serine-rich 1, putative [Plasmodium
vivax]
Length = 314
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
+++Y+G LP V RD+E + YG I +K F F+EFED RDA DA+ E +
Sbjct: 8 SRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKD 67
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G ++ VE+ R G Y + R G R G R +V
Sbjct: 68 GCDFGGNKLRVEVPFNA--------RDNGKYSSRGGRGMMGRGMKSRRG-------RYVV 112
Query: 119 E--NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
E L SWQDLKD +R+ GE +AD K G V F DM +A++K + +
Sbjct: 113 EVSGLPLSGSWQDLKDHLREAGECGHADVFK--NGLGEVSFFHKEDMLEAIEKFNGSTF 169
>gi|67624493|ref|XP_668529.1| ENSANGP00000021579 [Cryptosporidium hominis TU502]
gi|54659743|gb|EAL38308.1| ENSANGP00000021579 [Cryptosporidium hominis]
Length = 329
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 17/145 (11%)
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCY-ADAHKRHRNEGVVEFESSSDMKKAL 167
P R R+ V NL SW+DLKD+ RQ+GEV Y A H + + GVVE+ + +MK+AL
Sbjct: 26 PPRKHFRVCVFNLDDNASWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKRAL 85
Query: 168 DKLDNAELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSP 227
+++ N G+ IR+ ED R + + +K RSP S P
Sbjct: 86 EEIPNLPFLGKSIRVEED------------IGQLDRELAAANGYGAKRRSPPPFSS--GP 131
Query: 228 RKSKSKAKSVSRSPSPSKTRKRSRS 252
+ +A+ R PSPS+ R RSRS
Sbjct: 132 YNTGGRAR--GRYPSPSRFRMRSRS 154
>gi|413944557|gb|AFW77206.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 330
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
TK+Y+G + R +DLE + YGR+R+V +K FGFVEF D RDADDA ++L+G+
Sbjct: 90 TKLYVGQISPYTRTQDLEDIFRKYGRLRNVDMKREFGFVEFTDPRDADDARHDLDGRIFD 149
Query: 64 GERVTVEIAKGIDR 77
G + VE A+G R
Sbjct: 150 GSHLIVEFARGAQR 163
>gi|149053808|gb|EDM05625.1| rCG34610, isoform CRA_d [Rattus norvegicus]
Length = 181
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 105 RYGPPTR-SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
RYGPP+R S++R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM
Sbjct: 44 RYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDM 101
Query: 164 KKALDKLDNAEL 175
A+ KLDN +
Sbjct: 102 TYAVRKLDNTKF 113
>gi|389584162|dbj|GAB66895.1| splicing factor arginine/serine-rich 1 [Plasmodium cynomolgi strain
B]
Length = 316
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
+++Y+G LP V RD+E + YG I +K F F+EFED RDA DA+ E +
Sbjct: 8 SRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKD 67
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G ++ VE+ R G Y + R G R G R +V
Sbjct: 68 GCDFGGNKLRVEVPFNA--------RDNGKYNSRGGRGMMGRGMKSRRG-------RYVV 112
Query: 119 E--NLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
E L SWQDLKD +R+ GE +AD K G V F DM +A++K + +
Sbjct: 113 EVSGLPLSGSWQDLKDHLREAGECGHADVFK--NGLGEVSFFHKEDMLEAIEKFNGSTF 169
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
TKVY+G LP +E++LE+ YG ++ V + +N GF FVEFED RDADD+V L+G
Sbjct: 30 TKVYVGDLPRDAQEKELERAFSYYGPLKSVWVARNPPGFAFVEFEDPRDADDSVRGLDGS 89
Query: 61 SLLGERVTVEIAKG 74
SL G RV VE++ G
Sbjct: 90 SLCGTRVRVELSTG 103
>gi|340931863|gb|EGS19396.1| hypothetical protein CTHT_0048550 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 614
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-KNG------FGFVEFEDYRDADDAVY 55
+VY+G L Y V+ L+ F++ G + DV+L NG + VE+ A A+
Sbjct: 246 RVYVGNLSYDVKWHHLKDFMRQAGEVLYADVLLLPNGMSKVGAYNIVEYATREQAQHAIA 305
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
L+ ++L+G + V DR E G G G + P + +
Sbjct: 306 TLSNQNLMGRLIYVRE----DRESEPRFGPPGGIPRGGYSGGMGGGAYGGFNPMGTAGRQ 361
Query: 116 LIVENLSSRVSWQDLKDFMRQV---GEVCYADAHK----RHRNEGVVEFESSSDMKKALD 168
L V NL + WQDLKD RQ G + AD H R + G+V FES D + A+
Sbjct: 362 LYVSNLPFNIGWQDLKDLFRQAARQGAIIRADVHMGPDGRPKGSGIVVFESPDDARNAIQ 421
Query: 169 KLDNAELNGRRIRLIEDK 186
+ + E NGR I + ED+
Sbjct: 422 QFNGYEWNGRIIEVREDR 439
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 77 RSQERGRRGYGSYRAPPPRRGWGHDRDDR-------YGPPTRSDHRLIVENLSSRVSWQD 129
+ Q+ G+ Y APPP G DR R ++ D R+ V NLS V W
Sbjct: 201 QPQQTGQSSNTGYNAPPPHHGSYEDRAARREQVMNNIRETSQQDRRVYVGNLSYDVKWHH 260
Query: 130 LKDFMRQVGEVCYADA------HKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
LKDFMRQ GEV YAD + +VE+ + + A+ L N L GR I +
Sbjct: 261 LKDFMRQAGEVLYADVLLLPNGMSKVGAYNIVEYATREQAQHAIATLSNQNLMGRLIYVR 320
Query: 184 EDK 186
ED+
Sbjct: 321 EDR 323
>gi|90076960|dbj|BAE88160.1| unnamed protein product [Macaca fascicularis]
Length = 182
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 105 RYGPPTR-SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
RYGPP+R S++R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM
Sbjct: 40 RYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDM 97
Query: 164 KKALDKLDNAEL 175
A+ KLDN +
Sbjct: 98 TYAVRKLDNTKF 109
>gi|392862747|gb|EAS36587.2| RNP domain-containing protein [Coccidioides immitis RS]
Length = 473
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 27/201 (13%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-----KNGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ L+ F++ G + DV+L G G VE+ A +AV L
Sbjct: 105 RVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREQAQNAVATL 164
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS--DHR 115
+ ++L+G V V DR E G PP R G +G S +
Sbjct: 165 SNQNLMGRLVYVRE----DREAEPRFTG-------PPHRDAGGAGRGGFGGGYGSFASRQ 213
Query: 116 LIVENLSSRVSWQDLKDFMRQV---GEVCYADAHK----RHRNEGVVEFESSSDMKKALD 168
+ V NL V WQDLKD RQ G V AD H R + G+V FE+ D + A+
Sbjct: 214 IYVNNLPFNVGWQDLKDLFRQATQQGTVARADVHLDPNGRPKGSGIVAFENVEDARNAIQ 273
Query: 169 KLDNAELNGRRIRLIEDKPRG 189
+ + E +GR + + ED+ G
Sbjct: 274 QFNGYEWHGRTLEVREDRFAG 294
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKK 165
++ D R+ V NLS V W LKDFMRQ GEV +AD + + G+VE+ + +
Sbjct: 100 SQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREQAQN 159
Query: 166 ALDKLDNAELNGRRIRLIEDK 186
A+ L N L GR + + ED+
Sbjct: 160 AVATLSNQNLMGRLVYVREDR 180
>gi|224009309|ref|XP_002293613.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971013|gb|EED89349.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 189
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 86/188 (45%), Gaps = 23/188 (12%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI-RDVILKN------GFGFVEFEDYRDADDAVYEL 57
+VY+G L + RDL+ +K G + R I++ G G VE+ +A AV EL
Sbjct: 1 RVYVGNLSWSTGWRDLKDHMKACGDVLRADIMQTHDGRSKGCGIVEYSSPEEAARAVEEL 60
Query: 58 NGKSLLGERVTVEIAKGIDRSQERG---RRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
N L G ++ V DR Q G R G G + H+ G P
Sbjct: 61 NNSELSGRQIFVRE----DREQTTGSNNRHGGGGFNNQRS-----HNTSYMQGSPAEEGC 111
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK----RHRNEGVVEFESSSDMKKALDKL 170
+L V NLS W++LKD RQ GEV A+ + R R G+V F S+ D + A+ KL
Sbjct: 112 QLFVGNLSWETGWRELKDHFRQCGEVDRAEVAEGNDGRKRGFGLVRFHSAKDAQAAIRKL 171
Query: 171 DNAELNGR 178
+ + GR
Sbjct: 172 NGVDFMGR 179
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRH----RNEGVVEFESSSDMKKALDKL 170
R+ V NLS W+DLKD M+ G+V AD + H + G+VE+ S + +A+++L
Sbjct: 1 RVYVGNLSWSTGWRDLKDHMKACGDVLRADIMQTHDGRSKGCGIVEYSSPEEAARAVEEL 60
Query: 171 DNAELNGRRIRLIEDKPR---------GGGRGRSRSSSS 200
+N+EL+GR+I + ED+ + GGG RS ++
Sbjct: 61 NNSELSGRQIFVREDREQTTGSNNRHGGGGFNNQRSHNT 99
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVY 55
M GT+V++G LP VRER++E YGRIR V LK G F FVEFED RDA DAV
Sbjct: 1 MAGTRVFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVR 60
Query: 56 ELNGKSLLGERVTVEIAKG 74
+G G+R+ VE++ G
Sbjct: 61 GRDGIEFQGQRLRVEVSHG 79
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 106 YGPPTRSDH-RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDM 163
+GP R+D R+IV NL SWQDLKD MR+ GEV ++ + R G++++ + SD+
Sbjct: 161 FGPSRRTD-FRVIVTNLPLSCSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDYATRSDL 219
Query: 164 KKALDKLDNAEL----NGRRIRLIEDK 186
+ AL KLD++E + RIR+ ED+
Sbjct: 220 ELALRKLDDSEFKNPYDTARIRVREDR 246
>gi|158429186|pdb|2O3D|A Chain A, Structure Of Human Sf2ASF RNA RECOGNITION MOTIF 2 (RRM2)
Length = 113
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 105 RYGPPTR-SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDM 163
RYGPP+R S++R++V L SWQDLKD MR+ G+VCYAD ++ GVVEF DM
Sbjct: 6 RYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDM 63
Query: 164 KKALDKLDNAEL 175
A+ KLDN +
Sbjct: 64 TYAVRKLDNTKF 75
>gi|225470972|ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis
vinifera]
Length = 241
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
++ G Y R+ DLE+ YGR+ V +K+GF FV FED DADDA+ L+ +
Sbjct: 4 IFCGNFEYETRQSDLERLFSKYGRVERVDMKSGFAFVYFEDEHDADDAIRGLDNIPFGYD 63
Query: 66 --RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R++VE AKG ERGR GS R + R PT++ L V N
Sbjct: 64 RRRLSVEWAKG-----ERGRHREGS-------RSMANQR------PTKT---LFVINFDP 102
Query: 124 -RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSD---------MKKALDKLDNA 173
R +D++ G+V + + RN V++E+ D M K LD++ +
Sbjct: 103 IRTRIRDIERHFEPYGKVLHV---RIRRNFAFVQYETQEDATKALECTHMSKILDRVVSV 159
Query: 174 ELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSK 233
E R D PR GG R R S +S SP +R SP +++
Sbjct: 160 EYALRDDSDKYDSPRRGGYSR------------RGESPYGRSPSPVNRRGRPSPDYGRAQ 207
Query: 234 AKSVSRSPSPSKTRKRS 250
+ R P+ R RS
Sbjct: 208 SPVYDRYNGPAYERNRS 224
>gi|374107494|gb|AEY96402.1| FADR183Cp [Ashbya gossypii FDAG1]
Length = 320
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 37/184 (20%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++++ P V E +L++ YG +++V L +GF FVEFE A+ A+ ++NGK
Sbjct: 37 TRLHVKPFPPDVEEHELDEIFSPYGALKEVKLMSGFAFVEFEKPESAEQAIKDVNGKMFA 96
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
+TV + R P PR R+ + NL
Sbjct: 97 DMPLTVSYS-----------------RMPMPR------------------FRIKIRNLPE 121
Query: 124 RVSWQDLKDFMRQVG-EVCYADAHKRHRN-EGVVEFESSSDMKKALDKLDNAELNGRRIR 181
++WQ+LKD R+ E ++ + + G +EF S +++AL+KL+N E G +
Sbjct: 122 GIAWQELKDLARENNLETTFSSVDTSNFDGTGALEFSSEEILEEALEKLNNYEFRGNVLA 181
Query: 182 LIED 185
+ D
Sbjct: 182 VERD 185
>gi|449672696|ref|XP_004207773.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Hydra
magnipapillata]
Length = 115
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
++++IGGLP +LEK + +GR+RDV + +N GFGF+ FED RDA+DAV E++GK
Sbjct: 2 SRIFIGGLPEDASRNELEKEFESFGRLRDVWVARNPPGFGFIIFEDARDAEDAVREMDGK 61
Query: 61 SLLGERVTVEIAKG 74
+ G R+ VE A+G
Sbjct: 62 RVCGSRIRVEFARG 75
>gi|226467215|emb|CAX76088.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 242
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
MR+ GEV YADAHK +N+G+VEF + +DMK+A++K D EL GRR+R+ ED+P
Sbjct: 1 MRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDGYELYGRRLRVYEDRP 54
>gi|389582698|dbj|GAB65435.1| pre-mRNA splicing factor, partial [Plasmodium cynomolgi strain B]
Length = 450
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 107 GPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKA 166
GPP R++HR+I+ NL WQ LKD MRQ G+V YA+ R +GVVEF + DM A
Sbjct: 12 GPPVRTEHRIIISNLPESCKWQHLKDAMRQCGDVGYANI---ERGKGVVEFINRDDMLYA 68
Query: 167 LDKLDNAEL 175
++K D +E
Sbjct: 69 IEKFDGSEF 77
>gi|299747512|ref|XP_002911181.1| hypothetical protein CC1G_14612 [Coprinopsis cinerea okayama7#130]
gi|298407553|gb|EFI27687.1| hypothetical protein CC1G_14612 [Coprinopsis cinerea okayama7#130]
Length = 322
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 29/234 (12%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGY-GRIRDVILKNGFGFVEFEDYRDADDAVYELNG 59
+ ++Y+ GL V +L K I +V + + FVEF+ DA
Sbjct: 4 LPAKRLYLRGLDRDVTPEELLKAKATLKAHINEVKFVHNYAFVEFDSESDARLVYNIFRS 63
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP-----PPRRGWGHDRDDRYGPPTRSDH 114
LLG+ V ++ A+ + + + G ++AP P RG T S H
Sbjct: 64 SPLLGKEVVIQFARPLRKDIAALQNDLG-WKAPTLVRRPSPRG------------TASRH 110
Query: 115 RLIVENLSSRVSWQDLKDFMRQVG-EVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
++V + V WQ+LKDF R G V Y D + G +E+ S D + A+ LD A
Sbjct: 111 PVVVMGIPEEVRWQELKDFGRSTGCLVAYCDLDPSSESNGFIEYFSKEDAEYAIRTLDGA 170
Query: 174 ELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSP 227
L GRR+R++ S + S R R + ++ P + + + SP
Sbjct: 171 TLGGRRVRVVP---------YSEAVSERRRKTFHDAPLPAHAKGPNAMASTSSP 215
>gi|410988846|ref|XP_004000688.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Felis
catus]
Length = 164
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV ELNG+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELNGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG 99
+L G RV VE++ G RS+ RG PPP WG
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPP--SWG 97
>gi|325179817|emb|CCA14220.1| RNA binding protein putative [Albugo laibachii Nc14]
Length = 360
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN------GFGFVEFEDYRDADDAV 54
+ G +VY+G L + V+ +DL+ ++ G + ++ G G V + +A +A+
Sbjct: 67 VTGRRVYVGNLSWKVKWQDLKDHMRSAGDVEHAVIMEVGGRSKGCGIVTYATESEAQNAI 126
Query: 55 YELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
LN L G ++ V DR + + A P +G
Sbjct: 127 ETLNDTELDGRKIFVRE----DREE--------NASAQPRAKGC---------------- 158
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRH----RNEGVVEFESSSDMKKALDKL 170
R+ V NL V WQ LKD M+Q G V +AD + + G+VEF + + + A+D L
Sbjct: 159 RVYVGNLPWTVKWQALKDHMKQAGTVIHADVLEEAGGWSKGCGLVEFSTPDEAQNAIDML 218
Query: 171 DNAELNGRRIRLIED-KPRGG 190
++ EL GR I + ED +P GG
Sbjct: 219 NDTELEGRNIFVREDREPDGG 239
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 11/94 (11%)
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYA---DAHKRHRNEGVVEFESSSDMKKALDKLD 171
R+ V NLS +V WQDLKD MR G+V +A + R + G+V + + S+ + A++ L+
Sbjct: 71 RVYVGNLSWKVKWQDLKDHMRSAGDVEHAVIMEVGGRSKGCGIVTYATESEAQNAIETLN 130
Query: 172 NAELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSK 205
+ EL+GR+I + ED R ++S++ R+K
Sbjct: 131 DTELDGRKIFVRED--------REENASAQPRAK 156
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 32/209 (15%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRI--RDVI-----LKNGFGFVEFEDYRDADDAVY 55
G +VY+G LP+ V+ + L+ +K G + DV+ G G VEF +A +A+
Sbjct: 157 GCRVYVGNLPWTVKWQALKDHMKQAGTVIHADVLEEAGGWSKGCGLVEFSTPDEAQNAID 216
Query: 56 ELNGKSLLGERVTV------------EIAKGIDRSQERGRRGYGS-YRAPPPRRGWGHDR 102
LN L G + V IA+ R S + PR G
Sbjct: 217 MLNDTELEGRNIFVREDREPDGGSITSIARRGGRGGRSSGGRGNSRFAGRGPREG----- 271
Query: 103 DDRYGPPTRSDHRLI-VENLSSRVSWQDLKDFMRQVGEVCYADAHK----RHRNEGVVEF 157
G SD + + V NL + ++L++ + G+V A+ + R R G+V+F
Sbjct: 272 --NSGHSHSSDVKQVYVGNLPWDTTSRNLENLFQSAGDVERAEVVEFPDGRSRGFGIVKF 329
Query: 158 ESSSDMKKALDKLDNAELNGRRIRLIEDK 186
+SSS+ + A+D+L+ E NGRR+ + DK
Sbjct: 330 KSSSEAQCAIDELNGTEHNGRRLEVRLDK 358
>gi|256077398|ref|XP_002574992.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229594|emb|CCD75765.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 244
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIEDKP 187
MR+ GEV YADAHK +N+G+VEF + +DMK+A++K D EL GRR+R+ ED+P
Sbjct: 1 MRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDGYELYGRRLRVYEDRP 54
>gi|324516214|gb|ADY46460.1| Serine/arginine-rich splicing factor 6 [Ascaris suum]
Length = 150
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 42/52 (80%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
MR GEV +ADAHK+H NEGVV F+S D+++ALDKL E+NGR+++LI+D
Sbjct: 1 MRTAGEVTFADAHKQHANEGVVCFQSREDLERALDKLQGKEVNGRKLKLIDD 52
>gi|297828391|ref|XP_002882078.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
gi|297327917|gb|EFH58337.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
Length = 250
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 111/262 (42%), Gaps = 31/262 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
V++G Y R+ DLE+ YGR+ V +K+G+ FV FED RDA+DA+ + + E
Sbjct: 4 VFVGNFDYDTRQSDLERLFSKYGRVERVDMKSGYAFVYFEDERDAEDAIRGTDNTTFGYE 63
Query: 66 R--VTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R ++VE AKG +G R G RD + R L V N
Sbjct: 64 RRKLSVEWAKGF-----KGER--------------GKPRDGKAASNQRPTKTLFVINFDP 104
Query: 124 -RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL 182
R +D++ G+V + RN V+F + D KALD N+++ R + +
Sbjct: 105 IRTRERDMERHFEPYGKVLNV---RIRRNFAFVQFATQEDATKALDCTHNSKILDRVVSV 161
Query: 183 IEDKPRGGGRGRSRSSSSRSRSKS-----RSRSRSSKSRSPR-SRSKSGSPRKSKSKAKS 236
G R + S R RS S R + RSP R K +P + +
Sbjct: 162 EYALREDGEREDRYAGSPRRRSPSPVYRRRPSPDYGRPRSPEYDRYKGPAPYERRRSPDY 221
Query: 237 VSRSPSPSKTRKRSRSRSDSRA 258
RSP + R RS SR+
Sbjct: 222 RRRSPDYGRARARSPGYDSSRS 243
>gi|239608856|gb|EEQ85843.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 534
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 92/201 (45%), Gaps = 29/201 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-----KNGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ L+ F++ G + DV+L G G VE+ +A +AV L
Sbjct: 161 RVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREEAQNAVATL 220
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH--- 114
+ ++L+G V V DR E + PP R +G YG
Sbjct: 221 SNQNLMGRLVYVRE----DREAEP------RFTGPPARGDFGGPGRGGYGGYAPGPGASG 270
Query: 115 --RLIVENLSSRVSWQDLKDFMRQV---GEVCYADAHK----RHRNEGVVEFESSSDMKK 165
++ V NL V WQDLKD RQ G V AD H R + G+V FES+ D +
Sbjct: 271 GRQIYVSNLPFNVGWQDLKDLFRQAAQQGAVVRADVHIDPSGRPKGSGIVAFESADDARN 330
Query: 166 ALDKLDNAELNGRRIRLIEDK 186
A+ + + + GR + + ED+
Sbjct: 331 AIQQFNGYDWQGRTLEVREDR 351
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKK 165
++ D R+ V NLS V W LKDFMRQ GEV +AD + + G+VE+ + + +
Sbjct: 156 SQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREEAQN 215
Query: 166 ALDKLDNAELNGRRIRLIEDK 186
A+ L N L GR + + ED+
Sbjct: 216 AVATLSNQNLMGRLVYVREDR 236
>gi|168038912|ref|XP_001771943.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676725|gb|EDQ63204.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878393|gb|AGE46159.1| arginine/serine-rich splicing factor RS27 transcript I
[Physcomitrella patens subsp. patens]
Length = 233
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 40/239 (16%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
VY G Y R+ ++E+ K YGR+ V +K GF F+ ED RDA+DA+ L+ +
Sbjct: 8 VYCGNFEYDARQSEIERLFKEYGRVERVDMKTGFSFIYMEDERDAEDAIRHLDNMEFGRQ 67
Query: 66 --RVTVEIAK---GIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
R++VE AK G R +E RR R P+++ + +
Sbjct: 68 RRRLSVEWAKQGDGAIRRREDARRNNTKLR------------------PSKTLFVVNFDP 109
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFES---------SSDMKKALDKLD 171
+++RV +DL+ G++ K N G V++E+ S++M K +D++
Sbjct: 110 INTRV--RDLERHFEPYGKLVRVQIRK---NFGFVQYETQDEATKALESTNMSKVMDRVI 164
Query: 172 NAELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSR---SSKSRSPRSRSKSGSP 227
E R RGG R R SS S S R RS S ++RSP +R +S SP
Sbjct: 165 TVEYAAREDGEPPSSGRGGSPSRYRGSSRGSPSYGRDRSPVRGSGRNRSPPARGRSRSP 223
>gi|45188056|ref|NP_984279.1| ADR183Cp [Ashbya gossypii ATCC 10895]
gi|44982873|gb|AAS52103.1| ADR183Cp [Ashbya gossypii ATCC 10895]
Length = 320
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 37/181 (20%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
T++++ P V E +L++ YG +++V L +GF FVEFE A+ A+ ++NGK
Sbjct: 37 TRLHVKPFPPDVEEHELDEIFSPYGALKEVKLMSGFAFVEFEKPESAEQAIKDVNGKMFA 96
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
+TV + R P PR R+ + NL
Sbjct: 97 DMPLTVSYS-----------------RMPMPR------------------FRIKIRNLPE 121
Query: 124 RVSWQDLKDFMRQVG-EVCYADAHKRHRN-EGVVEFESSSDMKKALDKLDNAELNGRRIR 181
++WQ+LKD R+ E + + + G +EF S +++AL+KL+N E G +
Sbjct: 122 GIAWQELKDLARENNLETTFLSVDTSNFDGTGALEFSSEEILEEALEKLNNYEFRGNVLA 181
Query: 182 L 182
+
Sbjct: 182 V 182
>gi|320031479|gb|EFW13442.1| hypothetical protein CPSG_09988 [Coccidioides posadasii str.
Silveira]
Length = 382
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 27/201 (13%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIR--DVIL-----KNGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ L+ F++ G + DV+L G G VE+ A +AV L
Sbjct: 14 RVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREQAQNAVATL 73
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS--DHR 115
+ ++L+G V V DR E G PP R G +G S +
Sbjct: 74 SNQNLMGRLVYVRE----DREAEPRFTG-------PPHRDAGGAGRGGFGGGYGSFASRQ 122
Query: 116 LIVENLSSRVSWQDLKDFMRQV---GEVCYADAHK----RHRNEGVVEFESSSDMKKALD 168
+ V NL V WQDLKD RQ G V AD H R + G+V FE+ D + A+
Sbjct: 123 IYVNNLPFNVGWQDLKDLFRQATQQGTVARADVHLDPNGRPKGSGIVAFENVEDARNAIQ 182
Query: 169 KLDNAELNGRRIRLIEDKPRG 189
+ + E +GR + + ED+ G
Sbjct: 183 QFNGYEWHGRTLEVREDRFAG 203
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKK 165
++ D R+ V NLS V W LKDFMRQ GEV +AD + + G+VE+ + +
Sbjct: 9 SQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREQAQN 68
Query: 166 ALDKLDNAELNGRRIRLIEDK 186
A+ L N L GR + + ED+
Sbjct: 69 AVATLSNQNLMGRLVYVREDR 89
>gi|82595824|ref|XP_726007.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481235|gb|EAA17572.1| similar to splicing factor, arginine/serine-rich 4, putative
[Plasmodium yoelii yoelii]
Length = 715
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 14/193 (7%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
K+++G + RE ++ K YG I ++ K F F+E+ A++A+ NGK +
Sbjct: 261 CKIFVGNISPDAREEEVRKKFSKYGDIINIQWKRRFAFIEYSKPVYAENAISGENGKHYM 320
Query: 64 GERVTVEIAKGIDRSQERGRRGYGS----YRAPPPRRGWGHDR---DDRYGPPTRSDH-R 115
GE ++V+ A + + YG+ YR P + R D+++ + + R
Sbjct: 321 GEELSVQ-AHHLSPFKNNYNNSYGNVYNNYRNDPRNYENKYSRNYSDNKFESIEKKNSLR 379
Query: 116 LIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE-----GVVEFESSSDMKKALDKL 170
++V+N+ +VSWQDLKDF R+VG V YA+ + G++E+ + MK+A+D L
Sbjct: 380 IVVKNIDEKVSWQDLKDFGREVGLVNYANVVYNNNGNNKEYYGIIEYYNYETMKRAIDVL 439
Query: 171 DNAELNGRRIRLI 183
+ + NG + ++
Sbjct: 440 NGKKFNGVPVEVV 452
>gi|261203825|ref|XP_002629126.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239586911|gb|EEQ69554.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|327356167|gb|EGE85024.1| hypothetical protein BDDG_07969 [Ajellomyces dermatitidis ATCC
18188]
Length = 471
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 92/201 (45%), Gaps = 29/201 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-----KNGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ L+ F++ G + DV+L G G VE+ +A +AV L
Sbjct: 97 RVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREEAQNAVATL 156
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH--- 114
+ ++L+G V V DR E + PP R +G YG
Sbjct: 157 SNQNLMGRLVYVRE----DREAEP------RFTGPPARGDFGGPGRGGYGGYAPGPGASG 206
Query: 115 --RLIVENLSSRVSWQDLKDFMRQV---GEVCYADAH----KRHRNEGVVEFESSSDMKK 165
++ V NL V WQDLKD RQ G V AD H R + G+V FES+ D +
Sbjct: 207 GRQIYVSNLPFNVGWQDLKDLFRQAAQQGAVVRADVHIDPSGRPKGSGIVAFESADDARN 266
Query: 166 ALDKLDNAELNGRRIRLIEDK 186
A+ + + + GR + + ED+
Sbjct: 267 AIQQFNGYDWQGRTLEVREDR 287
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKK 165
++ D R+ V NLS V W LKDFMRQ GEV +AD + + G+VE+ + + +
Sbjct: 92 SQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREEAQN 151
Query: 166 ALDKLDNAELNGRRIRLIEDK 186
A+ L N L GR + + ED+
Sbjct: 152 AVATLSNQNLMGRLVYVREDR 172
>gi|125550950|gb|EAY96659.1| hypothetical protein OsI_18573 [Oryza sativa Indica Group]
Length = 338
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+++Y+G + R DLE YGR+R V LKN +GFVEF D RDA+DA +L+G+
Sbjct: 18 SRLYVGHISLCTRAEDLENLFSRYGRVRFVDLKNEYGFVEFSDPRDANDARLDLDGRKYD 77
Query: 64 GERVTVEIAKGIDRSQERGRRGY 86
G + V+ A+G++R G RGY
Sbjct: 78 GSDIIVQFARGVERGLG-GSRGY 99
>gi|392578268|gb|EIW71396.1| hypothetical protein TREMEDRAFT_71152 [Tremella mesenterica DSM
1558]
Length = 524
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 90/206 (43%), Gaps = 37/206 (17%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----------GFGFVEFEDYRDADDA 53
++YIG L Y +DLEKF++G G DVI G G VEF + D A
Sbjct: 134 NRLYIGNLAYHCNYKDLEKFMRGSGG--DVIFTEIFITPAGQSKGCGIVEFSNPEDTKKA 191
Query: 54 VYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRR---GWGHDRD------D 104
EL+ K L G V + + +E R G AP P + G R+
Sbjct: 192 KEELSEKPLFGRNVHIR-----EDREENARFGM----APIPGKVGVATGESRNFLGAHGP 242
Query: 105 RYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYAD--AHK--RHRNEGVVEFESS 160
R+ P R+ + V NL + SWQDLKD MRQ GEV AD H + G V + +
Sbjct: 243 RFNPANRN---IFVGNLPLQASWQDLKDLMRQAGEVIRADIGVHPDGNPKGNGTVVYLTP 299
Query: 161 SDMKKALDKLDNAELNGRRIRLIEDK 186
+ A+ + + G + + ED+
Sbjct: 300 EAARAAIQMFNGFDWFGNVLEVREDR 325
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 113 DHRLIVENLSSRVSWQDLKDFMR-QVGEVCYADAH----KRHRNEGVVEFESSSDMKKAL 167
++RL + NL+ +++DL+ FMR G+V + + + + G+VEF + D KKA
Sbjct: 133 ENRLYIGNLAYHCNYKDLEKFMRGSGGDVIFTEIFITPAGQSKGCGIVEFSNPEDTKKAK 192
Query: 168 DKLDNAELNGRRIRLIEDK 186
++L L GR + + ED+
Sbjct: 193 EELSEKPLFGRNVHIREDR 211
>gi|224068024|ref|XP_002302651.1| predicted protein [Populus trichocarpa]
gi|222844377|gb|EEE81924.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 108/247 (43%), Gaps = 25/247 (10%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
V++G + R+ DLE+ YGR+ V +K+GF FV FED RDA DAV L+ +
Sbjct: 5 VFVGNFEHETRQSDLERLFSKYGRVERVDMKSGFAFVYFEDDRDAADAVRGLDNIPFGYD 64
Query: 66 --RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R++VE A+G ERGR G R + R PT++ + + + +
Sbjct: 65 RRRLSVEWARG-----ERGRHRDGP-------RSTANQR------PTKTLFVINFDPIHT 106
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
RV +D+K + GEV + + RN V+FE+ D KAL+ ++ R + +
Sbjct: 107 RV--EDIKRHFERYGEVLHV---RIRRNFAFVQFETQEDATKALECTHMTKILDRVVSVE 161
Query: 184 EDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKAKSVSRSPSP 243
RG S R RS S + R ++ SP K R SP
Sbjct: 162 YALRDDSERGDRYDSPRRGSYNGRSPSPVYRRRPSPDYVRARSPVYDKYNGPVYDRRQSP 221
Query: 244 SKTRKRS 250
R RS
Sbjct: 222 DYGRNRS 228
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 26/177 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG-----FGFVEFEDYRDADDAVYELN 58
+++YIG LP +R+LE+ + +GRI LK F F+EF D RDA DA+ + +
Sbjct: 7 SRIYIGNLPEDCSQRELEEEFEKFGRIIYCELKKSYSGSPFAFIEFSDSRDARDAIRDKD 66
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G G+++ VE+ R ++ RR P R + R +Y L V
Sbjct: 67 GYEFHGKKLRVELPF---RYKDEPRR--------PSGRRYRTTRRGKY--------VLEV 107
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
L SWQDLKD MR GE +AD + G + F S SDM A+++ D +
Sbjct: 108 TGLPPSGSWQDLKDHMRDAGECGHADVFR--GGVGEITFFSRSDMDYAIERFDGSTF 162
>gi|452822290|gb|EME29311.1| splicing factor, arginine/serine-rich 7 [Galdieria sulphuraria]
Length = 258
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 MVGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGK 60
M K+Y+G + RDLE YGR+RDV L + + FVE D RDA+DA Y L+GK
Sbjct: 1 MPTRKLYVGNVSRHATRRDLEDLFSKYGRVRDVRLLSDYAFVEMGDERDAEDARYYLDGK 60
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGS 88
L GER+ VE AK +R+ R + Y
Sbjct: 61 RLEGERIRVEFAKN-ERAPPRQPKCYNC 87
>gi|344302325|gb|EGW32630.1| hypothetical protein SPAPADRAFT_61691 [Spathaspora passalidarum
NRRL Y-27907]
Length = 291
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 36/189 (19%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKS 61
V T++++ + + V LE+ G + DV L GF FV F++ DA AV LN
Sbjct: 14 VSTQLFVRPIGFDVPREQLEEHFAPAGHVVDVQLMRGFAFVRFDNEEDATRAVETLNDSE 73
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENL 121
G+R+ VE AK +R ++ TR +R+ + NL
Sbjct: 74 FDGQRLLVEYAK--ERKED-----------------------------TRGKYRVKLTNL 102
Query: 122 SSRVSWQDLKDFMRQV--GEVCYADAHKRH-RNE--GVVEFESSSDMKKALDKLDNAELN 176
+WQD+KDF+R E Y + + NE G +EF S+ +++KA+ LD AE
Sbjct: 103 EDGTAWQDIKDFVRDKTDSEPSYVKVFRNYDTNEIVGALEFSSAEELEKAIPLLDKAEFR 162
Query: 177 GRRIRLIED 185
G I ED
Sbjct: 163 GVVIGAEED 171
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 73/154 (47%), Gaps = 29/154 (18%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
+++Y+G LP V RD+E + +G I +K F F+EFED RDA DA+ E +
Sbjct: 8 SRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKD 67
Query: 59 GKSLLGERVTVEI---AKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
G G ++ VE+ A+ + RGR G R RRG R
Sbjct: 68 GCDFGGNKLRVEVPFNARDNGKYNSRGRGMMG--RGSKSRRG-----------------R 108
Query: 116 LIVE--NLSSRVSWQDLKDFMRQVGEVCYADAHK 147
+VE L SWQDLKD +R+ GE +AD K
Sbjct: 109 YVVEVSGLPLSGSWQDLKDHLREAGECGHADVFK 142
>gi|325089108|gb|EGC42418.1| RNP domain-containing protein [Ajellomyces capsulatus H88]
Length = 471
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 92/204 (45%), Gaps = 29/204 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-----KNGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ L+ F++ G + DV+L G G VE+ A +AV L
Sbjct: 98 RVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYASREQAQNAVATL 157
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPP-----TRS 112
+ ++L+G V V DR E + P R +G YG T
Sbjct: 158 SNQTLMGRLVYVRE----DREAEP------RFTGQPARNDFGGPGRGGYGGYASGPGTGG 207
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQV---GEVCYADAHK----RHRNEGVVEFESSSDMKK 165
++ V NL V WQDLKD RQ G V AD H R + G+V FES+ D +
Sbjct: 208 GRQIYVSNLPFNVGWQDLKDLFRQAAQHGAVVRADVHADPSGRPKGSGIVAFESADDARN 267
Query: 166 ALDKLDNAELNGRRIRLIEDKPRG 189
A+ + + + GR + + ED+ G
Sbjct: 268 AIQQFNGYDWQGRTLEVREDRYAG 291
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKK 165
++ D R+ V NLS V W LKDFMRQ GEV +AD + + G+VE+ S +
Sbjct: 93 SQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYASREQAQN 152
Query: 166 ALDKLDNAELNGRRIRLIED---KPRGGGR 192
A+ L N L GR + + ED +PR G+
Sbjct: 153 AVATLSNQTLMGRLVYVREDREAEPRFTGQ 182
>gi|238883218|gb|EEQ46856.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 465
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 108/263 (41%), Gaps = 46/263 (17%)
Query: 6 VYIGGLPYGVRERDLEK-FVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++IG +P+ RD+E F K + +R I+ N G VEF D +A+ + +
Sbjct: 130 IFIGNIPFDCTSRDIEDIFKKDFSIVRADIVTNKGRSRGMATVEFNSKDDVREAINKFDR 189
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHD-----------------R 102
G + V D + YG PP RG +D R
Sbjct: 190 YEYRGREIFVRQ----DYPPPEKKHDYG----PPRGRGTTYDSRSGGRDRYSDRYQSSRR 241
Query: 103 DDRYGPP---TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVV 155
+D Y PP ++ + + NL V+WQ LKD MR GEV AD + R G V
Sbjct: 242 NDNYAPPAPPSKPGTEVFIGNLPFSVNWQALKDLMRDAGEVIRADVRLDNYGNSRGFGTV 301
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKS 215
F + + KA++ E+ GR+ ++ +P GRS SSS S S +++
Sbjct: 302 VFNTEEEAAKAVEMFQGYEIEGRK---LDTRP-----GRSTGSSSGYERDSYRSSDTTEK 353
Query: 216 RSPRSRSKSGSPRKSKSKAKSVS 238
S RSKS K+ V+
Sbjct: 354 SSYGDRSKSAVVNKNSEFTDGVT 376
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 25/203 (12%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRI--RDVILKN-----GFGFVEFEDYRDADDAVY 55
GT+V+IG LP+ V + L+ ++ G + DV L N GFG V F +A AV
Sbjct: 255 GTEVFIGNLPFSVNWQALKDLMRDAGEVIRADVRLDNYGNSRGFGTVVFNTEEEAAKAVE 314
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGH-------DRDDRYGP 108
G + G ++ + S R Y S + +G +++ +
Sbjct: 315 MFQGYEIEGRKLDTRPGRSTGSSSGYERDSYRS-SDTTEKSSYGDRSKSAVVNKNSEFTD 373
Query: 109 PTRSD----HRLIVENLSSRVSWQDLKDFMRQVG-----EVCYADAHKRHRNEGVVEFES 159
+D + V NL DL D VG E+ YAD R VV+FE
Sbjct: 374 GVTADGEKSDTIYVANLPFATQDDDLYDLFETVGRTTKAEIQYAD-DGRPSGNAVVQFEI 432
Query: 160 SSDMKKALDKLDNAELNGRRIRL 182
+ + A+ +L+N GR +++
Sbjct: 433 ADLAENAISQLNNYLYGGRNLQI 455
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 86/181 (47%), Gaps = 32/181 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+Y+G LP ++E ++E YGRI D+ LK + FVEFE RDA+DA+ +G
Sbjct: 9 IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGY 68
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
+ G R+ VE+A G GR S DR YG + +
Sbjct: 69 NFDGCRLRVELAHG-------GRGPSSS------------DRRSSYGGGGGGGGQGFL-- 107
Query: 121 LSSRVSWQDL-----KDFMRQVGEVCYADAHKRHRNE-GVVEFESSSDMKKALDKLDNAE 174
L V +L +D MR+ G+VC+A+ + G+V++ + DMK A+ KLD+ E
Sbjct: 108 LLDYVDMMNLLEXCFQDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTE 167
Query: 175 L 175
Sbjct: 168 F 168
>gi|221112060|ref|XP_002166312.1| PREDICTED: uncharacterized protein LOC100212585 isoform 1 [Hydra
magnipapillata]
Length = 218
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
++++IGGLP +LE+ + GR+RD+ + +N GFGF+ FED RDADDAV E++GK
Sbjct: 2 SRIFIGGLPEDATRTELEREFEHIGRMRDIWVARNPPGFGFIIFEDPRDADDAVREMDGK 61
Query: 61 SLLGERVTVEIAKG 74
+ G +V VE A+G
Sbjct: 62 RVCGSKVRVEKARG 75
>gi|145350218|ref|XP_001419511.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579743|gb|ABO97804.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 194
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 85/192 (44%), Gaps = 36/192 (18%)
Query: 4 TKVYIGGLPYGVRERDL-EKFVKGYG----RIRDVILK-----NGFGFVEFEDYRDADDA 53
TKVY+G LPYG +DL + F G R D++ G G V F DA A
Sbjct: 14 TKVYVGNLPYGCSWQDLKDHFSNAMGGESVRFADILTSRDGRSKGCGIVTFNSSEDAKKA 73
Query: 54 VYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-PTRS 112
+ ++ + +GER +I DR ERG +D +R GP T
Sbjct: 74 IETMH-DTEIGER---KIFVREDREGERG-----------------NDLRNRIGPSATSP 112
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK----RHRNEGVVEFESSSDMKKALD 168
D + V NL WQ+LKD R+VG V +AD R R GVV F + A++
Sbjct: 113 DASVYVGNLPWSTRWQELKDIFRKVGNVAHADVTMGFDGRSRGWGVVTFMDPQCAQVAIE 172
Query: 169 KLDNAELNGRRI 180
+L+ LN R +
Sbjct: 173 RLNGTMLNDRAL 184
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 108 PPTRSDHRLIVENLSSRVSWQDLKD-FMRQVG--EVCYADAHK----RHRNEGVVEFESS 160
P +D ++ V NL SWQDLKD F +G V +AD R + G+V F SS
Sbjct: 8 PAVNADTKVYVGNLPYGCSWQDLKDHFSNAMGGESVRFADILTSRDGRSKGCGIVTFNSS 67
Query: 161 SDMKKALDKLDNAELNGRRIRLIEDK 186
D KKA++ + + E+ R+I + ED+
Sbjct: 68 EDAKKAIETMHDTEIGERKIFVREDR 93
>gi|115462263|ref|NP_001054731.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|46981336|gb|AAT07654.1| unknown protein [Oryza sativa Japonica Group]
gi|113578282|dbj|BAF16645.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|215693366|dbj|BAG88748.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768462|dbj|BAH00691.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630300|gb|EEE62432.1| hypothetical protein OsJ_17224 [Oryza sativa Japonica Group]
Length = 338
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
+++Y+G + R DLE YGR+R V LKN +GFVEF D RDA+DA +L+G+
Sbjct: 18 SRLYVGHISLRTRAEDLENLFSRYGRVRFVDLKNEYGFVEFSDPRDANDARLDLDGRKYD 77
Query: 64 GERVTVEIAKGIDRSQERGRRGY 86
G + V+ A+G++R G RGY
Sbjct: 78 GSDIIVQFARGVERGLG-GSRGY 99
>gi|449672680|ref|XP_004207768.1| PREDICTED: uncharacterized protein LOC100212585 isoform 2 [Hydra
magnipapillata]
Length = 179
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
++++IGGLP +LE+ + GR+RD+ + +N GFGF+ FED RDADDAV E++GK
Sbjct: 2 SRIFIGGLPEDATRTELEREFEHIGRMRDIWVARNPPGFGFIIFEDPRDADDAVREMDGK 61
Query: 61 SLLGERVTVEIAKG 74
+ G +V VE A+G
Sbjct: 62 RVCGSKVRVEKARG 75
>gi|320580860|gb|EFW95082.1| poly(A+) RNA-binding protein, putative [Ogataea parapolymorpha
DL-1]
Length = 405
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 30/189 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRI--RDVILKNG----FGFVEFEDYRDADDAVYELNG 59
+++G LPY DL+ + G + DV+ G G VEF +
Sbjct: 71 IFVGNLPYHTTWYDLKDLFREVGEVVRADVVTSRGRSRGMGTVEFAN------------- 117
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRR-GWGHDRDDRYGPPTRSD-HRLI 117
K L+ E ++ DR+ GR + PPP + G + R PP ++ + +
Sbjct: 118 KDLVQEAIS-----KFDRTMYEGREIFVREDLPPPEKENTGREERRRNAPPPSTEGYEVF 172
Query: 118 VENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE----GVVEFESSSDMKKALDKLDNA 173
+ NL V WQDLKD + G + AD + HR G V FE+S D +A+ +
Sbjct: 173 IGNLPFSVRWQDLKDLFKSCGPIIRADVREDHRGRSKGFGTVIFENSEDADRAIADFNGY 232
Query: 174 ELNGRRIRL 182
+++GRRI +
Sbjct: 233 DMDGRRIEV 241
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 99/245 (40%), Gaps = 42/245 (17%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-------GFGFVEFEDYRDADDAVY 55
G +V+IG LP+ VR +DL+ K G I ++ GFG V FE+ DAD A+
Sbjct: 168 GYEVFIGNLPFSVRWQDLKDLFKSCGPIIRADVREDHRGRSKGFGTVIFENSEDADRAIA 227
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRY-------GP 108
+ NG + G R+ V + K ++ + G R+ + G
Sbjct: 228 DFNGYDMDGRRIEVRLGKQFNKEPQ----------------GPTESRNSEFVAGVVGQGE 271
Query: 109 PTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYA----DAHKRHRNEGVVEFESSSDMK 164
P + + +NL S DL D + V A D R VV+F+
Sbjct: 272 PNDT---IFADNLPWETSETDLFDLFGSIASVKRAELQFDDLNRPAGTAVVQFQELDGAI 328
Query: 165 KALDKLDNAELNGRRIRLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKS 224
A+++LDN E RR+ + K RG + SS ++ S + S+ P +
Sbjct: 329 AAVNQLDNYEYGRRRLHVSFAK-----RGDAVSSEQNMDVEAESAQQPSEPSQPGPEVPA 383
Query: 225 GSPRK 229
P++
Sbjct: 384 VEPKE 388
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK---RHRNEGVVEFESSSDMKKALDK 169
++ + V NL +W DLKD R+VGEV AD R R G VEF + +++A+ K
Sbjct: 68 ENSIFVGNLPYHTTWYDLKDLFREVGEVVRADVVTSRGRSRGMGTVEFANKDLVQEAISK 127
Query: 170 LDNAELNGRRIRLIEDKP 187
D GR I + ED P
Sbjct: 128 FDRTMYEGREIFVREDLP 145
>gi|351700803|gb|EHB03722.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 266
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 70/153 (45%), Gaps = 25/153 (16%)
Query: 28 GRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERG 82
GRI ++ LKN F FV F+D RDA+DA+ NG R+ VE R+
Sbjct: 83 GRICEIELKNRHGLVPFAFVRFKDPRDAEDAICGRNGYDYGQCRLRVEFP----RTYGGR 138
Query: 83 RRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCY 142
R P RG SD R++V L SWQDLKD + + G+VCY
Sbjct: 139 GGCPRGGRTGAPARG--------------SDFRVLVSGLPPSGSWQDLKDHIPEAGDVCY 184
Query: 143 ADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
AD K G+VE DM AL KLD+ +
Sbjct: 185 ADVQK--DGMGMVEHLRKEDMDYALRKLDDTKF 215
>gi|225560818|gb|EEH09099.1| RNP domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 471
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 92/204 (45%), Gaps = 29/204 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-----KNGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ L+ F++ G + DV+L G G VE+ A +AV L
Sbjct: 98 RVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYASREQAQNAVATL 157
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPP-----TRS 112
+ ++L+G V V DR E + P R +G YG T
Sbjct: 158 SNQTLMGRLVYVRE----DREAEP------RFTGQPARNDFGGPGRGGYGGYASGPGTGG 207
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQV---GEVCYADAHK----RHRNEGVVEFESSSDMKK 165
++ V NL V WQDLKD RQ G V AD H R + G+V FES+ D +
Sbjct: 208 GRQIYVSNLPFNVGWQDLKDLFRQAAQHGAVVRADVHVDPSGRPKGSGIVAFESADDARN 267
Query: 166 ALDKLDNAELNGRRIRLIEDKPRG 189
A+ + + + GR + + ED+ G
Sbjct: 268 AIQQFNGYDWQGRTLEVREDRYAG 291
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKK 165
++ D R+ V NLS V W LKDFMRQ GEV +AD + + G+VE+ S +
Sbjct: 93 SQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYASREQAQN 152
Query: 166 ALDKLDNAELNGRRIRLIED---KPRGGGR 192
A+ L N L GR + + ED +PR G+
Sbjct: 153 AVATLSNQTLMGRLVYVREDREAEPRFTGQ 182
>gi|71034173|ref|XP_766728.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353685|gb|EAN34445.1| hypothetical protein TP01_1207 [Theileria parva]
Length = 543
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 32/178 (17%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
TK++IG L V + +L +G I + + F F+++ +DA+ A+ E++ K +
Sbjct: 360 TKIFIGNLSGDVTQEELTSKFSSFGPINRIDFRRKFAFIDYVRSKDAESAIREMHNKFIW 419
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
G + V+ ID++++ S R P P ++ V NL
Sbjct: 420 GSYLKVQ--PHIDQNKK------LSSRDPKP------------------SFQITVSNLDQ 453
Query: 124 RVSWQDLKDFMRQVGEVCYAD-AHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
VSWQDLKDF RQ G+V Y K R G++E+ + ++ A+ ELNG++I
Sbjct: 454 SVSWQDLKDFGRQAGDVHYTSIIIKGDRRFGLIEYTNEESVQNAM-----KELNGKKI 506
>gi|70947849|ref|XP_743501.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56523027|emb|CAH75823.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 283
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 73/154 (47%), Gaps = 29/154 (18%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELN 58
+++Y+G LP V RD+E + +G I +K F F+EFED RDA DA+ E +
Sbjct: 8 SRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKD 67
Query: 59 GKSLLGERVTVEI---AKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR 115
G G ++ VE+ A+ + RGR G R RRG R
Sbjct: 68 GCDFGGNKLRVEVPFNARDNGKYSSRGRGMMG--RGSKSRRG-----------------R 108
Query: 116 LIVE--NLSSRVSWQDLKDFMRQVGEVCYADAHK 147
+VE L SWQDLKD +R+ GE +AD K
Sbjct: 109 YVVEVSGLPLSGSWQDLKDHLREAGECGHADVFK 142
>gi|410919787|ref|XP_003973365.1| PREDICTED: uncharacterized protein LOC101077437 [Takifugu
rubripes]
Length = 1490
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 12/96 (12%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
+ KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+
Sbjct: 11 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELD 70
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G+++ G RV VE++ G RS+ RG PPP
Sbjct: 71 GRTMCGCRVRVELSTGEKRSRSRG---------PPP 97
>gi|149063568|gb|EDM13891.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Rattus
norvegicus]
Length = 124
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 63/120 (52%), Gaps = 25/120 (20%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNG 59
++Y+G LP VRE+DLE YGRIR++ LKN F FV FED RDA+DA+Y NG
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 60 KSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT-RSDHRLIV 118
R+ VE R YG R GW R R GPPT RSD R++V
Sbjct: 75 YDYGQCRLRVEFP-----------RAYGG------RGGW--PRASRNGPPTRRSDFRVLV 115
>gi|84997688|ref|XP_953565.1| hypothetical protein [Theileria annulata]
gi|65304562|emb|CAI72887.1| hypothetical protein, conserved [Theileria annulata]
Length = 732
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 38/181 (20%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
TK++IG L V + +L +G I + + F F+++ +DAD A+ +++ K +
Sbjct: 535 TKIFIGNLSGDVTQEELTDKFSSFGPINRIDFRRKFAFIDYVRSKDADAAIRDMHNKFIW 594
Query: 64 GERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
G + V+ ID+++ S R P P ++ V NL
Sbjct: 595 GSYLKVQ--PHIDQNKR------LSSRDPKPS------------------FQITVSNLDQ 628
Query: 124 RVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKKALDKLDNAELNGRR 179
VSWQDLKDF RQ G+V Y KR G++E+ + ++KA++ ELNG++
Sbjct: 629 SVSWQDLKDFGRQAGDVHYTSIIIKGDKRF---GLIEYTNEQSVQKAMN-----ELNGQK 680
Query: 180 I 180
I
Sbjct: 681 I 681
>gi|6899884|emb|CAB71893.1| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana]
Length = 271
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 27/178 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
V++G Y R+ DLE+ YGR+ V +K+G+ FV FED RDA+DA+ +L+ E
Sbjct: 4 VFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPFGYE 63
Query: 66 --RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R++VE AKG ERG R G +AP + PT++ L V N
Sbjct: 64 KRRLSVEWAKG-----ERG-RPRGDAKAPSNLK------------PTKT---LFVINFDP 102
Query: 124 -RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
R D++ G+V + RN V+FE+ D KAL+ +++ R +
Sbjct: 103 IRTKEHDIEKHFEPYGKVTNV---RIRRNFSFVQFETQEDATKALEATQRSKILDRVV 157
>gi|226293434|gb|EEH48854.1| RNP domain-containing protein [Paracoccidioides brasiliensis Pb18]
Length = 478
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-----KNGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ L+ F++ G + DV+L G G VE+ A +AV L
Sbjct: 101 RVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREQAQNAVATL 160
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLI 117
+ ++L+G V V DR E G S G+ G ++
Sbjct: 161 SNQNLMGRLVYVRE----DREAEPRFTGAPSRGDFGGPGRGGYGGGYGSGSGAGGSRQIY 216
Query: 118 VENLSSRVSWQDLKDFMRQV---GEVCYADAHK----RHRNEGVVEFESSSDMKKALDKL 170
V NL V WQDLKD RQ G V AD H R + G+V FES+ D + A+ +
Sbjct: 217 VSNLPFSVGWQDLKDLFRQAAQQGAVVRADVHVDPSGRPKGSGIVAFESADDARNAIQQF 276
Query: 171 DNAELNGRRIRLIEDKPRG 189
+ + GR + + ED+ G
Sbjct: 277 NGYDWQGRTLEVREDRFAG 295
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKK 165
++ D R+ V NLS V W LKDFMRQ GEV +AD + + G+VE+ + +
Sbjct: 96 SQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREQAQN 155
Query: 166 ALDKLDNAELNGRRIRLIEDK 186
A+ L N L GR + + ED+
Sbjct: 156 AVATLSNQNLMGRLVYVREDR 176
>gi|18412169|ref|NP_567120.1| arginine/serine-rich-splicing factor RSP31 [Arabidopsis thaliana]
gi|26454661|sp|P92964.2|RSP31_ARATH RecName: Full=Arginine/serine-rich-splicing factor RSP31
gi|16612268|gb|AAL27502.1|AF439831_1 AT3g61860/F21F14_30 [Arabidopsis thaliana]
gi|21928093|gb|AAM78075.1| AT3g61860/F21F14_30 [Arabidopsis thaliana]
gi|332646749|gb|AEE80270.1| arginine/serine-rich-splicing factor RSP31 [Arabidopsis thaliana]
Length = 264
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 27/178 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
V++G Y R+ DLE+ YGR+ V +K+G+ FV FED RDA+DA+ +L+ E
Sbjct: 4 VFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPFGYE 63
Query: 66 --RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R++VE AKG ERG R G +AP + PT++ L V N
Sbjct: 64 KRRLSVEWAKG-----ERG-RPRGDAKAPSNLK------------PTKT---LFVINFDP 102
Query: 124 -RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
R D++ G+V + RN V+FE+ D KAL+ +++ R +
Sbjct: 103 IRTKEHDIEKHFEPYGKVTNV---RIRRNFSFVQFETQEDATKALEATQRSKILDRVV 157
>gi|413944556|gb|AFW77205.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 282
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLL 63
TK+Y+G + R +DLE + YGR+R+V +K FGFVEF D RDADDA ++L+G+
Sbjct: 90 TKLYVGQISPYTRTQDLEDIFRKYGRLRNVDMKREFGFVEFTDPRDADDARHDLDGRIFD 149
Query: 64 GERVTVEIAKGIDR 77
G + VE A+G R
Sbjct: 150 GSHLIVEFARGAQR 163
>gi|428170688|gb|EKX39611.1| hypothetical protein GUITHDRAFT_160003 [Guillardia theta CCMP2712]
Length = 182
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 43/199 (21%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKN----------GFGFVEFEDYRDAD 51
+G +VY+G L + + +DL+ ++G + +V+ + G VE+ DA
Sbjct: 10 LGCRVYVGNLSWDAQWQDLKDHMRGPNQNLNVVHADIMYEAGGRSKGCAIVEYASPEDAQ 69
Query: 52 DAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTR 111
A+ ELN ++G + V DR+ G
Sbjct: 70 RAIAELNDTEMMGRLIFVR-----------------------------EDREGFKGGMGT 100
Query: 112 SDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK----RHRNEGVVEFESSSDMKKAL 167
R+ V NLS WQDLKD MR G V +AD R + G+VEF S + +A+
Sbjct: 101 GGRRVYVGNLSWECKWQDLKDHMRTAGNVLHADVMTGPDGRSKGCGLVEFSSPEEAVRAI 160
Query: 168 DKLDNAELNGRRIRLIEDK 186
+L+ EL GR I + ED+
Sbjct: 161 QELNETELMGRMIFVREDR 179
>gi|326476777|gb|EGE00787.1| RNP domain-containing protein [Trichophyton tonsurans CBS 112818]
Length = 436
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 88/202 (43%), Gaps = 31/202 (15%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-KNGFG------FVEFEDYRDADDAVY 55
+VY+G L Y V+ L+ F++ G + DV+L NG VE+ A AV
Sbjct: 51 RVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKVGVIVIVEYATREQAQQAVA 110
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG----WGHDRDDRYGPPTR 111
L+ ++L+G V V DR E G PP+RG P
Sbjct: 111 TLSNQNLMGRLVYVRE----DREAEPRFTG-------PPQRGDFGGGRGGFSGPGSGPGG 159
Query: 112 SDHRLIVENLSSRVSWQDLKDFMRQV---GEVCYADAHK----RHRNEGVVEFESSSDMK 164
++ V NL V WQDLKD RQ G V AD H R + G+V FES D +
Sbjct: 160 GGRQIYVANLPYNVGWQDLKDLFRQATQQGAVVRADVHMDASGRPKGSGIVAFESPDDAR 219
Query: 165 KALDKLDNAELNGRRIRLIEDK 186
A+ + + E GR + + ED+
Sbjct: 220 NAIQQFNGYEWQGRPLEVREDR 241
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEG------VVEFESSSDM 163
++ D R+ V NLS V W LKDFMRQ GEV +AD +VE+ +
Sbjct: 46 SQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKVGVIVIVEYATREQA 105
Query: 164 KKALDKLDNAELNGRRIRLIEDK 186
++A+ L N L GR + + ED+
Sbjct: 106 QQAVATLSNQNLMGRLVYVREDR 128
>gi|281210715|gb|EFA84881.1| RNA-binding region RNP-1 domain-containing protein
[Polysphondylium pallidum PN500]
Length = 542
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIR--DVILKNG--FGFVEFEDYRDADDAVYELNGKS 61
+YIGGL RDL+ YG I+ D+ +G F F+EF++ RDADDA+ LNG
Sbjct: 3 LYIGGLTAETNARDLDNLFSVYGTIQRNDIKKTSGRCFAFIEFKERRDADDALKALNGAK 62
Query: 62 LLGERVTVEIAKG 74
LLG ++TVE +KG
Sbjct: 63 LLGSKITVEWSKG 75
>gi|297821068|ref|XP_002878417.1| arginine/serine-rich splicing factor 31 [Arabidopsis lyrata subsp.
lyrata]
gi|297324255|gb|EFH54676.1| arginine/serine-rich splicing factor 31 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 27/178 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
V++G Y R+ DLE+ YGR+ V +K+G+ FV FED RDA+DA+ +L+ E
Sbjct: 4 VFVGNFEYETRQSDLERLFDKYGRVERVDMKSGYAFVYFEDERDAEDAIRKLDNFPFGYE 63
Query: 66 --RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R++VE AKG ERGR PR G + PT++ L V N
Sbjct: 64 KRRLSVEWAKG-----ERGR----------PR---GDAKATSNLKPTKT---LFVINFDP 102
Query: 124 -RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
R D++ G+V + RN V+FE+ D KAL+ +++ R +
Sbjct: 103 IRTKEHDIEKHFEPYGKVINV---RIRRNFSFVQFETQEDATKALEATQRSKILDRVV 157
>gi|432857012|ref|XP_004068510.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Oryzias latipes]
Length = 182
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
+ KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+
Sbjct: 7 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELD 66
Query: 59 GKSLLGERVTVEIAKGIDRSQERG 82
G++L G RV VE++ G RS+ RG
Sbjct: 67 GRTLCGCRVRVELSNGEKRSRSRG 90
>gi|242089645|ref|XP_002440655.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
gi|241945940|gb|EES19085.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
Length = 241
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 104/253 (41%), Gaps = 65/253 (25%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLG 64
K+Y+G + R +D E YGR+R+V LK FGFVEF D RDADDA ++L+G+ G
Sbjct: 1 KLYVGQISPHTRTQDHEDLFSKYGRLRNVDLKRDFGFVEFSDPRDADDARHDLDGRRFDG 60
Query: 65 ERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS-DHRLIVENLSS 123
+ VE A+G RRG G D GPP + ++
Sbjct: 61 SYIIVEFARGA-------------------RRGPGGVPLDVRGPPFPGRCYNCGMDGWVR 101
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
D +D + GE+ G +E R
Sbjct: 102 DCKADDWRDRCFRCGEL------------GHIE------------------------RNC 125
Query: 184 EDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSKSKAKSVSRSPSP 243
++ P+ RGR S SRS S + R RS SKS SP + + +S SRSPS
Sbjct: 126 KNSPKDLKRGR---SYSRSPSPHHGKGRG------RSYSKSLSPHHGRGRGRSYSRSPSH 176
Query: 244 SKTRKRSRSRSDS 256
+ R RS S S S
Sbjct: 177 CRGRGRSWSYSRS 189
>gi|258568094|ref|XP_002584791.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906237|gb|EEP80638.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 420
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 90/203 (44%), Gaps = 29/203 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIR--DVIL-KNGF------GFVEFEDYRDADDAVY 55
+VY+G L Y V+ L+ F++ G + DV+L NG VE+ A +AV
Sbjct: 51 RVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKVGVNAIVEYATREQAQNAVS 110
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRS--D 113
L+ ++L+G V V DR E G PP R + S
Sbjct: 111 TLSNQNLMGRLVYVRE----DREAEPRFTG-------PPHRDAAGAGRGGFSGGYNSLGS 159
Query: 114 HRLIVENLSSRVSWQDLKDFMRQV---GEVCYADAHK----RHRNEGVVEFESSSDMKKA 166
++ V NL V WQDLKD RQ G V AD H R + G+V FES D + A
Sbjct: 160 RQIYVSNLPFNVGWQDLKDLFRQATQQGTVVRADVHLDPNGRPKGSGIVAFESVEDARNA 219
Query: 167 LDKLDNAELNGRRIRLIEDKPRG 189
+ + + E +GR + + ED+ G
Sbjct: 220 IQQFNGYEWHGRNLEVREDRFAG 242
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA------HKRHRNEGVVEFESSSDM 163
++ D R+ V NLS V W LKDFMRQ GEV +AD + +VE+ +
Sbjct: 46 SQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKVGVNAIVEYATREQA 105
Query: 164 KKALDKLDNAELNGRRIRLIED---KPRGGG 191
+ A+ L N L GR + + ED +PR G
Sbjct: 106 QNAVSTLSNQNLMGRLVYVREDREAEPRFTG 136
>gi|356520256|ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
max]
Length = 259
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 118/277 (42%), Gaps = 50/277 (18%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
++ G L Y R+ +LE+ YGRI V +K+GF FV +ED RDA++A+ L+ E
Sbjct: 4 IFAGNLEYDTRQSELERLFAKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNVPFGHE 63
Query: 66 --RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R++VE A+G ERGR HD PT++ + + + +
Sbjct: 64 KRRLSVEWARG-----ERGRH---------------HDGSKANQKPTKTLFVINFDPIRT 103
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI--- 180
RV +D++ G V + + RN V+FE+ D KAL+ + +++ R +
Sbjct: 104 RV--RDIEKHFEPYGNVLHV---RIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVE 158
Query: 181 -RLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSS----KSRSP-RSRSKSGSPRKSKSKA 234
L +D RG R RS S R S + RSP R G P +S
Sbjct: 159 YALRDDGERGDNYDSPRRRGGYERSPSPYHRRPSPDYGRPRSPVYDRYNGGGPDMRRSPD 218
Query: 235 KSVSRSP--------------SPSKTRKRSRSRSDSR 257
RSP SP R RS SRS R
Sbjct: 219 YGRHRSPDYGRRRSPDYGKPRSPEYGRYRSCSRSPVR 255
>gi|449547249|gb|EMD38217.1| hypothetical protein CERSUDRAFT_82463 [Ceriporiopsis subvermispora
B]
Length = 224
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 114 HRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNA 173
+RLIV +S SWQDLKDF R+ G V YAD + EGV+E+ S D ++A+ +LD
Sbjct: 34 YRLIVSGISRDTSWQDLKDFGREAGSVSYADIDRDVPGEGVLEYLSREDAERAVKELDGR 93
Query: 174 ELNGRRIRLIEDKPRGG 190
+L G+ +R+ D RGG
Sbjct: 94 DLRGQPVRVALDAERGG 110
>gi|326915074|ref|XP_003203846.1| PREDICTED: hypothetical protein LOC100542161 [Meleagris gallopavo]
Length = 273
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
TKVY+G L G + +LE+ YG +R V I +N GF FVEFED RDA+DAV L+GK
Sbjct: 44 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 103
Query: 61 SLLGERVTVEIAKGIDR 77
+ G RV VE++ G+ R
Sbjct: 104 VICGSRVRVEVSTGMPR 120
>gi|237844047|ref|XP_002371321.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211968985|gb|EEB04181.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|221506395|gb|EEE32030.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 351
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+YIG LP ++D+E+ + +G+I + K G+ F+E+ D RDA DA+ +L+G+
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R + I ++ G+G P RG R L V
Sbjct: 77 PPPGMRGAAPLRVEIPLARSSRPDGFGEEALP---RGLAG---------RRGRFVLEVRG 124
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE----GVVEFESSSDMKKALDKLDNAELN 176
L SWQDLKD R +G+V +A+ K G V F S DM +A++ LD +
Sbjct: 125 LPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEVLDGSTFR 184
Query: 177 GR-----RIRLIEDKPRGGGRGRS 195
RI + E + GG GRS
Sbjct: 185 SHEGEKSRISVREKRAPGGRGGRS 208
>gi|432856730|ref|XP_004068509.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 1
[Oryzias latipes]
Length = 166
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
+ KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+
Sbjct: 7 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELD 66
Query: 59 GKSLLGERVTVEIAKGIDRSQERG 82
G++L G RV VE++ G RS+ RG
Sbjct: 67 GRTLCGCRVRVELSNGEKRSRSRG 90
>gi|221485545|gb|EEE23826.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 351
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILK-----NGFGFVEFEDYRDADDAVYELNGK 60
+YIG LP ++D+E+ + +G+I + K G+ F+E+ D RDA DA+ +L+G+
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVEN 120
G R + I ++ G+G P RG R L V
Sbjct: 77 PPPGMRGAAPLRVEIPLARSSRPDGFGEEALP---RGLAG---------RRGRFVLEVRG 124
Query: 121 LSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE----GVVEFESSSDMKKALDKLDNAELN 176
L SWQDLKD R +G+V +A+ K G V F S DM +A++ LD +
Sbjct: 125 LPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEVLDGSTFR 184
Query: 177 GR-----RIRLIEDKPRGGGRGRS 195
RI + E + GG GRS
Sbjct: 185 SHEGEKSRISVREKRAPGGRGGRS 208
>gi|350596827|ref|XP_003128414.2| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
Length = 151
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG 99
+L G RV VE++ G RS+ RG PPP WG
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPP--SWG 97
>gi|296487190|tpg|DAA29303.1| TPA: splicing factor, arginine/serine-rich 3-like [Bos taurus]
Length = 164
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG 99
+L G RV VE++ G RS+ RG PPP WG
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPP--SWG 97
>gi|4506901|ref|NP_003008.1| serine/arginine-rich splicing factor 3 [Homo sapiens]
gi|8567402|ref|NP_038691.1| serine/arginine-rich splicing factor 3 [Mus musculus]
gi|77736345|ref|NP_001029872.1| serine/arginine-rich splicing factor 3 [Bos taurus]
gi|114145746|ref|NP_001041372.1| splicing factor, arginine/serine-rich 3 [Rattus norvegicus]
gi|305855200|ref|NP_001182245.1| serine/arginine-rich splicing factor 3 [Ovis aries]
gi|307078119|ref|NP_001182483.1| splicing factor, arginine/serine-rich 3 [Gallus gallus]
gi|307078159|ref|NP_001182496.1| splicing factor, arginine/serine-rich 3 [Pongo abelii]
gi|350538573|ref|NP_001232578.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|114607174|ref|XP_001173216.1| PREDICTED: uncharacterized protein LOC747921 isoform 5 [Pan
troglodytes]
gi|126309787|ref|XP_001370000.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Monodelphis domestica]
gi|149732155|ref|XP_001499880.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|296198029|ref|XP_002746526.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Callithrix jacchus]
gi|301756971|ref|XP_002914334.1| PREDICTED: splicing factor, arginine/serine-rich 3-like
[Ailuropoda melanoleuca]
gi|326933663|ref|XP_003212920.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Meleagris
gallopavo]
gi|332255653|ref|XP_003276947.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 1
[Nomascus leucogenys]
gi|332255655|ref|XP_003276948.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 2
[Nomascus leucogenys]
gi|332823925|ref|XP_003311314.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|338717417|ref|XP_003363635.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|344263812|ref|XP_003403989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
gi|345778693|ref|XP_532124.3| PREDICTED: serine/arginine-rich splicing factor 3 [Canis lupus
familiaris]
gi|348576314|ref|XP_003473932.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cavia
porcellus]
gi|350586583|ref|XP_003482220.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
gi|395534031|ref|XP_003769052.1| PREDICTED: serine/arginine-rich splicing factor 3 [Sarcophilus
harrisii]
gi|395832270|ref|XP_003789196.1| PREDICTED: serine/arginine-rich splicing factor 3 [Otolemur
garnettii]
gi|397496243|ref|XP_003818951.1| PREDICTED: serine/arginine-rich splicing factor 3 [Pan paniscus]
gi|402866823|ref|XP_003897573.1| PREDICTED: serine/arginine-rich splicing factor 3 [Papio anubis]
gi|403261702|ref|XP_003923252.1| PREDICTED: serine/arginine-rich splicing factor 3 [Saimiri
boliviensis boliviensis]
gi|410040712|ref|XP_003950873.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410040714|ref|XP_003950874.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410959034|ref|XP_003986117.1| PREDICTED: serine/arginine-rich splicing factor 3 [Felis catus]
gi|426352928|ref|XP_004043955.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352930|ref|XP_004043956.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352932|ref|XP_004043957.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352934|ref|XP_004043958.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|441648624|ref|XP_004090899.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648629|ref|XP_004090900.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648632|ref|XP_004090901.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|51338672|sp|P84103.1|SRSF3_HUMAN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|51338673|sp|P84104.1|SRSF3_MOUSE RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Protein X16; AltName: Full=Splicing factor,
arginine/serine-rich 3
gi|122145080|sp|Q3SZR8.1|SRSF3_BOVIN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|5531904|gb|AAD44523.1|AF107405_1 pre-mRNA splicing factor [Homo sapiens]
gi|55440|emb|CAA37821.1| X16 [Mus musculus]
gi|338484|gb|AAA36648.1| pre-mRNA splicing factor [Homo sapiens]
gi|2125863|emb|CAA62844.1| splicing factor [Mus musculus]
gi|12654193|gb|AAH00914.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|12847924|dbj|BAB27762.1| unnamed protein product [Mus musculus]
gi|26347593|dbj|BAC37445.1| unnamed protein product [Mus musculus]
gi|30582873|gb|AAP35663.1| splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|45768791|gb|AAH68111.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|46362469|gb|AAH69018.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|47940164|gb|AAH71196.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|53734444|gb|AAH83316.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|60655009|gb|AAX32068.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|60655011|gb|AAX32069.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|74137380|dbj|BAE22040.1| unnamed protein product [Mus musculus]
gi|74139940|dbj|BAE31808.1| unnamed protein product [Mus musculus]
gi|74179670|dbj|BAE22483.1| unnamed protein product [Mus musculus]
gi|74181349|dbj|BAE29950.1| unnamed protein product [Mus musculus]
gi|74203068|dbj|BAE26230.1| unnamed protein product [Mus musculus]
gi|74216995|dbj|BAE26606.1| unnamed protein product [Mus musculus]
gi|74222015|dbj|BAE26830.1| unnamed protein product [Mus musculus]
gi|74226734|dbj|BAE27015.1| unnamed protein product [Mus musculus]
gi|74354685|gb|AAI02736.1| Splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|90076534|dbj|BAE87947.1| unnamed protein product [Macaca fascicularis]
gi|90080349|dbj|BAE89656.1| unnamed protein product [Macaca fascicularis]
gi|109692284|gb|ABG37970.1| unknown [Rattus norvegicus]
gi|119624306|gb|EAX03901.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|119624308|gb|EAX03903.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|148690659|gb|EDL22606.1| mCG21131, isoform CRA_d [Mus musculus]
gi|149043499|gb|EDL96950.1| rCG61099, isoform CRA_c [Rattus norvegicus]
gi|165875525|gb|ABY68590.1| pre-mRNA splicing factor SRP20-like protein [Ovis aries]
gi|189069112|dbj|BAG35450.1| unnamed protein product [Homo sapiens]
gi|197127497|gb|ACH43995.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|197692159|dbj|BAG70043.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|197692405|dbj|BAG70166.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|261860472|dbj|BAI46758.1| splicing factor, arginine/serine-rich 3 [synthetic construct]
gi|296474519|tpg|DAA16634.1| TPA: splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|349603122|gb|AEP99052.1| Splicing factor, arginine/serine-rich 3-like protein [Equus
caballus]
gi|351701484|gb|EHB04403.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
gi|380815558|gb|AFE79653.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|383420725|gb|AFH33576.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|410221336|gb|JAA07887.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410221338|gb|JAA07888.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410357561|gb|JAA44572.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|417396397|gb|JAA45232.1| Putative serine/arginine-rich splicing factor 3 [Desmodus
rotundus]
gi|431916817|gb|ELK16577.1| Splicing factor, arginine/serine-rich 3 [Pteropus alecto]
Length = 164
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG 99
+L G RV VE++ G RS+ RG PPP WG
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPP--SWG 97
>gi|384948768|gb|AFI37989.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
Length = 164
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG 99
+L G RV VE++ G RS+ RG PPP WG
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPP--SWG 97
>gi|126309365|ref|XP_001367778.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Monodelphis domestica]
Length = 235
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
TKVY+G L G + +LE+ YG +R V I +N GF FVEFED RDA+DAV L+GK
Sbjct: 11 TKVYVGNLETGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVQGLDGK 70
Query: 61 SLLGERVTVEIAKGIDR 77
+ G RV VE++ G+ R
Sbjct: 71 VICGSRVRVELSTGLPR 87
>gi|327271253|ref|XP_003220402.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Anolis
carolinensis]
Length = 164
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG 99
+L G RV VE++ G RS+ RG PPP WG
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPP--SWG 97
>gi|71028102|ref|XP_763694.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350648|gb|EAN31411.1| hypothetical protein, conserved [Theileria parva]
Length = 223
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 91/191 (47%), Gaps = 25/191 (13%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRIR--DVIL-----KNGFGFVEFEDYRDADDAVYEL 57
+VY+G L + VR +DL+ +K G + D+I G G VEF D A A+ EL
Sbjct: 37 RVYVGNLSWKVRWQDLKDHMKQVGDVLRADIIEDYDGKSKGCGIVEFADEDSASRAIAEL 96
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHR-- 115
N +L ++ V DR RGYG + PR D G RS R
Sbjct: 97 NDTMILDRQIFVRE----DRENYNTFRGYGRFFRLRPRI------DSPSGYSGRSSGRSG 146
Query: 116 --LIVENLSSRVSWQDLKDFMRQVGEVCYADA--HKRHRNEGV--VEFESSSDMKKALDK 169
+IV NL + SW++LKD + G V AD H+ R++GV V F + +KA+
Sbjct: 147 TSVIVTNLQWKTSWKELKDLFKSCGLVLRADVLTHEDGRSKGVGKVVFANEYSARKAITM 206
Query: 170 LDNAELNGRRI 180
++ L+GR+I
Sbjct: 207 YNDYVLDGRKI 217
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 115 RLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRH----RNEGVVEFESSSDMKKALDKL 170
R+ V NLS +V WQDLKD M+QVG+V AD + + + G+VEF +A+ +L
Sbjct: 37 RVYVGNLSWKVRWQDLKDHMKQVGDVLRADIIEDYDGKSKGCGIVEFADEDSASRAIAEL 96
Query: 171 DNAELNGRRIRLIEDKP-----RGGGR 192
++ + R+I + ED+ RG GR
Sbjct: 97 NDTMILDRQIFVREDRENYNTFRGYGR 123
>gi|300681317|emb|CAZ96031.1| arginine/serine-rich splicing factor [Sorghum bicolor]
Length = 324
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 111/241 (46%), Gaps = 35/241 (14%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
V+ G L Y VR ++E+ YGR+ V LK GF FV ED RDA+DA++ L+G
Sbjct: 28 VFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLDGI 87
Query: 61 SL--LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G R+ VE K DR+ GRRG S R+P R PT++ +
Sbjct: 88 DFGRKGRRIRVEWTK-EDRTA--GRRG-SSRRSPTQAR------------PTKTLFVINF 131
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
+ +++R+ +DL+ + G V K N V+FE D +AL+ + + R
Sbjct: 132 DPINTRI--RDLERHFDKYGRVANVRIKK---NFAFVQFEVQEDATRALEGTNGSHFMDR 186
Query: 179 RIRL---IEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKS-GSPRKSKSKA 234
I + + D G RG S R R +S R RS SP R + GSP +SK
Sbjct: 187 VISVEYALRDDDEKGERGNGYSPDRRGRERSPGRRRSP---SPYGRGRERGSPDYGRSKE 243
Query: 235 K 235
+
Sbjct: 244 R 244
>gi|30584291|gb|AAP36394.1| Homo sapiens splicing factor, arginine/serine-rich 3 [synthetic
construct]
gi|61371593|gb|AAX43696.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|61371598|gb|AAX43697.1| splicing factor arginine/serine-rich 3 [synthetic construct]
Length = 165
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG 99
+L G RV VE++ G RS+ RG PPP WG
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPP--SWG 97
>gi|320169407|gb|EFW46306.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 200
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNG----FGFVEFEDYRDADDAVYELNGKS 61
++IG L R RDLE + YGR+ +K G FGFVEFED RDA+DA+ NG++
Sbjct: 3 LFIGRLDRDTRVRDLEDIFQPYGRLVRCDIKGGAVYSFGFVEFEDRRDAEDALNRENGRN 62
Query: 62 LLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPT 110
+ G R+ VE AKG +RS + +R P GH D PPT
Sbjct: 63 VRGVRIAVEWAKGQNRSAD----SDSCFRCNKP----GHWAKDCPNPPT 103
>gi|392333750|ref|XP_003752989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
gi|392354119|ref|XP_003751684.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
Length = 147
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG 99
+L G RV VE++ G RS+ RG PPP WG
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPP--SWG 97
>gi|401397011|ref|XP_003879960.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
gi|325114368|emb|CBZ49925.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
Length = 378
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 39 FGFVEFEDYRDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGW 98
+ FVEFE R A+DAV +G G + VE R R G P G
Sbjct: 6 YAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPSR---RAGSGVNPNTIPTGSFGG 62
Query: 99 GHDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFE 158
G GPP R+ HR++V L WQ LKD MR+ G V +A+ + R GVVE+E
Sbjct: 63 GS-----AGPPRRTGHRVLVSFLPPGCRWQHLKDHMRKAGPVGFAEVLSQGR--GVVEYE 115
Query: 159 SSSDMKKALDKLDNAEL 175
D++ A+ LD EL
Sbjct: 116 HPEDLQYAVRSLDKTEL 132
>gi|1707366|emb|CAA67798.1| splicing factor [Arabidopsis thaliana]
Length = 264
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 27/178 (15%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
V++G Y R+ DLE+ YGR+ V +K+G+ FV FED RDA+DA+ +L+ E
Sbjct: 4 VFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPFGYE 63
Query: 66 --RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
+++VE AKG ERG R G +AP + PT++ L V N
Sbjct: 64 KRKLSVEWAKG-----ERG-RPRGDAKAPSNLK------------PTKT---LFVINFDP 102
Query: 124 -RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI 180
R D++ G+V + RN V+FE+ D KAL+ +++ R +
Sbjct: 103 IRTKEHDIEKHFEPYGKVTNV---RIRRNFSFVQFETQEDATKALEATQRSKILDRVV 157
>gi|430813550|emb|CCJ29111.1| unnamed protein product, partial [Pneumocystis jirovecii]
gi|430814149|emb|CCJ28585.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 299
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVI-LKNGF----GFVEFEDYRDADDAVYEL 57
+VYIG L Y V+ L+ F+K G + DV+ L NG G E+ +A +A+ L
Sbjct: 97 RVYIGNLSYDVKWHHLKDFMKQAGEVIFADVLMLPNGMSKGCGVAEYATRDEAQNAINTL 156
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPP--RRGWGHDRDDRYGPPTRSDH- 114
+ ++L+G V V DR QE + PPP R +G D G S +
Sbjct: 157 SNQTLMGRMVYVRE----DREQEP------RFGGPPPGVPRSYGGYPGDTRGSSYNSSNG 206
Query: 115 -RLIVENLSSRVSWQDLKDFMR--------------QVGEVCYADAHK----RHRNEGVV 155
+L V+NL V WQD+KD R + G V D H R + G+V
Sbjct: 207 RQLFVQNLPYNVGWQDIKDLFRSAGMLFQYLPYNSYKTGNVIRTDIHLTPDGRPKGTGIV 266
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
FE+ + + A + + GR I + ED+
Sbjct: 267 LFETVEEARNAQATFNGYDWQGRIIEVREDR 297
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKK 165
++ D R+ + NLS V W LKDFM+Q GEV +AD + + GV E+ + + +
Sbjct: 92 SQQDRRVYIGNLSYDVKWHHLKDFMKQAGEVIFADVLMLPNGMSKGCGVAEYATRDEAQN 151
Query: 166 ALDKLDNAELNGRRIRLIEDK---PRGGG 191
A++ L N L GR + + ED+ PR GG
Sbjct: 152 AINTLSNQTLMGRMVYVREDREQEPRFGG 180
>gi|403419131|emb|CCM05831.1| predicted protein [Fibroporia radiculosa]
Length = 564
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 31/209 (14%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVILK-----NGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ RDL +F++G G + +V++ G G VEF DA ++ EL
Sbjct: 173 RVYVGNLSYDVKYRDLMEFMRGAGEVLFAEVLITPTGVSKGCGIVEFASQEDAQRSIREL 232
Query: 58 NGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAP----PPRRGWG--------HDRDDR 105
+ ++LLG V + R +G+ P G G +
Sbjct: 233 SEQALLGRPVFI-------REDRENESRFGATPVPGKIGMAMAGQGLHAAPPPRPPHHNY 285
Query: 106 YGPP-TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYAD----AHKRHRNEGVVEFESS 160
+G + ++L V NL + WQDLKD R G + AD A R + G V FE++
Sbjct: 286 FGHQGSNPGNQLYVGNLPYQAGWQDLKDLFRSAGNIIRADINIGADGRPKGSGTVIFETA 345
Query: 161 SDMKKALDKLDNAELNGRRIRLIEDKPRG 189
D ++A+ + + GR + + ED+ G
Sbjct: 346 KDAQQAIGMYNGFDWYGRTLEVREDRYAG 374
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKR----HRNEGVV 155
H+ + ++ ++R+ V NLS V ++DL +FMR GEV +A+ + G+V
Sbjct: 158 HEEAVEFAKVSKRENRVYVGNLSYDVKYRDLMEFMRGAGEVLFAEVLITPTGVSKGCGIV 217
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRLIEDK 186
EF S D ++++ +L L GR + + ED+
Sbjct: 218 EFASQEDAQRSIRELSEQALLGRPVFIREDR 248
>gi|116784190|gb|ABK23251.1| unknown [Picea sitchensis]
Length = 299
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 119/272 (43%), Gaps = 47/272 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
+Y G + Y VR+ ++E+ YGR+ V +K+G+ F+ ED RDA+DA+ L+ +
Sbjct: 4 LYCGNIEYAVRQIEIERLFGRYGRVDRVDMKSGYAFIYMEDERDAEDAIRGLDNTDFGRQ 63
Query: 66 --RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R+TVE K DR R G R D PT++ + + S+
Sbjct: 64 RRRLTVEWTKHADRGFRRFEDG---------------RRSDAGLNPTKTLFVINFDPYST 108
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLI 183
+V +DL+ G++ Y + RN V++ES D KAL+ +++ R I +
Sbjct: 109 KV--RDLERHFEPYGKLIYV---RIRRNFAFVQYESQEDATKALESTHMSKMLDRVITVE 163
Query: 184 ----EDKPRGGGRGRSRSSSSRSR-----SKSRSRSRSSKSRSPRSRSKSGSP------- 227
ED R GG SS +SR + R R RS+ R R R GSP
Sbjct: 164 YAQGEDSDRRGG----YSSPIQSRRYGKAADVRDRDRSASPRYGR-RPVRGSPDYGRARS 218
Query: 228 ----RKSKSKAKSVSRSPSPSKTRKRSRSRSD 255
R S+ + R+PSP R R D
Sbjct: 219 PIYARSSERHSHDYGRAPSPIYARHPERHSHD 250
>gi|149025036|gb|EDL81403.1| splicing factor, arginine/serine-rich 5, isoform CRA_d [Rattus
norvegicus]
Length = 142
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
MRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I+LIE
Sbjct: 1 MRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE 51
>gi|119601414|gb|EAW81008.1| splicing factor, arginine/serine-rich 5, isoform CRA_d [Homo
sapiens]
Length = 144
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
MRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I+LIE
Sbjct: 1 MRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE 51
>gi|28193160|emb|CAD62322.1| unnamed protein product [Homo sapiens]
gi|119601410|gb|EAW81004.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Homo
sapiens]
gi|119601413|gb|EAW81007.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Homo
sapiens]
gi|119601415|gb|EAW81009.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Homo
sapiens]
Length = 145
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 134 MRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIE 184
MRQ GEV +ADAH+ NEGVVEF S D+K A++KL E+NGR+I+LIE
Sbjct: 1 MRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE 51
>gi|395533733|ref|XP_003768907.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Sarcophilus harrisii]
Length = 235
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
TKVY+G L G + +LE+ YG +R V I +N GF FVEFED RDA+DAV L+GK
Sbjct: 11 TKVYVGNLETGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVQGLDGK 70
Query: 61 SLLGERVTVEIAKGIDR 77
+ G RV VE++ G+ R
Sbjct: 71 VICGSRVRVELSTGLPR 87
>gi|134075427|emb|CAK47988.1| unnamed protein product [Aspergillus niger]
Length = 336
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 90/206 (43%), Gaps = 21/206 (10%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-KNGF------GFVEFEDYRDADDAVY 55
+VY+G L Y V+ L+ F++ G + DV+L NG VE+ A +AV
Sbjct: 108 RVYVGNLSYDVKWHHLKDFMRQAGEVIFADVLLLPNGMSKVGANAIVEYATREQAQNAVN 167
Query: 56 ELNGKSLLGERVTVEIAKGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDH 114
L+ ++L+G V V DR E R G RG
Sbjct: 168 TLSNQNLMGRLVYVRE----DREPEPRFTGGPSRGDFGGGGRGGFGGGFGGPAGGGAGGR 223
Query: 115 RLIVENLSSRVSWQDLKDFMRQV---GEVCYADAHK----RHRNEGVVEFESSSDMKKAL 167
+L V NL V WQDLKD RQ G V AD H R + G+V FES D + A+
Sbjct: 224 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPEDARNAI 283
Query: 168 DKLDNAELNGRRIRLIEDKPRGGGRG 193
+ + + GR++ + ED+ G G G
Sbjct: 284 QQFNGYDWQGRQLEVREDRFAGAGPG 309
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA------HKRHRNEGVVEFESSSDM 163
++ D R+ V NLS V W LKDFMRQ GEV +AD + +VE+ +
Sbjct: 103 SQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVIFADVLLLPNGMSKVGANAIVEYATREQA 162
Query: 164 KKALDKLDNAELNGRRIRLIEDK 186
+ A++ L N L GR + + ED+
Sbjct: 163 QNAVNTLSNQNLMGRLVYVREDR 185
>gi|354484028|ref|XP_003504193.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Cricetulus griseus]
gi|344255990|gb|EGW12094.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 164
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 57/99 (57%), Gaps = 14/99 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE YG +R V + +N GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELEHAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG 99
+L G RV VE++ G RS+ RG PPP WG
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPP--SWG 97
>gi|255645349|gb|ACU23171.1| unknown [Glycine max]
Length = 259
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 117/274 (42%), Gaps = 50/274 (18%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
++ G L Y R+ +LE+ YGRI V +K+GF FV +ED RDA++A+ L+ E
Sbjct: 4 IFAGNLEYDTRQSELERLFAKYGRIDRVDMKSGFAFVFYEDERDAEEAIRALDNVPFGHE 63
Query: 66 --RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R++VE A+G ERGR HD PT++ + + + +
Sbjct: 64 KRRLSVEWARG-----ERGRH---------------HDGSKANQKPTKTLFVINFDPIRT 103
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRI--- 180
RV +D++ G V + + RN V+FE+ D KAL+ + +++ R +
Sbjct: 104 RV--RDIEKHFEPYGNVLHV---RIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVE 158
Query: 181 -RLIEDKPRGGGRGRSRSSSSRSRSKSRSRSRSS----KSRSP-RSRSKSGSPRKSKSKA 234
L +D RG R RS S R S + RSP R G P +S
Sbjct: 159 YALRDDGERGDNYDSPRRRGGYERSPSPYHRRPSPDYGRPRSPVYDRYNGGGPDMRRSPD 218
Query: 235 KSVSRSP--------------SPSKTRKRSRSRS 254
RSP SP R RS SRS
Sbjct: 219 YGRHRSPDYGRRRSPDYGKPRSPEYGRYRSCSRS 252
>gi|225706912|gb|ACO09302.1| Splicing factor, arginine/serine-rich 7 [Osmerus mordax]
Length = 208
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L G + +LE+ YG +R V + +N GF FVE+ED RDA+DAV ++GK
Sbjct: 15 CKVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDTRDAEDAVKGMDGK 74
Query: 61 SLLGERVTVEIAKGIDRSQERGR 83
L G R+ VE++ G+ R GR
Sbjct: 75 VLCGARIRVELSTGMSRKSRYGR 97
>gi|221221358|gb|ACM09340.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 12/96 (12%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
+ KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+
Sbjct: 12 LDCKVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELD 71
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPP 94
G++L G RV VE++ G R++ RG PPP
Sbjct: 72 GRTLSGSRVRVELSNGEKRTRNRG---------PPP 98
>gi|149422794|ref|XP_001506905.1| PREDICTED: serine/arginine-rich splicing factor 7-like, partial
[Ornithorhynchus anatinus]
Length = 228
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
TKVY+G L G + +LE+ YG +R V I +N GF FVEFED RDA+DAV L+GK
Sbjct: 1 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 60
Query: 61 SLLGERVTVEIAKGIDR 77
+ G RV VE++ G+ R
Sbjct: 61 VICGSRVRVELSTGMPR 77
>gi|300681351|emb|CAZ96098.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 315
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 111/241 (46%), Gaps = 35/241 (14%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKN-----GFGFVEFEDYRDADDAVYELNGK 60
V+ G L Y VR ++E+ YGR+ V LK GF FV ED RDA+DA++ L+G
Sbjct: 28 VFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLDGI 87
Query: 61 SL--LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIV 118
G R+ VE K DR+ GRRG S R+P R PT++ +
Sbjct: 88 DFGRKGRRIRVEWTKE-DRTV--GRRG-SSRRSPTNAR------------PTKTLFVINF 131
Query: 119 ENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGR 178
+ +++R+ +DL+ + G V K N V+FE D +AL+ + + R
Sbjct: 132 DPINTRI--RDLERHFDKYGRVANVRIKK---NFAFVQFEVQEDATRALEGTNGSHFMDR 186
Query: 179 RIRL---IEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKS-GSPRKSKSKA 234
I + + D G RG S R R +S R RS SP R + GSP +SK
Sbjct: 187 VISVEYALRDDDEKGERGNGYSPDRRGRERSPGRRRSP---SPYGRGRERGSPDYGRSKE 243
Query: 235 K 235
+
Sbjct: 244 R 244
>gi|417396073|gb|JAA45070.1| Putative splicing factor arginine/serine-rich 3 isoform cra c
[Desmodus rotundus]
Length = 135
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 12/97 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
+L G RV VE++ G RS+ RG PPP G
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPPSWG 97
>gi|356559961|ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
max]
Length = 264
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 109/250 (43%), Gaps = 43/250 (17%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSLLGE 65
++ G L Y R+ +LE+ YGRI V +K+GF FV +ED RDA++A+ L+ E
Sbjct: 4 IFAGNLEYDTRQSELERLFSKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNVPFGHE 63
Query: 66 --RVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R++VE A+G ERGR GS PT++ + + + +
Sbjct: 64 KRRLSVEWARG-----ERGRHRDGSKAN---------------QKPTKTLFVINFDPIRT 103
Query: 124 RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRL- 182
RV +D++ G V + + RN V+FE+ D KA++ + +++ R + +
Sbjct: 104 RV--RDIEKHFEPYGNVLHV---RIRRNFAFVQFETQEDATKAIECTNMSKILDRVVSVE 158
Query: 183 -----------IEDKPRGGGRGRSRSSSSRSRSKSRSRSRSSKSRSPRSRSKSGSPRKSK 231
D PR GG RS S R S R RS R G P + +
Sbjct: 159 YALRDDGERGDNYDSPRRGGYERSPSPYHRRPSPDYGRPRSPVY----DRYNGGGPDRRR 214
Query: 232 SKAKSVSRSP 241
S RSP
Sbjct: 215 SPDYGRHRSP 224
>gi|67465896|ref|XP_649106.1| enhancer binding protein-2 [Entamoeba histolytica HM-1:IMSS]
gi|56465462|gb|EAL43716.1| enhancer binding protein-2, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704892|gb|EMD45051.1| enhancer binding protein, putative [Entamoeba histolytica KU27]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 33/209 (15%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVILK------NGFGFVEFEDYRDADDAVYEL 57
TK+YIG L Y E +L+ + +G+I++ L GF FVE+E DA AV
Sbjct: 2 TKLYIGNLSYKTTEENLKTHFESFGKIKEAKLMIFRGYSRGFAFVEYETEEDAKKAV-AA 60
Query: 58 NGKSLLGERVTVEIA------KGIDRSQER---GRRGY---GSYRAPPPRRGWG------ 99
NG G ++ VEIA K + +++ G RGY R+ +G
Sbjct: 61 NGVEFEGRKLKVEIARPPKERKEVPEGEKKTTAGPRGYRPRRFGPRRFTRKHFGKKTNGS 120
Query: 100 --HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE----- 152
+ ++ + P SD+ + V+NL+ + +DLK+ ++ V HR
Sbjct: 121 RVNKKEKKEVPTEFSDNLIFVKNLAYAIKDEDLKEIFKEFNVVSAKVVTYNHRGNVRSKG 180
Query: 153 -GVVEFESSSDMKKALDKLDNAELNGRRI 180
G VE +S+ D K A++KL+ R I
Sbjct: 181 YGFVEVKSAEDQKAAVEKLNGTTQKERAI 209
>gi|449271649|gb|EMC81933.1| Splicing factor, arginine/serine-rich 3 [Columba livia]
Length = 156
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 12/97 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDVIL---KNGFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
+L G RV VE++ G RS+ RG PPP G
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPPSWG 97
>gi|317029025|ref|XP_003188692.1| RNP domain protein [Aspergillus niger CBS 513.88]
Length = 428
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 87/197 (44%), Gaps = 19/197 (9%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-----KNGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ L+ F++ G + DV+L G G VE+ A +AV L
Sbjct: 52 RVYVGNLSYDVKWHHLKDFMRQAGEVIFADVLLLPNGMSKGCGIVEYATREQAQNAVNTL 111
Query: 58 NGKSLLGERVTVEIAKGIDRSQE-RGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRL 116
+ ++L+G V V DR E R G RG +L
Sbjct: 112 SNQNLMGRLVYVRE----DREPEPRFTGGPSRGDFGGGGRGGFGGGFGGPAGGGAGGRQL 167
Query: 117 IVENLSSRVSWQDLKDFMRQV---GEVCYADAHK----RHRNEGVVEFESSSDMKKALDK 169
V NL V WQDLKD RQ G V AD H R + G+V FES D + A+ +
Sbjct: 168 YVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPEDARNAIQQ 227
Query: 170 LDNAELNGRRIRLIEDK 186
+ + GR++ + ED+
Sbjct: 228 FNGYDWQGRQLEVREDR 244
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 110 TRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKK 165
++ D R+ V NLS V W LKDFMRQ GEV +AD + + G+VE+ + +
Sbjct: 47 SQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVIFADVLLLPNGMSKGCGIVEYATREQAQN 106
Query: 166 ALDKLDNAELNGRRIRLIEDK 186
A++ L N L GR + + ED+
Sbjct: 107 AVNTLSNQNLMGRLVYVREDR 127
>gi|126274640|ref|XP_001388006.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213876|gb|EAZ63983.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 271
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 3 GTKVYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL 62
G KV++ L + V LE G I DV++ GF ++ FE+ DA A+ N
Sbjct: 5 GVKVFVRPLSFEVEREQLESHFGTAGPIADVLILRGFAYITFENSEDATRAIETFNATEF 64
Query: 63 LGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLS 122
G+++ VE A+ +R ++ TR +R+ + NL
Sbjct: 65 DGQQLQVETAR--ERPED-----------------------------TRGKYRVKITNLP 93
Query: 123 SRVSWQDLKDFMRQVG--EVCYADAHKRHRN---EGVVEFESSSDMKKALDKLDNAELNG 177
+WQDLKDF+R+ + +A ++ + + G +EF S+ ++++A+ LD AE
Sbjct: 94 DNAAWQDLKDFVREKTGYQGLFAKINRDYESGEVSGSLEFASAEELERAIPLLDKAEFQD 153
Query: 178 RRIRLIED 185
I ED
Sbjct: 154 AVIGAEED 161
>gi|12844972|dbj|BAB26569.1| unnamed protein product [Mus musculus]
Length = 164
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 12/97 (12%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRG 97
+L G RV VE++ G RS+ RG PPP G
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPPSWG 97
>gi|432092851|gb|ELK25217.1| Serine/arginine-rich splicing factor 9 [Myotis davidii]
Length = 199
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 62/128 (48%), Gaps = 20/128 (15%)
Query: 48 RDADDAVYELNGKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYG 107
RDA+DAVY NG R+ VE + R G R PP R
Sbjct: 41 RDAEDAVYGRNGYDYGQCRLRVEFPRAYGGRGGWPRGG----RNGPPTR----------- 85
Query: 108 PPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKAL 167
RSD R++V L SWQDLKD MR+ G+VCYAD K G+VE+ DM+ AL
Sbjct: 86 ---RSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYAL 140
Query: 168 DKLDNAEL 175
KLD+ +
Sbjct: 141 RKLDDTKF 148
>gi|403217420|emb|CCK71914.1| hypothetical protein KNAG_0I01230 [Kazachstania naganishii CBS
8797]
Length = 486
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 41/207 (19%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRI--RDVIL----KNGFGFVEFEDYRDADDAVYELNG 59
V++G L + DL +F + G I D+I G G VEF + D D+A+ +++G
Sbjct: 112 VFVGNLSFDCSVDDLREFFQPIGEIVSTDIITSGGRHKGMGTVEFTNTADVDEAIRQMDG 171
Query: 60 KSLLGERVTVE------------IAKGIDRSQERGRRGYGSYRA--------PPPRRGWG 99
+G + V+ + G+ E RGY PPP G
Sbjct: 172 VMFMGREIFVKQDHPPPSQSARPLDVGMGYEGEEMDRGYPRPPPRQRRLEKRPPP----G 227
Query: 100 HDRDDRYGPPTRSDHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHKRHRNE----GVV 155
DR P IV NL ++WQ+LKD R+ G+V AD +R G V
Sbjct: 228 GDR------PMEGYEAFIV-NLPYAITWQNLKDMFREAGDVSRADVELDYRGLSRGFGSV 280
Query: 156 EFESSSDMKKALDKLDNAELNGRRIRL 182
F DM +A+D + L+GR + +
Sbjct: 281 YFPIKEDMYRAIDMFNGYNLDGRILEV 307
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 113 DHRLIVENLSSRVSWQDLKDFMRQVGEVCYADAHK---RHRNEGVVEFESSSDMKKALDK 169
D+ + V NLS S DL++F + +GE+ D RH+ G VEF +++D+ +A+ +
Sbjct: 109 DNSVFVGNLSFDCSVDDLREFFQPIGEIVSTDIITSGGRHKGMGTVEFTNTADVDEAIRQ 168
Query: 170 LDNAELNGRRIRLIEDKP 187
+D GR I + +D P
Sbjct: 169 MDGVMFMGREIFVKQDHP 186
>gi|209147621|gb|ACI32898.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 120
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 19/118 (16%)
Query: 2 VGTKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELN 58
+ KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+
Sbjct: 12 LDCKVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELD 71
Query: 59 GKSLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG-HDRDDRYG----PPTR 111
G++L G RV VE++ G R++ RG PPP W RDD G PP R
Sbjct: 72 GRTLSGSRVRVELSNGEKRTRNRG---------PPP--SWSRRPRDDHRGRRGSPPAR 118
>gi|15226019|ref|NP_182184.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4415941|gb|AAD20171.1| putative arginine/serine-rich splicing factor [Arabidopsis
thaliana]
gi|17529006|gb|AAL38713.1| putative arginine/serine-rich splicing factor [Arabidopsis
thaliana]
gi|24030496|gb|AAN41395.1| putative arginine/serine-rich splicing factor [Arabidopsis
thaliana]
gi|222423842|dbj|BAH19886.1| AT2G46610 [Arabidopsis thaliana]
gi|330255634|gb|AEC10728.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 250
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 6 VYIGGLPYGVRERDLEKFVKGYGRIRDVILKNGFGFVEFEDYRDADDAVYELNGKSL-LG 64
VY+G Y R DLE+ +GR++ V +K+G+ FV FED RDA+DA+ + + G
Sbjct: 4 VYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTFGYG 63
Query: 65 ER-VTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRLIVENLSS 123
R ++VE AK D ERG+ PR G PT++ L V N
Sbjct: 64 RRKLSVEWAK--DFQGERGK----------PRDGKAVSNQR----PTKT---LFVINFDP 104
Query: 124 -RVSWQDLKDFMRQVGEVCYADAHKRHRNEGVVEFESSSDMKKALDKLDNAEL 175
R +D++ G+V + RN V+F + D KALD N++L
Sbjct: 105 IRTRERDMERHFEPYGKVLNV---RMRRNFAFVQFATQEDATKALDSTHNSKL 154
>gi|5441529|emb|CAB46819.1| splicing factor [Canis lupus familiaris]
Length = 133
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
Query: 4 TKVYIGGLPYGVRERDLEKFVKGYGRIRDV-ILKN--GFGFVEFEDYRDADDAVYELNGK 60
KVY+G L + +LE+ YG +R V + +N GF FVEFED RDA DAV EL+G+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 61 SLLGERVTVEIAKGIDRSQERGRRGYGSYRAPPPRRGWG 99
+L G RV VE++ G RS+ RG PPP WG
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRG---------PPP--SWG 97
>gi|452004844|gb|EMD97300.1| hypothetical protein COCHEDRAFT_1164036 [Cochliobolus
heterostrophus C5]
Length = 475
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 5 KVYIGGLPYGVRERDLEKFVKGYGRI--RDVIL-----KNGFGFVEFEDYRDADDAVYEL 57
+VY+G L Y V+ L+ F++ G + DV+L G G VE+ A +AV L
Sbjct: 97 RVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREQAQNAVATL 156
Query: 58 NGKSLLGERVTV-EIAKGIDRSQERGRRGYGSYRAPPPRRGWGHDRDDRYGPPTRSDHRL 116
+ ++L+G V V E + R G RG G + G PT + ++
Sbjct: 157 SNQNLMGRLVYVREDREAEPRFSAPGGRGDFGGGMGRGGYGGFGGNNAAAGGPTGA-RQV 215
Query: 117 IVENLSSRVSWQDLKDFMRQV---GEVCYADAH----KRHRNEGVVEFESSSDMKKALDK 169
V NL V WQDLKD RQ G+V AD H R + GVV FE+ D + A+ +
Sbjct: 216 YVSNLPYNVGWQDLKDLFRQAANNGQVLRADVHIAPDGRPKGSGVVAFETPEDARNAITQ 275
Query: 170 LDNAELNGRRIRLIEDK 186
+ + GR + + ED+
Sbjct: 276 FNGYDWQGRNLEVREDR 292
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 77 RSQERGRRGYGSYRAPPPRRGWGHDRDDRYGP-------PTRSDHRLIVENLSSRVSWQD 129
RS G +G GSY++ RG + G ++ D R+ V NLS V W
Sbjct: 52 RSPNSGAQGAGSYQSYGASRGGSSRPTENKGEMMQNIRDSSQQDRRVYVGNLSYDVKWHH 111
Query: 130 LKDFMRQVGEVCYADA----HKRHRNEGVVEFESSSDMKKALDKLDNAELNGRRIRLIED 185
LKDFMRQ GEV +AD + + G+VE+ + + A+ L N L GR + + ED
Sbjct: 112 LKDFMRQAGEVLFADVLLLPNGMSKGCGIVEYATREQAQNAVATLSNQNLMGRLVYVRED 171
Query: 186 K 186
+
Sbjct: 172 R 172
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,119,461,401
Number of Sequences: 23463169
Number of extensions: 179359744
Number of successful extensions: 1656112
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13016
Number of HSP's successfully gapped in prelim test: 18709
Number of HSP's that attempted gapping in prelim test: 1124617
Number of HSP's gapped (non-prelim): 254321
length of query: 262
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 122
effective length of database: 9,074,351,707
effective search space: 1107070908254
effective search space used: 1107070908254
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 75 (33.5 bits)