BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10322
(261 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|322796740|gb|EFZ19173.1| hypothetical protein SINV_12036 [Solenopsis invicta]
Length = 237
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/251 (51%), Positives = 161/251 (64%), Gaps = 45/251 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
FSPYSDNGG+ VA+AG D+ +IA+DTRLS G++IYTREQ KLF + + +
Sbjct: 26 FSPYSDNGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFSLSNTTILGCSGCWCDT 85
Query: 74 FTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
T+T L QMY HEH K MST + A+M+SIM+Y KRFFPYY S I+AGLD GKGC+
Sbjct: 86 LTLTRLLSARMQMYKHEHQKEMSTPAAAQMLSIMLYHKRFFPYYVSNILAGLDENGKGCI 145
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
YSYDPIGH E+ +RAGGS+GALLQ LLDNQ+
Sbjct: 146 YSYDPIGHCEKTTYRAGGSAGALLQPLLDNQI---------------------------- 177
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
G++NQE V TPV EKA++++KD FT+AAERDIYTGDG+ + ITKDG
Sbjct: 178 -----------GYKNQEGVTPTPVTQEKAVAILKDVFTSAAERDIYTGDGITIKIITKDG 226
Query: 251 IKEYNFPLRKD 261
IK+ +F LRKD
Sbjct: 227 IKDSSFALRKD 237
>gi|357605013|gb|EHJ64427.1| proteasome subunit beta 1 [Danaus plexippus]
Length = 232
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/254 (49%), Positives = 161/254 (63%), Gaps = 45/254 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNF 70
Q F PY+DNGG+ VA+AG DYA+I +DTRLS G++IYTREQ KLF D T +
Sbjct: 18 QVRFEPYADNGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSDRTVLGATGCW 77
Query: 71 LMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
T+T L QMY HEHNK MST ++A+M+S M+Y KRFFPYY S ++AGLD EGK
Sbjct: 78 CDTLTLTRLLQARMQMYEHEHNKAMSTPAVAQMLSTMLYYKRFFPYYISNVLAGLDAEGK 137
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
GCVYSYDPIGH ER+N+RAGGS+GA LQ LLDNQ+G+
Sbjct: 138 GCVYSYDPIGHCERSNYRAGGSAGAQLQPLLDNQIGL----------------------- 174
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
+N +NV + P+ EKA++++KD F +AAERDIYTGD +++ IT
Sbjct: 175 ----------------KNMQNVTEAPLSREKALALLKDVFISAAERDIYTGDSIYILIIT 218
Query: 248 KDGIKEYNFPLRKD 261
+GI+E F LRKD
Sbjct: 219 ANGIQEEKFELRKD 232
>gi|427787323|gb|JAA59113.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Rhipicephalus pulchellus]
Length = 232
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/256 (50%), Positives = 162/256 (63%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P Q HF+PYS+NGG+ VAVAG D+A+IASD+RLS+GY+I+TREQSKLF + T
Sbjct: 16 PKQAHFNPYSENGGSIVAVAGDDFAVIASDSRLSSGYHIHTREQSKLFKLSNQCVLGSTG 75
Query: 69 NFLMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ I T T +MYLHEH+K+MST ++A++I M+Y KRFFPYY S I+AGLD E
Sbjct: 76 CWCDILTFTRFLEARMKMYLHEHHKLMSTPAVAQLIVTMLYNKRFFPYYISNILAGLDEE 135
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKGC+Y YDP+GH+ER +RAGGSS ALLQ LLDNQ+
Sbjct: 136 GKGCIYCYDPVGHSERVQYRAGGSSSALLQPLLDNQI----------------------- 172
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N ENV P E+A++++KD F +AAERDIYTGD V +
Sbjct: 173 ----------------GFKNMENVKPEPPTRERAVNIIKDVFISAAERDIYTGDSVIIHI 216
Query: 246 ITKDGIKEYNFPLRKD 261
I KDGIKE PLR+D
Sbjct: 217 IDKDGIKEDKMPLRRD 232
>gi|211939905|gb|ACJ13433.1| proteasome subunit beta 1 [Helicoverpa armigera]
Length = 232
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/254 (49%), Positives = 161/254 (63%), Gaps = 45/254 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNF 70
Q F PY+DNGG+ VA+AG D+A+I +DTRLS G++IYTREQ KLF D T +
Sbjct: 18 QVRFEPYADNGGSIVAIAGDDFAVIGADTRLSTGFSIYTREQKKLFKLSDKTVLGATGCW 77
Query: 71 LMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
T+T L QMY HEHNK MST ++A+M+S M+Y KRFFPYY S ++AGLD +GK
Sbjct: 78 CDTLTLTRLLSARMQMYEHEHNKSMSTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDADGK 137
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
GCVYSYDPIGH ER+N+RAGGS+GA LQ LLDNQ+G+
Sbjct: 138 GCVYSYDPIGHCERSNYRAGGSAGAQLQPLLDNQIGL----------------------- 174
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
+N +NV + P+P EKA++++KD F +AAERDIYTGD +++ IT
Sbjct: 175 ----------------KNMQNVTEAPIPKEKALALLKDVFISAAERDIYTGDCIYILIIT 218
Query: 248 KDGIKEYNFPLRKD 261
GI+E F LRKD
Sbjct: 219 ASGIQEEKFELRKD 232
>gi|389609037|dbj|BAM18130.1| proteasome 26kD subunit [Papilio xuthus]
Length = 232
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 161/254 (63%), Gaps = 45/254 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNF 70
Q F PY+DNGG+ VA+AG DYA+I +DTRLS G++IYTREQ KLF + T +
Sbjct: 18 QVRFEPYADNGGSVVAIAGEDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCW 77
Query: 71 LMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
T+T L QMY HEHNK M+T ++A+M+S M+Y KRFFPYY S I+AGLD +GK
Sbjct: 78 CDTLTLTRLLQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDADGK 137
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
GC+YSYDPIGH ER+ +RAGGS+GA LQ LLDNQ+G+
Sbjct: 138 GCIYSYDPIGHCERSTYRAGGSAGAQLQPLLDNQIGL----------------------- 174
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
+N +NV + PVP EKA++++KD F +AAERDIYTGD +++ IT
Sbjct: 175 ----------------KNMQNVSEAPVPKEKALALLKDVFISAAERDIYTGDCIYIIIIT 218
Query: 248 KDGIKEYNFPLRKD 261
+GI+E F LRKD
Sbjct: 219 ANGIQEEKFELRKD 232
>gi|389611001|dbj|BAM19111.1| proteasome 26kD subunit [Papilio polytes]
Length = 232
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 161/254 (63%), Gaps = 45/254 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNF 70
Q F PY+DNGG+ VA+AG DYA+I +DTRLS G++IYTREQ KLF + T +
Sbjct: 18 QVRFEPYADNGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCW 77
Query: 71 LMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
T+T L QMY HEHNK M+T ++A+M+S M+Y KRFFPYY S I+AGLD +GK
Sbjct: 78 CDTLTLTRLLQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDADGK 137
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
GC+YSYDPIGH ER+ +RAGGS+GA LQ LLDNQ+G+
Sbjct: 138 GCIYSYDPIGHCERSTYRAGGSAGAQLQPLLDNQIGL----------------------- 174
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
+N +NV + PVP EKA++++KD F +AAERDIYTGD +++ IT
Sbjct: 175 ----------------KNMQNVTEAPVPKEKALALLKDVFISAAERDIYTGDCIYIIIIT 218
Query: 248 KDGIKEYNFPLRKD 261
+GI+E F LRKD
Sbjct: 219 ANGIQEEKFELRKD 232
>gi|91092850|ref|XP_968855.1| PREDICTED: similar to proteasome beta subunit [Tribolium castaneum]
gi|270003046|gb|EEZ99493.1| hypothetical protein TcasGA2_TC000069 [Tribolium castaneum]
Length = 235
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 125/256 (48%), Positives = 163/256 (63%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P QHHFSPY+DNGG+ VA+AG D+ +I +DTRLSAG++IYTR+Q+KLF D +
Sbjct: 19 PTQHHFSPYADNGGSVVAIAGDDFVVIGADTRLSAGFSIYTRDQNKLFRLSDTTVLGCSG 78
Query: 69 NFLMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ T+T IL QMY EHNK M+T + A+M+S M+Y KRFFPYY S I+ GLD E
Sbjct: 79 CWCDTLTLTRILSARMQMYQQEHNKTMATPACAQMLSTMLYYKRFFPYYISNILVGLDNE 138
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKGC+YSYDPIGH E+ +RAGGS+GALLQ LLDNQ+G+
Sbjct: 139 GKGCIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGL--------------------- 177
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
+N +NV + + LE+A +++KD F +AAERDI+TGD + +
Sbjct: 178 ------------------KNMQNVKDSKLTLERAAAIIKDVFISAAERDIFTGDNILINI 219
Query: 246 ITKDGIKEYNFPLRKD 261
ITKDGIKE +F LRKD
Sbjct: 220 ITKDGIKEDSFQLRKD 235
>gi|151301141|ref|NP_001093092.1| proteasome beta subunit [Bombyx mori]
gi|95102764|gb|ABF51323.1| proteasome beta subunit [Bombyx mori]
Length = 232
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 159/254 (62%), Gaps = 45/254 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNF 70
QH F PY+DNGG+ VA+AG DYA+I +DTRLS G++IYTR+Q KLF + T +
Sbjct: 18 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 77
Query: 71 LMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
T+T L QMY HEHNK M+T ++A+M+S M+Y KRFFPYY S ++AGLD +GK
Sbjct: 78 CDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGK 137
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
GCVYSYDPIGH R NFRAGGS+ A LQ LLDNQ+G+
Sbjct: 138 GCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGL----------------------- 174
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
+N +NV + P+P EKA++++KD F +AAERDIYTGD +++ IT
Sbjct: 175 ----------------KNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILIIT 218
Query: 248 KDGIKEYNFPLRKD 261
GI+E F LRKD
Sbjct: 219 ASGIQEEKFELRKD 232
>gi|307170452|gb|EFN62722.1| Proteasome subunit beta type-1 [Camponotus floridanus]
Length = 236
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/257 (49%), Positives = 160/257 (62%), Gaps = 57/257 (22%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI--- 73
FSPYSDNGG+ VA+AG D+ +IA+DTRLS G++IYTREQ KLF P N ++
Sbjct: 25 FSPYSDNGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLF------PLSNTTILGCS 78
Query: 74 ------FTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
T+T L QMY HEH K M+T + A+M+SIM+Y KRFFPYY S I+AGLD
Sbjct: 79 GCWCDTLTLTRLLSARMQMYKHEHQKEMTTPAAAQMLSIMLYHKRFFPYYVSNILAGLDE 138
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
GKGC+YSYDPIGH E+ +RAGGS+GALLQ LLDNQ+
Sbjct: 139 NGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQI---------------------- 176
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
G++NQE V + EKA++++KD FT+AAERDIYTGDG+ +
Sbjct: 177 -----------------GYKNQEGVTPAVLTQEKAVAILKDVFTSAAERDIYTGDGISIK 219
Query: 245 AITKDGIKEYNFPLRKD 261
ITKDGIK+ +F LRKD
Sbjct: 220 IITKDGIKDSSFALRKD 236
>gi|156547425|ref|XP_001605493.1| PREDICTED: proteasome subunit beta type-1-like isoform 1 [Nasonia
vitripennis]
gi|345484470|ref|XP_003425047.1| PREDICTED: proteasome subunit beta type-1-like isoform 2 [Nasonia
vitripennis]
Length = 236
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/258 (48%), Positives = 165/258 (63%), Gaps = 45/258 (17%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRP 66
+ P Q HFSPY+DNGG+ VA+AG D+++IA+D+RLSAG++IYTR+Q KLF +
Sbjct: 18 QVPRQQHFSPYADNGGSVVALAGDDFSLIAADSRLSAGFSIYTRKQQKLFTLSETSVLGC 77
Query: 67 TYNFLMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
+ + I T+T + QMY HEH+K MST + A+M+S M+Y KRFFPYY + I+AGLD
Sbjct: 78 SGCWCDILTLTRVMAARMQMYKHEHHKTMSTPAAAQMLSTMLYYKRFFPYYINNILAGLD 137
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHD 183
EGKG +Y YDP+GH E+ + AGGS+GALLQ LLDNQV
Sbjct: 138 EEGKGVIYRYDPVGHCEKNTYVAGGSAGALLQPLLDNQV--------------------- 176
Query: 184 LALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHL 243
G+ NQENV+K P+ EKA+S+VKD F +AAERDIYTGDG+++
Sbjct: 177 ------------------GYLNQENVEKIPLTKEKALSIVKDVFISAAERDIYTGDGINI 218
Query: 244 CAITKDGIKEYNFPLRKD 261
ITKDGI + F LR+D
Sbjct: 219 KIITKDGIVDETFDLRRD 236
>gi|346472379|gb|AEO36034.1| hypothetical protein [Amblyomma maculatum]
Length = 232
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/256 (47%), Positives = 160/256 (62%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P Q +FSPYS+NGG+ VA+AG D+A+IASD+RLS GY+IYTREQSKLF + T
Sbjct: 16 PKQAYFSPYSENGGSIVAIAGEDFAVIASDSRLSTGYSIYTREQSKLFKLSNQCVLGSTG 75
Query: 69 NFLMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ I T T +MYLHEH+++MST ++A+++ M+Y KRFFPYY S I+AGLD +
Sbjct: 76 CWCDILTFTRFLEARMKMYLHEHHRLMSTPAVAQLVVTMLYNKRFFPYYISNILAGLDED 135
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKGC+Y YDP+GH ER +RAGGSS ALLQ LLDNQ+
Sbjct: 136 GKGCIYCYDPVGHCERVQYRAGGSSSALLQPLLDNQI----------------------- 172
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N ENV+ P E+A++++KD F ++AERDIYTGD V +
Sbjct: 173 ----------------GFKNMENVELVPPTRERAVNIIKDVFISSAERDIYTGDSVVINI 216
Query: 246 ITKDGIKEYNFPLRKD 261
I K+GIKE LR+D
Sbjct: 217 IDKNGIKEEMLALRRD 232
>gi|121543861|gb|ABM55595.1| putative proteasome subunit, beta type, 1 [Maconellicoccus
hirsutus]
Length = 229
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/251 (50%), Positives = 154/251 (61%), Gaps = 45/251 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF-----DHYYYRPTYNFL 71
F+PY DNGG+ VAV G D+ IIASDTRLS GY+IYTR QSK+F ++ +
Sbjct: 18 FNPYDDNGGSIVAVGGDDFVIIASDTRLSTGYSIYTRHQSKIFKLSKISALACAGCWSDV 77
Query: 72 MIFTITI-LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
+ FT I QMYLHEHNK MST +LA+M+S MMY KRFFPYY S I+ GL+ +G G +
Sbjct: 78 LTFTRLINARMQMYLHEHNKEMSTPALAQMLSTMMYHKRFFPYYVSNILGGLEKDGSGWI 137
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
YSYDPIG+ ER+ FRAGGSSGALLQ LLDNQ
Sbjct: 138 YSYDPIGNMERSKFRAGGSSGALLQPLLDNQ----------------------------- 168
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
LGF N ENV+ + LEKA++VV+D F +AAERDIYTGD +H+ ITKD
Sbjct: 169 ----------LGFANMENVESRSISLEKALAVVRDVFISAAERDIYTGDKIHVTVITKDE 218
Query: 251 IKEYNFPLRKD 261
IKE L KD
Sbjct: 219 IKEDTLQLTKD 229
>gi|332019508|gb|EGI59987.1| Proteasome subunit beta type-1 [Acromyrmex echinatior]
Length = 237
Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 125/252 (49%), Positives = 158/252 (62%), Gaps = 45/252 (17%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLM 72
+F+PYSDNGG+ VA+AG D+ +IA+DTRLS G+ I+TR Q KLF D + +
Sbjct: 25 NFNPYSDNGGSVVALAGDDFCVIAADTRLSTGFTIHTRNQDKLFPLSDTTILGCSGCWCD 84
Query: 73 IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
T+T L QMY HEH K MST + A+M+SIM+Y KRFFPYY S I+AGLD GKGC
Sbjct: 85 TTTLTRLLSARMQMYKHEHQKEMSTPATAQMLSIMLYHKRFFPYYVSNILAGLDENGKGC 144
Query: 130 VYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
+YSYDPIGH E+ +RAGGS+GALLQ LLDNQ+
Sbjct: 145 IYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQI--------------------------- 177
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
G++NQE V P+ EKAI+++KD FT+AAERDIYTGDG+ + ITKD
Sbjct: 178 ------------GYKNQEGVTPAPLTQEKAIAILKDVFTSAAERDIYTGDGITIKIITKD 225
Query: 250 GIKEYNFPLRKD 261
GI+ +F LRKD
Sbjct: 226 GIEISSFALRKD 237
>gi|442749997|gb|JAA67158.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Ixodes ricinus]
Length = 232
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 156/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P Q +FSPYSDNGG+ VA+AG D+ +IASD+RLSAGY+IYTR+QSKLF D
Sbjct: 16 PKQCYFSPYSDNGGSIVAIAGEDFVVIASDSRLSAGYHIYTRDQSKLFKLSDKCILGSGG 75
Query: 69 NFLMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ I T T +MYLHEH+K MST ++A++I M+Y KRFFPYY S I+AGLD E
Sbjct: 76 CWCDILTFTRFLEARMKMYLHEHHKPMSTPAVAQLIVTMLYHKRFFPYYISNILAGLDEE 135
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKGC+YSYDP+GH ER +R+GGS ALLQ LLD+Q+
Sbjct: 136 GKGCIYSYDPVGHCERVQYRSGGSGSALLQPLLDSQI----------------------- 172
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+NQ P E+AIS++KD F +AAERD+YTGD V +
Sbjct: 173 ----------------GFKNQVGAVAVPPTRERAISIIKDVFISAAERDMYTGDSVIVNI 216
Query: 246 ITKDGIKEYNFPLRKD 261
I KDG+ E FPLR+D
Sbjct: 217 IDKDGVHEERFPLRRD 232
>gi|350396993|ref|XP_003484732.1| PREDICTED: proteasome subunit beta type-1-like [Bombus impatiens]
Length = 236
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 155/251 (61%), Gaps = 45/251 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
FSPY+DNGG+ +A+AG D+ +IA+DTRLS G++IYTREQ KLF + +
Sbjct: 25 FSPYADNGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCDT 84
Query: 74 FTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
T+T L QMY HEH K M T ++A+M+S M+Y KRFFPYY S I+ GLD +GKGCV
Sbjct: 85 LTLTRLLSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLDEDGKGCV 144
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
YSYDPIGH E +RAGGS+GALLQ LLDNQ+
Sbjct: 145 YSYDPIGHCEVTKYRAGGSAGALLQPLLDNQI---------------------------- 176
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
G++NQE V+ P+ EKA++++KD F +AAERDIYTGD + + ITKDG
Sbjct: 177 -----------GYKNQEGVEPIPLTQEKAVAIIKDVFISAAERDIYTGDSISIKIITKDG 225
Query: 251 IKEYNFPLRKD 261
I++ F LRKD
Sbjct: 226 IQDSTFELRKD 236
>gi|340716619|ref|XP_003396794.1| PREDICTED: proteasome subunit beta type-1-like [Bombus terrestris]
Length = 236
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 155/251 (61%), Gaps = 45/251 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
FSPY+DNGG+ +A+AG D+ +IA+DTRLS G++IYTREQ KLF + +
Sbjct: 25 FSPYADNGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCDT 84
Query: 74 FTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
T+T L QMY HEH K M T ++A+M+S M+Y KRFFPYY S I+ GLD +GKGCV
Sbjct: 85 LTLTRLLSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLDEDGKGCV 144
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
YSYDPIGH E +RAGGS+GALLQ LLDNQ+
Sbjct: 145 YSYDPIGHCEVTKYRAGGSAGALLQPLLDNQI---------------------------- 176
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
G++NQE V+ P+ EKA++++KD F +AAERDIYTGD + + ITKDG
Sbjct: 177 -----------GYKNQEGVEPVPLTQEKAVAIIKDVFISAAERDIYTGDSISIKIITKDG 225
Query: 251 IKEYNFPLRKD 261
I++ F LRKD
Sbjct: 226 IQDSTFELRKD 236
>gi|307214019|gb|EFN89226.1| Proteasome subunit beta type-1 [Harpegnathos saltator]
Length = 236
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 124/253 (49%), Positives = 160/253 (63%), Gaps = 49/253 (19%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
FSPY+DNGG+ VA+AG D+ ++A+DTRLS G++IYTR+Q KLF + +
Sbjct: 25 FSPYADNGGSVVALAGDDFCVVAADTRLSTGFSIYTRQQDKLFPLSKTTILGCSGCWCDT 84
Query: 74 FTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
T+T L QMY HEH K MST + A+M+S M+Y KRFFPYY S I+AGLD GKGC+
Sbjct: 85 LTLTRLLSARMQMYKHEHQKEMSTPATAQMLSTMLYYKRFFPYYVSNILAGLDENGKGCI 144
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
YSYDPIGH E+ +RAGGS+GALLQ LLDNQ+
Sbjct: 145 YSYDPIGHCEKTTYRAGGSAGALLQPLLDNQI---------------------------- 176
Query: 191 NALSSKLTILLGFRNQENVDKTPVPL--EKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
G++NQE + TPV L EKA++++KD FT+AAERDIYTGDG+ + ITK
Sbjct: 177 -----------GYKNQEGI--TPVNLTQEKAVAILKDVFTSAAERDIYTGDGITIKIITK 223
Query: 249 DGIKEYNFPLRKD 261
DGI++ +F LRKD
Sbjct: 224 DGIQDISFALRKD 236
>gi|383853088|ref|XP_003702056.1| PREDICTED: proteasome subunit beta type-1-like [Megachile
rotundata]
Length = 236
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 160/259 (61%), Gaps = 57/259 (22%)
Query: 15 HHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF 74
F+PY+DNGG+ +A+AG D+ +IA+DTRLS G++IYTREQ KLF P + ++
Sbjct: 23 QSFNPYADNGGSVIALAGDDFCVIAADTRLSVGFSIYTREQQKLF------PLSSKTVLG 76
Query: 75 -------TITILPF-----QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
T+T+ F QMY HEH K M+T ++A+M+S M+Y +RFFPYY S II GL
Sbjct: 77 CSGCWCDTLTLTRFLSARMQMYEHEHQKEMATPAVAQMLSTMLYYRRFFPYYISNIIGGL 136
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D +G GCVYSYDPIGH E A +RAGGS+GALLQ LLDNQ+
Sbjct: 137 DDKGHGCVYSYDPIGHCEAAKYRAGGSAGALLQPLLDNQI-------------------- 176
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
G++NQE V+ P+ EKAI+V+KD F +AAERDIYTGD +
Sbjct: 177 -------------------GYKNQEGVEPVPLTQEKAIAVIKDVFISAAERDIYTGDSIS 217
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ ITKDGIK+ +F LRKD
Sbjct: 218 IKIITKDGIKDESFELRKD 236
>gi|66512107|ref|XP_395163.2| PREDICTED: proteasome subunit beta type-1 [Apis mellifera]
Length = 236
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/253 (47%), Positives = 157/253 (62%), Gaps = 45/253 (17%)
Query: 15 HHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFL 71
+F+PY+DNGG+ +A+AG ++ +IA+DTRLS G++IYTREQ KLF + +
Sbjct: 23 RNFNPYADNGGSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLFPLSSKTVLGCSGCWC 82
Query: 72 MIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
T+T IL QMY HEH K M T ++A+M+S M+Y KRFFPYY S I+ GLD GKG
Sbjct: 83 DTLTLTRILSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDENGKG 142
Query: 129 CVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
CVYSYDPIGH E +RAGGS+GALLQ LLDNQ+
Sbjct: 143 CVYSYDPIGHCEITKYRAGGSAGALLQPLLDNQI-------------------------- 176
Query: 189 EINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
G++NQE V+ P+ E+A++++KD FT+AAERDIYTGD + + IT
Sbjct: 177 -------------GYKNQEGVESVPLTQERAVAIIKDVFTSAAERDIYTGDSIFIKIITS 223
Query: 249 DGIKEYNFPLRKD 261
DGI+ +NF LRKD
Sbjct: 224 DGIQNFNFALRKD 236
>gi|242023933|ref|XP_002432385.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212517808|gb|EEB19647.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 219
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P + F Y+DNGG+ VA+AG D+A+I SDTRLS+ Y+I+TR QSKLF D +
Sbjct: 3 PKETPFEFYTDNGGSIVAIAGEDFAVIGSDTRLSSNYSIFTRNQSKLFKLSDTTVLGCSG 62
Query: 69 NF---LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + + QMY H++NKVM T ++++M+S ++Y KRF PY ++AGLD +
Sbjct: 63 CWCDTLQLTKVVRAQMQMYFHDNNKVMVTPAVSQMLSTLLYYKRFMPYLVYNVLAGLDDQ 122
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKGCVYSYDPIGH ER+ FRAGGSSGALLQ LLDNQ
Sbjct: 123 GKGCVYSYDPIGHCERSTFRAGGSSGALLQPLLDNQ------------------------ 158
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
LG+ N ENV K + LEKA+SV+KD F AAAERDIYTGD + +
Sbjct: 159 ---------------LGYHNMENVKKEQLTLEKALSVLKDVFIAAAERDIYTGDSIAIYV 203
Query: 246 ITKDGIKEYNFPLRKD 261
I KDGIK NF LRKD
Sbjct: 204 IKKDGIKSENFDLRKD 219
>gi|350539311|ref|NP_001232140.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129774|gb|ACH46272.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129776|gb|ACH46274.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129778|gb|ACH46276.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129780|gb|ACH46278.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129781|gb|ACH46279.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129782|gb|ACH46280.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129783|gb|ACH46281.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/265 (44%), Positives = 157/265 (59%), Gaps = 56/265 (21%)
Query: 9 LETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
LE P+QHH FSPY+ NGGT +A+AG D+ I+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 18 LEAPVQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKC-----YKLT 72
Query: 68 Y-----------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY
Sbjct: 73 ERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 132
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
II GLD EGKG VYS+DP+G ER NF+AGGS+ A+LQ LLDNQ+
Sbjct: 133 NIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQI-------------- 178
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
GF+N +NV+ P+ LEKA+ +VKD F +AAERD+Y
Sbjct: 179 -------------------------GFKNMQNVEHVPLTLEKALQLVKDVFISAAERDVY 213
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
TGD + +C +TKDGIKE LRKD
Sbjct: 214 TGDALKICIVTKDGIKEQTIQLRKD 238
>gi|197129784|gb|ACH46282.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/265 (44%), Positives = 157/265 (59%), Gaps = 56/265 (21%)
Query: 9 LETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
LE P+QHH FSPY+ NGGT +A+AG D+ I+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 18 LEAPVQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKC-----YKLT 72
Query: 68 Y-----------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY
Sbjct: 73 ERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 132
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
II GLD EGKG VYS+DP+G ER NF+AGGS+ A+LQ LLDNQ+
Sbjct: 133 NIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQI-------------- 178
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
GF+N +NV+ P+ LEKA+ +VKD F +AAERD+Y
Sbjct: 179 -------------------------GFKNMQNVEHVPLTLEKALQLVKDVFISAAERDVY 213
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
TGD + +C +TKDGIKE LRKD
Sbjct: 214 TGDALKICIVTKDGIKEQTIQLRKD 238
>gi|197129773|gb|ACH46271.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/265 (44%), Positives = 157/265 (59%), Gaps = 56/265 (21%)
Query: 9 LETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
LE P+QHH FSPY+ NGGT +A+AG D+ I+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 18 LEAPVQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKC-----YKLT 72
Query: 68 Y-----------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY
Sbjct: 73 ERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 132
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
II GLD EGKG VYS+DP+G ER NF+AGGS+ A+LQ LLDNQ+
Sbjct: 133 NIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQI-------------- 178
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
GF+N +NV+ P+ LEKA+ +VKD F +AAERD+Y
Sbjct: 179 -------------------------GFKNMQNVEHVPLTLEKALQLVKDVFISAAERDVY 213
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
TGD + +C +TKDGIKE LRKD
Sbjct: 214 TGDALKICIVTKDGIKEQTIQLRKD 238
>gi|321473024|gb|EFX83992.1| hypothetical protein DAPPUDRAFT_230628 [Daphnia pulex]
Length = 230
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/254 (49%), Positives = 160/254 (62%), Gaps = 45/254 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYY-----YRPTY 68
QHH+SPY+DNGGT VAVAG D+AIIASDTRL GY+I +REQ+KLF +
Sbjct: 16 QHHWSPYTDNGGTIVAVAGEDFAIIASDTRLIQGYSILSREQTKLFKLSEQTVLGVSGCW 75
Query: 69 NFLMIFTITI-LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
++ FT T+ +MYLHEH K MST ++A+++S M+Y KRFFPYY S I+AGLD +GK
Sbjct: 76 CDVLTFTRTLEARMKMYLHEHLKPMSTPAVAQLVSTMLYHKRFFPYYVSNIVAGLDQDGK 135
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G +YSYDP+GH E+ +RAGG++GA+LQ LLDNQVG+ K MK L
Sbjct: 136 GTLYSYDPVGHCEKNRYRAGGAAGAMLQPLLDNQVGL-----KNMKGEL----------- 179
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
N+ K EKA+ V+KD+F +AAERD TGDGV + IT
Sbjct: 180 ------------------LPNITK-----EKALMVIKDSFISAAERDTSTGDGVIINIIT 216
Query: 248 KDGIKEYNFPLRKD 261
K GI+ +FPLRKD
Sbjct: 217 KAGIEVMHFPLRKD 230
>gi|410912074|ref|XP_003969515.1| PREDICTED: proteasome subunit beta type-1-B-like [Takifugu
rubripes]
Length = 237
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 155/261 (59%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHRFSPYAFNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK MS+ ++A M+S ++YG+RFFPYY II
Sbjct: 76 LGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N ENV + P+ EKAI +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMENVQQVPLSQEKAIQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C ITK+GIKE PLRKD
Sbjct: 217 LRICIITKEGIKEQTIPLRKD 237
>gi|390364342|ref|XP_001187732.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 229
Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/260 (46%), Positives = 156/260 (60%), Gaps = 61/260 (23%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
Q F+PY+ NGGT +A+AG DYAIIASDTRLS G++I+TR+ K YR L +
Sbjct: 19 QQRFNPYTFNGGTIMAMAGDDYAIIASDTRLSEGFSIHTRDSPK-----NYR-----LXV 68
Query: 74 FTITILP------------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+I I +MY HEH+K MSTT++A M+S ++Y +RFFPYYT I+AG
Sbjct: 69 ISIHICSDWPSLTKVLTARLKMYEHEHHKKMSTTAIAAMLSTILYYRRFFPYYTYNILAG 128
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
LD EGKGCVYS+DP+G ER +RA GSS ALLQ LLDNQ+
Sbjct: 129 LDEEGKGCVYSFDPVGSYERETYRAAGSSSALLQPLLDNQI------------------- 169
Query: 182 HDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGV 241
G +NQE K P+P++KA+++VKD F +AAERDIYTGDG+
Sbjct: 170 --------------------GGKNQEGWVKEPIPVDKAVALVKDVFISAAERDIYTGDGI 209
Query: 242 HLCAITKDGIKEYNFPLRKD 261
L +TKDG KE FPLR+D
Sbjct: 210 VLHVLTKDGCKEERFPLRRD 229
>gi|157119738|ref|XP_001659482.1| proteasome subunit beta type [Aedes aegypti]
gi|108875198|gb|EAT39423.1| AAEL008770-PA [Aedes aegypti]
Length = 231
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/254 (46%), Positives = 153/254 (60%), Gaps = 45/254 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNF 70
Q F PY NGG+ VA+AG D+A+I +DTRLS+GY+I+TR Q+KLF D T +
Sbjct: 17 QVQFYPYESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRMSDRTVLASTGCW 76
Query: 71 LMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+T L QMY +H K M+T ++A+M+SI+MY +RFFPYY S ++AGLD +GK
Sbjct: 77 CDTLALTSLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDADGK 136
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G +YSYDPIGH E+ +RAGGS+G LLQ +LDNQ+G+
Sbjct: 137 GVIYSYDPIGHCEKTTYRAGGSAGPLLQPVLDNQIGL----------------------- 173
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
+N NV TPV L+KAIS++KD F +A ERDIYTGD V + IT
Sbjct: 174 ----------------KNMVNVAPTPVQLDKAISIIKDTFISATERDIYTGDSVIINIIT 217
Query: 248 KDGIKEYNFPLRKD 261
KDGIKE LRKD
Sbjct: 218 KDGIKEEIVQLRKD 231
>gi|209734840|gb|ACI68289.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 154/261 (59%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPYS NGGT +AVAG D+A++ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHRFSPYSFNGGTVLAVAGEDFAVVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 IGCSGFHGDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V P+ EKA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMEGVQHLPLSQEKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C +TKDGIKE FPLRKD
Sbjct: 217 LRICIVTKDGIKEETFPLRKD 237
>gi|380018248|ref|XP_003693045.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Apis florea]
Length = 237
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/254 (46%), Positives = 156/254 (61%), Gaps = 46/254 (18%)
Query: 15 HHFSPYSDNGGTTV-AVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNF 70
+F+PY+DNGG +V A+AG ++ +IA+DTRLS G++IYTREQ KL + +
Sbjct: 23 RNFNPYADNGGKSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLXPLSSKTVLGCSGCW 82
Query: 71 LMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
T+T IL QMY HEH K M T ++A+M+S M+Y KRFFPYY S I+ GLD GK
Sbjct: 83 CDTLTLTRILSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDENGK 142
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
GCVYSYDPIGH E +RAGGS+GALLQ LLDNQ+
Sbjct: 143 GCVYSYDPIGHCEITKYRAGGSAGALLQPLLDNQI------------------------- 177
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
G++NQE V+ P+ E+A++++KD FT+AAERDIYTGD + + IT
Sbjct: 178 --------------GYKNQEGVEPVPLTQERAVAIIKDVFTSAAERDIYTGDSIFIKIIT 223
Query: 248 KDGIKEYNFPLRKD 261
DGI+ ++F LRKD
Sbjct: 224 SDGIQNFSFALRKD 237
>gi|197129775|gb|ACH46273.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/265 (44%), Positives = 157/265 (59%), Gaps = 56/265 (21%)
Query: 9 LETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
LE P+QHH FSPY+ NGGT +A+AG D+ I+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 18 LEAPVQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKC-----YKLT 72
Query: 68 Y-----------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
+ L + I +MY H + K M+T ++A M+S ++Y +RFFPYY
Sbjct: 73 ERTVIGCTGFHGDCLTLTKIIEAGGEMYKHSNFKTMTTGAIAAMLSTILYSRRFFPYYVY 132
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
II GLD EGKG VYS+DP+G ER NF+AGGS+ A+LQ LLDNQ+
Sbjct: 133 NIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQI-------------- 178
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
GF+N +NV+ P+ LEKA+ +VKD F +AAERD+Y
Sbjct: 179 -------------------------GFKNMQNVEHVPLTLEKALQLVKDVFISAAERDVY 213
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
TGD + +C +TKDGIKE + LRKD
Sbjct: 214 TGDALKICIVTKDGIKEQSIQLRKD 238
>gi|72537676|gb|AAZ73764.1| 20S proteasome beta subunit [Cirrhinus molitorella]
Length = 237
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 157/261 (60%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHKFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 LGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EG+G VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N ENV++ P+ LEKA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMENVEEVPLTLEKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C ITK+GI+E PLRKD
Sbjct: 217 LEICIITKEGIREEIVPLRKD 237
>gi|195441689|ref|XP_002068635.1| GK20318 [Drosophila willistoni]
gi|194164720|gb|EDW79621.1| GK20318 [Drosophila willistoni]
Length = 233
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/259 (47%), Positives = 160/259 (61%), Gaps = 50/259 (19%)
Query: 13 IQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
+QHH FSPY NGG+ VA+AG D+A+IA+DTRLS+GYNI+TR Q+KLF ++ T
Sbjct: 15 VQHHDFSPYESNGGSIVAIAGEDFAVIAADTRLSSGYNIHTRTQNKLFKLSENSVLGSTG 74
Query: 69 NFLMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ ++T L QMY H H KVMST +LA+M+SI MY +RFFPYY S I+AG+D +
Sbjct: 75 CWSDTLSLTGLLKVRMQMYEHTHLKVMSTDALAQMLSITMYNRRFFPYYVSNILAGVDKD 134
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYSYDPIGH ERA +RAGG++G LLQ +LDNQ+
Sbjct: 135 GKGVVYSYDPIGHCERATYRAGGTAGPLLQPVLDNQI----------------------- 171
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVP---LEKAISVVKDAFTAAAERDIYTGDGVH 242
G++NQ N+ + +P +++A++V D F +AAERDIYTGD V
Sbjct: 172 ----------------GYKNQ-NLSQDELPKLSIDRAVAVAFDTFISAAERDIYTGDSVI 214
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ ITKD IK PLRKD
Sbjct: 215 INIITKDEIKSQELPLRKD 233
>gi|158293754|ref|XP_315096.4| AGAP004991-PA [Anopheles gambiae str. PEST]
gi|157016597|gb|EAA10482.4| AGAP004991-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/252 (46%), Positives = 149/252 (59%), Gaps = 45/252 (17%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLM 72
F PY NGG+ VA+AG D+A+I +DTRLS+GY+I+TR Q+KLF D T +
Sbjct: 19 QFYPYESNGGSVVAIAGEDFAVIGADTRLSSGYSIHTRTQNKLFRLSDKTVLASTGCWCD 78
Query: 73 IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
+T L QMY +H K MST ++A+M+SI+MY +RFFPYY S ++AGLD +GKG
Sbjct: 79 TLALTSLVKVRMQMYKDQHQKNMSTPAVAQMLSILMYNRRFFPYYVSNVLAGLDQDGKGV 138
Query: 130 VYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
VYSYDPIGH E +RAGGS+G LLQ +LDNQ+
Sbjct: 139 VYSYDPIGHCEMTTYRAGGSAGPLLQPVLDNQI--------------------------- 171
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
G +N N D PV +EKAIS++KD F +A ERDIYTGD V + ITKD
Sbjct: 172 ------------GQKNMLNADPEPVKMEKAISIIKDTFISATERDIYTGDSVIINIITKD 219
Query: 250 GIKEYNFPLRKD 261
GIKE LRKD
Sbjct: 220 GIKEETLHLRKD 231
>gi|225716016|gb|ACO13854.1| Proteasome subunit beta type-1-A [Esox lucius]
Length = 237
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 154/261 (59%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPYS NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 IGCSGFHGDCLTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EG+G VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V P+ EKA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMEGVQHLPLSQEKALQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C +TKDGIKE N PLRKD
Sbjct: 217 LRICIVTKDGIKEENVPLRKD 237
>gi|225705074|gb|ACO08383.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 153/261 (58%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPYS NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 IGCSGFHGDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V P+ EKA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMEGVQHLPLSQEKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C +TKDGIKE PLRKD
Sbjct: 217 LRICIVTKDGIKEETVPLRKD 237
>gi|443688987|gb|ELT91509.1| hypothetical protein CAPTEDRAFT_172055 [Capitella teleta]
Length = 229
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/257 (43%), Positives = 155/257 (60%), Gaps = 45/257 (17%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD----HYYYRP 66
TP Q HF+PYS NGG+ +A+AG D+A++ASDTRLS G++I++R K +
Sbjct: 12 TPKQAHFNPYSFNGGSIMAIAGDDFAVVASDTRLSEGFSIHSRNAPKTYKLTDKTVLASA 71
Query: 67 TYNFLMIFTITILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
++ ++ I +L +MY HEH K MS+ ++A M++ ++Y KRFFPYY II GLD
Sbjct: 72 GFHGDVLTEIKVLEARLKMYEHEHGKKMSSQAIAAMLATILYHKRFFPYYVYNIIGGLDE 131
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCVYSYDP+G ER +RAGGS+G LLQ LLDNQ+
Sbjct: 132 EGKGCVYSYDPVGSYEREVYRAGGSAGPLLQPLLDNQI---------------------- 169
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
GF+NQ+ V+K + +KAI ++KD F +AAERDIYTGD +HL
Sbjct: 170 -----------------GFKNQQGVEKVSLSKDKAIKLIKDIFISAAERDIYTGDSLHLK 212
Query: 245 AITKDGIKEYNFPLRKD 261
+TK+G+ E FPLR+D
Sbjct: 213 VVTKEGVSEETFPLRRD 229
>gi|225703280|gb|ACO07486.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 153/261 (58%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPYS NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 IGCSGFHGDCLTLTEIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V P+ EKA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMEGVQHLPLSQEKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C +TKDGIKE PLRKD
Sbjct: 217 LRICIVTKDGIKEETVPLRKD 237
>gi|126311312|ref|XP_001381658.1| PREDICTED: proteasome subunit beta type-1-like [Monodelphis
domestica]
Length = 244
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 28 PVQRRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 87
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 88 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 147
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 148 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 184
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ LE+A+ +VKD F +AAERD+YTGD + +C
Sbjct: 185 ----------------GFKNMQNVEHVPLSLERAMQLVKDVFISAAERDVYTGDSLKICI 228
Query: 246 ITKDGIKEYNFPLRKD 261
+TKDGIKE PLRKD
Sbjct: 229 VTKDGIKEETIPLRKD 244
>gi|225704042|gb|ACO07867.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 153/261 (58%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPYS NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 IGCSGFHGDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V P+ EKA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMEGVQHLPLSQEKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C +TKDGIKE PLRKD
Sbjct: 217 LRICIVTKDGIKEETVPLRKD 237
>gi|225703310|gb|ACO07501.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/256 (44%), Positives = 154/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P++H FSPYS NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K + D +
Sbjct: 21 PVEHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSG 80
Query: 69 NFLMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ T+T + +MY H +NK M++ ++A M+S ++YG+RFFPYY II GLD E
Sbjct: 81 SHGDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE 140
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 141 GKGAVYSFDPVGPYQRDTYKAGGSASAMLQPLLDNQI----------------------- 177
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N E V P+ EKA+ +VKD F +AAERD+YTGD + +C
Sbjct: 178 ----------------GFKNMEGVQHLPLSQEKAVQLVKDVFISAAERDVYTGDALRICI 221
Query: 246 ITKDGIKEYNFPLRKD 261
+TKDGIKE PLRKD
Sbjct: 222 VTKDGIKEETVPLRKD 237
>gi|56118302|ref|NP_001007906.1| proteasome subunit beta type-1 [Gallus gallus]
gi|38680347|gb|AAR26544.1| proteasome subunit beta-type [Gallus gallus]
Length = 237
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 153/261 (58%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY--- 68
P+Q+ FSPY+ NGGT +A+AG D+ I+ASDTRLS GY I++R+ K YR T
Sbjct: 21 PVQYRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKC-----YRLTEQTV 75
Query: 69 --------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II
Sbjct: 76 IGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N +NV+ P+ LEKA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMQNVEHVPLTLEKALQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C +TKDGIKE LRKD
Sbjct: 217 LKICVVTKDGIKEETIQLRKD 237
>gi|326915585|ref|XP_003204095.1| PREDICTED: proteasome subunit beta type-1-like [Meleagris
gallopavo]
Length = 237
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 155/259 (59%), Gaps = 45/259 (17%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYR 65
L P+Q+ FSPY+ NGGT +A+AG D+ I+ASDTRLS GY I++R+ K + +H
Sbjct: 18 LGGPVQYRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYKLTEHTVIG 77
Query: 66 PTY---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ + L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GL
Sbjct: 78 CSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGL 137
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D EGKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQ+
Sbjct: 138 DEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQI-------------------- 177
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
GF+N +NV+ P+ LEKA+ +VKD F +AAERD+YTGD +
Sbjct: 178 -------------------GFKNMQNVEHVPLTLEKALQLVKDVFISAAERDVYTGDALK 218
Query: 243 LCAITKDGIKEYNFPLRKD 261
+C +TKDGIKE LRKD
Sbjct: 219 ICVVTKDGIKEETIQLRKD 237
>gi|156365620|ref|XP_001626742.1| predicted protein [Nematostella vectensis]
gi|156213630|gb|EDO34642.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 159/261 (60%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P Q +FSPY+ NGGT +A++G D+A+IASDTRLS G+ I+TR+ K+ Y+ T + +
Sbjct: 13 PKQTYFSPYAFNGGTVLAISGEDFAVIASDTRLSQGFQIHTRDSPKV-----YKLTGSTV 67
Query: 72 M--------IFTIT---ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ T+T QMY H+H K MS T++A+M+S M+Y +RFFPYYT I+A
Sbjct: 68 LGCSGFHGDCLTLTKHISARLQMYEHDHGKAMSCTAIAQMLSTMLYYRRFFPYYTYNILA 127
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKGCV+S+DP+G ER +RAGGS+ ALLQ LLDNQ+
Sbjct: 128 GLDSEGKGCVFSFDPVGSYEREVYRAGGSASALLQPLLDNQI------------------ 169
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+NQE V TP+ +KA+++VKD FT+AAERDIYTGD
Sbjct: 170 ---------------------GFKNQEGVPHTPLTRDKAVALVKDVFTSAAERDIYTGDA 208
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
V + ++ +G+ E FPLR+D
Sbjct: 209 VIINVVSSEGVSEEAFPLRRD 229
>gi|351714661|gb|EHB17580.1| Proteasome subunit beta type-1 [Heterocephalus glaber]
Length = 240
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+QH FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR K + D +
Sbjct: 24 PLQHRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRNSPKCYKLTDKTVIGCSG 83
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 84 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 143
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 144 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 180
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 181 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 224
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 225 VTKEGIREETIPLRKD 240
>gi|395535314|ref|XP_003769673.1| PREDICTED: proteasome subunit beta type-1 [Sarcophilus harrisii]
Length = 244
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 154/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 28 PVQRRFSPYVFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 87
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 88 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 147
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 148 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 184
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ LE+A+ +VKD F +AAERD+YTGD + +C
Sbjct: 185 ----------------GFKNMQNVEHIPLSLERAMQLVKDVFISAAERDVYTGDSLKICI 228
Query: 246 ITKDGIKEYNFPLRKD 261
+TKDGIKE PLRKD
Sbjct: 229 VTKDGIKEETVPLRKD 244
>gi|17380206|sp|Q9IB83.1|PSB1B_CARAU RecName: Full=Proteasome subunit beta type-1-B; AltName: Full=20S
proteasome beta-6 subunit B; Short=B6-B
gi|7768841|dbj|BAA95592.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 237
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 156/261 (59%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPY+ NGGT +AVAG D+A++ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 IGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EG+G VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N ENV++ P+ EKA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C ITK+GI+E PLRKD
Sbjct: 217 LKICIITKEGIREEIVPLRKD 237
>gi|17380207|sp|Q9IB84.1|PSB1A_CARAU RecName: Full=Proteasome subunit beta type-1-A; AltName: Full=20S
proteasome beta-6 subunit A; Short=B6-A
gi|7768839|dbj|BAA95591.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 238
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 156/261 (59%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPY+ NGGT +AVAG D+A++ASDTRLS GY+I++R+ K Y+ T
Sbjct: 22 PVEHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 76
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 77 IGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIG 136
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EG+G VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 137 GLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 178
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N ENV++ P+ EKA+ +VKD F +AAERD+YTGD
Sbjct: 179 ---------------------GFKNMENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDA 217
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C ITK+GI+E PLRKD
Sbjct: 218 LKICIITKEGIREEIVPLRKD 238
>gi|348561415|ref|XP_003466508.1| PREDICTED: proteasome subunit beta type-1-like [Cavia porcellus]
Length = 241
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQQRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TKDGI+E PLRKD
Sbjct: 226 VTKDGIREETIPLRKD 241
>gi|209732446|gb|ACI67092.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 153/261 (58%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY--- 68
P++H FSPYS NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTNTTV 75
Query: 69 --------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 IGCSGFHGDCLTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V P+ EKA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMEGVQHLPLNQEKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C +TK+GIKE PLRKD
Sbjct: 217 LRICIVTKEGIKEETVPLRKD 237
>gi|195016569|ref|XP_001984439.1| GH16458 [Drosophila grimshawi]
gi|193897921|gb|EDV96787.1| GH16458 [Drosophila grimshawi]
Length = 235
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/259 (46%), Positives = 159/259 (61%), Gaps = 50/259 (19%)
Query: 13 IQH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTY 68
+QH FSPY NGG+ VA+AG D+ +IA+DTRLS+GY+I++R+QSKLF H T
Sbjct: 17 VQHVDFSPYESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKLSPHTVLGSTG 76
Query: 69 NFLMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ ++T L QMY H H K M+T ++A+M+SI+MY +RFFPYY S I+AGLD +
Sbjct: 77 CWCDTLSLTGLMKVRMQMYEHTHMKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKD 136
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYSYDPIGH ERA +RAGG++G+LLQ +LDNQ+
Sbjct: 137 GKGVVYSYDPIGHCERATYRAGGTAGSLLQPVLDNQI----------------------- 173
Query: 186 LTREINALSSKLTILLGFRNQE-NVDKTPVPL--EKAISVVKDAFTAAAERDIYTGDGVH 242
G++NQ D+ P PL ++A+SV D F +AAERDIYTGD V
Sbjct: 174 ----------------GYKNQNLAADQLP-PLTKDRAVSVASDTFISAAERDIYTGDSVL 216
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ ITKDGI++ LRKD
Sbjct: 217 INIITKDGIEQKTLQLRKD 235
>gi|195375426|ref|XP_002046502.1| GJ12457 [Drosophila virilis]
gi|194153660|gb|EDW68844.1| GJ12457 [Drosophila virilis]
Length = 235
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 121/259 (46%), Positives = 158/259 (61%), Gaps = 50/259 (19%)
Query: 13 IQH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTY 68
+QH FSPY NGG+ VA+AG D+ +IA+DTRLS+GY+I++R+QSKLF T
Sbjct: 17 VQHVDFSPYESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKMSPKTVLGSTG 76
Query: 69 NFLMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ ++T L QMY H H K MST ++A+M+SI+MY +RFFPYY S I+AGLD +
Sbjct: 77 CWCDTLSLTGLVKVRMQMYEHTHMKTMSTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKD 136
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYSYDPIGH ERA +RAGG++GALLQ +LDNQ+
Sbjct: 137 GKGAVYSYDPIGHCERATYRAGGTAGALLQPVLDNQI----------------------- 173
Query: 186 LTREINALSSKLTILLGFRNQE-NVDKTPVPL--EKAISVVKDAFTAAAERDIYTGDGVH 242
G++NQ D+ P PL E+A++V D F +AAERDIYTGD V
Sbjct: 174 ----------------GYKNQNLPADQLP-PLTKERAVAVASDTFISAAERDIYTGDSVL 216
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ ITKDG++E LRKD
Sbjct: 217 INIITKDGVEERKLQLRKD 235
>gi|51468069|ref|NP_001003889.1| proteasome subunit beta type-1 [Danio rerio]
gi|49619079|gb|AAT68124.1| proteasome beta-subunit C5 [Danio rerio]
gi|55715844|gb|AAH85580.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Danio rerio]
gi|182891728|gb|AAI65077.1| Psmb1 protein [Danio rerio]
Length = 237
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 155/261 (59%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHKFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 LGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EG+G VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N ENV+ P+ EKA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMENVEHVPLTQEKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C ++K+GIKE PLRKD
Sbjct: 217 LKVCIVSKEGIKEEIVPLRKD 237
>gi|225707182|gb|ACO09437.1| Proteasome subunit beta type 1-A [Osmerus mordax]
Length = 237
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 154/261 (59%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P++H FSPYS NGGT +AVAG D+A++ASDTRLS GY+I++R+ K Y+ T +
Sbjct: 21 PVEHRFSPYSFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 72 M-----------IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 IGCSGFHGDCPTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD +G+G VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEQGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N ENV P+ EKA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMENVQHLPLSQEKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C ITK+GIKE PLRKD
Sbjct: 217 LRICIITKEGIKEETVPLRKD 237
>gi|402868791|ref|XP_003898471.1| PREDICTED: proteasome subunit beta type-1 [Papio anubis]
Length = 241
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETIPLRKD 241
>gi|384944338|gb|AFI35774.1| proteasome subunit beta type-1 precursor [Macaca mulatta]
Length = 241
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|149744029|ref|XP_001499422.1| PREDICTED: proteasome subunit beta type-1-like [Equus caballus]
Length = 241
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS GY+I+TR+ K + D +
Sbjct: 25 PVQLRFSPYAFNGGTILAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMGLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|432114954|gb|ELK36597.1| Proteasome subunit beta type-1 [Myotis davidii]
Length = 240
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 24 PVQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 83
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 84 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 143
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 144 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 180
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 181 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 224
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 225 VTKEGIREETVPLRKD 240
>gi|386781057|ref|NP_001247565.1| proteasome subunit beta type-1 [Macaca mulatta]
gi|355562210|gb|EHH18842.1| hypothetical protein EGK_15528 [Macaca mulatta]
gi|355749047|gb|EHH53530.1| hypothetical protein EGM_14190 [Macaca fascicularis]
gi|380788877|gb|AFE66314.1| proteasome subunit beta type-1 [Macaca mulatta]
Length = 241
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|410960369|ref|XP_003986764.1| PREDICTED: proteasome subunit beta type-1 [Felis catus]
Length = 241
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 155/261 (59%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++ FSPY+ NGGT +A+AG D++I+ASDTRLS GY+I+TR+ K YR T
Sbjct: 25 PLEMRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSIHTRDSPKC-----YRLTDKTV 79
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II
Sbjct: 80 IGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIG 139
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 140 GLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV------------------ 181
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD
Sbjct: 182 ---------------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDA 220
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C +TK+GI+E PLRKD
Sbjct: 221 LKICIVTKEGIREETVPLRKD 241
>gi|195135135|ref|XP_002011990.1| GI16713 [Drosophila mojavensis]
gi|193918254|gb|EDW17121.1| GI16713 [Drosophila mojavensis]
Length = 235
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/259 (46%), Positives = 160/259 (61%), Gaps = 50/259 (19%)
Query: 13 IQH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTY 68
+QH FSPY NGG+ VA+AG D+ +IA+DTRLS+GY+I++R+QSKLF+ T
Sbjct: 17 VQHVDFSPYESNGGSIVAIAGDDFVVIAADTRLSSGYSIHSRDQSKLFEMSPKTVLGSTG 76
Query: 69 NFLMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ ++T L QMY H H K M+T ++A+M+SI+MY +RFFPYY S I+AGLD +
Sbjct: 77 CWCDTLSLTGLVKVRMQMYEHTHLKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKD 136
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYSYDPIGH ERA +RAGGS+GALLQ +LDNQ+
Sbjct: 137 GKGAVYSYDPIGHCERATYRAGGSAGALLQPVLDNQI----------------------- 173
Query: 186 LTREINALSSKLTILLGFRNQE-NVDKTPVPL--EKAISVVKDAFTAAAERDIYTGDGVH 242
G++NQ ++D+ P PL E+A++V D F +AAERDIYTGD V
Sbjct: 174 ----------------GYKNQNLSLDQLP-PLTKERAVAVASDTFISAAERDIYTGDSVL 216
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ IT DGI++ LRKD
Sbjct: 217 INIITADGIEKRELQLRKD 235
>gi|301779700|ref|XP_002925260.1| PREDICTED: proteasome subunit beta type-1-like [Ailuropoda
melanoleuca]
gi|281351745|gb|EFB27329.1| hypothetical protein PANDA_014727 [Ailuropoda melanoleuca]
Length = 241
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS GY+++TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSVHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|354486298|ref|XP_003505318.1| PREDICTED: proteasome subunit beta type-1-like [Cricetulus griseus]
Length = 240
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 24 PVQMRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 83
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 84 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 143
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 144 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 180
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 181 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 224
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 225 VTKEGIREETVPLRKD 240
>gi|291414594|ref|XP_002723544.1| PREDICTED: proteasome beta 1 subunit [Oryctolagus cuniculus]
Length = 241
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PVQRRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHIPLTLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|37231712|gb|AAH58455.1| Proteasome (prosome, macropain) subunit, beta type 1 [Rattus
norvegicus]
gi|149047099|gb|EDL99819.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_a
[Rattus norvegicus]
Length = 240
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 24 PVQMRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 83
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 84 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 143
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 144 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 180
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 181 ----------------GFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICI 224
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 225 VTKEGIREETVPLRKD 240
>gi|16758370|ref|NP_446042.1| proteasome subunit beta type-1 precursor [Rattus norvegicus]
gi|130854|sp|P18421.3|PSB1_RAT RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|56998|emb|CAA36987.1| proteasome subunit RC5 [Rattus norvegicus]
Length = 240
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 24 PVQMRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 83
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 84 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEE 143
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 144 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 180
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 181 ----------------GFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICI 224
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 225 VTKEGIREETVPLRKD 240
>gi|296199648|ref|XP_002747247.1| PREDICTED: proteasome subunit beta type-1-like [Callithrix jacchus]
Length = 241
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETLPLRKD 241
>gi|225705308|gb|ACO08500.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 236
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 152/261 (58%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY--- 68
P++H FSPYS NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 20 PVEHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTNTTV 74
Query: 69 --------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A +S ++YG+RFFPYY II
Sbjct: 75 IGCSGFHGDCLTLTKIIDARLKMYKHSNNKSMTSGAIAATLSTILYGRRFFPYYVYNIIG 134
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 135 GLDEEGKGAVYSFDPVGSYQRGTYKAGGSASAMLQPLLDNQI------------------ 176
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V P+ EKA+ +VKD F +AAERD+YTGD
Sbjct: 177 ---------------------GFKNMEGVQHLPLNQEKAVQLVKDVFISAAERDVYTGDA 215
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C +TK+GIKE PLRKD
Sbjct: 216 LRICIVTKEGIKEETVPLRKD 236
>gi|260799786|ref|XP_002594865.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
gi|229280102|gb|EEN50876.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
Length = 235
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 153/256 (59%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPTY 68
P Q +FSPYS NGGT +A+AG DYA++A D RLS ++I +R+ K L D
Sbjct: 19 PRQQYFSPYSWNGGTVLAIAGEDYAVLACDARLSEYFSILSRDSPKRYKLTDMTVLGCCG 78
Query: 69 NFLMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ T+T + + Y HEHNK MS S+A M+S ++Y +RFFPYYT I+AGLD E
Sbjct: 79 FHGDVLTLTKMLDARLKNYKHEHNKTMSCKSIAAMLSTVLYYRRFFPYYTYNILAGLDEE 138
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKGCVYS+DPIG ER +RAGGS+ ALLQ LLDNQ+G+
Sbjct: 139 GKGCVYSFDPIGSYEREVYRAGGSASALLQPLLDNQIGM--------------------- 177
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
+N + V + PVP EKA+++VKD F +AAERDIYTGD + +
Sbjct: 178 ------------------KNMQGVQRLPVPKEKAVALVKDVFISAAERDIYTGDQIIINV 219
Query: 246 ITKDGIKEYNFPLRKD 261
ITKDGI+E +FPLR+D
Sbjct: 220 ITKDGIQEESFPLRRD 235
>gi|7242197|ref|NP_035315.1| proteasome subunit beta type-1 precursor [Mus musculus]
gi|2499837|sp|O09061.1|PSB1_MOUSE RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|1165122|emb|CAA56701.1| component C5 of proteasome [Mus musculus]
gi|1698584|gb|AAB37251.1| proteasome beta-subunit C5 [Mus musculus]
gi|17390820|gb|AAH18351.1| Proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
gi|26346380|dbj|BAC36841.1| unnamed protein product [Mus musculus]
gi|39754751|gb|AAR30867.1| proteasome beta-subunit C5 [Mus musculus]
gi|74198429|dbj|BAE39698.1| unnamed protein product [Mus musculus]
gi|74205097|dbj|BAE21005.1| unnamed protein product [Mus musculus]
gi|148688516|gb|EDL20463.1| proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
Length = 240
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 24 PVQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 83
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 84 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 143
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 144 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 180
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 181 ----------------GFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICI 224
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 225 VTKEGIREETVPLRKD 240
>gi|426235057|ref|XP_004011507.1| PREDICTED: proteasome subunit beta type-1 [Ovis aries]
Length = 241
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRVCI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|296483812|tpg|DAA25927.1| TPA: proteasome beta 1 subunit precursor [Bos taurus]
Length = 241
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|440894478|gb|ELR46920.1| Proteasome subunit beta type-1, partial [Bos grunniens mutus]
Length = 241
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|297678538|ref|XP_002817127.1| PREDICTED: proteasome subunit beta type-1-like [Pongo abelii]
gi|297679681|ref|XP_002817653.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pongo abelii]
Length = 241
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 154/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYVFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|1165123|emb|CAA56702.1| component C5 of proteasome [Mus musculus]
Length = 225
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 9 PVQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 68
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 69 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 128
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 129 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 165
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 166 ----------------GFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICI 209
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 210 VTKEGIREETVPLRKD 225
>gi|170035625|ref|XP_001845669.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
gi|167877642|gb|EDS41025.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
Length = 231
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 149/254 (58%), Gaps = 45/254 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNF 70
Q F PY NGG+ VA+AG D+A+I +DTRLS+GY+I+TR Q+KLF + T +
Sbjct: 17 QVQFYPYESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRLSEGTVLASTGCW 76
Query: 71 LMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+T L QMY +H K M+T ++A+M+SI+MY +RFFPYY S ++AGLD EG+
Sbjct: 77 CDTLALTSLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDEEGR 136
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G VYSYDPIGH E+ +RAGGS+G LLQ +LDNQ+G+
Sbjct: 137 GVVYSYDPIGHCEKTTYRAGGSAGPLLQPVLDNQIGL----------------------- 173
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
+N PV L KA+S++KD F +A ERDIYTGD V + IT
Sbjct: 174 ----------------KNMVGASTEPVQLAKAVSIIKDTFISATERDIYTGDSVIINIIT 217
Query: 248 KDGIKEYNFPLRKD 261
KDGIKE LRKD
Sbjct: 218 KDGIKEEVVQLRKD 231
>gi|403305890|ref|XP_003943482.1| PREDICTED: proteasome subunit beta type-1 [Saimiri boliviensis
boliviensis]
Length = 241
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|431904620|gb|ELK10002.1| Proteasome subunit beta type-1 [Pteropus alecto]
Length = 241
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PVQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHIPLSLDRAMRLVKDVFISAAERDVYTGDALKVCI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETIPLRKD 241
>gi|332264007|ref|XP_003281040.1| PREDICTED: proteasome subunit beta type-1 [Nomascus leucogenys]
Length = 241
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 154/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY NGGT +A+AG D+AI+ASDTRLS G++++TR+ K + D +
Sbjct: 25 PLQLRFSPYVFNGGTVLAIAGEDFAIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|47217169|emb|CAG11005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 152/259 (58%), Gaps = 55/259 (21%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT------ 67
+H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 23 EHRFSPYTFNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTVIG 77
Query: 68 -----YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ L + I +MY H +NK MS+ ++A M+S ++YG+RFFPYY II GL
Sbjct: 78 CSGFHGDCLTLTKIIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGL 137
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D EGKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 138 DEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI-------------------- 177
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
GF+N + V + P+ EKAI +VKD F +AAERD+YTGD +H
Sbjct: 178 -------------------GFKNMDGVQQVPLTQEKAIQLVKDVFISAAERDVYTGDALH 218
Query: 243 LCAITKDGIKEYNFPLRKD 261
+C ITK+GI+E LRKD
Sbjct: 219 ICIITKEGIQEQTVQLRKD 237
>gi|417397679|gb|JAA45873.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Desmodus rotundus]
Length = 240
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I++R+ K + D +
Sbjct: 24 PVQLRFSPYAFNGGTILAIAGEDFSIVASDTRLSEGFSIHSRDSPKCYKLTDKTVIGCSG 83
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 84 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 143
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 144 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 180
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 181 ----------------GFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDTLKICI 224
Query: 246 ITKDGIKEYNFPLRKD 261
+TKDGI+E PLR+D
Sbjct: 225 VTKDGIREETVPLRRD 240
>gi|449278062|gb|EMC86029.1| Proteasome subunit beta type-1 [Columba livia]
Length = 237
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 153/264 (57%), Gaps = 55/264 (20%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY 68
L P+Q+ FSPY+ NGGT +A+AG D++++ASDTRLS GY I+ R+ K Y+ T
Sbjct: 18 LGAPVQNRFSPYTFNGGTVLAIAGEDFSLVASDTRLSEGYAIHCRDSPKC-----YKLTE 72
Query: 69 -----------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY
Sbjct: 73 RTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYN 132
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
II GLD EGKG VYS+DP+G +R +F+A GS+ A+LQ LLDNQ+
Sbjct: 133 IIGGLDEEGKGAVYSFDPVGSYQRDSFKAAGSASAMLQPLLDNQI--------------- 177
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
GF+N +NV+ P+ LEKA+ +VKD F +AAERD+YT
Sbjct: 178 ------------------------GFKNMQNVEHLPLTLEKALQLVKDVFISAAERDVYT 213
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GD + +C +TKDGIKE LRKD
Sbjct: 214 GDALKICIVTKDGIKEETVQLRKD 237
>gi|387017846|gb|AFJ51041.1| Proteasome subunit beta type-1-like [Crotalus adamanteus]
Length = 239
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 157/268 (58%), Gaps = 56/268 (20%)
Query: 6 KQILET-PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYY 64
++I E+ +Q FSPY+ NGGT +A+AG D+ ++ASDTRLS Y I++R K Y
Sbjct: 16 REIRESSAVQRRFSPYTFNGGTILAIAGEDFVVVASDTRLSEDYAIHSRNSPKC-----Y 70
Query: 65 RPT-----------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPY 113
+ T + L + I +MY H +NK+MS+ ++A M+S ++Y +RFFPY
Sbjct: 71 KLTDTTVIGCSGFHGDCLTLTKILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPY 130
Query: 114 YTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMK 173
Y II GLD EGKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQVG+
Sbjct: 131 YVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGL--------- 181
Query: 174 SVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAER 233
+N + V + P+ LEKA+ +VKD F +AAER
Sbjct: 182 ------------------------------KNMQGVKQLPLSLEKALQLVKDVFISAAER 211
Query: 234 DIYTGDGVHLCAITKDGIKEYNFPLRKD 261
D+YTGD + +C ITKDGIKE +FPLR+D
Sbjct: 212 DVYTGDALKICVITKDGIKEESFPLRRD 239
>gi|432852541|ref|XP_004067299.1| PREDICTED: proteasome subunit beta type-1-B-like [Oryzias latipes]
Length = 237
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 109/261 (41%), Positives = 153/261 (58%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P +H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PTEHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++Y +RFFPYY II
Sbjct: 76 LGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD +GKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEQGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V+ P+ +KA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMEGVEHVPLTKDKAVQLVKDVFVSAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C +TK+GI+E N PLRKD
Sbjct: 217 LRICIVTKEGIEEQNIPLRKD 237
>gi|62897947|dbj|BAD96913.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 241
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 153/261 (58%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P+Q FSPY NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K YR T
Sbjct: 25 PLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKC-----YRLTDKTV 79
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II
Sbjct: 80 IGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIG 139
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 140 GLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV------------------ 181
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD
Sbjct: 182 ---------------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDA 220
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C +TK+GI+E LRKD
Sbjct: 221 LRICIVTKEGIREETVSLRKD 241
>gi|73974057|ref|XP_532275.2| PREDICTED: proteasome subunit beta type-1 [Canis lupus familiaris]
Length = 241
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 154/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PQQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 226 VTKEGIREETVPLRKD 241
>gi|348534148|ref|XP_003454565.1| PREDICTED: proteasome subunit beta type-1-A-like [Oreochromis
niloticus]
Length = 237
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 152/261 (58%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHKFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++Y +RFFPYY II
Sbjct: 76 LGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V+ P+ +KA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMEGVEHVPLTKDKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C ITK+GI E PLRKD
Sbjct: 217 LRICVITKEGINEETIPLRKD 237
>gi|346986249|ref|NP_001231282.1| proteasome subunit beta type-1 [Sus scrofa]
Length = 241
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 154/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PSQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+G++E PLRKD
Sbjct: 226 VTKEGVREETVPLRKD 241
>gi|395839143|ref|XP_003792460.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1
[Otolemur garnettii]
Length = 343
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 154/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 127 PLQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 186
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 187 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 246
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 247 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 283
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 284 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKICI 327
Query: 246 ITKDGIKEYNFPLRKD 261
+T+DG +E PLRKD
Sbjct: 328 VTRDGTREETIPLRKD 343
>gi|229367074|gb|ACQ58517.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 151/261 (57%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 IGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD GKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEHGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V P+ +KA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C ITK+GI E PLRKD
Sbjct: 217 LRVCIITKEGISEQTVPLRKD 237
>gi|229367266|gb|ACQ58613.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 151/261 (57%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II
Sbjct: 76 IGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD GKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEHGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V P+ +KA+ +VKD F +AAERD+YTGD
Sbjct: 178 ---------------------GFKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYTGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C ITK+GI E PLRKD
Sbjct: 217 LRVCIITKEGISEQTVPLRKD 237
>gi|335955152|gb|AEH76582.1| proteasome subunit beta type [Epinephelus bruneus]
Length = 225
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 150/261 (57%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 9 PVEHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 63
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M+ ++A M+S ++YG+RFFPYY II
Sbjct: 64 IGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTCGAIAAMLSTILYGRRFFPYYVYNIIG 123
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 124 GLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQI------------------ 165
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V P+ +KA+ +VKD F +AAERD+YTGD
Sbjct: 166 ---------------------GFKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYTGDA 204
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C I K+GI E PLRKD
Sbjct: 205 LRICIINKEGISEQTIPLRKD 225
>gi|194750661|ref|XP_001957648.1| GF10515 [Drosophila ananassae]
gi|190624930|gb|EDV40454.1| GF10515 [Drosophila ananassae]
Length = 235
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/254 (45%), Positives = 153/254 (60%), Gaps = 43/254 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNF 70
Q FSPY NGG+ VA+AG D+ +IA+DTRLS+GYNI++R+QSKLF D T +
Sbjct: 19 QADFSPYESNGGSIVAIAGDDFVVIAADTRLSSGYNIHSRDQSKLFKLSDQTVLGSTGCW 78
Query: 71 LMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
++T L Q Y H H + M+T ++A+M+SI MY +RFFPYY S I+AG+D +GK
Sbjct: 79 ADTLSLTGLLKVRMQGYEHTHLRTMATDAVAQMLSITMYNRRFFPYYVSNILAGIDKDGK 138
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G VYSYDPIGH ERA +RAGG++G LLQ +LDNQ+G
Sbjct: 139 GVVYSYDPIGHCERAFYRAGGTAGTLLQPVLDNQIG-----------------------H 175
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
+ IN SS+L L +E+A+++ D F +AAERDIYTGD V + IT
Sbjct: 176 KNINLSSSELPKL--------------TIERAVAIASDTFISAAERDIYTGDSVLINIIT 221
Query: 248 KDGIKEYNFPLRKD 261
KDGI+E LR D
Sbjct: 222 KDGIEEKKLQLRLD 235
>gi|84370111|ref|NP_001033628.1| proteasome subunit beta type-1 precursor [Bos taurus]
gi|108860905|sp|Q2TBX6.1|PSB1_BOVIN RecName: Full=Proteasome subunit beta type-1; Flags: Precursor
gi|83638719|gb|AAI09495.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Bos taurus]
Length = 241
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 154/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+ PLRKD
Sbjct: 226 VTKEGIRGETVPLRKD 241
>gi|12653473|gb|AAH00508.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|157928354|gb|ABW03473.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|157928990|gb|ABW03780.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
Length = 241
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 153/256 (59%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E LRKD
Sbjct: 226 VTKEGIREETVSLRKD 241
>gi|54696302|gb|AAV38523.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|54696304|gb|AAV38524.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|61367228|gb|AAX42969.1| proteasome subunit beta type 1 [synthetic construct]
gi|61367236|gb|AAX42970.1| proteasome subunit beta type 1 [synthetic construct]
Length = 242
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 153/256 (59%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E LRKD
Sbjct: 226 VTKEGIREETVSLRKD 241
>gi|4506193|ref|NP_002784.1| proteasome subunit beta type-1 [Homo sapiens]
gi|114610308|ref|XP_001140101.1| PREDICTED: proteasome subunit beta type-1 isoform 4 [Pan
troglodytes]
gi|332825501|ref|XP_003311646.1| PREDICTED: proteasome subunit beta type-1 [Pan troglodytes]
gi|397502108|ref|XP_003821710.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pan paniscus]
gi|397502110|ref|XP_003821711.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pan paniscus]
gi|397502112|ref|XP_003821712.1| PREDICTED: proteasome subunit beta type-1 isoform 3 [Pan paniscus]
gi|130853|sp|P20618.2|PSB1_HUMAN RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|220026|dbj|BAA00658.1| proteasome subunit C5 [Homo sapiens]
gi|18088777|gb|AAH20807.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|54696306|gb|AAV38525.1| proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|61357229|gb|AAX41355.1| proteasome subunit beta type 1 [synthetic construct]
gi|197692325|dbj|BAG70126.1| proteasome beta 1 subunit [Homo sapiens]
gi|197692585|dbj|BAG70256.1| proteasome beta 1 subunit [Homo sapiens]
gi|261860708|dbj|BAI46876.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|410210668|gb|JAA02553.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410259166|gb|JAA17549.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410301642|gb|JAA29421.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410335833|gb|JAA36863.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
Length = 241
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 153/256 (59%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------- 181
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 182 ----------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICI 225
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E LRKD
Sbjct: 226 VTKEGIREETVSLRKD 241
>gi|125977126|ref|XP_001352596.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|195168113|ref|XP_002024876.1| GL17976 [Drosophila persimilis]
gi|54641344|gb|EAL30094.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|194108306|gb|EDW30349.1| GL17976 [Drosophila persimilis]
Length = 235
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/251 (45%), Positives = 150/251 (59%), Gaps = 43/251 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
FSPY NGG+ VA+AG D+ +IA+DTRLS+GYNI+TR+QSKLF + T +
Sbjct: 22 FSPYESNGGSIVAIAGEDFVVIAADTRLSSGYNIHTRKQSKLFPLSNQTVLASTGCWCDT 81
Query: 74 FTIT---ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
++T L Q Y H H K M+T ++A+M+SI+MY +RFFPYY S I+AG+D +GKG V
Sbjct: 82 LSLTGLMKLRMQNYEHTHLKTMTTDAVAQMLSIIMYNRRFFPYYVSNILAGIDKDGKGVV 141
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
+SYDPIGH ERA +RAGG++GALLQ +LDNQ+G K M
Sbjct: 142 FSYDPIGHCERATYRAGGTAGALLQPVLDNQIGY-----KNM------------------ 178
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
N D V E+A++V D F +AAERDIYTGD V + ITKDG
Sbjct: 179 --------------NLHGEDAPEVTKERAVAVASDTFISAAERDIYTGDSVLINIITKDG 224
Query: 251 IKEYNFPLRKD 261
I+ LR+D
Sbjct: 225 IETQELQLRQD 235
>gi|195328187|ref|XP_002030798.1| GM24382 [Drosophila sechellia]
gi|195590871|ref|XP_002085168.1| GD12455 [Drosophila simulans]
gi|194119741|gb|EDW41784.1| GM24382 [Drosophila sechellia]
gi|194197177|gb|EDX10753.1| GD12455 [Drosophila simulans]
Length = 235
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/251 (45%), Positives = 150/251 (59%), Gaps = 43/251 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMI 73
FSPY NGG+ VA+AG D+A+IA+DTRLS+GYNI++R QSKLF T +
Sbjct: 22 FSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTGCWADT 81
Query: 74 FTIT---ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
++T + Q Y H H + M+T ++A+M+SI MY +RFFPYY S I+AG+D EGKG V
Sbjct: 82 LSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVV 141
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
YSYDPIGH E+A +RAGG++G LLQ +LDNQ+G K M
Sbjct: 142 YSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIG-----HKNM------------------ 178
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
N E+ DK + ++A+SV D F +AAERDIYTGD V + ITKDG
Sbjct: 179 --------------NLEDADKIKLTKDRAVSVASDTFISAAERDIYTGDSVLINIITKDG 224
Query: 251 IKEYNFPLRKD 261
I+ LRKD
Sbjct: 225 IEVRTLSLRKD 235
>gi|194872539|ref|XP_001973034.1| GG15866 [Drosophila erecta]
gi|190654817|gb|EDV52060.1| GG15866 [Drosophila erecta]
Length = 235
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/251 (45%), Positives = 149/251 (59%), Gaps = 43/251 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMI 73
FSPY NGG+ VA+AG D+A+IA+DTRLS+GYNI++R QSKLF T +
Sbjct: 22 FSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSHQTVLGSTGCWADT 81
Query: 74 FTIT---ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
++T + Q Y H H + M+T ++A+M+SI MY +RFFPYY S I+AG+D EGKG V
Sbjct: 82 LSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVV 141
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
YSYDPIGH E+A +RAGG++G LLQ +LDNQ+G K M
Sbjct: 142 YSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIG-----HKNM------------------ 178
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
N + DK + E+A+SV D F +AAERDIYTGD V + IT DG
Sbjct: 179 --------------NLADADKIKLTKERAVSVASDTFISAAERDIYTGDSVLINIITNDG 224
Query: 251 IKEYNFPLRKD 261
I+ PLR+D
Sbjct: 225 IEVQTLPLRQD 235
>gi|17737605|ref|NP_524115.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|12643277|sp|P40304.2|PSB1_DROME RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome 26 kDa subunit; Flags: Precursor
gi|7294080|gb|AAF49435.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|15291705|gb|AAK93121.1| LD24159p [Drosophila melanogaster]
gi|220947536|gb|ACL86311.1| Pros26-PA [synthetic construct]
Length = 235
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/254 (45%), Positives = 151/254 (59%), Gaps = 49/254 (19%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRP--------TY 68
FSPY NGG+ VA+AG D+A+IA+DTRLS+GYNI++R QSKLF P +
Sbjct: 22 FSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFK---LSPQTVLGSAGCW 78
Query: 69 NFLMIFTITI-LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ T +I + Q Y H H + M+T ++A+M+SI MY +RFFPYY S I+AG+D EGK
Sbjct: 79 ADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGK 138
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G VYSYDPIGH E+A +RAGG++G LLQ +LDNQ+G K M
Sbjct: 139 GVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIG-----HKNM--------------- 178
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
N E+ DK + E+A+SV D F +AAERDIYTGD V + IT
Sbjct: 179 -----------------NLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVLINIIT 221
Query: 248 KDGIKEYNFPLRKD 261
KDGI+ LR+D
Sbjct: 222 KDGIEVRTLTLRQD 235
>gi|378792314|pdb|3UNB|L Chain L, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792328|pdb|3UNB|Z Chain Z, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792342|pdb|3UNB|NN Chain n, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792356|pdb|3UNB|2 Chain 2, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792370|pdb|3UNE|L Chain L, Mouse Constitutive 20s Proteasome
gi|378792384|pdb|3UNE|Z Chain Z, Mouse Constitutive 20s Proteasome
gi|378792398|pdb|3UNE|NN Chain n, Mouse Constitutive 20s Proteasome
gi|378792412|pdb|3UNE|2 Chain 2, Mouse Constitutive 20s Proteasome
gi|378792426|pdb|3UNF|L Chain L, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792440|pdb|3UNF|Z Chain Z, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792454|pdb|3UNH|L Chain L, Mouse 20s Immunoproteasome
gi|378792468|pdb|3UNH|Z Chain Z, Mouse 20s Immunoproteasome
Length = 213
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 152/252 (60%), Gaps = 45/252 (17%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY---N 69
FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D + +
Sbjct: 1 RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGD 60
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD EGKG
Sbjct: 61 CLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGA 120
Query: 130 VYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 121 VYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV--------------------------- 153
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+
Sbjct: 154 ------------GFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKE 201
Query: 250 GIKEYNFPLRKD 261
GI+E PLRKD
Sbjct: 202 GIREETVPLRKD 213
>gi|45360639|ref|NP_988993.1| proteasome beta 1 subunit [Xenopus (Silurana) tropicalis]
gi|38174388|gb|AAH61284.1| proteasome (prosome, macropain) subunit, beta type, 1 [Xenopus
(Silurana) tropicalis]
gi|89272031|emb|CAJ83174.1| proteasome (prosome macropain) subunit beta type 1 [Xenopus
(Silurana) tropicalis]
Length = 239
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 155/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT- 67
P++ F+PY+ NGGT +A+AG D+A++ASDTRLS GY+I++R K + D+ T
Sbjct: 23 PVEQRFNPYTFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDNTVIGCTG 82
Query: 68 --YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M++ ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 83 FHADCLTLTKIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 142
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 143 GKGAVYSFDPVGSYQRDAYKAGGSASAMLQPLLDNQI----------------------- 179
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
G++N +NV++ P+ LEKA+ ++KD F +AAERD+YTGD +H+
Sbjct: 180 ----------------GYKNMQNVEQLPLTLEKALKLIKDVFISAAERDVYTGDALHISI 223
Query: 246 ITKDGIKEYNFPLRKD 261
+TKDGI+E + LRKD
Sbjct: 224 VTKDGIREESVSLRKD 239
>gi|327262119|ref|XP_003215873.1| PREDICTED: proteasome subunit beta type-1-like [Anolis
carolinensis]
Length = 239
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/260 (41%), Positives = 150/260 (57%), Gaps = 55/260 (21%)
Query: 13 IQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT----- 67
+Q FSPY+ NGGT +A+AG D++I+ASDTRLS Y +++R+ K Y+ T
Sbjct: 24 MQRRFSPYTFNGGTILAIAGEDFSIVASDTRLSEDYAVHSRDSPKC-----YKLTDTTVI 78
Query: 68 ------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+ L + I +MY H +NK+MS ++A M+S ++Y +RFFPYY II G
Sbjct: 79 GCSGFHGDCLTLTKIIEARLKMYKHSNNKIMSAGAIAAMLSTILYSRRFFPYYVYNIIGG 138
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
LD EGKG VYS+DP+G +R F+AGGS+ A+LQ LLDNQVG+
Sbjct: 139 LDEEGKGAVYSFDPVGSYQRDTFKAGGSASAMLQPLLDNQVGL----------------- 181
Query: 182 HDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGV 241
+N +NV + + LEKA+ +VKD F +AAERD+YTGD +
Sbjct: 182 ----------------------KNMQNVQQVSLTLEKALQLVKDVFISAAERDVYTGDAL 219
Query: 242 HLCAITKDGIKEYNFPLRKD 261
+C ITKDGIKE PLR+D
Sbjct: 220 KICIITKDGIKEETVPLRRD 239
>gi|195495065|ref|XP_002095108.1| GE22205 [Drosophila yakuba]
gi|194181209|gb|EDW94820.1| GE22205 [Drosophila yakuba]
Length = 235
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/251 (45%), Positives = 149/251 (59%), Gaps = 43/251 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMI 73
FSPY NGG+ VA+AG D+A+IA+DTRLS+GYNI++R QSKLF T +
Sbjct: 22 FSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTGCWADT 81
Query: 74 FTIT---ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
++T + Q Y H H + M+T ++A+M+SI MY +RFFPYY S I+AG+D EGKG V
Sbjct: 82 LSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVV 141
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
YSYDPIGH E+A +RAGG++G LLQ +LDNQ+G K M
Sbjct: 142 YSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIG-----HKNM------------------ 178
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
N + DK + E+A+SV D F +AAERDIYTGD V + ITKDG
Sbjct: 179 --------------NLADADKIKLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDG 224
Query: 251 IKEYNFPLRKD 261
I+ LR+D
Sbjct: 225 IEVRTLTLRQD 235
>gi|392868|gb|AAC46465.1| proteasome subunit [Drosophila melanogaster]
Length = 235
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/254 (45%), Positives = 150/254 (59%), Gaps = 49/254 (19%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRP--------TY 68
FSPY NGG+ VA+AG D+A+IA+DTRLS+GYNI++R QSKLF P +
Sbjct: 22 FSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFK---LSPQTVLGSAGCW 78
Query: 69 NFLMIFTITI-LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ T +I + Q Y H H + M+T ++A+M+SI MY +RFFPYY S I+AG+D EGK
Sbjct: 79 ADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGK 138
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G VYSYDPIGH E+A +RAGG++G LLQ +LDNQ+G K M
Sbjct: 139 GVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIG-----HKNM--------------- 178
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
N E+ DK + E A+SV D F +AAERDIYTGD V + IT
Sbjct: 179 -----------------NLEDADKIKLTKEWAVSVASDTFISAAERDIYTGDSVLINIIT 221
Query: 248 KDGIKEYNFPLRKD 261
KDGI+ LR+D
Sbjct: 222 KDGIEVRTLTLRQD 235
>gi|148227103|ref|NP_001080435.1| proteasome beta 1 subunit [Xenopus laevis]
gi|27694605|gb|AAH43739.1| Psmb1-prov protein [Xenopus laevis]
gi|114107802|gb|AAI23122.1| Psmb1 protein [Xenopus laevis]
Length = 239
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 154/256 (60%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT- 67
P++ F+PY+ NGGT +A+AG D+A++ASDTRLS GY+I++R K + D T
Sbjct: 23 PVEQRFNPYTFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCTG 82
Query: 68 --YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M++ ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 83 FHADCLTLTKIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 142
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 143 GKGAVYSFDPVGSYQRDAYKAGGSASAMLQPLLDNQI----------------------- 179
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
G++N +NV++ P+ LEKA+ ++KD F +AAERD+YTGD +H+
Sbjct: 180 ----------------GYKNMQNVEQLPLTLEKALKLIKDVFISAAERDVYTGDALHISI 223
Query: 246 ITKDGIKEYNFPLRKD 261
+TKDG++E + LRKD
Sbjct: 224 VTKDGVREESISLRKD 239
>gi|289742321|gb|ADD19908.1| 20S proteasome regulatory subunit beta type PSMB1/PRE7 [Glossina
morsitans morsitans]
Length = 236
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 151/256 (58%), Gaps = 43/256 (16%)
Query: 13 IQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTY 68
++H F PY NGG+ VA+AG D+A+IA+D+RLS+GY I+TR ++KLF + T
Sbjct: 17 VKHQDFQPYESNGGSIVAIAGNDFAVIAADSRLSSGYTIHTRNENKLFQLSSNAVLGSTG 76
Query: 69 NFLMIFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ +T L QMY H H+K MST + A+M+SI+MY +RFFPYY S ++AGL+ E
Sbjct: 77 CWCDTLALTALVKARMQMYEHTHSKTMSTDATAQMLSILMYNRRFFPYYVSNVLAGLNSE 136
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYSYDPIGH E++N RAGGS+GALLQ +LDNQ+G L I+ +
Sbjct: 137 GKGVVYSYDPIGHFEKSNSRAGGSAGALLQPVLDNQIG------------LKNIKMEHIG 184
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
E+ E+A+++ DAF +A ERDIYTGD V +
Sbjct: 185 FPAELTK------------------------ERAVAIASDAFISATERDIYTGDSVQINI 220
Query: 246 ITKDGIKEYNFPLRKD 261
ITK GI+ LRKD
Sbjct: 221 ITKSGIEVKELQLRKD 236
>gi|226372486|gb|ACO51868.1| Proteasome subunit beta type-1-A [Rana catesbeiana]
Length = 240
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/261 (41%), Positives = 152/261 (58%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY--- 68
P+Q FSPY+ NGGT +A+AG D+A++ASDTRLS Y+I++R K Y+ T
Sbjct: 24 PVQQRFSPYTFNGGTVLALAGEDFALVASDTRLSEDYSIHSRNTPKC-----YKLTDKTV 78
Query: 69 --------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++Y +RFFPYY II
Sbjct: 79 IGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTSNAIAAMLSTILYSRRFFPYYVYNIIG 138
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 139 GLDEEGKGAVYSFDPVGSYQRDAYKAGGSASAMLQPLLDNQI------------------ 180
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
G++N +NV+ P+ LEKA+ +VKD F +AAERD+YTGD
Sbjct: 181 ---------------------GYKNMQNVEHLPLTLEKALQLVKDVFISAAERDVYTGDA 219
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ + +TKDGIKE + PLRKD
Sbjct: 220 LKISIVTKDGIKEESIPLRKD 240
>gi|21465654|pdb|1IRU|M Chain M, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465668|pdb|1IRU|1 Chain 1, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 213
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 150/252 (59%), Gaps = 45/252 (17%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY---N 69
FSPY NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D + +
Sbjct: 1 RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGD 60
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD EGKG
Sbjct: 61 CLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGA 120
Query: 130 VYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
VYS+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 121 VYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV--------------------------- 153
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+
Sbjct: 154 ------------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKE 201
Query: 250 GIKEYNFPLRKD 261
GI+E LRKD
Sbjct: 202 GIREETVSLRKD 213
>gi|229366584|gb|ACQ58272.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/261 (41%), Positives = 149/261 (57%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 21 PVEHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 75
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M++ ++A M+S ++YG+ FFPYY II
Sbjct: 76 IGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRGFFPYYVYNIIG 135
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD GKG VYS+DP+G +R ++AGGS+ A+LQ LLDNQ+
Sbjct: 136 GLDEHGKGAVYSFDPVGSYQRDTYKAGGSASAVLQPLLDNQI------------------ 177
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
GF+N E V P+ +KA+ +VKD F +AAERD+Y GD
Sbjct: 178 ---------------------GFKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYIGDA 216
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ +C ITK+GI E PLRKD
Sbjct: 217 LRVCIITKEGISEQTVPLRKD 237
>gi|242247122|ref|NP_001156136.1| proteasome subunit beta type-like [Acyrthosiphon pisum]
gi|239799300|dbj|BAH70578.1| ACYPI003417 [Acyrthosiphon pisum]
Length = 222
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/256 (44%), Positives = 149/256 (58%), Gaps = 49/256 (19%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P +F PY+ NGG+ VA++G D+AI+ASDTRLS GY IYTR+QSKLF D T
Sbjct: 10 PKARNFEPYASNGGSIVAISGKDFAIVASDTRLSEGYMIYTRKQSKLFQLSDKSVLGCTG 69
Query: 69 NFLMIFTIT-ILPFQM--YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ ++T I+ Q+ YL++HN +M S+A+++S ++Y +RFFPYY ++AGLD
Sbjct: 70 CWCDTLSLTNIIQSQLKSYLYDHNTIMQPNSIAQLLSTLLYSRRFFPYYVYNVLAGLDIN 129
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G+GC+YSYDP+GH E+ N+ AGGSSG L+Q LD+
Sbjct: 130 GEGCLYSYDPVGHCEKVNYTAGGSSGVLMQPFLDS------------------------- 164
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
LG R EN PV E+A+S+VKDAFTAA ERDIYTGD V
Sbjct: 165 --------------WLGNRTAEN----PVTEEEALSLVKDAFTAAGERDIYTGDEVVYNI 206
Query: 246 ITKDGIKEYNFPLRKD 261
I K+GIK LRKD
Sbjct: 207 IKKNGIKTGVVQLRKD 222
>gi|340374856|ref|XP_003385953.1| PREDICTED: proteasome subunit beta type-1-B-like [Amphimedon
queenslandica]
Length = 223
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P++ +SPYS NGGT +AV+G D+++IASDTRLS G+ IY+R+ K Y+ N +
Sbjct: 7 PVEVQWSPYSWNGGTVLAVSGEDFSVIASDTRLSEGFQIYSRDFPKT-----YQLGDNVV 61
Query: 72 M-----------IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ + + ++Y H + K MS SLA+++S ++Y +RFFPYYT I+A
Sbjct: 62 LGSCGFQGDVTTLNKVIEAQLKIYDHIYQKKMSCESLAQLLSTILYTRRFFPYYTYNILA 121
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD +GKGCV+S+DPIG ER +RAGGS+ ++LQ LLDNQ+G++
Sbjct: 122 GLDSKGKGCVFSFDPIGSYEREVYRAGGSASSMLQPLLDNQIGLL--------------- 166
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
NQ V+K P+ +EKA+ +V D FT+AAERDIYTGDG
Sbjct: 167 ------------------------NQTGVEKKPLSVEKAVQLVTDVFTSAAERDIYTGDG 202
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ + I+ DG+ PLR+D
Sbjct: 203 IRINIISADGVDIKEVPLRRD 223
>gi|195998844|ref|XP_002109290.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
gi|190587414|gb|EDV27456.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
Length = 235
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 153/256 (59%), Gaps = 45/256 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTYN 69
P QH F PY+ NGGT V VAG ++AI+A DTRLS G+ I++R+ SK++ + T
Sbjct: 19 PTQHRFDPYTLNGGTIVGVAGDNFAILAGDTRLSEGFMIHSRDTSKIYKLTEKTFLGTCG 78
Query: 70 FLM-IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
F + T+T L MY EH K MS+T++++M+S ++Y +RFFPYYT I+AG+D +
Sbjct: 79 FQGDVLTLTRLLNARLTMYEFEHRKKMSSTAISQMLSTVLYYRRFFPYYTFNILAGIDTD 138
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKGC+YSYD +G+ E+ + A G++ ++LQ LLDNQV
Sbjct: 139 GKGCIYSYDAVGNYEKHTYHASGTASSMLQPLLDNQV----------------------- 175
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
G+ NQE V + P+ ++KA +++KD F +A ERD+YTGD +H+
Sbjct: 176 ----------------GYLNQEGVRRVPLTIDKARTLIKDVFISATERDMYTGDSLHIVT 219
Query: 246 ITKDGIKEYNFPLRKD 261
IT DG+ E +FPLR+D
Sbjct: 220 ITSDGVTEDHFPLRRD 235
>gi|390365759|ref|XP_001177076.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 201
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/245 (44%), Positives = 147/245 (60%), Gaps = 55/245 (22%)
Query: 28 VAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM--------IFTITIL 79
+A+AG DYAIIASDTRLS G++I+TR+ K Y+ T ++ + T+T +
Sbjct: 1 MAMAGDDYAIIASDTRLSEGFSIHTRDSPK-----NYQLTDGTVLGCAGFHGDVLTLTKV 55
Query: 80 ---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+M HEH+K M T+++A M+S ++Y +RFFPYYT I+AGLD EGKGCVYS+DP+
Sbjct: 56 LTARLKMXEHEHHKKMFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGKGCVYSFDPV 115
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G ER +RA GSS ALLQ LLDNQ+
Sbjct: 116 GSYERETYRAAGSSSALLQPLLDNQI---------------------------------- 141
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
G +NQE K P+P++KA+++VKD F +AAERDIYTGDG+ L +TKDG KE F
Sbjct: 142 -----GGKNQEGWVKEPIPVDKAVALVKDVFISAAERDIYTGDGIVLHVLTKDGCKEERF 196
Query: 257 PLRKD 261
PLR+D
Sbjct: 197 PLRRD 201
>gi|221117643|ref|XP_002165958.1| PREDICTED: proteasome subunit beta type-1-A-like [Hydra
magnipapillata]
Length = 226
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 152/265 (57%), Gaps = 55/265 (20%)
Query: 8 ILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
I ++P++H FSPYS GG+ +A+AG D+A+IASDTRLS G+ I++R K Y+ T
Sbjct: 6 ISDSPMKHDFSPYSSQGGSLLAIAGEDFAVIASDTRLSEGFLIHSRNIPKT-----YQLT 60
Query: 68 YNFLM--------IFTITI---LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
++ + T+T MY HEH K MS +S+A+M+S +Y KRFFPYYT
Sbjct: 61 DTTILGSCGFHGDVLTLTKNIKTRLVMYEHEHFKTMSCSSIAQMLSTTLYYKRFFPYYTY 120
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
IIAGLD +GKG +YS+DP+G ER +RAGGS A+LQ+ LDNQ+G
Sbjct: 121 NIIAGLDSDGKGAIYSFDPVGSYERETYRAGGSCSAMLQSFLDNQIG------------- 167
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
+LA +I P+ LE+ + ++KD F +AAERDI
Sbjct: 168 ----QKNLAKKSDI----------------------PLSLERCVELIKDVFISAAERDIE 201
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
TGDGV + ITK+G K FPLR+D
Sbjct: 202 TGDGVLISIITKEGTKSEVFPLRRD 226
>gi|405957660|gb|EKC23857.1| Proteasome subunit beta type-1 [Crassostrea gigas]
Length = 229
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 151/261 (57%), Gaps = 55/261 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P Q +FSPY+ NGGT +A+AG D+ ++ SDTRLS G++I+TR+ K Y+ T + +
Sbjct: 13 PKQTYFSPYAMNGGTCLAIAGEDFVVVGSDTRLSQGFSIFTRDLPKT-----YKLTTSTV 67
Query: 72 M--------IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ + T+T + +M+ HEH+K M+T+ +A M+S M+Y +RFFPYY +IA
Sbjct: 68 LGACGFHGDVLTLTKVLNARLKMFEHEHHKKMTTSEIAAMLSTMLYHRRFFPYYVYNLIA 127
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G +RA GS+ A+LQ LLDNQ+G+
Sbjct: 128 GLDEEGKGVVYSFDPVGSYGSDGYRARGSAAAMLQPLLDNQIGL---------------- 171
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
+NQ+NV + + EK +++VKD F +AAERDIYTGD
Sbjct: 172 -----------------------KNQQNVQRVSLSKEKVVNLVKDVFISAAERDIYTGDA 208
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
V + ITKDG FPLR+D
Sbjct: 209 VVVHVITKDGTTTERFPLRRD 229
>gi|119567805|gb|EAW47420.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_a [Homo sapiens]
Length = 219
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 143/242 (59%), Gaps = 45/242 (18%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY---NFLMIFTITIL 79
T +A+AG D+AI+ASDTRLS G++I+TR+ K + D + + L + I
Sbjct: 17 TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEA 76
Query: 80 PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHT 139
+MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD EGKG VYS+DP+G
Sbjct: 77 RLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSY 136
Query: 140 ERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTI 199
+R +F+AGGS+ A+LQ LLDNQV
Sbjct: 137 QRDSFKAGGSASAMLQPLLDNQV------------------------------------- 159
Query: 200 LLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLR 259
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI+E LR
Sbjct: 160 --GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLR 217
Query: 260 KD 261
KD
Sbjct: 218 KD 219
>gi|198424168|ref|XP_002121356.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 229
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 146/272 (53%), Gaps = 56/272 (20%)
Query: 1 MALVTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD 60
M V +Q P QH F PY+ NGG +AVAG D+A++ASDTRLS G+ I+TR+ K
Sbjct: 3 MTEVHRQASVGPKQHRFEPYAFNGGNILAVAGGDFAVVASDTRLSQGFMIHTRDHPKAV- 61
Query: 61 HYYYRPTYNFLMIF------TITI-----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKR 109
+ T N ++ ++T+ + MY H H K ST+++A MIS M+Y KR
Sbjct: 62 ----QLTANTVLAQSGFEGDSLTLKKHVQMRIGMYEHNHGKTPSTSAIAAMISKMLYYKR 117
Query: 110 FFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSS 169
FFPYY I+AGLD EGKGCVYSYDP+G ER +RA G++ LLQ LLDNQ+
Sbjct: 118 FFPYYVYNIVAGLDNEGKGCVYSYDPVGSYEREQYRAAGAANELLQPLLDNQI------- 170
Query: 170 KQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTA 229
GF+N P+ E+A+ + D F +
Sbjct: 171 --------------------------------GFKNMSEAG-PPLSKERAVQLCIDCFIS 197
Query: 230 AAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
AAERDI TGD V + I KDG++ FPLR+D
Sbjct: 198 AAERDITTGDCVLIQVIDKDGVETKKFPLRRD 229
>gi|344306709|ref|XP_003422027.1| PREDICTED: hypothetical protein LOC100675710 [Loxodonta africana]
Length = 560
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 143/248 (57%), Gaps = 57/248 (22%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD------------HYYYRPTYNFLMI 73
T +A+AG D++I+ASDTRLS G++++TR+ K + H + L +
Sbjct: 358 TVLAIAGEDFSIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHG------DCLTL 411
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD EGKG VYS+
Sbjct: 412 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 471
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 472 DPVGSYQRDSFKAGGSASAMLQPLLDNQV------------------------------- 500
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
GF+N +NV+ P+ L++A+ +V+D F +AAERD+YTGD + +C +T++G++E
Sbjct: 501 --------GFKNMQNVEHVPLSLDRALRLVRDVFISAAERDVYTGDALRICIVTQEGVRE 552
Query: 254 YNFPLRKD 261
PLR+D
Sbjct: 553 ETLPLRRD 560
>gi|391338616|ref|XP_003743654.1| PREDICTED: proteasome subunit beta type-1-like [Metaseiulus
occidentalis]
Length = 233
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 143/255 (56%), Gaps = 45/255 (17%)
Query: 13 IQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYN 69
+Q F PY DN GT V +AG D+A+I SD RLS G++I++R+QSKLF D +
Sbjct: 18 LQRGFDPYRDNAGTLVGIAGEDFAVIGSDLRLSLGFSIFSRDQSKLFKLTDRAVLGSSGC 77
Query: 70 FLMIFTITI---LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ ++ + + Y EHN+ MST ++A+ S M+Y +RFFPY+ I+AG+D +G
Sbjct: 78 WADCVSLNKFLEIRLKTYGFEHNQPMSTKAIAQCCSTMLYSRRFFPYFAWNILAGIDEDG 137
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG +YSYDP+G+ ER ++A G+SG + LD+
Sbjct: 138 KGAIYSYDPVGNFERVPYQAAGNSGPQVLPFLDS-------------------------- 171
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
++G +NQ N DK P+ E+AI+++KD F +AAERDI GDG H+ I
Sbjct: 172 -------------IVGKKNQSNPDKAPITKERAINLIKDIFISAAERDITVGDGTHIIVI 218
Query: 247 TKDGIKEYNFPLRKD 261
TKDG++E LRKD
Sbjct: 219 TKDGLEEIRLDLRKD 233
>gi|444728635|gb|ELW69084.1| Proteasome subunit beta type-1 [Tupaia chinensis]
Length = 283
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 162/273 (59%), Gaps = 37/273 (13%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT- 67
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++++TR+ K + D +
Sbjct: 25 PVQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSG 84
Query: 68 --YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFF
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRFF-------------- 130
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQH-------SSKQMKSVLGG 178
KG VYS+DP+G +R +F+AGGS+ A+LQ LLDNQ+ H + + S++
Sbjct: 131 XKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQLNSDLHFGLPLLLTRPGLTSLICP 190
Query: 179 IRTH-DLALTREINALSS---------KLTILLGFRNQENVDKTPVPLEKAISVVKDAFT 228
+ H + + + L S L+ L+GF+N +NV+ P+ L++A+ +VKD F
Sbjct: 191 VCFHMHITWSSSLLCLISITPPFTLPLLLSELVGFKNMQNVEHIPLSLDRAMRLVKDVFI 250
Query: 229 AAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
+AAERD+YTGD + +C +TK+G++E PLR+D
Sbjct: 251 SAAERDVYTGDALRICIVTKEGVREETVPLRRD 283
>gi|349805257|gb|AEQ18101.1| putative proteasome beta 1 subunit [Hymenochirus curtipes]
Length = 205
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 141/244 (57%), Gaps = 45/244 (18%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTIT 77
GGT +A+AG D+AI+ASDTRLS GY+I++R K + D + + L + I
Sbjct: 1 GGTVLALAGEDFAIVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCSGFHADCLTLTKII 60
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+MY H +NK M++ ++A M+S ++Y +RFFPYY II GLD EGKG VYS+DP+G
Sbjct: 61 EARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVG 120
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+R ++AGGS+ A+LQ LLDNQ+
Sbjct: 121 SYQRDAYKAGGSASAMLQPLLDNQI----------------------------------- 145
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFP 257
G++N N ++ P+ LEKAI +VKD F +A ERD+YTGD + + +TK+GI+E +
Sbjct: 146 ----GYKNMPNAEQVPLTLEKAIKLVKDVFISATERDVYTGDSLKISIVTKEGIREESLS 201
Query: 258 LRKD 261
LRKD
Sbjct: 202 LRKD 205
>gi|320163476|gb|EFW40375.1| proteasome subunit beta type-1 [Capsaspora owczarzaki ATCC 30864]
Length = 238
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 143/255 (56%), Gaps = 46/255 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNF 70
+H FSPY+ NGGT VAVAG ++A++ASDTRLS Y I+TR K F D
Sbjct: 23 KHDFSPYASNGGTVVAVAGENFAVVASDTRLSEYYGIHTRNCPKTFVLSDKTVLASCGFH 82
Query: 71 LMIFTITILPF---QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ T+T F + Y H+H K M+T ++A+M+S +Y +RFFP+YT +I GLD GK
Sbjct: 83 GDVLTLTKNIFTRLRKYEHQHEKTMATHAIAQMLSNTLYYRRFFPFYTYNVIGGLDESGK 142
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G VYSYDP+G ER ++RA G++ ALLQ LLDNQ
Sbjct: 143 GAVYSYDPVGSYERESYRAAGTASALLQPLLDNQ-------------------------- 176
Query: 188 REINALSSKLTILLGFRN-QENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
LG++N NV + P+ + +A+++VKD F AA ERDIYTGD V + I
Sbjct: 177 -------------LGYKNLAPNVPRPPLTVARAVAIVKDVFAAATERDIYTGDSVDIQVI 223
Query: 247 TKDGIKEYNFPLRKD 261
T +G+ + LRKD
Sbjct: 224 TSEGVATERYELRKD 238
>gi|260941638|ref|XP_002614985.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851408|gb|EEQ40872.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 241
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 147/263 (55%), Gaps = 48/263 (18%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
PI+H F+PYSDNGGT + +AG D+A++A DTR+ +GYNI +R + K+FD N
Sbjct: 15 VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRIVSGYNIDSRYEPKIFD-----VGDNI 69
Query: 71 LM-----------IFTITILPFQMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
+M + F+ Y +HN K ++ S A+ I ++YGKRFFPYY ST+
Sbjct: 70 VMTANGFAADGAALIDQFRSSFKWYKFDHNNKKLTIRSAARYIQHLLYGKRFFPYYVSTL 129
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
IAGLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV Q + G
Sbjct: 130 IAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----KNQYEPGSDG 185
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ +L + L++ + +VKDAF++A ER IY G
Sbjct: 186 TKKKELRYLK---------------------------LDEVLQLVKDAFSSATERHIYVG 218
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + +TKDG+++ +PL++D
Sbjct: 219 DGLEIFIVTKDGVRKEYYPLKRD 241
>gi|210075667|ref|XP_502489.2| YALI0D06523p [Yarrowia lipolytica]
gi|199425772|emb|CAG80677.2| YALI0D06523p [Yarrowia lipolytica CLIB122]
Length = 248
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 148/269 (55%), Gaps = 55/269 (20%)
Query: 4 VTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYY 63
V + + + PI+H F+PY DNGGT + +AG D+A++A DTR + GY+I +R Q K+FD
Sbjct: 24 VQENVNQEPIEHRFNPYGDNGGTVLGIAGDDFALLAGDTRNTTGYSINSRYQPKVFD--- 80
Query: 64 YRPTYNFLM-----------IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFP 112
N L+ + ++Y +++NK + S A+ I M+Y KRFFP
Sbjct: 81 --VGDNILVTANGFSADGDALIENIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFP 138
Query: 113 YYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQM 172
YY TIIAGLD EGKG VYSYDP+G ER RAGGS+ +L+ LD+QV
Sbjct: 139 YYVHTIIAGLDEEGKGAVYSYDPVGSYEREFCRAGGSAASLVMPFLDSQVNK-------- 190
Query: 173 KSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAE 232
+NQ+ + P+ LE+A+ VVKDAF++A E
Sbjct: 191 -------------------------------KNQQVENPPPLTLEEALKVVKDAFSSATE 219
Query: 233 RDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
R I+ GDG+ + +TK+G+++ FPL++D
Sbjct: 220 RHIHVGDGLEILIVTKEGVRKEFFPLKRD 248
>gi|302309124|ref|NP_986343.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|299788212|gb|AAS54167.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|374109588|gb|AEY98493.1| FAGL324Wp [Ashbya gossypii FDAG1]
Length = 243
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 142/261 (54%), Gaps = 37/261 (14%)
Query: 7 QILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYY 64
++ PIQH F+PY DNGGT + +AG D+A++A DTR + GY+I +RE+ K+FD
Sbjct: 14 EVHSVPIQHQFNPYDDNGGTILGIAGEDFAVLAGDTRHTTGYSINSREEPKVFDCGDNIL 73
Query: 65 RPTYNFLMIFTITILPFQ----MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
F + F+ Y +HNK M+ S A+ I ++YGKR FPYY TIIA
Sbjct: 74 ISANGFAADGDALVKRFKNSMKWYRFDHNKKMTIKSAARSIQHLLYGKRMFPYYVHTIIA 133
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV Q + G +
Sbjct: 134 GLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----KNQYEPDSNGTK 189
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
L + +++ + +V+DAFT+A ER I+ GDG
Sbjct: 190 KRALRF---------------------------LSVDEVVRLVRDAFTSATERHIHVGDG 222
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ + +TKDG++E + L+KD
Sbjct: 223 LQIMIVTKDGVREEFYSLKKD 243
>gi|402077428|gb|EJT72777.1| proteasome component C5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 264
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 147/268 (54%), Gaps = 44/268 (16%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY 68
L+ QH F PY+DNGG+T+A+AG D+AI+A DTR+++GY+I TR K+F +
Sbjct: 26 LDGTRQHRFDPYTDNGGSTLAIAGADFAIMAGDTRMASGYSINTRFYPKVF-RIGGTTSD 84
Query: 69 NFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPY 113
++++ F +MY + H K MS + AK +S ++Y KRFFPY
Sbjct: 85 QKDATLVLSVVGFAADGEALKERLDAICKMYRYRHGKPMSAKACAKRLSTILYQKRFFPY 144
Query: 114 YTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMK 173
YT I+AGLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV + +
Sbjct: 145 YTHAILAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF------KNQ 198
Query: 174 SVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAER 233
+ G HDL + ++ P+P ++ +VKDAF A ER
Sbjct: 199 YIPGSGEGHDL----------------------QERERVPLPRDQVEILVKDAFDGAVER 236
Query: 234 DIYTGDGVHLCAITKDGIKEYNFPLRKD 261
I GDG+ + ITKDGI+E PL++D
Sbjct: 237 HIEVGDGLQMMIITKDGIEEVILPLKQD 264
>gi|384485678|gb|EIE77858.1| hypothetical protein RO3G_02562 [Rhizopus delemar RA 99-880]
Length = 232
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 139/260 (53%), Gaps = 52/260 (20%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY--- 68
P+QH F PY DNGGT+VA+AG D+ I+A+DTR S GYNI +R K Y T
Sbjct: 15 PMQHRFEPYDDNGGTSVAIAGKDFCIVAADTRQSTGYNINSRFAPKA---YKLSETSVIA 71
Query: 69 ------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ L + + + Y H+K MS T+LA+M+SI +Y KRFFPYY+ ++ G+
Sbjct: 72 MNGFHADGLTLKKVLDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGV 131
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D EGKG VY YD IG ER RA GS+ AL+Q LDNQV SK
Sbjct: 132 DEEGKGAVYCYDAIGSYEREKCRASGSAAALIQPFLDNQV------SK------------ 173
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
+N +NV + L++AI +VKDAFT+A ERDIYTGD +
Sbjct: 174 ---------------------KNMQNVSTEDIELDEAIKIVKDAFTSATERDIYTGDNLQ 212
Query: 243 LCAITKDGIKEYNF-PLRKD 261
+ I KD E PL+KD
Sbjct: 213 IFIIRKDQPVEIQVHPLKKD 232
>gi|190348096|gb|EDK40488.2| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
6260]
Length = 242
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 146/258 (56%), Gaps = 38/258 (14%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTY 68
PI+H F+PYSDNGGT + +AG D+A++A DTR GY+I TR + ++FD
Sbjct: 16 VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVVGYSINTRYEPRVFDVGDNIVMTAN 75
Query: 69 NFLMIFTITILPF----QMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
F I F + Y +HN K +S +S A+ I ++YGKRFFPYY ST+IAGLD
Sbjct: 76 GFDADGAALIDRFRNSLKWYKFDHNGKRLSISSAARYIQHLLYGKRFFPYYVSTLIAGLD 135
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHD 183
EG+G VYSYDP+G ER RAGG++ +L+ LDNQV + + V G D
Sbjct: 136 DEGRGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF------KNQYVPGS----D 185
Query: 184 LALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHL 243
+E+ LS LE+ I +V+DAFT+A ER IY GDG+ +
Sbjct: 186 GKKKKELRYLS---------------------LEEVIQLVRDAFTSATERHIYVGDGLEI 224
Query: 244 CAITKDGIKEYNFPLRKD 261
+TK+G++ FPL++D
Sbjct: 225 LIVTKEGVRTEYFPLKRD 242
>gi|384497220|gb|EIE87711.1| hypothetical protein RO3G_12422 [Rhizopus delemar RA 99-880]
Length = 232
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 139/260 (53%), Gaps = 52/260 (20%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY--- 68
P+QH F PY DNGGT+VA+AG D+ I+A+DTR S GYNI +R K Y T
Sbjct: 15 PMQHRFEPYDDNGGTSVAIAGKDFCIVAADTRQSTGYNINSRFSPKA---YKLSETSVIA 71
Query: 69 ------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ L + + + Y H+K MS T+LA+M+SI +Y KRFFPYY+ ++ G+
Sbjct: 72 MNGFHADGLTLKKVLDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGV 131
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D EGKG VY YD IG ER RA GS+ AL+Q LDNQV SK
Sbjct: 132 DEEGKGAVYCYDAIGSYEREKCRASGSAAALIQPFLDNQV------SK------------ 173
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
+N +NV + L++AI VVKDAFT+A ERDIYTGD +
Sbjct: 174 ---------------------KNMQNVSLEDIELDEAIKVVKDAFTSATERDIYTGDNLQ 212
Query: 243 LCAITKDGIKEYNF-PLRKD 261
+ I KD + PL+KD
Sbjct: 213 IFIIRKDQPVDVQIHPLKKD 232
>gi|146415774|ref|XP_001483857.1| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
6260]
Length = 242
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 145/258 (56%), Gaps = 38/258 (14%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTY 68
PI+H F+PYSDNGGT + +AG D+A++A DTR GY+I TR + ++FD
Sbjct: 16 VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVVGYSINTRYEPRVFDVGDNIVMTAN 75
Query: 69 NFLMIFTITILPF----QMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
F I F + Y +HN K +S S A+ I ++YGKRFFPYY ST+IAGLD
Sbjct: 76 GFDADGAALIDRFRNSLKWYKFDHNGKRLSILSAARYIQHLLYGKRFFPYYVSTLIAGLD 135
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHD 183
EG+G VYSYDP+G ER RAGG++ +L+ LDNQV + + V G D
Sbjct: 136 DEGRGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF------KNQYVPGS----D 185
Query: 184 LALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHL 243
+E+ LS LE+ I +V+DAFT+A ER IY GDG+ +
Sbjct: 186 GKKKKELRYLS---------------------LEEVIQLVRDAFTSATERHIYVGDGLEI 224
Query: 244 CAITKDGIKEYNFPLRKD 261
+TK+G++ FPL++D
Sbjct: 225 LIVTKEGVRTEYFPLKRD 242
>gi|290986448|ref|XP_002675936.1| predicted protein [Naegleria gruberi]
gi|284089535|gb|EFC43192.1| predicted protein [Naegleria gruberi]
Length = 223
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 137/251 (54%), Gaps = 45/251 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNF 70
FSPY DNGGTT+A+ GPDY I+A+DTR+S GY+I TR+ +KL D +
Sbjct: 12 FSPYEDNGGTTLAIPGPDYVIVAADTRMSLGYSIQTRKSTKLCKLTDKCVIASAGMQSDA 71
Query: 71 LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
+ + + Y H+H K MS ++ +M+S M+Y +RFFPYYT ++AGLD +GKG V
Sbjct: 72 ATLHKVLKMRLVEYEHQHGKPMSVVAVGQMLSNMLYNRRFFPYYTFNLVAGLDTDGKGIV 131
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
+SYD IG + + GS L+Q LLDNQV
Sbjct: 132 FSYDAIGSYQSVEVGSQGSGQTLIQPLLDNQV---------------------------- 163
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
F+N V T + LE+++S+VKDAFT+A ERDIYTGD V + ITK+G
Sbjct: 164 -----------AFKNHLLVPNTDLTLEQSLSIVKDAFTSAGERDIYTGDSVEILIITKEG 212
Query: 251 IKEYNFPLRKD 261
IK L+KD
Sbjct: 213 IKTEILELKKD 223
>gi|328766922|gb|EGF76974.1| hypothetical protein BATDEDRAFT_92136 [Batrachochytrium
dendrobatidis JAM81]
Length = 231
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 143/261 (54%), Gaps = 49/261 (18%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY 68
+ PI+H FSPY+DNGGTT+A+AG D+ +IA DTR S GY+I TR K+ H T
Sbjct: 12 VRVPIEHAFSPYTDNGGTTLAIAGDDFCVIAGDTRQSEGYSINTRYAPKV--HEMRNGTV 69
Query: 69 ---NFLMIFTITILP-----FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ + T++ + Y +H+K MS ++A+M+S ++Y KRFFPY++ +
Sbjct: 70 LATGGMFADSQTLMKRIQQRLEWYQFQHDKNMSAPAMAQMLSTILYYKRFFPYFSWCSVG 129
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD GKGCVY+YDP+G+ ER ++ GGS+G L+Q LDNQ+G H S KS+
Sbjct: 130 GLDEHGKGCVYTYDPVGNYERVSWDCGGSAGKLIQPFLDNQIG-KHHMSGASKSL----- 183
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
LE +VKDAFT+A ERDIYTGD
Sbjct: 184 ---------------------------------PSLETVKRIVKDAFTSATERDIYTGDF 210
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ + ITKDGI + PL+ D
Sbjct: 211 LEIFVITKDGITKEMLPLKLD 231
>gi|406602407|emb|CCH46023.1| Proteasome subunit beta type-1-A [Wickerhamomyces ciferrii]
Length = 242
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 143/257 (55%), Gaps = 37/257 (14%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTY 68
TPI+H F+PYSDNGGT + +AG D++++A DTR + GY+I +R + K+FD
Sbjct: 17 TPIEHRFNPYSDNGGTILGIAGEDFSVLAGDTRHTVGYSINSRYEPKVFDAGDNIVVSAN 76
Query: 69 NFLMIFTITILPFQMYLH----EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F + F+ +L +NK +S +S A+ I M+YGKRFFPYY TIIAGLD
Sbjct: 77 GFSADGNALVSRFKNHLKWYHFNNNKKISLSSAARFIQHMLYGKRFFPYYVHTIIAGLDD 136
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKG VYS+DP+G ER RAGG++ +L+ LDNQV D
Sbjct: 137 EGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGT----------DG 186
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
+ +E+ LS LE+ I +V+DAF++A ER I+ GDG+ +
Sbjct: 187 KVKKELKYLS---------------------LEEVIQLVRDAFSSATERHIHVGDGLEIL 225
Query: 245 AITKDGIKEYNFPLRKD 261
+TKDG++ F L++D
Sbjct: 226 IVTKDGVRTEYFDLKRD 242
>gi|389626457|ref|XP_003710882.1| proteasome component C5 [Magnaporthe oryzae 70-15]
gi|351650411|gb|EHA58270.1| proteasome component C5 [Magnaporthe oryzae 70-15]
gi|440470291|gb|ELQ39366.1| proteasome component C5 [Magnaporthe oryzae Y34]
gi|440486750|gb|ELQ66588.1| proteasome component C5 [Magnaporthe oryzae P131]
Length = 265
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 146/263 (55%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F+PY+DNGG+T+A+AG D+AI+A DTR+++GY+I TR K+F N
Sbjct: 32 QHGFNPYTDNGGSTLAIAGDDFAIMAGDTRMASGYSINTRFYPKVF-KIGGTTADNSDAT 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y + H K M+ + AK +S ++Y KRFFPYYT I
Sbjct: 91 LVLSVVGFAADGEALKERLDAICKIYRYRHGKPMTVKACAKRLSTILYQKRFFPYYTHAI 150
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AG+D EG G VYSYDP+G ER RAGG++ +L+ LDNQV + + V G
Sbjct: 151 LAGIDEEGHGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF------KNQYVPGS 204
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
HDL QE ++ P+P E ++VKDAF A ER I G
Sbjct: 205 GTGHDL---------------------QER-ERKPLPRETVETLVKDAFDGAVERHIEVG 242
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + ITKDGI+E PL+KD
Sbjct: 243 DGLQMMIITKDGIEEVIMPLKKD 265
>gi|241954356|ref|XP_002419899.1| proteasome component, putative [Candida dubliniensis CD36]
gi|223643240|emb|CAX42114.1| proteasome component, putative [Candida dubliniensis CD36]
Length = 245
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 148/274 (54%), Gaps = 58/274 (21%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---- 60
+ +I PI+H F+PYSDNGGT + +AG D+A++A DTR GY+I +R +SK+ D
Sbjct: 13 SSEIQTVPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDD 72
Query: 61 -----HYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYT 115
+ + + F +++ ++ + K ++ S A+ I ++YGKR FPYY
Sbjct: 73 ILMTANGFAADGIALIDRFKQSLIWYK--FDNNGKKLAIKSAARYIQQLLYGKRLFPYYV 130
Query: 116 STIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSV 175
ST+IAGLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 131 STLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQV------------- 177
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQ-----ENVDKTPVP---LEKAISVVKDAF 227
F+NQ + +K P+ LE+ I +V+DAF
Sbjct: 178 --------------------------NFKNQFVPGTDGKEKKPLKYLTLEEVIQLVRDAF 211
Query: 228 TAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
T+A ER IY GDG+ + +TKDGI+ +PL++D
Sbjct: 212 TSAGERHIYVGDGLEIKIVTKDGIRTEYYPLKRD 245
>gi|354547791|emb|CCE44526.1| hypothetical protein CPAR2_403290 [Candida parapsilosis]
Length = 244
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 145/269 (53%), Gaps = 48/269 (17%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYY 64
+ +I PI+H F+PYSDNGGT + +AG D+A++A DTR GY+I +R + K+ +
Sbjct: 12 SAEIHSVPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPKI-----H 66
Query: 65 RPTYNFLMIFT------ITIL-----PFQMYLHEH-NKVMSTTSLAKMISIMMYGKRFFP 112
N LM + +L F Y ++ N+ + +S A+ I ++YGKRFFP
Sbjct: 67 NVGDNILMTANGFAADGVALLDKFKQAFTWYKFDNGNRKLEISSAARYIQHLLYGKRFFP 126
Query: 113 YYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQM 172
YY ST+IAGLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 127 YYVSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF-------- 178
Query: 173 KSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAE 232
K + G +E + LE+ I +V+DAF +A E
Sbjct: 179 -----------------------KNQFVPGTDGKEKKPLKYLSLEEVIQLVRDAFNSAGE 215
Query: 233 RDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
R IY GDG+ + +TKDG++ FPL++D
Sbjct: 216 RHIYVGDGLEILIVTKDGVRTEYFPLKRD 244
>gi|50427419|ref|XP_462322.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
gi|49657992|emb|CAG90828.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
Length = 242
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 144/264 (54%), Gaps = 38/264 (14%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HY 62
+ ++ PI+H F+PYSDNGGT + +AG D++++A DTR GY+I +R + K+FD
Sbjct: 10 SSEVHTVPIEHRFNPYSDNGGTVLGIAGEDFSVLAGDTRQVVGYSINSRYEPKIFDVGDD 69
Query: 63 YYRPTYNFLMIFTITILPF----QMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTST 117
F I F + Y +H K +S S A+ I ++YGKRFFPYY ST
Sbjct: 70 IAMTANGFAADGAALIDRFRNQLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPYYVST 129
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
+IAGLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 130 LIAGLDDEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF------------- 176
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
K + G E + + L++ + +VKDAF++A ER IY
Sbjct: 177 ------------------KNQFVPGTNGTEKKELRYLSLDEVLQLVKDAFSSATERHIYV 218
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + ITKDGI++ +PL++D
Sbjct: 219 GDGLEIFIITKDGIRKEYYPLKRD 242
>gi|367011887|ref|XP_003680444.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
gi|359748103|emb|CCE91233.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
Length = 241
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 145/264 (54%), Gaps = 38/264 (14%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HY 62
+ ++ TPIQH F+PY+DNGGT + +AG D+A++A DTR + Y+I +R +SK+FD
Sbjct: 9 SNEVAHTPIQHQFNPYTDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRHESKVFDCGDN 68
Query: 63 YYRPTYNFLMIFTITILPFQ----MYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTST 117
F + F+ Y +HN K +S +S A+ I ++YGKRFFPYY T
Sbjct: 69 IVMSANGFAADGEALVKRFKNSVKWYHFDHNDKKLSLSSAARNIQHLLYGKRFFPYYVHT 128
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
IIAGLD EGKG VYS+DP+G ER RAGG++ +L+ LDNQV
Sbjct: 129 IIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNF------------- 175
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
K G + +T + +E+ I +V+DAFT+A ER I
Sbjct: 176 ------------------KNQFEPGTNGKVRRPQTYLSIEEVIKLVRDAFTSATERHIQV 217
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +TKDG+++ + L++D
Sbjct: 218 GDGLEILIVTKDGVRKEFYELKRD 241
>gi|223993685|ref|XP_002286526.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977841|gb|EED96167.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 280
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 140/262 (53%), Gaps = 50/262 (19%)
Query: 8 ILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
I ++P + FSPY NGGTT+A++GPDYA++A+DTRLS+GY I +R SKL H
Sbjct: 61 ITQSPWERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKL--HPLTEKC 118
Query: 68 Y--------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
+ + ++ + ++Y H H K M+T S+A+M+ +Y KRFFPYY+ ++
Sbjct: 119 VLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVL 178
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
AG+D EGKG VYSYD IG ER F A GS A L L+DN +I H ++
Sbjct: 179 AGIDSEGKGAVYSYDAIGSFERTPFSASGSGQAFLIPLMDN---VISHKNR--------- 226
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
L RE+ + E+ + +VKDAF A ERDIYTGD
Sbjct: 227 ----LDQKRELGS------------------------EEVVEIVKDAFLTAGERDIYTGD 258
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
V + IT GI+ F L+ D
Sbjct: 259 AVEIMVITAKGIESETFKLKAD 280
>gi|50308397|ref|XP_454200.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643335|emb|CAG99287.1| KLLA0E05633p [Kluyveromyces lactis]
Length = 240
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 142/261 (54%), Gaps = 37/261 (14%)
Query: 7 QILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYY 64
++ + PIQH F+PYSDNGGT + +AG D+A++A DTR + Y+I +R + K+F+
Sbjct: 11 ELSKVPIQHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFECEDNIL 70
Query: 65 RPTYNFLMIFTITILPF---QMYLH-EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
F + F QM+ H HNK ++ S A+ I ++YGKR FPYY TIIA
Sbjct: 71 ISANGFAADGEALVKRFKNSQMWYHFNHNKKLTIKSAARNIQHLLYGKRMFPYYVHTIIA 130
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G ER RAGGS+ +L+ LDNQV +
Sbjct: 131 GLDEEGKGAVYSFDPVGSYEREQCRAGGSAASLIMPFLDNQVNLKNQYEP---------- 180
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
+ N K LG +E+ I +V+DAFT+A ER I GDG
Sbjct: 181 --------DSNGTKRKEVKYLG-------------VEEVIKLVRDAFTSATERHINVGDG 219
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ + +TKDG+++ F L++D
Sbjct: 220 LEILIVTKDGVRKEYFDLKRD 240
>gi|448530387|ref|XP_003870050.1| Pre7 protein [Candida orthopsilosis Co 90-125]
gi|380354404|emb|CCG23919.1| Pre7 protein [Candida orthopsilosis]
Length = 286
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 145/269 (53%), Gaps = 48/269 (17%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYY 64
+ +I PI+H F+PYSDNGGT + +AG D+A++A DTR GY+I +R + K+ +
Sbjct: 54 SSEIHSVPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPKI-----H 108
Query: 65 RPTYNFLMIFT------ITIL-----PFQMYLHEH-NKVMSTTSLAKMISIMMYGKRFFP 112
N LM + ++ F Y ++ N+ + +S A+ I ++YGKRFFP
Sbjct: 109 NVGDNILMTANGFAADGVALIDKFKQSFTWYKFDNGNRKLEISSAARYIQHLLYGKRFFP 168
Query: 113 YYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQM 172
YY ST+IAGLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 169 YYVSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF-------- 220
Query: 173 KSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAE 232
K + G +E + LE+ I +V+DAF +A E
Sbjct: 221 -----------------------KNQFVPGTDGKEKKPLKYLSLEEVIQLVRDAFNSAGE 257
Query: 233 RDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
R IY GDG+ + +TKDG++ +PL++D
Sbjct: 258 RHIYVGDGLEILIVTKDGVRTEYYPLKRD 286
>gi|254574222|ref|XP_002494220.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|238034019|emb|CAY72041.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|328353959|emb|CCA40356.1| 20S proteasome subunit beta 6 [Komagataella pastoris CBS 7435]
Length = 243
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 140/261 (53%), Gaps = 39/261 (14%)
Query: 8 ILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYY 64
+ PI+H F+PYSDNGGT + +AG D+AI+A DTR + GY+I +R + K+F D
Sbjct: 15 VSNVPIEHQFNPYSDNGGTVLGIAGEDFAILAGDTRHTTGYSINSRYEPKVFSVGDELLI 74
Query: 65 RPTYNFLMIFTITILPF----QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
F + F + Y +H K ++ S A+ I ++YGKRFFPYY TIIA
Sbjct: 75 TAN-GFAADGDALVKRFRNQLKWYHFDHKKNLTIKSAARFIQHLLYGKRFFPYYVHTIIA 133
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKG VYS+DP+G ER RAGG + +L+ LDNQV QM G
Sbjct: 134 GLDEEGKGAVYSFDPVGSYEREQCRAGGGAASLIMPFLDNQVNF----KNQMDPDSNGTA 189
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
+L + L++ IS+V+DAF++A ER I GDG
Sbjct: 190 KKELKYLK---------------------------LDEVISLVRDAFSSATERHINVGDG 222
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ + +TKDG++ +PL+KD
Sbjct: 223 LEILIVTKDGVRTEYYPLKKD 243
>gi|255720859|ref|XP_002545364.1| proteasome component C5 [Candida tropicalis MYA-3404]
gi|240135853|gb|EER35406.1| proteasome component C5 [Candida tropicalis MYA-3404]
Length = 245
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 144/266 (54%), Gaps = 42/266 (15%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---- 60
+ +I PI+H F+PYSDNGGT + +AG D+A++A DTR GY+I +R + K+ D
Sbjct: 13 SAEIQSVPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVTGYSIQSRYEPKVHDVGDD 72
Query: 61 -----HYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYT 115
+ + + F +++ ++ K ++ S A+ I ++YGKRFFP+Y
Sbjct: 73 ILMTANGFAADGVALIDRFKQSLIWYK--FDNGGKKLTIKSAARYIQHLLYGKRFFPFYV 130
Query: 116 STIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSV 175
ST+IAGLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 131 STLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----------- 179
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDI 235
K + G +E + LE+ I +V+DAFT+A ER I
Sbjct: 180 --------------------KNQFVPGTDGKEKKPLKYLSLEEVIQLVRDAFTSAGERHI 219
Query: 236 YTGDGVHLCAITKDGIKEYNFPLRKD 261
Y GDG+ + +TKDGI+ +PL++D
Sbjct: 220 YVGDGLEIKIVTKDGIRTEYYPLKRD 245
>gi|385303180|gb|EIF47271.1| proteasome component c5 [Dekkera bruxellensis AWRI1499]
Length = 243
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 144/263 (54%), Gaps = 43/263 (16%)
Query: 8 ILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD------- 60
+ + PI+H F+PY DNGGT + +AG D+A++A DTR + GY+I +R + K+ +
Sbjct: 15 VXQEPIEHRFNPYQDNGGTILGIAGEDFAVLAGDTRQTVGYSIDSRYEPKVHNVGDNLLL 74
Query: 61 --HYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
+ + + +F + + Y ++NK MS S A++I ++YGKR FPYY STI
Sbjct: 75 SANGFSADGVQLVKVFQNQL---KWYHFDNNKDMSVDSAARLIQHLLYGKRMFPYYVSTI 131
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD EGKG +YS+DP+G ER RAGG++ +L+ LDNQV QM G
Sbjct: 132 LAGLDKEGKGAIYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----KNQMDPESNG 187
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ R I L L++ I +V+DAFT+A ER I G
Sbjct: 188 TK------QRPIKYLK---------------------LDEVIQLVRDAFTSATERHIEVG 220
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + +TKDG+ +PL++D
Sbjct: 221 DGLQILVVTKDGVXTEYYPLKRD 243
>gi|344305208|gb|EGW35440.1| proteasome component C5 [Spathaspora passalidarum NRRL Y-27907]
Length = 242
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 140/264 (53%), Gaps = 38/264 (14%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HY 62
+ +I PI+H F+PYSDNGGT + +AG D+A++A DTR GY+I +R + K+FD
Sbjct: 10 SNEIHSVPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPKIFDVGDN 69
Query: 63 YYRPTYNFLMIFTITILPFQMYLHEHN-----KVMSTTSLAKMISIMMYGKRFFPYYTST 117
F I F+ L + + S A+ I ++YGKRFFPYY ST
Sbjct: 70 IVMTANGFAADGVALIDKFRQQLKWYKFDNFGGKLEIKSAARYIQHLLYGKRFFPYYVST 129
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
+IAGLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 130 LIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF------------- 176
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
K + G +E + LE+ I +V+DAF++A ER IY
Sbjct: 177 ------------------KNQFIPGTDGKEKKPLKYLTLEEVIELVRDAFSSATERHIYV 218
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +TKDG++ +PL++D
Sbjct: 219 GDGLEIKIVTKDGVRTEYYPLKRD 242
>gi|366989313|ref|XP_003674424.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
gi|342300287|emb|CCC68046.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
Length = 241
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 149/267 (55%), Gaps = 44/267 (16%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---- 60
+ ++ TPI+H F+PYSDNGGT + +AG D+A++A DTR + Y+I +R + K+FD
Sbjct: 9 SSEVRNTPIEHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDN 68
Query: 61 -----HYYYRPTYNFLMIFTITILPFQMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYY 114
+ + + F ++ + Y +HN K ++ +S A+ I ++YGKRFFPYY
Sbjct: 69 IVISANGFAADGEALVKRFKNSL---KWYHFDHNDKKLAMSSAARNIQHLLYGKRFFPYY 125
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
TIIAGLD EGKG VYS+DP+G ER RAGG++ +L+ LDNQV
Sbjct: 126 VHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGT-- 183
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
D + R + L+ +E+AI +V+DAFT+A ER
Sbjct: 184 --------DGKVKRPLKYLT---------------------IEEAIKLVRDAFTSATERH 214
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
I+ GDG+ + +TKDG+++ F L++D
Sbjct: 215 IHVGDGLEILIVTKDGVRKEFFELKRD 241
>gi|255714573|ref|XP_002553568.1| KLTH0E01826p [Lachancea thermotolerans]
gi|238934950|emb|CAR23131.1| KLTH0E01826p [Lachancea thermotolerans CBS 6340]
Length = 242
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 145/264 (54%), Gaps = 38/264 (14%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HY 62
+ ++ TPI+H F+PYSDNGGT + +AG D+A++A DTR + Y+I +R + K+FD
Sbjct: 10 SNEVKNTPIEHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDN 69
Query: 63 YYRPTYNFLMIFTITILPFQ----MYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTST 117
F + FQ Y +HN K +S S A+ I ++YGKRFFPYY T
Sbjct: 70 ILISANGFAADGNALVKRFQNSLKWYHFDHNDKKLSMRSAARNIQHLLYGKRFFPYYVHT 129
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
IIAGLD EGKG VYS+DP+G ER RAGG++ +L+ LDNQV ++ G
Sbjct: 130 IIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNF---KNQYEPDSHG 186
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
R H LT +E+ + +V+DAF++A ER I+
Sbjct: 187 TKRKHVKFLT----------------------------VEEVVQLVRDAFSSATERHIHV 218
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDGV + +TK+G+++ F L++D
Sbjct: 219 GDGVEILIVTKEGVRKEFFELKRD 242
>gi|344229599|gb|EGV61484.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 242
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 143/266 (53%), Gaps = 54/266 (20%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTY 68
TPI+H F+PYSDNGGT + +AG D+A++A DTR GY+I +R + K+F+
Sbjct: 16 TPIEHRFNPYSDNGGTVLGIAGKDFAVLAGDTRHVEGYSINSRYEPKIFNVGDDIVMTAN 75
Query: 69 NFLMIFTITILPFQ----MYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
F I F+ Y +HN K S S A+ I ++YGKRFFPYY ST+IAGLD
Sbjct: 76 GFAADGKALINSFKTQLKWYKFDHNDKRFSIQSAARYIRHLLYGKRFFPYYVSTLIAGLD 135
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHD 183
EGKGCVYS+DP+G ER RAGGS+ +L+ LDNQV
Sbjct: 136 DEGKGCVYSFDPVGSYEREQCRAGGSASSLIMPFLDNQV--------------------- 174
Query: 184 LALTREINALSSKLTILLGFRNQENVD-----KTP---VPLEKAISVVKDAFTAAAERDI 235
F+NQ D K P + L++ + +VKDAF++A ER I
Sbjct: 175 ------------------NFKNQYEPDSDGKVKKPLRYLELDEVLELVKDAFSSATERHI 216
Query: 236 YTGDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +TK+G++ FPL++D
Sbjct: 217 QVGDGLEIHIVTKEGVRVEYFPLKRD 242
>gi|367020378|ref|XP_003659474.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
42464]
gi|347006741|gb|AEO54229.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
42464]
Length = 265
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 142/267 (53%), Gaps = 44/267 (16%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYN 69
E +H F PY+DNGG+T+A+AG D+ ++A DTRLS+GY+I +R+ KLF
Sbjct: 28 EGAREHRFEPYADNGGSTLAIAGADFTVMAGDTRLSSGYSINSRQHPKLFKIGGTTADQK 87
Query: 70 FLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYY 114
I ++++ F +MY + H K MS + A+ +S ++Y KRFFPYY
Sbjct: 88 DATI-VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYY 146
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
T I+ GLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 147 THAILGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQV------------ 194
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
+ + + E +AL + + P+ + +VKDAF A ER
Sbjct: 195 ---NFKNQYVPNSGEGHALQER-------------KRRPLTRSEVEVLVKDAFDGAVERH 238
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
I GDG+ + ITKDGI+E PL+KD
Sbjct: 239 IEVGDGLQIMTITKDGIEEITLPLKKD 265
>gi|168046657|ref|XP_001775789.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672796|gb|EDQ59328.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 137/253 (54%), Gaps = 45/253 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTI 76
+SPY +NGGT VA+AG DY +IA+DTR+S G++I TR+ SK+ H F
Sbjct: 14 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKI--HQITEKCVLASSGFQA 71
Query: 77 TILPF--------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
+ Q+Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD EGKG
Sbjct: 72 DVRSLQKNLDARHQIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKG 131
Query: 129 CVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
CVY+YD +G ER+ + + GS L+ +LDNQ
Sbjct: 132 CVYTYDAVGSYERSGYSSQGSGQTLIMPVLDNQ--------------------------- 164
Query: 189 EINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
L S ++L R TP+ +A+ ++KD F +AAERDIYTGDGV + I K
Sbjct: 165 ----LKSASPLVLPPRES----STPLTENEAVDLIKDTFASAAERDIYTGDGVEIVIINK 216
Query: 249 DGIKEYNFPLRKD 261
DGI+ PL++D
Sbjct: 217 DGIRRETMPLKRD 229
>gi|377834609|ref|XP_003689507.1| PREDICTED: proteasome subunit beta type-1-like [Mus musculus]
Length = 276
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 143/259 (55%), Gaps = 56/259 (21%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P+ FSPY+ NGG +A+AG D++I+ASDTRLS ++I+TR+ K Y+ T +
Sbjct: 24 PVXLRFSPYAFNGGPVLAIAGEDFSIVASDTRLSEEFSIHTRDSPKC-----YKLTDKTV 78
Query: 72 M--------IFTIT-ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ T+T I+ ++ + NK M T ++A M+S + +RFFPYY II GL
Sbjct: 79 IGCSGFHGDCLTLTKIIETRLKM---NKAMRTGAVAAMLSTIPCSRRFFPYYVYNIIGGL 135
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D EGKG VYS+DP+G +R + +AG S+ A LQ LL NQ
Sbjct: 136 DEEGKGAVYSFDPVGSYQRDSVKAGASASATLQPLLHNQT-------------------- 175
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
GFR ++V+ P L++A+ +VKD F +AAERD+YTGD +
Sbjct: 176 -------------------GFRRMQSVEHVPRILDRAMRLVKDVFISAAERDVYTGDALR 216
Query: 243 LCAITKDGIKEYNFPLRKD 261
+C +TK+GI+E PLRKD
Sbjct: 217 ICIVTKEGIREETVPLRKD 235
>gi|397610458|gb|EJK60845.1| hypothetical protein THAOC_18741 [Thalassiosira oceanica]
Length = 283
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 141/266 (53%), Gaps = 58/266 (21%)
Query: 8 ILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
+ + P + FSPY NGGTT+A++GPDYA++A+DTRLS+GY I +R SKL P
Sbjct: 64 VTQAPYERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKL------HPL 117
Query: 68 YNFLMIFTI----------TILPFQM--YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYT 115
++ + ++L +M Y H H K M+T S+A+M+ +Y KRFFPYY+
Sbjct: 118 TGRCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKPMATPSVAQMLGNTLYYKRFFPYYS 177
Query: 116 STIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSV 175
++AG+D EGKG VYSYD IG ER F A GS + L L+DN +I H +
Sbjct: 178 FNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQSFLIPLMDN---VISHKN------ 228
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDI 235
R E D +P E+ + +VKDAF A ERDI
Sbjct: 229 ----------------------------RLDERRD---LPAEEVVEIVKDAFLTAGERDI 257
Query: 236 YTGDGVHLCAITKDGIKEYNFPLRKD 261
YTGD V + ITKDGI + F L+ D
Sbjct: 258 YTGDAVDIMVITKDGIDKQTFQLKAD 283
>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
Length = 730
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 141/254 (55%), Gaps = 46/254 (18%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+ FSPY+ NGG +A+AG D++I+ASDTRLS ++I+TR+ K + D +
Sbjct: 24 PVXLRFSPYAFNGGPVLAIAGEDFSIVASDTRLSEEFSIHTRDSPKCYKLTDKTVIGCSG 83
Query: 69 NFLMIFTIT-ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
T+T I+ ++ + NK M T ++A M+S + +RFFPYY II GLD EGK
Sbjct: 84 FHGDCLTLTKIIETRLKM---NKAMRTGAVAAMLSTIPCSRRFFPYYVYNIIGGLDEEGK 140
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G VYS+DP+G +R + +AG S+ A LQ LL NQ
Sbjct: 141 GAVYSFDPVGSYQRDSVKAGASASATLQPLLHNQT------------------------- 175
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
GFR ++V+ P L++A+ +VKD F +AAERD+YTGD + +C +T
Sbjct: 176 --------------GFRRMQSVEHVPRILDRAMRLVKDVFISAAERDVYTGDALRICIVT 221
Query: 248 KDGIKEYNFPLRKD 261
K+GI+E PLRKD
Sbjct: 222 KEGIREETVPLRKD 235
>gi|50287473|ref|XP_446166.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525473|emb|CAG59090.1| unnamed protein product [Candida glabrata]
Length = 242
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 148/260 (56%), Gaps = 44/260 (16%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---------HY 62
PI+H F+PYSDNGGT + +AG D+A++A DTR + Y+I +R + K+FD +
Sbjct: 17 PIEHRFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIIMSANG 76
Query: 63 YYRPTYNFLMIFTITILPFQMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+ + F +I + Y +HN K +S +S A+ I ++YGKRFFPYY TIIAG
Sbjct: 77 FAADGEALVKRFKNSI---KWYHFDHNDKKLSISSAARNIQHLLYGKRFFPYYVHTIIAG 133
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
LD EGKG VYS+DP+G ER RAGG++ +L+ LDNQV + + V G
Sbjct: 134 LDDEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNF------KNQYVPGT--- 184
Query: 182 HDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGV 241
D + RE+ LS LE+ I +V+DAFT+A ER I+ GDG+
Sbjct: 185 -DGKVKRELKYLS---------------------LEEVIKLVRDAFTSATERHIHVGDGL 222
Query: 242 HLCAITKDGIKEYNFPLRKD 261
+ +TK+G++ F L++D
Sbjct: 223 EILIVTKEGVRTEFFELKRD 242
>gi|261201302|ref|XP_002627051.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239592110|gb|EEQ74691.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239611727|gb|EEQ88714.1| proteasome component C5 [Ajellomyces dermatitidis ER-3]
gi|327348257|gb|EGE77114.1| proteasome component C5 [Ajellomyces dermatitidis ATCC 18188]
Length = 266
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 145/265 (54%), Gaps = 41/265 (15%)
Query: 12 PIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF----DHYYYRP 66
P QHH F+PY+DNGG+T+ +AG DYAI+A DTR +GYNI TR KLF D+
Sbjct: 28 PKQHHGFNPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEDNEGGEG 87
Query: 67 TYNFLMIFTITI----------LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
+ L + +MY + H K MS + A+ ++ ++Y KRFFPYY
Sbjct: 88 AHLVLSVVGFAADGRALKERLDAIVKMYKYRHGKPMSVKACAQRLATILYSKRFFPYYVH 147
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
I+AG+D EGKG +YSYDP+G ER RA G++ +L+ LDNQV
Sbjct: 148 AILAGIDEEGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQV-------------- 193
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
+ + + E NA+ +++ + P P + A+ +VKDAFT+A ER I
Sbjct: 194 -NFKNQFIPGSGEGNAM-----------DKQPREPVPPPRDVALQLVKDAFTSAVERHIE 241
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + IT +GI+E + PL+KD
Sbjct: 242 VGDGLQVMVITTEGIQEVHHPLKKD 266
>gi|407921854|gb|EKG14992.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 266
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 144/263 (54%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F+PY+DNGG+T+ ++G D+ IIA DTR ++GYNI TR Q KLF P N
Sbjct: 33 QHAFNPYTDNGGSTLGISGKDFTIIAGDTRSTSGYNINTRYQPKLFKIGGEGPD-NEGAT 91
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS ++ A+ +S ++YGKRFFPYY I
Sbjct: 92 IVLSVVGFAADGAALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYGKRFFPYYVHAI 151
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EG+G +YSYDP+G ER RAGG++ +L+ LDNQV + + + G
Sbjct: 152 LGGLDEEGRGALYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF------KNQYIPGS 205
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
H L E + P+P + ++V DAF++A ER I G
Sbjct: 206 GVGHAL----------------------EERPRDPLPRDHVEALVHDAFSSAVERHIEVG 243
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + IT+DGI+E L+KD
Sbjct: 244 DGLQMMIITRDGIQEVYKELKKD 266
>gi|156036420|ref|XP_001586321.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154698304|gb|EDN98042.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 264
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 147/264 (55%), Gaps = 45/264 (17%)
Query: 14 QHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QHH F PY+DNGG+T+A++G D+ I+A DTR ++GYNI TR Q K+F + +
Sbjct: 30 QHHGFYPYTDNGGSTLAISGSDFTIVAGDTRSTSGYNINTRYQPKVFKIGGTTASQDDAT 89
Query: 73 IFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
+ ++++ F +MY ++H K MS + A+ ++ ++Y KRFFPYY +
Sbjct: 90 L-VLSVVGFAADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTA 148
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
I+ GLD EGKG VYSYDP+G ER RA G++ +L+ LDNQV + + + G
Sbjct: 149 ILGGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNF------KNQYIPG 202
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
H+LA RE K P+P + +VKDAF +A ER I
Sbjct: 203 SGVGHELA-ERE---------------------KIPLPRNEVEDLVKDAFDSAVERHIEV 240
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + ITKDGI+E PL++D
Sbjct: 241 GDGLQMLIITKDGIEEIYKPLKRD 264
>gi|440796014|gb|ELR17123.1| proteasome subunit protein, putative [Acanthamoeba castellanii str.
Neff]
Length = 236
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 138/251 (54%), Gaps = 44/251 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPT---YNF 70
+SPY+DNGGTT+A+ G D+ ++A+DTRLS GY+I++RE K L D +
Sbjct: 24 WSPYTDNGGTTLALHGKDFCVVAADTRLSTGYSIHSREARKVLKLTDKCVIATAGMQADQ 83
Query: 71 LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
L + + Q Y H+H K MST ++A+M++ ++Y KRFFP+YT ++ G+D G GCV
Sbjct: 84 LALHKLLQTRLQWYEHQHRKPMSTPAIAQMLATILYSKRFFPFYTFNVLGGVDDNGVGCV 143
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
YSYD +G ER + + G+ L+Q LLDNQ+G + + K E+
Sbjct: 144 YSYDAVGSFERVKYSSSGTGNQLVQPLLDNQIGWKDQRATKTKP--------------EL 189
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
N +E+ + V+D FT+A ERDIYTGD V + I KDG
Sbjct: 190 N------------------------VEETVDFVRDIFTSAGERDIYTGDYVLIAVIDKDG 225
Query: 251 IKEYNFPLRKD 261
+KE F L++D
Sbjct: 226 VKEMKFDLKQD 236
>gi|295672922|ref|XP_002797007.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282379|gb|EEH37945.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 266
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 144/275 (52%), Gaps = 41/275 (14%)
Query: 2 ALVTKQILETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF- 59
+ +Q P HH F+PY+DNGG+T+ +AG DYAI+A DTR GY+I TR KLF
Sbjct: 18 SFAEQQSNAAPKHHHGFNPYTDNGGSTLGIAGEDYAILAGDTRSVTGYSINTRYSPKLFK 77
Query: 60 ---DHYYYRPTYNFLMIFTITI----------LPFQMYLHEHNKVMSTTSLAKMISIMMY 106
D + L + +MY ++H K MS + A+ +S ++Y
Sbjct: 78 IGEDDEGGEGAHLVLSVVGFAADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTILY 137
Query: 107 GKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQ 166
KRFFPYY I+ G+D +GKG +YSYDP+G ER RA G++ +L+ LDNQV
Sbjct: 138 SKRFFPYYVHAILGGIDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQV---- 193
Query: 167 HSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDA 226
+ +A T E NAL +++ + P P E A+ +V DA
Sbjct: 194 -----------NFKNQYVAGTGEGNAL-----------DKQPREPQPQPAEDALQLVNDA 231
Query: 227 FTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
FT+A ER I GDG+ + ITKDGI E PL+KD
Sbjct: 232 FTSAVERHIEVGDGLQIMLITKDGIMEMYHPLKKD 266
>gi|361131660|gb|EHL03312.1| putative proteasome component C5 [Glarea lozoyensis 74030]
Length = 263
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 144/263 (54%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F PY+DNGG+T+A++G D+ IIA DTR ++GYNI TR K+F + + +
Sbjct: 30 EHSFYPYTDNGGSTLAISGNDFTIIAGDTRSTSGYNINTRYSPKVFKIGGTTSSQDDATL 89
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++YGKRFFPYY + I
Sbjct: 90 -VLSVVGFAADGAALKERLDAIVKMYRYQHGKPMSVKACAQRLSTILYGKRFFPYYVTAI 148
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EGKG VYSYDP+G ER RA G++ +L+ LDNQV + + + + G
Sbjct: 149 LGGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQV------NYKNQYIPGS 202
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
H L + +K P+P + +VKDAF +A ER I G
Sbjct: 203 GEGHAL----------------------QEREKIPLPRNEVEDLVKDAFDSAVERHIEVG 240
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + ITK GI+E PL+KD
Sbjct: 241 DGLQMLIITKSGIEEKYLPLKKD 263
>gi|340517495|gb|EGR47739.1| proteosome beta subunit protease [Trichoderma reesei QM6a]
Length = 264
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 145/273 (53%), Gaps = 44/273 (16%)
Query: 4 VTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYY 63
V K P QH F+PYSDNGG+T+A++G D+ I+A DTR ++GY+I +R K+F
Sbjct: 21 VPKTAHGEPRQHRFNPYSDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMAPKVFKIGG 80
Query: 64 YRPTYNFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGK 108
T I +++ F ++Y + H K MS + AK +S ++Y K
Sbjct: 81 TTATQEDATI-VLSVCGFAADGEALRDRLDTVCKIYRYRHGKPMSLNACAKRLSTILYQK 139
Query: 109 RFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHS 168
RFFPYYT ++ GLD EGKG VYSYDP+G ER RAGG++G+L+ LDNQV
Sbjct: 140 RFFPYYTHAMLGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNF---- 195
Query: 169 SKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFT 228
+ + + G H+L + ++ P+ + ++VKDAF
Sbjct: 196 --KNQYIPGSGEGHEL----------------------KERERRPLTRPEVETLVKDAFD 231
Query: 229 AAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
A ER I GD + + ITKDGI+E PL+KD
Sbjct: 232 GAVERHIEVGDSLQMLIITKDGIEEVFLPLKKD 264
>gi|350296725|gb|EGZ77702.1| proteasome component C5 [Neurospora tetrasperma FGSC 2509]
Length = 265
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 141/267 (52%), Gaps = 44/267 (16%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYN 69
E QH F PY+DNGG+T+A+AG D+ I+A DTRL++GY+I +R KLF
Sbjct: 28 EGARQHRFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLFKIGGTTADQK 87
Query: 70 FLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYY 114
I ++++ F +MY + H K MS + A+ +S ++Y KRFFPYY
Sbjct: 88 DATI-VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYY 146
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
I+ GLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV Q +
Sbjct: 147 VYAILGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----KNQYEP 202
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
G +G QE ++ P+ + +VKDAF A ER
Sbjct: 203 GSG-----------------------VGHALQER-ERKPLTRSEGEVLVKDAFDGAVERH 238
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
I GDG+ + ITKDGI+E + PL+KD
Sbjct: 239 IEVGDGLQMMVITKDGIEEVSLPLKKD 265
>gi|238881595|gb|EEQ45233.1| proteasome component C5 [Candida albicans WO-1]
Length = 244
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 147/274 (53%), Gaps = 59/274 (21%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---- 60
+ +I PI+H F+PYSDNGGT + +AG D+A++A DTR GY+I +R +SK+ D
Sbjct: 13 SSEIQTVPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDD 72
Query: 61 -----HYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYT 115
+ + + F +++ ++ + K ++ S A+ I ++YGKRFFP Y
Sbjct: 73 ILMTANGFAADGVALIDRFKQSLIWYK--FDNNGKKLAIKSAARYIQQLLYGKRFFP-YV 129
Query: 116 STIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSV 175
ST+IAGLD EGKG VYSYDP+G ER RA G++ +L+ LDNQV
Sbjct: 130 STLIAGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQV------------- 176
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQ-----ENVDKTPVP---LEKAISVVKDAF 227
F+NQ + +K P+ LE+ I +V+DAF
Sbjct: 177 --------------------------NFKNQFVPGTDGKEKKPLKFLTLEEVIQLVRDAF 210
Query: 228 TAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
T+A ER IY GDG+ + +TKDGI+ +PL++D
Sbjct: 211 TSAGERHIYVGDGLEIKIVTKDGIRTEYYPLKRD 244
>gi|154308528|ref|XP_001553600.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347826621|emb|CCD42318.1| similar to proteasome subunit beta type-1-A [Botryotinia
fuckeliana]
Length = 264
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 45/264 (17%)
Query: 14 QHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QHH F PY+DNGG+T+A++G D+ I+A DTR ++GYNI TR Q K+F +
Sbjct: 30 QHHGFYPYTDNGGSTLAISGSDFTIVAGDTRSTSGYNINTRYQPKVFKIGGTTAAQDDAT 89
Query: 73 IFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
+ ++++ F +MY ++H K MS + A+ ++ ++Y KRFFPYY +
Sbjct: 90 L-VLSVVGFAADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTA 148
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
I+ GLD EGKG VYSYDP+G ER RA G++ +L+ LDNQV + + + G
Sbjct: 149 ILGGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNF------KNQYIPG 202
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
H LA RE K P+P ++ +VKDAF +A ER I
Sbjct: 203 SGEGHALA-ERE---------------------KIPLPRKEVEDLVKDAFDSAVERHIEV 240
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + ITK+GI+E PL++D
Sbjct: 241 GDGLQMLIITKEGIEEIYKPLKRD 264
>gi|428182497|gb|EKX51358.1| 20S proteasome subunit beta type 1 [Guillardia theta CCMP2712]
Length = 230
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 140/265 (52%), Gaps = 46/265 (17%)
Query: 3 LVTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD-- 60
L T Q+ E P + FSPY +NGGT +A+AG D+ IIA+D+RLS GY+I +R K+
Sbjct: 6 LPTSQV-EQPKESRFSPYQNNGGTCLALAGADFCIIAADSRLSLGYSILSRNTPKVAQLT 64
Query: 61 --HYYYRPTYNFLMIFTITILPF--QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
N M+ L F QMYLH+H K MST ++A+M++ +Y +RFFPYYT
Sbjct: 65 TKTCIASSGCNADMVTLQKYLKFKIQMYLHQHGKEMSTPAVAQMLATTLYHRRFFPYYTF 124
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
I+ GLD G+GCV+SYD IG ER + GS AL++ LDN
Sbjct: 125 NIVGGLDQNGEGCVFSYDAIGCFERLKYTVSGSGHALIEPFLDN---------------- 168
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
L+ ++N +N ++ + +VKD F++A ERDIY
Sbjct: 169 -----------------------LVAYKNTDNKPTIERSCDETLELVKDIFSSAGERDIY 205
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
TGD V + I K+G + FPL+KD
Sbjct: 206 TGDFVDIYIIDKNGTRYEQFPLKKD 230
>gi|225554384|gb|EEH02683.1| proteasome component C5 [Ajellomyces capsulatus G186AR]
Length = 266
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 145/276 (52%), Gaps = 43/276 (15%)
Query: 2 ALVTKQILETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD 60
+ Q P QHH F PY+DNGG+T+ +AG DYAI+A DTR +GYNI TR KLF
Sbjct: 18 SFAEPQTTAGPKQHHGFYPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFK 77
Query: 61 HYYYRPTYNFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMM 105
++++ F +MY ++H K MS + A+ ++ ++
Sbjct: 78 -IGEGDEGGEGAHLVLSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATIL 136
Query: 106 YGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGII 165
Y KRFFPYY I+AG+D +GKG +YSYDP+G ER RA G++ +L+ LDNQV
Sbjct: 137 YSKRFFPYYVHAILAGMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQV--- 193
Query: 166 QHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKD 225
+ L + E NA+ +++ P P + A+ +V D
Sbjct: 194 ------------NFKNQYLPGSGEGNAM-----------DKQPRPSEPPPRDVALQLVND 230
Query: 226 AFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
AFT+A ER I GDG+ + IT++GI+E PL+KD
Sbjct: 231 AFTSAVERHIEVGDGLQVMVITREGIQEIYHPLKKD 266
>gi|403216524|emb|CCK71021.1| hypothetical protein KNAG_0F03590 [Kazachstania naganishii CBS
8797]
Length = 248
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 52/266 (19%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRP 66
+ PI+H F+PYSDNGGT + +AG D+A++A DTR + Y+I +R +SK+FD
Sbjct: 22 MSQPIEHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRSESKVFDVGDGIVIS 81
Query: 67 TYNFLMIFTITILPFQ-----MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
F T + F+ + +E+ K +S ++ A+ I ++YGKRFFPYY TIIAG
Sbjct: 82 ANGFAADSTALVKRFRNSLKWYHFNENEKRLSLSAAARNIQHLLYGKRFFPYYVHTIIAG 141
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
LD EGKG VYS+DP+G ER RAGG++ +L+ LDNQV
Sbjct: 142 LDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQV------------------- 182
Query: 182 HDLALTREINALSSKLTILLGFRNQ---ENVDKTPV---PLEKAISVVKDAFTAAAERDI 235
F+NQ +K P+ +E+ + +V+D+FT+A ER I
Sbjct: 183 --------------------NFKNQYVPGTGEKRPITYLSVEEVVKLVRDSFTSATERHI 222
Query: 236 YTGDGVHLCAITKDGIKEYNFPLRKD 261
+ GDG+ + +TKDG++ L++D
Sbjct: 223 HVGDGLEILIVTKDGVRREYHELKRD 248
>gi|240273184|gb|EER36706.1| proteasome component [Ajellomyces capsulatus H143]
gi|325089210|gb|EGC42520.1| proteasome component [Ajellomyces capsulatus H88]
Length = 266
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 145/276 (52%), Gaps = 43/276 (15%)
Query: 2 ALVTKQILETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD 60
+ Q P QHH F PY+DNGG+T+ +AG DYAI+A DTR +GYNI TR KLF
Sbjct: 18 SFAEPQTATGPKQHHGFYPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFK 77
Query: 61 HYYYRPTYNFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMM 105
++++ F +MY ++H K MS + A+ ++ ++
Sbjct: 78 -IGEGDEGGEGAHLVLSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATIL 136
Query: 106 YGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGII 165
Y KRFFPYY I+AG+D +GKG +YSYDP+G ER RA G++ +L+ LDNQV
Sbjct: 137 YSKRFFPYYVHAILAGMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQV--- 193
Query: 166 QHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKD 225
+ L + E NA+ +++ P P + A+ +V D
Sbjct: 194 ------------NFKNQYLPGSGEGNAM-----------DKQPRPSEPPPRDVALQLVND 230
Query: 226 AFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
AFT+A ER I GDG+ + IT++GI+E PL+KD
Sbjct: 231 AFTSAVERHIEVGDGLQVMVITREGIQEIYHPLKKD 266
>gi|126274560|ref|XP_001387579.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213449|gb|EAZ63556.1| proteasome subunit [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 141/264 (53%), Gaps = 38/264 (14%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HY 62
+ +I PI+H F+PYSDNGGT + +AG D+A++A DTR GY+I +R Q K+F+
Sbjct: 10 SSEIHSVPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYQPKVFNVGDD 69
Query: 63 YYRPTYNFLMIFTITILPF----QMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTST 117
F I F Q Y +H K ++ S A+ I ++YGKRFFPYY ST
Sbjct: 70 IVMTANGFAADGAALIDRFKNQLQWYKFDHGGKKLNIKSAARYIQHLLYGKRFFPYYVST 129
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
+IAGLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 130 LIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEP------- 182
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
D RE+ L+ L++ + +V+DAF++A ER I
Sbjct: 183 ---GSDGKKKRELRYLT---------------------LDEVLELVRDAFSSATERHIQV 218
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +TK+G++ F L++D
Sbjct: 219 GDGLEILIVTKEGVRTEYFDLKRD 242
>gi|444321340|ref|XP_004181326.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
gi|387514370|emb|CCH61807.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
Length = 241
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 147/275 (53%), Gaps = 60/275 (21%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---- 60
+ ++ TPIQH F+PYSDNGGT + +AG D+A++A DTR Y+I +R + K+FD
Sbjct: 9 SSEVHYTPIQHQFNPYSDNGGTILGIAGEDFAVLAGDTRNITDYSINSRFEPKVFDCGDN 68
Query: 61 -----HYYYRPTYNFLMIFTITILPFQMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYY 114
+ + + F +I + Y +HN K ++ S A+ I ++YGKRFFPYY
Sbjct: 69 IVISANGFAADGEALVQRFKNSI---KWYHFDHNDKKLTMKSAARNIQHLLYGKRFFPYY 125
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
TIIAGLD EGKG VYS+DP+G ER RAGG++ +L+ LDNQV
Sbjct: 126 VHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQV------------ 173
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQ---ENVDKTPVPL-----EKAISVVKDA 226
F+NQ E+ K PL ++ I +V+DA
Sbjct: 174 ---------------------------NFKNQYVPESNGKVKRPLKYLTIDECIKLVRDA 206
Query: 227 FTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
FT+A ER I GDG+ + +TKDG+++ F L++D
Sbjct: 207 FTSATERHIQVGDGLEILIVTKDGVRKEYFDLKRD 241
>gi|149237248|ref|XP_001524501.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452036|gb|EDK46292.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 243
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 147/277 (53%), Gaps = 65/277 (23%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYY 64
+ ++ PI+H F+PYSDNGGT + +AG D+A++A DTR GY+I +R + ++ +
Sbjct: 12 SAEVHSVPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPRV-----H 66
Query: 65 RPTYNFLMIFT------ITIL-----PFQMY-LHEHNKVMSTTSLAKMISIMMYGKRFFP 112
N LM + ++ F+ Y N+ + +S A+ I ++YGKRFFP
Sbjct: 67 NVGDNILMTANGFAADGVALIDRFKQSFKWYKFDNENRKLEISSAARYIQHLLYGKRFFP 126
Query: 113 YYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQM 172
Y ST+IAGLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 127 Y-VSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQV---------- 175
Query: 173 KSVLGGIRTHDLALTREINALSSKLTILLGFRNQ-----ENVDKTP---VPLEKAISVVK 224
F+NQ + +K P + LE+ I +V+
Sbjct: 176 -----------------------------NFKNQYVPGTDGKEKKPLKYLSLEEVIQLVR 206
Query: 225 DAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
DAFT+A ER IY GDG+ + +TKDG++ FPL++D
Sbjct: 207 DAFTSAGERHIYVGDGLEIMIVTKDGVRTEYFPLKRD 243
>gi|395738001|ref|XP_003777017.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pongo abelii]
Length = 205
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 131/250 (52%), Gaps = 69/250 (27%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P+Q FSPY NGGT V G +G++ + L
Sbjct: 25 PLQLRFSPYVFNGGTDKTVIG------------CSGFH------------------GDCL 54
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+ I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD EGKG VY
Sbjct: 55 TLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVY 114
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
S+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 115 SFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------------- 145
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI
Sbjct: 146 ----------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 195
Query: 252 KEYNFPLRKD 261
+E PLRKD
Sbjct: 196 REETVPLRKD 205
>gi|156847580|ref|XP_001646674.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
gi|156117353|gb|EDO18816.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
Length = 242
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 145/264 (54%), Gaps = 42/264 (15%)
Query: 7 QILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD------ 60
++ PI+H F+PYSDNGGT + +AG D+A++A DTR + Y+I +R + K+FD
Sbjct: 12 EVKNVPIEHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIV 71
Query: 61 ---HYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
+ + + F +I + + ++K +S +S A+ I ++YGKRFFPYY T
Sbjct: 72 ISANGFAADGEALVKRFKNSIKWY--HFDNNDKTLSLSSAARNIQHLLYGKRFFPYYVHT 129
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
IIAGLD EGKG VYS+DP+G ER RAGG++ +L+ LDNQV
Sbjct: 130 IIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPDS----- 184
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
D + R + LS +++ I +V+DAFT+A ER I+
Sbjct: 185 -----DGTVKRPLKFLS---------------------IDEVIRLVRDAFTSATERHIHV 218
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +TKDG+++ + L++D
Sbjct: 219 GDGLEILIVTKDGVRKEFYELKRD 242
>gi|225714644|gb|ACO13168.1| Proteasome subunit beta type-1 precursor [Lepeophtheirus salmonis]
Length = 238
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 138/257 (53%), Gaps = 45/257 (17%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPT 67
P Q F PY DNGGTT+ +AG D+ +IASDTRL Y+I +R+ K+FD + +
Sbjct: 21 NPHQVSFQPYQDNGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGAS 80
Query: 68 YNFLMIFTITILP---FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
+ + T + + Y + H K MST++LA+M+SI +Y KRFFPYY ++AGLD
Sbjct: 81 GCWCDVLTFVRVAESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGLDD 140
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EG+G +++YDP+GH E+ GG+S ++Q +LDN +I+
Sbjct: 141 EGRGAIFTYDPVGHCEKVKISCGGASMEMIQPILDN---VIEK----------------- 180
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
+N N + + +++ +++V D F +AAER I TGDGV
Sbjct: 181 -------------------KNMTNAELVDLSIDETVNIVHDCFISAAERQIQTGDGVVFK 221
Query: 245 AITKDGIKEYNFPLRKD 261
ITKDGI+ LR+D
Sbjct: 222 IITKDGIETKRVGLRRD 238
>gi|224067752|ref|XP_002302536.1| predicted protein [Populus trichocarpa]
gi|118484887|gb|ABK94310.1| unknown [Populus trichocarpa]
gi|222844262|gb|EEE81809.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 137/262 (52%), Gaps = 51/262 (19%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
T Q F PY NGGT VA+AG DY ++A+DTR+S GYNI TR+ SK+ Y+
Sbjct: 2 TKQQARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKI-----YKLADKC 56
Query: 71 LMI---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
LM F + Q +Y H+HNK MS ++A+++S +Y KRFFPYYT ++
Sbjct: 57 LMASSGFQADVRALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVL 116
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
G D EGKGCVY+YD +G E+ + A GS L+ +LDNQ
Sbjct: 117 VGFDEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPVLDNQ------------------ 158
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
L S +LL Q+ V TP+ +AI VVKD F +A ERDIYTGD
Sbjct: 159 -------------LKSPSPLLLP--AQDAV--TPLSEAEAIDVVKDVFASATERDIYTGD 201
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
+ + + DG++ LRKD
Sbjct: 202 KLEIVILNADGMRREYAELRKD 223
>gi|164422783|ref|XP_963776.2| proteasome component C5 [Neurospora crassa OR74A]
gi|157069819|gb|EAA34540.2| proteasome component C5 [Neurospora crassa OR74A]
Length = 265
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 140/267 (52%), Gaps = 44/267 (16%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYN 69
E QH F PY+DNGG+T+A+AG D+ I+A DTRL++GY+I +R KLF
Sbjct: 28 EGARQHRFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLFKIGGTTADQK 87
Query: 70 FLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYY 114
I ++++ F +MY + H K MS + A+ +S ++Y KRFFPYY
Sbjct: 88 DATI-VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYY 146
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
I+ GLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV Q +
Sbjct: 147 VYAILGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----KNQYEP 202
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
G +G QE ++ P+ + +VKDAF A ER
Sbjct: 203 GSG-----------------------VGHALQER-ERKPLTRSEGEVLVKDAFDGAVERH 238
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
I GDG+ + ITKDGI+E PL+KD
Sbjct: 239 IEVGDGLQMMVITKDGIEEVLLPLKKD 265
>gi|410075834|ref|XP_003955499.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
gi|372462082|emb|CCF56364.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
Length = 241
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 148/267 (55%), Gaps = 44/267 (16%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---- 60
+ ++ + PI+H F+PYSDNGGT + +AG D+A++A DTR + Y+I +R + K+FD
Sbjct: 9 SNEVAQQPIEHRFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDN 68
Query: 61 -----HYYYRPTYNFLMIFTITILPFQMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYY 114
+ + + F +I + Y +HN K +S S A+ I ++YGKRFFPYY
Sbjct: 69 IVISANGFAADGEALVKRFKNSI---KWYHFDHNDKKLSIKSAARNIQHLLYGKRFFPYY 125
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
TIIAGLD EGKG VYS+DP+G ER RAGG++ +L+ LDNQV
Sbjct: 126 VHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEP---- 181
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
D + R + L+ +++ IS+V+DAFT+A ER
Sbjct: 182 ------GSDGKVKRPLKYLN---------------------IDEVISLVRDAFTSATERH 214
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
I+ GDG+ + +TK+G+++ + L++D
Sbjct: 215 IHVGDGLEILIVTKEGVRKEYYDLKRD 241
>gi|406862546|gb|EKD15596.1| proteasome component C5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 264
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 144/263 (54%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+A++G D+ I+A DTR ++GYNI TR K+F + + +
Sbjct: 31 QHGFYPYTDNGGSTLAISGADFTIMAGDTRSTSGYNINTRYAPKVFKIGGTTSSQDDATL 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++YGKRFFPYY + I
Sbjct: 91 -VLSVVGFAADGEALKERLDAVVKMYRYQHGKPMSVKACAQRLSTILYGKRFFPYYVTAI 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EG+G VYSYDP+G ER RA G++ +L+ LDNQV + + + G
Sbjct: 150 LGGLDEEGRGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNF------KNQYIPGS 203
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
H L + +K P+P + +VKDAF +A ER I G
Sbjct: 204 GIGHAL----------------------QEREKLPLPRSEVEDLVKDAFDSAVERHIEVG 241
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + +TK+GI+E PL+KD
Sbjct: 242 DGLQMLIVTKNGIEEIYKPLKKD 264
>gi|452980444|gb|EME80205.1| hypothetical protein MYCFIDRAFT_49844 [Pseudocercospora fijiensis
CIRAD86]
Length = 263
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 147/272 (54%), Gaps = 48/272 (17%)
Query: 7 QILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRP 66
Q P QH F PY+DNGG+T+ ++G D+ I+A DTR ++GYNI TR KLF P
Sbjct: 23 QDRSAPRQHGFYPYTDNGGSTLGISGEDFTILAGDTRSTSGYNINTRYAPKLFKIGGEGP 82
Query: 67 TYNFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFF 111
+ I ++++ F +MY ++H K +S + A+ +S ++YGKRFF
Sbjct: 83 DHVGAKI-VLSVVGFAADGNALKERLDTIVKMYKYQHGKDISIGACAQRLSHILYGKRFF 141
Query: 112 PYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQ 171
PYY + I+ G+D EGKG +YSYDP+G ER R+ G++ +L+ LDNQV +
Sbjct: 142 PYYVTAILGGIDEEGKGALYSYDPVGSYEREQCRSAGAASSLITPFLDNQVNLKNQ---- 197
Query: 172 MKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKA--ISVVKDAFTA 229
HD + +N T L+ P PL +A +VKDAFT+
Sbjct: 198 ----------HDPQAPQGLNK-----TALV-----------PRPLSRAHVEDLVKDAFTS 231
Query: 230 AAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
A ER I GDG+ + IT+DGI+E PL+KD
Sbjct: 232 AVERHIEVGDGLQMMIITRDGIQETYSPLKKD 263
>gi|115400894|ref|XP_001216035.1| proteasome component C5 [Aspergillus terreus NIH2624]
gi|114189976|gb|EAU31676.1| proteasome component C5 [Aspergillus terreus NIH2624]
Length = 261
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 140/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F PY+DNGG+T+ + G D+AI+A DTR AGYNI TR K+F T I
Sbjct: 28 EHSFYPYTDNGGSTLGITGADFAILAGDTRSVAGYNINTRYDPKVFKIGGDDETGEGAQI 87
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS T+ A+ +S ++Y KRFFPYY I
Sbjct: 88 L-LSVVGFAADGHALKERLDAVVKMYKYQHGKPMSVTACAQRLSTILYQKRFFPYYVHAI 146
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD +GKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 147 LAGLDEDGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQV---------------N 191
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ + + E +AL K P+P +V+DAFT+A ER I G
Sbjct: 192 FKNQYIPGSGEGHALEPK-------------KPEPLPRATVERLVRDAFTSAVERHIEVG 238
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + IT+DGI+E PL+KD
Sbjct: 239 DGLQMMVITRDGIEEIYTPLKKD 261
>gi|290562593|gb|ADD38692.1| Proteasome subunit beta type-1 [Lepeophtheirus salmonis]
Length = 238
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 137/260 (52%), Gaps = 51/260 (19%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---------H 61
P Q F PY DNGGTT+ +AG D+ +IASDTRL Y+I +R+ K+FD
Sbjct: 21 NPHQVSFQPYQDNGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGAS 80
Query: 62 YYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+ F+ + I + Y + H K MST++LA+M+SI +Y KRFFPYY ++AG
Sbjct: 81 GCWCDVLTFIRVAESRI---KNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAG 137
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
LD EG+G +++YDP+GH E+ GG+S ++Q +LDN +I+
Sbjct: 138 LDDEGRGAIFTYDPVGHCEKVKISCGGASMEMIQPILDN---VIEK-------------- 180
Query: 182 HDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGV 241
+N N + + +++ +++V D F +AAER I TGDGV
Sbjct: 181 ----------------------KNMTNAELVDLSIDETVNIVHDCFISAAERQIQTGDGV 218
Query: 242 HLCAITKDGIKEYNFPLRKD 261
ITKDGI+ LR+D
Sbjct: 219 VFKIITKDGIETKRVGLRRD 238
>gi|154278896|ref|XP_001540261.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
gi|150412204|gb|EDN07591.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
Length = 266
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 147/276 (53%), Gaps = 43/276 (15%)
Query: 2 ALVTKQILETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD 60
+ Q P QHH F+PY+DNGG+T+ +AG DYAI+A DTR +GYNI TR KLF
Sbjct: 18 SFTEPQTTAGPKQHHGFNPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFK 77
Query: 61 HYYYRPTYNFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMM 105
+ ++++ F +MY ++H K MS + A+ ++ ++
Sbjct: 78 IGEGDECGEGAHL-VLSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATIL 136
Query: 106 YGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGII 165
Y KRFFPYY I+AG+D +GKG +YSYDP+G ER RA G++ +L+ LDNQV
Sbjct: 137 YSKRFFPYYVHAILAGMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQV--- 193
Query: 166 QHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKD 225
+ L + E NA+ +++ P P + A+ +V D
Sbjct: 194 ------------NFKNQYLPGSGEGNAM-----------DKQPRPSEPPPRDVALQLVND 230
Query: 226 AFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
AFT+A ER I GDG+ + IT++GI+E PL+KD
Sbjct: 231 AFTSAVERHIEVGDGLQVMVITREGIQEIYHPLKKD 266
>gi|168019760|ref|XP_001762412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686490|gb|EDQ72879.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 142/272 (52%), Gaps = 48/272 (17%)
Query: 1 MALVTKQILETPIQH---HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK 57
M + P H +SPY +NGGT VA+AG DY +IA+DTR+S G++I TR+ SK
Sbjct: 3 MVFAPRLAESAPTSHVGASWSPYDNNGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSK 62
Query: 58 LFDHYYYRPTYNFLMIFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKR 109
+ H+ F + Q +Y H+H+K MS ++A+++S +Y KR
Sbjct: 63 I--HHITEKCVLASSGFQADVRSLQKNLDARHQIYQHQHSKQMSCPAMAQLLSNTLYYKR 120
Query: 110 FFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSS 169
FFPYY+ ++ GLD EGKGCVY+YD +G ER+ + + GS L+ +LDNQ
Sbjct: 121 FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERSGYSSQGSGQTLIMPVLDNQ-------- 172
Query: 170 KQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTA 229
L S ++L R TP+ +A+ ++KD F +
Sbjct: 173 -----------------------LKSASPLVLPPRES----STPLTESEAVDLIKDTFAS 205
Query: 230 AAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
AAERDIYTGDGV + I K+GI+ L++D
Sbjct: 206 AAERDIYTGDGVEIVIINKEGIRRETMALKRD 237
>gi|116780814|gb|ABK21828.1| unknown [Picea sitchensis]
gi|116783100|gb|ABK22793.1| unknown [Picea sitchensis]
gi|224284319|gb|ACN39895.1| unknown [Picea sitchensis]
gi|224285431|gb|ACN40438.1| unknown [Picea sitchensis]
Length = 229
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 142/261 (54%), Gaps = 53/261 (20%)
Query: 14 QHH--FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
QHH +SPY +NGGT +A+AG +Y +IA+DTR+S GY+I TR+ SK+ + +
Sbjct: 9 QHHSTWSPYDNNGGTCIAIAGSNYCVIAADTRMSTGYSILTRDYSKICNL-----ADKCV 63
Query: 72 MI---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
M F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY+ ++
Sbjct: 64 MASSGFQADVKALQKNLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLG 123
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD EGKGCV++YD +G ER + A G+ G L+ +LDNQ
Sbjct: 124 GLDNEGKGCVFTYDAVGSYERVGYGAQGTGGTLMMPVLDNQ------------------- 164
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
L S +LL ++ TP+ +A+ +VKD F +AAERDIYTGDG
Sbjct: 165 ------------LKSPSPLLLPAQDA----TTPLSESEAVDLVKDVFASAAERDIYTGDG 208
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ + + +G+K LR+D
Sbjct: 209 LEIVVVNAEGVKREFLELRRD 229
>gi|320586233|gb|EFW98912.1| proteasome component [Grosmannia clavigera kw1407]
Length = 265
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 143/277 (51%), Gaps = 58/277 (20%)
Query: 7 QILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF------- 59
Q E QH F PY+DNGGTT+A+AG D+AI+A DTR +AGY+I +R K+F
Sbjct: 25 QAPEGARQHRFDPYTDNGGTTLAIAGADFAIVAGDTRHTAGYSINSRFSPKVFKIGGSTA 84
Query: 60 DHYYYRPTYNFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIM 104
D + R ++++ F +MY + H K +S + AK +S +
Sbjct: 85 DQHDAR--------IVLSVVGFAADGEALKERLDTICKMYRYRHGKPISVNACAKRLSTI 136
Query: 105 MYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGI 164
+Y KRFFPYYT I+ GLD +G G +YSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 137 LYQKRFFPYYTHAILGGLDEDGIGAIYSYDPVGSYEREQSRAGGAAASLITPFLDNQVNF 196
Query: 165 IQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVK 224
+ + V G HDL + R + P+P +VK
Sbjct: 197 ------KNQYVPGSGIGHDL-MERP---------------------RVPLPRNDVEELVK 228
Query: 225 DAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
DAF A ER I GD + + +TKDGI+E PL+KD
Sbjct: 229 DAFDGAVERHIEVGDYLQMLVVTKDGIEEVVLPLKKD 265
>gi|336464627|gb|EGO52867.1| proteasome component C5 [Neurospora tetrasperma FGSC 2508]
Length = 265
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 140/267 (52%), Gaps = 44/267 (16%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYN 69
E QH F PY+DNGG+T+A+AG D+ I+A DTRL++GY+I +R KLF
Sbjct: 28 EGARQHRFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLFKIGGTTADQK 87
Query: 70 FLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYY 114
I ++++ F +MY + H K MS + A+ +S ++Y KRFFPYY
Sbjct: 88 DATI-VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYY 146
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
I+ GLD EGKG +YSYDP+G ER RAGG++ +L+ LDNQV Q +
Sbjct: 147 VYAILGGLDEEGKGAIYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----KNQYEP 202
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
G +G QE ++ P+ + +VKDAF A ER
Sbjct: 203 GSG-----------------------VGHALQER-ERKPLTRSEGEVLVKDAFDGAVERH 238
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
I GDG+ + ITKDGI+E PL+KD
Sbjct: 239 IEVGDGLQMMVITKDGIEEVLLPLKKD 265
>gi|71725697|gb|AAZ38994.1| proteasome-like protein [Oxyuranus scutellatus]
Length = 174
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 115/193 (59%), Gaps = 39/193 (20%)
Query: 69 NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
+ L + TI +MY H +NK+MS+ ++A M+S ++Y +RFFPYY II GLD EGKG
Sbjct: 21 DCLTLTTILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 80
Query: 129 CVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
VYS+DP+G +R +F+AGGS+ A+LQ LLDNQVG+
Sbjct: 81 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGL------------------------ 116
Query: 189 EINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
+N + + P+ LEKA+ +VKD F +AAERD+YTGD + C ITK
Sbjct: 117 ---------------KNMQGARQLPLSLEKALQLVKDVFISAAERDVYTGDALETCIITK 161
Query: 249 DGIKEYNFPLRKD 261
DGIKE +FPLR+D
Sbjct: 162 DGIKEESFPLRRD 174
>gi|396457904|ref|XP_003833565.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
JN3]
gi|312210113|emb|CBX90200.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
JN3]
Length = 264
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 142/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ +AG D+AI+A DTR ++GYNI TR KLF + N
Sbjct: 31 QHGFYPYTDNGGSTLGIAGQDFAILAGDTRSTSGYNINTRYAPKLF-KIGGEGSDNKDAR 89
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS ++ A+ +S ++Y KRFFPYY I
Sbjct: 90 IVLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHAI 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD EGKG +YSYDP+G ER RA G++ +L+ LDNQV K M G
Sbjct: 150 LAGLDEEGKGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNF-----KNMYEPGSG 204
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ H+L + P+P + +V+DAFT+A ER I G
Sbjct: 205 V-GHELKAKQ----------------------AEPLPQDHVEDLVRDAFTSAVERHIEVG 241
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + IT +GI+E PL++D
Sbjct: 242 DGLQMMTITSEGIRESYTPLKRD 264
>gi|367043468|ref|XP_003652114.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
gi|346999376|gb|AEO65778.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
Length = 265
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 140/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F PY+DNGG+T+A+AG D+ I+A DTRL++GY+I +R KLF
Sbjct: 32 EHRFDPYADNGGSTLAIAGADFTIMAGDTRLTSGYSINSRFHPKLF-KIGGSTADQKDAT 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY + H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 91 LVLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVHAI 150
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD +GKG VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 151 LGGLDEDGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQV---------------N 195
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ + + E +AL + ++ P+ + +VKDAF A ER I G
Sbjct: 196 FKNQYVPNSGEGHALQER-------------ERRPLTRAEVEMLVKDAFDGAVERHIEVG 242
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + AITKDGI+E PL+KD
Sbjct: 243 DGLQMMAITKDGIEEIVLPLKKD 265
>gi|224130004|ref|XP_002320726.1| predicted protein [Populus trichocarpa]
gi|222861499|gb|EEE99041.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 136/262 (51%), Gaps = 51/262 (19%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
T Q F PY NGGT VA+AG DY ++A+DTR+S GYNI TR+ SK+ +
Sbjct: 2 TKQQARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKIC-----KLADKC 56
Query: 71 LMI---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
LM F + Q +Y H+HNK MS ++A+++S +Y KRFFPYYT ++
Sbjct: 57 LMASSGFQADVKALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVL 116
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
G D EGKGCVY+YD +G E+ + A GS L+ +LDNQ
Sbjct: 117 VGFDEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPVLDNQ------------------ 158
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
L S +LL Q+ V TP+ +AI VVKD F +A ERDIYTGD
Sbjct: 159 -------------LKSPSPLLL--PAQDAV--TPLTEAEAIDVVKDVFASATERDIYTGD 201
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
+ + + DGI+ LRKD
Sbjct: 202 KLEIVIVNADGIRREYAELRKD 223
>gi|303313738|ref|XP_003066878.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106545|gb|EER24733.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320032575|gb|EFW14527.1| proteasome component C5 [Coccidioides posadasii str. Silveira]
Length = 259
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 137/263 (52%), Gaps = 45/263 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ + GPD+AI+A DTR +GYNI TR K+F +I
Sbjct: 27 QHGFYPYTDNGGSTLGITGPDFAILAGDTRSVSGYNINTRFAPKIFKIGADETGEGGHII 86
Query: 74 FTITILP-------------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
++ +MY + H K MS + A+ +S ++Y KRFFPYY I+
Sbjct: 87 LSVVGFSADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILG 146
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD +GKG +YSYDP+G ER RA G++ +L+ LDNQV + K + GG
Sbjct: 147 GLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEH--GG-- 202
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIYTG 238
E V +TP PL + A+ +V+DAFT+A ER I G
Sbjct: 203 --------------------------ELVQRTPEPLSRATALELVRDAFTSAVERHIEVG 236
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ IT DGI+E PL++D
Sbjct: 237 DGLQTMIITADGIEEVITPLKQD 259
>gi|171680321|ref|XP_001905106.1| hypothetical protein [Podospora anserina S mat+]
gi|170939787|emb|CAP65013.1| unnamed protein product [Podospora anserina S mat+]
Length = 264
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 143/267 (53%), Gaps = 44/267 (16%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYN 69
E QH F PY+DNGG+T+A+AG D+ I+A DTRL++GY+I +R K+F +
Sbjct: 27 EGARQHRFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRFHPKVF-KIGGTTSDQ 85
Query: 70 FLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYY 114
++++ F +MY + H K MS + A+ +S ++Y KRFFPYY
Sbjct: 86 SDATLVLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYY 145
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
I+ GLD EGKG VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 146 AYAILGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQV------------ 193
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
+ + + E +AL + ++ P+ ++ ++VKDAF A ER
Sbjct: 194 ---NFKNQFIPGSGEGHALQER-------------ERRPLTRQEVETLVKDAFDGAVERH 237
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
I GDG+ + ITK+GI+E PL++D
Sbjct: 238 IEVGDGLQMMIITKEGIEEVILPLKRD 264
>gi|322698009|gb|EFY89783.1| proteasome component C5 [Metarhizium acridum CQMa 102]
Length = 263
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 143/265 (53%), Gaps = 44/265 (16%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P +H F+PY+DNGG+T+ +AG D+ I+A DTR ++GY+I +R K+F + +
Sbjct: 28 PREHRFNPYTDNGGSTLGIAGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGSTASQDDA 87
Query: 72 MIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
I +++ F ++Y + H K M+ + AK +S ++Y KRFFPYY +
Sbjct: 88 TI-VLSVCGFAADGTALRDQLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYVT 146
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
++ GLD EGKG VYSYDP+G ER RAGG++G+L+ LDNQV + + V
Sbjct: 147 AMLGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNF------KNQYVP 200
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
G HDL + ++ P+ + +++KDAF A ER I
Sbjct: 201 GSGEGHDL----------------------QERERHPLSRAQVETIIKDAFDGAVERHIE 238
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GD + + ITKDGI+E P++KD
Sbjct: 239 VGDALQMLIITKDGIEETILPMKKD 263
>gi|363755242|ref|XP_003647836.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891872|gb|AET41019.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
Length = 242
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 139/264 (52%), Gaps = 38/264 (14%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HY 62
+ +I PI+H F+PY DNGGT + +AG D+A+IA DTR + GY+I +R + K+FD
Sbjct: 10 SNEIEHVPIEHRFNPYDDNGGTILGIAGEDFAVIAGDTRHTTGYSINSRNEPKVFDCGDN 69
Query: 63 YYRPTYNFLMIFTITILPF----QMYLHEH-NKVMSTTSLAKMISIMMYGKRFFPYYTST 117
F + F + Y +H NK M+ S A+ I ++YGKR FPYY T
Sbjct: 70 ILISANGFAADGDALVKKFKNNLKWYHFDHNNKKMTLKSAARNIQHLLYGKRMFPYYVHT 129
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
IIAGLD +GKG VYS+DP+G ER RAGG++ +++ LDNQV K
Sbjct: 130 IIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASIIMPFLDNQVNFKNQYEPDSKGT-- 187
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
+ I LS L++ I +V+DAFT+A ER I+
Sbjct: 188 --------KPKSIRFLS---------------------LDEVIELVRDAFTSATERHIHV 218
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GD + + ITK+G+KE L+KD
Sbjct: 219 GDSLQIMIITKEGVKEEYHSLKKD 242
>gi|358395926|gb|EHK45313.1| hypothetical protein TRIATDRAFT_131680 [Trichoderma atroviride IMI
206040]
Length = 263
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 143/265 (53%), Gaps = 44/265 (16%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P +H F+PY+DNGG+T+A++G D+ I+A DTR ++GY+I +R K+F + +
Sbjct: 28 PREHAFNPYTDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMSPKVFKIGGTTASQDDA 87
Query: 72 MIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
I +++ F ++Y + H K MS + AK +S ++Y KRFFPYYT
Sbjct: 88 TI-VLSVCGFAADGEALRDRLDTICKIYRYRHGKPMSLNACAKRLSTILYQKRFFPYYTH 146
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
++ GLD EG G VYSYDP+G ER RAGG++G+L+ LDNQV + + +
Sbjct: 147 AMLGGLDEEGTGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNF------KNQYIP 200
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
G HDL + ++ P+ + ++VKDAF A ER I
Sbjct: 201 GSGEGHDL----------------------KERERRPLSRPQVETIVKDAFDGAVERHIE 238
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GD + + ITKDGI+E PL+KD
Sbjct: 239 VGDTLQMLIITKDGIEEAFLPLKKD 263
>gi|296805321|ref|XP_002843485.1| proteasome component C5 [Arthroderma otae CBS 113480]
gi|238844787|gb|EEQ34449.1| proteasome component C5 [Arthroderma otae CBS 113480]
Length = 261
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 142/264 (53%), Gaps = 46/264 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF----DHYYYRPTYN 69
QH F PY+DNGG+T+ +AG ++AI+A DTR +GYNI TR K+F D + +
Sbjct: 28 QHSFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHM 87
Query: 70 FLMIFTITI----------LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
L + + +MY + HNK MS + A+ +S ++Y KRFFPYY I+
Sbjct: 88 ILCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAIL 147
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
AG+D EGKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 148 AGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQV---------------NF 192
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPL--EKAISVVKDAFTAAAERDIYT 237
+ +A + + NA +V + P PL E A +V DAFT++ ER I
Sbjct: 193 KNQYVAGSGQGNA---------------SVPRKPEPLSREGAQQLVHDAFTSSVERHIEV 237
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +TKDGI+E PL++D
Sbjct: 238 GDGLQMMIVTKDGIEEVYRPLKRD 261
>gi|119567808|gb|EAW47423.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_d [Homo sapiens]
Length = 205
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 130/250 (52%), Gaps = 69/250 (27%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P+Q FSPY NGGT V G +G++ + L
Sbjct: 25 PLQLRFSPYVFNGGTDKTVIG------------CSGFH------------------GDCL 54
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+ I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD EGKG VY
Sbjct: 55 TLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVY 114
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
S+DP+G +R +F+AGGS+ A+LQ LLDNQV
Sbjct: 115 SFDPVGSYQRDSFKAGGSASAMLQPLLDNQV----------------------------- 145
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI
Sbjct: 146 ----------GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 195
Query: 252 KEYNFPLRKD 261
+E LRKD
Sbjct: 196 REETVSLRKD 205
>gi|118488258|gb|ABK95948.1| unknown [Populus trichocarpa]
Length = 223
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 134/262 (51%), Gaps = 51/262 (19%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
T Q F PY NGGT VA+AG DY ++A+DTR+S GYNI TR+ SK+ +
Sbjct: 2 TKQQARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKIC-----KLADKC 56
Query: 71 LMI---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
LM F + Q +Y H+HNK MS ++A+++S +Y KRFFPYYT ++
Sbjct: 57 LMASSGFQADVKALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVL 116
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
G D EGKGCVY+YD +G E+ + A GS L+ +LDNQ ++ S + L +
Sbjct: 117 VGFDEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPVLDNQ---LKSPSPLLLPALDAV 173
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
TP+ +AI VVKD F +A ERDIYTGD
Sbjct: 174 --------------------------------TPLTEAEAIDVVKDVFASATERDIYTGD 201
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
+ + + DGI+ LRKD
Sbjct: 202 KLEIVIVNADGIRREYAELRKD 223
>gi|258564630|ref|XP_002583060.1| proteasome component C5 [Uncinocarpus reesii 1704]
gi|237908567|gb|EEP82968.1| proteasome component C5 [Uncinocarpus reesii 1704]
Length = 259
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 135/263 (51%), Gaps = 45/263 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ + GP++AI+A DTR +GYNI TR K+F +I
Sbjct: 27 QHGFYPYTDNGGSTLGITGPNFAILAGDTRSVSGYNINTRFAPKVFKIGADDAGEGGHII 86
Query: 74 FTITILP-------------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
++ +MY + H K MS + A+ +S ++Y KRFFPYY I+
Sbjct: 87 LSVVGFSADGQALKERLDAIVKMYEYHHGKPMSVKACAQRLSTILYSKRFFPYYVHAILG 146
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD +GKG +YSYDP+G ER RA G++ +L+ LDNQV + K +
Sbjct: 147 GLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAE------- 199
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIYTG 238
R E V + P PL + A+ +V+DAFT+A ER I G
Sbjct: 200 -----------------------RGDELVPRVPEPLSRDTALELVRDAFTSAVERHIEVG 236
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ IT DGI+E PL+KD
Sbjct: 237 DGLQTMIITSDGIQEIITPLKKD 259
>gi|189193569|ref|XP_001933123.1| proteasome subunit beta type-1 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187978687|gb|EDU45313.1| proteasome subunit beta type-1 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 264
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 140/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ ++G D+ I+A DTR ++GYNI TR KLF P I
Sbjct: 31 QHGFYPYTDNGGSTLGISGADFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGARI 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS ++ A+ +S ++Y KRFFPYY I
Sbjct: 91 -VLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHAI 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EGKG +YSYDP+G ER RA G++ +L+ LDNQV K M G
Sbjct: 150 LGGLDEEGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNF-----KNMYEPGSG 204
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
H+L ++ P+P + +V+DAFT+A ER I G
Sbjct: 205 T-GHEL----------------------KSKQAQPLPRDHVEDLVRDAFTSAVERHIEVG 241
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + ITKDGI E PL++D
Sbjct: 242 DGLQMMIITKDGIAETFTPLKRD 264
>gi|195398909|ref|XP_002058063.1| GJ15696 [Drosophila virilis]
gi|194150487|gb|EDW66171.1| GJ15696 [Drosophila virilis]
Length = 256
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 48/248 (19%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHY---------YYRPTYNFLMI 73
NGGT +A+AG ++ +IASDTR+ +G +I TR+QSK+F + T + +
Sbjct: 48 NGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMTSL 107
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
I I QMY EHNK +ST +LA+MISI+MY +RFFPY+T TI+AG+D GKG VY Y
Sbjct: 108 LQIRI---QMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYY 164
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
DP+GH ER +R GSSG +L LD+ +G H+
Sbjct: 165 DPVGHMERCRYRVLGSSGKMLLPALDHGLGWEHHT------------------------- 199
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
L+ +DK E+A+++ ++ A++RD++TGD L ITKDGI+
Sbjct: 200 ------LVPPDQYPPLDK-----ERALALARNCLRVASDRDLFTGDTGVLKLITKDGIET 248
Query: 254 YNFPLRKD 261
PLRKD
Sbjct: 249 ETLPLRKD 256
>gi|46108556|ref|XP_381336.1| hypothetical protein FG01160.1 [Gibberella zeae PH-1]
Length = 264
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 143/263 (54%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F+PY+DNGG+T+A+AG D+ I+A DTR ++GY+I +R K+F + +
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADFTIMAGDTRHTSGYSINSRMSPKVFRIGGTTASQEDATL 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y + H K MS + AK +S ++YGKRFFPYY+ +
Sbjct: 91 -VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMSVNACAKRLSTVLYGKRFFPYYSHAM 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EG+G VYSYDP+G ER RAGG++G+L+ LDNQV + + + G
Sbjct: 150 LGGLDEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNF------KNQYIPGS 203
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
H+L + ++ P+ + +VVKDAF A ER I G
Sbjct: 204 GEGHEL----------------------KERERRPLTRTEVETVVKDAFDGAVERHIEVG 241
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D + + IT DGI+E PL+KD
Sbjct: 242 DNLQMLIITADGIEETFLPLKKD 264
>gi|195398923|ref|XP_002058070.1| GJ15881 [Drosophila virilis]
gi|194150494|gb|EDW66178.1| GJ15881 [Drosophila virilis]
Length = 262
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 48/248 (19%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHY---------YYRPTYNFLMI 73
NGGT +A+AG ++ +IASDTR+ +G +I TR+QSK+F + T + +
Sbjct: 54 NGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMTSL 113
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
I I QMY EHNK +ST +LA+MISI+MY +RFFPY+T TI+AG+D GKG VY Y
Sbjct: 114 LQIRI---QMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYY 170
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
DP+GH ER +R GSSG +L LD+ +G H+
Sbjct: 171 DPVGHMERCRYRVLGSSGKMLLPALDHGLGWEHHT------------------------- 205
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
L+ +DK E+A+++ ++ A++RD++TGD L ITKDGI+
Sbjct: 206 ------LVPPDQYPPLDK-----ERALALARNCLRVASDRDLFTGDTGVLKLITKDGIET 254
Query: 254 YNFPLRKD 261
PLRKD
Sbjct: 255 ETLPLRKD 262
>gi|408398080|gb|EKJ77215.1| hypothetical protein FPSE_02589 [Fusarium pseudograminearum CS3096]
Length = 264
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 143/263 (54%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F+PY+DNGG+T+A+AG D+ I+A DTR ++GY+I +R K+F + +
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADFTIMAGDTRHTSGYSINSRMSPKVFRIGGTTASQEDATL 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y + H K MS + AK +S ++YGKRFFPYY+ +
Sbjct: 91 -VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMSVNACAKRLSTVLYGKRFFPYYSHAM 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EG+G VYSYDP+G ER RAGG++G+L+ LDNQV + + + G
Sbjct: 150 LGGLDEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNF------KNQYIPGS 203
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
H+L + ++ P+ + +VVKDAF A ER I G
Sbjct: 204 GEGHEL----------------------KERERRPLTRTEVETVVKDAFDGAVERHIEVG 241
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D + + IT DGI+E PL+KD
Sbjct: 242 DNLQMLIITADGIEETFLPLKKD 264
>gi|254586379|ref|XP_002498757.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
gi|238941651|emb|CAR29824.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
Length = 244
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 143/267 (53%), Gaps = 44/267 (16%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---- 60
T+ PIQ+ F PY+DNGGT + +AG D+A++A DTR + Y+I +R +SK+FD
Sbjct: 12 TQSAAAPPIQYQFYPYTDNGGTVLGIAGEDFAVLAGDTRHTTDYSINSRYESKVFDCGDN 71
Query: 61 -----HYYYRPTYNFLMIFTITILPFQMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYY 114
+ Y + F ++ + Y +HN K +S S A+ I ++YGKRFFPYY
Sbjct: 72 IVITANGYAADGEALVKRFKNSV---KWYHFDHNDKKLSLNSAARNIQHLLYGKRFFPYY 128
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
TIIAGLD EGKG VYS+DP+G ER RAGG++ +L+ LDNQV
Sbjct: 129 VQTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNF---------- 178
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
H+ + + L L +++ I +V+DAFT+A ER
Sbjct: 179 -------HNQYVPESNGRVKRPLKFL--------------SVDEVIRLVRDAFTSATERH 217
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
I GDG+ + +TKDG+ + + L++D
Sbjct: 218 IQVGDGLEILIVTKDGVTKQFYELKRD 244
>gi|392866253|gb|EAS28865.2| proteasome component C5 [Coccidioides immitis RS]
Length = 260
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 136/263 (51%), Gaps = 45/263 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ + GPD+AI+A DTR +GYNI TR K+F +I
Sbjct: 28 QHGFYPYTDNGGSTLGITGPDFAILAGDTRSVSGYNINTRFAPKIFKIGADETGEGGHII 87
Query: 74 FTITILP-------------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
++ +MY + H K MS + A+ +S ++Y KRFFPYY I+
Sbjct: 88 LSVVGFSADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILG 147
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD +GKG +YSYDP+G ER RA G++ +L+ LDNQV + K + GG
Sbjct: 148 GLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEH--GG-- 203
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIYTG 238
E V TP PL + A+ +V+DAFT+A ER I G
Sbjct: 204 --------------------------ELVQVTPEPLSRATALELVRDAFTSAVERHIEVG 237
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ IT DGI+E PL++D
Sbjct: 238 DGLQTMIITADGIEEVITPLKQD 260
>gi|452837570|gb|EME39512.1| hypothetical protein DOTSEDRAFT_180093 [Dothistroma septosporum
NZE10]
Length = 263
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 147/268 (54%), Gaps = 50/268 (18%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P QH F PY+DNGG+T+ ++G D+ ++A DTR ++GYNI TR + KLF P N
Sbjct: 28 PRQHAFYPYTDNGGSTLGISGTDFTVLAGDTRSTSGYNINTRYEPKLFKIGGDGPE-NVG 86
Query: 72 MIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
++++ F +MY ++H K +S + A+ +S ++Y KRFFPYY +
Sbjct: 87 SKIVLSVVGFAADGKALKERLDTVVKMYKYQHGKDISVHACAQRLSHILYSKRFFPYYVT 146
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGII-QHSSKQMKSV 175
I+ G+D EGKG +YSYDP+G ER RA G++ +L+ LDNQV + Q+ Q +
Sbjct: 147 AILGGIDEEGKGALYSYDPVGSYEREATRAAGAASSLIMPFLDNQVNLKNQYDPTQAQ-- 204
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAI--SVVKDAFTAAAER 233
GF ++ V P PL++ ++VKDAFT+A ER
Sbjct: 205 --------------------------GFGKEQLV---PKPLDRTTTEALVKDAFTSAVER 235
Query: 234 DIYTGDGVHLCAITKDGIKEYNFPLRKD 261
I GDG+ + ITK+GI+E PL++D
Sbjct: 236 HIEVGDGLQMMIITKEGIEERYAPLKRD 263
>gi|119185113|ref|XP_001243373.1| hypothetical protein CIMG_07269 [Coccidioides immitis RS]
Length = 259
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 136/263 (51%), Gaps = 45/263 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ + GPD+AI+A DTR +GYNI TR K+F +I
Sbjct: 27 QHGFYPYTDNGGSTLGITGPDFAILAGDTRSVSGYNINTRFAPKIFKIGADETGEGGHII 86
Query: 74 FTITILP-------------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
++ +MY + H K MS + A+ +S ++Y KRFFPYY I+
Sbjct: 87 LSVVGFSADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILG 146
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
GLD +GKG +YSYDP+G ER RA G++ +L+ LDNQV + K + GG
Sbjct: 147 GLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEH--GG-- 202
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIYTG 238
E V TP PL + A+ +V+DAFT+A ER I G
Sbjct: 203 --------------------------ELVQVTPEPLSRATALELVRDAFTSAVERHIEVG 236
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ IT DGI+E PL++D
Sbjct: 237 DGLQTMIITADGIEEVITPLKQD 259
>gi|440636579|gb|ELR06498.1| 20S proteasome subunit beta 6 [Geomyces destructans 20631-21]
Length = 266
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 146/263 (55%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+A+AG ++AI+A DTR ++GYNI TR + K+F T +
Sbjct: 33 QHRFDPYTDNGGSTLAIAGDNFAILAGDTRSTSGYNINTRYEPKVFKIGGSGSTQRDATL 92
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y ++H K M+ + A+ +SI++Y KRFFPYY I
Sbjct: 93 I-LSVVGFAADANALKERLDTVVKLYRYQHGKAMTVKAAAQRLSIILYQKRFFPYYAHAI 151
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EGKG VYSYDP+G ER RAGG++ +L+ LD+QV + + S +G
Sbjct: 152 LGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDSQVNF--KNQYEPGSGVG- 208
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ L + +LLG E+ +VKDAF +A ER I G
Sbjct: 209 ------------HNLKERERVLLGRDVVED-------------LVKDAFDSAVERHIEVG 243
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + ITKDGI+E PL++D
Sbjct: 244 DGLLMMVITKDGIEEIYKPLKQD 266
>gi|322708662|gb|EFZ00239.1| proteasome component C5 [Metarhizium anisopliae ARSEF 23]
Length = 263
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 143/265 (53%), Gaps = 44/265 (16%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P +H F+PY+DNGG+T+ +AG D+ I+A DTR ++GY+I +R K+F + +
Sbjct: 28 PREHRFNPYTDNGGSTLGIAGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGSTSSQDDA 87
Query: 72 MIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
I +++ F ++Y + H K M+ + AK +S ++Y KRFFPYY +
Sbjct: 88 TI-VLSVCGFAADGTALRDQLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYVT 146
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
++ GLD EGKG VYSYDP+G ER RAGG++G+L+ LDNQV + + V
Sbjct: 147 AMLGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNF------KNQYVP 200
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
G H+L + ++ P+ + +++KDAF A ER I
Sbjct: 201 GSGEGHNL----------------------QERERHPLSRAQVETIIKDAFDGAVERHIE 238
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GD + + ITKDGI+E P++KD
Sbjct: 239 VGDALQMLIITKDGIEETILPMKKD 263
>gi|358388877|gb|EHK26470.1| hypothetical protein TRIVIDRAFT_36186 [Trichoderma virens Gv29-8]
Length = 264
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 143/265 (53%), Gaps = 44/265 (16%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P +H F+PYSDNGG+T+A++G D+ I+A DTR ++GY+I +R K+F T
Sbjct: 29 PREHRFNPYSDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGTTATQEDA 88
Query: 72 MIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
I +++ F ++Y + H K M+ + AK +S ++Y KRFFPYYT
Sbjct: 89 TI-VLSVCGFAADGEALRDRLDTVCKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYTH 147
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
++ GLD EGKG VYSYDP+G ER RAGG++G+L+ LDNQV
Sbjct: 148 AMLGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQV-------------- 193
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
+ + + E +AL + ++ P+ + ++VKDAF A ER I
Sbjct: 194 -NFKNQYIPGSGEGHALKER-------------ERHPLTRPQVETLVKDAFDGAVERHIE 239
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GD + + ITK+GI+E PL+KD
Sbjct: 240 VGDSLQMLIITKEGIEEVFLPLKKD 264
>gi|367001675|ref|XP_003685572.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
gi|357523871|emb|CCE63138.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
Length = 241
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 148/272 (54%), Gaps = 58/272 (21%)
Query: 7 QILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD------ 60
++ TPI+H F+PYSDNGGT + +AG D+A++A DTR + Y+I +R + K+FD
Sbjct: 11 EVSNTPIEHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDDII 70
Query: 61 ---HYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
+ + + F +I + + ++K ++ +S A+ I ++YGKRFFPYY T
Sbjct: 71 ISANGFAADGEALVKRFKNSIKWY--HFDNNDKKLALSSAARNIQHLLYGKRFFPYYVHT 128
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
IIAGLD EGKG VYS+DP+G ER RAGG++ +L+ LDNQV
Sbjct: 129 IIAGLDEEGKGAVYSFDPVGSYEREFCRAGGAAASLIMPFLDNQV--------------- 173
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVD-----KTP---VPLEKAISVVKDAFTA 229
F+NQ D K P + +++ I +V+DAFT+
Sbjct: 174 ------------------------NFKNQYTPDSNGKVKRPFKHLSIDEVIKLVRDAFTS 209
Query: 230 AAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
A ER I+ GDG+ + +TK+G+++ + L++D
Sbjct: 210 ATERHIHVGDGLEILIVTKEGVRKEFYELKRD 241
>gi|451998685|gb|EMD91149.1| hypothetical protein COCHEDRAFT_90180 [Cochliobolus heterostrophus
C5]
Length = 264
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 142/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ ++G D+AI+A DTR ++GYNI TR KLF + N
Sbjct: 31 QHGFYPYTDNGGSTLGISGADFAILAGDTRSTSGYNINTRYAPKLF-KIGGEGSDNKGAR 89
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K M+ ++ A+ +S ++Y KRFFPYY I
Sbjct: 90 IVLSVVGFAADAHALKERLDTIVKMYKYQHGKPMTVSACAQRLSHILYNKRFFPYYVHAI 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD +GKG +YSYDP+G ER RA G++ +L+ LDNQV K M G
Sbjct: 150 LGGLDEDGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNF-----KNMYEPGSG 204
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ H+L ++ P+P + +V+DAFT+A ER I G
Sbjct: 205 V-GHEL----------------------KSKQAEPLPRDHVEDLVRDAFTSAVERHIEVG 241
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + ITKDGI E PL++D
Sbjct: 242 DGLQMMIITKDGIAETYTPLKRD 264
>gi|169769575|ref|XP_001819257.1| proteasome component C5 [Aspergillus oryzae RIB40]
gi|238488110|ref|XP_002375293.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
gi|83767116|dbj|BAE57255.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700172|gb|EED56511.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
Length = 261
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 140/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F PY+DNGG+T+ + G D+AI+A DTR AGYNI +R K+F T I
Sbjct: 28 EHSFYPYTDNGGSTLGITGADFAILAGDTRSVAGYNINSRYAPKVFKIGGDDDTGEGAHI 87
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 88 I-LSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAI 146
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD EGKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 147 LAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQV---------------N 191
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ + + + +AL K P+P E +V+DAFT+A ER I G
Sbjct: 192 FKNQYIPSSGDGHALEPK-------------KPEPLPRETVEQLVRDAFTSAVERHIEVG 238
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + IT++GI+E PL+KD
Sbjct: 239 DGLQMMVITQNGIEEIYTPLKKD 261
>gi|340992803|gb|EGS23358.1| putative proteasome protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 265
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 141/269 (52%), Gaps = 44/269 (16%)
Query: 8 ILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
+ E +H F PY+DNGG+T+A+AG D+ I+A DTRL++GY+I +R KL+
Sbjct: 26 VPEGAREHRFDPYADNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLYKIGGTTAD 85
Query: 68 YNFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFP 112
+ I ++++ F +MY + H K MS + A+ +S ++Y KRFFP
Sbjct: 86 QSDATI-VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFP 144
Query: 113 YYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQM 172
YY I+ GLD EGKG VYSYDP+G ER RA G++ +L+ LDNQV +
Sbjct: 145 YYAYAILGGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNF------KN 198
Query: 173 KSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAE 232
+ V G H+L + + P+ + +VKDAF A E
Sbjct: 199 QYVPGSGEGHNL----------------------QERPRRPLTRSEVEVLVKDAFDGAVE 236
Query: 233 RDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
R I GDG+ + ITKDGI+E PL++D
Sbjct: 237 RHIEVGDGLQMMVITKDGIEEILLPLKRD 265
>gi|310793289|gb|EFQ28750.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 263
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 143/265 (53%), Gaps = 48/265 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F+PY+DNGG+T+A+AG D+AI+A DTR ++GY+I +R K+F T I
Sbjct: 30 QHRFNPYTDNGGSTLAIAGADFAIMAGDTRSTSGYSINSRYTPKVFKIGGTTSTQEDATI 89
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y + H K MS T+ AK +S ++Y KRFFPYY I
Sbjct: 90 L-LSVVGFAADGEALKDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRFFPYYVYAI 148
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EG G V+SYDP+G ER RAGG++ +L+ LDNQV + + V G
Sbjct: 149 LGGLDEEGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNF------KNQYVPGS 202
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIY 236
H+L ++ VPLE+ A +VKDAF A ER I
Sbjct: 203 GVGHELQ------------------------ERPRVPLERKEAEILVKDAFDGAVERHIE 238
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GD + + ITK+GI+E PL+KD
Sbjct: 239 VGDHLQMMVITKNGIEEVLLPLKKD 263
>gi|116206868|ref|XP_001229243.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183324|gb|EAQ90792.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 265
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 139/266 (52%), Gaps = 42/266 (15%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD-HYYYRPTY 68
E +H F PY+DNGG+T+A+AG ++I+A DTRL++GY+I +R KLF
Sbjct: 28 EGAREHRFDPYTDNGGSTLAIAGAKFSILAGDTRLTSGYSINSRHHPKLFKIGGTTADQK 87
Query: 69 NFLMIFTITILP-------------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYT 115
+ M+ ++ +MY + H K MS + A+ +S ++Y KRFFPYY+
Sbjct: 88 DATMVLSVVGFAADGEALKERLDTICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYS 147
Query: 116 STIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSV 175
I+ GLD EG G VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 148 HAILGGLDEEGNGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQV------------- 194
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDI 235
+ + + E +AL + ++ P+ + +VKDAF A ER I
Sbjct: 195 --NFKNQYIPNSGEGHALQER-------------ERRPLTRSEVEVLVKDAFDGAVERHI 239
Query: 236 YTGDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + IT DGI+E PL+KD
Sbjct: 240 EVGDGLQMMIITNDGIEEILLPLKKD 265
>gi|344249385|gb|EGW05489.1| Proteasome subunit beta type-1 [Cricetulus griseus]
Length = 140
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 109/179 (60%), Gaps = 39/179 (21%)
Query: 83 MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERA 142
MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD EGKG VYS+DP+G +R
Sbjct: 1 MYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRD 60
Query: 143 NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLG 202
+F+AGGS+ A+LQ LLDNQV G
Sbjct: 61 SFKAGGSASAMLQPLLDNQV---------------------------------------G 81
Query: 203 FRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
F+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI+E PLRKD
Sbjct: 82 FKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 140
>gi|330914581|ref|XP_003296697.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
gi|311331038|gb|EFQ95204.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
Length = 264
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 140/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ ++G D+ I+A DTR ++GYNI TR KLF P I
Sbjct: 31 QHGFYPYTDNGGSTLGISGADFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGARI 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS ++ A+ +S ++Y KRFFPYY I
Sbjct: 91 -VLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHAI 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EGKG +YSYDP+G ER RA G++ +L+ LDNQV K M G
Sbjct: 150 LGGLDEEGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNF-----KNMYEPGSG 204
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
H+L ++ P+P + +V+DAFT+A ER I G
Sbjct: 205 T-GHEL----------------------KSKQAQPLPRDHVEDLVRDAFTSAVERHIEVG 241
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + ITK+GI E PL++D
Sbjct: 242 DGLQMMIITKEGIAETFTPLKRD 264
>gi|378725413|gb|EHY51872.1| 20S proteasome subunit beta 6 [Exophiala dermatitidis NIH/UT8656]
Length = 264
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 143/260 (55%), Gaps = 40/260 (15%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F+PY+DNGG+T+ + G D+AI+A DTR ++GY+I TR KLF + + +++
Sbjct: 33 QHAFNPYTDNGGSTLGITGADFAILAGDTRSTSGYSINTRYAPKLFRIGDDGDSSSRIVL 92
Query: 74 FTITILP------------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+ +MY ++H K MS + A+ +S ++Y KRFFPYY I+ G
Sbjct: 93 SVVGFAADGNALKERLDAIVKMYKYQHGKPMSVKACAQRLSTILYQKRFFPYYVHAILGG 152
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
LD +GKG +YSYDP+G ER RA G++ +L+ LDNQV + + + + G
Sbjct: 153 LDEDGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQV------NYKNQYIAGSGFG 206
Query: 182 HDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGV 241
H+L R+ +L P + I +VKDAFT+A ER I GDG+
Sbjct: 207 HELQ-QRQPESL---------------------PKDVVIGLVKDAFTSATERHIEVGDGL 244
Query: 242 HLCAITKDGIKEYNFPLRKD 261
+ ITKDGI+E PL++D
Sbjct: 245 QMLIITKDGIEETYTPLKRD 264
>gi|326428761|gb|EGD74331.1| proteasome subunit beta type-1 [Salpingoeca sp. ATCC 50818]
Length = 180
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 29/180 (16%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTER 141
Q Y ++H K MST + A+M++ M+YGKRFFPYYT I+AGLD +GKGCV+SYDP+G ER
Sbjct: 30 QNYEYQHRKPMSTPACAQMLATMLYGKRFFPYYTYNILAGLDADGKGCVFSYDPVGSYER 89
Query: 142 ANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILL 201
++RA G++ ALLQ LDNQ + +++ +
Sbjct: 90 EHYRAAGTASALLQPFLDNQARAL-----------------------------ARIPDYI 120
Query: 202 GFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
G +NQ+ V P+ E+A++++KD FT+AAERDIYTGD V + +TKDG++E+ FPLR D
Sbjct: 121 GRKNQQGVVFEPISKERAMTIIKDVFTSAAERDIYTGDAVDIRIVTKDGLEEHRFPLRCD 180
>gi|302774737|ref|XP_002970785.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
gi|302818938|ref|XP_002991141.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300141072|gb|EFJ07787.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300161496|gb|EFJ28111.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
Length = 226
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 134/256 (52%), Gaps = 51/256 (19%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI--- 73
+SPY +NGGT VA+AG DY I+A+DTRLS GY+I TR SKLF + + +M
Sbjct: 11 WSPYENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLF-----KLSDTAVMASSG 65
Query: 74 FTITILPFQM--------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
F + Q Y H+H K MS ++A+++S +Y KRFFPYY+ ++ GLD E
Sbjct: 66 FQADVRTLQKNLEARQKGYYHQHGKPMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDTE 125
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKGCVY+YD +G ER + GS L+ +LDNQ
Sbjct: 126 GKGCVYTYDAVGSYERTGYSTQGSGAELIMPILDNQ------------------------ 161
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
L S +L R TP+ ++A+ +VKD F +A ER IYTGDG+ +
Sbjct: 162 -------LKSASPLLYPPRET----ATPLTEQEALEIVKDTFASATERQIYTGDGLEIVV 210
Query: 246 ITKDGIKEYNFPLRKD 261
I KDGI + L+KD
Sbjct: 211 INKDGIHKEYLDLKKD 226
>gi|149047100|gb|EDL99820.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
[Rattus norvegicus]
gi|149047101|gb|EDL99821.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
[Rattus norvegicus]
Length = 140
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 109/179 (60%), Gaps = 39/179 (21%)
Query: 83 MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERA 142
MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD EGKG VYS+DP+G +R
Sbjct: 1 MYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRD 60
Query: 143 NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLG 202
+F+AGGS+ A+LQ LLDNQV G
Sbjct: 61 SFKAGGSASAMLQPLLDNQV---------------------------------------G 81
Query: 203 FRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
F+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI+E PLRKD
Sbjct: 82 FKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 140
>gi|121709884|ref|XP_001272558.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
gi|119400708|gb|EAW11132.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
Length = 261
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 141/271 (52%), Gaps = 45/271 (16%)
Query: 7 QILETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYR 65
Q P++ H F PY+DNGG+T+ + G D+AI+A DTR AGYNI +R K+F
Sbjct: 20 QASSVPVKEHSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDA 79
Query: 66 PTYNFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRF 110
T I ++++ F +MY ++H K MS + A+ +S ++Y KRF
Sbjct: 80 ETGEGARIL-LSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRF 138
Query: 111 FPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSK 170
FPYY I+AGLD EGKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 139 FPYYVHAILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQV-------- 190
Query: 171 QMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAA 230
+ + + E +AL K P+P +V+DAFT+A
Sbjct: 191 -------NFKNQYIPGSGEGHALEPK-------------KAEPLPRGTVEQLVRDAFTSA 230
Query: 231 AERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
ER I GDG+ + IT+ GI+E PL+KD
Sbjct: 231 VERHIEVGDGLQMMVITESGIEEIFIPLKKD 261
>gi|255541320|ref|XP_002511724.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223548904|gb|EEF50393.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 223
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 134/259 (51%), Gaps = 45/259 (17%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
T Q ++SPY +NGG+ VA+AG DY +IA+DTR+S GYNI TR+ SK+ +
Sbjct: 2 TKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICQ--LAEKSVMA 59
Query: 71 LMIFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
F + Q +Y H+HNK MS ++ +++S +Y KRFFPYY ++ GL
Sbjct: 60 SSGFQADVQALQKHLKAKHLIYQHQHNKQMSCPAMGQLLSNTLYFKRFFPYYAFNVLGGL 119
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D EGKGCVY+YD +G ER + A GS L+ LDNQ
Sbjct: 120 DSEGKGCVYTYDAVGSYERVGYSAQGSGSTLIMPFLDNQ--------------------- 158
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
L S +LL Q+ V TP+ +A+ +VK F +A ERDIYTGD V
Sbjct: 159 ----------LKSPSPLLL--PAQDAV--TPLSEPEAVDLVKTVFASATERDIYTGDKVE 204
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ + DGI+ LRKD
Sbjct: 205 IVVLNADGIRREYMELRKD 223
>gi|302501484|ref|XP_003012734.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
gi|302660909|ref|XP_003022128.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
gi|291176294|gb|EFE32094.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
gi|291186059|gb|EFE41510.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
Length = 261
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 141/264 (53%), Gaps = 46/264 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF----DHYYYRPTYN 69
QH F PY+DNGG+T+ +AG ++AI+A DTR +GYNI TR K+F D + +
Sbjct: 28 QHSFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHI 87
Query: 70 FLMIFTITI----------LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
L + + +MY + HNK MS + A+ +S ++Y KRFFPYY I+
Sbjct: 88 ILCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAIL 147
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
AG+D EGKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 148 AGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQV---------------NF 192
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPL--EKAISVVKDAFTAAAERDIYT 237
+ + + + NA +V + P PL E A +V DAFT++ ER I
Sbjct: 193 KNQYVPGSGQGNA---------------SVARKPEPLSREGAQQLVHDAFTSSVERHIEV 237
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +TKDGI+E PL++D
Sbjct: 238 GDGLQMMIVTKDGIEEVYRPLKRD 261
>gi|365990732|ref|XP_003672195.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
gi|343770970|emb|CCD26952.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
Length = 241
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 148/267 (55%), Gaps = 44/267 (16%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---- 60
+ ++ TPI+H F+PY+DNGGT + +AG D+AI+A DTR + Y+I +R + K+FD
Sbjct: 9 SSEVNSTPIEHAFNPYTDNGGTILGIAGEDFAILAGDTRHTTDYSINSRYEPKVFDCGDN 68
Query: 61 -----HYYYRPTYNFLMIFTITILPFQMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYY 114
+ + + F ++ + Y +HN K +S S A+ I ++YGKRFFPYY
Sbjct: 69 IVISANGFAADGEALVKRFKNSL---KWYHFDHNDKKLSMKSAARNIQHLLYGKRFFPYY 125
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
TIIAGLD GKG VYS+DP+G ER RAGG++ +L+ LDNQV Q +
Sbjct: 126 VHTIIAGLDENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----KNQFEP 181
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
G + + + LS +++ I +V+D+FT+A ER
Sbjct: 182 GTDG------KVKKPLKYLS---------------------IDEVIKLVRDSFTSATERH 214
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
I+ GDG+ + +TKDG+++ + L++D
Sbjct: 215 IHVGDGLEILIVTKDGVRKEFYELKRD 241
>gi|302810458|ref|XP_002986920.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
gi|300145325|gb|EFJ12002.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
Length = 226
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 133/256 (51%), Gaps = 51/256 (19%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI--- 73
+SPY +NGGT VA+AG DY I+A+DTRLS GY+I TR SKLF + + +M
Sbjct: 11 WSPYENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLF-----KLSDTAVMASSG 65
Query: 74 FTITILPFQM--------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
F + Q Y H+H K MS +A+++S +Y KRFFPYY+ ++ GLD E
Sbjct: 66 FQADVRTLQKNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTE 125
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKGCVY+YD +G ER + GS L+ +LDNQ
Sbjct: 126 GKGCVYTYDAVGSYERTGYSTQGSGAELIMPILDNQ------------------------ 161
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
L S +L R TP+ ++A+ +VKD F +A ER IYTGDG+ +
Sbjct: 162 -------LKSASPLLYPPRET----ATPLTEQEALEIVKDTFASATERQIYTGDGLEIVV 210
Query: 246 ITKDGIKEYNFPLRKD 261
I KDGI + L+KD
Sbjct: 211 INKDGIHKEYLDLKKD 226
>gi|327304499|ref|XP_003236941.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
gi|326459939|gb|EGD85392.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
Length = 261
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 141/264 (53%), Gaps = 46/264 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF----DHYYYRPTYN 69
QH F PY+DNGG+T+ +AG ++AI+A DTR +GYNI TR K+F D + +
Sbjct: 28 QHSFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHI 87
Query: 70 FLMIFTITI----------LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
L + + +MY + HNK MS + A+ +S ++Y KRFFPYY I+
Sbjct: 88 ILCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAIL 147
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
AG+D EGKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 148 AGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQV---------------NF 192
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPL--EKAISVVKDAFTAAAERDIYT 237
+ + + + NA +V + P PL E A +V DAFT++ ER I
Sbjct: 193 KNQYVPGSGQGNA---------------SVARKPEPLSREGAQQLVHDAFTSSVERHIEV 237
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +TKDGI+E PL++D
Sbjct: 238 GDGLQIMIVTKDGIEEVYRPLKRD 261
>gi|398395515|ref|XP_003851216.1| proteasome core particle subunit beta 6 [Zymoseptoria tritici
IPO323]
gi|339471095|gb|EGP86192.1| hypothetical protein MYCGRDRAFT_105119 [Zymoseptoria tritici
IPO323]
Length = 264
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 137/267 (51%), Gaps = 48/267 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P QH F PY+DNGG+T+ ++G D+ I+A DTR ++GYNI TR KLF P
Sbjct: 29 PKQHGFYPYTDNGGSTLGISGSDFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPDQTGA 88
Query: 72 MIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
I ++++ F +MY ++H K M + A+ +S ++YGKRFFP+Y +
Sbjct: 89 RI-VLSVVGFAADGHALKERLDTVVKMYKYQHGKDMPVHACAQRLSHILYGKRFFPFYVT 147
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
I+ G+D EGKG +YSYDP+G ER RA G++ +L+ LDNQV + + L
Sbjct: 148 AILGGIDDEGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNLKNQTDPAQPQGL 207
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPL--EKAISVVKDAFTAAAERD 234
E V P PL E +V+DAFT+A ER
Sbjct: 208 ------------------------------EKVGLVPKPLSREHVEELVRDAFTSAVERH 237
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
I GDG+ L ITK+G+ E L+KD
Sbjct: 238 IEVGDGLQLMVITKEGVVETYSELKKD 264
>gi|391863506|gb|EIT72814.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
[Aspergillus oryzae 3.042]
Length = 261
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 140/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F PY+DNGG+T+ + G D+AI+A DTR AGYNI +R K+F T I
Sbjct: 28 EHSFYPYTDNGGSTLGITGADFAILAGDTRSVAGYNINSRYAPKVFKIGGDDDTGEGAHI 87
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 88 I-LSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAI 146
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD EG+G +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 147 LAGLDEEGEGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQV---------------N 191
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ + + + +AL K P+P E +V+DAFT+A ER I G
Sbjct: 192 FKNQYIPSSGDGHALEPK-------------KPEPLPRETVEQLVRDAFTSAVERHIEVG 238
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + IT++GI+E PL+KD
Sbjct: 239 DGLQMMVITQNGIEEIYTPLKKD 261
>gi|453081972|gb|EMF10020.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 255
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 143/266 (53%), Gaps = 46/266 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P QH F PY+DNGG+T+ ++G D+ I+A DTR ++GYNI TR + KLF P N
Sbjct: 20 PKQHGFYPYTDNGGSTLGISGSDFTILAGDTRSTSGYNINTRYEPKLFKIGGNGPE-NEG 78
Query: 72 MIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
++++ F +MY ++H K +S + A+ +S ++YGKRFFPYY +
Sbjct: 79 SKIVLSVVGFAADGHALKERLDTVVKMYKYQHGKDISIGACAQRLSHILYGKRFFPYYVT 138
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGII-QHSSKQMKSV 175
I+ G+D +GKG +YSYDP+G ER RA G++ +L+ LDNQV + Q+ Q +
Sbjct: 139 AILGGIDEDGKGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNLKNQYDPTQPQ-- 196
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDI 235
GF + V K P+ + S+VKDAFT+A ER I
Sbjct: 197 --------------------------GFSKEPLVAK-PLDRQHVESLVKDAFTSAVERHI 229
Query: 236 YTGDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ ITKDGI E L+KD
Sbjct: 230 EVGDGLQTMIITKDGILETYADLKKD 255
>gi|357159246|ref|XP_003578386.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Brachypodium distachyon]
Length = 221
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 130/250 (52%), Gaps = 45/250 (18%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL 79
Y +NGGT VA+AG DY ++A+DTRLS GY+I TR+ SK+ + R F I
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICE--LXRKCVIASSGFQGDIK 66
Query: 80 PFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
Q +Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD EGKGCVY
Sbjct: 67 ALQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVY 126
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
SYD +G ER + A G+ L+ +LDNQ
Sbjct: 127 SYDAVGSYERTGYSAQGTGSTLIMPVLDNQ------------------------------ 156
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
L S +LL R+ TP+ +A+ +VKD F +A ERDIYTGD V + I K G
Sbjct: 157 -LKSPSPLLLPARDA----VTPLSESEAVDLVKDVFASATERDIYTGDKVEIVVINKAGT 211
Query: 252 KEYNFPLRKD 261
+ LRKD
Sbjct: 212 RREYIELRKD 221
>gi|222431909|gb|ACM50881.1| 20S proteasome beta subunit F1 [Ulva fasciata]
Length = 241
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 139/264 (52%), Gaps = 60/264 (22%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QH +SPY +NGGT VAVAG DY IIA TRLS G+++ +RE S L +
Sbjct: 22 QHASWSPYDNNGGTVVAVAGSDYCIIAGSTRLSTGFSVLSREHSSL---------HQLSR 72
Query: 73 IFTITILPFQ---------------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
+ + F+ MY H H + + ++A+ +S +YGKRFFP+YT
Sbjct: 73 MCVLASSGFEGDRATLTKRLKSRAVMYQHSHKRPIGCEAMAQALSNELYGKRFFPFYTFN 132
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
I+AGLD +G G VYSYD +G ER + A G+ L+Q LLDNQ+ + S L
Sbjct: 133 ILAGLDADGTGAVYSYDAVGSYERTGYAAQGTGNDLVQPLLDNQL--------RAASPL- 183
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
L K ++ T +P+E+A+ +V+DA TAA ERDIYT
Sbjct: 184 --------------VLPKKPSV------------TALPVERALDIVRDALTAAGERDIYT 217
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GD + + +TKDGI++ + PL+ D
Sbjct: 218 GDSIEVWIMTKDGIRKESTPLKTD 241
>gi|448105494|ref|XP_004200509.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|448108619|ref|XP_004201140.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359381931|emb|CCE80768.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359382696|emb|CCE80003.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
Length = 241
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 140/263 (53%), Gaps = 48/263 (18%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
PI+H F+PY DNGGT + +AG D+A++A DTR GY+I +R + ++FD N
Sbjct: 15 VPIEHSFNPYQDNGGTVLGIAGEDFAVLAGDTRQVVGYSINSRYEPRVFD-----VGDNI 69
Query: 71 LM-----------IFTITILPFQMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
LM + + Y +H K +S S A+ I ++YGKRFFP+Y ST+
Sbjct: 70 LMTANGFSADGNALINKFKNSLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPFYVSTL 129
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
IAGL+ EGKG VYSYDP+G E RAGG++ +L+ LDNQV Q + G
Sbjct: 130 IAGLNDEGKGVVYSYDPVGSYEVEQCRAGGAAASLIMPFLDNQVNF----KNQYEPGTNG 185
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ +E+ LS L++ + +V+DAFT+ ER IY G
Sbjct: 186 EK------KKELRYLS---------------------LDEVVQLVRDAFTSVTERHIYVG 218
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + + KDG+K +PL++D
Sbjct: 219 DGLEIYIVNKDGVKVEYYPLKRD 241
>gi|358373509|dbj|GAA90107.1| proteasome component Prs3 [Aspergillus kawachii IFO 4308]
Length = 260
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 140/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F PY+DNGG+T+ + G D+AI+A DTR AGYNI +R K+F + I
Sbjct: 27 EHSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDDESGEGANI 86
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 87 -VLSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAI 145
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD +GKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 146 LAGLDEDGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQV---------------N 190
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ + + E +AL K P+P + +V+DAFT+A ER I G
Sbjct: 191 FKNQYIPGSGEGHALEPK-------------KAEPLPRDTVEQLVRDAFTSAVERHIEVG 237
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + IT+ GI+E +PL+KD
Sbjct: 238 DGLQMMVITRSGIEEIYYPLKKD 260
>gi|159124092|gb|EDP49210.1| proteasome component Prs3, putative [Aspergillus fumigatus A1163]
Length = 261
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 138/263 (52%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F PY+DNGG+T+ + G D+AI+A DTR AGYNI +R K+F T I
Sbjct: 28 EHSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGAHI 87
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 88 L-LSVVGFAADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAI 146
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD EGKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 147 LAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQV---------------N 191
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ + + E +AL K P+P +V+DAFT+A ER I G
Sbjct: 192 FKNQYIPGSGEGHALEPK-------------KAEPLPRATVEQLVRDAFTSAVERHIEVG 238
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + IT+ GI+E PL+KD
Sbjct: 239 DGLQMMVITQRGIEEIYTPLKKD 261
>gi|242786404|ref|XP_002480798.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
10500]
gi|218720945|gb|EED20364.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
10500]
Length = 253
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 142/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F+PY+DNGG+T+ +AG D+ I+A DTR ++GYNI +R K+F T I
Sbjct: 20 EHSFNPYTDNGGSTLGIAGSDFCILAGDTRSTSGYNINSRYAPKVFKIGGDDETGEGAHI 79
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y ++H K +S + A+ +S ++Y KRFFPYY I
Sbjct: 80 -VLSVVGFAADGQALKERLDSIVKVYRYQHGKPISVKACAQRLSTILYSKRFFPYYAHAI 138
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EG+G +YSYDP+G ER RA G++ +L+ LDNQV + + + G
Sbjct: 139 LGGLDEEGRGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNF------KNQYIPGS 192
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
H AL R A P+P + +V+DAFT+A ER I G
Sbjct: 193 GEGH--ALERRTPA--------------------PLPRDTVEQLVRDAFTSAVERHIEVG 230
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + ITKDGI+E PL+KD
Sbjct: 231 DGLQMMIITKDGIQESYTPLKKD 253
>gi|212543349|ref|XP_002151829.1| proteasome component Prs3, putative [Talaromyces marneffei ATCC
18224]
gi|210066736|gb|EEA20829.1| proteasome component Prs3, putative [Talaromyces marneffei ATCC
18224]
Length = 252
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 141/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F+PY+DNGG+T+ +AG D+ I+A DTR ++GYNI TR KLF T I
Sbjct: 19 EHSFNPYTDNGGSTLGIAGSDFCILAGDTRSTSGYNINTRYAPKLFKIGGDDETGEGAHI 78
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y ++H K ++ + A+ +S ++Y KRFFPYY I
Sbjct: 79 -VLSVVGFAADGHALKERLDSIVKVYRYQHGKPITVNACAQRLSTILYSKRFFPYYAYAI 137
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EG+G +YSYDP+G ER RA G++ +L+ LDNQV
Sbjct: 138 LGGLDEEGRGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQV---------------N 182
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ + + E +AL E P+P + +V+DAFT+A ER I G
Sbjct: 183 FKNQYIPESGEGHAL-------------ERRTPAPLPQDTVEQLVRDAFTSAVERHIEVG 229
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + ITKDGI+E PL+KD
Sbjct: 230 DGLQMMIITKDGIQETYTPLKKD 252
>gi|70991375|ref|XP_750536.1| proteasome component Prs3 [Aspergillus fumigatus Af293]
gi|66848169|gb|EAL88498.1| proteasome component Prs3, putative [Aspergillus fumigatus Af293]
Length = 261
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 138/263 (52%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F PY+DNGG+T+ + G D+AI+A DTR AGYNI +R K+F T I
Sbjct: 28 EHSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGAHI 87
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 88 L-LSVVGFAADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAI 146
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD EGKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 147 LAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQV---------------N 191
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ + + E +AL K P+P +V+DAFT+A ER I G
Sbjct: 192 FKNQYIPGSGEGHALEPK-------------KAEPLPRATVEQLVRDAFTSAVERHIEVG 238
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + IT+ GI+E PL+KD
Sbjct: 239 DGLQMMVITQRGIEEIYTPLKKD 261
>gi|401838704|gb|EJT42186.1| PRE7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 241
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 137/258 (53%), Gaps = 38/258 (14%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTY 68
TPI+H F+PY DNGGT + +AG D+A++A DTR Y+I +R + K+FD
Sbjct: 15 TPIEHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNLVMSAN 74
Query: 69 NFLMIFTITILPFQ----MYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
F + F+ Y +HN K +S S A+ I ++YGKRFFPYY TIIAGLD
Sbjct: 75 GFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLD 134
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHD 183
GKG VYS+DP+G ER RAGG++ +L+ LDNQV D
Sbjct: 135 ENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGT----------D 184
Query: 184 LALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHL 243
+ + + LS +E+ I +V+D+FT+A ER I GDG+ +
Sbjct: 185 GKVKKPLKYLS---------------------VEEVIKLVRDSFTSATERHIQVGDGLEI 223
Query: 244 CAITKDGIKEYNFPLRKD 261
+TKDG+K+ + L++D
Sbjct: 224 LIVTKDGVKKEFYELKRD 241
>gi|400601377|gb|EJP69020.1| proteasome A-type and B-type [Beauveria bassiana ARSEF 2860]
Length = 262
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 149/276 (53%), Gaps = 45/276 (16%)
Query: 1 MALVTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD 60
++ V +Q E P +H F+PY+DNGG+T+ +AG D++I+A DTR ++GY+I +R K+F
Sbjct: 17 LSDVPRQAGE-PREHRFNPYTDNGGSTLGIAGADFSIMAGDTRHTSGYSINSRMAPKVFK 75
Query: 61 HYYYRPTYNFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMM 105
+ + I +++ F ++Y + H K M+ + AK +S ++
Sbjct: 76 IGGTNASQDDATI-VLSVCGFAADGDALRDRLDTICKIYRYRHGKPMTLNACAKRLSTIL 134
Query: 106 YGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGII 165
Y KRFFPYYT ++ GLD EGKG +YSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 135 YQKRFFPYYTHALLGGLDEEGKGAIYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF- 193
Query: 166 QHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKD 225
+ + + G HDL + + P+ + +++KD
Sbjct: 194 -----RNQYIPGSGTGHDL----------------------QERPREPLTRPQVETIIKD 226
Query: 226 AFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
AF AAER I GD + + ++K+GI+E PL+KD
Sbjct: 227 AFDGAAERHIEVGDALQMLIVSKNGIEEVFVPLKKD 262
>gi|326472775|gb|EGD96784.1| hypothetical protein TESG_04214 [Trichophyton tonsurans CBS 112818]
gi|326484951|gb|EGE08961.1| proteasome component C5 [Trichophyton equinum CBS 127.97]
Length = 261
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 141/264 (53%), Gaps = 46/264 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF----DHYYYRPTYN 69
QH F PY+DNGG+T+ +AG ++AI+A DTR +GYNI TR K+F D + +
Sbjct: 28 QHSFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHI 87
Query: 70 FLMIFTITI----------LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
L + + +MY + HNK MS + A+ +S ++Y KRFFPYY I+
Sbjct: 88 ILCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAIL 147
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
AG+D EGKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 148 AGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQV---------------NF 192
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPL--EKAISVVKDAFTAAAERDIYT 237
+ + + + NA +V + P PL E A +V DAFT++ ER I
Sbjct: 193 KNQYVPGSGQGNA---------------SVARKPEPLSREGAQQLVHDAFTSSVERHIEV 237
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +T+DGI+E PL++D
Sbjct: 238 GDGLQMMIVTRDGIEEVYRPLKRD 261
>gi|315045602|ref|XP_003172176.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
gi|311342562|gb|EFR01765.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
Length = 261
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 141/264 (53%), Gaps = 46/264 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF----DHYYYRPTYN 69
QH F PY+DNGG+T+ +AG ++AI+A DTR +GYNI +R K+F D + +
Sbjct: 28 QHSFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINSRYAPKVFKIGADEHTGEGGHI 87
Query: 70 FLMIFTITI----------LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
L + + +MY + HNK MS + A+ +S ++Y KRFFPYY I+
Sbjct: 88 ILCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAIL 147
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
AG+D EGKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 148 AGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQV---------------NF 192
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPL--EKAISVVKDAFTAAAERDIYT 237
+ + + + NA +V + P PL E A +V DAFT++ ER I
Sbjct: 193 KNQYVPGSGQGNA---------------SVARKPEPLSREGAQQLVHDAFTSSVERHIEV 237
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +TKDGI+E PL++D
Sbjct: 238 GDGLQMMIVTKDGIEEVYRPLKRD 261
>gi|302814429|ref|XP_002988898.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
gi|300143235|gb|EFJ09927.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
Length = 226
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 133/256 (51%), Gaps = 51/256 (19%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI--- 73
+SPY +NGGT VA+AG DY I+A+DTRLS GY+I TR SKLF + + +M
Sbjct: 11 WSPYENNGGTCVAIAGLDYCIVAADTRLSLGYSILTRGHSKLF-----KLSDTAVMASSG 65
Query: 74 FTITILPFQM--------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
F + Q Y H+H K MS +A+++S +Y KRFFPYY+ ++ GLD E
Sbjct: 66 FQADVRTLQKNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTE 125
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKGCVY+YD +G ER + GS L+ +LDNQ
Sbjct: 126 GKGCVYTYDAVGSYERTGYSTQGSGAELIMPILDNQ------------------------ 161
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
L S +L R TP+ ++A+ +VKD F +A ER IYTGDG+ +
Sbjct: 162 -------LKSASPLLYPPRET----ATPLTEQEALEIVKDTFASATERQIYTGDGLEIVV 210
Query: 246 ITKDGIKEYNFPLRKD 261
I KDGI + L+KD
Sbjct: 211 INKDGIHKEYLDLKKD 226
>gi|119467908|ref|XP_001257760.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
gi|119405912|gb|EAW15863.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
Length = 261
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 138/263 (52%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F PY+DNGG+T+ + G D+AI+A DTR AGYNI +R K+F T I
Sbjct: 28 EHSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGAHI 87
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 88 L-LSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAI 146
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD EGKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 147 LAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQV---------------N 191
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ + + E +AL K P+P +V+DAFT+A ER I G
Sbjct: 192 FKNQYIPGSGEGHALEPK-------------KAEPLPRATVEQLVRDAFTSAVERHIEVG 238
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + IT+ GI+E PL+KD
Sbjct: 239 DGLQMMVITQRGIEEIYTPLKKD 261
>gi|365762155|gb|EHN03761.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 241
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 137/258 (53%), Gaps = 38/258 (14%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTY 68
TPI+H F+PY DNGGT + +AG D+A++A DTR Y+I +R + K+FD
Sbjct: 15 TPIEHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNLVVSAN 74
Query: 69 NFLMIFTITILPFQ----MYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
F + F+ Y +HN K +S S A+ I ++YGKRFFPYY TIIAGLD
Sbjct: 75 GFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLD 134
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHD 183
GKG VYS+DP+G ER RAGG++ +L+ LDNQV D
Sbjct: 135 ENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGT----------D 184
Query: 184 LALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHL 243
+ + + LS +E+ I +V+D+FT+A ER I GDG+ +
Sbjct: 185 GKVKKPLKYLS---------------------VEEVIKLVRDSFTSATERHIQVGDGLEI 223
Query: 244 CAITKDGIKEYNFPLRKD 261
+TKDG+K+ + L++D
Sbjct: 224 LIVTKDGVKKEFYELKRD 241
>gi|145255859|ref|XP_001399123.1| proteasome component C5 [Aspergillus niger CBS 513.88]
gi|134084720|emb|CAK43377.1| unnamed protein product [Aspergillus niger]
gi|350630872|gb|EHA19244.1| hypothetical protein ASPNIDRAFT_54260 [Aspergillus niger ATCC 1015]
Length = 260
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 140/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F PY+DNGG+T+ + G D+AI+A DTR AGYNI +R K+F + I
Sbjct: 27 EHSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDDESGEGANI 86
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 87 -VLSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAI 145
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD +GKG +YSYDP+G ER RA GS+ +L+ LDNQV
Sbjct: 146 LAGLDEDGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQV---------------N 190
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ + + E +AL K P+P + +V+DAFT+A ER I G
Sbjct: 191 FKNQYIPGSGEGHALEPK-------------KAEPLPRDTVEQLVRDAFTSAVERHIEVG 237
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + IT+ G++E +PL+KD
Sbjct: 238 DGLQMMVITRSGVEEIYYPLKKD 260
>gi|169601780|ref|XP_001794312.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
gi|111067849|gb|EAT88969.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
Length = 264
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 142/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ ++G D+AI+A DTR ++GYNI TR KLF P I
Sbjct: 31 QHGFYPYTDNGGSTLGISGADFAILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGARI 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 91 -VLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVAACAQRLSHILYNKRFFPYYVHAI 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD G G +YSYDP+G ER RA G++ +L+ LDNQV K M G
Sbjct: 150 LGGLDENGTGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNF-----KNMYEPGSG 204
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
HDL ++I LS Q++V+ +V+DAFT+A ER I G
Sbjct: 205 T-GHDLK-QKKIEPLS-----------QDHVE----------DLVRDAFTSAVERHIEVG 241
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + ITK+GI E PL+KD
Sbjct: 242 DGLQMMIITKEGIAETFTPLKKD 264
>gi|342879609|gb|EGU80854.1| hypothetical protein FOXB_08721 [Fusarium oxysporum Fo5176]
Length = 264
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 142/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F+PY+DNGG+T+A+AG D+ I+A DTR ++GY+I +R K+F + +
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADFTIMAGDTRHTSGYSINSRMSPKVFRIGGTTASQEDATL 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y + H K M+ + AK +S ++Y KRFFPYY+ +
Sbjct: 91 -VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMTVNACAKRLSTVLYSKRFFPYYSHAM 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EG+G VYSYDP+G ER RAGG++G+L+ LDNQV + + + G
Sbjct: 150 LGGLDEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNF------KNQYIPGS 203
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
H+L + ++ P+ + +VVKDAF A ER I G
Sbjct: 204 GEGHEL----------------------KERERRPLTRTEVETVVKDAFDGAVERHIEVG 241
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D + + IT DGI+E PL+KD
Sbjct: 242 DNLQMLIITADGIEETFLPLKKD 264
>gi|6319430|ref|NP_009512.1| proteasome core particle subunit beta 6 [Saccharomyces cerevisiae
S288c]
gi|130882|sp|P23724.1|PSB6_YEAST RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Multicatalytic endopeptidase complex subunit C5;
AltName: Full=Proteasome component C5; Flags: Precursor
gi|11514003|pdb|1G0U|L Chain L, A Gated Channel Into The Proteasome Core Particle
gi|11514017|pdb|1G0U|Z Chain Z, A Gated Channel Into The Proteasome Core Particle
gi|178847471|pdb|2ZCY|L Chain L, Yeast 20s Proteasome:syringolin A-Complex
gi|178847485|pdb|2ZCY|Z Chain Z, Yeast 20s Proteasome:syringolin A-Complex
gi|178847513|pdb|3BDM|L Chain L, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847527|pdb|3BDM|Z Chain Z, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462947|pdb|3NZJ|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462961|pdb|3NZJ|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462975|pdb|3NZW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462989|pdb|3NZW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463003|pdb|3NZX|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463017|pdb|3NZX|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|333361183|pdb|3MG6|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361197|pdb|3MG6|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361211|pdb|3MG7|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361225|pdb|3MG7|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361239|pdb|3MG8|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361253|pdb|3MG8|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|403071959|pdb|4B4T|6 Chain 6, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|171468|gb|AAA68908.1| proteasome subunit [Saccharomyces cerevisiae]
gi|218467|dbj|BAA00725.1| proteasome subunit [Saccharomyces cerevisiae]
gi|463267|emb|CAA55053.1| YBL0407 [Saccharomyces cerevisiae]
gi|536057|emb|CAA84861.1| PRE7 [Saccharomyces cerevisiae]
gi|45270814|gb|AAS56788.1| YBL041W [Saccharomyces cerevisiae]
gi|151946352|gb|EDN64574.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|207347858|gb|EDZ73901.1| YBL041Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272740|gb|EEU07713.1| Pre7p [Saccharomyces cerevisiae JAY291]
gi|259144804|emb|CAY77743.1| Pre7p [Saccharomyces cerevisiae EC1118]
gi|285810292|tpg|DAA07077.1| TPA: proteasome core particle subunit beta 6 [Saccharomyces
cerevisiae S288c]
gi|323306044|gb|EGA59778.1| Pre7p [Saccharomyces cerevisiae FostersB]
gi|323338788|gb|EGA80003.1| Pre7p [Saccharomyces cerevisiae Vin13]
gi|323349870|gb|EGA84083.1| Pre7p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356250|gb|EGA88054.1| Pre7p [Saccharomyces cerevisiae VL3]
gi|349576338|dbj|GAA21509.1| K7_Pre7p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365767035|gb|EHN08523.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392301173|gb|EIW12262.1| Pre7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 241
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 140/258 (54%), Gaps = 38/258 (14%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTY 68
TPI+H F+PY DNGGT + +AG D+A++A DTR Y+I +R + K+FD
Sbjct: 15 TPIEHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSAN 74
Query: 69 NFLMIFTITILPFQ----MYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
F + F+ Y +HN K +S S A+ I ++YGKRFFPYY TIIAGLD
Sbjct: 75 GFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLD 134
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHD 183
+GKG VYS+DP+G ER RAGG++ +L+ LDNQV Q + G
Sbjct: 135 EDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----KNQYEPGTNG----- 185
Query: 184 LALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHL 243
+ + + LS +E+ I +V+D+FT+A ER I GDG+ +
Sbjct: 186 -KVKKPLKYLS---------------------VEEVIKLVRDSFTSATERHIQVGDGLEI 223
Query: 244 CAITKDGIKEYNFPLRKD 261
+TKDG+++ + L++D
Sbjct: 224 LIVTKDGVRKEFYELKRD 241
>gi|302922344|ref|XP_003053446.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734387|gb|EEU47733.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 264
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 144/263 (54%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F+PY+DNGG+T+A++G D+ I+A DTR ++GY+I +R K+F + + +
Sbjct: 31 EHRFNPYTDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMSPKVFKIGGTTASQDDATL 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y + H K M+ + AK +S ++YGKRFFPYY+ +
Sbjct: 91 -VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMTVNACAKRLSTVLYGKRFFPYYSHAM 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EGKG VYSYDP+G ER RAGG++G+L+ LDNQV
Sbjct: 150 LGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQV---------------N 194
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ + + E + L + ++ P+ + +++KDAF A ER I G
Sbjct: 195 FKNQYIPESGEGHELKER-------------ERRPLTRTEVETLIKDAFDGAVERHIEVG 241
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D + + IT+DGI+E PL+KD
Sbjct: 242 DNLQMVIITRDGIEETFIPLKKD 264
>gi|17380185|sp|O82531.1|PSB1_PETHY RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3608485|gb|AAC35983.1| proteasome beta subunit [Petunia x hybrida]
Length = 223
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 136/262 (51%), Gaps = 51/262 (19%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
T Q ++SPY +NGGT VAVAG DY +IA+DTR+S GYNI TR+ SK+ +
Sbjct: 2 TKQQANWSPYDNNGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKII-----KLADKC 56
Query: 71 LMI---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
+M F + Q +Y H+HNK MS ++ +++S +Y KRFFPYY+ ++
Sbjct: 57 VMASSGFQADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL 116
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
GLD EGKGCV++YD +G ER + + GS L+ LDNQ
Sbjct: 117 GGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ------------------ 158
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
L S +LL Q+ V TP+ +AI +VK F +A ERDIYTGD
Sbjct: 159 -------------LKSPSPLLL--PAQDAV--TPLSEAEAIDLVKTCFASATERDIYTGD 201
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
+ + + GI+ LRKD
Sbjct: 202 RLEIVILNASGIRREEMELRKD 223
>gi|302412397|ref|XP_003004031.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
gi|261356607|gb|EEY19035.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
Length = 264
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 142/265 (53%), Gaps = 48/265 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F+PY+DNGG+T+A+AG D+AI+A DTR ++GY+I +R K++ + I
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADFAIVAGDTRSTSGYSINSRYSPKVYKIGGTTSNQDDATI 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y H H K MS T+ AK +S ++Y KRFFPYY I
Sbjct: 91 L-LSVVGFAADGEALKERLDAICKIYRHRHGKAMSVTACAKRLSTILYQKRFFPYYVYAI 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD +G G V+SYDP+G ER RAGG++ +L+ LDNQV + + V G
Sbjct: 150 LGGLDEKGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNF------KNQYVPGS 203
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIY 236
H+L RE+ VPLE+ A +VKDAF A ER I
Sbjct: 204 GVGHELK-EREV-----------------------VPLERKEAEILVKDAFDGAVERHIE 239
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GD + + IT GI+E PL+KD
Sbjct: 240 VGDALQMMVITSKGIEEILLPLKKD 264
>gi|451848862|gb|EMD62167.1| hypothetical protein COCSADRAFT_38952 [Cochliobolus sativus ND90Pr]
Length = 264
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 141/263 (53%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ ++G D+AI+A DTR ++GYNI TR KLF I
Sbjct: 31 QHGFYPYTDNGGSTLGISGADFAILAGDTRSTSGYNINTRYAPKLFKIGGEGSDSKGARI 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K M+ ++ A+ +S ++Y KRFFPYY I
Sbjct: 91 -VLSVVGFAADAHALKERLDTIVKMYKYQHGKPMTVSACAQRLSHILYNKRFFPYYVHAI 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD +GKG +YSYDP+G ER RA G++ +L+ LDNQV K M G
Sbjct: 150 LGGLDEDGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNF-----KNMYEPGSG 204
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ H+L ++ P+P + +V+DAFT+A ER I G
Sbjct: 205 V-GHEL----------------------KSKQAEPLPRDHVEDLVRDAFTSAVERHIEVG 241
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + ITK+GI E PL++D
Sbjct: 242 DGLQMMIITKEGIAETYTPLKRD 264
>gi|346320799|gb|EGX90399.1| proteasome component C5 [Cordyceps militaris CM01]
Length = 262
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 148/276 (53%), Gaps = 45/276 (16%)
Query: 1 MALVTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD 60
M+ V +Q E P +H F+PY+DNGG+T+A+AG D++IIA DTR ++GY+I +R K+F
Sbjct: 17 MSDVPRQAGE-PREHRFNPYTDNGGSTLAIAGADFSIIAGDTRHTSGYSINSRMAPKVFK 75
Query: 61 HYYYRPTYNFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMM 105
+ + I +++ F ++Y + H K M+ + AK +S ++
Sbjct: 76 IGGTNASQDDATI-VLSVCGFAADGDALRDRLDTICKIYRYRHGKPMTLNACAKRLSTIL 134
Query: 106 YGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGII 165
Y KRFFPYYT ++ GLD EG G VYSYDP+G ER RAGG++ +L+ LDNQV
Sbjct: 135 YQKRFFPYYTHALLGGLDEEGVGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNF- 193
Query: 166 QHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKD 225
+ + V G H+L + P+ + +++KD
Sbjct: 194 -----RNQYVPGSGIGHNL----------------------KERPHAPLSRVQVETIIKD 226
Query: 226 AFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
AF AAER I GD + + +TK+GI+E PL+KD
Sbjct: 227 AFDGAAERHIEVGDSLQMLIVTKNGIEEVFVPLKKD 262
>gi|449432245|ref|XP_004133910.1| PREDICTED: proteasome subunit beta type-1-like [Cucumis sativus]
Length = 223
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 135/262 (51%), Gaps = 51/262 (19%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPT 67
T Q ++SPY +NGG+ VA+AG DY +IA+DTRLS GYNI TR+ SK L D +
Sbjct: 2 TKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVLASS 61
Query: 68 YNFLMIFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY ++
Sbjct: 62 G-----FQADVKALQKALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVL 116
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
GLD EGKGCV++YD +G ER + A GS L+ LDNQ
Sbjct: 117 GGLDSEGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQ------------------ 158
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
L S +LL ++ TP+ +AI +VK F +A ERDIYTGD
Sbjct: 159 -------------LKSPSPLLLPAQDSS----TPLSEAEAIDLVKTVFASATERDIYTGD 201
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
+ + + DG++ LR+D
Sbjct: 202 KLEIVVLNADGLRREYMNLRED 223
>gi|225680770|gb|EEH19054.1| proteasome subunit beta type-1-A [Paracoccidioides brasiliensis
Pb03]
gi|226292463|gb|EEH47883.1| proteasome component C5 [Paracoccidioides brasiliensis Pb18]
Length = 266
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 145/276 (52%), Gaps = 43/276 (15%)
Query: 2 ALVTKQILETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD 60
+ +Q P +HH F+PY+DNGG+T+ +AG DYAI+A DTR GY+I TR KLF
Sbjct: 18 SFAEQQSNGAPKRHHGFNPYTDNGGSTLGIAGEDYAILAGDTRSVTGYSINTRYSPKLFK 77
Query: 61 HYYYRPTYNFLMIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMM 105
+ ++++ F +MY ++H K MS + A+ +S ++
Sbjct: 78 IGEDGEGGEGAHL-VLSVVGFAADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTIL 136
Query: 106 YGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGII 165
Y KRFFPYY I+ G+D +G+G +YSYDP+G ER RA G++ +L+ LDNQV
Sbjct: 137 YSKRFFPYYVHAILGGIDEDGRGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQV--- 193
Query: 166 QHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKD 225
+ ++ E NAL +++ P P E A+ +V D
Sbjct: 194 ------------NFKNQYVSGPGEGNAL-----------DKQPRQPQPQPAEDALQLVND 230
Query: 226 AFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
AFT+A ER I GDG+ + ITKDGI E PL+KD
Sbjct: 231 AFTSAVERHIEVGDGLQIMLITKDGIMEMYHPLKKD 266
>gi|351734454|ref|NP_001238324.1| uncharacterized protein LOC100306148 [Glycine max]
gi|255627685|gb|ACU14187.1| unknown [Glycine max]
Length = 223
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 136/262 (51%), Gaps = 51/262 (19%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
T Q ++SPY +NGG+ VA+AG DY +IA+DTR+S GYNI TR+ SK+ R
Sbjct: 2 TKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKI-----SRLAEKC 56
Query: 71 LMI---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
+M F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY ++
Sbjct: 57 VMASSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVL 116
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
GLD EGKGCV++YD +G ER + + GS L+ LDNQ
Sbjct: 117 GGLDNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ------------------ 158
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
L S +LL Q+ V TP+ +A+ +VK F +A ERDIYTGD
Sbjct: 159 -------------LKSPSPLLL--PAQDAV--TPLSEAEAVDLVKTVFASATERDIYTGD 201
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
V + + GI+ L+KD
Sbjct: 202 KVEIVVLNASGIRREYMDLKKD 223
>gi|429856646|gb|ELA31546.1| proteasome component c5 [Colletotrichum gloeosporioides Nara gc5]
Length = 264
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 48/265 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F+PY+DNGG+T+A+AG DYAI+A DTR ++GY+I +R K+F + I
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADYAIMAGDTRSTSGYSINSRYTPKVFKIGGTTSSQEDATI 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y + H K MS T+ AK +S ++Y KRFFPYY I
Sbjct: 91 L-LSVVGFAADGEALKDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRFFPYYVYAI 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD +G G V+SYDP+G ER RAGG++ +L+ LDNQV + + V G
Sbjct: 150 LGGLDEDGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNF------KNQYVPGS 203
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIY 236
H+L ++ VPLE+ A +VKDAF A ER I
Sbjct: 204 GVGHELQ------------------------ERPRVPLERKEAEILVKDAFDGAVERHIE 239
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GD + + ITK+G++E PL+KD
Sbjct: 240 VGDHLQMMIITKNGVEEVLLPLKKD 264
>gi|115480019|ref|NP_001063603.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|17380182|sp|O64464.1|PSB1_ORYSJ RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3138799|dbj|BAA28276.1| beta 6 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113631836|dbj|BAF25517.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|125606253|gb|EAZ45289.1| hypothetical protein OsJ_29931 [Oryza sativa Japonica Group]
gi|215686333|dbj|BAG87594.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736983|dbj|BAG95912.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 130/248 (52%), Gaps = 41/248 (16%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL 79
Y +NGGT VA+AG DY ++A+DTRLS GYNI TR+ SK+ + + I L
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKAL 68
Query: 80 PFQM------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+ Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD EGKGCV++Y
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
D +G ER + A G+ AL+ +LDNQ L
Sbjct: 129 DAVGSYERTGYSAQGTGSALIMPVLDNQ-------------------------------L 157
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
S +LL R+ TP+ +A+ +VKD F +A ERDIYTGD + + I K G K
Sbjct: 158 KSPSPLLLPARDA----VTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKR 213
Query: 254 YNFPLRKD 261
LRKD
Sbjct: 214 EYIDLRKD 221
>gi|449295464|gb|EMC91486.1| hypothetical protein BAUCODRAFT_117991 [Baudoinia compniacensis
UAMH 10762]
Length = 265
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 146/268 (54%), Gaps = 49/268 (18%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P QH F PY+DNGG+T+ ++G + +IA DTR ++GYNI TR KL+ PT+
Sbjct: 29 PTQHAFYPYTDNGGSTLGISGKTFTVIAGDTRSTSGYNINTRYAPKLYPIGGQGPTHKGS 88
Query: 72 MIFTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
I ++++ F +MY ++H +S + A+ +S ++Y KRFFPYY
Sbjct: 89 KI-VLSVVGFAADGRALQERLDTVVKMYRYQHGCEISVKACAQRLSHILYNKRFFPYYVQ 147
Query: 117 TIIAGLDPE-GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSV 175
I+ G+D E G+G +YSYDP+G ER RA G++ +L+ LDNQV
Sbjct: 148 AILGGIDEETGEGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQV------------- 194
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAER 233
+L E A+S GF ++ V P PLE+ +V+DAFT+A ER
Sbjct: 195 -------NLKNQYEPAAVS-------GFDKKQLV---PQPLERPQVEELVRDAFTSAVER 237
Query: 234 DIYTGDGVHLCAITKDGIKEYNFPLRKD 261
I GDG+ + ITK+GI+E FPL+KD
Sbjct: 238 HIEVGDGLQMMFITKEGIEEVYFPLKKD 265
>gi|401626713|gb|EJS44638.1| pre7p [Saccharomyces arboricola H-6]
Length = 241
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 139/264 (52%), Gaps = 38/264 (14%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HY 62
+ ++ PI+H F+PY DNGGT + +AG D+A++A DTR Y+I +R + K+FD
Sbjct: 9 SSEVSNVPIEHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDN 68
Query: 63 YYRPTYNFLMIFTITILPFQ----MYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTST 117
F + F+ Y +HN K +S S A+ I ++YGKRFFPYY T
Sbjct: 69 IVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHT 128
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
IIAGLD GKG VYS+DP+G ER RAGG++ +L+ LDNQV
Sbjct: 129 IIAGLDENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGT----- 183
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
D + + + LS +E+ I +V+D+FT+A ER I
Sbjct: 184 -----DGKVKKPLKYLS---------------------VEEVIKLVRDSFTSATERHIQV 217
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +TK+G+++ + L++D
Sbjct: 218 GDGLEILIVTKEGVRKEFYELKRD 241
>gi|366984552|gb|AEX09185.1| proteasome subunit beta type 1 [Gossypium hirsutum]
Length = 223
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 137/262 (52%), Gaps = 51/262 (19%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
T Q ++SPY +NGG+ VA+AG DY +IA+DTR+S GYNI TRE SK+ +
Sbjct: 2 TKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKIC-----KLADKC 56
Query: 71 LMI---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
+M F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY+ ++
Sbjct: 57 VMASSGFQADVRALQKQLAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVL 116
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
GLD EGKGCV +YD +G E+ + + GS L+ LDNQ
Sbjct: 117 GGLDNEGKGCVLTYDAVGSYEKVGYSSQGSGSTLIMPFLDNQ------------------ 158
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
L S +LL Q+ V TP+ +AI +VK F +A+ERDIYTGD
Sbjct: 159 -------------LKSPSPLLL--PAQDAV--TPLVEAEAIDLVKTVFASASERDIYTGD 201
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
+ L I GI+ LRKD
Sbjct: 202 KLELVIINAAGIRREYMELRKD 223
>gi|255938694|ref|XP_002560117.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584738|emb|CAP74264.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 259
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 141/265 (53%), Gaps = 48/265 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ + G D+AI+A DTR ++GYNI +R K+F T I
Sbjct: 26 QHSFYPYTDNGGSTLGITGADFAILAGDTRSTSGYNINSRMVPKVFKIGGDDETGEGANI 85
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 86 I-LSVVGFAADGNALKEKLDTMVRMYKYQHGKSMSVGACAQRLSTILYEKRFFPYYVHAI 144
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD EG G +YSYDP+G ER RA G++ +L+ LDNQV + + + + G
Sbjct: 145 LAGLDEEGVGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQV------NSKNQYIPGS 198
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIY 236
H L V K PL+K A +VKDAFT+A ER I
Sbjct: 199 GEGHAL------------------------VPKKAEPLDKETATKLVKDAFTSAVERHIE 234
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ L +T++GI+E L++D
Sbjct: 235 VGDGLQLVIVTREGIEEVFHALKQD 259
>gi|346975013|gb|EGY18465.1| proteasome component C5 [Verticillium dahliae VdLs.17]
Length = 264
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 142/265 (53%), Gaps = 48/265 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F+PY+DNGG+T+A+AG D+AI+A DTR ++GY+I +R K++ + I
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADFAIVAGDTRSTSGYSINSRYSPKVYKIGGTTSNQDDATI 90
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y + H K MS T+ AK +S ++Y KRFFPYY I
Sbjct: 91 L-LSVVGFAADGEALKERLDAICKIYRYRHGKAMSVTACAKRLSTILYQKRFFPYYVYAI 149
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD +G G V+SYDP+G ER RAGG++ +L+ LDNQV + + V G
Sbjct: 150 LGGLDEKGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNF------KNQYVPGS 203
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIY 236
H+L RE+ VPLE+ A +VKDAF A ER I
Sbjct: 204 GVGHELK-EREV-----------------------VPLERKEAEILVKDAFDGAVERHIE 239
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GD + + IT GI+E PL+KD
Sbjct: 240 VGDALQMMVITSKGIEEILLPLKKD 264
>gi|328868192|gb|EGG16572.1| proteasome subunit beta type 1 [Dictyostelium fasciculatum]
Length = 236
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 140/262 (53%), Gaps = 50/262 (19%)
Query: 10 ETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLS-AGYNIYTREQSKLF---DHYYY 64
E PI HH F PY DNGGT +AVAG +Y I+A DTR+S GY I TR +K+F D
Sbjct: 15 EVPISHHRFEPYVDNGGTVLAVAGSNYCIVAGDTRMSDGGYGIQTRHYTKVFKLTDKCVI 74
Query: 65 RPTYNFLMIFTITI-----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
+ + TI + + Y +H K MST ++A+ +S +Y KRFFP+YT ++
Sbjct: 75 ATSG--MQADTIALRKRLDTQLRQYERDHGKSMSTPAIAQFLSNTLYHKRFFPFYTFNLV 132
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
AG+D +G GCV++YD +G ER F + GS L+Q LLDNQVG K + ++ G
Sbjct: 133 AGVDEDGIGCVWTYDAVGSHERVRFSSQGSGNQLIQPLLDNQVG------KFNQQIVDG- 185
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
RE++A E+A+S+VKDA T+A ERDIYTGD
Sbjct: 186 -------PRELSA------------------------EQALSLVKDAITSAGERDIYTGD 214
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
+ I + G+ F L+ D
Sbjct: 215 FADIVTIDQKGVHFEKFDLKLD 236
>gi|67539228|ref|XP_663388.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|40743687|gb|EAA62877.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|259484727|tpe|CBF81196.1| TPA: putative proteasome core component, beta 6 subunit (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 261
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 139/263 (52%), Gaps = 44/263 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+H F PY+DNGG+ + + G D+A++A DTR ++GYNI +R K+F T I
Sbjct: 28 EHSFYPYTDNGGSVLGITGKDFAVLAGDTRSTSGYNINSRYVPKVFKIGGEDETGKGAHI 87
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 88 L-LSVVGFAADGLALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVQAI 146
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD EGKG +Y YDP+G ER R+ G++ +L+ LDNQV
Sbjct: 147 LAGLDEEGKGALYGYDPVGSYEREQCRSAGAASSLIMPFLDNQV---------------N 191
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
++ + + E +AL ++ P+ E +V+DAFT+A ER I G
Sbjct: 192 LKNQYIPGSGEGHALEAR-------------KPEPMSRETVEQLVRDAFTSAVERHIEVG 238
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
DG+ + IT DGI+E PL+KD
Sbjct: 239 DGLQMLVITADGIEEVYHPLKKD 261
>gi|600387|emb|CAA47753.1| proteosome subunit [Arabidopsis thaliana]
Length = 230
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 134/257 (52%), Gaps = 46/257 (17%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QH ++SPY +NGGT VA+AG DY +IA+DTR+S GY+I +R+ SK+ H
Sbjct: 11 QHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKI--HKLADRAVLSSS 68
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD
Sbjct: 69 GFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE 128
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + A GS L+ LDNQ
Sbjct: 129 EGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQ----------------------- 165
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL ++ TP+ +A+ +VK F +A ERDIYTGD + +
Sbjct: 166 --------LKSPSPLLLPKQDSN----TPLSEAEAVDLVKTVFASATERDIYTGDKLEIM 213
Query: 245 AITKDGIKEYNFPLRKD 261
+ DGIK LRKD
Sbjct: 214 ILKADGIKTELMDLRKD 230
>gi|15232965|ref|NP_191641.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|334186160|ref|NP_001190146.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|297820934|ref|XP_002878350.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|12643281|sp|P42742.2|PSB1_ARATH RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome beta subunit F-1; AltName: Full=Proteasome
component 5; AltName: Full=Proteasome subunit beta
type-6; AltName: Full=TAS-F22/FAFP98; AltName:
Full=TAS-G39.20
gi|577531|emb|CAA56201.1| proteasome subunit [Arabidopsis thaliana]
gi|3421120|gb|AAC32073.1| 20S proteasome beta subunit PBF1 [Arabidopsis thaliana]
gi|7329692|emb|CAB82686.1| proteasome component C5 [Arabidopsis thaliana]
gi|17065428|gb|AAL32868.1| proteasome component C5 [Arabidopsis thaliana]
gi|20148485|gb|AAM10133.1| proteasome component C5 [Arabidopsis thaliana]
gi|21554745|gb|AAM63678.1| proteasome component C5 [Arabidopsis thaliana]
gi|297324188|gb|EFH54609.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|332646591|gb|AEE80112.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646593|gb|AEE80114.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 134/257 (52%), Gaps = 46/257 (17%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QH ++SPY +NGGT VA+AG DY +IA+DTR+S GY+I +R+ SK+ H
Sbjct: 4 QHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKI--HKLADRAVLSSS 61
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD
Sbjct: 62 GFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE 121
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + A GS L+ LDNQ
Sbjct: 122 EGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQ----------------------- 158
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL ++ TP+ +A+ +VK F +A ERDIYTGD + +
Sbjct: 159 --------LKSPSPLLLPKQDSN----TPLSEAEAVDLVKTVFASATERDIYTGDKLEIM 206
Query: 245 AITKDGIKEYNFPLRKD 261
+ DGIK LRKD
Sbjct: 207 ILKADGIKTELMDLRKD 223
>gi|388505884|gb|AFK41008.1| unknown [Lotus japonicus]
Length = 223
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 135/257 (52%), Gaps = 46/257 (17%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QH ++SPY +NGG+ VA+AG DY +IA+DTR+S GYNI TRE SK+ +
Sbjct: 4 QHANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKI--SQLAEKSVMASS 61
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY+ ++ GLD
Sbjct: 62 GFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDS 121
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + + GS L+ LDNQ
Sbjct: 122 EGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ----------------------- 158
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL Q+ V TP+ +A+ +VK F +A ERDIYTGD + +
Sbjct: 159 --------LKSPSPLLL--PAQDAV--TPLSETEAVDLVKTVFASATERDIYTGDKLEIV 206
Query: 245 AITKDGIKEYNFPLRKD 261
+ GI+ LRKD
Sbjct: 207 ILNASGIRREYMELRKD 223
>gi|357148563|ref|XP_003574814.1| PREDICTED: proteasome subunit beta type-1-like [Brachypodium
distachyon]
Length = 219
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 128/257 (49%), Gaps = 51/257 (19%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPTYNFLM 72
F PY +NGGT VAVAG DY ++A+DTRLS GY+I +R SK L D +
Sbjct: 3 RFDPYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRAHSKIAHLADKCVLASSG---- 58
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F I Q +Y H HNK MS ++A+++S +Y KRFFPYY ++ GLD
Sbjct: 59 -FQGDIKALQKNLTAKELVYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS 117
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + A G+ L+ +LDNQ
Sbjct: 118 EGKGCVFTYDAVGSYERTGYSAQGTGATLMMPVLDNQ----------------------- 154
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL R+ TP+ +A+ +VKD F +A ERDIYTGD V +
Sbjct: 155 --------LKSPSPLLLPARDA----VTPLSESEAVDLVKDVFASATERDIYTGDSVEIV 202
Query: 245 AITKDGIKEYNFPLRKD 261
I G LRKD
Sbjct: 203 VINSSGTHRECIELRKD 219
>gi|380480528|emb|CCF42385.1| proteasome A-type and B-type [Colletotrichum higginsianum]
Length = 263
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 141/265 (53%), Gaps = 48/265 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F+PY+DNGG+ +A+AG +AI+A DTR ++GY+I +R K+F T I
Sbjct: 30 QHRFNPYTDNGGSXLAIAGAXFAIVAGDTRSTSGYSINSRYTPKVFKIGGTTSTQEDATI 89
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F ++Y + H K MS T+ AK +S ++Y KRFFPYY I
Sbjct: 90 M-LSVVGFAADGEALRDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRFFPYYVYAI 148
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ GLD EG G V+SYDP+G ER RAGG++ +L+ LDNQV + + + G
Sbjct: 149 LGGLDEEGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNF------KNQYIPGS 202
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIY 236
H+L ++ VPLE+ A +VKDAF A ER I
Sbjct: 203 GVGHELQ------------------------ERPRVPLERKEAEILVKDAFDGAVERHIE 238
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GD + + ITK+GI+E PL+KD
Sbjct: 239 VGDHLQMMIITKNGIEEVLLPLKKD 263
>gi|242049776|ref|XP_002462632.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
gi|241926009|gb|EER99153.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
Length = 221
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 129/257 (50%), Gaps = 59/257 (22%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL 79
Y +NGGT VA+AG DY ++A+DTRLS GY+I TR+ SK+ D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICD---------LADKCVLASS 59
Query: 80 PFQ---------------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
FQ +Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD
Sbjct: 60 GFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS 119
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + A G+ L+ +LDNQ
Sbjct: 120 EGKGCVFTYDAVGSYERTGYSAQGTGSTLMMPVLDNQ----------------------- 156
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL R+ TP+ +AI +VKD F +A ERDIYTGD + +
Sbjct: 157 --------LKSPSPLLLPARDA----VTPLSESEAIDLVKDVFASATERDIYTGDKLEIV 204
Query: 245 AITKDGIKEYNFPLRKD 261
I K G K LRKD
Sbjct: 205 VINKAGTKREYIELRKD 221
>gi|61612096|gb|AAX47290.1| proteasome beta 1 subunit [Clonorchis sinensis]
Length = 217
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 138/255 (54%), Gaps = 52/255 (20%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAG--YNIYTREQSKLFDHYYYR--PTYNFLM 72
F PYS NGGT + ++G D+A++ASDTRL A Y IY+R L+ + T F
Sbjct: 5 FYPYSANGGTVMGISGDDFALLASDTRLCAEDRYFIYSRNSPHLYKMGNGKVLATTGFHG 64
Query: 73 -IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
+ T+T L + Y ++H K +ST + A ++S+ +Y +RFFP+Y S+I+ GLD EG+G
Sbjct: 65 DVLTLTKLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVSSILGGLDEEGRG 124
Query: 129 CVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
VY YDP+G ER A GSSG +LQ LD++V
Sbjct: 125 AVYRYDPVGSFERVKCAAAGSSGVILQPFLDHRV-------------------------- 158
Query: 189 EINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIYTGDGVHLCAI 246
E LSS L PLEK AI + KD F +AAERDI GD V + I
Sbjct: 159 EGKNLSSGLP----------------PLEKAEAIKLAKDIFISAAERDINCGDAVLIQVI 202
Query: 247 TKDGIKEYNFPLRKD 261
T+DGI+E++FPLR+D
Sbjct: 203 TRDGIEEFHFPLRRD 217
>gi|414886158|tpg|DAA62172.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 129/248 (52%), Gaps = 41/248 (16%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL 79
Y +NGGT VA+AG DY ++A+DTRLS GY+I TR+ SK+ D + I L
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 80 PFQM------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+ Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD EGKGCV++Y
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
D +G ER + A G+ L+ +LDNQ L
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIMPVLDNQ-------------------------------L 157
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
S +LL R+ TP+ +AI +VKD F +A ERDIYTGD + + I K G K
Sbjct: 158 KSPSPLLLPARDA----VTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKVGTKR 213
Query: 254 YNFPLRKD 261
LRKD
Sbjct: 214 EYIDLRKD 221
>gi|425770053|gb|EKV08528.1| hypothetical protein PDIP_68200 [Penicillium digitatum Pd1]
gi|425771744|gb|EKV10181.1| hypothetical protein PDIG_58720 [Penicillium digitatum PHI26]
Length = 259
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 141/265 (53%), Gaps = 48/265 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
QH F PY+DNGG+T+ + G D+AI+A DTR ++GYNI +R K+F T I
Sbjct: 26 QHSFYPYTDNGGSTLGITGADFAILAGDTRSTSGYNINSRMVPKVFKIGGDDETGEGATI 85
Query: 74 FTITILPF---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
++++ F +MY ++H K MS + A+ +S ++Y KRFFPYY I
Sbjct: 86 I-LSVVGFAADGNALKEKLDTVVKMYKYQHGKSMSVGACAQRLSTILYEKRFFPYYVHAI 144
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AGLD EG G +YSYDP+G ER RA G++ +L+ LDNQV + + + + G
Sbjct: 145 LAGLDEEGVGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQV------NSKNQYIPGS 198
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK--AISVVKDAFTAAAERDIY 236
H L V K PL+K A +V+DAFT+A ER I
Sbjct: 199 GEGHAL------------------------VPKKAEPLDKETAKKLVQDAFTSAVERHIE 234
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +T++GI+E L++D
Sbjct: 235 VGDGLQMLIVTREGIEEVFHALKQD 259
>gi|226531171|ref|NP_001152701.1| proteasome subunit beta type 1 [Zea mays]
gi|194701432|gb|ACF84800.1| unknown [Zea mays]
gi|195605546|gb|ACG24603.1| proteasome subunit beta type 1 [Zea mays]
gi|195659171|gb|ACG49053.1| proteasome subunit beta type 1 [Zea mays]
gi|223974469|gb|ACN31422.1| unknown [Zea mays]
gi|414589908|tpg|DAA40479.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 128/250 (51%), Gaps = 45/250 (18%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL 79
Y +NGGT VA+AG DY ++A+DTRLS GY+I TR+ SK+ D F I
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICD--LADKCVLASSGFQGDIK 66
Query: 80 PFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
Q +Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD EGKGCV+
Sbjct: 67 ALQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVF 126
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
+YD +G ER + A G+ L+ +LDNQ
Sbjct: 127 TYDAVGSYERTGYSAQGTGSTLIMPVLDNQ------------------------------ 156
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
L S +LL R+ TP+ +AI +VKD F +A ERDIYTGD + + I K G
Sbjct: 157 -LKSPSPLLLPVRDA----VTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKAGT 211
Query: 252 KEYNFPLRKD 261
LRKD
Sbjct: 212 MREYIDLRKD 221
>gi|225711612|gb|ACO11652.1| Proteasome subunit beta type-1 precursor [Caligus rogercresseyi]
Length = 238
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 134/258 (51%), Gaps = 45/258 (17%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD------HYY 63
+ P Q F PY DNGGTTV +AG D+ +IASDTRL++ Y+I +R K+F+
Sbjct: 20 KNPHQLSFQPYQDNGGTTVGIAGSDFVVIASDTRLASSYDILSRNVPKIFELGSGCVLGS 79
Query: 64 YRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
+ L + + Y + H K ++T +LA+M+S +Y +RFFPYY ++AGLD
Sbjct: 80 CGCWCDVLTFIRVAESKLKDYHYTHGKELNTPALAQMLSNTLYRRRFFPYYIHNVLAGLD 139
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHD 183
+G+G +Y+YDP+GH E+ GG+S L+Q +LDN V ++ MK D
Sbjct: 140 EKGQGVIYTYDPVGHCEKVKMSCGGTSMELIQPILDNIVEKKNMTNGTMK---------D 190
Query: 184 LALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHL 243
L++ +N ++ D F +AAER I TGDG+
Sbjct: 191 LSIDETVN------------------------------IIHDCFISAAERQIQTGDGIMF 220
Query: 244 CAITKDGIKEYNFPLRKD 261
ITK+GI+ + LR+D
Sbjct: 221 KIITKEGIETKSVGLRRD 238
>gi|356526807|ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-like [Glycine max]
Length = 223
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 135/260 (51%), Gaps = 52/260 (20%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QH ++SPY +NGG+ VA+AG DY +IA+DTR+S GYNI TR+ SK+ + +M
Sbjct: 4 QHANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKI-----SQLAEKCVM 58
Query: 73 I---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY ++ G
Sbjct: 59 ASSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGG 118
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
LD EGKGCV++YD +G ER + + GS L+ LDNQ
Sbjct: 119 LDNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ-------------------- 158
Query: 182 HDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGV 241
L S +LL Q+ V TP+ +A+ +VK F +A ERDIYTGD V
Sbjct: 159 -----------LKSPSPLLL--PAQDAV--TPLSEAEAVDLVKTVFASATERDIYTGDKV 203
Query: 242 HLCAITKDGIKEYNFPLRKD 261
+ + GI LRKD
Sbjct: 204 EIVILNASGIHREYMDLRKD 223
>gi|225453909|ref|XP_002279266.1| PREDICTED: proteasome subunit beta type-1 [Vitis vinifera]
gi|296089152|emb|CBI38855.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 137/262 (52%), Gaps = 51/262 (19%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
T Q ++SPY +NGG+ VA+AG DY +IA+DTR+S GYNI TR+ SK+ +
Sbjct: 2 TKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKIC-----KLADKC 56
Query: 71 LMI---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
+M F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY+ ++
Sbjct: 57 VMASSGFQADVRALQKHLAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVL 116
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
GLD EGKGCV++YD +G E+ + + GS L+ LDNQ +
Sbjct: 117 GGLDNEGKGCVFTYDAVGSYEKVGYSSQGSGSTLIMPFLDNQ-----------------L 159
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
++ L ++A+ TP+ +A+ +VK F +A ERDIYTGD
Sbjct: 160 KSPSPLLLPALDAV------------------TPLSEPEAVDLVKTVFASATERDIYTGD 201
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
+ + + GI+ LRKD
Sbjct: 202 KLEIVILNASGIRREYMDLRKD 223
>gi|242082111|ref|XP_002445824.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
gi|241942174|gb|EES15319.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
Length = 219
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 130/257 (50%), Gaps = 51/257 (19%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPTYNFLM 72
F PY +NGGT VAVAG DY ++A+DTRLS GY+I +R+ SK L D +
Sbjct: 3 RFDPYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDHSKIAQLADKCVLASSG---- 58
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F I Q +Y H +NK MS ++A+++S +Y KRFFPYY ++AGLD
Sbjct: 59 -FQGDIKALQKALTAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDT 117
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
+GKGCV++YD +G ER + A G+ AL+ +LDNQ
Sbjct: 118 QGKGCVFTYDAVGSYERTGYSAQGTGSALMMPVLDNQ----------------------- 154
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL R+ TP+ A+ +VKD F +A ERDIYTGD + +
Sbjct: 155 --------LKSPSPLLLPARDA----VTPLSESDAVDLVKDVFASATERDIYTGDRLEIV 202
Query: 245 AITKDGIKEYNFPLRKD 261
I G LRKD
Sbjct: 203 VINSSGTHRECIELRKD 219
>gi|307107838|gb|EFN56080.1| hypothetical protein CHLNCDRAFT_22624 [Chlorella variabilis]
Length = 239
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 138/263 (52%), Gaps = 55/263 (20%)
Query: 13 IQHH--FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
++ H +SPY DNGGT VAVAG DY ++A+ TR+S GY+I TR +SK+ P
Sbjct: 18 VKQHATWSPYDDNGGTVVAVAGDDYCVVAASTRMSTGYSILTRNKSKILQ---LNPK--- 71
Query: 71 LMIFTITILPFQMYLHE------------HNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
+I + + Q LH+ H K M+ ++A+++S +Y KRFFPYYT +
Sbjct: 72 CVIASAGMQADQETLHKVLHSRHVTYQFNHRKPMACPAMAQLLSNTLYYKRFFPYYTFNL 131
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
AGLD EG+G VY+YD IG ER + G+ L+Q +LDNQ+
Sbjct: 132 CAGLDDEGRGAVYTYDAIGSYERVGYGCQGNGKELVQPVLDNQLKA-------------- 177
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
LAL + LSS +PLE+A+ +VK AF +A ERDIYTG
Sbjct: 178 --ASPLALPPQ-QWLSS------------------LPLEQAVDLVKGAFVSAGERDIYTG 216
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D V + ITKD IK L++D
Sbjct: 217 DDVEILIITKDCIKTDRLELKRD 239
>gi|414869634|tpg|DAA48191.1| TPA: proteasome subunit beta type [Zea mays]
Length = 219
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 132/257 (51%), Gaps = 51/257 (19%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPTYNFLM 72
F+PY +NGGT +AVAG DY ++A+DTRLS GY+I +R+ SK L D +
Sbjct: 3 RFNPYENNGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSG---- 58
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F I Q +Y H +NK MS ++A+++S +Y KRFFPYY ++AGLD
Sbjct: 59 -FQGDIKALQKALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDT 117
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
+GKGCV++YD +G ER + A G+ AL+ +LDNQ
Sbjct: 118 QGKGCVFTYDAVGSYERTGYSAQGTGSALMMPVLDNQ----------------------- 154
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL R+ TP+ A+ +VKD F +A ERDIYTGD + +
Sbjct: 155 --------LKSPSPLLLPARDA----VTPLSESDAVDLVKDVFASATERDIYTGDRLEIV 202
Query: 245 AITKDGIKEYNFPLRKD 261
I K G LRKD
Sbjct: 203 VINKSGTHREYIELRKD 219
>gi|357492211|ref|XP_003616394.1| Proteasome subunit beta type [Medicago truncatula]
gi|355517729|gb|AES99352.1| Proteasome subunit beta type [Medicago truncatula]
Length = 223
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 133/257 (51%), Gaps = 46/257 (17%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QH ++SPY +NGG+ VA+AG DY +IA+DTR+S GYNI TR+ SK+ +
Sbjct: 4 QHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKI--SHLAEKCVMASS 61
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F + Q Y H+HNK MS ++A+++S +Y KRFFPYY+ ++ GLD
Sbjct: 62 GFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDS 121
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + + GS L+ LDNQ
Sbjct: 122 EGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ----------------------- 158
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL Q+ V TP+ +A+ +VK F +A ERDIYTGD V +
Sbjct: 159 --------LKSPSPLLL--PAQDAV--TPLSETEAVDLVKTVFASATERDIYTGDKVEIV 206
Query: 245 AITKDGIKEYNFPLRKD 261
+ GI LRKD
Sbjct: 207 ILNASGIHRDFMDLRKD 223
>gi|357454307|ref|XP_003597434.1| Proteasome subunit beta type [Medicago truncatula]
gi|355486482|gb|AES67685.1| Proteasome subunit beta type [Medicago truncatula]
Length = 231
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 133/257 (51%), Gaps = 46/257 (17%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QH ++SPY +NGG+ VA+AG DY +IA+DTR+S GYNI TR+ SK+ +
Sbjct: 12 QHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKI--SHLAEKCVMASS 69
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F + Q Y H+HNK MS ++A+++S +Y KRFFPYY+ ++ GLD
Sbjct: 70 GFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDS 129
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + + GS L+ LDNQ
Sbjct: 130 EGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ----------------------- 166
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL Q+ V TP+ +A+ +VK F +A ERDIYTGD V +
Sbjct: 167 --------LKSPSPLLL--PAQDAV--TPLSEAEAVDLVKTVFASATERDIYTGDKVEIV 214
Query: 245 AITKDGIKEYNFPLRKD 261
+ GI LRKD
Sbjct: 215 ILNAGGIHREFMDLRKD 231
>gi|225719280|gb|ACO15486.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 239
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 46/259 (17%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRL-SAGYNIYTREQSKLF---DHYYYR 65
+ P F PY DNGGTT+ +AGPD+A+IASDTRL S GY+I +R K+F +
Sbjct: 20 KNPHSLSFQPYQDNGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVLG 79
Query: 66 PTYNFLMIFT-ITILPFQM--YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ + T + ++ +M Y + H K + T +LA++IS +Y +RF PYY ++AGL
Sbjct: 80 SCGCWCDVLTFVRVMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGL 139
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D G+GC+Y+YDP+G E+ G+S L+Q +LDN
Sbjct: 140 DENGQGCIYTYDPVGCIEKVTMSCSGASMELIQPILDN---------------------- 177
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
++ +N N K + ++++++++ D F +A ER I TGDG+
Sbjct: 178 -----------------IIDKKNMTNATKKDLTIDESVNLIHDCFVSATERQISTGDGII 220
Query: 243 LCAITKDGIKEYNFPLRKD 261
ITKDGI+ + LR+D
Sbjct: 221 FKIITKDGIETKSVGLRRD 239
>gi|225719776|gb|ACO15734.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 271
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 46/259 (17%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRL-SAGYNIYTREQSKLF---DHYYYR 65
+ P F PY DNGGTT+ +AGPD+A+IASDTRL S GY+I +R K+F +
Sbjct: 52 KNPHSLSFQPYQDNGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVLG 111
Query: 66 PTYNFLMIFT-ITILPFQM--YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ + T + ++ +M Y + H K + T +LA++IS +Y +RF PYY ++AGL
Sbjct: 112 SCGCWCDVLTFVRVMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGL 171
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D G+GC+Y+YDP+G E+ G+S L+Q +LDN
Sbjct: 172 DENGQGCIYTYDPVGCIEKVTMSCSGASMELIQPILDN---------------------- 209
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
++ +N N K + ++++++++ D F +A ER I TGDG+
Sbjct: 210 -----------------IIDKKNMTNATKKDLTIDESVNLIHDCFVSATERQISTGDGII 252
Query: 243 LCAITKDGIKEYNFPLRKD 261
ITKDGI+ + LR+D
Sbjct: 253 FKIITKDGIETKSVGLRRD 271
>gi|218201500|gb|EEC83927.1| hypothetical protein OsI_30000 [Oryza sativa Indica Group]
Length = 219
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 128/257 (49%), Gaps = 51/257 (19%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPTYNFLM 72
F Y +NGGT VAVAG DY ++A+DTRLS GY+I +R+ SK L D +
Sbjct: 3 RFEAYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSG---- 58
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F + Q +Y H HNK MS ++A+++S +Y KRFFPYY ++ GLD
Sbjct: 59 -FQGDVKALQRNLAAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS 117
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + A G+ AL+ +LDNQ
Sbjct: 118 EGKGCVFTYDAVGSYERTGYSAQGTGAALMMPVLDNQ----------------------- 154
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL R+ TP+ A+ +VKD F +A ERDIYTGD + +
Sbjct: 155 --------LKSPSPLLLPARDA----VTPLSQSDAVDLVKDVFASATERDIYTGDKLEIV 202
Query: 245 AITKDGIKEYNFPLRKD 261
I G LRKD
Sbjct: 203 VINSAGSHREFIELRKD 219
>gi|224033845|gb|ACN35998.1| unknown [Zea mays]
Length = 221
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 128/257 (49%), Gaps = 59/257 (22%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL 79
Y +NGGT VA+AG DY ++A+DTRLS GY+I TR+ SK+ D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICD---------LADKCVLASS 59
Query: 80 PFQ---------------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
FQ +Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD
Sbjct: 60 GFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS 119
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGK CV++YD +G ER + A G+ L+ +LDNQ
Sbjct: 120 EGKECVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQ----------------------- 156
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL R+ TP+ +AI +VKD F +A ERDIYTGD + +
Sbjct: 157 --------LKSPSPLLLPARDA----VTPLSESEAIDLVKDVFASATERDIYTGDKLEIV 204
Query: 245 AITKDGIKEYNFPLRKD 261
I K G K LRKD
Sbjct: 205 VINKVGTKREYIDLRKD 221
>gi|115477445|ref|NP_001062318.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|42407968|dbj|BAD09106.1| putative proteasome subunit beta type 1 [Oryza sativa Japonica
Group]
gi|113624287|dbj|BAF24232.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|215678609|dbj|BAG92264.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640910|gb|EEE69042.1| hypothetical protein OsJ_28037 [Oryza sativa Japonica Group]
Length = 219
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 128/257 (49%), Gaps = 51/257 (19%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPTYNFLM 72
F Y +NGGT VAVAG DY ++A+DTRLS GY+I +R+ SK L D +
Sbjct: 3 RFEVYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSG---- 58
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F + Q +Y H HNK MS ++A+++S +Y KRFFPYY ++ GLD
Sbjct: 59 -FQGDVKALQRNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS 117
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + A G+ AL+ +LDNQ
Sbjct: 118 EGKGCVFTYDAVGSYERTGYSAQGTGAALMMPVLDNQ----------------------- 154
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL R+ TP+ A+ +VKD F +A ERDIYTGD + +
Sbjct: 155 --------LKSPSPLLLPARDA----VTPLSQSDAVDLVKDVFASATERDIYTGDKLEIV 202
Query: 245 AITKDGIKEYNFPLRKD 261
I G LRKD
Sbjct: 203 VINSAGSHREFIELRKD 219
>gi|325184015|emb|CCA18472.1| proteasome subunit beta putative [Albugo laibachii Nc14]
Length = 247
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 143/266 (53%), Gaps = 49/266 (18%)
Query: 5 TKQILETPIQHH---FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD- 60
TK+ + HH + PY NGGT +A+AGPDY +IA D+RLS GY+I +R + KL
Sbjct: 22 TKKAVSGTHNHHRAAWEPYDFNGGTALAIAGPDYVVIAGDSRLSTGYSILSRNEKKLQQL 81
Query: 61 ---HYYYRP-TYN-FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYT 115
P ++N + + + L QMY+H++ ++ST +L++++ +Y +RFFPYY
Sbjct: 82 TSTSVLASPGSHNDVIQLRGMLQLQIQMYMHDNQAIISTENLSQVLMNTLYSRRFFPYYA 141
Query: 116 STIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSV 175
++AG+D +GKG VYSYD IG +R + A GS G L+ LLDN +++H S+
Sbjct: 142 FCVLAGIDKDGKGAVYSYDAIGSYDRVSRGAVGSGGHLMIPLLDN---LVEHYSRTDPK- 197
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDI 235
RE F QE + ++KDAF A ERDI
Sbjct: 198 ------------RE-------------FTQQETKE-----------IIKDAFITAGERDI 221
Query: 236 YTGDGVHLCAITKDGIKEYNFPLRKD 261
YTGD V + IT GI++ +F L+KD
Sbjct: 222 YTGDCVEIMTITASGIEKEHFELKKD 247
>gi|79315846|ref|NP_001030905.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646592|gb|AEE80113.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 133/257 (51%), Gaps = 46/257 (17%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QH ++SPY +NGGT VA+AG DY +IA+DTR+S GY+I +R+ SK+ H
Sbjct: 4 QHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKI--HKLADRAVLSSS 61
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD
Sbjct: 62 GFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE 121
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + A GS L+ LDNQ
Sbjct: 122 EGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQ----------------------- 158
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL ++ TP+ +A+ +VK F +A ERDIYT + + +
Sbjct: 159 --------LKSPSPLLLPKQDSN----TPLSEAEAVDLVKTVFASATERDIYTVNKLEIM 206
Query: 245 AITKDGIKEYNFPLRKD 261
+ DGIK LRKD
Sbjct: 207 ILKADGIKTELMDLRKD 223
>gi|388496148|gb|AFK36140.1| unknown [Medicago truncatula]
Length = 237
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 132/256 (51%), Gaps = 46/256 (17%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QH ++SPY +NGG+ VA+AG DY +IA+DTR+S GYNI TR+ SK+ +
Sbjct: 4 QHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKI--SHLAEKCVMASS 61
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F + Q Y H+HNK MS ++A+++S +Y KRFFPYY+ ++ GLD
Sbjct: 62 GFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDS 121
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + + GS L+ LDNQ
Sbjct: 122 EGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ----------------------- 158
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL Q+ V TP+ +A+ +VK F +A ERDIYTGD V +
Sbjct: 159 --------LKSPSPLLL--PAQDAV--TPLSEAEAVDLVKTVFASATERDIYTGDKVEIV 206
Query: 245 AITKDGIKEYNFPLRK 260
+ GI LRK
Sbjct: 207 ILNAGGIHREFMDLRK 222
>gi|412993855|emb|CCO14366.1| predicted protein [Bathycoccus prasinos]
Length = 243
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 134/255 (52%), Gaps = 42/255 (16%)
Query: 14 QHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKL--FDHYYYRPTYNF 70
QH +SPY +NGGT +AVAG DY I A+DTR+S GY+I TR+ +K+ + F
Sbjct: 24 QHATWSPYDNNGGTVMAVAGEDYVICAADTRMSTGYSIMTRQYTKVDEMSPKTLMASAGF 83
Query: 71 LM-IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ T+ L Y +NK + + A+M+S +Y +RFFPYY I+AGLD EG
Sbjct: 84 MADAATLKKLLKGRCDQYQFANNKPIGCVAFAQMLSNTLYMRRFFPYYAFNIVAGLDAEG 143
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG V++YD +G ER N+ GS L+ +LDNQ+ + L L
Sbjct: 144 KGAVFTYDAVGSYERTNYSCQGSGQQLIMPVLDNQLKTVSP----------------LVL 187
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
A+SS TP+ E+AI ++KD F A ERDIYTGD V L +
Sbjct: 188 P----AVSS---------------ATPLSEEEAIDLIKDCFATAGERDIYTGDAVELFVM 228
Query: 247 TKDGIKEYNFPLRKD 261
KDGI++ PL+ D
Sbjct: 229 NKDGIRKETMPLKTD 243
>gi|195611928|gb|ACG27794.1| proteasome subunit beta type 1 [Zea mays]
Length = 221
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 127/250 (50%), Gaps = 45/250 (18%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL 79
Y +NGGT VA+AG DY ++A+DTRLS GY+I TR+ SK+ D F I
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICD--LADKCVLASSGFQGDIK 66
Query: 80 PFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
Q +Y +HNK MS ++A+++S +Y KRFFPYY ++ GLD EGKGCV+
Sbjct: 67 ALQKNLAARELLYQXQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVF 126
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
+YD +G ER + A G+ L+ +LDNQ
Sbjct: 127 TYDAVGSYERTGYSAQGTGSTLIMPVLDNQ------------------------------ 156
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
L S +LL R+ TP+ +AI +VK F +A ERDIYTGD + + I K G
Sbjct: 157 -LKSPSPLLLPVRDA----VTPLSESEAIDLVKGVFASATERDIYTGDKLEIVVINKAGT 211
Query: 252 KEYNFPLRKD 261
K LRKD
Sbjct: 212 KREYIDLRKD 221
>gi|303278464|ref|XP_003058525.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459685|gb|EEH56980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 220
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 132/254 (51%), Gaps = 52/254 (20%)
Query: 13 IQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
++ ++SPY +NGGT +AVAG DY + A+DTR+S GY++ TR+ K+ + T +M
Sbjct: 1 MRQNWSPYDNNGGTVLAVAGEDYVVCAADTRMSTGYSVLTRDYKKI-----EKMTEKCVM 55
Query: 73 I---FTITILPFQM--------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
F + + Y ++NK M S A+M+S +Y +RFFPYYT I+AG
Sbjct: 56 ASAGFMADAVTLKKTLKARCVSYEFQNNKEMGCVSFAQMLSNTLYYRRFFPYYTFNIVAG 115
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
LD EGKG V++YD +G ER N+ GS L+ +LDNQ+ +
Sbjct: 116 LDKEGKGAVFTYDAVGSYERTNYSCQGSGQGLIMPVLDNQLKTVSP-------------- 161
Query: 182 HDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGV 241
L L + +A TP+ +A+ +VKD F A ERDIYTGD V
Sbjct: 162 --LVLPAQSSA-------------------TPLSESEAVDLVKDCFATAGERDIYTGDSV 200
Query: 242 HLCAITKDGI-KEY 254
+ I KDG+ KEY
Sbjct: 201 EIWIINKDGLRKEY 214
>gi|328849593|gb|EGF98770.1| hypothetical protein MELLADRAFT_73512 [Melampsora larici-populina
98AG31]
Length = 239
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 138/260 (53%), Gaps = 32/260 (12%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR---------EQSKLFDHY 62
P+ H F+PY+DNGGT +A++ +A+IA DTR S GY+I +R +Q + +
Sbjct: 2 PVGHQFNPYTDNGGTILAISSKSFAVIAGDTRQSEGYSIQSRYAPKVTQLTDQCCIAVNG 61
Query: 63 YYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ + ++ Y H H+ + S S+A++I M+YG+RFFPYY I+AG+
Sbjct: 62 FAADAKELVKQIKQRLV---WYNHTHSSMPSLQSIARLIQTMLYGRRFFPYYAYVILAGI 118
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D +G G VYS+DP+G ER + RA G++ +L+Q LDNQVG K M
Sbjct: 119 DRDGTGAVYSFDPVGSYERESCRAAGAAQSLVQPFLDNQVG-----GKNM---------- 163
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
R+ N + + + G + +PLE+ ++V DAFT A ER I GDG+
Sbjct: 164 ----IRDPNGPPAPVEPVYGKGESYTPPRADLPLERVEALVTDAFTGATERHIEVGDGLE 219
Query: 243 LCAI-TKDGIKEYNFPLRKD 261
+ I G++ PL++D
Sbjct: 220 IFVIEVGKGVRVIQKPLKRD 239
>gi|226533094|ref|NP_001147213.1| proteasome subunit beta type 1 [Zea mays]
gi|195608582|gb|ACG26121.1| proteasome subunit beta type 1 [Zea mays]
Length = 219
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 131/257 (50%), Gaps = 51/257 (19%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPTYNFLM 72
F+PY +NGGT +AVAG DY ++A+DTRLS GY+I +R+ SK L D +
Sbjct: 3 RFNPYENNGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSG---- 58
Query: 73 IFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F I Q +Y H +NK MS ++A+++S +Y KRFFPYY ++AGLD
Sbjct: 59 -FQGDIKALQKALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDT 117
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
+GKGCV++YD +G ER + A G+ AL+ +LDNQ
Sbjct: 118 QGKGCVFTYDAVGSYERTGYSAQGTGSALMMPVLDNQ----------------------- 154
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL R+ TP+ A+ +VKD F +A ERDIYTGD + +
Sbjct: 155 --------LKSPSPLLLPARDA----VTPLSESDAVDLVKDVFASATERDIYTGDRLEIV 202
Query: 245 AITKDGIKEYNFPLRKD 261
I G LRKD
Sbjct: 203 VINSFGTHRECIELRKD 219
>gi|405121415|gb|AFR96184.1| proteasome subunit [Cryptococcus neoformans var. grubii H99]
Length = 272
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 130/255 (50%), Gaps = 58/255 (22%)
Query: 12 PIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---------H 61
P+QHH F+PYSDNGG+ +A+AG D++IIA DTR S GY+I TR K++ +
Sbjct: 18 PVQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATN 77
Query: 62 YYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+ NF+ + + Y H HNK M S+A+MI M+YGKRFFPYY I+ G
Sbjct: 78 GFAADGNNFVKRVKQRL---EWYEHAHNKSMGLKSIARMIQTMLYGKRFFPYYVYNILGG 134
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
++ +G G VYS+DP+G ER RA G++ +L+Q LDNQV
Sbjct: 135 IEEDGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQV------------------- 175
Query: 182 HDLALTREINALSSKLTILLGFRNQE-NVDKTP-----VPLEKAISVVKDAFTAAAERDI 235
FRNQ+ P +PL +S+V D+FT+A ER I
Sbjct: 176 --------------------YFRNQQPEPGAAPFVPGNLPLSTVLSLVVDSFTSATERHI 215
Query: 236 YTGDGVHLCAITKDG 250
GDG+ + + G
Sbjct: 216 EVGDGMEIYVVMAKG 230
>gi|291230976|ref|XP_002735446.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 180
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 107/179 (59%), Gaps = 39/179 (21%)
Query: 83 MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERA 142
MY ++H+K MS ++A MIS ++Y +RFFPYY I+AGLD EGKGCVYSYDP+G ER
Sbjct: 41 MYKNDHHKEMSCPAIAAMISTILYYRRFFPYYVYNIVAGLDTEGKGCVYSYDPVGSYERE 100
Query: 143 NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLG 202
++R+ GS+ A+LQ LLDNQ+ G
Sbjct: 101 SYRSAGSASAMLQPLLDNQI---------------------------------------G 121
Query: 203 FRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
F+NQE V++ + +KA+++ KD F +AAERDIYTGD + + I K+GI +FPLR+D
Sbjct: 122 FKNQEGVEQVALSRDKAVNLAKDVFISAAERDIYTGDSIIINVIDKNGITSDSFPLRRD 180
>gi|253747271|gb|EET02070.1| Proteasome subunit beta type 1 [Giardia intestinalis ATCC 50581]
Length = 220
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 133/268 (49%), Gaps = 63/268 (23%)
Query: 7 QILETPIQH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYR 65
+ L PI+ F PY+DNGGT +A+AGPD+AIIA DTRLS GYNI +R K+F
Sbjct: 3 ETLSIPIKDLDFDPYTDNGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVF------ 56
Query: 66 PTYNFLMIFTITILPFQMYLHEHNKVMST------------TSLAKMISIMMYGKRFFPY 113
P + ++ + L +H K+ ST +++S MMY +R FP+
Sbjct: 57 PVTDKIVYAASGMHADVQRLIKHMKIESTDYHLKTQREMAIEQFTRLLSAMMYYRRSFPW 116
Query: 114 YTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMK 173
YTS+I+AG+D EGKG VYSYD IG T R + + G+ A++ +LD +
Sbjct: 117 YTSSIVAGIDSEGKGAVYSYDVIGSTLRTRYGSAGTGNAMICPILDEAI----------- 165
Query: 174 SVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAER 233
+ D +TRE A +++ AF + AER
Sbjct: 166 -----LPKSDAEITREF----------------------------AFELIQSAFKSCAER 192
Query: 234 DIYTGDGVHLCAITKDGIKEYNFPLRKD 261
DIYTGD V I+ DGI+E F LRKD
Sbjct: 193 DIYTGDSVVAMCISADGIQERTFELRKD 220
>gi|443895548|dbj|GAC72894.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7 [Pseudozyma
antarctica T-34]
Length = 292
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 123/246 (50%), Gaps = 51/246 (20%)
Query: 13 IQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNF 70
+ H FSPY NGG+ AV G D+ +IASDTR S GYNI TR + K+F + T F
Sbjct: 25 VGHQFSPYDSNGGSIAAVCGSDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGF 84
Query: 71 L----MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ + +MY H H + M S+A+MIS M+YGKRFFPYY I+ GLD +G
Sbjct: 85 AADAEALVSRIRQRLEMYRHAHGRSMPLHSIARMISTMLYGKRFFPYYVYNILGGLDEQG 144
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG VYS+DP+G ER RA G++ +L+Q DNQ+
Sbjct: 145 KGAVYSFDPVGSYEREFCRAAGAAQSLIQPFFDNQI------------------------ 180
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVP------LEKAISVVKDAFTAAAERDIYTGDG 240
FRNQ + + VP L + + +V D+FT+A ER I GDG
Sbjct: 181 ---------------MFRNQSDTPERKVPTPGQMTLPEVLKIVIDSFTSATERHIEVGDG 225
Query: 241 VHLCAI 246
+ + +
Sbjct: 226 LEVFVV 231
>gi|58268196|ref|XP_571254.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113318|ref|XP_774684.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257328|gb|EAL20037.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227489|gb|AAW43947.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 272
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 130/255 (50%), Gaps = 58/255 (22%)
Query: 12 PIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---------H 61
P+QHH F+PYSDNGG+ +A+AG D++IIA DTR S GY+I TR K++ +
Sbjct: 18 PVQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATN 77
Query: 62 YYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+ NF+ + + Y H HNK M S+A+MI M+YGKRFFPYY I+ G
Sbjct: 78 GFAADGNNFVKRVKQRL---EWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGG 134
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
++ +G G VYS+DP+G ER RA G++ +L+Q LDNQV
Sbjct: 135 IEEDGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQV------------------- 175
Query: 182 HDLALTREINALSSKLTILLGFRNQE-NVDKTP-----VPLEKAISVVKDAFTAAAERDI 235
F+NQ+ P +PL +S+V D+FT+A ER I
Sbjct: 176 --------------------YFKNQQPEPGAAPFVPGNLPLSTVLSLVVDSFTSATERHI 215
Query: 236 YTGDGVHLCAITKDG 250
GDG+ + + G
Sbjct: 216 EVGDGMEIYVVMAKG 230
>gi|401402253|ref|XP_003881203.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
gi|325115615|emb|CBZ51170.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
Length = 246
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 129/265 (48%), Gaps = 58/265 (21%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYR 65
L P++ FSPY +NGGT V VAG D+A+ DTRLS G++IY+R QSK L D
Sbjct: 28 LAAPMERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRFQSKITKLTDKVVLA 87
Query: 66 PT---------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
+ +N L I + Y H+H S ++A+++S M+Y +RFFP+YT
Sbjct: 88 TSGMQADKTTLHNLLQIR------IEQYTHQHRHPPSLNAIAQLLSTMLYSRRFFPFYTF 141
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
++ G+D GKG VY YD IG E A + G+ L+ +LDNQ+
Sbjct: 142 NVLCGIDENGKGAVYGYDAIGSFEAARYNCAGTGAHLIMPVLDNQIS------------- 188
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
RN + +K P+ E+ + ++K A +A ERDI+
Sbjct: 189 ---------------------------RNNQQGEKAPLTREQVVDIIKSAVASAGERDIF 221
Query: 237 TGDGVHLCAITKDGIKEYNFPLRKD 261
TGD + I++ GI++ LR D
Sbjct: 222 TGDQAEVVMISQSGIEKTLMDLRAD 246
>gi|221484304|gb|EEE22600.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
Length = 359
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 46/259 (17%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYR 65
L P++ FSPY +NGGT V VAG D+A+ DTRLS G++IY+R QSK L D
Sbjct: 141 LAAPMERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLA 200
Query: 66 PT---YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ + + + + + Y H+H S ++A+++S ++Y +RFFP+YT ++ G+
Sbjct: 201 TSGMEADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGI 260
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D GKG VY YD IG E + + G+ L+ +LDNQ+
Sbjct: 261 DENGKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQIS------------------- 301
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
RN + +K P+ E+ + +VK A +A ERDI+TGD
Sbjct: 302 ---------------------RNNQQGEKAPLTRERIVEIVKSAVASAGERDIFTGDQAE 340
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ I++ GI++ LR D
Sbjct: 341 VVMISQSGIEKTLMDLRAD 359
>gi|19115641|ref|NP_594729.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe 972h-]
gi|17380232|sp|Q9UQY2.1|PSB6_SCHPO RecName: Full=Probable proteasome subunit beta type-6
gi|5734483|emb|CAB52716.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe]
gi|6681370|dbj|BAA88692.1| catalytic subunit (C5) of proteasome [Schizosaccharomyces pombe]
Length = 225
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 129/254 (50%), Gaps = 37/254 (14%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT--- 67
Q F PY NGGTTVA+AG +AI+A DTR GYNI TR Q ++ D +
Sbjct: 3 QSQFDPYVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFE 62
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ L + +Y H + MS S A M+ ++YGKRFFPYY T +AG+D EGK
Sbjct: 63 ADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGK 122
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G +YS+DP+G ER RAGGS+ + LDNQV + H+
Sbjct: 123 GEIYSFDPVGSYEREWCRAGGSAANFITPFLDNQVNL--HNQ------------------ 162
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
+ G +E + + LE+A+ + DAFT+A ER I GD V + IT
Sbjct: 163 -----------YVPGSHGKERKPRRLLKLEEAMKITTDAFTSAGERHIEVGDSVLVKIIT 211
Query: 248 KDGIKEYNFPLRKD 261
K+G++ PL+KD
Sbjct: 212 KEGVETRIIPLKKD 225
>gi|221505718|gb|EEE31363.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 361
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 46/259 (17%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYR 65
L P++ FSPY +NGGT V VAG D+A+ DTRLS G++IY+R QSK L D
Sbjct: 143 LAAPMERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLA 202
Query: 66 PT---YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ + + + + + Y H+H S ++A+++S ++Y +RFFP+YT ++ G+
Sbjct: 203 TSGMEADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGI 262
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D GKG VY YD IG E + + G+ L+ +LDNQ+
Sbjct: 263 DENGKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQIS------------------- 303
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
RN + +K P+ E+ + +VK A +A ERDI+TGD
Sbjct: 304 ---------------------RNNQQGEKAPLTRERIVEIVKSAVASAGERDIFTGDQAE 342
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ I++ GI++ LR D
Sbjct: 343 VVMISQSGIEKTLMDLRAD 361
>gi|256075409|ref|XP_002574012.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
gi|353229361|emb|CCD75532.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
Length = 212
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 138/256 (53%), Gaps = 56/256 (21%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKLFDHYYYRPTYNFLM--- 72
F+PYS NGGT + +AG D+++IASDTRL G + I +R +LF P N L
Sbjct: 2 FNPYSSNGGTVMGIAGNDFSLIASDTRLCDGDFVILSRNSPRLFK---LGPG-NILGCAG 57
Query: 73 ----IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ T+T L + + ++H K +ST +LA ++S+ +Y +RFFP+Y S ++ GLD E
Sbjct: 58 FHGDVLTLTKLLENKVKTFRYDHGKNISTKALAGLLSVTLYNRRFFPFYVSNVLVGLD-E 116
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G+G +YSYDP+G E +RA GSS A+LQ LD+ VG +SK S L
Sbjct: 117 GRGVLYSYDPVGSYESEGYRASGSSSAILQPFLDSTVG--NKTSKYHVSRL--------- 165
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
DK E A+ + D F +AAERDI GD V +C
Sbjct: 166 ------------------------DK-----ETAVKLTHDIFISAAERDIQCGDSVIICT 196
Query: 246 ITKDGIKEYNFPLRKD 261
ITKDG+ E ++PLR+D
Sbjct: 197 ITKDGLSEVSYPLRRD 212
>gi|237838257|ref|XP_002368426.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
gi|211966090|gb|EEB01286.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
Length = 359
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 46/259 (17%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYR 65
L P++ FSPY +NGGT V VAG D+A+ DTRLS G++IY+R QSK L D
Sbjct: 141 LAAPMERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLA 200
Query: 66 PT---YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ + + + + + Y H+H S ++A+++S ++Y +RFFP+YT ++ G+
Sbjct: 201 TSGMEADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGI 260
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D GKG VY YD IG E + + G+ L+ +LDNQ+
Sbjct: 261 DENGKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQIS------------------- 301
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
RN + +K P+ E+ + +VK A +A ERDI+TGD
Sbjct: 302 ---------------------RNNQQGEKAPLTRERIVEIVKSAVASAGERDIFTGDQAE 340
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ I++ GI++ LR D
Sbjct: 341 VVMISQSGIEKTLMDLRAD 359
>gi|321260412|ref|XP_003194926.1| 20S proteasome beta-type subunit; Pre7p [Cryptococcus gattii WM276]
gi|317461398|gb|ADV23139.1| 20S proteasome beta-type subunit, putative; Pre7p [Cryptococcus
gattii WM276]
Length = 272
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 130/251 (51%), Gaps = 58/251 (23%)
Query: 12 PIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---------H 61
P+QHH F+PYSDNGG+ +A+AG D++IIA DTR S GY+I TR K++ +
Sbjct: 18 PVQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATN 77
Query: 62 YYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+ NF+ + + Y H HNK MS S+A+MI M+YGKRFFPYY I+ G
Sbjct: 78 GFAADGNNFVKRVKQRL---EWYEHAHNKPMSLKSIARMIQTMLYGKRFFPYYVYNILGG 134
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
++ +G G VYS+DP+G ER RA G++ +L+Q LDNQV
Sbjct: 135 IEEDGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQV------------------- 175
Query: 182 HDLALTREINALSSKLTILLGFRNQE-NVDKTP-----VPLEKAISVVKDAFTAAAERDI 235
F+NQ+ P +PL +S+V D+FT+A ER I
Sbjct: 176 --------------------YFKNQQPEPGAAPFVPGNLPLSTVLSLVVDSFTSATERHI 215
Query: 236 YTGDGVHLCAI 246
GDG+ + +
Sbjct: 216 EVGDGMEIYVV 226
>gi|3114281|pdb|1RYP|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114295|pdb|1RYP|1 Chain 1, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513424|pdb|1G65|L Chain L, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513438|pdb|1G65|Z Chain Z, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|14488817|pdb|1FNT|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488831|pdb|1FNT|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150388|pdb|1JD2|L Chain L, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150395|pdb|1JD2|S Chain S, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|75765711|pdb|1Z7Q|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765725|pdb|1Z7Q|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279379|pdb|2F16|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279393|pdb|2F16|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032213|pdb|2FAK|L Chain L, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032227|pdb|2FAK|Z Chain Z, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490854|pdb|2GPL|L Chain L, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490868|pdb|2GPL|Z Chain Z, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016378|pdb|3D29|L Chain L, Proteasome Inhibition By Fellutamide B
gi|190016392|pdb|3D29|Z Chain Z, Proteasome Inhibition By Fellutamide B
gi|197725332|pdb|3E47|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725346|pdb|3E47|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939223|pdb|3DY3|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939237|pdb|3DY3|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939251|pdb|3DY4|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939265|pdb|3DY4|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828248|pdb|3GPJ|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828262|pdb|3GPJ|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588332|pdb|3GPT|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588346|pdb|3GPT|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588360|pdb|3GPW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588374|pdb|3GPW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588554|pdb|3HYE|L Chain L, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588568|pdb|3HYE|Z Chain Z, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508234|pdb|1VSY|M Chain M, Proteasome Activator Complex
gi|298508248|pdb|1VSY|1 Chain 1, Proteasome Activator Complex
gi|298508450|pdb|3L5Q|Q Chain Q, Proteasome Activator Complex
gi|298508464|pdb|3L5Q|3 Chain 3, Proteasome Activator Complex
gi|330689392|pdb|3MG4|L Chain L, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689406|pdb|3MG4|Z Chain Z, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361155|pdb|3MG0|L Chain L, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361169|pdb|3MG0|Z Chain Z, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892352|pdb|3OKJ|L Chain L, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892366|pdb|3OKJ|Z Chain Z, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780430|pdb|3OEU|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780444|pdb|3OEU|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780458|pdb|3OEV|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780472|pdb|3OEV|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610683|pdb|3TDD|L Chain L, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610697|pdb|3TDD|Z Chain Z, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545857|pdb|3SHJ|L Chain L, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545871|pdb|3SHJ|Z Chain Z, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|378792252|pdb|3UN4|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792266|pdb|3UN4|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792286|pdb|3UN8|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792300|pdb|3UN8|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980827|pdb|3SDI|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980841|pdb|3SDI|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980855|pdb|3SDK|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980869|pdb|3SDK|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550743|pdb|4GK7|L Chain L, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550757|pdb|4GK7|Z Chain Z, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072203|pdb|4G4S|M Chain M, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973871|pdb|4FZC|L Chain L, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973885|pdb|4FZC|Z Chain Z, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973899|pdb|4FZG|L Chain L, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973913|pdb|4FZG|Z Chain Z, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302350|pdb|4INR|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302364|pdb|4INR|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302378|pdb|4INT|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302392|pdb|4INT|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302406|pdb|4INU|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302420|pdb|4INU|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 222
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 135/253 (53%), Gaps = 38/253 (15%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTYNFLMI 73
F+PY DNGGT + +AG D+A++A DTR Y+I +R + K+FD F
Sbjct: 1 QFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAAD 60
Query: 74 FTITILPFQ----MYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
+ F+ Y +HN K +S S A+ I ++YGKRFFPYY TIIAGLD +GKG
Sbjct: 61 GDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKG 120
Query: 129 CVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
VYS+DP+G ER RAGG++ +L+ LDNQV Q + G + +
Sbjct: 121 AVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----KNQYEPGTNG------KVKK 170
Query: 189 EINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
+ LS +E+ I +V+D+FT+A ER I GDG+ + +TK
Sbjct: 171 PLKYLS---------------------VEEVIKLVRDSFTSATERHIQVGDGLEILIVTK 209
Query: 249 DGIKEYNFPLRKD 261
DG+++ + L++D
Sbjct: 210 DGVRKEFYELKRD 222
>gi|330791448|ref|XP_003283805.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
gi|325086304|gb|EGC39696.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
Length = 236
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 143/270 (52%), Gaps = 48/270 (17%)
Query: 1 MALVTKQILETPIQH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLS-AGYNIYTREQSKL 58
++ + +Q + PI H F Y DNGGT +AVAG DY +IA DTR+S GY I TR +K+
Sbjct: 6 LSALPEQSKQQPINHGRFEAYVDNGGTVMAVAGKDYCVIAGDTRMSDGGYGIQTRHYTKV 65
Query: 59 FD--HYYYRPTYNFLMIFTITI-----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFF 111
F + T + + TI + L + Y EH K MST ++A+ +S +Y KRFF
Sbjct: 66 FQLTNKCVLAT-SGMQADTIALQKRLKLMLETYQKEHGKPMSTPAIAQFLSNTLYYKRFF 124
Query: 112 PYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQ 171
PYYT ++AG+D +G+G +++YD +G ER + + GS L+ LLDNQV +K+
Sbjct: 125 PYYTFNLVAGVDEKGEGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQV------AKR 178
Query: 172 MKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAA 231
+ ++ G N D V ++ +S VKDA T+A
Sbjct: 179 NQQIIQG-----------------------------NGD---VSCDQVVSFVKDAITSAG 206
Query: 232 ERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
ERDIYTGD + + KDG++ F L+ D
Sbjct: 207 ERDIYTGDFADIVVVDKDGVRWEKFELKLD 236
>gi|71018283|ref|XP_759372.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
gi|46099097|gb|EAK84330.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
Length = 356
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 122/243 (50%), Gaps = 51/243 (20%)
Query: 13 IQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNF 70
+ H FSPY NGG+ AV G D+ +IASDTR S GYNI TR + K+F + T F
Sbjct: 93 VGHQFSPYDSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGF 152
Query: 71 LM----IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ + +MY H H + M S+A+MIS ++YGKRFFPYY I+ GLD EG
Sbjct: 153 AADAEALVSHVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLDEEG 212
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG VYS+DP+G ER RA G++ +L+Q DNQ+
Sbjct: 213 KGAVYSFDPVGSYEREFCRAAGAAQSLIQPFFDNQI------------------------ 248
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVP------LEKAISVVKDAFTAAAERDIYTGDG 240
FRNQ + + VP L + + +V D+FT+A ER I GDG
Sbjct: 249 ---------------MFRNQTSTPERTVPTPGQMTLGEVLKIVVDSFTSATERHIEVGDG 293
Query: 241 VHL 243
+ +
Sbjct: 294 LEV 296
>gi|308159821|gb|EFO62339.1| Proteasome subunit beta type 1 [Giardia lamblia P15]
Length = 214
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 130/252 (51%), Gaps = 52/252 (20%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFL-- 71
F PY+DNGGT +A+AGPD+AIIA DTRLS GYNI +R K+F D Y +
Sbjct: 8 FDPYTDNGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADV 67
Query: 72 --MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
+I + I + YL ++ + +++S MMY +R FP+YTS+I+AG+D EGKG
Sbjct: 68 QRLIKHMKIESTEYYLKTQKEI-AIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGA 126
Query: 130 VYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
VYSYD IG T R + + G+ A++ +LD + + ++ +TRE
Sbjct: 127 VYSYDVIGSTLRTRYGSAGTGNAMICPILDEAI----------------LSKNEAEITRE 170
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
A +++ AF + AERDIYTGD V I+ D
Sbjct: 171 F----------------------------AFELIQSAFRSCAERDIYTGDSVVAMCISAD 202
Query: 250 GIKEYNFPLRKD 261
GI+E F LRKD
Sbjct: 203 GIQERTFELRKD 214
>gi|255076203|ref|XP_002501776.1| predicted protein [Micromonas sp. RCC299]
gi|226517040|gb|ACO63034.1| predicted protein [Micromonas sp. RCC299]
Length = 229
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 130/249 (52%), Gaps = 44/249 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKL--FDHYYYRPTYNFL 71
+ ++SPY +NGGT +AVAG DY + A+DTR+S GYNI TR+ K+ + F
Sbjct: 11 RANWSPYDNNGGTVLAVAGEDYVVCAADTRMSTGYNILTRDYKKIDQMSDKCVLASAGF- 69
Query: 72 MIFTITILP-----FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
M +T+ Y +++K M S A+M+S +Y +RFFPYYT I+AGLD EG
Sbjct: 70 MADAVTLKKTLKARCTTYEFQNDKPMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDAEG 129
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG V++YD +G ER N+ GS L+ +LDNQ+ + L L
Sbjct: 130 KGAVFTYDAVGSYERTNYSCQGSGQGLIMPVLDNQLKTVSP----------------LVL 173
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
+ +A TP+ +A+ +VKD F A ERDIYTGD V + I
Sbjct: 174 PAQSSA-------------------TPLSESEAVDLVKDCFATAGERDIYTGDTVEIWII 214
Query: 247 TKDGI-KEY 254
KDG+ KEY
Sbjct: 215 NKDGVRKEY 223
>gi|388851426|emb|CCF54828.1| probable PRE7-20S proteasome subunit(beta6) [Ustilago hordei]
Length = 291
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 126/257 (49%), Gaps = 51/257 (19%)
Query: 13 IQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNF 70
+ H FSPY NGG+ AV G D+ +IASDTR S GYNI TR + K+F + T F
Sbjct: 26 VGHQFSPYDSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGF 85
Query: 71 LM----IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ + +MY H H + M S+A+MIS ++YGKRFFPYY I+ GLD EG
Sbjct: 86 AADAEALVSRVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLDEEG 145
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG VYS+DP+G ER RA G++ +L+Q DNQ+
Sbjct: 146 KGAVYSFDPVGSYEREFCRAAGAAQSLIQPFFDNQI------------------------ 181
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVP------LEKAISVVKDAFTAAAERDIYTGDG 240
F+NQ + + VP L + + +V D+FT+A ER I GDG
Sbjct: 182 ---------------MFKNQTSTPEHKVPEPGQMTLPEVLKIVVDSFTSATERHIEVGDG 226
Query: 241 VHLCAITKDGIKEYNFP 257
+ + + K + P
Sbjct: 227 LEVFVVRTPAAKAADGP 243
>gi|281210614|gb|EFA84780.1| proteasome subunit beta type 1 [Polysphondylium pallidum PN500]
Length = 235
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 133/266 (50%), Gaps = 58/266 (21%)
Query: 10 ETPI-QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLS-AGYNIYTREQSKLFDHYYYRPT 67
E P+ Q F PY DNGGT +A+AG DY +IA DTR+S GY I TR+ +K+F
Sbjct: 14 EVPMRQARFEPYVDNGGTVLAIAGSDYCVIAGDTRMSDGGYGIQTRQYTKIFQ------L 67
Query: 68 YNFLMIFTITILP------------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYT 115
N +I T + Y EH K MST ++++ +S +Y KRFFPYYT
Sbjct: 68 TNKCVIATSGMQADTLALRKRLETVLSRYQKEHGKPMSTPAISQYLSNTLYQKRFFPYYT 127
Query: 116 STIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSV 175
++ G+D +G GC+++YD +G ER + GS L+Q LLDNQVG K + +
Sbjct: 128 FNLVCGVDEDGVGCIWTYDAVGSHERVKMSSQGSGNQLVQPLLDNQVG------KFNQRI 181
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDI 235
+ G R LSS E+A+S+ KDA T+A ERDI
Sbjct: 182 VDGPR-----------ELSS---------------------EQAVSLAKDAITSAGERDI 209
Query: 236 YTGDGVHLCAITKDGIKEYNFPLRKD 261
YTGD + I G+ F L+ D
Sbjct: 210 YTGDFADIVVINSTGVHWEKFNLKLD 235
>gi|298711428|emb|CBJ32569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 251
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 133/262 (50%), Gaps = 50/262 (19%)
Query: 8 ILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
+ + P + +SPY NGGTT+A+AG DY ++A+DTR+S GY+I +R+Q+KL H
Sbjct: 32 VTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKL--HQLTSKC 89
Query: 68 Y--------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
+ ++ + MY H K M+T ++A+M++ +Y +RFFPYY+ ++
Sbjct: 90 VIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVL 149
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
GLD +GKG V+SYD IG ER + A GS + LLDN
Sbjct: 150 CGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDN------------------- 190
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
L+ F+ +++ +K + + +VK+ A ERDIYTGD
Sbjct: 191 --------------------LVEFKTRKD-EKPARSAAETVELVKELLVTAGERDIYTGD 229
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
V + I+KDG FPL+KD
Sbjct: 230 AVEITIISKDGTSTQMFPLKKD 251
>gi|154331019|ref|XP_001561949.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059271|emb|CAM36970.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 333
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 139/256 (54%), Gaps = 47/256 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR-EQSKLFD---HYYYRPT-Y 68
Q +SPY DNGGTT A+AG D+ ++A DTRL+ + ++TR ++SK+F H Y
Sbjct: 117 QQQWSPYQDNGGTTAAIAGNDFVLLAGDTRLNGNFCLHTRHDESKIFQLTPHTYMASNGM 176
Query: 69 NFLMIFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ +L +++ +++N KV ST S+A+++S ++Y +RFFPYYT +I GLD E
Sbjct: 177 QADRLQLQQLLKYRIKWYQYNNGGKVPSTKSIAQLLSTVLYHRRFFPYYTFNMIVGLDEE 236
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G YSYD +G TE + GS+ + ++ LLD + QH + Q S +
Sbjct: 237 GHGVCYSYDAVGSTEPLLYGTRGSAASFVEPLLDCLIN-RQHMTCQAPSEMSK------- 288
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
E+A+ ++K+AFT AAERDIYTGD V
Sbjct: 289 -------------------------------EEALVMLKNAFTGAAERDIYTGDSVSFIT 317
Query: 246 ITKDGIKEYNFPLRKD 261
ITKDG+++ +F LRKD
Sbjct: 318 ITKDGVQQESFALRKD 333
>gi|145350076|ref|XP_001419449.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579680|gb|ABO97742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 227
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 131/255 (51%), Gaps = 42/255 (16%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKL--FDHYYYRPTYNF 70
QH ++SPY +NGGT +AVAG +Y I ASDTR+S GY+I TR K+ + F
Sbjct: 8 QHANWSPYDNNGGTVLAVAGENYVICASDTRMSTGYSILTRNYEKVDQMSPKTLMASAGF 67
Query: 71 LM----IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ + + Y ++ K + S A+M+S +Y +RFFPYY I+AGLD EG
Sbjct: 68 MADAQTLKKTLKARCKQYEFQNKKPIGCVSFAQMLSNTLYYRRFFPYYAFNIVAGLDAEG 127
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG V++YD +G ER N+ GS AL+ +LDNQ+ + L L
Sbjct: 128 KGAVFTYDAVGSYERTNYSCQGSGQALIMPVLDNQLKTVSP----------------LVL 171
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
A+SS TP+ AI ++KD F AAERDIYTGD V L +
Sbjct: 172 P----AVSS---------------ATPLSEAAAIELIKDCFATAAERDIYTGDRVELWIM 212
Query: 247 TKDGIKEYNFPLRKD 261
DG+++ PLR D
Sbjct: 213 NADGVRKEEMPLRLD 227
>gi|384253987|gb|EIE27461.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 249
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 137/263 (52%), Gaps = 46/263 (17%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQS---KLFDH 61
TKQ LE H Y +NGGT VAVAG DY I+AS TRLS G++I +R+ S KL D
Sbjct: 27 TKQKLE-----HRHMYDNNGGTCVAVAGNDYCIVASSTRLSTGFSILSRDVSMVLKLSDK 81
Query: 62 YY-YRPTY--NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
P + + + + + Y +H + MS + A+++ +Y KRFFPYYT I
Sbjct: 82 LMILSPGFQADAKTLHKVLQQRYIRYQFDHGRPMSVAACAQLLGNTLYYKRFFPYYTFNI 141
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
AGLD EGKG VYSYD IG ER+ + GS L+Q +LDNQ+
Sbjct: 142 CAGLDEEGKGAVYSYDAIGSHERSGYAVQGSGKDLIQPVLDNQLKA-------------- 187
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
L L E N +SS +PL++A+ +V+DAF +A ERDIYTG
Sbjct: 188 --ASPLVLPPE-NWMSS------------------LPLDQAVDLVRDAFVSAGERDIYTG 226
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D V + +T +G K L+KD
Sbjct: 227 DAVEIYIMTMEGTKREVLELKKD 249
>gi|343426757|emb|CBQ70285.1| probable PRE7-20S proteasome subunit(beta6) [Sporisorium reilianum
SRZ2]
Length = 291
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 123/246 (50%), Gaps = 51/246 (20%)
Query: 13 IQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNF 70
+ H FSPY NGG+ AV G D+ +IASDTR S GYNI TR + K+F + T F
Sbjct: 28 VGHQFSPYDSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGF 87
Query: 71 LM----IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ + +MY H H + M S+A+M+S ++YGKRFFPYY I+ GLD EG
Sbjct: 88 AADAEALVSHVQQRLEMYRHAHGRSMPLHSIARMLSTILYGKRFFPYYVYNILGGLDEEG 147
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG VYS+DP+G ER RA G++ +L+Q DNQ+
Sbjct: 148 KGAVYSFDPVGSYEREFCRAAGAAQSLIQPFFDNQI------------------------ 183
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVP------LEKAISVVKDAFTAAAERDIYTGDG 240
FRNQ + + VP L + + +V D+FT+A ER I GDG
Sbjct: 184 ---------------MFRNQVSTPERTVPTPGQMTLPEVLKIVVDSFTSATERHIEVGDG 228
Query: 241 VHLCAI 246
+ + +
Sbjct: 229 LEVFVV 234
>gi|393229883|gb|EJD37498.1| proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 242
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 126/248 (50%), Gaps = 55/248 (22%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM- 72
+H F+PY++NGGT +AVAG D+A++A DTR + GY+I TR K+F R T ++
Sbjct: 3 RHGFNPYTENGGTILAVAGADFAVVAGDTRQTEGYSIQTRYAPKVF-----RLTDKAVLA 57
Query: 73 ---------IFTITILP-FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+F + + Y H H+K M S+A+MI M+Y KRFFPYY I+ G+
Sbjct: 58 VNGFAADGNMFVKKVKQRLEWYRHAHSKDMPLQSIARMIQTMLYAKRFFPYYVYNILGGI 117
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D +G G VYS+DP+G ER RA G++ +L+Q LDNQ+
Sbjct: 118 DEQGVGAVYSFDPVGSYERETCRAAGAAQSLVQPFLDNQI-------------------- 157
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
F+NQ+ +PL+ +S+V DAFT A ER I GDG+
Sbjct: 158 -------------------YFKNQQGDHPAHLPLDHVLSLVTDAFTGATERHIEVGDGLQ 198
Query: 243 LCAITKDG 250
+ I G
Sbjct: 199 MFVILARG 206
>gi|62087736|dbj|BAD92315.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 196
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 105/155 (67%), Gaps = 6/155 (3%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D +
Sbjct: 30 PLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 89
Query: 69 ---NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 90 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 149
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDN 160
GKG VYS+DP+G +R +F+AGGS+ A+LQ LLDN
Sbjct: 150 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDN 184
>gi|402222920|gb|EJU02985.1| N-terminal nucleophile aminohydrolase [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 129/254 (50%), Gaps = 57/254 (22%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---------HY 62
PIQH F+PY++NGGT +A+AG D+++IA DTR + GY+I TR K+F +
Sbjct: 14 PIQHQFNPYAENGGTILAIAGKDFSVIAGDTRQTEGYSIQTRYAPKVFKLTDRAVLAVNG 73
Query: 63 YYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ F+ I + Y H H+K M ++A+MI M+YGKRFFPYYT I+ G+
Sbjct: 74 FQADCSTFVKKVKQRI---EWYRHAHSKQMPLKAIARMIQGMLYGKRFFPYYTYNILGGI 130
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
+ +G G VYS+DP+G ER RA G++ +L+Q LDNQ+
Sbjct: 131 EEDGTGAVYSFDPVGSYEREACRAAGAASSLIQPFLDNQI-------------------- 170
Query: 183 DLALTREINALSSKLTILLGFRNQENV------DKTPVPLEKAISVVKDAFTAAAERDIY 236
F+NQ + +P++ +S+V D+FT+A ER I
Sbjct: 171 -------------------YFKNQTPAPGAAPFEPGNLPMDTVLSIVIDSFTSATERHIE 211
Query: 237 TGDGVHLCAITKDG 250
GDG+ + + G
Sbjct: 212 VGDGLEMFVVVAPG 225
>gi|320582525|gb|EFW96742.1| Beta 6 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 226
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 132/259 (50%), Gaps = 61/259 (23%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---------HY 62
PI+H F+PY+ DTR ++GY+I TR + K+FD +
Sbjct: 20 PIEHRFNPYT------------------GDTRSTSGYSINTRYEPKVFDVGNNLLLTANG 61
Query: 63 YYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ + + +F + + Y +HNK MST S A+ I ++YGKRFFPYY TI+ GL
Sbjct: 62 FAADSAQLIKVFKNQL---EWYHFDHNKPMSTQSAARFIQHLLYGKRFFPYYVHTILGGL 118
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D EGKG +YS+DP+G ER RAGG++ +L+ LDNQV QM G +
Sbjct: 119 DEEGKGAIYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----KNQMDPASDGKK-- 172
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
+ I LS LE+ I +V+DAF++A ER I GDG+
Sbjct: 173 ----RKPIRFLS---------------------LEEVIQLVRDAFSSATERHIQVGDGLE 207
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ +TKDG++ +PL++D
Sbjct: 208 ILIVTKDGVRTEYYPLKRD 226
>gi|348674011|gb|EGZ13830.1| hypothetical protein PHYSODRAFT_286698 [Phytophthora sojae]
Length = 247
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 130/255 (50%), Gaps = 52/255 (20%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY------- 68
++ PY NGGT +A+AG D+ ++A DTRLS GY++ +RE+SKL + PT
Sbjct: 36 NWEPYDFNGGTVLAIAGEDFVVVAGDTRLSTGYSVLSREESKL---HQLTPTSVLGCPGS 92
Query: 69 --NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ + + + + QMY H++ MS++++A+++ +Y +RFFPYY I+ G+D G
Sbjct: 93 HNDIIQLRGVLSIRAQMYQHDNETAMSSSAMAQLLMNTLYSRRFFPYYAFCILCGIDENG 152
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG VY+YD IG +R A GS G L+ LLDN +++H ++
Sbjct: 153 KGAVYTYDAIGSYDRVTRAAQGSGGHLMIPLLDN---LVEHDTRTDP------------- 196
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
K + L++ ++KDAF A ERDIYTGD V + I
Sbjct: 197 ------------------------KKTLSLQETKDIIKDAFITAGERDIYTGDSVEILTI 232
Query: 247 TKDGIKEYNFPLRKD 261
GI F L+KD
Sbjct: 233 KASGIAREVFALKKD 247
>gi|358054309|dbj|GAA99235.1| hypothetical protein E5Q_05929 [Mixia osmundae IAM 14324]
Length = 250
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 133/248 (53%), Gaps = 39/248 (15%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL 71
Q F+PYS+NGGT +AV+ D+A++ASDTR S GY+I +R Q ++F T F+
Sbjct: 18 QRAFNPYSENGGTILAVSSRDFAVVASDTRQSEGYSIQSRYQPRVFALTDETVMATQGFM 77
Query: 72 MIFTITILPF----QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ + Y H H K T++A+++ M+YGKRFFPYY+ I+ G+D +G
Sbjct: 78 ADSNTLVKKLRQRLEWYFHTHQKYPDLTAIARLVQTMLYGKRFFPYYSYVILGGIDRDGT 137
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G VYS+DP+G ER + R+ G++ +L+Q LDNQV + + +S+L
Sbjct: 138 GAVYSFDPVGSYERESCRSAGAAQSLVQPFLDNQVMGKNQNLPKGESIL----------- 186
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH---LC 244
+ ++ +PLE+ + +V D+FT A ER I GDG+ L
Sbjct: 187 -------------------DEEGRSNLPLERVLGLVVDSFTGATERHIEVGDGLEMYVLK 227
Query: 245 AITKDGIK 252
++++G K
Sbjct: 228 VVSREGGK 235
>gi|126644014|ref|XP_001388169.1| proteasome subunit beta type 1 [Cryptosporidium parvum Iowa II]
gi|126117246|gb|EAZ51346.1| proteasome subunit beta type 1, putative [Cryptosporidium parvum
Iowa II]
Length = 246
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 133/255 (52%), Gaps = 47/255 (18%)
Query: 13 IQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
I+H F+PY +NGG+ VAVAG D+ +IA+DTRLS Y I +R SK M
Sbjct: 33 IEHSFNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGM 92
Query: 73 IFTITIL------PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ I L ++Y EHNK S ++A+++S ++Y KRFFPYY+ +++GLD +G
Sbjct: 93 LADINALRKTLLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDEQG 152
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG VY YD +G ++ F A GS G+L+ ++LDNQ+ +S
Sbjct: 153 KGVVYGYDAVGSFDQHKFVALGSGGSLITSILDNQISGNNQTS----------------- 195
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
E++DK + I++VKD+ T+A+ERD++TGD + I
Sbjct: 196 -------------------FESIDKVGI-----INIVKDSITSASERDVHTGDSAEVIVI 231
Query: 247 TKDGIKEYNFPLRKD 261
GI + LR+D
Sbjct: 232 DSSGISVSSLRLRED 246
>gi|308807300|ref|XP_003080961.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
gi|116059422|emb|CAL55129.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
Length = 233
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 44/256 (17%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRP------ 66
QH ++SPY +NGGT +AVAG Y I A DTR+S+GYNI TR+ K+ D +
Sbjct: 14 QHANWSPYDNNGGTVLAVAGESYVICAGDTRMSSGYNILTRKFEKI-DKMSGKTLMASAG 72
Query: 67 -TYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ + + + Y ++ + + + A+M+S +Y +RFFPYY I+AGLD E
Sbjct: 73 FAADAVTLKKTLKARCKQYEFQNKREIGCVAFAQMLSNTLYYRRFFPYYAFNIVAGLDAE 132
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG V++YD +G ER N+ GS AL+ +LDNQ+ + L
Sbjct: 133 GKGAVFTYDAVGSYERTNYSCQGSGQALIMPVLDNQLKTVSP----------------LV 176
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
L +A TP+ ++AI ++KD F AAERDIYTGD V L
Sbjct: 177 LPAASSA-------------------TPLSEQEAIDLIKDCFATAAERDIYTGDSVELWI 217
Query: 246 ITKDGIKEYNFPLRKD 261
+ +G+++ LR D
Sbjct: 218 MNAEGVRKEEMALRAD 233
>gi|159118134|ref|XP_001709286.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
gi|157437402|gb|EDO81612.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
Length = 254
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 53/267 (19%)
Query: 1 MALVTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF- 59
M V+ L+ P F PY DNGGT +A+AGPD+A+IA DTRLS GYNI +R K+F
Sbjct: 35 MPEVSNAPLKDP---DFDPYIDNGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFP 91
Query: 60 --DHYYYRPT---YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYY 114
D Y + + + + Y + K ++ +++S MMY +R FP+Y
Sbjct: 92 VTDKIVYAASGMHADVQRLLKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWY 151
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
TS+I+AG+D EG+G VYSYD IG T R + + G+ A++ +LD +
Sbjct: 152 TSSIVAGIDSEGRGAVYSYDVIGSTLRTRYGSAGTGNAMICPILDEAI------------ 199
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
+ ++ +TRE A +++ AF + AERD
Sbjct: 200 ----LSKNEAEITREF----------------------------AFELIQSAFRSCAERD 227
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
IYTGD V I+ DGI+E F LRKD
Sbjct: 228 IYTGDSVVAMCISADGIQERTFELRKD 254
>gi|346467893|gb|AEO33791.1| hypothetical protein [Amblyomma maculatum]
Length = 221
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 128/253 (50%), Gaps = 51/253 (20%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPTYNFLMIFTI 76
Y +NGGT VA+AG DY ++A+DTR+S GY+I TR+ SK L D + F
Sbjct: 9 YENNGGTCVAIAGLDYCVVAADTRMSVGYSILTRDYSKICQLADKSILASSG-----FQG 63
Query: 77 TILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
I Q +Y H+HNK MS ++ +++S +Y KR PYY ++AGLD EGKG
Sbjct: 64 DIKALQKNLAAKHLIYQHQHNKQMSCPAMGQLLSNTLYYKRXXPYYAFNVLAGLDNEGKG 123
Query: 129 CVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
CV++YD +G ER + A GS L+ +LDNQ
Sbjct: 124 CVFTYDAVGSYERVGYSAQGSGSTLIMPVLDNQ--------------------------- 156
Query: 189 EINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
L S +LL ++ TP+ +A+ +VKD F +A ERDIYTGD + + I
Sbjct: 157 ----LKSPSPLLLPAKDA----VTPLSESEAVDMVKDVFASATERDIYTGDRLEIVVIDA 208
Query: 249 DGIKEYNFPLRKD 261
GI+ LRKD
Sbjct: 209 SGIRREFIELRKD 221
>gi|37778970|gb|AAP20145.1| 20S proteasome beta 6 subunit [Pagrus major]
Length = 135
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 96/166 (57%), Gaps = 39/166 (23%)
Query: 96 SLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQ 155
++A M+S ++YG+RFFPYY II GLD EGKG VYS+DP+G +R ++AGGS+ A+LQ
Sbjct: 9 AIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQ 68
Query: 156 ALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVP 215
LLDNQ+ GF+N E V P+
Sbjct: 69 PLLDNQI---------------------------------------GFKNMEGVQHVPLT 89
Query: 216 LEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
+KA+ +VKD F +AAERD+YTGD + +C ITK+GI E PLRKD
Sbjct: 90 QDKAVQLVKDVFISAAERDVYTGDALRVCVITKEGINEQTIPLRKD 135
>gi|157864139|ref|XP_001680783.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
gi|68124075|emb|CAJ02057.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
Length = 247
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 139/256 (54%), Gaps = 47/256 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR-EQSKLFD--HYYYRPTYNF 70
Q +SPY DNGGTT A+AG D+ I+A DTRL+ Y +++R +QSK+F Y Y +
Sbjct: 31 QQQWSPYHDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGM 90
Query: 71 LM--IFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ +L +++ +++N KV T ++A+++S M+Y +RFFPYYT ++ GLD E
Sbjct: 91 QADRLQLQQMLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEE 150
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G YSYD +G TE + GS+ + L+ +LD + QH + Q
Sbjct: 151 GHGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLIN-RQHMTAQAPP----------E 199
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
+T+ E+ ++++K+AFT AAERDIYTGD V
Sbjct: 200 MTK----------------------------EETLALLKNAFTGAAERDIYTGDSVSFFI 231
Query: 246 ITKDGIKEYNFPLRKD 261
ITKDG++ +F LRKD
Sbjct: 232 ITKDGVQRESFELRKD 247
>gi|311334476|emb|CBN08619.1| proteasome (prosome, macropain) subunit, beta type 1 [Microcosmus
squamiger]
Length = 181
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 103/180 (57%), Gaps = 39/180 (21%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTER 141
+MY+HEH K S ++A M+S ++Y KRFFPYY ++AG+D EGKGCV+SYDP+G ER
Sbjct: 41 KMYVHEHGKEPSVCAIAAMLSTILYYKRFFPYYVYNLLAGIDEEGKGCVFSYDPVGCYER 100
Query: 142 ANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILL 201
+RA GS+ LLQ LLDNQ+
Sbjct: 101 EAYRAEGSAAELLQPLLDNQI--------------------------------------- 121
Query: 202 GFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
G++N EN ++ + E+A+ +VKD F +AAERDI TGDGV + I G++ + FPLR+D
Sbjct: 122 GYKNMENANREALTKERALQLVKDVFISAAERDITTGDGVLIHVIDGRGVQTHEFPLRRD 181
>gi|255640620|gb|ACU20595.1| unknown [Glycine max]
Length = 207
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 126/238 (52%), Gaps = 52/238 (21%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM 72
QH ++SPY +NGG+ VA+AG DY +IA+DTR+S GYNI TR+ SK+ + +M
Sbjct: 4 QHANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKI-----SQLAEKCVM 58
Query: 73 I---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY ++ G
Sbjct: 59 ASSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGG 118
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
LD EGKGCV++YD +G ER + + GS L+ LDNQ
Sbjct: 119 LDNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ-------------------- 158
Query: 182 HDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
L S +LL Q+ V TP+ +A+ +VK F +A ERDIYTGD
Sbjct: 159 -----------LKSPSPLLL--PAQDAV--TPLSEAEAVDLVKTVFASATERDIYTGD 201
>gi|398010249|ref|XP_003858322.1| proteasome beta 6 subunit, putative [Leishmania donovani]
gi|322496529|emb|CBZ31598.1| proteasome beta 6 subunit, putative [Leishmania donovani]
Length = 247
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 139/256 (54%), Gaps = 47/256 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR-EQSKLFD--HYYYRPTYNF 70
Q +SPY DNGGTT A+AG D+ I+A DTRL+ Y +++R +QSK+F Y Y +
Sbjct: 31 QQQWSPYQDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGM 90
Query: 71 LM--IFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ +L +++ +++N +V T ++A+++S M+Y +RFFPYYT ++ GLD E
Sbjct: 91 QADRLQLQQMLKYRVKWYQYNNGGRVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEE 150
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G YSYD +G TE + GS+ + L+ +LD + QH + Q
Sbjct: 151 GHGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLIN-RQHMTAQAPP----------E 199
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
+T+ E+ ++++K+AFT AAERDIYTGD V
Sbjct: 200 MTK----------------------------EETLAMLKNAFTGAAERDIYTGDSVSFFI 231
Query: 246 ITKDGIKEYNFPLRKD 261
ITKDG++ +F LRKD
Sbjct: 232 ITKDGVQRESFELRKD 247
>gi|392592203|gb|EIW81530.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 257
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 128/254 (50%), Gaps = 59/254 (23%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P QH F+PY++NGGT +A+AG D+++IA DTR S GYNI TR K+F R T +
Sbjct: 14 PTQHQFNPYTENGGTILAIAGADFSVIAGDTRQSEGYNIQTRYAPKVF-----RLTDRAV 68
Query: 72 M----------IFTITILP-FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ +F + + Y H H K M ++A++I M+Y +RFFPYY I+
Sbjct: 69 LAVNGFAADGNMFVKKVKQRLEWYRHAHGKDMPLRAIARLIQTMLYARRFFPYYVYNILG 128
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
G++ +G G VYS+DP+G ER RA G++ +L+Q LDNQ+
Sbjct: 129 GIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQI------------------ 170
Query: 181 THDLALTREINALSSKLTILLGFRNQ----ENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
F+NQ ++ T +PL +S+V D+FT+A ER I
Sbjct: 171 ---------------------YFKNQTAPPDSAHPTHLPLPTVLSIVIDSFTSATERHIE 209
Query: 237 TGDGVHLCAITKDG 250
GDG+ + + G
Sbjct: 210 VGDGLEMYIVLARG 223
>gi|301108459|ref|XP_002903311.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
gi|262097683|gb|EEY55735.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
Length = 247
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 130/255 (50%), Gaps = 52/255 (20%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY------- 68
++ PY NGGT +A+AG D+ ++A DTRLS GY+I +R++SKL + PT
Sbjct: 36 NWEPYDFNGGTVLAIAGEDFVVVAGDTRLSTGYSILSRDESKLHE---LTPTTVLGCPGS 92
Query: 69 --NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ + + + + QMY H++ M+++++++++ +Y +RFFPYY I+ G+D G
Sbjct: 93 HNDIIQLRGVLSIRAQMYQHDNETSMTSSAMSQLLMNTLYSRRFFPYYAFCILCGIDENG 152
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG VY+YD IG +R A GS G L+ LLDN +++H ++
Sbjct: 153 KGVVYTYDAIGSYDRVTRAAQGSGGHLMIPLLDN---LVEHDTRTDP------------- 196
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
K + L++ ++KDAF A ERDIYTGD V + I
Sbjct: 197 ------------------------KKALTLQETKDIIKDAFITAGERDIYTGDSVEILTI 232
Query: 247 TKDGIKEYNFPLRKD 261
GI F L+KD
Sbjct: 233 KASGIDREMFALKKD 247
>gi|294940012|ref|XP_002782634.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239894486|gb|EER14429.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 241
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 131/264 (49%), Gaps = 59/264 (22%)
Query: 12 PIQH--HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYN 69
P++H F+PY DNGGT +AV G DY ++++D R+S GY+I TR SK+
Sbjct: 23 PMEHKNEFNPYMDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKI------TKLTE 76
Query: 70 FLMIFTITILPFQM------------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
+I T +L Q+ Y+HEH + + ++A+M+S ++Y KRFFPYYT
Sbjct: 77 RCVITTSGMLADQITLHKVLKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTFN 136
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
+IAG+D GKG VY YD IG E A GS +L+Q++LDNQ
Sbjct: 137 MIAGIDENGKGKVYGYDAIGSFESIPCGAQGSGSSLVQSILDNQ---------------- 180
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
LT+ L+S + G + + + KD +A ERDI+T
Sbjct: 181 --------LTKAHQQLASHEALTEG---------------QMVELCKDVIASATERDIHT 217
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GD +C I GIK F LRKD
Sbjct: 218 GDSNTICTIDSTGIKMQTFELRKD 241
>gi|393212888|gb|EJC98386.1| 20S proteasome subunit [Fomitiporia mediterranea MF3/22]
Length = 266
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 125/250 (50%), Gaps = 49/250 (19%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P+Q HF PY+D+GGT +A+AG D+++IA DTR + YNI TR K+F R T +
Sbjct: 19 PMQRHFEPYADSGGTILAIAGADFSVIAGDTRQTDYYNIQTRYAPKVF-----RLTDKAV 73
Query: 72 -----------MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
M + Y H H K M ++A++I M+Y +RFFPYY I+
Sbjct: 74 LAVNGFAADGNMFIKKVKQRLEWYRHAHAKDMPLRAVARLIQTMLYAQRFFPYYVYNILG 133
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
G++ +G G VYS+DP+G ER RA G++ L+Q LDNQ+ K + LG +
Sbjct: 134 GIEEDGSGAVYSFDPVGSYEREACRAAGAAQQLVQPFLDNQIYF-----KNQQPPLGTVG 188
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
H T +PLE+ +S+V D+FT+A ER I GDG
Sbjct: 189 GH----------------------------PTHLPLERVLSLVVDSFTSATERHIEVGDG 220
Query: 241 VHLCAITKDG 250
+ + + G
Sbjct: 221 LEMYVVLAKG 230
>gi|401415060|ref|XP_003872026.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488248|emb|CBZ23493.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 247
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 137/256 (53%), Gaps = 47/256 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR-EQSKLFD--HYYYRPTYNF 70
Q +SPY DNGGTT A+AG + I+A DTRL+ Y ++ R +QSK+F Y Y +
Sbjct: 31 QQQWSPYQDNGGTTAAIAGKGFVILAGDTRLNGDYCLHCRHDQSKIFQLTPYTYMASNGM 90
Query: 71 LM--IFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ +L +++ +++N KV T ++A+++S M+Y +RFFPYYT +I GLD E
Sbjct: 91 QADRVQLQQMLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMIVGLDEE 150
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G YSYD +G TE + GS+ + L+ +LD + QH + Q
Sbjct: 151 GNGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLIN-RQHMTAQAPP----------E 199
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
+T+ E+ ++++K+AFT AAERDIYTGD V
Sbjct: 200 MTK----------------------------EETLAMLKNAFTGAAERDIYTGDSVSFFI 231
Query: 246 ITKDGIKEYNFPLRKD 261
ITKDG++ +F LRKD
Sbjct: 232 ITKDGVQRESFELRKD 247
>gi|195173300|ref|XP_002027430.1| GL20944 [Drosophila persimilis]
gi|194113282|gb|EDW35325.1| GL20944 [Drosophila persimilis]
Length = 224
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 133/248 (53%), Gaps = 41/248 (16%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTI 76
Y +NGGT +A+AG D+ +I DTRLS+G I +R Q+KL T + ++
Sbjct: 10 YENNGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAATGCWCDAVSL 69
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
T L Q Y ++H+KVMS S+A+M+S++ Y +R PY S I+ G+D +G+G V+SY
Sbjct: 70 TNLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGIDQDGQGAVFSY 129
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
D IGH R + R G++ +LQ +LDNQ+G ++ K + L T E AL
Sbjct: 130 DCIGHFVRESSRVEGTAVGILQPVLDNQIG---YTKKDL-----------LDETSEQPAL 175
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
+ E+A+++ KDAF AA+ D++TGD V + ITKD IK
Sbjct: 176 TK---------------------ERALAIAKDAFITAAQSDVFTGDSVIINVITKDSIKV 214
Query: 254 YNFPLRKD 261
L KD
Sbjct: 215 EKMQLGKD 222
>gi|294955484|ref|XP_002788528.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239904069|gb|EER20324.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 241
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 131/264 (49%), Gaps = 59/264 (22%)
Query: 12 PIQH--HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYN 69
P++H F+PY DNGGT +AV G DY ++++D R+S GY+I TR SK+
Sbjct: 23 PMEHKNEFNPYMDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKI------TKLTE 76
Query: 70 FLMIFTITILPFQM------------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
+I T +L Q+ Y+HEH + + ++A+M+S ++Y KRFFPYYT
Sbjct: 77 RCVITTSGMLADQITLHKVLKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTFN 136
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
+IAG+D GKG VY YD IG E A GS +L+Q++LDNQ
Sbjct: 137 MIAGIDENGKGKVYGYDAIGSFESIPCGAQGSGSSLVQSILDNQ---------------- 180
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
LT+ L+S + G + + + KD +A ERDI+T
Sbjct: 181 --------LTKAHQQLASHEALTEG---------------QMVELCKDVIASATERDIHT 217
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GD +C I GIK F LRKD
Sbjct: 218 GDSNTICTIDSTGIKIQTFELRKD 241
>gi|146070767|ref|XP_001463096.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
gi|134067179|emb|CAM65445.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
Length = 247
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 139/256 (54%), Gaps = 47/256 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR-EQSKLFD--HYYYRPTYNF 70
Q +SPY DNGGTT A+AG D+ I+A DTRL+ Y +++R +QSK+F Y Y +
Sbjct: 31 QQQWSPYQDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGM 90
Query: 71 LM--IFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ +L +++ +++N +V T ++A+++S ++Y +RFFPYYT ++ GLD E
Sbjct: 91 QADRLQLQQMLKYRVKWYQYNNGGRVPPTKAIAQLMSTLLYHRRFFPYYTFNMVVGLDEE 150
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G YSYD +G TE + GS+ + L+ +LD + QH + Q
Sbjct: 151 GHGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLIN-RQHMTAQAPP----------E 199
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
+T+ E+ ++++K+AFT AAERDIYTGD V
Sbjct: 200 MTK----------------------------EETLAMLKNAFTGAAERDIYTGDSVSFFI 231
Query: 246 ITKDGIKEYNFPLRKD 261
ITKDG++ +F LRKD
Sbjct: 232 ITKDGVQRESFELRKD 247
>gi|340054849|emb|CCC49156.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
gi|340054851|emb|CCC49158.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
Length = 258
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 136/256 (53%), Gaps = 47/256 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR-EQSKLF---DHYYYRPT-Y 68
Q +SPY DNGGT AVAG DY I+ DTRL+ + I++R ++SKLF DH + T
Sbjct: 42 QPMWSPYKDNGGTVAAVAGKDYVILGGDTRLNGDFCIHSRNDRSKLFQLTDHVFLASTGM 101
Query: 69 NFLMIFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ +L +++ +++N +V ST ++AK+ S ++Y +RFFPYYT +I GLD +
Sbjct: 102 QADRLQLQQMLKYRIQWYQYNNGGEVPSTRAIAKLTSTILYQRRFFPYYTFNMIVGLDEK 161
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G YSYDP+G TE + GS+ + ++ L+D + QH +Q + LG
Sbjct: 162 GAGVCYSYDPVGSTEPFRYGTSGSASSFIEPLMDCLL-TRQHMVQQAPAELG-------- 212
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
+ +A+ ++K AFT AAERDI+TGD V
Sbjct: 213 ------------------------------MNEALEMLKSAFTGAAERDIFTGDSVCFHI 242
Query: 246 ITKDGIKEYNFPLRKD 261
IT +G++ F LRKD
Sbjct: 243 ITTEGVRTEFFELRKD 258
>gi|164657003|ref|XP_001729628.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
gi|159103521|gb|EDP42414.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
Length = 257
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 123/240 (51%), Gaps = 43/240 (17%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--------HYY 63
P+ H FSPY+ NGG+ +A+ G DY +IA DTR S GYNI TR + K+F
Sbjct: 2 PVGHQFSPYTSNGGSIMAIHGDDYCVIAGDTRQSEGYNIQTRYKPKVFRLTDKATLATNG 61
Query: 64 YRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
+ L+ T L +MY H H + M ++A+M+S ++Y KRFFPYY I+ G+D
Sbjct: 62 FAADAEALVARVKTRL--EMYQHTHGRSMPLHAIARMLSTILYSKRFFPYYVYNILGGID 119
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHD 183
EG+G VY YDP+G ER A G++ LLQ LDNQV
Sbjct: 120 EEGRGAVYGYDPVGSYERIVCCASGAAQGLLQPFLDNQV--------------------- 158
Query: 184 LALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHL 243
+ + +N+ + G +PL+ A+ +V D+FT+A ER I GDG+ +
Sbjct: 159 --MFKNLNSTAETKIPEPGH----------LPLQHALRIVMDSFTSATERHIEVGDGLEV 206
>gi|46397057|sp|Q9U794.1|PSB1_TRYBB RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome subunit beta-6
gi|6224687|gb|AAF05905.1|AF148124_1 20S proteasome beta 6 subunit [Trypanosoma brucei brucei]
gi|261329654|emb|CBH12636.1| 20S proteasome beta 6 subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 258
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 136/257 (52%), Gaps = 51/257 (19%)
Query: 15 HHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR-EQSKLF---DHYYYRPT-YN 69
H+SPY+DNGGT A+AG +Y ++ +DTRL+ + I+TR + SKLF D + +
Sbjct: 43 QHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQ 102
Query: 70 FLMIFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ +L +++ +++N KV ST ++AK+ S M+Y +RFFPYYT +I G+D +G
Sbjct: 103 ADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKG 162
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
G YSYDP+G TE + GS+ + ++ LL D L
Sbjct: 163 AGVCYSYDPVGSTEPFRYGTCGSASSFVEPLL------------------------DCLL 198
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPL--EKAISVVKDAFTAAAERDIYTGDGVHLC 244
TR Q V + P L E+A+ ++K+AFT AAERDI+TGD V
Sbjct: 199 TR-----------------QHMVTQAPADLTMEEALGMLKNAFTGAAERDIFTGDTVCFH 241
Query: 245 AITKDGIKEYNFPLRKD 261
IT DG+ F LRKD
Sbjct: 242 IITADGVGTEMFELRKD 258
>gi|111226971|ref|XP_001134620.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
gi|74926737|sp|Q86A21.1|PSB1_DICDI RecName: Full=Proteasome subunit beta type-1
gi|90971293|gb|EAS66954.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
Length = 236
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 131/261 (50%), Gaps = 48/261 (18%)
Query: 10 ETPIQH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLS-AGYNIYTREQSKLFD-HYYYRP 66
+ PI H F Y DNGGT +AVAG DY +IA DTR+S GY I TR+ +K+F
Sbjct: 15 QQPISHGRFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVL 74
Query: 67 TYNFLMIFTITILP-----FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+ + TI + + + EH K MST ++A+ +S +Y KRFFPYYT ++AG
Sbjct: 75 ATSGMQADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAG 134
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
+D +G+G +++YD +G ER + + GS L+ LLDNQV
Sbjct: 135 VDEQGEGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQVAKF---------------- 178
Query: 182 HDLALTREINALSSKLTILLGFRNQENVD-KTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
NQ+ V+ V E+ +S VKD+ T+A ERDIYTGD
Sbjct: 179 -----------------------NQQIVEGNKDVSCEQVVSFVKDSITSAGERDIYTGDF 215
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ + K+G+ F L+ D
Sbjct: 216 ADIVVVDKNGVHWEKFELKLD 236
>gi|72391616|ref|XP_846102.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175642|gb|AAX69774.1| proteasome beta 6 subunit [Trypanosoma brucei]
gi|70802638|gb|AAZ12543.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 258
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 136/257 (52%), Gaps = 51/257 (19%)
Query: 15 HHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR-EQSKLF---DHYYYRPT-YN 69
H+SPY+DNGGT A+AG +Y ++ +DTRL+ + I+TR + SKLF D + +
Sbjct: 43 QHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQ 102
Query: 70 FLMIFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ +L +++ +++N KV ST ++AK+ S M+Y +RFFPYYT +I G+D +G
Sbjct: 103 ADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKG 162
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
G YSYDP+G TE + GS+ + ++ LL D L
Sbjct: 163 AGVCYSYDPVGSTEPFRYGTCGSASSFVEPLL------------------------DCLL 198
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPL--EKAISVVKDAFTAAAERDIYTGDGVHLC 244
TR Q V + P L E+A+ ++K+AFT AAERDI+TGD V
Sbjct: 199 TR-----------------QHMVTQAPADLTMEEALGMLKNAFTGAAERDIFTGDTVCFH 241
Query: 245 AITKDGIKEYNFPLRKD 261
+T DG+ F LRKD
Sbjct: 242 IVTADGVGTEMFELRKD 258
>gi|388581296|gb|EIM21605.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
Length = 255
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 121/240 (50%), Gaps = 53/240 (22%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY-------N 69
F+PY+ NGGT +A+AG D+ ++A DTR S G++I +R ++K++ + T +
Sbjct: 3 FNPYTQNGGTVLAIAGKDFCVVAGDTRQSEGFSIQSRYETKVW-RLNEKATIAANGFAAD 61
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
+ + Y + HNK M S+A+M+ M+YGKRFFP+Y+ II G+D EG G
Sbjct: 62 CKQLVKRVKWRLETYKYAHNKEMPLKSIARMVQTMLYGKRFFPFYSYVIIGGIDDEGTGA 121
Query: 130 VYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
VY +DP+G ER RA G++ +LLQ LDNQ+
Sbjct: 122 VYGFDPVGSYERETCRAAGAAQSLLQPFLDNQI--------------------------- 154
Query: 190 INALSSKLTILLGFRNQENVDKT--PV----PLEKAISVVKDAFTAAAERDIYTGDGVHL 243
FRNQE D P+ PLE +++V D+FT A ER I GD + +
Sbjct: 155 ------------YFRNQEPADPANPPIPGNLPLETVLAIVTDSFTGATERHIEVGDALEM 202
>gi|407420511|gb|EKF38599.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi marinkellei]
Length = 246
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 136/258 (52%), Gaps = 51/258 (19%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTRE-QSKLF---DHYYYRPT-Y 68
+ +SPY+DNGGT A+AG +Y I+ DTRL+ + I+TR+ ++KLF +H + T
Sbjct: 30 EQQWSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHTRDDRTKLFQLTEHTFLASTGM 89
Query: 69 NFLMIFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ +L +++ +++N K+ ST ++AK+ S M+Y +RFFPYYT ++ GLD +
Sbjct: 90 QADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEK 149
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G YSYDP+G TE + GS+ + ++ L+ D
Sbjct: 150 GAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLM------------------------DCL 185
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLE--KAISVVKDAFTAAAERDIYTGDGVHL 243
LTR Q V + P L + + ++K+AFT AAERDI+TGD V
Sbjct: 186 LTR-----------------QHMVQQAPAELSMTETLEMLKNAFTGAAERDIFTGDAVCF 228
Query: 244 CAITKDGIKEYNFPLRKD 261
IT DGI+ F LRKD
Sbjct: 229 HIITADGIRSELFELRKD 246
>gi|449548524|gb|EMD39490.1| hypothetical protein CERSUDRAFT_80861 [Ceriporiopsis subvermispora
B]
Length = 252
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 121/257 (47%), Gaps = 59/257 (22%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY 68
P Q F+PYSDNGGT +A+AG D+ +IA DTR S GY+I TR K+F R T
Sbjct: 6 FSNPQQRQFNPYSDNGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVF-----RLTD 60
Query: 69 NFL-----------MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
+ M + Y H H K M ++A++I M+Y +RFFPYY
Sbjct: 61 RAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYAQRFFPYYVYN 120
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
I+ G++ +G G VYS+DP+G ER RA G++ +L+Q LDNQ+
Sbjct: 121 ILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQI--------------- 165
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTP----VPLEKAISVVKDAFTAAAER 233
F+NQ P +PL +++V D+FT+A ER
Sbjct: 166 ------------------------YFKNQAAAPNQPHPAHLPLSDVLAIVIDSFTSATER 201
Query: 234 DIYTGDGVHLCAITKDG 250
I GDG+ + + G
Sbjct: 202 HIEVGDGLEIYVVLAKG 218
>gi|294942317|ref|XP_002783482.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239895942|gb|EER15278.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 242
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 131/264 (49%), Gaps = 59/264 (22%)
Query: 12 PIQH--HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYN 69
P++H F+PY DNGGT +AV G DY ++++D R+S GY+I TR SK+
Sbjct: 24 PMEHKNEFNPYVDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITK------LTE 77
Query: 70 FLMIFTITILPFQM------------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
+I T +L Q+ Y+HEH + + ++A+M+S ++Y KRFFPYYT
Sbjct: 78 RCVITTSGMLADQITLHKVLKNRVARYVHEHRREPTIGAVAQMLSNILYYKRFFPYYTFN 137
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
+IAG+D G+G VY YD IG E A GS +L+Q++LDNQ
Sbjct: 138 MIAGIDENGQGKVYGYDAIGSFESIPCGAQGSGSSLVQSILDNQ---------------- 181
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
LT+ L+S + G + + + KD +A ERDI+T
Sbjct: 182 --------LTKAHQQLASHEALTEG---------------QMVELCKDVIASATERDIHT 218
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GD +C I GIK F LRKD
Sbjct: 219 GDSNTVCTIDTTGIKIQTFELRKD 242
>gi|353238864|emb|CCA70796.1| probable PRE7-20S proteasome subunit(beta6) [Piriformospora indica
DSM 11827]
Length = 250
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 125/245 (51%), Gaps = 51/245 (20%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM- 72
+ F+PY++NGGT +A+AG D+ +IA DTR S GYNI TR K+F R T ++
Sbjct: 5 ERRFNPYTENGGTILAIAGQDFTVIAGDTRQSEGYNIQTRYAPKVF-----RLTDKAVLA 59
Query: 73 ---------IFTITILP-FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+F + + Y H HNK M ++A++I M+Y KRFFPYY I+ G+
Sbjct: 60 VNGFAADGNMFVQKVQQRLEWYQHAHNKEMPLRAIARLIQTMLYAKRFFPYYVYNILGGI 119
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
+ +G G VYS+DP+G ER RA G++ +L+Q LDNQ+ + Q+ G H
Sbjct: 120 EDDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQI----YFKNQLPPSGGAHPKH 175
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
+PL++ +S+V D+FT A ER I GDG+
Sbjct: 176 -------------------------------LPLKEVLSLVIDSFTGATERHIEVGDGLE 204
Query: 243 LCAIT 247
+ +T
Sbjct: 205 IYIVT 209
>gi|342319050|gb|EGU11002.1| Proteasome subunit beta type [Rhodotorula glutinis ATCC 204091]
Length = 289
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 127/254 (50%), Gaps = 49/254 (19%)
Query: 12 PIQHHFSPYS-------DNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---- 60
PIQH F+PY+ DNGG+ +A++ +A+IA DTR S+GYNI TR ++F
Sbjct: 3 PIQHQFNPYAVRFCPLFDNGGSILAISSSKFAVIAGDTRQSSGYNIETRTAKRVFQLTPE 62
Query: 61 -----HYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYT 115
+ N + + + Y H HN+V S S+A+++ M+YGKRFFPYY+
Sbjct: 63 AAIAVQGFMGDAMNLVKRLKQRL---EWYHHTHNEVPSLKSIARLVQTMLYGKRFFPYYS 119
Query: 116 STIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSV 175
I+AG+D +G G VYS+DP+G ER + RA GS+ +L+Q LDN V
Sbjct: 120 YVILAGIDRDGTGAVYSFDPVGSYERESCRAYGSAQSLVQPFLDNMV------------- 166
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDI 235
+ N + + D L + S++ DAFT AAER I
Sbjct: 167 ------------YKKNQVPDPSLPPPVPGQRPEFD-----LAEVQSLLTDAFTGAAERHI 209
Query: 236 YTGDGVHLCAITKD 249
GDG+ + + KD
Sbjct: 210 EVGDGLDVLVVEKD 223
>gi|71654519|ref|XP_815877.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70880966|gb|EAN94026.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 135/258 (52%), Gaps = 51/258 (19%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTRE-QSKLF---DHYYYRPT-Y 68
+ +SPY+DNGGT A+AG +Y I+ DTRL+ + I+ R+ ++KLF +H + T
Sbjct: 30 EQQWSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGM 89
Query: 69 NFLMIFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ +L +++ +++N K+ ST ++AK+ S M+Y +RFFPYYT ++ GLD +
Sbjct: 90 QADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEK 149
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G YSYDP+G TE + GS+ + ++ L+ D
Sbjct: 150 GAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLM------------------------DCL 185
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLE--KAISVVKDAFTAAAERDIYTGDGVHL 243
LTR Q V + P L + + ++K+AFT AAERDI+TGD V
Sbjct: 186 LTR-----------------QHMVQQAPAELSMTETLEMLKNAFTGAAERDIFTGDAVCF 228
Query: 244 CAITKDGIKEYNFPLRKD 261
IT DGI+ F LRKD
Sbjct: 229 HIITADGIRSELFELRKD 246
>gi|71655250|ref|XP_816231.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70881343|gb|EAN94380.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 135/258 (52%), Gaps = 51/258 (19%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTRE-QSKLF---DHYYYRPT-Y 68
+ +SPY+DNGGT A+AG +Y I+ DTRL+ + I+ R+ ++KLF +H + T
Sbjct: 30 EQQWSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGM 89
Query: 69 NFLMIFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ +L +++ +++N K+ ST ++AK+ S M+Y +RFFPYYT ++ GLD +
Sbjct: 90 QADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEK 149
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G YSYDP+G TE + GS+ + ++ L+ D
Sbjct: 150 GAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLM------------------------DCL 185
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLE--KAISVVKDAFTAAAERDIYTGDGVHL 243
LTR Q V + P L + + ++K+AFT AAERDI+TGD V
Sbjct: 186 LTR-----------------QHMVQQAPAELSMTETLEMLKNAFTGAAERDIFTGDAVCF 228
Query: 244 CAITKDGIKEYNFPLRKD 261
IT DGI+ F LRKD
Sbjct: 229 HIITADGIRSELFELRKD 246
>gi|407853394|gb|EKG06411.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi]
Length = 246
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 135/258 (52%), Gaps = 51/258 (19%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTRE-QSKLF---DHYYYRPT-Y 68
+ +SPY+DNGGT A+AG +Y I+ DTRL+ + I+TR+ ++KLF +H + T
Sbjct: 30 EQQWSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHTRDDRTKLFQLTEHTFLASTGM 89
Query: 69 NFLMIFTITILPFQMYLHEHN---KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ +L +++ +++N K+ ST ++AK+ S M+Y +RFFPYYT ++ GLD +
Sbjct: 90 QADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEK 149
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G YSYDP+G TE + GS+ + ++ L+ D
Sbjct: 150 GAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLM------------------------DCL 185
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLE--KAISVVKDAFTAAAERDIYTGDGVHL 243
LTR Q V + P L + + ++K+AFT AAERDI+TGD V
Sbjct: 186 LTR-----------------QHMVQQAPAELSMTETLEMLKNAFTGAAERDIFTGDAVCF 228
Query: 244 CAITKDGIKEYNFPLRKD 261
IT DGI+ F LR D
Sbjct: 229 HIITADGIRSELFELRND 246
>gi|409040369|gb|EKM49857.1| hypothetical protein PHACADRAFT_265596 [Phanerochaete carnosa
HHB-10118-sp]
Length = 252
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 125/249 (50%), Gaps = 49/249 (19%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR---EQSKLFDHYYYRPT- 67
P + F+PY++NGGT +A+AG D++++A DTR S GY+I TR + KL D
Sbjct: 9 PQERQFNPYTENGGTILAIAGADFSVVAGDTRQSEGYSIQTRYAPKVHKLTDRAVLAVNG 68
Query: 68 --YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ M + Y H H K M ++A++I M+YG+RFFPYY I+ G++ +
Sbjct: 69 FAADGNMFVKKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYGQRFFPYYVYNILGGIEED 128
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G +YS+DP+G ER RA G++ AL+Q LDNQ+
Sbjct: 129 GTGAIYSFDPVGSYERETCRAAGAAMALVQPFLDNQI----------------------- 165
Query: 186 LTREINALSSKLTILLGFRNQENVDKTP----VPLEKAISVVKDAFTAAAERDIYTGDGV 241
F+NQ+ +P +PL+ +S+V D+FT+A ER I GDG+
Sbjct: 166 ----------------YFKNQQAPADSPHPVHLPLQDVLSIVIDSFTSATERHIEVGDGL 209
Query: 242 HLCAITKDG 250
+ I G
Sbjct: 210 EIYVILAKG 218
>gi|414886159|tpg|DAA62173.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 234
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 117/233 (50%), Gaps = 59/233 (25%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL 79
Y +NGGT VA+AG DY ++A+DTRLS GY+I TR+ SK+ D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICD---------LADKCVLASS 59
Query: 80 PFQ---------------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
FQ +Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD
Sbjct: 60 GFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS 119
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKGCV++YD +G ER + A G+ L+ +LDNQ
Sbjct: 120 EGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQ----------------------- 156
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
L S +LL R+ TP+ +AI +VKD F +A ERDIYT
Sbjct: 157 --------LKSPSPLLLPARDA----VTPLSESEAIDLVKDVFASATERDIYT 197
>gi|403412828|emb|CCL99528.1| predicted protein [Fibroporia radiculosa]
Length = 252
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 122/252 (48%), Gaps = 51/252 (20%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYN 69
E P Q F+PY++NGGT +A+AG D+ +IA DTR S GY+I TR K+F R T
Sbjct: 7 EQPQQRQFNPYTENGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVF-----RLTER 61
Query: 70 FL-----------MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
+ M + Y H H K M ++A++I M+Y +RFFPYY I
Sbjct: 62 AVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKEMPLRAIARLIQTMLYAQRFFPYYVYNI 121
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ G++ +G G VYS+DP+G ER RA G++ +L+Q LDNQ+ + Q +
Sbjct: 122 LGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQI----YFKNQTPAAGSS 177
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
TH +PL +S+V D+FT+A ER I G
Sbjct: 178 HPTH-------------------------------LPLNDVLSIVIDSFTSATERHIEVG 206
Query: 239 DGVHLCAITKDG 250
DG+ + + G
Sbjct: 207 DGLEIYVVLAKG 218
>gi|209881526|ref|XP_002142201.1| proteasome subunit beta type 1 [Cryptosporidium muris RN66]
gi|209557807|gb|EEA07852.1| proteasome subunit beta type 1, putative [Cryptosporidium muris
RN66]
Length = 245
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 127/252 (50%), Gaps = 46/252 (18%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT 75
F+PY+DNGG+ +A+AG D+A+I SDTRLS GY I +R +++F+ M
Sbjct: 34 EFNPYTDNGGSCIALAGSDFAVIVSDTRLSQGYRIASRSVTRVFEITAKCVLSCSGMFAD 93
Query: 76 ITILP------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
IT L ++Y EH K S ++A+++S ++Y KRFFPYY IAGLD G G
Sbjct: 94 ITALQKLIRARVKIYEFEHKKSPSIGAVAQLLSTVLYSKRFFPYYCYCAIAGLDEYGNGV 153
Query: 130 VYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
Y YD +G + + A G+ L+ ++LDNQ+ G + + LT +
Sbjct: 154 AYGYDAVGSFQSGKYFANGTGSHLISSILDNQIS-------------GNNQLYPKILTNK 200
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
++ I ++KDA T+A+ERD+YTGD + I
Sbjct: 201 VD---------------------------MIDLLKDAITSASERDVYTGDSAQVVVIDAS 233
Query: 250 GIKEYNFPLRKD 261
GI +FPLR+D
Sbjct: 234 GISISSFPLRQD 245
>gi|198463833|ref|XP_002135596.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
gi|198151431|gb|EDY74223.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
Length = 216
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 130/248 (52%), Gaps = 49/248 (19%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTI 76
Y +NGGT +A+AG D+ +I DTRLS+G I +R Q+KL T ++
Sbjct: 10 YENNGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAATGCGCDAVSL 69
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
T L Q Y ++H+KVMS S+A+M+S++ Y +R PY S I+ G+D +G+G V+SY
Sbjct: 70 TNLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGIDQDGQGAVFSY 129
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
D IGH R + R G++ +LQ +LDNQ+G +S+Q ALT+
Sbjct: 130 DCIGHFVRESSRVEGTAVGILQPVLDNQIG---ETSEQP------------ALTK----- 169
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
E+A+++ KDAF AA+ D++TGD V + ITKD IK
Sbjct: 170 -----------------------ERALAIAKDAFITAAQSDMFTGDSVIINVITKDSIKV 206
Query: 254 YNFPLRKD 261
L KD
Sbjct: 207 EKMQLGKD 214
>gi|342182103|emb|CCC91582.1| proteasome beta 6 subunit [Trypanosoma congolense IL3000]
Length = 258
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 137/255 (53%), Gaps = 51/255 (20%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR-EQSKLF---DHYYYRPT---YN 69
+SPY+DNGGT A+AG D+AI+ +DTRL+ + I+TR + SKLF D + + +
Sbjct: 45 WSPYTDNGGTIAAIAGRDFAILGADTRLNGDFCIHTRMDTSKLFQLTDRVFLASSGMQAD 104
Query: 70 FLMIFTITILPFQMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
L + + Q Y + + K ST ++AK++S ++Y +RFFPYYT +I GLD +G G
Sbjct: 105 RLQLQRMLQYRIQWYRYNNGGKTPSTKAIAKLVSTVLYQRRFFPYYTFNMIVGLDEQGAG 164
Query: 129 CVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
YSYD +G TE + + GS+ + ++ L+ D LTR
Sbjct: 165 VCYSYDAVGSTEPSRYGTCGSASSFVEPLM------------------------DCLLTR 200
Query: 189 E--INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
+ + ++ +L++ E+ + ++KDAFT AAERDI+TGD V I
Sbjct: 201 QHMVTSVPPELSV-----------------EEVLGMMKDAFTGAAERDIFTGDSVCFHVI 243
Query: 247 TKDGIKEYNFPLRKD 261
T +GI+ F LRKD
Sbjct: 244 TAEGIRTEMFELRKD 258
>gi|56758256|gb|AAW27268.1| SJCHGC09410 protein [Schistosoma japonicum]
gi|226489270|emb|CAX75779.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489272|emb|CAX75780.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489274|emb|CAX75781.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 135/256 (52%), Gaps = 56/256 (21%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKLFDHYYYRPTYNFLM--- 72
F+PY+ NGGT + ++G D+A+IASDTRL G + I +R +LF N L
Sbjct: 2 FNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFK----LGRGNVLGCAG 57
Query: 73 ----IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ T+T L + Y ++H K +ST +LA ++S+ +Y +RFFP+Y S I+ GLD +
Sbjct: 58 FHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD 117
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
+G +YSYDP+G E +RA GSS A+LQ LD+ VG +SK S L
Sbjct: 118 -RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVG--NKTSKYHVSRL--------- 165
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
N+E A+ + D F +AAERD GDGV +
Sbjct: 166 -------------------NKET----------AVKLTHDIFISAAERDTQCGDGVVIYT 196
Query: 246 ITKDGIKEYNFPLRKD 261
+TKDG+ E ++PLR+D
Sbjct: 197 VTKDGLSETSYPLRRD 212
>gi|226471340|emb|CAX70751.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 135/256 (52%), Gaps = 56/256 (21%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKLFDHYYYRPTYNFLM--- 72
F+PY+ NGGT + ++G D+A+IASDTRL G + I +R +LF N L
Sbjct: 2 FNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFK----LGRGNVLGYAG 57
Query: 73 ----IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ T+T L + Y ++H K +ST +LA ++S+ +Y +RFFP+Y S I+ GLD +
Sbjct: 58 FHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD 117
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
+G +YSYDP+G E +RA GSS A+LQ LD+ VG +SK S L
Sbjct: 118 -RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVG--NKTSKYHVSRL--------- 165
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
N+E A+ + D F +AAERD GDGV +
Sbjct: 166 -------------------NKET----------AVKLTHDIFISAAERDTQCGDGVVIYT 196
Query: 246 ITKDGIKEYNFPLRKD 261
+TKDG+ E ++PLR+D
Sbjct: 197 VTKDGLSETSYPLRRD 212
>gi|395325433|gb|EJF57855.1| proteasome subunit [Dichomitus squalens LYAD-421 SS1]
Length = 252
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 123/250 (49%), Gaps = 51/250 (20%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P Q F+PY+DNGGT +A+AG D+ +IA DTR S GY+I TR K+F R T +
Sbjct: 9 PQQRQFNPYTDNGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVF-----RLTDRAV 63
Query: 72 -----------MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
M + Y H H K M ++A++I M+Y +RFFPYY I+
Sbjct: 64 LAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLHAIARLIQTMLYAQRFFPYYVYNILG 123
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
G++ +G G VYS+DP+G ER RA G++ +L+Q LDNQ+ K K+ G +
Sbjct: 124 GIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYF-----KNQKAAAG--Q 176
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
+H L PL +++V D+FT+A ER I GDG
Sbjct: 177 SHPAHL----------------------------PLSDVLAIVIDSFTSATERHIEVGDG 208
Query: 241 VHLCAITKDG 250
+ + + G
Sbjct: 209 LEIYVVVAKG 218
>gi|299743502|ref|XP_001835816.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
gi|298405683|gb|EAU85881.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
Length = 253
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 119/247 (48%), Gaps = 49/247 (19%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPT 67
+ P Q F+PY++NGGT +AVAG D+ +IA DTR S GYNI TR K+F
Sbjct: 7 QQPHQRAFNPYTENGGTILAVAGADFTVIAGDTRQSEGYNIQTRYAPKVFKLTDKAVLAV 66
Query: 68 YNFL----MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
F M + Y H H K M S+A++I M+Y +RFFPYY I+ G++
Sbjct: 67 NGFAADGNMFVKKVKQRLEWYRHAHAKDMPIRSIARLIQTMLYARRFFPYYVYNILGGIE 126
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHD 183
+G G VYS+DP+G ER RA G++ +L+Q LDNQ+
Sbjct: 127 EDGTGAVYSFDPVGSYERETCRAAGAAQSLVQPFLDNQI--------------------- 165
Query: 184 LALTREINALSSKLTILLGFRNQENVDKTP----VPLEKAISVVKDAFTAAAERDIYTGD 239
F+NQ T +PL+ +++V D+FT A ER I GD
Sbjct: 166 ------------------YFKNQTPAPGTSFPQHLPLQTVLALVIDSFTGATERHIEVGD 207
Query: 240 GVHLCAI 246
G+ + +
Sbjct: 208 GLEMYVV 214
>gi|336369489|gb|EGN97830.1| hypothetical protein SERLA73DRAFT_182590 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382272|gb|EGO23422.1| hypothetical protein SERLADRAFT_469320 [Serpula lacrymans var.
lacrymans S7.9]
Length = 253
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 127/253 (50%), Gaps = 51/253 (20%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY 68
L P Q F+PYS+NGGT +A+AG D+++IA DTR S GY+I TR K+F R T
Sbjct: 7 LAHPQQRSFNPYSENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVF-----RLTD 61
Query: 69 NFLM----------IFTITILP-FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
++ +F + + Y H H+K M ++A++I M+Y +RFFPYY
Sbjct: 62 RAVLAVNGFAADGNMFVKKVKQRLEWYRHAHSKDMPLRAIARLIQTMLYARRFFPYYVYN 121
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
I+ G++ +G G VYS+DP+G ER RA G++ +L+Q LDNQ+ K LG
Sbjct: 122 ILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYF-----KNQTPALG 176
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
+H L PL +S+V D+FT+A ER I
Sbjct: 177 --TSHPAHL----------------------------PLPTVLSIVIDSFTSATERHIEV 206
Query: 238 GDGVHLCAITKDG 250
GDG+ + + G
Sbjct: 207 GDGLEMYVVLAKG 219
>gi|426195798|gb|EKV45727.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 256
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 123/247 (49%), Gaps = 59/247 (23%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P QH F+PY++NGGT +A+AG D+++IA DTR S GY+I TR K+F R T +
Sbjct: 12 PQQHQFNPYTENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVF-----RLTDKAV 66
Query: 72 M----------IFTITILP-FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ +F + + Y H H K M ++A++I M+Y +RFFPYY I+
Sbjct: 67 LAVNGFAADGNMFVKKVRQRLEWYRHAHAKDMPIRAIARLIQTMLYSRRFFPYYVYNILG 126
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
G++ +G G VYS+DP+G ER RA G++ +L+Q LDNQ+
Sbjct: 127 GIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQI------------------ 168
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVP----LEKAISVVKDAFTAAAERDIY 236
F+NQ T P L +S+V D+FT+A ER I
Sbjct: 169 ---------------------YFKNQTPAPGTSFPGHLSLSTVLSLVIDSFTSATERHIE 207
Query: 237 TGDGVHL 243
GDG+ +
Sbjct: 208 VGDGLEM 214
>gi|409078890|gb|EKM79252.1| hypothetical protein AGABI1DRAFT_113835 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 256
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 123/247 (49%), Gaps = 59/247 (23%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P QH F+PY++NGGT +A+AG D+++IA DTR S GY+I TR K+F R T +
Sbjct: 12 PQQHQFNPYTENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVF-----RLTDKAV 66
Query: 72 M----------IFTITILP-FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ +F + + Y H H K M ++A++I M+Y +RFFPYY I+
Sbjct: 67 LAVNGFAADGNMFVKKVRQRLEWYRHAHAKDMPIRAIARLIQTMLYSRRFFPYYVYNILG 126
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
G++ +G G VYS+DP+G ER RA G++ +L+Q LDNQ+
Sbjct: 127 GIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQI------------------ 168
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVP----LEKAISVVKDAFTAAAERDIY 236
F+NQ T P L +S+V D+FT+A ER I
Sbjct: 169 ---------------------YFKNQTPAPGTSFPGHLSLSTVLSLVIDSFTSATERHIE 207
Query: 237 TGDGVHL 243
GDG+ +
Sbjct: 208 VGDGLEM 214
>gi|392559294|gb|EIW52479.1| proteasome subunit [Trametes versicolor FP-101664 SS1]
Length = 252
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 122/250 (48%), Gaps = 51/250 (20%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P Q F+PY+DNGGT +A+AG D+ +IA DTR S GY+I TR K+F R T +
Sbjct: 9 PQQRSFNPYTDNGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVF-----RLTDRAV 63
Query: 72 -----------MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
M + Y H H K M ++A++I M+Y +RFFPYY I+
Sbjct: 64 LAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYAQRFFPYYVYNILG 123
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
G++ +G G VYS+DP+G ER RA G++ +L+Q LDNQ+ + Q +V
Sbjct: 124 GIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQI----YFKNQTAAVGQSHP 179
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
TH +PL +++V D+FT+A ER I GDG
Sbjct: 180 TH-------------------------------LPLPDVLAIVIDSFTSATERHIEVGDG 208
Query: 241 VHLCAITKDG 250
+ + + G
Sbjct: 209 LEIYVVVAKG 218
>gi|345560620|gb|EGX43745.1| hypothetical protein AOL_s00215g481 [Arthrobotrys oligospora ATCC
24927]
Length = 266
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 121/249 (48%), Gaps = 49/249 (19%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
P QHH+SPY++NGG + +AG DY IIA DTR S GY+I TR K++D + L
Sbjct: 22 PRQHHWSPYTENGGCILGIAGKDYVIIAGDTRSSEGYSINTRTARKVYD------IGSGL 75
Query: 72 MIFTITI------------LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
++ + + Y H+K ++ + A M+S ++Y KRFFPYY ++
Sbjct: 76 ILGVVGMSADGEELVRKVARKIDDYKRNHDKHITVAAAAVMLSRILYQKRFFPYYCQPLL 135
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
GLD EG G +YSYD +G ER RA G++ +L+ LDNQ+
Sbjct: 136 GGLDEEGVGAIYSYDYVGSFEREQSRAYGAAASLITPFLDNQINF--------------- 180
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
K + G +E K + E+ +VKDAFT+A ER I GD
Sbjct: 181 ----------------KNQFVPGSNGEEPRPKVDLSKEQVEKIVKDAFTSAVERHIEVGD 224
Query: 240 GVHLCAITK 248
G+ L I K
Sbjct: 225 GLQLVTIVK 233
>gi|170089877|ref|XP_001876161.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164649421|gb|EDR13663.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 249
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 126/254 (49%), Gaps = 59/254 (23%)
Query: 8 ILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
+ + P QH F+PY++NGGT +A+AG D+++IA DTR S GY+I TR K+F R T
Sbjct: 1 MTQRPQQHSFNPYTENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVF-----RLT 55
Query: 68 YNFLM----------IFTITILP-FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
++ +F + + Y H H+K M ++A++I M+Y +RFFPYY
Sbjct: 56 DKAVLAVNGFAADGNMFVKKVRQRLEWYRHAHSKDMPIRAIARLIQTMLYARRFFPYYVY 115
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
I+ G++ +G G VYS+DP+G ER RA G++ +L+Q LDNQ+
Sbjct: 116 NILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLMQPFLDNQI-------------- 161
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTP----VPLEKAISVVKDAFTAAAE 232
F+NQ T +PL +S+V D+FT A E
Sbjct: 162 -------------------------YFKNQTPAPGTSFPQHLPLNTVLSLVIDSFTGATE 196
Query: 233 RDIYTGDGVHLCAI 246
R I GD + + +
Sbjct: 197 RHIEVGDSLEMYVV 210
>gi|123447011|ref|XP_001312251.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121894091|gb|EAX99321.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 224
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 127/256 (49%), Gaps = 55/256 (21%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT 75
+SPY +GGT + + G DY +I +DTRLS Y+I +R ++++F + N ++ T
Sbjct: 12 QWSPYEMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIF-----KMNSNCMISAT 66
Query: 76 -----ITILPFQM------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
I +M Y ++H MS S+A+ +S +Y KRFFPYY + ++ G++
Sbjct: 67 GFDGDIDAFITRMRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGINS 126
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
EGKG +Y YDP+G E ++ + GS +L LLD+ G I H+++ +
Sbjct: 127 EGKGKLYGYDPVGTIEDLHYDSNGSGSSLAAPLLDSAFGTIHHNTRPFPA---------- 176
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
V L+ A ++V+DA + ERDIYTGD + LC
Sbjct: 177 -----------------------------VSLQDAKNIVRDAICSVTERDIYTGDALQLC 207
Query: 245 AITKDGIKEYNFPLRK 260
TKDG + FPL +
Sbjct: 208 VFTKDGFAQEEFPLPR 223
>gi|392572662|gb|EIW65807.1| hypothetical protein TREMEDRAFT_46043 [Tremella mesenterica DSM
1558]
Length = 270
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 128/255 (50%), Gaps = 57/255 (22%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---------H 61
P++H F+PYS+NGGT +A+AG D+++IA DTR S GY+I TR K+F +
Sbjct: 17 APVEHRFNPYSENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYARKVFQLTDNAVLATN 76
Query: 62 YYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+ NF+ ++ + Y H H+K M ++A++I M+YG+RFFPYY I+ G
Sbjct: 77 GFAADGKNFVRRLKQSL---EWYQHNHHKQMGLKAIARLIQTMLYGRRFFPYYVYNILGG 133
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
++ +G G VYS+DP+G ER RA G++ AL+Q LDNQ+
Sbjct: 134 IEEDGSGAVYSFDPVGSYEREACRAAGAAQALVQPFLDNQI------------------- 174
Query: 182 HDLALTREINALSSKLTILLGFRNQ------ENVDKTPVPLEKAISVVKDAFTAAAERDI 235
F+NQ E +PL + +V D+FT+A ER I
Sbjct: 175 --------------------YFKNQQPEPGAEPFVPGRLPLSTVLGLVVDSFTSATERHI 214
Query: 236 YTGDGVHLCAITKDG 250
GDG+ + + G
Sbjct: 215 EVGDGIEIFIVMAKG 229
>gi|403171610|ref|XP_003330811.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169259|gb|EFP86392.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 255
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 128/257 (49%), Gaps = 46/257 (17%)
Query: 22 DNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI-FTITILP 80
DNGGT +A++ ++A+IA DTR S GY+I TR Y P L I +
Sbjct: 28 DNGGTILAISSKEFAVIAGDTRQSEGYSIQTR----------YAPKVTQLTEECCIAVNG 77
Query: 81 F---------------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
F Q Y H H S S+A+++ M+YG+RFFPYY I+AG+D +
Sbjct: 78 FAADGKELVKQLKQRLQWYQHTHASQPSVQSIARLVQTMLYGRRFFPYYAYVILAGIDRD 137
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G VYS+DP+G ER + RA G++ +L+Q LDNQVG K M
Sbjct: 138 GTGAVYSFDPVGSYERESCRAAGAAQSLVQPFLDNQVG-----GKNM------------- 179
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
TR+ + + + ++ +PLEK ++V DAFT AAER I GDG+ +
Sbjct: 180 -TRDPSGPAPPPEPVYAQGQSYTPPRSQLPLEKVQALVTDAFTGAAERHIEVGDGLEIFI 238
Query: 246 ITK-DGIKEYNFPLRKD 261
I G++ L++D
Sbjct: 239 IEAGKGVRVVRKELKRD 255
>gi|167538768|ref|XP_001751043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770452|gb|EDQ84148.1| predicted protein [Monosiga brevicollis MX1]
Length = 120
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 92/160 (57%), Gaps = 42/160 (26%)
Query: 104 MMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVG 163
M+Y KRFFPYYT+ I+AGLD EGKGCVYSYDP+G ER FRA G++ +LLQ LLDNQ+
Sbjct: 1 MLYRKRFFPYYTNNILAGLDAEGKGCVYSYDPVGSYEREVFRAAGTASSLLQPLLDNQI- 59
Query: 164 IIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPL--EKAIS 221
G +N N D P+PL E+A+
Sbjct: 60 --------------------------------------GGKNLANQD-GPLPLDKERAVR 80
Query: 222 VVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
+VKD F AAAERDIYTGD VH+ ITKDG+ PLR+D
Sbjct: 81 LVKDIFVAAAERDIYTGDAVHIAIITKDGVTHEEMPLRRD 120
>gi|190408868|gb|EDV12133.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
Length = 242
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 133/259 (51%), Gaps = 39/259 (15%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--------HY 62
T I+H F+PY DNGGT + +AG D+A++A DTR Y+I +R + K+FD
Sbjct: 15 TAIEHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSAN 74
Query: 63 YYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ + L+ + + + + K++ + + G+ FFPYY TIIAGL
Sbjct: 75 GFAADGDALVKRFKNSVKWYHFGPQRQKIIYKLCSKEYSTSSGTGRGFFPYYVHTIIAGL 134
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D +GKG VYS+DP+G ER RAGG++ +L+ LDNQV Q + G
Sbjct: 135 DEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNF----KNQYEPGTNG---- 186
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
+ + + LS +E+ I +V+D+FT+A ER I GDG+
Sbjct: 187 --KVKKPLKYLS---------------------VEEVIKLVRDSFTSATERHIQVGDGLE 223
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ +TKDG+++ + L++D
Sbjct: 224 ILIVTKDGVRKEFYELKRD 242
>gi|226489268|emb|CAX75778.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 134/256 (52%), Gaps = 56/256 (21%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKLFDHYYYRPTYNFLM--- 72
F+ Y+ NGGT + ++G D+A+IASDTRL G + I +R +LF N L
Sbjct: 2 FNLYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFK----LGRGNVLGCAG 57
Query: 73 ----IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ T+T L + Y ++H K +ST +LA ++S+ +Y +RFFP+Y S I+ GLD +
Sbjct: 58 FHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD 117
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
+G +YSYDP+G E +RA GSS A+LQ LD+ VG +SK S L
Sbjct: 118 -RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVG--NKTSKYHVSRL--------- 165
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
N+E A+ + D F +AAERD GDGV +
Sbjct: 166 -------------------NKET----------AVKLTHDIFISAAERDTQCGDGVVIYT 196
Query: 246 ITKDGIKEYNFPLRKD 261
+TKDG+ E ++PLR+D
Sbjct: 197 VTKDGLSETSYPLRRD 212
>gi|14594933|emb|CAC43327.1| putative beta6 proteasome subunit [Nicotiana tabacum]
Length = 192
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 118/227 (51%), Gaps = 41/227 (18%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPT---YNFL 71
SPY +NGGT VAVAG DY +IA+DTR+S+GYNI TR+ SK L D + +
Sbjct: 1 SPYDNNGGTCVAVAGADYCVIAADTRMSSGYNILTRDYSKIIKLADKCVLASSGFQADVK 60
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+ + +Y H+HNK MS ++ +++S +Y KRFFPYY+ ++ GLD EGKGCV+
Sbjct: 61 ALQKVLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVF 120
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
+YD +G R + + GS L+ LD Q
Sbjct: 121 TYDAVGSYGRVGYSSQGSGSTLIMPFLDYQ------------------------------ 150
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
L S +LL ++ TP+ +AI +VK F +A ERDIYTG
Sbjct: 151 -LKSPSPLLLPAKDAV----TPLSESEAIDLVKTCFVSATERDIYTG 192
>gi|449020004|dbj|BAM83406.1| 20S core proteasome subunit beta 6 [Cyanidioschyzon merolae strain
10D]
Length = 244
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 131/255 (51%), Gaps = 42/255 (16%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPT--- 67
Q +SPY DNGGT +A+AG DYAI+A+DTRLS G++I +R +K L D
Sbjct: 25 QRTWSPYVDNGGTVLALAGRDYAIVAADTRLSVGFSIPSRNFTKIVQLTDQAVLASAGMG 84
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-G 126
+ + I ++Y ++H K MS ++A+++S +Y +RFFP Y ++ G+D G
Sbjct: 85 ADRQYLHKILRSRLEIYRYQHQKEMSLGAIAQLLSNTLYSRRFFPIYAFNVLGGIDANTG 144
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
+G V+ YD IG E+ GS L+Q +LD Q L G + +D+
Sbjct: 145 EGFVFGYDAIGSFEKVKVVCSGSGQTLVQPVLDQQ--------------LAGRQKYDVPD 190
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
+ + +LS L +AI + +D F +AAERDI TGD + L A+
Sbjct: 191 DQRMASLS---------------------LAEAIELTRDVFNSAAERDILTGDALELYAV 229
Query: 247 TKDGIKEYNFPLRKD 261
T G++ F LR+D
Sbjct: 230 TASGVRCERFELRRD 244
>gi|452821727|gb|EME28754.1| 20S proteasome subunit beta 6 [Galdieria sulphuraria]
Length = 232
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 125/252 (49%), Gaps = 45/252 (17%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK--LFDHYYYRPTYNFLM-- 72
F PY +NGGT VA+ G DY I+++ TRL G+ I TR + + ++ T
Sbjct: 19 FMPYQNNGGTVVAIGGEDYCIVSATTRLGLGFAIPTRNVCRYSILNNRVVLATAGMFADT 78
Query: 73 --IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
+ + ++Y + +K S A+++S +Y +RFFPYYT ++ GLD +G+G V
Sbjct: 79 ATLHKVIKARVKIYEEQQDKPFGLHSAAQLLSNTLYYRRFFPYYTFNVLGGLDEDGQGFV 138
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
Y +D IG E+ G+ AL+Q +LDNQV KQ
Sbjct: 139 YGFDAIGSGEKVKVVCNGTGQALIQPILDNQV-----EKKQ------------------- 174
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD- 249
EN T + L++A+ ++KD FT+A ERDIYTGD + +C ITK+
Sbjct: 175 --------------QYENKQITKLSLQEAVDLIKDVFTSAGERDIYTGDAIDICIITKEK 220
Query: 250 GIKEYNFPLRKD 261
G+ F L++D
Sbjct: 221 GVLVETFQLKQD 232
>gi|389745045|gb|EIM86227.1| proteasome subunit [Stereum hirsutum FP-91666 SS1]
Length = 258
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 117/245 (47%), Gaps = 41/245 (16%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTYN 69
P Q F+PY+ NGGT +A+AG D+ +IASDTR + G++I TR K F
Sbjct: 15 PQQRAFNPYTQNGGTILAIAGADFTVIASDTRQTEGFSIQTRYAPKAFQLTDRAVLAVNG 74
Query: 70 FL----MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
F M + Y H H K M ++A++I M+YG+RFFPYY I+ G++ +
Sbjct: 75 FAADGNMFVKQVKQRLEWYRHAHAKDMPLRAIARLIQTMLYGRRFFPYYVYNILGGIEED 134
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G G VYS+DP+G ER RA G++ +L+Q LDNQ+ + Q S
Sbjct: 135 GTGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAQGLS----------- 183
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
T +PL + +V D+FT+A ER I GDG+ +
Sbjct: 184 ------------------------HPTHLPLPDVLDIVIDSFTSATERHIEVGDGLEMFI 219
Query: 246 ITKDG 250
+ G
Sbjct: 220 VLAKG 224
>gi|324507472|gb|ADY43167.1| Proteasome subunit beta type-1 [Ascaris suum]
Length = 253
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 135/254 (53%), Gaps = 48/254 (18%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSA-GYNIYTREQSKL--FDHYYYRPTYNF--- 70
++PYS GG+T A+AG ++AIIASDTR+S NI TR+ K+ ++ F
Sbjct: 39 WNPYSFEGGSTAALAGDNFAIIASDTRMSQFEINILTRDAEKIHVLNNSIILACSGFYGD 98
Query: 71 -LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
L + + Y ++ M+ A++++ +Y +RFFPYYT +I+AG+D +GKG
Sbjct: 99 VLQLKRLLEARLHKYRFDYRGDMTVDLCAELLARNLYYRRFFPYYTGSILAGIDEDGKGA 158
Query: 130 VYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
V+SYDPIG ER + A GS+ ++ LD QVG + L G
Sbjct: 159 VFSYDPIGCIERLQYTASGSAEPMIMPFLDCQVGHV---------TLTG----------- 198
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
+V+K P+ +E+A S++KDAF +AER+I TGD +HL I +
Sbjct: 199 ------------------DVEKPPLTIERATSLMKDAFRVSAEREICTGDKIHL-VIAER 239
Query: 250 G--IKEYNFPLRKD 261
G I++ + PLR+D
Sbjct: 240 GKPIRQMHLPLRED 253
>gi|67526071|ref|XP_661097.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
gi|40739864|gb|EAA59054.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
gi|259481995|tpe|CBF76042.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 215
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 66/263 (25%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+ F PY+ NGG T+ V+GPD+AI+A DTR +AGYNI TR + K+F R
Sbjct: 4 ETRFYPYTSNGGATLGVSGPDFAILAGDTRSTAGYNINTRYEPKVFTIQDARDRS----- 58
Query: 74 FTITILPFQ---------------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
I+++ F MY ++H K + + A+ +S M+Y KRFFPY T+
Sbjct: 59 IVISVIGFAADGRALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTM 118
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AG+D +G+G +Y YDP G E+ + A G + +L+ LD+Q +Q
Sbjct: 119 VAGIDADGQGAIYYYDPAGCIEKRSHCAAGEASSLMLPFLDSQAPRLQ------------ 166
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
P+ L+ A +V+DA+T A ER I G
Sbjct: 167 ----------------------------------PLSLQTAQQLVRDAYTGATERHIEVG 192
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D + + +T++G+ E L+KD
Sbjct: 193 DHLQMLVVTREGVSEQLVDLKKD 215
>gi|390602798|gb|EIN12190.1| proteasome subunit [Punctularia strigosozonata HHB-11173 SS5]
Length = 276
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 121/279 (43%), Gaps = 68/279 (24%)
Query: 1 MALVTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD 60
M + +E P Q F+PYSDNGGT +A+AG D+ +IA DTR S GYNI TR K+F
Sbjct: 3 MTMPNTNDMEHPQQRQFNPYSDNGGTILAIAGADFTVIAGDTRQSEGYNIQTRYAPKVFK 62
Query: 61 --HYYYRPTYNFL----MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYY 114
F M + Y H H K M ++A++I M+Y +RFFPYY
Sbjct: 63 LTDRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLHAIARLIQTMLYARRFFPYY 122
Query: 115 TSTIIAGLDPE-------------------GKGCVYSYDPIGHTERANFRAGGSSGALLQ 155
I+ G++ + G G VYS+DP+G ER RA G++ L+Q
Sbjct: 123 VYNILGGIEEDGTSAHSARPAFSSHFPTRTGSGAVYSFDPVGSYERETCRAAGAAQNLVQ 182
Query: 156 ALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTP-- 213
LDNQ+ F+NQ+ T
Sbjct: 183 PFLDNQI---------------------------------------YFKNQQPAPGTSHP 203
Query: 214 --VPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
+PL I +V D+FT A ER I GDG+ + + G
Sbjct: 204 KHLPLPDVIKLVIDSFTGATERHIEVGDGLEMYIVLAKG 242
>gi|299116145|emb|CBN76052.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 249
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 41/252 (16%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---------LFDHYYYRPT 67
F PY++NGGT VAVAGPDY IIA+D+RLS GY I +R ++ L + T
Sbjct: 28 FEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADT 87
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
L + I ++M E + M T ++++M+S +Y +R FP+YT I+ GLD EG
Sbjct: 88 QGLLRLLEYLIRDYEM---EQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEEGI 144
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G VY YD +G ER G +L+Q +LD
Sbjct: 145 GAVYGYDAVGSFERVRVACAGGGLSLMQPVLDR--------------------------- 177
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
++A + R V LE+A+++V+ AF A ERDI GD V + +T
Sbjct: 178 --LDAAEAVTGAGGCGRAGREQPVVAVGLEEALALVRRAFVAGGERDISLGDEVEIVVVT 235
Query: 248 KDGIKEYNFPLR 259
+ G + L+
Sbjct: 236 RQGHRRERLQLK 247
>gi|195439248|ref|XP_002067543.1| GK16137 [Drosophila willistoni]
gi|194163628|gb|EDW78529.1| GK16137 [Drosophila willistoni]
Length = 229
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 119/255 (46%), Gaps = 52/255 (20%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRL-SAGYNIYTREQSKLFDHYYYRPT----- 67
+H F PY NGG+ VA+AG D+ IA DTR+ + I +R QSKLF
Sbjct: 20 KHSFDPYVCNGGSIVAIAGEDFVTIAGDTRMVNEDDAIVSRSQSKLFQLTPMTAIGSVGC 79
Query: 68 -YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ L + + MY H K +ST +LA+M+SI MY RFFPY+ S I+AG+D G
Sbjct: 80 FADTLAVVNVIKQNIHMYQLTHLKRISTDALAQMLSISMYSHRFFPYFVSNIVAGIDRNG 139
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG V+SYDPIGH ER + A G+ L+ +D + K +K
Sbjct: 140 KGAVFSYDPIGHHERKAYDAAGTGFELMIPAMDYFI-------KNLKE------------ 180
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
P+ +E A + + A +D+YTGD + I
Sbjct: 181 --------------------------PLTIEIAAEITRKVMIVADNKDVYTGDSAIMYII 214
Query: 247 TKDGIKEYNFPLRKD 261
TK+G++ PLRKD
Sbjct: 215 TKNGVEAKKMPLRKD 229
>gi|302688009|ref|XP_003033684.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
gi|300107379|gb|EFI98781.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
Length = 274
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 129/277 (46%), Gaps = 80/277 (28%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY 68
L P QH F+PY+DNGGT +A+AG D+++IA DTR S GYNI TR K+ +R T
Sbjct: 7 LGHPTQHSFNPYTDNGGTVLAIAGSDFSVIAGDTRQSEGYNIQTRYAPKV-----HRLTN 61
Query: 69 NFLMIFT---------ITILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
++ T + L + Y H H K M ++A++I M+YG+RFFP+Y
Sbjct: 62 KAVLAVTGFAADGNTFVKKLKQRLEWYHHAHAKNMPLQAVARLIQTMLYGRRFFPFYVYI 121
Query: 118 IIAGLDPE--------------------GKGCVYSYDPIGHTERANFRAGGSSGALLQAL 157
I+ G++ + G G VYS+DP+G ER RA G++ +LLQ
Sbjct: 122 ILGGIEEDGTRHRSSRSHTHRPTFFLFPGSGSVYSFDPVGSYERETCRAAGAAQSLLQPF 181
Query: 158 LDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTP---- 213
LDNQ+ F+NQ T
Sbjct: 182 LDNQI---------------------------------------YFKNQIPQPGTTHPAH 202
Query: 214 VPLEKAISVVKDAFTAAAERDIYTGDGVHL-CAITKD 249
+PL +S+V D+FT+A ER I GDG+ + + KD
Sbjct: 203 LPLPHVLSLVIDSFTSATERHIEVGDGLEVYIVVAKD 239
>gi|70954344|ref|XP_746223.1| proteasome subunit beta type 1 [Plasmodium chabaudi chabaudi]
gi|56526764|emb|CAH76320.1| proteasome subunit beta type 1, putative [Plasmodium chabaudi
chabaudi]
Length = 252
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 129/273 (47%), Gaps = 61/273 (22%)
Query: 10 ETPIQH-----HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQ---SKLFDH 61
E PI+H ++PY DNGGT + + G DY I+A DTRLS Y+IYTR SK+ D
Sbjct: 20 EAPIEHARPSKRWNPYVDNGGTVIGLTGKDYVILAGDTRLSLSYSIYTRNCPKISKITDK 79
Query: 62 YYY---------RPTYNFLMIFTITIL----PFQMYLHEHNKVMSTTSLAKMISIMMYGK 108
+ ++ L + L Q++ EH+ S +AK++ + +Y +
Sbjct: 80 CIIGSSGMQSDIKTLHSLLQVCYSKKLRKHKKIQLFYLEHSHYPSVHVIAKLLCVTLYSR 139
Query: 109 RFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHS 168
RFFPYYT I+AG+D GKG +YSYD IG ++ GS +L+ +LDN+V
Sbjct: 140 RFFPYYTFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNRV------ 193
Query: 169 SKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFT 228
+ K+ L I+ D L +IN VKDA T
Sbjct: 194 --EQKNQL--IKNMDFNLGDDIN------------------------------FVKDAMT 219
Query: 229 AAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
+A ERDIYTGD + I GI L+KD
Sbjct: 220 SATERDIYTGDQAEIYIIDNLGINTTLLDLKKD 252
>gi|323445273|gb|EGB01969.1| hypothetical protein AURANDRAFT_9896 [Aureococcus anophagefferens]
Length = 150
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 96/152 (63%), Gaps = 10/152 (6%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY-------- 68
F PY NGGTT+A++G D+A++A+DTR+S GY+I TR+ SKL H T
Sbjct: 1 FEPYDFNGGTTLAISGADFAVVAADTRMSTGYSIMTRKMSKL--HQLGPNTVLAAAGCQT 58
Query: 69 NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
+ + + + +MY H+ K M+TTS+A+M+ +Y KRFFPYY ++AG+D EGKG
Sbjct: 59 DVVCLVDVLKTRQKMYKHQTGKNMTTTSIAQMLGNTLYYKRFFPYYAFNVLAGVDKEGKG 118
Query: 129 CVYSYDPIGHTERANFRAGGSSGALLQALLDN 160
CVYSYD IG ER F A GS + + LLDN
Sbjct: 119 CVYSYDAIGSFERVPFSASGSGQSYIIPLLDN 150
>gi|308502323|ref|XP_003113346.1| CRE-PBS-6 protein [Caenorhabditis remanei]
gi|308265647|gb|EFP09600.1| CRE-PBS-6 protein [Caenorhabditis remanei]
Length = 258
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 131/256 (51%), Gaps = 46/256 (17%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKL--FDHYYYRPTYNF 70
+ ++PYS GG+T A++G ++AI+ASDTR++ NI TR+ K+ + T F
Sbjct: 41 RQRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIILTTSGF 100
Query: 71 ----LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
L + + Y ++ MS A+++S +Y +RFFPYYT I+AG+D G
Sbjct: 101 YGDVLQLKKVLQSRLHKYRFDYRADMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDENG 160
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG V+SYDPIG ER + A G++ ++ LD Q+G
Sbjct: 161 KGAVFSYDPIGCIERLTYSASGAAEPMIIPFLDCQIG----------------------- 197
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC-A 245
+T+ G+ ++ + LE+AIS++KD+F AAER+I TGD +HL A
Sbjct: 198 ---------HVTLAEGY------ERPQLTLERAISLMKDSFRGAAEREISTGDKIHLVIA 242
Query: 246 ITKDGIKEYNFPLRKD 261
T + + PLR+D
Sbjct: 243 ETGKPVVQKFLPLRED 258
>gi|402585903|gb|EJW79842.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 258
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 129/255 (50%), Gaps = 48/255 (18%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSA-GYNIYTREQSKL--FDHYYYRPTYNF-- 70
++PYS GGTT A+AG ++AI+ASDTR+S NI TR+ K+ + F
Sbjct: 43 EWNPYSFEGGTTAAIAGDNFAIMASDTRMSQFEINILTRDAEKIHVLNDSIVLSCAGFYG 102
Query: 71 --LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
L + + Y ++ M+ A+++S +Y +RFFPYYT I+AG+D GKG
Sbjct: 103 DILQLKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKG 162
Query: 129 CVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
V+SYDPIG E + A GS+ ++ D Q+G++ S
Sbjct: 163 AVFSYDPIGCIEHIAYTASGSAEPMIMPFFDCQIGLVTMSG------------------- 203
Query: 189 EINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
+V+K + +E+A S++KDAF AAER+I TGD +HL I +
Sbjct: 204 -------------------DVEKPHLTVERATSLIKDAFRVAAEREISTGDKIHL-VIAE 243
Query: 249 DG--IKEYNFPLRKD 261
G I++ + PLR+D
Sbjct: 244 AGKPIRKMHLPLRED 258
>gi|312066298|ref|XP_003136204.1| proteasome subunit beta type 1 [Loa loa]
gi|307768639|gb|EFO27873.1| proteasome subunit beta type 1 [Loa loa]
Length = 258
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 134/270 (49%), Gaps = 54/270 (20%)
Query: 1 MALVTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSA-GYNIYTREQSKL- 58
M V KQ E ++PYS GGTT A+AG ++AI+ASDTR+S N+ TR+ K+
Sbjct: 34 MRPVVKQASE------WNPYSFEGGTTAAIAGDNFAIMASDTRMSQFEINVLTRDAEKIH 87
Query: 59 -FDHYYYRPTYNF----LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPY 113
+ F L + + Y ++ M+ A+++S +Y +RFFPY
Sbjct: 88 VLNDSIVLSCAGFYGDVLQLKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPY 147
Query: 114 YTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMK 173
YT I+AG+D GKG V+SYDPIG E + A GS+ ++ D Q+G++ S
Sbjct: 148 YTGAILAGIDENGKGAVFSYDPIGCIEHIGYTASGSAEPMIMPFFDCQIGLVTVSG---- 203
Query: 174 SVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAER 233
+V+K + +E+A S++KDAF AAER
Sbjct: 204 ----------------------------------DVEKPHLTIERATSLIKDAFRVAAER 229
Query: 234 DIYTGDGVHLCAITKDG--IKEYNFPLRKD 261
+I TGD +HL I + G I++ + PLR+D
Sbjct: 230 EISTGDKIHL-VIVEAGKPIRKMHLPLRED 258
>gi|170578154|ref|XP_001894290.1| proteasome subunit beta type 1 [Brugia malayi]
gi|158599186|gb|EDP36871.1| proteasome subunit beta type 1, putative [Brugia malayi]
Length = 258
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 129/255 (50%), Gaps = 48/255 (18%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSA-GYNIYTREQSKL--FDHYYYRPTYNF-- 70
++PYS GGTT A+AG ++AI+ASDTR+S N+ TR+ K+ + F
Sbjct: 43 EWNPYSFEGGTTAAIAGDNFAIMASDTRMSQFEINVLTRDAEKIHVLNDSIVLSCAGFYG 102
Query: 71 --LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
L + + Y ++ M+ A+++S +Y +RFFPYYT I+AG+D GKG
Sbjct: 103 DILQLKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKG 162
Query: 129 CVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
V+SYDPIG E + A GS+ ++ D Q+G++ S
Sbjct: 163 AVFSYDPIGCIEHIAYTASGSAEPMIMPFFDCQIGLVTMSG------------------- 203
Query: 189 EINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
+V+K + +E+A S++KDAF AAER+I TGD +HL I +
Sbjct: 204 -------------------DVEKPLLTIERATSLIKDAFRVAAEREISTGDKIHL-VIAE 243
Query: 249 DG--IKEYNFPLRKD 261
G I++ + PLR+D
Sbjct: 244 AGKPIRKMHLPLRED 258
>gi|313231365|emb|CBY08480.1| unnamed protein product [Oikopleura dioica]
Length = 242
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 123/255 (48%), Gaps = 47/255 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTRE---QSKLFDHYYYRPTY-- 68
+ H+SPYS +GGT +A+AG D+ ++ASDTRL IYTRE S + DH
Sbjct: 28 KRHWSPYSWHGGTCLAIAGDDFVLMASDTRLGEHGGIYTRELNRNSPVTDHCAIGQCGFQ 87
Query: 69 -NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ ++ ++Y H+H + + ++A M+S M+Y KRFFPYY I+AGLD +GK
Sbjct: 88 GDARVLLQNVKAKIRIYEHQHMEQPTAPAIAAMLSTMLYYKRFFPYYVYNIVAGLDGDGK 147
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G V+SYDP+G ++ GS+ L+Q LDNQ+
Sbjct: 148 GSVFSYDPVGSYDQVPMVCYGSAQNLIQPFLDNQI------------------------- 182
Query: 188 REINALSSKLTILLGFRNQENVDKTP-VPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
R D P + E+ + DAF +A+ER+ TGDG+ + I
Sbjct: 183 ---------------RRPHIKEDAAPKMTRERVRQLAIDAFISASERETNTGDGITVTLI 227
Query: 247 TKDGIKEYNFPLRKD 261
K G PLR+D
Sbjct: 228 DKTGTTVETIPLRRD 242
>gi|145483595|ref|XP_001427820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145552816|ref|XP_001462083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394903|emb|CAK60422.1| unnamed protein product [Paramecium tetraurelia]
gi|124429921|emb|CAK94710.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 48/253 (18%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKL---FDHYYYRPT---YN 69
+SPY DN GT +AV P I+A DTRLS GYNI +R+ +KL D +
Sbjct: 28 QWSPYHDNSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQYAD 87
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
F+ + Q+Y ++ ST ++A ++S +Y +RFFPYYT ++AGLD G
Sbjct: 88 FIALRKFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDENNHGV 147
Query: 130 VYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
VY YD IG ++ + GS L+ A+LDNQ+
Sbjct: 148 VYGYDAIGSYDQMTYGVQGSGQELVVAVLDNQL--------------------------- 180
Query: 190 INALSSKLTILLGFRNQENVDKT-PVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
+ ++KT P E+ + ++ D F+ AAERDI+TGD V + IT
Sbjct: 181 --------------KGYNKINKTIPQTREEILDIILDCFSCAAERDIHTGDNVEILIITA 226
Query: 249 DGIKEYNFPLRKD 261
G + PLRKD
Sbjct: 227 AGTERIVKPLRKD 239
>gi|341897234|gb|EGT53169.1| CBN-PBS-6 protein [Caenorhabditis brenneri]
Length = 258
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 130/257 (50%), Gaps = 48/257 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKL--FDHYYYRPTYNF 70
+ ++PYS GG+T A+AG ++AI+ASDTR++ NI TR+ K+ + T F
Sbjct: 41 RQRWNPYSMEGGSTCAIAGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIVLTTSGF 100
Query: 71 ----LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ + + Y ++ MS A++++ +Y +RFFPYYT I+AG+D G
Sbjct: 101 YGDVIQLKKVLQSRLHKYRFDYRADMSVDLCAELLARNLYYRRFFPYYTGAILAGIDENG 160
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG V+SYDPIG ER + A G++ ++ LD Q+G + S
Sbjct: 161 KGAVFSYDPIGCIERIAYSASGAAEPMIIPFLDCQIGHVTLS------------------ 202
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
E ++ + LE+AIS++KD+F AAER+I TGD +HL I
Sbjct: 203 --------------------EGYERPELTLERAISLMKDSFRGAAEREISTGDKIHL-VI 241
Query: 247 TKDG--IKEYNFPLRKD 261
+ G + + PLR+D
Sbjct: 242 AEAGKPVVQKFLPLRED 258
>gi|414886157|tpg|DAA62171.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 228
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 67/244 (27%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL 79
Y +NGGT VA+AG DY ++A+DTRLS GY+I TR+ SK+ D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICD---------LADKCVLASS 59
Query: 80 PFQ---------------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
FQ +Y H+HNK MS ++A+++S +Y KRFFPYY ++
Sbjct: 60 GFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVL----- 114
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
GKGCV++YD +G ER + A G+ L+ +LDNQ
Sbjct: 115 -GKGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQ----------------------- 150
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
L S +LL R+ TP+ +AI +VKD F +A ERDIYT + C
Sbjct: 151 --------LKSPSPLLLPARDA----VTPLSESEAIDLVKDVFASATERDIYTVSCI--C 196
Query: 245 AITK 248
++ K
Sbjct: 197 SLPK 200
>gi|238578402|ref|XP_002388706.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
gi|215450229|gb|EEB89636.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
Length = 165
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 97/164 (59%), Gaps = 16/164 (9%)
Query: 9 LETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY 68
L P Q F+PYS+NGGT +A+ G ++++IA DTR S GY+I TR K+F R T
Sbjct: 7 LGQPQQRQFNPYSENGGTILAIGGANFSVIAGDTRQSEGYSIQTRYAPKVF-----RLTD 61
Query: 69 NFLM----------IFTITILP-FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
++ +F + + Y H H K M ++A++I M+Y +RFFPYY
Sbjct: 62 KAVLAVNGFAADGNMFVKKVRQRLEWYRHAHAKDMPLRAIARLIQTMLYARRFFPYYVYN 121
Query: 118 IIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQ 161
I+ G++ +G G VYS+DP+G ER + RA G++ +L+Q LDNQ
Sbjct: 122 ILGGIEEDGSGAVYSFDPVGSYERESCRAAGAAQSLVQPFLDNQ 165
>gi|268570354|ref|XP_002648488.1| C. briggsae CBR-PBS-6 protein [Caenorhabditis briggsae]
Length = 258
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 48/257 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKL--FDHYYYRPTYNF 70
+ ++PYS GG+T A++G ++AI+ASDTR++ NI TR+ K+ + T F
Sbjct: 41 RQRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIILTTSGF 100
Query: 71 ----LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ + + Y ++ MS A+++S +Y +RFFPYYT I+AG+D G
Sbjct: 101 YGDVIQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHG 160
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG V+SYDPIG ER + A G++ ++ LD Q+G
Sbjct: 161 KGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQIG----------------------- 197
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
+T+ G+ ++ + LE+AIS++KD+F AAER+I TGD +HL I
Sbjct: 198 ---------HVTLAEGY------ERPQLTLERAISLMKDSFRGAAEREISTGDKIHL-VI 241
Query: 247 TKDG--IKEYNFPLRKD 261
+ G + + PLR+D
Sbjct: 242 AEAGKPVVQKFLPLRED 258
>gi|68065946|ref|XP_674957.1| proteasome subunit beta type 1 [Plasmodium berghei strain ANKA]
gi|56493858|emb|CAI00630.1| proteasome subunit beta type 1, putative [Plasmodium berghei]
Length = 267
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 133/288 (46%), Gaps = 76/288 (26%)
Query: 10 ETPIQH-----HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR---EQSKLFDH 61
E I+H ++PY DNGGT + + G +Y I+A DTRLS Y+IYTR + SK+ D
Sbjct: 20 EAAIEHARPSKRWNPYIDNGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDK 79
Query: 62 YYYRPT----------------------YNF----LMIFTITIL--PFQMYLHEHNKVMS 93
+ YN+ L+IF IL Q++ EH+ S
Sbjct: 80 CIIGSSGMQSDIKTLHSLLQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPS 139
Query: 94 TTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGAL 153
+AK++ + +Y +RFFPYYT I+AG+D GKG +YSYD IG ++ GS +L
Sbjct: 140 IHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSGSSL 199
Query: 154 LQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTP 213
+ +LDN+V + K+ L I+ D L +IN
Sbjct: 200 ILPILDNRV--------EQKNQL--IKNMDFNLRDDIN---------------------- 227
Query: 214 VPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
VKDA T+A ERDIYTGD + I GI L++D
Sbjct: 228 --------FVKDAMTSATERDIYTGDKAEIYIIDNLGINTTLLDLKQD 267
>gi|221056989|ref|XP_002259632.1| Proteasome subunit beta type [Plasmodium knowlesi strain H]
gi|193809704|emb|CAQ40406.1| Proteasome subunit beta type, putative [Plasmodium knowlesi strain
H]
Length = 241
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 132/263 (50%), Gaps = 51/263 (19%)
Query: 10 ETPIQH-----HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR---EQSKLFDH 61
E P++H ++PY DNGGT + V G DY I+A+DTRLS Y+IYTR + SKL D
Sbjct: 19 EGPVEHGRGFKRWNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRYCPKISKLTDK 78
Query: 62 YYYRPT---YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
+ + + ++ ++++ EH +A+++ +++Y +RFFPYYT +
Sbjct: 79 CIIGSSGMQSDIKTLHSLLKKKIELFVLEHGHYPDIHVIARLLCVILYSRRFFPYYTFNL 138
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AG+ + KG +Y+YD IG A GS AL+ +LDN+ ++ ++ +K+
Sbjct: 139 LAGVSNDNKGVLYNYDAIGSYCEATHSCVGSGAALIFPILDNR---MEQKNQLIKN---- 191
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
L F ++++D VKDA T+A ERDIYTG
Sbjct: 192 ----------------------LNFNLRDDID-----------FVKDAITSATERDIYTG 218
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D + I + G+K L++D
Sbjct: 219 DQTEIYIIDQMGVKTTTLDLKQD 241
>gi|145520811|ref|XP_001446261.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413738|emb|CAK78864.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 120/253 (47%), Gaps = 48/253 (18%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKL---FDHYYYRPT---YN 69
+SPY DN GT +A+ P ++A DTRLS GYNI TR+ +KL D +
Sbjct: 28 QWSPYHDNSGTVLAIGIPGAVLVAGDTRLSNGYNILTRDATKLSQLTDKCVLATAGQYAD 87
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
F+ + Q+Y ++ ST ++A ++S +Y +RFFPYYT ++AGLD G
Sbjct: 88 FIALRKFLQQRLQLYEFQNEVQASTQTVAHLLSRELYSRRFFPYYTFNLLAGLDENNHGV 147
Query: 130 VYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
VY YD IG ++ + GS L+ A+LDNQ+
Sbjct: 148 VYGYDAIGSYDQMTYGVQGSGQELVVAVLDNQL--------------------------- 180
Query: 190 INALSSKLTILLGFRNQENVDKT-PVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
+ ++KT P ++ + ++ D F+ AAERDI+TGD V + IT
Sbjct: 181 --------------KGYNKINKTFPQTQQEILDLILDCFSCAAERDIHTGDNVEILIITP 226
Query: 249 DGIKEYNFPLRKD 261
G + PLRKD
Sbjct: 227 TGTERIVKPLRKD 239
>gi|339246829|ref|XP_003375048.1| proteasome subunit beta type-1 [Trichinella spiralis]
gi|316971688|gb|EFV55434.1| proteasome subunit beta type-1 [Trichinella spiralis]
Length = 297
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 46/259 (17%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKLF----DHYYY 64
E + F+PY++NGGT +AG D+ I++ DTRLSA + +R K++ Y
Sbjct: 78 ENALSDRFNPYTENGGTCAGIAGKDFVILSGDTRLSASSMVVMSRTAPKVYRLTPKVYMT 137
Query: 65 RPTYNFLMIFTITILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ MI + +L Q YL N+ M + A+++S +Y +RFFPYY II G+
Sbjct: 138 GTGFQGDMIQLVKVLRTRIQQYLFTFNEYMDIHAAAQLLSRTLYFRRFFPYYVGAIIGGI 197
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTH 182
D +G+G +YSYDP+G E + A G L++ DNQ+
Sbjct: 198 DRDGRGVLYSYDPVGTIEELPYSAQGEGSYLIEPFFDNQI-------------------- 237
Query: 183 DLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVH 242
G++ Q K P+ E+A ++ DAF + ER+ TGD V
Sbjct: 238 -------------------GWKTQPEQTKQPLSKERAQQLMHDAFISTIEREKSTGDAVQ 278
Query: 243 LCAITKDGIKEYNFPLRKD 261
+ + D ++E+ +R D
Sbjct: 279 MVVLHGDRVEEHILKMRTD 297
>gi|17554384|ref|NP_498806.1| Protein PBS-6 [Caenorhabditis elegans]
gi|21903455|sp|P34286.2|PSB1_CAEEL RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome subunit beta 6
gi|12276021|gb|AAG50223.1|AF303265_1 proteasome component C5 [Caenorhabditis elegans]
gi|351020646|emb|CCD62635.1| Protein PBS-6 [Caenorhabditis elegans]
Length = 258
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 129/257 (50%), Gaps = 48/257 (18%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKL--FDHYYYRPTYNF 70
+ ++PYS GG+T A++G ++AI+ASDTR++ NI TR+ K+ + T F
Sbjct: 41 RQRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGF 100
Query: 71 ----LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
L + + Y ++ MS A+++S +Y +RFFPYYT I+AG+D G
Sbjct: 101 YGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHG 160
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
KG V+SYDPIG ER + A G++ ++ LD Q+G + S
Sbjct: 161 KGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQIGHVTLS------------------ 202
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
E ++ + L++AIS++KD+F AAER+I TGD +HL I
Sbjct: 203 --------------------EGYERPELTLDRAISLMKDSFRGAAEREISTGDKIHL-VI 241
Query: 247 TKDG--IKEYNFPLRKD 261
+ G + PLR+D
Sbjct: 242 AEAGKPVVVKFLPLRED 258
>gi|213401303|ref|XP_002171424.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
gi|211999471|gb|EEB05131.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
Length = 193
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 91/157 (57%), Gaps = 6/157 (3%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT--- 67
Q F PY NGGT V +AG D++IIA DTR GYNI TR ++ D T
Sbjct: 3 QSRFDPYVQNGGTIVGIAGEDFSIIAGDTRNVNGYNINTRFSPRVHEVGDKLILGATGFE 62
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ L + +Y H ++MS +S ++M+ M+YGKRFFPYY T++AGLD +G
Sbjct: 63 ADALTLVKRIRQRIDLYHDNHKRIMSPSSCSRMVQTMLYGKRFFPYYVYTLVAGLDEKGV 122
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGI 164
G +YS+DP+G ER RA GS+ + + LDNQV +
Sbjct: 123 GALYSFDPVGSYEREWCRAAGSAANFMLSFLDNQVNL 159
>gi|302841986|ref|XP_002952537.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
gi|300262176|gb|EFJ46384.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
Length = 212
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 114/248 (45%), Gaps = 61/248 (24%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD------------HYYYRPTYNFLMI 73
T VAVAG DY I+A TR+S G++I TR+ S L + + L
Sbjct: 14 TVVAVAGEDYCIVAGSTRMSTGFSILTRDASMLLQLTDKVVVASAGMQADRKALHKLLQH 73
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+T Y H H + M ++ A+++S +Y RFFP YT ++AGLD +G+G VY+Y
Sbjct: 74 RNVT------YQHNHGRAMGVSAAAQLLSNTLYYNRFFPLYTFNLVAGLDEQGRGAVYNY 127
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
D IG ER+ + GS L+Q +L+ G +R D+
Sbjct: 128 DAIGSYERSGYFCQGSGKELIQPVLE-----------------GILRRPDV--------- 161
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
P A+ +VKDAF +A ERDIYTGD V + ITKDGIK
Sbjct: 162 -----------------HVPFRTCMALDLVKDAFVSAGERDIYTGDKVEILIITKDGIKR 204
Query: 254 YNFPLRKD 261
L+ D
Sbjct: 205 EELQLKLD 212
>gi|336272341|ref|XP_003350927.1| hypothetical protein SMAC_04232 [Sordaria macrospora k-hell]
gi|380090694|emb|CCC04864.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 151
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 97/179 (54%), Gaps = 28/179 (15%)
Query: 83 MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERA 142
MY + H K MS + A+ +S ++Y KRFFPYY I+ GLD EGKG VYSYDP+G ER
Sbjct: 1 MYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAILGGLDEEGKGAVYSYDPVGSYERE 60
Query: 143 NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLG 202
RAGG++ +L+ LDNQV + + S +G +AL +
Sbjct: 61 QCRAGGAAASLIMPFLDNQVNF--KNQYEPGSGVG-------------HALQER------ 99
Query: 203 FRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
++ P+ + +VKDAF A ER I GDG+ + IT+DGI+E PL+KD
Sbjct: 100 -------ERKPLTRSEGEILVKDAFDGAVERHIEVGDGLQMMVITRDGIEEVLLPLKKD 151
>gi|71028614|ref|XP_763950.1| proteasome beat subunit [Theileria parva strain Muguga]
gi|68350904|gb|EAN31667.1| proteasome beat subunit, putative [Theileria parva]
Length = 218
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 130/244 (53%), Gaps = 48/244 (19%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT--- 67
+ F+PY +NGGT +A +YA+IA+DTRLS Y I+TR +KLF D +
Sbjct: 5 EERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGTSGMQ 64
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ L + ++ ++Y + HN+ + ++A+++S ++YG+RFFPYYT I+ G+D +GK
Sbjct: 65 ADMLALQSVLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGK 124
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G V YD +G+ + A G+S +L+ ++LDN ++ +++++K
Sbjct: 125 GVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDN---LLNGNNQKVKP------------- 168
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
E+N+ LE +++VK+A +A ERDI TGD L +
Sbjct: 169 -EVNS-----------------------LEDLVNLVKNAMVSAVERDICTGDSAEL--VI 202
Query: 248 KDGI 251
DG+
Sbjct: 203 CDGV 206
>gi|296413676|ref|XP_002836535.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630362|emb|CAZ80726.1| unnamed protein product [Tuber melanosporum]
Length = 257
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 127/264 (48%), Gaps = 52/264 (19%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF----DHYYYRPTYN 69
QH F+PY+DNGGT + + G D+ ++A DTR ++GYNI +R + K++ D+ T
Sbjct: 30 QHSFNPYTDNGGTIIGITGEDFVVLAGDTRHTSGYNINSRTEKKVYRLGEDNSLVLATVG 89
Query: 70 F---------LMIFTITILPFQMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
F M+ + F HN K MS ++ A+ +S +YG RFFP Y + ++
Sbjct: 90 FGADSKDVAETMMRAVNDFKFN-----HNLKNMSVSAAAQYLSTFLYGNRFFPKYANCVL 144
Query: 120 AGLDPEGKGCVYSYDPIGHTERAN--FRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
AGLD +G+ +YSYD +G + + GS+ +L+ LDNQV
Sbjct: 145 AGLDKDGRARLYSYDSVGSYSKQGESRASAGSASSLIVPFLDNQVEF------------- 191
Query: 178 GIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYT 237
K + + QE P+ +VKDAFT+A ER I
Sbjct: 192 ------------------KNQFVPSSKGQEERPVVPLDPVTVAKLVKDAFTSATERHIEV 233
Query: 238 GDGVHLCAITKDGIKEYNFPLRKD 261
GDG+ + +TKDG+ E L+KD
Sbjct: 234 GDGLQIITVTKDGVSEEVVDLKKD 257
>gi|387592573|gb|EIJ87597.1| hypothetical protein NEQG_02144 [Nematocida parisii ERTm3]
gi|387595200|gb|EIJ92825.1| hypothetical protein NEPG_02224 [Nematocida parisii ERTm1]
Length = 242
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 43/248 (17%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLM--IFT 75
Y DN GT++++ G D+ ++ASDTR SA YNI TR +K F D + T F F
Sbjct: 32 YGDNSGTSLSIIGADFCVVASDTRHSAPYNINTRHATKSFCLDGRFILSTTGFYADSRFV 91
Query: 76 ITILPFQM--YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
T L +Q+ Y ++NK M A ++ +++Y RFFP +T + G + E K ++SY
Sbjct: 92 YTELAYQIDKYQFKYNKKMGIEQAAALLHVLLYKHRFFPKFTYCCLVGFNEEEKPKIFSY 151
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
DP+G + R GS +LQ +LD+ + ++ K D T
Sbjct: 152 DPVGSYQETPCRCNGSGTTMLQPMLDSWITRKNWHCEEGK---------DYVCTE----- 197
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
E+ IS+VKD F + AE D+ TGDG+ + I KDGI
Sbjct: 198 -----------------------EEVISLVKDVFNSVAETDVKTGDGLEVYVIKKDGITR 234
Query: 254 YNFPLRKD 261
+PLR D
Sbjct: 235 EEYPLRSD 242
>gi|399219027|emb|CCF75914.1| unnamed protein product [Babesia microti strain RI]
Length = 214
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 128/251 (50%), Gaps = 46/251 (18%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPT-YNFLM 72
F+PY +NGGT +A A D+A++ +DTRLS GY+I++R SK L D N
Sbjct: 4 FNPYVNNGGTVIAAAKDDFAVLVADTRLSVGYSIHSRRVSKVTRLTDRIIIGTAGMNADT 63
Query: 73 IFTITILPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
I L Q +Y ++H++ +++++S+++YGKRFFPYYT ++ G+D +G+ V
Sbjct: 64 IALHKQLEAQVTIYQNKHHENPDIHCISQLLSVILYGKRFFPYYTFNLLVGIDMKGQAYV 123
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
++YD IG+ E + A G+ L+ ++LD+++G
Sbjct: 124 FTYDAIGNFESTAYSAHGTGSNLITSILDSKIGC-------------------------- 157
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
N + P LE ++++KDA ++AAERDIYTGD + + +
Sbjct: 158 --------------NNQKQGTPPNTLEDYVNLLKDAISSAAERDIYTGDSAEIFILNPNV 203
Query: 251 IKEYNFPLRKD 261
+ FPLR D
Sbjct: 204 SQPILFPLRGD 214
>gi|449704101|gb|EMD44406.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 225
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 125/261 (47%), Gaps = 52/261 (19%)
Query: 3 LVTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHY 62
+ T+Q + + +SPY DN GT V + G D+ +IASDTR+S Y I TR SK++
Sbjct: 6 MFTQQPVREAKNNQWSPYEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLT 65
Query: 63 YYRPTYNFLMIFTITILPFQM------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
M I L Q+ Y +E+ K MST S+A+++S +Y RFFPYY+
Sbjct: 66 SKCVFTGSGMRADIKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSF 125
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVL 176
+++AG++ +GK Y+YD +G E + GS L LLD+
Sbjct: 126 SLLAGINSKGKAVTYNYDAVGSFEERKYSCSGSGEELAYPLLDS---------------- 169
Query: 177 GGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIY 236
LL R + P+ ++AI++ +D T+A ERDI+
Sbjct: 170 -----------------------LLKDRTE------PLGEQEAINIARDVMTSACERDIH 200
Query: 237 TGDGVHLCAITKDGI-KEYNF 256
TGD V + + +GI KE +F
Sbjct: 201 TGDNVEIVILNSNGIRKEVHF 221
>gi|389584151|dbj|GAB66884.1| proteasome subunit beta type 1 [Plasmodium cynomolgi strain B]
Length = 241
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 51/263 (19%)
Query: 10 ETPIQH-----HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR---EQSKLFDH 61
E ++H ++PY DNGGT + V G DY I+A+DTRLS Y+IYTR + SKL D
Sbjct: 19 EAAVEHGRGFKRWNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDK 78
Query: 62 YYYRPT---YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
+ + + ++ ++++ EH +A+++ +++Y +RFFPYYT +
Sbjct: 79 CIIGSSGMQSDIKTLHSLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNL 138
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AG+ E KG +Y+YD IG A GS AL+ +LDN+ ++ ++ +K+
Sbjct: 139 LAGVSNENKGVLYNYDAIGSYCEATHSCVGSGSALILPILDNR---MEQKNQLIKN---- 191
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
L F ++++D VKDA T+A ERDIYTG
Sbjct: 192 ----------------------LNFNLRDDID-----------FVKDAITSATERDIYTG 218
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D + I G+ L++D
Sbjct: 219 DKTEIYIIDHMGVNTTTLELKQD 241
>gi|296004560|ref|XP_002808699.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
gi|225631686|emb|CAX63970.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
Length = 240
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 124/263 (47%), Gaps = 51/263 (19%)
Query: 10 ETPIQH-----HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR---EQSKLFDH 61
E I+H + PY DNGGT + + G DY I+A+DTRLS Y+IYTR + SKL D
Sbjct: 18 ENVIEHGRGFKRWYPYIDNGGTVIGLTGKDYVILAADTRLSLSYSIYTRFCPKISKLTDK 77
Query: 62 YYYRPT---YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
+ + + ++ Q+++ EH+ +A+++ +++Y +RFFPYY I
Sbjct: 78 CIIGSSGMQSDIKTLHSLLQKKIQLFVLEHSHYPDIHVIARLLCVILYSRRFFPYYAFNI 137
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AG+D KG +Y+YD +G A GS L+ +LDN+V + K+ L
Sbjct: 138 LAGVDENNKGVLYNYDSVGSYCEATHSCVGSGSQLILPILDNRV--------EQKNQL-- 187
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+ T L I+ VKDA T+A ERDIYTG
Sbjct: 188 ------------------------------IKNTNFNLGDDINFVKDAITSATERDIYTG 217
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D + I K GI L++D
Sbjct: 218 DKTLIYVIDKMGINVNTLDLKQD 240
>gi|67475302|ref|XP_653346.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56470287|gb|EAL47959.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
Length = 226
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 126/262 (48%), Gaps = 53/262 (20%)
Query: 3 LVTKQ-ILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH 61
+ T+Q + E + +SPY DN GT V + G D+ +IASDTR+S Y I TR SK++
Sbjct: 6 MFTQQPVREAKNKDQWSPYEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPL 65
Query: 62 YYYRPTYNFLMIFTITILPFQM------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYT 115
M I L Q+ Y +E+ K MST S+A+++S +Y RFFPYY+
Sbjct: 66 TSKCVFTGSGMRADIKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYS 125
Query: 116 STIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSV 175
+++AG++ +GK Y+YD +G E + GS L LLD+
Sbjct: 126 FSLLAGINSKGKAVTYNYDAVGSFEERKYSCSGSGEELAYPLLDS--------------- 170
Query: 176 LGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDI 235
LL R + P+ ++AI++ +D T+A ERDI
Sbjct: 171 ------------------------LLKDRTE------PLGEQEAINIARDVMTSACERDI 200
Query: 236 YTGDGVHLCAITKDGI-KEYNF 256
+TGD V + + +GI KE +F
Sbjct: 201 HTGDNVEIVILNSNGIRKEVHF 222
>gi|156095478|ref|XP_001613774.1| proteasome subunit beta type 1 [Plasmodium vivax Sal-1]
gi|148802648|gb|EDL44047.1| proteasome subunit beta type 1, putative [Plasmodium vivax]
Length = 241
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 131/263 (49%), Gaps = 51/263 (19%)
Query: 10 ETPIQH-----HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR---EQSKLFDH 61
E ++H ++PY DNGGT + V G DY I+A+DTRLS Y+IYTR + SKL D
Sbjct: 19 EAVVEHGRGFKRWNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDK 78
Query: 62 YYYRPT---YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
+ + + ++ ++++ EH +A+++ +++Y +RFFPYYT +
Sbjct: 79 CIIGSSGMQSDIKTLHSLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNL 138
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+AG+ + KG +Y+YD IG A GS AL+ +LDN+ ++ ++ +K+
Sbjct: 139 LAGVSNDSKGVLYNYDAIGSYCEATHSCVGSGSALILPILDNR---MEQKNQLIKN---- 191
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
L F ++++D VKDA T+A ERDIYTG
Sbjct: 192 ----------------------LNFNLRDDLD-----------FVKDAITSATERDIYTG 218
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D + I + G+ + L++D
Sbjct: 219 DSTEIYIIDQMGVNTTSLELKQD 241
>gi|125564290|gb|EAZ09670.1| hypothetical protein OsI_31953 [Oryza sativa Indica Group]
Length = 178
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 94/179 (52%), Gaps = 35/179 (19%)
Query: 83 MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERA 142
+Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD EGKGCV++YD +G ER
Sbjct: 35 LYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERT 94
Query: 143 NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLG 202
+ A G+ AL+ +LDNQ L S +LL
Sbjct: 95 GYSAQGTGSALIMPVLDNQ-------------------------------LKSPSPLLLP 123
Query: 203 FRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
R+ TP+ +A+ +VKD F +A ERDIYTGD + + I K G K LRKD
Sbjct: 124 ARDAV----TPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 178
>gi|414886156|tpg|DAA62170.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 213
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 35/179 (19%)
Query: 83 MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERA 142
+Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD EGKGCV++YD +G ER
Sbjct: 70 LYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERT 129
Query: 143 NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLG 202
+ A G+ L+ +LDNQ L S +LL
Sbjct: 130 GYSAQGTGSTLIMPVLDNQ-------------------------------LKSPSPLLLP 158
Query: 203 FRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
R+ TP+ +AI +VKD F +A ERDIYTGD + + I K G K LRKD
Sbjct: 159 ARDA----VTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKVGTKREYIDLRKD 213
>gi|167393146|ref|XP_001740446.1| proteasome subunit beta type-1 [Entamoeba dispar SAW760]
gi|165895460|gb|EDR23141.1| proteasome subunit beta type-1, putative [Entamoeba dispar SAW760]
Length = 221
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 126/269 (46%), Gaps = 67/269 (24%)
Query: 3 LVTKQ-ILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH 61
+ T+Q + E + +SPY DN GT V + G D+ ++ASDTR+S Y I TR SK++
Sbjct: 1 MFTQQPVREAKSKDEWSPYEDNCGTCVVIKGEDFVVVASDTRMSRDYMILTRNDSKIY-- 58
Query: 62 YYYRPTYNFLMIFTITILPFQM-------------YLHEHNKVMSTTSLAKMISIMMYGK 108
IFT + + M Y +E+ K MST S+A+++S +Y
Sbjct: 59 -----PLTSKCIFTGSGMRADMKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSH 113
Query: 109 RFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHS 168
RFFPYY+ +++AG++ +GK Y+YD +G E + GS L LLD+
Sbjct: 114 RFFPYYSFSLLAGINSKGKAVTYNYDAVGSFEERKYSCSGSGEELAYPLLDS-------- 165
Query: 169 SKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFT 228
LL R + P+ ++AI++ +D T
Sbjct: 166 -------------------------------LLKDRTE------PLGEQEAINIARDVMT 188
Query: 229 AAAERDIYTGDGVHLCAITKDGI-KEYNF 256
+A ERDI+TGD V + + GI KE +F
Sbjct: 189 SACERDIHTGDNVEIVILNSKGIRKEVHF 217
>gi|378754633|gb|EHY64663.1| hypothetical protein NERG_02282 [Nematocida sp. 1 ERTm2]
Length = 242
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 43/248 (17%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLM----I 73
Y DN GT++++ G D+ ++ASDTR SA YNI TR+ +K F D + T F I
Sbjct: 32 YGDNSGTSLSIVGADFCVVASDTRHSAMYNINTRQATKSFCLDGRFILSTTGFYADSRYI 91
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
F+ Y ++NK M+ A ++ +++Y RFFP +T + G + + ++SY
Sbjct: 92 FSKLAYEIDKYQFKYNKKMAIEQAAALLHVLLYTHRFFPKFTYCCLVGFNENNEPKIFSY 151
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
DP+G + R GS ALLQ +LD+ + ++ K+ +
Sbjct: 152 DPVGSYQETPCRCNGSGTALLQPMLDSWITRKNWYCEEGKNYV----------------- 194
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
E+ IS+VKD F + AE D+ TGDG+ + I KD I
Sbjct: 195 --------------------CTEEEVISLVKDVFNSVAETDVKTGDGLEVYVIKKDQIVR 234
Query: 254 YNFPLRKD 261
+PLR D
Sbjct: 235 SEYPLRSD 242
>gi|403374976|gb|EJY87456.1| Proteasome subunit beta type [Oxytricha trifallax]
Length = 255
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 48/262 (18%)
Query: 8 ILETPIQHH--FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHY 62
+L+ + HH F+PY +N GTTVA+AG D+ ++ASDTR+S G+NI +RE S+ L D
Sbjct: 34 MLKDNVSHHSGFNPYVNNQGTTVAIAGEDFVLVASDTRISQGFNILSREYSRTTRLTDQC 93
Query: 63 YYRP---TYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
+ + + I + Y + K + SLA+++ +YG+RF P+Y ++
Sbjct: 94 VITSGGMVADIETLHKLLISKVKTYQRQFKKTPTVESLAQLLGNTLYGRRFMPFYAFNLL 153
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGI 179
G+D G+G VY YD IG ++ + GS L +LDNQ H
Sbjct: 154 CGIDVNGQGTVYGYDAIGSYDKLTYGVQGSGSELGAPILDNQ--FTGH------------ 199
Query: 180 RTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
N L L ++ + V+ T KD + AERDIYTGD
Sbjct: 200 -----------NYLVKTLA-----KDVQEVEDTA----------KDIINSIAERDIYTGD 233
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
V + + K G+ P+R+D
Sbjct: 234 QVEVVIVNKHGVTVKREPIRRD 255
>gi|159488463|ref|XP_001702229.1| hypothetical protein CHLREDRAFT_133001 [Chlamydomonas reinhardtii]
gi|158271266|gb|EDO97089.1| predicted protein [Chlamydomonas reinhardtii]
Length = 245
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 121/262 (46%), Gaps = 57/262 (21%)
Query: 14 QHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD-----HYYYRPT 67
QH +SPY DNGGT VAVAG DY I+A+ TR+S G++I TRE + + R
Sbjct: 27 QHAAWSPYDDNGGTVVAVAGEDYCIVAASTRMSTGFSILTREATMMLQLGPQSRQVGRGR 86
Query: 68 YNFLMIFTITILPFQMYLH---EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
+ + + + L + +K +++S +Y KRFFP+YT + AGLD
Sbjct: 87 EGLMHVRRLAGVVCGRRLKKGWDQDKEAELWGAGRLLSNTLYYKRFFPFYTFNLCAGLDE 146
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
+G+G VY+YD IG ER SG Q + + LG DL
Sbjct: 147 QGRGAVYNYDAIGSYER--------SGYFCQGF------------GRSRRFLG---YCDL 183
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVP-----LEKAISVVKDAFTAAAERDIYTGD 239
L N TP P A+ +VKDAF +A ERDIYTGD
Sbjct: 184 RLEARAN--------------------TPPPSHTPTSSTALDLVKDAFVSAGERDIYTGD 223
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
V + IT++G++ + L+ D
Sbjct: 224 QVEILIITREGVRRDSLQLKLD 245
>gi|429329412|gb|AFZ81171.1| proteasome subunit beta type 1, putative [Babesia equi]
Length = 218
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 120/241 (49%), Gaps = 48/241 (19%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNF 70
F+PY +NGGT VA +YA+IA+DTRLS GY I+TR SK+ D + +
Sbjct: 8 FNPYVNNGGTVVAATWKNYAVIAADTRLSIGYAIHTRNVSKMIKLTDTCILGTSGMQADM 67
Query: 71 LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
L + + ++Y H+K S ++A+++S ++Y +RFFPYYT I+ G+D G G V
Sbjct: 68 LALHSAMERQVELYRFTHHKTPSFGAIAQLLSTILYSRRFFPYYTFNILCGIDENGNGVV 127
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
SYD IG+ + A G+S +L+ ++ D Q I ++ + EI
Sbjct: 128 CSYDAIGNYNYEKYAAQGTSSSLITSIFDCQ-----------------INGNNCLVKPEI 170
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
+ LE ++++K+A +A ERDIYTGD + + DG
Sbjct: 171 KS-----------------------LEDLVNIIKNALASAVERDIYTGDSAQV--VICDG 205
Query: 251 I 251
I
Sbjct: 206 I 206
>gi|414589907|tpg|DAA40478.1| TPA: hypothetical protein ZEAMMB73_835212 [Zea mays]
Length = 188
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 92/179 (51%), Gaps = 35/179 (19%)
Query: 83 MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERA 142
+Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD EGKGCV++YD +G ER
Sbjct: 45 LYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERT 104
Query: 143 NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLG 202
+ A G+ L+ +LDNQ L S +LL
Sbjct: 105 GYSAQGTGSTLIMPVLDNQ-------------------------------LKSPSPLLLP 133
Query: 203 FRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
R+ TP+ +AI +VKD F +A ERDIYTGD + + I K G LRKD
Sbjct: 134 VRDA----VTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKAGTMREYIDLRKD 188
>gi|312375789|gb|EFR23090.1| hypothetical protein AND_13702 [Anopheles darlingi]
Length = 219
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 71/93 (76%)
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ +I + QMY +H K MST ++A+M+SI+MY +RFFPYY S ++AGLD GKG VY
Sbjct: 25 LLGSIVGVRMQMYKDQHQKEMSTPAVAQMLSILMYNRRFFPYYVSNVLAGLDLNGKGVVY 84
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGI 164
SYDPIGH E +RAGGS+G LLQ +LDNQ+G+
Sbjct: 85 SYDPIGHCEMTTYRAGGSAGPLLQPVLDNQIGL 117
>gi|323334738|gb|EGA76111.1| Pre7p [Saccharomyces cerevisiae AWRI796]
Length = 184
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 32/181 (17%)
Query: 82 QMYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTE 140
+ Y +HN K +S S A+ I ++YGKRFFPYY TIIAGLD +GKG VYS+DP+G E
Sbjct: 35 KWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYE 94
Query: 141 RANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTIL 200
R RAGG++ +L+ LDNQV Q + G + + + LS
Sbjct: 95 REQCRAGGAAASLIMPFLDNQVNF----KNQYEPGTNG------KVKKPLKYLS------ 138
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+E+ I +V+D+FT+A ER I GDG+ + +TKDG+++ + L++
Sbjct: 139 ---------------VEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKR 183
Query: 261 D 261
D
Sbjct: 184 D 184
>gi|197129777|gb|ACH46275.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 149
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 85/135 (62%), Gaps = 17/135 (12%)
Query: 9 LETPIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
LE P+QHH FSPY+ NGGT +A+AG D+ I+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 18 LEAPVQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKC-----YKLT 72
Query: 68 Y-----------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY
Sbjct: 73 ERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 132
Query: 117 TIIAGLDPEGKGCVY 131
II GLD EGKG VY
Sbjct: 133 NIIGGLDEEGKGAVY 147
>gi|84996531|ref|XP_952987.1| proteasome subunit [Theileria annulata strain Ankara]
gi|65303983|emb|CAI76362.1| proteasome subunit, putative [Theileria annulata]
Length = 199
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 124/232 (53%), Gaps = 46/232 (19%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT--- 67
+ F+PY +NGGT +A +YA+IA+DTRLS Y I+TR +KLF D +
Sbjct: 5 EERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGTSGMQ 64
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ L + ++ ++Y HN+ + ++A+++S ++YG+RFFPYYT I+ G+D +GK
Sbjct: 65 ADMLALQSVLERQIELYRFTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGK 124
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G V YD +G+ + A G+S +L+ ++LDN ++ +++++K
Sbjct: 125 GVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDN---LLNGNNQKVKP------------- 168
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD 239
E+N+ LE +++VK+A +A ERDI TG+
Sbjct: 169 -EVNS-----------------------LEDLVNLVKNAMVSAVERDICTGN 196
>gi|403224082|dbj|BAM42212.1| proteasome subunit [Theileria orientalis strain Shintoku]
Length = 220
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT--- 67
+ F+PY +NGGT +A +YA+IA+DTRLS Y I+TR +KL D +
Sbjct: 7 EEGFNPYVNNGGTVIAATWKNYAVIAADTRLSLRYLIHTRYSTKLLKLTDKCILGTSGMQ 66
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ L + ++ +MY H+K + ++A+++S ++YG+RFFPYYT I+ GLD G
Sbjct: 67 ADMLALQSVIERQIEMYRFTHHKEPTFGAIAQLLSTVLYGRRFFPYYTFNILCGLDENGN 126
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G +YD +G+ + A G+S +L+ +LDN ++ +++Q+K
Sbjct: 127 GVTCNYDAVGNYNYEKYAAQGTSSSLVVPILDN---LLNGNNQQVKP------------- 170
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
+IN+ LE +++VK+A +A ERDI TGD L +
Sbjct: 171 -QINS-----------------------LEDLVNLVKNAMVSAVERDICTGDSAEL--VV 204
Query: 248 KDGI 251
DG+
Sbjct: 205 CDGV 208
>gi|149549948|ref|XP_001513174.1| PREDICTED: proteasome subunit beta type-1-like, partial
[Ornithorhynchus anatinus]
Length = 261
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 90/141 (63%), Gaps = 6/141 (4%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY---NFLMIFTITIL 79
T +A+AG D++I+ASDTRLS GY+I++R+ K + D + + L + I
Sbjct: 1 TVLAIAGEDFSIVASDTRLSEGYSIHSRDNPKCYKLTDRTVIGCSGFHGDCLTLTKIIEA 60
Query: 80 PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHT 139
+MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD EGKG VYS +PIG
Sbjct: 61 RLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSLNPIGSY 120
Query: 140 ERANFRAGGSSGALLQALLDN 160
+ N++AGG++ +LQ L N
Sbjct: 121 LKDNYKAGGTTNTMLQPLTAN 141
>gi|449525251|ref|XP_004169631.1| PREDICTED: proteasome subunit beta type-1-like, partial [Cucumis
sativus]
Length = 171
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 92/179 (51%), Gaps = 35/179 (19%)
Query: 83 MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERA 142
+Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD EGKGCV++YD +G ER
Sbjct: 28 IYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERV 87
Query: 143 NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLG 202
+ A GS L+ LDNQ L S +LL
Sbjct: 88 GYSAQGSGSTLITPFLDNQ-------------------------------LKSPSPLLLP 116
Query: 203 FRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
++ TP+ +AI +VK F +A ERDIYTGD + + + DG++ LR+D
Sbjct: 117 AQDS----STPLSEAEAIDLVKTVFASATERDIYTGDKLEIVVLNADGLRREYMNLRED 171
>gi|10121721|gb|AAG13340.1|AF266220_1 proteasome subunit beta type 1 [Gillichthys mirabilis]
Length = 181
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 22/179 (12%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P++H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K Y+ T
Sbjct: 9 PVEHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKC-----YKLTDTTV 63
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK+M+ ++A M+S ++YG+RFFPYY II
Sbjct: 64 IGCSGFHGDCLTLTKIIDARLKMYKHSNNKMMTCGAIAAMLSTILYGRRFFPYYVYNIIG 123
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQV----GIIQHSSKQMKSV 175
GLD EGKG + P+G +R + S +L LLD ++ G H KSV
Sbjct: 124 GLDEEGKGASTAL-PVGSYQR-DPTGWKISHCMLPPLLDTRLVSKHGRCPHVPLTRKSV 180
>gi|226471338|emb|CAX70750.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 178
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 97/158 (61%), Gaps = 16/158 (10%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKLFDHYYYRPTYNFLM--- 72
F+PY+ NGGT + ++G D+A+IASDTRL G + I +R +LF N L
Sbjct: 2 FNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFK----LGCGNVLGCAG 57
Query: 73 ----IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ T+T L + Y ++H K +ST +LA ++S+ +Y +RFFP+Y S I+ GLD +
Sbjct: 58 FHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD 117
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVG 163
+G +YSYDP+G E +RA GSS A+LQ LD+ VG
Sbjct: 118 -RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVG 154
>gi|156084624|ref|XP_001609795.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154797047|gb|EDO06227.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 217
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 124/263 (47%), Gaps = 60/263 (22%)
Query: 13 IQHH--FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
++HH F+PY +NGGT VA + A+IA+DTRLS GY I+TR SKL +
Sbjct: 1 MEHHSDFNPYVNNGGTVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKL------KKLTQT 54
Query: 71 LMIFTITILP------------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
+I T + ++Y +H++ + +A+++S ++Y +RFFPYYT I
Sbjct: 55 CVIGTSGMQADMHALHSALERQIELYRFKHHREPGISVIAQLLSTILYSRRFFPYYTFNI 114
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ G+D G+G +D IG+ + A G+S +L+ ++LDN
Sbjct: 115 LCGVDENGRGITCGFDAIGNYGFDAYMAKGTSSSLIMSILDNH----------------- 157
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
L RNQ+ ++ LE+ I+V+K A T+A ERDI+TG
Sbjct: 158 ----------------------LTSRNQQKHNEIQ-SLEELINVIKGAMTSAVERDIFTG 194
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D + I P+R D
Sbjct: 195 DAAEVIVIDSMVHDPIRMPMRVD 217
>gi|449329565|gb|AGE95836.1| 20S proteasome alpha-type subunit [Encephalitozoon cuniculi]
Length = 290
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 55/257 (21%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+ F PY DN GTT+ + D+ ++A DTR S+ I +RE SK+F +FL+
Sbjct: 80 KERFDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQ------VGDFLLT 133
Query: 74 FT---------ITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
T + +++ +E + ++ S A ++S ++Y KRFFPYY+ +++G +
Sbjct: 134 GTGFYADTHEVYVKMVYEIRQYEVDDSINIHSAASLLSKILYSKRFFPYYSFCVLSGFE- 192
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
+GK VYSYDPIG GS +++Q LLD+
Sbjct: 193 KGKPYVYSYDPIGSFGSVTCVCSGSGRSMIQPLLDS------------------------ 228
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
+ +N N ++T + E I +V AF +AAERD+ T D + +C
Sbjct: 229 ---------------FIDKKNWNNAEETQLSQEDCIRLVVKAFNSAAERDVKTKDNLEVC 273
Query: 245 AITKDGIKEYNFPLRKD 261
+ ++ + FPLR+D
Sbjct: 274 VMRENQVMRETFPLRRD 290
>gi|19074564|ref|NP_586070.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
gi|74630117|sp|Q8SRH6.1|PSB6_ENCCU RecName: Full=Probable proteasome subunit beta type-6; AltName:
Full=26S proteasome beta-type subunit PRE7; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE7
gi|19069206|emb|CAD25674.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
Length = 290
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 55/257 (21%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
+ F PY DN GTT+ + D+ ++A DTR S+ I +RE SK+F +FL+
Sbjct: 80 KERFDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQ------VGDFLLT 133
Query: 74 FT---------ITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
T + +++ +E + ++ S A ++S ++Y KRFFPYY+ +++G +
Sbjct: 134 GTGFYADTHEVYVKMVYEIRQYEVDDSINIHSAANLLSKILYSKRFFPYYSFCVLSGFE- 192
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
+GK VYSYDPIG GS +++Q LLD+
Sbjct: 193 KGKPYVYSYDPIGSFGSVTCVCSGSGRSMIQPLLDS------------------------ 228
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
+ +N N ++T + E I +V AF +AAERD+ T D + +C
Sbjct: 229 ---------------FIDKKNWNNAEETQLSQEDCIRLVVKAFNSAAERDVKTKDNLEVC 273
Query: 245 AITKDGIKEYNFPLRKD 261
+ ++ + FPLR+D
Sbjct: 274 VMRENQVMRETFPLRRD 290
>gi|401887735|gb|EJT51714.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
asahii CBS 2479]
Length = 251
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 105/231 (45%), Gaps = 57/231 (24%)
Query: 37 IIASDTRLSAGYNIYTREQSKLFD---------HYYYRPTYNFLMIFTITILPFQMYLHE 87
+IA DTR S GYNI TR K+F + + NF + + Y
Sbjct: 22 VIAGDTRQSQGYNIQTRYAKKVFQLTDKVVLATNGFAADGNNF---YKRVKQRLEWYEAN 78
Query: 88 HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAG 147
H+K MS S+A+MI M+YG+RFFPYY I+ G++ +G G VYS+DP+G ER RA
Sbjct: 79 HHKQMSIKSIARMIQTMLYGRRFFPYYVYNILGGIEEDGTGAVYSFDPVGSYEREACRAA 138
Query: 148 GSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQE 207
G++ +L+Q LDNQ+ FRNQ
Sbjct: 139 GAAQSLIQPFLDNQI---------------------------------------YFRNQT 159
Query: 208 NVDKTP------VPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
P +PL IS+V D+FT+A ER I GD + + + G K
Sbjct: 160 FPPGVPRPIPGNLPLGTVISIVLDSFTSATERHIEVGDSLEMYIVMNKGRK 210
>gi|406699677|gb|EKD02876.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
asahii CBS 8904]
Length = 251
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 105/231 (45%), Gaps = 57/231 (24%)
Query: 37 IIASDTRLSAGYNIYTREQSKLFD---------HYYYRPTYNFLMIFTITILPFQMYLHE 87
+IA DTR S GYNI TR K+F + + NF + + Y
Sbjct: 22 VIAGDTRQSQGYNIQTRYAKKVFQLTDKVVLATNGFAADGNNF---YKRVKQRLEWYEAN 78
Query: 88 HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAG 147
H+K MS S+A+MI M+YG+RFFPYY I+ G++ +G G +YS+DP+G ER RA
Sbjct: 79 HHKQMSIKSIARMIQTMLYGRRFFPYYVYNILGGIEEDGTGAIYSFDPVGSYEREACRAA 138
Query: 148 GSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQE 207
G++ +L+Q LDNQ+ F+NQ
Sbjct: 139 GAAQSLIQPFLDNQI---------------------------------------YFKNQT 159
Query: 208 NVDKTP------VPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
P +PL IS+V D+FT+A ER I GD + + + G K
Sbjct: 160 FPPGVPRPIPGNLPLGTVISIVLDSFTSATERHIEVGDSLEMYIVMNKGRK 210
>gi|146186065|ref|XP_001032955.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|146143157|gb|EAR85292.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 247
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 119/261 (45%), Gaps = 59/261 (22%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
++ F+PY N GT A+A D+ I+A D R+S GY+I +R+ SKL R T N +
Sbjct: 33 RNEFNPYVFNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKL-----ARLTDNVFLA 87
Query: 74 FTITILPF-----------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ F MY + + K + ++A ++S +Y KRFFPYYT ++AG
Sbjct: 88 TSGMYADFAALSKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGF 147
Query: 123 DPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQV-GIIQHSSKQMKSVLGGIRT 181
D +G+G V +YD +G + + GS L+ + D G + +Q+ +V
Sbjct: 148 DDKGEGLVINYDAVGSGDFKKYAVLGSGAQLITPVFDQYFEGYNKIKKEQLHTV------ 201
Query: 182 HDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGV 241
E+ IS + D F +A ERDIYTGD +
Sbjct: 202 -----------------------------------EEFISFIVDCFESATERDIYTGDQL 226
Query: 242 HLCAITKDGIKEYN-FPLRKD 261
+ + KD EY FPLRKD
Sbjct: 227 EIVILRKDKAPEYQLFPLRKD 247
>gi|330038504|ref|XP_003239615.1| 26S proteasome SU B6 [Cryptomonas paramecium]
gi|327206539|gb|AEA38717.1| 26S proteasome SU B6 [Cryptomonas paramecium]
Length = 245
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 63/261 (24%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF-------------- 59
+ +F+PY +N GT +++A +Y ++ SDTR G++I TR Q+++F
Sbjct: 31 KKNFNPYQNNSGTIISIANQNYCVVVSDTRYLNGFSIPTRFQTRIFKISEKIILASAGMF 90
Query: 60 -DHYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
D ++++ T + Y + K +S S A IS ++Y KRFFPYY +
Sbjct: 91 ADAFFFQKK---------TKTSIKDYEYGIKKAISVESCAFYISSLLYSKRFFPYYVFNV 141
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
++GLD KG VYS+D +G E+ F G S A +Q LLD+
Sbjct: 142 LSGLDENDKGSVYSFDSVGSFEKLKFNCIGESCAAIQPLLDSYF---------------- 185
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
H L L + S ++ I+ +K+ F A++R I G
Sbjct: 186 --EHQLKLKFNLRTKS---------------------IQDLINSIKEFFLKASKRKIDIG 222
Query: 239 DGVHLCAITKDGIKEYNFPLR 259
DG+ I K GI N+ LR
Sbjct: 223 DGLQFFIINKKGIINENYLLR 243
>gi|300120472|emb|CBK20026.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 118/245 (48%), Gaps = 46/245 (18%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL--- 79
NGGT A+AG DY IIA+DTRL+ GY I +R S+L N +T L
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 80 ---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ Y + H + +ST+++A ++S +Y +RFFP Y ++ GLD G+G +YSYD I
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAI 121
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G E + GS+ + + +LD+ V + K
Sbjct: 122 GSFELMKYAVQGSAQSHIIPILDSCV-----AKKN------------------------- 151
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
RN+ VD + E+A++++K+ FTA ER+ TGD + + +T GI+
Sbjct: 152 -------RNEPYVD---LDREEALNLMKEVFTAGTEREKDTGDQLEILTVTAHGIEREVM 201
Query: 257 PLRKD 261
LRKD
Sbjct: 202 ELRKD 206
>gi|300120426|emb|CBK19980.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 118/245 (48%), Gaps = 46/245 (18%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL--- 79
NGGT A+AG DY IIA+DTRL+ GY I +R S+L N +T L
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 80 ---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ Y + H + +ST+++A ++S +Y +RFFP Y ++ GLD G+G +YSYD I
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAI 121
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G E + GS+ + + +LD+ V + K
Sbjct: 122 GSFELMKYAVQGSAQSHIIPILDSCV-----AKKN------------------------- 151
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
RN+ VD + E+A++++K+ FTA ER+ TGD + + +T GI+
Sbjct: 152 -------RNEPYVD---LDREEALNLMKEVFTAGTEREKDTGDQLEILTVTAHGIEREVM 201
Query: 257 PLRKD 261
LRKD
Sbjct: 202 ELRKD 206
>gi|402466187|gb|EJW01728.1| hypothetical protein EDEG_03753 [Edhazardia aedis USNM 41457]
Length = 225
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 125/263 (47%), Gaps = 48/263 (18%)
Query: 8 ILETPIQHH---FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHY 62
I E IQH F PY N GT++A+ DY I+A+DTR S+ I TR SK++ D
Sbjct: 2 ISEETIQHQGRRFDPYEFNAGTSLAINMNDYLILATDTRHSSEMGINTRNISKIYFLDDL 61
Query: 63 YYRPTYNFLMIFTITI-LPFQM--YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
Y T + + + I L +Q+ Y ++NK M S A ++ ++Y KRFFPYY+ I+
Sbjct: 62 YLIVTGFYADGYEVYINLLYQLIEYESKNNKKMGIRSAAHLLHNLLYRKRFFPYYSYCIL 121
Query: 120 AGLDPEG-KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
G D + K ++S+D +G R GS ++Q LLD+++
Sbjct: 122 GGFDKKSQKFLLFSFDVVGSYGETVCRVDGSGTTMIQPLLDSRI---------------- 165
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
SKL N EN D ++ +VK AF +AAERD+ TG
Sbjct: 166 ----------------SKL-------NWENNDTKVTDCKEVCELVKIAFKSAAERDVKTG 202
Query: 239 DGVHLCAITKDGIKEYNFPLRKD 261
D + L + KDGI+ LR D
Sbjct: 203 DYLDLVVVKKDGIERTLHKLRHD 225
>gi|219114683|ref|XP_002176500.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402501|gb|EEC42514.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 130
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 87/171 (50%), Gaps = 42/171 (24%)
Query: 92 MSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSG 151
MST S+A+M+S +Y KRFFPYY ++ G+D +GKG VYSYD IG ER+ + A GS
Sbjct: 1 MSTPSIAQMLSNTLYYKRFFPYYAFNVMGGVDAQGKGAVYSYDAIGSFERSTYSANGSGQ 60
Query: 152 ALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDK 211
A + LLDN +G N+ +D+
Sbjct: 61 AYIIPLLDNVIG-----------------------------------------NRNRLDE 79
Query: 212 TP-VPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
P + E+ + ++KDAF +A ERDIYTGD V +C + D + +F L+ D
Sbjct: 80 PPNLTAEEVVEILKDAFLSAGERDIYTGDQVEICVVRADSVTTQHFALKAD 130
>gi|68060726|ref|XP_672353.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56489346|emb|CAI05284.1| hypothetical protein PB300285.00.0 [Plasmodium berghei]
Length = 237
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 121/267 (45%), Gaps = 71/267 (26%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTR---EQSKLFDHYYYRPT--------------- 67
T + + G +Y I+A DTRLS Y+IYTR + SK+ D +
Sbjct: 11 TGIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSLLQV 70
Query: 68 -------YNF----LMIFTITIL--PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYY 114
YN+ L+IF IL Q++ EH+ S +AK++ + +Y +RFFPYY
Sbjct: 71 LLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYY 130
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
T I+AG+D GKG +YSYD IG ++ GS +L+ +LDN+V + K+
Sbjct: 131 TFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNRV--------EQKN 182
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
L I+ D L +IN VKDA T+A ERD
Sbjct: 183 QL--IKNMDFNLRDDIN------------------------------FVKDAMTSATERD 210
Query: 235 IYTGDGVHLCAITKDGIKEYNFPLRKD 261
IYTGD + I GI L++D
Sbjct: 211 IYTGDKAEIYIIDNLGINTTLLDLKQD 237
>gi|414886162|tpg|DAA62176.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 135
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 86/170 (50%), Gaps = 35/170 (20%)
Query: 92 MSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSG 151
MS ++A+++S +Y KRFFPYY ++ GLD EGKGCV++YD +G ER + A G+
Sbjct: 1 MSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGS 60
Query: 152 ALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDK 211
L+ +LDNQ L S +LL R+
Sbjct: 61 TLIMPVLDNQ-------------------------------LKSPSPLLLPARDA----V 85
Query: 212 TPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
TP+ +AI +VKD F +A ERDIYTGD + + I K G K LRKD
Sbjct: 86 TPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKVGTKREYIDLRKD 135
>gi|225712140|gb|ACO11916.1| Proteasome subunit beta type-1-A [Lepeophtheirus salmonis]
Length = 238
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 48/264 (18%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DH 61
TK + + F PY N GTT+A++ P++ I ASD R S+ + I++R SK+F +
Sbjct: 16 TKGFTKINGRKQFGPYESNSGTTLAISTPEFNIFASDIRNSSSFTIHSRNCSKIFKLKNS 75
Query: 62 YYYRPTYNF---LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
+ T F +F I +++ + K M + LA + ++Y KRFFP+Y +
Sbjct: 76 ITFSATGFFGDIYRVFEILKHKQELFYQQFEKEMLVSELAHFLMNVLYSKRFFPFYGFIV 135
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ G++ G+ +YSYDP+G ++ R G+ ++Q +LD+++
Sbjct: 136 LGGIE-NGECAMYSYDPVGSYQKDTARCYGTGMKIVQPILDSKI---------------- 178
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+R + E+ I++VK AF + +ERD+ TG
Sbjct: 179 ------------------------YRKNNLKKEEEFKEEEIIAIVKKAFESVSERDVKTG 214
Query: 239 DGVHLCAITKDGIKEYN-FPLRKD 261
DGV + I KDG + N LR+D
Sbjct: 215 DGVEIVIIRKDGSTDSNIIKLRRD 238
>gi|300702270|ref|XP_002995154.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
gi|239604000|gb|EEQ81483.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
Length = 282
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 51/262 (19%)
Query: 4 VTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---D 60
VTKQ + F+PY DN GT VA+ D I+A+DTR + IY+R K++ D
Sbjct: 68 VTKQK-----EPQFNPYEDNSGTAVAIKLNDLIIVAADTRHCSEMGIYSRNTPKIYYIGD 122
Query: 61 HYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ + I I IL +Q+ L+E +S SLA + S +MY KR FPYY+ ++
Sbjct: 123 YLVTITGFYADGIELINILKYQVLLYESFNKISIHSLANLASKVMYSKRLFPYYSYVTLS 182
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
G +G+ VYS+D +GH E+ + GS + +Q LLD+ + + K+ +G
Sbjct: 183 GF-CDGEPFVYSFDCLGHFEKVSTVCNGSGASFIQPLLDSLI--------EKKNWIG--- 230
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEK-AISVVKDAFTAAAERDIYTGD 239
++PV E+ SVV+ AF AA+ERD+ TGD
Sbjct: 231 ------------------------------ESPVVDEEYTKSVVRKAFDAASERDVKTGD 260
Query: 240 GVHLCAITKDGIKEYNFPLRKD 261
+ + + ++G + LR+D
Sbjct: 261 YLEMYVVRENGAVKSVEKLRQD 282
>gi|429962010|gb|ELA41554.1| hypothetical protein VICG_01418 [Vittaforma corneae ATCC 50505]
Length = 275
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 117/245 (47%), Gaps = 45/245 (18%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTYNFLMIFTI- 76
Y +NGGT++ V + IIASDTR S+ Y I +R+ +K+F +Y T F F +
Sbjct: 73 YENNGGTSLVVTTDNKIIIASDTRHSSDYTINSRKMTKIFKIGEFYLATTGFFADSFEVY 132
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
T L +Q+ +E ++ +LA ++ ++Y KRFFPYY+ I+ G D G VYSYDP+
Sbjct: 133 TNLMYQVKQYETYSRITLKALAHLLHNLLYSKRFFPYYSYAILCGFD-NGTATVYSYDPV 191
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G ++ R GSS ++Q LLD S + G D
Sbjct: 192 GSYDKTRCRCNGSSSVMIQPLLD--------------SWIMGKNFKDF------------ 225
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
K P + + +VK AF AA+ERD+ T D + + I KD +
Sbjct: 226 --------------KEP-SFSETLELVKKAFDAASERDVKTKDYLEIYVIEKDSMSHELI 270
Query: 257 PLRKD 261
PLRKD
Sbjct: 271 PLRKD 275
>gi|426355245|ref|XP_004045039.1| PREDICTED: proteasome subunit beta type-1 [Gorilla gorilla gorilla]
Length = 245
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 6/121 (4%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT- 67
P+Q FSPY NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D +
Sbjct: 97 PLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 156
Query: 68 --YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 157 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 216
Query: 126 G 126
G
Sbjct: 217 G 217
>gi|303390057|ref|XP_003073260.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
ATCC 50506]
gi|303302405|gb|ADM11900.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
ATCC 50506]
Length = 287
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 114/260 (43%), Gaps = 53/260 (20%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH-------- 61
E + F+PY DN GTTV + D+ I+A DTR S+ I +RE SK+F
Sbjct: 73 EVKEEEKFNPYEDNSGTTVCLKQDDFIIVAGDTRHSSDMVINSREMSKIFRMGNFLLTGT 132
Query: 62 YYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+Y TY T IL +++ + MS S A ++S ++Y +RFFPYY+ ++G
Sbjct: 133 GFYADTYEVYRKMTDEILQYEV-----DGPMSIHSSANLLSKILYSRRFFPYYSFCTLSG 187
Query: 122 LDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
+ +GK +Y YDP+G + GS +++Q LLD+
Sbjct: 188 FE-KGKAYLYQYDPLGSYDLTTCVCKGSGRSMIQPLLDS--------------------- 225
Query: 182 HDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGV 241
+ +N N + E I +V AF + AERDI T D +
Sbjct: 226 ------------------FIDKKNWNNASDAQISQEDCIRLVVKAFNSVAERDIKTKDNL 267
Query: 242 HLCAITKDGIKEYNFPLRKD 261
+ + + + PLR+D
Sbjct: 268 EIYVVREHELTHQILPLRRD 287
>gi|119567806|gb|EAW47421.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_b [Homo sapiens]
Length = 166
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 6/121 (4%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT- 67
P+Q FSPY NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 68 --YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 G 126
G
Sbjct: 145 G 145
>gi|401827105|ref|XP_003887645.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
gi|392998651|gb|AFM98664.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
Length = 290
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 43/250 (17%)
Query: 15 HHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLM 72
F+PY DN GT V + D+ +++ DTR S+ I +RE SK+F +++ T +
Sbjct: 81 ERFNPYEDNSGTVVCLKQDDFVVVSGDTRHSSEMVINSREMSKIFRIGNFFLTGTGFYAD 140
Query: 73 IFTITI-LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+ + + +++ +E + ++ S A ++S ++Y +RFFPYY+ ++G D GK +Y
Sbjct: 141 SHEVYVKMEYEIRQYEVDGPINIHSAANLLSKILYSRRFFPYYSYCTLSGFD-NGKPYIY 199
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
+YDP+G E GS +++Q LLD+
Sbjct: 200 AYDPVGSFESVTCECNGSGRSMIQPLLDS------------------------------- 228
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
+ +N N ++T + E + ++ AF +AAERDI T D + + + ++ +
Sbjct: 229 --------FIDKKNWHNAEQTQLSQEDCVRLIAKAFASAAERDIKTKDNLEIYVLRENKV 280
Query: 252 KEYNFPLRKD 261
PLR+D
Sbjct: 281 VHKVLPLRRD 290
>gi|405946999|gb|EKC17751.1| Proteasome subunit beta type-1 [Crassostrea gigas]
Length = 128
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 80/153 (52%), Gaps = 34/153 (22%)
Query: 100 MISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLD 159
M++ +YG+RFFPYYT I+AGLD G GCVYSYDP+G+ ER GS +L+Q LLD
Sbjct: 1 MLANTLYGRRFFPYYTWNILAGLDENGVGCVYSYDPVGNYERVRVNVTGSGESLIQPLLD 60
Query: 160 NQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKA 219
NQ R+ ++K L NVD + L
Sbjct: 61 NQ------------------------FERQHQQFAAKPPPL-------NVD---LSLADT 86
Query: 220 ISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+VKDAF +A ERDIYTGD V + IT +G++
Sbjct: 87 EEIVKDAFYSAGERDIYTGDTVEVMVITGEGVR 119
>gi|119567807|gb|EAW47422.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_c [Homo sapiens]
Length = 147
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 77/126 (61%), Gaps = 16/126 (12%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT---- 67
P+Q FSPY NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K Y+ T
Sbjct: 25 PLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKC-----YKLTDKTV 79
Query: 68 -------YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
+ L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II
Sbjct: 80 IGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIG 139
Query: 121 GLDPEG 126
GLD EG
Sbjct: 140 GLDEEG 145
>gi|169806330|ref|XP_001827910.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
bieneusi H348]
gi|161779358|gb|EDQ31381.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
bieneusi H348]
Length = 276
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 46/261 (17%)
Query: 4 VTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---D 60
V +Q E ++ Y DNGGTT+ + + IIA+DTRL+A YNIYTR +K+ D
Sbjct: 59 VCEQNTENEVKEE-DLYEDNGGTTLTIKLQNKLIIAADTRLNAQYNIYTRYSTKIHKIKD 117
Query: 61 HYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
++ ++ L +Q+ +E M+ ++LA+ + ++Y RFFP Y+ +
Sbjct: 118 YFLTTVGFHADSHKIALTLDYQLKQYEQYDKMTLSALAEFLHHVLYNNRFFPLYSYCCLC 177
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR 180
G + G+ +YSYD IG ++ R GS A++Q L D S + G
Sbjct: 178 GFE-NGEATIYSYDCIGSYQKTECRVNGSGTAMIQPLFD--------------SWISG-- 220
Query: 181 THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG 240
+N EN + + E A+ +VK AF +AAE D+ TGD
Sbjct: 221 -----------------------KNFENY--SQISFEDALCLVKKAFHSAAEADVKTGDY 255
Query: 241 VHLCAITKDGIKEYNFPLRKD 261
+ + + + +++ LRKD
Sbjct: 256 LEIYILDNNKVEKEVIDLRKD 276
>gi|396081771|gb|AFN83386.1| 20S proteasome subunit beta type-1 [Encephalitozoon romaleae
SJ-2008]
Length = 289
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 118/250 (47%), Gaps = 43/250 (17%)
Query: 15 HHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTYNFLM 72
F+PY DN GT V + D+ +I DTR S+ I +RE +K+F + T +
Sbjct: 80 EKFNPYEDNSGTVVCLRQDDFIVIGGDTRHSSDMIINSREMTKIFQIGDLFLTGTGFYAD 139
Query: 73 IFTITI-LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+ + + +++ +E ++ S A ++S ++Y KRFFPYY+ +++G + G+ VY
Sbjct: 140 SHEVYVKMAYEIRQYEVEGSINVHSAANLLSKILYSKRFFPYYSYCVLSGFE-NGRPYVY 198
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
SYDP+G E GS +++Q LLD+ V SK
Sbjct: 199 SYDPVGSFESVTCICNGSGRSMIQPLLDSFV------SK--------------------- 231
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
+N N + + E + ++ AF AAAERD+ T D + + + ++ +
Sbjct: 232 ------------KNWNNAGQAQLSQEDCVRLITKAFNAAAERDVKTKDNLEVYVVRENEV 279
Query: 252 KEYNFPLRKD 261
+ FPLR+D
Sbjct: 280 ERKVFPLRRD 289
>gi|429965201|gb|ELA47198.1| hypothetical protein VCUG_01298 [Vavraia culicis 'floridensis']
Length = 242
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 45/248 (18%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPT---YNFLMIF 74
Y++N GT +A DY +IA+DTR S+ I +R+ +K+F D + + T + ++
Sbjct: 34 YANNSGTVLAFKQQDYVMIAADTRHSSVMGINSRKMTKIFEFDGFVFSGTGFYADLNEVY 93
Query: 75 TITILPFQMYLHEHNKVMSTTSLA-KMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+ Y +E + +S +LA K+++I+ +R YY ++ G D G +YS+
Sbjct: 94 FRLRYEVEKYENEIERRISIRALAHKLLNILYSRRRGLIYYVFCVLIGKDETGDPVLYSF 153
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
DPIG E+ R GS+ ++Q LLD+ I++H
Sbjct: 154 DPIGSYEQTMCRCYGSASPMIQPLLDST--IMKH-------------------------- 185
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
NQENV + +E+++ + K AF AAAERD+ TGD + + KDG+ E
Sbjct: 186 -----------NQENVSYQSLSVEESVELTKKAFFAAAERDVNTGDYLQIVVYKKDGMTE 234
Query: 254 YNFPLRKD 261
LRKD
Sbjct: 235 ELVDLRKD 242
>gi|414886160|tpg|DAA62174.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 152
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 30/135 (22%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL 79
Y +NGGT VA+AG DY ++A+DTRLS GY+I TR+ SK+ D + +L
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICD------------LADKCVL 56
Query: 80 P---FQ---------------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
FQ +Y H+HNK MS ++A+++S +Y KRFFPYY ++ G
Sbjct: 57 ASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGG 116
Query: 122 LDPEGKGCVYSYDPI 136
LD EGK C +++ +
Sbjct: 117 LDSEGKVCCFTFSHL 131
>gi|345801204|ref|XP_003434786.1| PREDICTED: proteasome subunit beta type-1-like [Canis lupus
familiaris]
Length = 112
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 39/136 (28%)
Query: 126 GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
G VYS+ P+G +R +F+AGGS+ A+LQ LLDNQVG
Sbjct: 9 GNMAVYSFGPVGSYQRDSFKAGGSASAMLQLLLDNQVG---------------------- 46
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
F+N +NV+ + L++A+ +VKD F +AAERD+YTGD + +C
Sbjct: 47 -----------------FKNMQNVEHVLLSLDRAMRLVKDVFISAAERDVYTGDVLRICI 89
Query: 246 ITKDGIKEYNFPLRKD 261
+TK+GI+E PLRKD
Sbjct: 90 VTKEGIREETVPLRKD 105
>gi|359473811|ref|XP_002264176.2| PREDICTED: proteasome subunit beta type-1-like [Vitis vinifera]
Length = 149
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
T Q ++S Y++NGG+ VA+AG DY +I S TR+S GYNI T + SK+ +
Sbjct: 2 TKQQANWSLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKIC-----KLADKC 56
Query: 71 LMI---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
+M F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY+ ++
Sbjct: 57 VMASSGFQADVRALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVL 116
Query: 120 AGLDPEGKGCVYSYDPI 136
GLD EGKG + +D +
Sbjct: 117 GGLDNEGKGWRWRFDIV 133
>gi|440491899|gb|ELQ74504.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
[Trachipleistophora hominis]
Length = 243
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 45/248 (18%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPT---YNFLMIF 74
Y++N GT +A DY IIA+DTR S+ I +R+ +K+F D + + T + ++
Sbjct: 35 YANNSGTVLAFKQQDYVIIAADTRHSSEMGINSRKMTKIFEFDGFIFSGTGFYADLNEVY 94
Query: 75 TITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRF-FPYYTSTIIAGLDPEGKGCVYSY 133
+ Y +E K + ++LA + ++Y +R YY +++ G D G+ +YS+
Sbjct: 95 FRLRYEVERYENEVEKRIGISALAHKLLNILYSRRGGLIYYVFSVLVGKDETGEPVLYSF 154
Query: 134 DPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
DPIG E+ + GS+ ++Q LLD+ + MK
Sbjct: 155 DPIGSYEQVMCKCYGSASPMIQPLLDSTI---------MKY------------------- 186
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
NQEN + +E+++ + K AF AAAERD+ TGD + + +DG+ E
Sbjct: 187 -----------NQENASYQSLCMEESVELTKKAFFAAAERDVNTGDYLQIVVYKRDGVNE 235
Query: 254 YNFPLRKD 261
LRKD
Sbjct: 236 ELVDLRKD 243
>gi|83314992|ref|XP_730601.1| proteasome subunit beta type 1 [Plasmodium yoelii yoelii 17XNL]
gi|23490372|gb|EAA22166.1| proteasome subunit beta type 1-related [Plasmodium yoelii yoelii]
Length = 214
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 111/258 (43%), Gaps = 69/258 (26%)
Query: 10 ETPIQH-----HFSPYSDNGGTTVAVAG-PDYAIIASDTRLSAGYNIYTREQSKLFDHYY 63
E I+H ++PY DNGG ++ D II S S +++ Q K+
Sbjct: 20 EAAIEHARPSKRWNPYIDNGGNCPKISKITDKCIIGSSGMQSDIKTLHSLLQKKI----- 74
Query: 64 YRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
Q++ EH+ S +AK++ + +Y +RFFPYYT I+AG+D
Sbjct: 75 ------------------QLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYYTFNILAGID 116
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHD 183
+GKG +YSYD IG + GS +L+ +LDN+V + K+ L I+ D
Sbjct: 117 EDGKGVLYSYDAIGSYYMSTHACTGSGSSLILPILDNRV--------EQKNQL--IKNID 166
Query: 184 LALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHL 243
L +IN VKDA T+A ERDIYTGD +
Sbjct: 167 FNLRDDIN------------------------------FVKDAMTSATERDIYTGDQAEI 196
Query: 244 CAITKDGIKEYNFPLRKD 261
I GI L+KD
Sbjct: 197 YIIDNLGINTTLLDLKKD 214
>gi|224007805|ref|XP_002292862.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
pseudonana CCMP1335]
gi|220971724|gb|EED90058.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
pseudonana CCMP1335]
Length = 219
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 111/260 (42%), Gaps = 64/260 (24%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLS-AGYNIYTREQSKLFDHYYYRPTYNFLMIF 74
F PY NGG AVAG DY IIASDTRL+ GY I +R +L + T +MI
Sbjct: 1 KFDPYQLNGGLVAAVAGKDYVIIASDTRLTDGGYGINSRRNIQL------QQTNLPVMIG 54
Query: 75 TITILPFQMYLHEHNKV-------------MSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+ L ++ M S+A ++ ++YG+R FP+Y+ ++AG
Sbjct: 55 SAGCASDCESLKRRVRLELDSLECNFPSGKMGVQSVANLLQQVLYGRRGFPFYSFCVVAG 114
Query: 122 LDPE--------GKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMK 173
+D + G G VY YD IG ER + G+ LLQ +LD
Sbjct: 115 IDRDEQTGDSKCGMGAVYVYDAIGSFERVAVGSAGTGRELLQPILDR------------- 161
Query: 174 SVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAER 233
+G I+ ++ N + L E+A++ V A+ + AER
Sbjct: 162 --MGSIKQNN-------NVIQDGL--------------AQCTWEEAVNNVARAYQSVAER 198
Query: 234 DIYTGDGVHLCAITKDGIKE 253
+I GD V +C + G E
Sbjct: 199 EISVGDEVVICVVKASGSTE 218
>gi|358253687|dbj|GAA53599.1| 20S proteasome subunit beta 6, partial [Clonorchis sinensis]
Length = 156
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Query: 73 IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
+ T+T L + Y ++H K +ST + A ++S+ +Y +RFFP+Y S+I+ GLD EG+G
Sbjct: 15 VLTLTKLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVSSILGGLDEEGRGA 74
Query: 130 VYSYDPIGHTERANFRAGGSSGALLQALLDNQV 162
VY YDP+G ER A GSSG +LQ LD+++
Sbjct: 75 VYRYDPVGSFERVKCAAAGSSGVILQPFLDHRL 107
>gi|296088721|emb|CBI38171.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 76/128 (59%), Gaps = 16/128 (12%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
Q ++S Y++NGG+ VA+AG DY +I S TR+S GYNI T + SK+ + +M
Sbjct: 93 QANWSLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKIC-----KLADKCVMA 147
Query: 74 ---FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
F + Q +Y H+HNK MS ++A+++S +Y KRFFPYY+ ++ GL
Sbjct: 148 SSGFQADVRALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGL 207
Query: 123 DPEGKGCV 130
D EGKG V
Sbjct: 208 DNEGKGWV 215
>gi|388507486|gb|AFK41809.1| unknown [Medicago truncatula]
Length = 158
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 71/121 (58%), Gaps = 17/121 (14%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPTYN 69
QH ++SPY +NGG+ VA+AG DY +IA+DTR+S GYNI TR+ SK L + P+
Sbjct: 4 QHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMAPSG- 62
Query: 70 FLMIFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
F + Q Y H+HNK MS ++A+++S +Y KRFFPYY+S
Sbjct: 63 ----FQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSSMCWVA 118
Query: 122 L 122
L
Sbjct: 119 L 119
>gi|195421055|ref|XP_002060834.1| GK20619 [Drosophila willistoni]
gi|194156919|gb|EDW71820.1| GK20619 [Drosophila willistoni]
Length = 229
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 54/252 (21%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIY-TREQSKLFDHY---------YYRP 66
F+P+ GGT VA+AG D+A IA DTRL+ +NI R QSKLFD +
Sbjct: 21 FNPHEYIGGTLVAIAGNDFATIACDTRLTNDFNIRKMRSQSKLFDVSPQTVLGSVGCWCD 80
Query: 67 TYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
T L + L +++ ++ + SLA M++ + ++ Y+ S+++AG+D G
Sbjct: 81 TLALLSLVRSYSLKYEL---DNLMPVCPDSLASMLTRTKFTRQ---YFVSSVVAGIDSNG 134
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
G VY DP G+ R + G+ G ++ LD G + QM
Sbjct: 135 LGAVYFNDPSGNYLRLPYHISGTGGRIILPTLDWFEG---NEEDQM-------------- 177
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
NA+++ LT+ +KA+ + +AF A +RDI+ G+ + + I
Sbjct: 178 ----NAITTSLTV-----------------DKAVEISMEAFRTARDRDIFIGNCMFINII 216
Query: 247 TKDGIKEYNFPL 258
T++G++ PL
Sbjct: 217 TREGVQFKQLPL 228
>gi|160331789|ref|XP_001712601.1| prsB6 [Hemiselmis andersenii]
gi|159766050|gb|ABW98276.1| prsB6 [Hemiselmis andersenii]
Length = 251
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 52/254 (20%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---------LFDHYYYRPT 67
F+ Y +NGGT + ++ ++++IASDTR S G + TR ++ L Y
Sbjct: 41 FNFYQNNGGTVLGISTKNFSLIASDTRFSFGMALPTRTTTRIIKISSNIILASAGMYSDI 100
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ + I I F+ E+ + +S A +S ++Y KRFFPYY+ ++AGL+ +
Sbjct: 101 FFLQNLIQIGIKKFKT---ENLEKCLISSCAFYLSYILYSKRFFPYYSFNLLAGLEKNRE 157
Query: 128 GCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
G ++ +D IG E+ + G+ + +Q +LD GI Q S +K
Sbjct: 158 GSIFCFDAIGSFEKTSISCVGNGQSQIQPILD---GIFQKKSLLVKK------------- 201
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
LL +N +K F A+R+I GDG+ + +T
Sbjct: 202 --------DFQTLLSVKN----------------CIKGIFLKVAQRNISIGDGLQMFIVT 237
Query: 248 KDGIKEYNFPLRKD 261
K GI N L+ D
Sbjct: 238 KKGIFIENHFLKLD 251
>gi|195046971|ref|XP_001992246.1| GH24307 [Drosophila grimshawi]
gi|193893087|gb|EDV91953.1| GH24307 [Drosophila grimshawi]
Length = 285
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 7/147 (4%)
Query: 25 GTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTITIL-- 79
G+ + + G D+ +IASD RL +I R+ KLF N+ + +T L
Sbjct: 82 GSIIFIEGRDFVVIASDNRLITKLDIL-RKHFKLFPMTPQSIIGSIGNWGDVVAMTALIR 140
Query: 80 -PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGH 138
Q+Y ++ K +ST +LA MIS +MY +R FP TI+AGLD EGKG V+ +D IG+
Sbjct: 141 RRVQVYEQDNKKTISTEALASMISTLMYNRRLFPCLMITILAGLDNEGKGAVFHFDEIGN 200
Query: 139 TERANFRAGGSSGALLQALLDNQVGII 165
ER + G + ++ A L + +G I
Sbjct: 201 RERCRYLIIGGARDIMLAKLRHSIGEI 227
>gi|355714010|gb|AES04859.1| proteasome subunit, beta type, 1 [Mustela putorius furo]
Length = 76
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 39/115 (33%)
Query: 146 AGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRN 205
AGGS+ A+LQ LLDNQVG F+N
Sbjct: 1 AGGSASAMLQPLLDNQVG---------------------------------------FKN 21
Query: 206 QENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI+E PLRK
Sbjct: 22 TQNVEHVPLSLDRAMRLVKDVFVSAAERDVYTGDALRICIVTKEGIREETVPLRK 76
>gi|340507845|gb|EGR33723.1| proteasome subunit beta type 1, putative [Ichthyophthirius
multifiliis]
Length = 203
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 21/165 (12%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YN 69
F+PY N GT A+ G + I+A DTRLS GY+I +RE SKL D+ Y + +
Sbjct: 34 QFNPYVFNAGTVCAIGGKGFVIVAGDTRLSQGYSIISRENSKLCKLSDNVYLATSGMYAD 93
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGK---------------RFFPYY 114
F+ + QMY + + K S +++ ++S +Y K RFFPYY
Sbjct: 94 FVALSKQLQSRLQMYQYNNQKQASMKAISTLLSRTLYYKRYIYFIINFINKYIYRFFPYY 153
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLD 159
T ++AG D +G G V YD +G + + GS L+ + D
Sbjct: 154 TFNLLAGFDNQGNGQVIGYDAVGSGDFKQYAVLGSGAQLIVPIFD 198
>gi|393228712|gb|EJD36350.1| N-terminal nucleophile aminohydrolase [Auricularia delicata
TFB-10046 SS5]
Length = 193
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 47/170 (27%)
Query: 81 FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTE 140
+ Y H H+K M S+A+MI M+Y I+ G+D +G G VYS+DP+G E
Sbjct: 35 LEWYRHAHSKDMPLQSIARMIQTMLY--------VYNILGGIDEQGVGAVYSFDPVGSYE 86
Query: 141 RANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTIL 200
R RA G++ +L+Q LDNQ+
Sbjct: 87 RETCRAAGAAQSLVQPFLDNQI-------------------------------------- 108
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
F+NQ+ +PL+ +S+V DAFT ER I GDG+ + I G
Sbjct: 109 -YFKNQQGDHPAHLPLDHVLSLVTDAFTGTTERHIEVGDGLQMFVILARG 157
>gi|255965748|gb|ACU45169.1| proteasome subunit beta type 1 [Prorocentrum minimum]
Length = 123
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 42/164 (25%)
Query: 99 KMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALL 158
+++S M+YGKRFFPYYT ++ G+D EGKG VY YD IG ER + GS +L+ ++L
Sbjct: 1 QLLSTMLYGKRFFPYYTFNVLVGIDDEGKGAVYHYDAIGSFERVPYTTSGSGSSLVMSVL 60
Query: 159 DNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPV-PLE 217
D Q IQ ++ + +TPV +
Sbjct: 61 DAQ---IQKGNQTI--------------------------------------ETPVLTKD 79
Query: 218 KAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
K + + D ++ ERDI+TGD + I G+ + F L+ D
Sbjct: 80 KIVDLSMDVLSSVGERDIHTGDAGEIFVIDAAGVHKTKFELKLD 123
>gi|440293947|gb|ELP86994.1| proteasome subunit beta type 1, putative, partial [Entamoeba
invadens IP1]
Length = 173
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 50/175 (28%)
Query: 84 YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERAN 143
Y +E+NK MST ++A+++S +Y RFFPYY+ +I+ GL +G+ +Y+YD +G +
Sbjct: 41 YRYENNKEMSTEAIAQLLSNTLYSHRFFPYYSFSILTGLSVKGEPLIYNYDAVGSFQEVA 100
Query: 144 FRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGF 203
+ GS L LLD AL ++
Sbjct: 101 YTCSGSGEELAYPLLD-------------------------ALLKQ-------------- 121
Query: 204 RNQENVDKTPVPLEK-AISVVKDAFTAAAERDIYTGDGVHLCAITKDGI---KEY 254
+T V LEK +++ +D T+A ERDI+TGD V L + K+GI KEY
Sbjct: 122 -------RTEVLLEKEGVNIARDVMTSACERDIHTGDDVELYVLNKNGITYTKEY 169
>gi|195440110|ref|XP_002067892.1| GK22295 [Drosophila willistoni]
gi|194163977|gb|EDW78878.1| GK22295 [Drosophila willistoni]
Length = 212
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 54/252 (21%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIY-TREQSKLFDHY---------YYRP 66
F+P+ GGT VA+AG D+A IA DTRL+ +NI R QSKLFD +
Sbjct: 4 FNPHEYIGGTLVAIAGNDFATIACDTRLTNDFNIRKMRSQSKLFDVSPQTVLGSVGCWCD 63
Query: 67 TYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
T L + L +++ ++ + SLA M++ ++ Y+ ST++ G+D G
Sbjct: 64 TLALLSLVRSFSLKYEL---DNLMPVCPDSLASMLTRTKLTRQ---YFVSTVVTGIDSNG 117
Query: 127 KGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
G VY DPIG+ R + G+ G ++ L+ G H
Sbjct: 118 LGAVYFNDPIGNYLRLPYHISGTGGRIILPTLN--------------WFEGNEEDH---- 159
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
+NA+++ LT+ +K + + +AF AA + D +TG+ + + I
Sbjct: 160 ---MNAITTSLTV-----------------DKTVQISMEAFRAARDCDSFTGNCMFINII 199
Query: 247 TKDGIKEYNFPL 258
T++G++ PL
Sbjct: 200 TREGVQFKQLPL 211
>gi|162606130|ref|XP_001713580.1| 26S proteasome SU B6 [Guillardia theta]
gi|13794500|gb|AAK39875.1|AF165818_83 26S proteasome SU B6 [Guillardia theta]
Length = 239
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL 71
+ +F PY +NGG +A+ G + ++ASDTR+S GY+I +R ++ +
Sbjct: 25 SLNRNFDPYQNNGGLVLAITGNKFCVMASDTRISMGYSIPSRLNLRILKISNLCLLGSSG 84
Query: 72 MIFTITILPFQM--------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
MI I IL ++ YL+ N ++ + + S ++Y +RFFP+YT I+ G++
Sbjct: 85 MISDINILHQKLRNEIFRLKYLN--NTELNLNGIVYLTSSLLYSRRFFPFYTFNILTGIN 142
Query: 124 PEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLD 159
GK Y+YD IG + + G+ + Q ++D
Sbjct: 143 ELGKASNYTYDAIGSFDCNHASTVGNCQSSAQCIMD 178
>gi|68470996|ref|XP_720505.1| hypothetical protein CaO19.2755 [Candida albicans SC5314]
gi|68471452|ref|XP_720274.1| hypothetical protein CaO19.10269 [Candida albicans SC5314]
gi|46442133|gb|EAL01425.1| hypothetical protein CaO19.10269 [Candida albicans SC5314]
gi|46442375|gb|EAL01665.1| hypothetical protein CaO19.2755 [Candida albicans SC5314]
Length = 127
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 5 TKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---- 60
+ +I PI+H F+PYSDNGGT + +AG D+A++A DTR GY+I +R +SK+ D
Sbjct: 13 SSEIQTVPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDD 72
Query: 61 -----HYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFP 112
+ + + F +++ ++ + K ++ S A+ I ++YGKRFFP
Sbjct: 73 ILMTANGFAADGVALIDRFKQSLIWYK--FDNNGKKLAIKSAARYIQQLLYGKRFFP 127
>gi|149463382|ref|XP_001520474.1| PREDICTED: proteasome subunit beta type-1-like [Ornithorhynchus
anatinus]
Length = 66
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 46/61 (75%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N +NV+ P+ L KA+ +VKD F +AAERD+YTGD + +C +TKDGI+E LR+
Sbjct: 6 IGFKNMQNVEHVPLTLGKALQLVKDVFISAAERDVYTGDALKICIVTKDGIQEETISLRR 65
Query: 261 D 261
D
Sbjct: 66 D 66
>gi|219123814|ref|XP_002182212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406173|gb|EEC46113.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 231
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 110/247 (44%), Gaps = 46/247 (18%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRL--SAGYNIYTREQSK--------LFDH----Y 62
F PY NGG AVAG D+ ++++DTRL +GY+I R K L H
Sbjct: 9 FEPYQLNGGLVAAVAGRDFVVLSTDTRLMGPSGYDILERNHVKIETTNSGELIVHASTKL 68
Query: 63 YYRPTY--------NFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYY 114
Y PT+ + M+ + + + T ++A ++ M+Y +R FP+Y
Sbjct: 69 VYAPTFVGSSGCNADCEMLKRTVRADTRAAFYHGESDIQTAAVATLLGQMLYSRRGFPFY 128
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKS 174
+ ++ G++ G G VY YD IG E+ G+ LLQ +LD
Sbjct: 129 SFCVVGGME-NGAGKVYVYDAIGSYEQVGVATSGTGRELLQPILDRS------------- 174
Query: 175 VLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERD 234
R+ ++ + + L ++ + + R Q + K ++AIS + D + + +ERD
Sbjct: 175 ----FRSREVFRSTIESELPKQVMLPVAPR-QVDCSK-----DEAISKLVDGYRSVSERD 224
Query: 235 IYTGDGV 241
I GD V
Sbjct: 225 IGVGDRV 231
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 56/239 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL 79
G TTV + D ++A+D R S G + ++E +K+F DH + I ++ L
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSKEVTKVFQIDDHLALAGAGSVGDILSLVRL 65
Query: 80 ---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y + + +S +LA + S +++G RF PY+ +IAG D K +YS D
Sbjct: 66 LRAEVKLYRAKVGREISVKALATLTSNILHGSRFMPYFGWFLIAGYDE--KPALYSLDMA 123
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G F A GS L A+L++
Sbjct: 124 GGVTEDKFTAAGSGMELAFAVLED------------------------------------ 147
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
G+++ NV E+ + + A A RD++TGDG+ L +T++G +E N
Sbjct: 148 -----GYKDDINV-------EEGVKLALKAIKIATRRDVFTGDGITLVTVTEEGYRELN 194
>gi|241742039|ref|XP_002414154.1| proteasome, subunit beta, putative [Ixodes scapularis]
gi|215508008|gb|EEC17462.1| proteasome, subunit beta, putative [Ixodes scapularis]
Length = 80
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 199 ILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPL 258
+++GF+NQ P E+AIS++KD F +AAERDIYTGD V + I KDG+ E FPL
Sbjct: 18 LIIGFKNQVGAVAVPPTRERAISIIKDVFISAAERDIYTGDSVIVNIIDKDGVHEERFPL 77
Query: 259 RKD 261
R+D
Sbjct: 78 RRD 80
>gi|323448836|gb|EGB04730.1| hypothetical protein AURANDRAFT_32152 [Aureococcus anophagefferens]
Length = 219
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR--EQSKLFDHYYYRPTYNFLMIF 74
F PY++NGG+ A +G D+ ++A+D++L G I + E++ + T +
Sbjct: 12 FRPYTNNGGSLAAASGHDFTLLAADSQLVHGMTIASTVFERTSALGNLAALGTSGCVADC 71
Query: 75 TITILPFQM----YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
+M Y M + A++ S MMY +R FPYY S ++ GLD G G V
Sbjct: 72 DSLSHDLRMEAERYFWGAEMSMEASVAAQVCSQMMYARRAFPYYASLLLCGLDRFGTGRV 131
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDN 160
+D G A GS+ +LQA+LD
Sbjct: 132 CVFDSFGSITEGQMVAVGSAQGVLQAVLDR 161
>gi|195064491|ref|XP_001996575.1| GH21877 [Drosophila grimshawi]
gi|193895395|gb|EDV94261.1| GH21877 [Drosophila grimshawi]
Length = 223
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 52/241 (21%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGY-NIY--TREQSK-LFDHYYYRPTYNFLMIFTITI 78
N GT +A+ G D+A+IASD +++ N++ TR+ + + N L+
Sbjct: 31 NFGTILAIGGVDFAVIASDYCMTSDLDNLFPMTRQSVMGCIGSWVDVASMNALIKRR--- 87
Query: 79 LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGH 138
QM ++ + T LA +IS + +R FP+ TSTI+AGLD GKG VY Y+ +G
Sbjct: 88 --GQMRELDNRSKLPTEILASIISSTINSRRLFPWRTSTILAGLDVMGKGAVYQYNDVGQ 145
Query: 139 TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLT 198
R + GS+ ++ L++ +G QH K
Sbjct: 146 RGRFLYSVLGSARNIMWPQLNHVIGKPQHYPLLTK------------------------- 180
Query: 199 ILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPL 258
E+A +V+D F A+ GD + ITKD I+E + L
Sbjct: 181 ------------------ERAFDLVRDCFMDASRVHTVIGDTALIKIITKDLIEEQSLKL 222
Query: 259 R 259
R
Sbjct: 223 R 223
>gi|240103778|ref|YP_002960087.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595756|sp|C5A7L1.1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 201
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 102/248 (41%), Gaps = 56/248 (22%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRP---TYNFL 71
SP + G TTV V D ++A+D R + G + ++E +K+F DH + L
Sbjct: 4 SPSAMKGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQIDDHLAIAGAGLVGDIL 63
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+ + ++Y + + MS +LA ++S +++G R PY+ +I G D + + +Y
Sbjct: 64 SLVRLLRAEAKLYRAKVGREMSVKALATLVSNVLHGSRHLPYFAWFLIGGYDVKPR--LY 121
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
S D G F A GS ALL
Sbjct: 122 SIDAAGGVTEERFIAAGSGMEFALALL--------------------------------- 148
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
+EN + L++ I + A AA RD+YTG+GV + AITK+G
Sbjct: 149 --------------EENFSD-GMGLDEGIDLAVRAVKAAIRRDVYTGEGVTVVAITKEGY 193
Query: 252 KEYNFPLR 259
+E L+
Sbjct: 194 RELEPVLK 201
>gi|195022115|ref|XP_001985520.1| GH17107 [Drosophila grimshawi]
gi|193899002|gb|EDV97868.1| GH17107 [Drosophila grimshawi]
Length = 254
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 52/241 (21%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGY-NIY--TREQSK-LFDHYYYRPTYNFLMIFTITI 78
N GT +A+ G D+A+IASD +++ N++ TR+ + + N L+
Sbjct: 62 NFGTILAIGGADFALIASDYCMTSELDNLFPMTRQSVMGCIGSWVDVASMNALIKRR--- 118
Query: 79 LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGH 138
QM ++ + T LA +IS + +R FP+ TSTI+AGLD GKG VY Y+ +G
Sbjct: 119 --GQMRELDNRSKLPTEILASIISGTINSRRLFPWRTSTILAGLDVMGKGAVYQYNDVGQ 176
Query: 139 TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLT 198
R + GS+ ++ L++ +G QH K
Sbjct: 177 RGRFLYSVLGSARNIMWPQLNHVIGKPQHYPLLTK------------------------- 211
Query: 199 ILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPL 258
E+A +V+D F A+ GD + ITKD I+E + L
Sbjct: 212 ------------------ERAFDLVRDCFMDASRVHTVIGDTALIKIITKDLIEEQSLKL 253
Query: 259 R 259
R
Sbjct: 254 R 254
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 56/239 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL 79
G TTV + D ++A+D R S G + + +K+F DH + I ++ L
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 80 ---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y K MS +LA + S +++G RF PY+ +IAG D K +YS D
Sbjct: 66 LRAEAKLYRARVGKEMSVKALATLTSNVLHGNRFMPYFGWFLIAGHDE--KPGLYSIDMA 123
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G F A GS +
Sbjct: 124 GGVTEDKFTAAGS------------------------------------------GMEFA 141
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
+IL +EN + +PLE + + A AA RD++TG GV L +T++G +E++
Sbjct: 142 FSIL-----EENY-REDMPLEGGVKLALRAIKAATRRDVFTGGGVTLVTVTREGYREWS 194
>gi|345320946|ref|XP_003430367.1| PREDICTED: proteasome subunit beta type-1-like, partial
[Ornithorhynchus anatinus]
Length = 72
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 42/58 (72%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPL 258
+GF+N +NV+ P+ L KA+ +VKD F +AAERD+YTGD + +C +TKD I+E L
Sbjct: 10 IGFKNMQNVEHVPLTLGKALQLVKDVFISAAERDVYTGDALKICIVTKDCIQEETISL 67
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 55/242 (22%)
Query: 25 GTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT-ILP 80
GTTV + D ++A++ R+S G + ++ K++ D + T+ I+
Sbjct: 6 GTTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVE 65
Query: 81 FQMYLHEHNKVMS--TTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGH 138
+M L+E + +S ++AK++S ++Y +R FPYY ++ GLD EG +YS DPIG
Sbjct: 66 AEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGS-HLYSLDPIGA 124
Query: 139 TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLT 198
++ A GS L + I++ + K+
Sbjct: 125 IIEDDYVALGSGTQL-------AISIVESNYKK--------------------------- 150
Query: 199 ILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPL 258
+ L++A+S+ + AA +RD +GDGV + I K G E +PL
Sbjct: 151 --------------DMSLDEALSLALKSVYAAMKRDAASGDGVDVLVIGKSGTLEKTYPL 196
Query: 259 RK 260
+
Sbjct: 197 SE 198
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 56/237 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL 79
G TTV + D ++A+D R S G + ++ SK+F DH + I ++ L
Sbjct: 5 KGTTTVGIVCKDGVVLAADMRASLGNMVLSKGVSKIFQIDDHLALAGAGSVGDILSLVRL 64
Query: 80 ---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y + MST +LA + S ++ G+R+FPY+ ++AG D K +YS D
Sbjct: 65 LRAEAKLYRARVGREMSTKALATLTSNILSGRRYFPYFGWFLVAGYDE--KPGLYSIDMA 122
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G + + GS ++LDN+
Sbjct: 123 GGITEDKYVSAGSGMEFAYSVLDNE----------------------------------- 147
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
+ + NV +K + + A A +RD++TGDG+ + ITK+G E
Sbjct: 148 ------YDEKMNV-------KKGVKLAIKAINTAIKRDVFTGDGIMVVVITKEGYSE 191
>gi|449522153|ref|XP_004168092.1| PREDICTED: proteasome subunit beta type-1-like [Cucumis sativus]
Length = 66
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF 70
T Q ++SPY +NGG+ VA+AG DY +IA+DTRLS GYNI TR+ SK+ Y + NF
Sbjct: 2 TKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICK-LYVNLSSNF 60
Query: 71 LMIFTI 76
+F I
Sbjct: 61 NFLFGI 66
>gi|350525853|ref|YP_002582771.2| proteasome subunit beta [Thermococcus sp. AM4]
gi|345650672|gb|EEB74119.2| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 194
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 56/237 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRP---TYNFLMIFTI 76
G TTV V D ++A+D R + G + ++E +K+F DH + L + +
Sbjct: 2 KGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQVDDHLAIAGAGLVGDILSLVRL 61
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y + MS ++A ++S +++G R+ PY+ +I G D + +YS D
Sbjct: 62 LRAEAKLYRARVGREMSVKAMATLVSNVLHGSRYLPYFAWFLIGGYDVRPR--LYSIDAA 119
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G F A GS ALL
Sbjct: 120 GGVTEERFIAAGSGMEFALALL-------------------------------------- 141
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
+EN + LE+ + + A AA RD+YTG+GV + ITK+G +E
Sbjct: 142 ---------EENFSD-GMDLEEGVDLAVRAVKAAMRRDVYTGEGVTVVTITKEGYRE 188
>gi|323448817|gb|EGB04711.1| hypothetical protein AURANDRAFT_55099 [Aureococcus anophagefferens]
Length = 274
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 8 ILETPIQHH--FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYR 65
+L P H F PY++NGG+ A G +A+IA+D++ G I S +FD
Sbjct: 40 VLALPRNAHGKFRPYANNGGSLAAACGHGFALIAADSQFLHGMMI----TSSVFDRVV-- 93
Query: 66 PTYNFLMIFTITILP------------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPY 113
P + +++ T + Y+ M + A++ S MY +R FP+
Sbjct: 94 PLSDVVLMGTSGCAADCESMTHDVRTEAERYIVGAKLSMDASVAAQLCSGAMYARRGFPH 153
Query: 114 YTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDN 160
+ S ++ GLD G G V+ +D IG GS+ +LQ++LD
Sbjct: 154 HMSLVVCGLDSVGFGRVFVFDSIGSLMEGPTVTAGSAREVLQSVLDG 200
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 55/236 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLM----IFTIT 77
G T V + D ++A++ R+S G+ + K+F D + + + I
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
L + Y E + ST S+A+++S++M+ +RF P++ ++ G+D EG + DP+G
Sbjct: 68 KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGIDEEGPHLIV-MDPLG 126
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
N+ A G+ L A+LD
Sbjct: 127 SLIEDNYAALGTGAKLAVAVLDT------------------------------------- 149
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
G+R + +E+A + A AA ERD +G G+ L + K+G +E
Sbjct: 150 ----GYRPD-------ITVEEAKKLAVQALKAAIERDPVSGGGIDLAIVDKNGARE 194
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 56/237 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL 79
G TTV + D ++A+D R S G IY R +K+ +H + I + L
Sbjct: 9 KGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRL 68
Query: 80 ---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y + K MS +LA +++ +M G ++FPY ++ G D + K +YS D +
Sbjct: 69 LRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEKPK--LYSVDMV 126
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G + GS ++LD++
Sbjct: 127 GGITEDKYATAGSGMEFAYSILDSEY---------------------------------- 152
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
K + LE+ I + A A +RD+++GDG+ + ITK+G KE
Sbjct: 153 --------------KDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITKEGYKE 195
>gi|355714007|gb|AES04858.1| proteasome subunit, beta type, 1 [Mustela putorius furo]
Length = 100
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF 59
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS GY+I+TR+ K +
Sbjct: 25 PVQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSIHTRDSPKCY 72
>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
Length = 203
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 97/239 (40%), Gaps = 56/239 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL 79
G TTV + D ++A+D R S G + + +K+F DH + I ++ L
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 80 ---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y + K MS +LA + S +++G RF PY+ +IAG G+ +YS D
Sbjct: 66 LRAEAKLYRAKVGKEMSVKALATLTSNVLHGSRFMPYFGWFLIAG--HTGEPGLYSVDMA 123
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G F A GS ++L+ +
Sbjct: 124 GGVTEDRFTAAGSGMEFAFSILEAEF---------------------------------- 149
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
+EN + LE+ + + A AA RD++TG GV L +T +G KE++
Sbjct: 150 ---------KEN-----MTLEEGVKLALRAIKAATRRDVFTGGGVTLVTVTDEGYKEWS 194
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 66/245 (26%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
G TT+ + D I+A+D R S G I + K+ Y+ N + ++ Q
Sbjct: 4 KGTTTIGLICKDAVILAADKRASLGNLIADKNAKKI-----YKIDDNLALTIAGSVGDAQ 58
Query: 83 -----------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+Y K+MS + ++S +++ R+FP+ I+ G D +G +Y
Sbjct: 59 SLVRYLTAEAKLYRMRTGKLMSPLACTTLLSNILHSSRYFPFLVQMIVGGFDEKGFK-LY 117
Query: 132 SYDPIGHT-ERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
S DP+G E +F A GS + +L+
Sbjct: 118 SLDPLGGVNEEKDFTATGSGSPIAYGVLEA------------------------------ 147
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
G+ K + +K +S+V A AA ERD ++G+GV L ITKDG
Sbjct: 148 -----------GY-------KKDMDYKKGVSLVLKALQAAMERDTFSGNGVSLALITKDG 189
Query: 251 IKEYN 255
+K Y
Sbjct: 190 VKIYE 194
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 55/236 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV + D I+A+D R S G + +E KL+ D Y + I +
Sbjct: 6 GTTTVGLICDDAVILATDKRASMGNLVADKEAKKLYKIDDYIALTIAGSVGDAQAIVRLL 65
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI- 136
++Y K +S + A ++S +++ R+FP+ T II G D ++S DP+
Sbjct: 66 TAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQLIIGGYDLLEGAKLFSLDPLG 125
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G E F A GS + +L+
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVLEA------------------------------------ 149
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
G+ +P+E+ I + A +A ERD Y+G+G+ L ITK+G+K
Sbjct: 150 -----GYDRD-------MPVEEGIKLALKALKSAMERDTYSGNGISLAVITKEGVK 193
>gi|406868327|gb|EKD21364.1| proteasome subunit beta type-3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 212
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 103/251 (41%), Gaps = 55/251 (21%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFT 75
SP+S NGG VA+ G D IA D RL + K+F + Y T + T
Sbjct: 10 SPFSINGGACVAMVGKDCVAIACDLRLGLQSLTVSNNFPKIFSYGDVYLGLTGLATDVST 69
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
++ L MY + +S +++A ++S +Y KRF PY+ S ++AG+D + GK +
Sbjct: 70 VSDLFRYKVNMYRLREERNISPSTMANLVSSSLYEKRFGPYFVSPVVAGIDQKSGKPFIC 129
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
+D IG + A +F GG+ +S Q+ G+ DLA
Sbjct: 130 GFDSIGCIDFAKDFIVGGT------------------ASDQLFGTCEGLWEPDLA----- 166
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
P L + IS A A +RD +G G H+ I KD
Sbjct: 167 ----------------------PEDLFETIS---QALLNAVDRDALSGWGAHVYIIEKDK 201
Query: 251 IKEYNFPLRKD 261
+ + R+D
Sbjct: 202 VTKRLLKGRQD 212
>gi|329764912|ref|ZP_08256501.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795409|ref|ZP_10378773.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
gi|329138581|gb|EGG42828.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 195
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 97/238 (40%), Gaps = 56/238 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQM 83
G T V + D ++AS+ R++ G + ++ K F ++ + IL Q+
Sbjct: 5 GATAVGITFQDGIVLASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILTLQI 64
Query: 84 YL------HEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
E + + ++AKM+S MMY +R+FP T I+ G+ K +++ DP+G
Sbjct: 65 AALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGI--IDKPILFTLDPLG 122
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+ A G+ + +LD Q
Sbjct: 123 SVLPDEYAAVGTGAEMALGVLDPQF----------------------------------- 147
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
+ N+ + E+AI + K A +AA RD +GDG+ + ITKDGIKEY
Sbjct: 148 --------KPNMTQ-----EEAIDLAKRAVRSAALRDSASGDGLDVLVITKDGIKEYT 192
>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 56/237 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL- 79
G TTV + + ++A+DTR S G IY + +K+ +H + I + L
Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69
Query: 80 --PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+Y K MS +LA +++ ++ G ++FPY ++ G D + + ++S D +G
Sbjct: 70 KAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEKPR--LFSVDMVG 127
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
N+ A GS ++LD++
Sbjct: 128 GITEDNYAAAGSGMEFAYSILDSE------------------------------------ 151
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEY 254
+R + +V+ KAI+V A +RD++TGDG+ + ITKDG KEY
Sbjct: 152 -----YREEMSVNDGIKLAVKAINV-------AIKRDVFTGDGLLVVTITKDGYKEY 196
>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 203
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 56/237 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL- 79
G TTV + + ++A+DTR S G IY + +K+ +H + I + L
Sbjct: 7 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 66
Query: 80 --PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+Y K MS +LA +++ ++ G ++FPY ++ G D + + ++S D +G
Sbjct: 67 KAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEKPR--LFSVDMVG 124
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
N+ A GS ++LD++
Sbjct: 125 GITEDNYAAAGSGMEFAYSILDSE------------------------------------ 148
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEY 254
+R + +V+ KAI+V A +RD++TGDG+ + ITKDG KEY
Sbjct: 149 -----YREEMSVNDGIKLAVKAINV-------AIKRDVFTGDGLLVVTITKDGYKEY 193
>gi|358391261|gb|EHK40665.1| beta subunit Pup3 of the 20S proteasome [Trichoderma atroviride IMI
206040]
Length = 205
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 102/251 (40%), Gaps = 55/251 (21%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFT 75
SP+S NGG VA+ G D IA D RL + K+F + + T + T
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQYGDVFLGLTGLATDVST 62
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
++ L MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ GK +
Sbjct: 63 VSDLFRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
+D IG + A +F G+ +S+Q+ + G+ DL E
Sbjct: 123 GFDSIGCIDFAKDFIVSGT------------------ASEQLFGMCEGLWEPDL----EP 160
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
+AL + A A +RD +G G H+ I KD
Sbjct: 161 DAL--------------------------FETISQALLTAVDRDALSGWGAHVYIIEKDK 194
Query: 251 IKEYNFPLRKD 261
+ + R+D
Sbjct: 195 VTKRLLKGRQD 205
>gi|397613757|gb|EJK62406.1| hypothetical protein THAOC_16986 [Thalassiosira oceanica]
Length = 363
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 22/184 (11%)
Query: 92 MSTTSLAKMISIMMYGKRFFPYYTSTIIAGL--DPEG---KGCVYSYDPIGHTERANFRA 146
M S+A ++ ++Y +R FP+Y+ ++AG+ D G G Y YD IG ER +
Sbjct: 186 MHVQSIANLLQQVLYSRRSFPFYSFCVVAGIGRDAHGDALSGYAYVYDAIGSYERVAVAS 245
Query: 147 GGSSGALLQALLD----NQVGIIQHSSKQMK---SVLGGIRTHDLALTREINALSSKLTI 199
G+ L+Q +LD +S +Q++ S++ G+ +A I+A ++
Sbjct: 246 SGTGRELMQPVLDRLFSEPCDGSDNSCEQVRDGVSLVEGVGRDPMA----ISAGEQRVGA 301
Query: 200 LLGFRN--QENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG-IKEYNF 256
G R Q V + + A+ V AF + AER+I GD V +C + +G + Y+
Sbjct: 302 AGGLRPPVQTTVSCS---WQTAVKHVATAFQSVAEREISVGDDVVVCVMRSNGSTQTYSI 358
Query: 257 PLRK 260
PL++
Sbjct: 359 PLKR 362
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 13 IQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLS-AGYNIYTRE 54
+ + F PY NGG AVAG D+ +IASDTRL+ GY I +R+
Sbjct: 23 LSNEFDPYQLNGGLVAAVAGKDFVVIASDTRLTDGGYGINSRK 65
>gi|347826593|emb|CCD42290.1| similar to proteasome subunit beta type-3 [Botryotinia fuckeliana]
Length = 212
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 50/252 (19%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH---YYYRPTYNFLMIF 74
SP+S NGG VA+ G D IA D RL + K+F + Y T +
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVS 62
Query: 75 TITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCV 130
T++ L MY + +S T++A ++S +Y +RF P++ S ++AGLD + GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLDQKTGKPFI 122
Query: 131 YSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
+D IG + A +F G+ +S Q+ G+ DL
Sbjct: 123 CGFDSIGCIDFAKDFIVSGT------------------ASDQLFGTCEGLWEPDL----- 159
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
L+S++ + P L + IS A A +RD +G G H+ I KD
Sbjct: 160 ---LNSQI-------------QGPEDLFETIS---QALLNAVDRDALSGWGAHVYIIEKD 200
Query: 250 GIKEYNFPLRKD 261
+ + R+D
Sbjct: 201 KVTKRLLKGRQD 212
>gi|397628563|gb|EJK68962.1| hypothetical protein THAOC_09830 [Thalassiosira oceanica]
Length = 204
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT----- 77
NG +A+AG D IASD RL Y + K+F R + T
Sbjct: 7 NGAAIIAMAGKDCVAIASDNRLGISYQTVAMDFKKVF-KMNDRLMVGLAGLATDVQTLDQ 65
Query: 78 ILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDP 135
+L F+M L+E + M+ ++S M+Y KRF PY+ +IAGLDP+GK + + D
Sbjct: 66 LLRFRMNLYELREEREMTPEVFTNLMSNMLYEKRFGPYFCEPVIAGLDPKGKPFLGTMDL 125
Query: 136 IGHTERA-NFRAGGSS 150
IG A +F G+
Sbjct: 126 IGAQAMAKDFCVAGTC 141
>gi|389860550|ref|YP_006362789.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525453|gb|AFK50651.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 205
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 56/234 (23%)
Query: 25 GTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHY---YYRPTYNFLMIFTITI 78
GT + + ++A + R++ I ++ KLF +H + T + ++ +
Sbjct: 10 GTVIGIKTSSGVVLAGEKRMTYDGFILSKSVRKLFPITEHTAVGFAGLTGDMNFLYRVLK 69
Query: 79 LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGH 138
+ Y EH + + T SLAK++SI++Y + FP T ++ G D ++ D +G
Sbjct: 70 TEAKNYELEHGREIKTRSLAKLLSIILYSYKLFPMLTEAVVGGFDE--APSLFVLDAVGS 127
Query: 139 TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLT 198
+ A GS L + II+ S ++
Sbjct: 128 LLEERYTALGSGSQL-------ALSIIEQSYRE--------------------------- 153
Query: 199 ILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+PLE+A ++ A AA ERD+ +GDGV + IT++GIK
Sbjct: 154 --------------DMPLEEAKNLAVKAVLAAIERDVLSGDGVDVLVITREGIK 193
>gi|358378900|gb|EHK16581.1| hypothetical protein TRIVIDRAFT_183933 [Trichoderma virens Gv29-8]
Length = 205
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 102/251 (40%), Gaps = 55/251 (21%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFT 75
SP+S NGG VA+ G D IA D RL + K+F + + T + T
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQYGDVFLGLTGLATDVST 62
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
++ L MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ GK +
Sbjct: 63 VSDLFRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
+D IG + A +F G+ +S+Q+ + G+ DL E
Sbjct: 123 GFDSIGCIDFAKDFIVSGT------------------ASEQLFGMCEGLWEPDL----EP 160
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
+AL + A A +RD +G G H+ I KD
Sbjct: 161 DAL--------------------------FETISQALLNAVDRDALSGWGAHVYIIEKDK 194
Query: 251 IKEYNFPLRKD 261
+ + R+D
Sbjct: 195 VTKRLLKGRQD 205
>gi|336272343|ref|XP_003350928.1| hypothetical protein SMAC_04233 [Sordaria macrospora k-hell]
gi|380090695|emb|CCC04865.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 104
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF 59
QH F PY+DNGG+T+A+AG D+ I+A DTRL++GY+I +R KLF
Sbjct: 32 QHRFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLF 77
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 96/237 (40%), Gaps = 55/237 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTI 76
G TTV + D I+A+D R S G + +E KL+ D Y + I +
Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRL 64
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
I ++Y + + + A ++S +++ R FP+ T II G D ++S DP+
Sbjct: 65 LIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPL 124
Query: 137 -GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSS 195
G E F A GS + G+++ + SV GI+ LAL NAL S
Sbjct: 125 GGMNEEKTFTATGSGSPI-------AYGVLEAGYDRDMSVEEGIK---LAL----NALKS 170
Query: 196 KLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
A ERD ++G+G+ L ITKDG+K
Sbjct: 171 ----------------------------------AMERDTFSGNGISLAVITKDGVK 193
>gi|145341760|ref|XP_001415971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576194|gb|ABO94263.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYN----IYTREQSKLFDHYYYRPTYNFLMIFTITI 78
NG +A+ G D IASD RL N + + K+ D Y T L+ +T+
Sbjct: 7 NGAAVIAMTGKDCVAIASDLRLGINQNQTAAVDYSKLHKIHDRLYLGLT--GLIADQLTL 64
Query: 79 ---LPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
L F+ MY N+VMS ++S +Y KRF PYYT ++AGLD +GK + S
Sbjct: 65 AQKLKFKHDMYELRENRVMSPKVFGAVVSATLYEKRFSPYYTEPVVAGLDADGKPYITSM 124
Query: 134 DPIG 137
D IG
Sbjct: 125 DLIG 128
>gi|310793894|gb|EFQ29355.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 205
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT 77
SP+S NGG VA+ G D IA D RL + K+F + L T
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDVFLGLTGLATDVTT 62
Query: 78 I-----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
+ MY + ++ T+ A ++S +Y +RF PY+ S ++AGLDP+ GK +
Sbjct: 63 VGDLFRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 123 GFDSIGCIDFAKDFIVSGTASEQLFGMCES 152
>gi|380481881|emb|CCF41580.1| proteasome component PUP3 [Colletotrichum higginsianum]
Length = 205
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT 77
SP+S NGG VA+ G D IA D RL + K+F + L T
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDVFLGLTGLATDVTT 62
Query: 78 I-----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
+ MY + ++ T+ A ++S +Y +RF PY+ S ++AGLDP+ GK +
Sbjct: 63 VGDLFRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 123 GFDSIGCIDFAKDFIVSGTASEQLFGMCES 152
>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
gi|302595715|sp|A2BN27.1|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
Length = 212
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 56/243 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
G TTV + D+ ++A+D R +AGY + + K+ Y ++ +L
Sbjct: 14 KGTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQMLAEW 73
Query: 83 MYLHEH------NKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ H H + MS + A+ +SI+++ +F+PY ++ G D + + +Y+ D
Sbjct: 74 LANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGGYDTQPR--LYNIDWF 131
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G + A GS +G+I+ + S
Sbjct: 132 GSVTEEKYVATGSGSP-------TAIGVIE------------------------DQYSPN 160
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
L+ +E+A+ + K A ++ RD +TG+GV + I KD +EY+F
Sbjct: 161 LS-----------------MEEAVELAKRAVASSIRRDTFTGNGVDVVVIGKDFYREYSF 203
Query: 257 PLR 259
L+
Sbjct: 204 ELK 206
>gi|448107066|ref|XP_004200900.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|448110074|ref|XP_004201531.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359382322|emb|CCE81159.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359383087|emb|CCE80394.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
Length = 206
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI 78
P+S NGG+ VA+ G D IASD RL + K+F + + + T I
Sbjct: 4 PFSLNGGSAVAMVGKDCVAIASDLRLGNQSLGLSNNFEKIF-QFGDKTFLGLTGLATDVI 62
Query: 79 LPFQMYLHEHN-------KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK-GCV 130
+++ +HN + + +LA ++S +Y KRF PY+ S ++AGLDP+ +
Sbjct: 63 TLSEVFRFKHNLYKLREERDIEPKTLANLVSSTLYEKRFGPYFVSPLVAGLDPKSNVPFI 122
Query: 131 YSYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F GG++ L L ++
Sbjct: 123 CGFDSIGCIDFAKDFIVGGTASDQLYGLCES 153
>gi|334362289|gb|AEG78344.1| proteasome subunit beta type-1 [Epinephelus coioides]
Length = 60
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 35/40 (87%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIY 51
P++H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I+
Sbjct: 21 PVEHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIH 60
>gi|384501018|gb|EIE91509.1| hypothetical protein RO3G_16220 [Rhizopus delemar RA 99-880]
Length = 204
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYR----PTYNFLMIFTITI 78
NGG+ VA+ G D IA+D RL A + + E K+F P +I
Sbjct: 7 NGGSVVAMVGKDCVAIAADKRLGAQFMTVSTEFQKIFKATEKTLIGLPGLATDVITLADR 66
Query: 79 LPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
F+ MY + + +LA M+S +Y +RF PY+ +IAGLD K + S D I
Sbjct: 67 FRFKTNMYKMREEREIEPKALAHMVSSTLYERRFGPYFVEPVIAGLDKHNKPFICSMDLI 126
Query: 137 GHTERA-NFRAGGSSGALLQALLDN 160
G A +F G++G L + ++
Sbjct: 127 GCINFAKDFVVSGTAGPNLYGMCES 151
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 95/234 (40%), Gaps = 55/234 (23%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTITIL 79
TTV + D I+A+D R S G + +E KL+ D Y + I + I
Sbjct: 3 TTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIA 62
Query: 80 PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI-GH 138
++Y + + + A ++S +++ R FP+ T II G D ++S DP+ G
Sbjct: 63 EAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGM 122
Query: 139 TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLT 198
E F A GS + G+++ + SV GI+ LAL NAL S
Sbjct: 123 NEEKTFTATGSGSPI-------AYGVLEAGYDRDMSVEEGIK---LAL----NALKS--- 165
Query: 199 ILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
A ERD ++G+G+ L ITKDG+K
Sbjct: 166 -------------------------------AMERDTFSGNGISLAVITKDGVK 188
>gi|156036470|ref|XP_001586346.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980]
gi|154698329|gb|EDN98067.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 206
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 101/252 (40%), Gaps = 56/252 (22%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH---YYYRPTYNFLMIF 74
SP+S NGG VA+ G D IA D RL + K+F + Y T +
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVS 62
Query: 75 TITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCV 130
T++ L MY + +S T++A ++S +Y +RF P++ S +IAGLD + GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVIAGLDQKTGKPFI 122
Query: 131 YSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
+D IG + A +F G+ +S Q+ G+ DL
Sbjct: 123 CGFDSIGCIDFAKDFIVSGT------------------ASDQLFGTCEGLWEPDLG---- 160
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
P L + IS A A +RD +G G H+ I KD
Sbjct: 161 -----------------------PEDLFETIS---QALLNAVDRDALSGWGAHVYIIEKD 194
Query: 250 GIKEYNFPLRKD 261
+ + R+D
Sbjct: 195 KVTKRLLKGRQD 206
>gi|379005617|ref|YP_005261289.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
gi|375161070|gb|AFA40682.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
Length = 203
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 55/242 (22%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLM----IFTIT 77
G T V + D ++A++ R+S G+ + K+F D + + + I
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ + Y E K + S+AK++S++M+ +R+ P++ ++ G+D EG + DP+G
Sbjct: 68 KINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEVLVGGVDEEGNHLIV-MDPLG 126
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
N+ A G+ L ++LD
Sbjct: 127 SLIEDNYAALGTGAKLAISVLDT------------------------------------- 149
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFP 257
G+R + L+ A + A AA ERD +G G+ L I + G KE
Sbjct: 150 ----GYRED-------ITLQDAKKLAVKALKAAIERDPVSGGGIDLVLIDQTGAKEEEVK 198
Query: 258 LR 259
++
Sbjct: 199 VQ 200
>gi|386876203|ref|ZP_10118332.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386805984|gb|EIJ65474.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 194
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 56/238 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQM 83
G T V + + AS+ R++ G + ++ K F ++ + IL Q+
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKSTKKTFPITSQVGATCAGLVADMQILTLQI 62
Query: 84 YL------HEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
E + + ++AKM+S MMY +R+FP T I+ G+ K +Y+ DP+G
Sbjct: 63 AALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGV--VDKPIMYTLDPLG 120
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+ A G+ + +LD Q
Sbjct: 121 SVLPDEYAAVGTGAEMALGVLDPQY----------------------------------- 145
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
+ N+ K ++AI + K A +AA RD +GDG+ + ITKDGI+E+
Sbjct: 146 --------KPNMSK-----DEAIDLAKRAVRSAALRDSASGDGIDILVITKDGIEEFT 190
>gi|308799609|ref|XP_003074585.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
gi|116000756|emb|CAL50436.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
Length = 203
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 28 VAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ----- 82
VA+ G D IASD RL N Q+ D+ ++ L + ++ Q
Sbjct: 10 VAMVGKDCVAIASDLRLGINQN-----QTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQ 64
Query: 83 -------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDP 135
MY N+VMS A ++S +Y KRF PYYT ++AGLD +GK + S D
Sbjct: 65 KLRFKHDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDKDGKPYITSMDL 124
Query: 136 IGHTERAN 143
IG A+
Sbjct: 125 IGADASAD 132
>gi|403374952|gb|EJY87444.1| Proteasome subunit beta type-3 [Oxytricha trifallax]
Length = 208
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 25/155 (16%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQS-----KLFDHYYYR--------PTYN 69
NG + VA++G + IA+DTRLS + T + S K+ D T+N
Sbjct: 7 NGNSMVAMSGKNCVAIATDTRLST--QLMTVDTSFQRVFKVTDQCLMGVSGLGTDVQTFN 64
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP----E 125
LM F + MY + + M + + +K+++ +Y KRF PY+ S ++AGLD E
Sbjct: 65 SLMKFKL-----NMYRLKEGREMKSETFSKLVATSLYEKRFGPYFVSPVVAGLDKISDTE 119
Query: 126 GKGCVYSYDPIGH-TERANFRAGGSSGALLQALLD 159
K + +YD IG+ + F G+ LL + +
Sbjct: 120 YKPVICTYDSIGYRSNNGEFEVAGTGAELLYGVCE 154
>gi|428162279|gb|EKX31444.1| proteasome subunit beta type 3 [Guillardia theta CCMP2712]
Length = 208
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 16/126 (12%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYY--------RPTYNFL 71
NGG + +AG + IA D R A Y +++K++ D + + T+
Sbjct: 7 NGGCVIGMAGKNCVAIACDKRYGAQYQTLATDKTKVYKMHDQLFIGLAGLATDQQTFYER 66
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+ F + MY +++ S KM+S ++Y KRF PY+ +IAGLD E K ++
Sbjct: 67 LKFRLA-----MYSLREERLIKPASFGKMVSTLLYEKRFGPYFIEPVIAGLDKENKPYLF 121
Query: 132 SYDPIG 137
S D IG
Sbjct: 122 SSDFIG 127
>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595720|sp|A4WMZ0.1|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 203
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 55/242 (22%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLM----IFTIT 77
G T V + D ++A++ R+S G+ + K+F D + + + I
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGRKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ + Y E K + S+AK++S++M+ +R+ P++ ++ G+D EG + DP+G
Sbjct: 68 KINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEVLVGGVDEEGSHLIV-MDPLG 126
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
N+ A G+ L ++LD
Sbjct: 127 SLIEDNYAALGTGAKLAISVLDT------------------------------------- 149
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFP 257
G+R + L+ A + A AA ERD +G G+ L I + G KE
Sbjct: 150 ----GYRED-------ITLQDAKKLAVKALKAAIERDPVSGGGIDLVLIDQTGAKEEEVK 198
Query: 258 LR 259
++
Sbjct: 199 VQ 200
>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
gi|340623725|ref|YP_004742178.1| proteasome subunit beta [Methanococcus maripaludis X1]
gi|74555067|sp|Q6LZD4.1|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
gi|339903993|gb|AEK19435.1| proteasome subunit beta [Methanococcus maripaludis X1]
Length = 219
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 55/239 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV + D ++A+D R + G I +E KL+ D Y + + +
Sbjct: 14 GTTTVGLLCNDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLI 73
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
++Y M+ S +IS +++G R +P T I+ G D ++S DP+G
Sbjct: 74 SAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSLDPVG 133
Query: 138 H-TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
E ++F A GS +L+++
Sbjct: 134 GINEESSFTATGSGSPTAYGVLESEY---------------------------------- 159
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
K+ + +EK + + A ++A +RD Y+G+G+ L I KDG+K Y+
Sbjct: 160 --------------KSDIAIEKGLLIAVKALSSAMQRDAYSGNGISLAHINKDGVKLYS 204
>gi|302925511|ref|XP_003054110.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735051|gb|EEU48397.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 205
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFT 75
SP+S NGG VA+ G D IA D RL + K+F + + T + T
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDVFLGLTGLATDVNT 62
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
++ L MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ GK +
Sbjct: 63 VSDLFRYKTNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLD 159
+D IG + A +F G++ L + +
Sbjct: 123 GFDSIGCIDFAKDFIVSGTASEQLFGMCE 151
>gi|409095355|ref|ZP_11215379.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 206
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 56/237 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRP---TYNFLMIFTI 76
G TTV + D I+A+D R + G I ++E +K+F DH + L + +
Sbjct: 9 KGTTTVGLICRDGVILAADKRATMGNMITSKEVTKIFQIDDHLAIAGAGLVGDILSMVRL 68
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y + MS L +I+ +++G R + Y+ ++ G D E + +YS D
Sbjct: 69 LRAEARLYRARVGREMSVKVLTTLIANILHGGRGYGYFAWFLVGGYDTEPR--LYSIDAA 126
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G + A GS A+L+N+
Sbjct: 127 GGVTEEKYVAAGSGMEFALAILENEF---------------------------------- 152
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
+ LE + + A AA +RD+YTG+G+ L +TK+G +E
Sbjct: 153 --------------SEGLSLEDGMRLAAKAVNAAIKRDVYTGEGITLVVVTKEGYRE 195
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 93/236 (39%), Gaps = 55/236 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLM----IFTIT 77
G T V + ++A++ R+S G+ + K+F D + + + I
Sbjct: 8 GATAVGIKTAGGVVLAAEKRVSYGFYTLSSSGKKVFVVDDKLAIASAGIIADMQALAKIL 67
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
L + Y E K S ++AK++S++M+ +RF P++ ++ G+D EG + DP+G
Sbjct: 68 KLNAKSYELEMKKKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGVDEEGPHLIV-MDPLG 126
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
N+ A G+ L A+LD
Sbjct: 127 SLIEDNYAALGTGAKLAAAVLDGN------------------------------------ 150
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
+RN + +E+A + A AA ERD +G G+ L + + G +E
Sbjct: 151 -----YRND-------MSIEEAKKLAVQALKAAIERDPVSGGGIDLVVVDEKGARE 194
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 55/236 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV + D I+A+D R S G I +E KL+ D Y + I
Sbjct: 6 GTTTVGLICDDAVILATDKRASMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRAL 65
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI- 136
I ++Y K +S + A ++S +++ R FP+ T II G D ++S DP+
Sbjct: 66 IAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQIIIGGYDLTDGPKLFSLDPLG 125
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G E F + GS + +L+ + +D R+++
Sbjct: 126 GMNEEKTFTSTGSGSPIAYGVLEAE--------------------YD----RDMS----- 156
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+E+ + + A +A ERD Y+G+GV + ITK+G+K
Sbjct: 157 -------------------IEEGLKLALKALKSAMERDTYSGNGVSVAVITKEGVK 193
>gi|340344597|ref|ZP_08667729.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519738|gb|EGP93461.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 197
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 93/238 (39%), Gaps = 56/238 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQM 83
G T V + ++AS+ R++ G + ++ K F ++ + IL Q+
Sbjct: 7 GATAVGITFNGGIVLASEKRIAFGNFLVSKSSKKTFSITSKVGAACAGLVADMQILTLQI 66
Query: 84 YL------HEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
E + + ++AKM+S MMY +R+FP T I+ G+ K +Y+ DP+G
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV--VDKPILYTLDPLG 124
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+ A G+ + +LD Q
Sbjct: 125 SVLPDEYAAVGTGAEMALGVLDPQF----------------------------------- 149
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
K + E+AI + K A +AA RD +GDG+ + +TKDG KE+
Sbjct: 150 -------------KPNMTQEEAIDLAKRAVRSAALRDSASGDGLDILVVTKDGTKEFT 194
>gi|118376326|ref|XP_001021345.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89303112|gb|EAS01100.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 209
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI 78
P+S NGG+ +A+ G I +D RL A + K+F R N L+ T
Sbjct: 4 PFSYNGGSMLAMKGEQCVAIGADRRLGAQFQTVATNFQKVF-----RIQDNILLGLTGLA 58
Query: 79 LPFQ-----------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEG 126
Q +Y NK M + +IS +Y KR+ PY+ S I+AGL+ E
Sbjct: 59 TDVQTFHRLIQYKVNLYRLRENKDMKVNTFVNLISATLYEKRWGPYFVSPIVAGLEYDEV 118
Query: 127 KGCV---YSYDPIGHTE-RANFRAGGS 149
KG + +YD IG T F+ GG+
Sbjct: 119 KGVIPITATYDSIGCTSIEGEFQVGGT 145
>gi|440636325|gb|ELR06244.1| proteasome component PUP3 [Geomyces destructans 20631-21]
Length = 205
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 101/251 (40%), Gaps = 55/251 (21%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFT 75
SP+S NGG VA+ G D IA D RL + K+F++ Y T + T
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQSLTVSNNFPKVFNYGDVYLGLTGLATDVAT 62
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
++ L MY + ++ ++ A ++S +Y KRF P++ S ++AGLDP+ G +
Sbjct: 63 VSDLFRYKVNMYRLREERNIAPSTFANLVSSSLYEKRFGPFFVSPVVAGLDPKTGIPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
+D IG + A +F G+ +S Q+ G+ DL
Sbjct: 123 GFDSIGCIDFAKDFIVAGT------------------ASDQLFGTCEGLWEPDL------ 158
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
P L + IS A A +RD +G G H+ I KD
Sbjct: 159 ---------------------EPEDLFETIS---QALLNAVDRDALSGWGAHVYIIEKDK 194
Query: 251 IKEYNFPLRKD 261
+ + R+D
Sbjct: 195 VTKRLLKGRQD 205
>gi|407464585|ref|YP_006775467.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407047773|gb|AFS82525.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 194
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 56/238 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQM 83
G T V + + AS+ R++ G + ++ K F ++ + IL Q+
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKSTKKTFPITNKVGATCAGLVADMQILTLQI 62
Query: 84 YL------HEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
E + + ++AKM+S MMY +R+FP T I+ G+ K +Y+ DP+G
Sbjct: 63 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV--VDKPIMYTLDPLG 120
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+ A G+ + +LD Q
Sbjct: 121 SVLPDEYAAVGTGAEMALGVLDPQF----------------------------------- 145
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
+ N+ K ++A+ + K A AAA RD +GDG+ + ITKDG +EY+
Sbjct: 146 --------KPNMTK-----DEAVDLAKRAVRAAALRDSASGDGLDILVITKDGTEEYS 190
>gi|3649671|emb|CAA09596.1| Pros26 [Drosophila melanogaster]
Length = 61
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 34/39 (87%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQ 55
FSPY NGG+ VA+AG D+A+IA+DTRLS+GYNI++R Q
Sbjct: 22 FSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQ 60
>gi|315428112|dbj|BAJ49699.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 168
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL-----MIFTI 76
G TT+ + G D +IA++ R + GY + +++ K+F + + MI +
Sbjct: 17 GATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNMIKEV 76
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
T + +Y E S ++AK++S ++G R+FPY+ TI+ G+D +G V DP+
Sbjct: 77 TAV-VNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGIDSQGPH-VIVLDPL 134
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGII 165
G ++ G+ + +++N G I
Sbjct: 135 GSMIEDDYAVVGTGAEVAVGVIENYTGKI 163
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTIT 77
G T V + D ++A++ R+S G+ + K+F D + + I
Sbjct: 8 GATAVGIRAKDGVVLAAEKRVSYGFYTLSTAGKKVFIVNDKLAIASAGIIADMQALAKIL 67
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
L + Y E K + ++AK++S++M+ +RF P+Y ++ G+D EG + DP+G
Sbjct: 68 KLNARSYELEVKKKPTVKAMAKLLSVVMFSRRFMPFYAEVLVGGVDEEGPHLIV-MDPLG 126
Query: 138 HTERANFRAGGSSGALLQALLD 159
N+ A G+ L +LLD
Sbjct: 127 SLIEDNYAALGTGAKLAVSLLD 148
>gi|67623727|ref|XP_668146.1| proteasome subunit beta type 1 (20S proteasome alpha subunit F)
(20S proteasome subunit beta-6) [Cryptosporidium
hominis TU502]
gi|54659317|gb|EAL37899.1| proteasome subunit beta type 1 (20S proteasome alpha subunit F)
(20S proteasome subunit beta-6) [Cryptosporidium
hominis]
Length = 107
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 13 IQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK 57
I+H+F+PY +NGG+ VAVAG D+ +IA+DTRLS Y I +R SK
Sbjct: 33 IEHNFNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSK 77
>gi|255950036|ref|XP_002565785.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592802|emb|CAP99170.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 206
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 99/254 (38%), Gaps = 60/254 (23%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
+P+ NGG VA+ G D IA D RL + K+F+ Y TY L
Sbjct: 3 NPFDINGGACVAMVGKDCVAIACDLRLGMQSLTISNNFPKIFN--YAPSTYLGLTGLATD 60
Query: 73 IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKG 128
+ T++ L MY + ++ +LA ++S +Y KRF PY+ S +IAG++P GK
Sbjct: 61 VNTVSDLFRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVIAGINPTTGKP 120
Query: 129 CVYSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
+ +D IG + A +F G+ +S Q+ G+ DLA
Sbjct: 121 FICGFDSIGCIDFAKDFIVSGT------------------ASDQLFGTCEGLWEPDLA-- 160
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
E + A +A +RD +G G + I
Sbjct: 161 ----------------------------PEDLFETISQALLSAVDRDALSGWGAQVYIIE 192
Query: 248 KDGIKEYNFPLRKD 261
KD + + R+D
Sbjct: 193 KDKVTQRLLKGRQD 206
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 95/237 (40%), Gaps = 56/237 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL 79
G TTV + D ++A+D R S G +Y + +K+ +H + I + L
Sbjct: 9 KGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRL 68
Query: 80 ---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y + K MS +LA +++ M+ G R PY ++ G D + + +YS D +
Sbjct: 69 LRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEKPR--LYSVDMM 126
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G + A GS ++LD++
Sbjct: 127 GGITEDKYVAAGSGMEFAYSVLDSEY---------------------------------- 152
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
+ + + + I + +A +A +RD+++GDG+ + IT++G +E
Sbjct: 153 --------------REDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITEEGYRE 195
>gi|57641364|ref|YP_183842.1| proteasome subunit beta [Thermococcus kodakarensis KOD1]
gi|74502448|sp|Q5JDJ9.1|PSB1_PYRKO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|57159688|dbj|BAD85618.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
Length = 203
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 56/239 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL 79
G TTV + D ++A+D R S G + + +K+F DH I ++ L
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSERVTKVFQIDDHLAIAGAGTVGDILSLVRL 65
Query: 80 ---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y + ++ MS +LA + S +++ R F Y ++ G D + +YS D
Sbjct: 66 LRAEAKLYRAKVSREMSVKALATLTSNILHSGRGFAYMAWFLVGGYDSAPR--LYSIDAA 123
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G F A GS +
Sbjct: 124 GGVTEDRFTAAGS------------------------------------------GMEFA 141
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
++L +EN + +PLE+ + + A AA +RD++TG GV L IT++G +E++
Sbjct: 142 FSVL-----EENY-RDGIPLEEGVKLALRAIKAATKRDVFTGGGVTLVTITEEGYREWS 194
>gi|397594765|gb|EJK56324.1| hypothetical protein THAOC_23819, partial [Thalassiosira oceanica]
Length = 76
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 210 DKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
++ +P E+ + +VKDAF A ERDIYTGD V + ITKDGI + F L+ D
Sbjct: 25 ERRDLPAEEVVEIVKDAFLTAGERDIYTGDAVDIMVITKDGIDKQTFQLKAD 76
>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
gi|302595703|sp|C6A2V9.1|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
Length = 207
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 56/237 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYR---PTYNFLMIFTI 76
G TTV + D ++ +D R S G + ++ +K+F DH + L +
Sbjct: 8 KGTTTVGIVCKDGVVLTADRRASLGNMVISKGVTKIFQVDDHLALAGAGAVGDILSLVRA 67
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y + K MST +LA + S ++ G+++ PY+ +I G D K +YS D
Sbjct: 68 LRAESKLYRAKVGKEMSTKALATLTSNILSGRKYLPYFGWFLIGGYDE--KPSLYSIDMA 125
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G + + GS ++LDN ++S K
Sbjct: 126 GGITEDKYVSAGSGMEFAYSILDN-----EYSEK-------------------------- 154
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
+ L + + A AA +RD++TGDG+ + I ++G +E
Sbjct: 155 -----------------ITLNNGVKLAIKAINAAIKRDVFTGDGIMVVTIDREGYRE 194
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT------YNFLMIF 74
G T V + D ++A++ R+S G+ + K+F D I
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFIINDKLAIASAGIIADMQTLARIL 67
Query: 75 TITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
+ ++ +++ E K + ++AK++SI+M+ +R P+Y ++ G+D EG + D
Sbjct: 68 KLNVMSYEL---EVRKKPTVRAMAKLLSIIMFSRRLLPFYAEVLVGGVDEEGPHLIV-MD 123
Query: 135 PIGHTERANFRAGGSSGALLQALLD 159
P+G N+ A G+ L +LLD
Sbjct: 124 PLGSLIEDNYAALGTGAKLAVSLLD 148
>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
gi|302595749|sp|A4FYA5.1|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanococcus maripaludis
C5]
Length = 219
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 55/239 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL--MIFTITIL 79
G TTV + D ++A+D R + G I +E KL+ D Y + I I+
Sbjct: 14 GTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRII 73
Query: 80 PFQMYLHEH--NKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ +H+ M+ S +IS +++G R +P T I+ G D ++S DP+G
Sbjct: 74 SAEAKIHKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSLDPVG 133
Query: 138 H-TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
E ++F A GS +L+ +
Sbjct: 134 GINEESSFTATGSGSPTAYGVLEAEY---------------------------------- 159
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
++ V ++K + V A ++A +RD Y+G+G+ L I KDG+K Y+
Sbjct: 160 --------------RSDVTIDKGLLVAVKALSSAMQRDAYSGNGISLAHINKDGVKLYS 204
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 93/242 (38%), Gaps = 55/242 (22%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTIT 77
G T V + + ++A++ R+S G+ + K+F D + + I
Sbjct: 8 GATAVGIKTKEGVVLAAEKRVSYGFYTLSTAGKKVFIVNDRLAIASAGIIADMQTLAKIL 67
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
L + Y E + S ++AK++S++M+ +RF P++ ++ G+D EG + DP+G
Sbjct: 68 KLNAKAYELEMKRKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGIDDEGPHLIV-MDPLG 126
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
N+ A G+ L A++D
Sbjct: 127 SLIEDNYAALGTGAKLAIAIIDASY----------------------------------- 151
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFP 257
K + L+ A + A AA ERD +G G+ L I K+G +E
Sbjct: 152 -------------KPDMSLQDAKKLAVQALKAALERDPVSGGGIDLVVIDKNGAREEEVK 198
Query: 258 LR 259
L+
Sbjct: 199 LQ 200
>gi|190348459|gb|EDK40915.2| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF---- 74
P+S NGG VA+ G D IA DTRL + + + F+ + FL +
Sbjct: 4 PFSINGGAAVAMVGKDCIAIACDTRLGS----QSLGLANNFEKVFQMGKTTFLGLTGLAT 59
Query: 75 -TITI-----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
IT+ L +Y + M +LA ++S +Y +RF PY+ S I+AGL G+
Sbjct: 60 DVITLREDFRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLGKGGQP 119
Query: 129 CVYSYDPIGHTERA 142
+ +D IG + A
Sbjct: 120 FICGFDSIGCIDFA 133
>gi|425781832|gb|EKV19776.1| hypothetical protein PDIG_01170 [Penicillium digitatum PHI26]
gi|425782962|gb|EKV20840.1| hypothetical protein PDIP_12490 [Penicillium digitatum Pd1]
Length = 206
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 99/254 (38%), Gaps = 60/254 (23%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
+P+ NGG VA+ G D IA D RL + K+F+ Y TY L
Sbjct: 3 NPFDINGGACVAMVGKDCVAIACDLRLGMQALTISNNFPKIFN--YAPSTYLGLTGLATD 60
Query: 73 IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKG 128
+ T++ L MY + ++ +LA ++S +Y KRF PY+ S ++AG++P GK
Sbjct: 61 VNTVSDLFRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVLAGINPTTGKP 120
Query: 129 CVYSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
+ +D IG + A +F G+ +S Q+ G+ DLA
Sbjct: 121 FICGFDSIGCIDFAKDFIVSGT------------------ASDQLFGTCEGLWEPDLA-- 160
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
E + A +A +RD +G G + I
Sbjct: 161 ----------------------------PEDLFETISQALLSAVDRDALSGWGAQVYIIE 192
Query: 248 KDGIKEYNFPLRKD 261
KD + + R+D
Sbjct: 193 KDKVTQRLLKGRQD 206
>gi|315427032|dbj|BAJ48649.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485700|dbj|BAJ51354.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 201
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL-----MIFTI 76
G TT+ + G D +IA++ R + GY + +++ K+F + + MI +
Sbjct: 9 GATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNMIKEV 68
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
T + +Y E S ++AK++S ++G R+FPY+ TI+ G+D +G + DP+
Sbjct: 69 TAV-VNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGIDSQGPHVIV-LDPL 126
Query: 137 GHTERANFRAGGSSGALLQALLDN 160
G ++ G+ + +++N
Sbjct: 127 GSMIEDDYAVVGTGAEVAVGVIEN 150
>gi|340506918|gb|EGR32962.1| hypothetical protein IMG5_065490 [Ichthyophthirius multifiliis]
Length = 220
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 96/261 (36%), Gaps = 80/261 (30%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT-- 75
+P+ NGG + + G I+ D RL A + K+F + N L+ T
Sbjct: 3 NPFEYNGGAMIGMKGNGCVAISCDRRLGAQFQTVACNFQKVF-----KIQDNILLGLTGL 57
Query: 76 ------------ITIL------------PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFF 111
I IL +Y N+ M + +IS +Y KR+
Sbjct: 58 ATDVQTLQIKKNIQILNQFLKSHRQMEFKVNLYRLRENRDMKVETFINLISAALYEKRWG 117
Query: 112 PYYTSTIIAGLDPEGKGCVYSYDPIGHTE-RANFRAGGSSGALLQALLDNQVGIIQHSSK 170
PY+ I+ GL+ V SYD IG T NF+ GG++G D +G S +
Sbjct: 118 PYFVQPIVIGLEDGKTPMVASYDSIGCTSTNENFQVGGTAG-------DGLIG----SCE 166
Query: 171 QMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAA 230
M +R+ D TP LE VV A A
Sbjct: 167 SM------------------------------WRD----DLTPEQLE---DVVAQALLAG 189
Query: 231 AERDIYTGDGVHLCAITKDGI 251
A+RDI +G G + ITKD I
Sbjct: 190 ADRDILSGWGGIVYVITKDKI 210
>gi|302829446|ref|XP_002946290.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
gi|300269105|gb|EFJ53285.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
Length = 204
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIF 74
S +S NG VA+AG + I SD R Y + + K+F D Y +
Sbjct: 2 SIFSYNGSAIVAMAGKECVAIGSDLRFGVQYQTISCDTPKVFKIHDKLYL----GLSGLL 57
Query: 75 TITILPFQMYLHEHN-------KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
T Q L HN + M ++ M+S +Y +RF PY+ + ++AGL+P+G
Sbjct: 58 TDAQTLHQKLLFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPDGT 117
Query: 128 GCVYSYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+ D IG E A +F GG+S L + ++
Sbjct: 118 PYLSGMDTIGAIETAKDFMIGGTSPESLYGMCES 151
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 55/237 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTI 76
G TTV + D I+A+D R S G + +E KL+ D Y + I +
Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRL 64
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y + + + A ++S +++ R FP+ T II G D ++S DP+
Sbjct: 65 LTAEAKLYKMRTGRNIPPLACATLLSNILHSSRVFPFLTQIIIGGYDLLEGAKLFSLDPL 124
Query: 137 -GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSS 195
G E F A GS + +L+
Sbjct: 125 GGMNEEKTFTATGSGSPIAYGVLEA----------------------------------- 149
Query: 196 KLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
G+ + +V E+ I + +A +A ERD ++G+G+ L ITK+G+K
Sbjct: 150 ------GYDREMSV-------EEGIKLAINALKSAMERDTFSGNGISLAVITKEGVK 193
>gi|161528202|ref|YP_001582028.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595718|sp|A9A4A1.1|PSB1_NITMS RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|160339503|gb|ABX12590.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 198
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 56/238 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQM 83
G T V + + AS+ R++ G + ++ K F ++ + IL Q+
Sbjct: 7 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 66
Query: 84 YL------HEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
E + + ++AKM+S MMY +R+FP T I+ G+ K +Y+ DP+G
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV--VDKPIMYTLDPLG 124
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+ A G+ + +LD Q
Sbjct: 125 SVLPDEYAAVGTGAEMALGVLDPQF----------------------------------- 149
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
+ N+ K ++AI + K A AA+ RD +GDGV + ITKDG +E+
Sbjct: 150 --------KPNMTK-----DEAIDLAKRAVRAASLRDSASGDGVDVLVITKDGTEEFT 194
>gi|327304369|ref|XP_003236876.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326459874|gb|EGD85327.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 214
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
SP+ NGG VA+ G D IA D RL + E K+F+ Y TY L
Sbjct: 11 SPFDINGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFN--YAPSTYLGLTGLATD 68
Query: 73 IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKG 128
+ T++ L +Y + +S +LA ++S +Y KRF P++ S ++AG++ GK
Sbjct: 69 VNTVSQLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKP 128
Query: 129 CVYSYDPIGHTERA-NFRAGGSS 150
+ +D IG + A NF G++
Sbjct: 129 FICGFDSIGCIDFAKNFIVSGTA 151
>gi|146414175|ref|XP_001483058.1| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF---- 74
P+S NGG VA+ G D IA DTRL + + + F+ + FL +
Sbjct: 4 PFSINGGAAVAMVGKDCIAIACDTRLGS----QSLGLANNFEKVFQMGKTTFLGLTGLAT 59
Query: 75 -TITI-----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
IT+ L +Y + M +LA ++S +Y +RF PY+ S I+AGL G+
Sbjct: 60 DVITLREDFRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLGKGGQP 119
Query: 129 CVYSYDPIGHTERA 142
+ +D IG + A
Sbjct: 120 FICGFDLIGCIDFA 133
>gi|326472712|gb|EGD96721.1| proteasome subunit beta type-3 [Trichophyton tonsurans CBS 112818]
gi|326482041|gb|EGE06051.1| proteasome component PUP3 [Trichophyton equinum CBS 127.97]
Length = 206
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
SP+ NGG VA+ G D IA D RL + E K+F+ Y TY L
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFN--YAPSTYLGLTGLATD 60
Query: 73 IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKG 128
+ T++ L +Y + +S +LA ++S +Y KRF P++ S ++AG++ GK
Sbjct: 61 VNTVSQLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKP 120
Query: 129 CVYSYDPIGHTERA-NFRAGGSS 150
+ +D IG + A NF G++
Sbjct: 121 FICGFDSIGCIDFAKNFIVSGTA 143
>gi|453082236|gb|EMF10284.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 206
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 99/254 (38%), Gaps = 60/254 (23%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
SP+S NGG VA+ G D IA D RL + K+F + TY L
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFP--FGSSTYLGLTGLATD 60
Query: 73 IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKG 128
+ T++ L MY + +S + A ++S +Y KRF P++ S ++AGLD + GK
Sbjct: 61 VSTVSELFRYKVNMYRLREERDISPRTFANLVSSSLYEKRFGPWFISPVVAGLDSKTGKP 120
Query: 129 CVYSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
+ +D IG + A +F G+ +S Q+ G+ DL
Sbjct: 121 FICGFDSIGCIDFAKDFIVAGT------------------ASDQLFGTCEGLWEPDLG-- 160
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
P E + A +A +RD +G G H+ I
Sbjct: 161 -------------------------P---EDLFETMSQALLSAVDRDALSGWGAHVYIIE 192
Query: 248 KDGIKEYNFPLRKD 261
KD + + R+D
Sbjct: 193 KDKVTKRLLKGRQD 206
>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 210
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 104/253 (41%), Gaps = 67/253 (26%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI 73
Q S Y G TTV + D +IA+D+R + I + E K+ ++ N M
Sbjct: 3 QKDISRYM-KGTTTVGLVCTDGVVIAADSRATMDTFIASTEARKV-----WKIDENLGMT 56
Query: 74 FT---------ITILPFQMYLHEHN--KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
I IL Q +++ N K MS S A ++SI++ + P+Y I+ G+
Sbjct: 57 IAGLVGDAQELIRILKIQNEIYKMNERKQMSPRSAATLLSIILQENKMMPFYVQLIVGGV 116
Query: 123 DPEGKGCVYSYDPI-GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRT 181
+ +GKG VY+ D G+T+ + F A G SG+L +G ++ S K G+ T
Sbjct: 117 E-DGKGYVYNLDAAGGYTQESRFTATG-SGSL------TALGYLEDSYKP------GLTT 162
Query: 182 HDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGV 241
D AI + A A +RD TG+ +
Sbjct: 163 KD-----------------------------------AIKIAAKALLIAMQRDSATGNNM 187
Query: 242 HLCAITKDGIKEY 254
+ AIT G +EY
Sbjct: 188 TIAAITSRGYEEY 200
>gi|15920523|ref|NP_376192.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574822|sp|Q975U8.1|PSB1_SULTO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|15621306|dbj|BAB65301.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 197
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 60/239 (25%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM--------IFTIT 77
T + + D I+A++ RLS G + +R K+F + +M + +
Sbjct: 7 TALGIKLNDGIILAAERRLSYGGFVLSRSAKKVFKIGRFGIAGAGIMGDIQTLTRLMNVE 66
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
I ++MY +NK +S + AK++S+++Y ++ P+ + + G+D EG ++ DPIG
Sbjct: 67 IKYYEMY---NNKPISVKAAAKLLSVILYQYKWTPFISELLFGGVDDEGP-KLFVLDPIG 122
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
N+ A GS + +L+++ +D ++
Sbjct: 123 SLIEDNYAAVGSGARVAIGVLESE--------------------YDPSMN---------- 152
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
L+K +V A AA ERD+ +GDG+ + I +D +F
Sbjct: 153 ------------------LDKGKEIVLKALKAAIERDVTSGDGIDILTIKRDNTSSEDF 193
>gi|407462234|ref|YP_006773551.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045856|gb|AFS80609.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 194
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 56/238 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQM 83
G T V + + AS+ R++ G + ++ K F ++ + IL Q+
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 62
Query: 84 YL------HEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
E + + ++AKM+S MMY +R+FP T I+ G+ K +Y+ DP+G
Sbjct: 63 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV--VDKPIMYTLDPLG 120
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+ A G+ + +LD Q
Sbjct: 121 SVLPDEYAAVGTGAEMALGVLDPQF----------------------------------- 145
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
+ N+ K ++AI + K A AA+ RD +GDG+ + ITKDG +E+
Sbjct: 146 --------KPNMTK-----DEAIDLAKRAVRAASLRDSASGDGLDILVITKDGTEEFT 190
>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
aggregans DSM 17230]
Length = 200
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 55/241 (22%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT-IL 79
G T V + D ++A++ R+S G I +R K+F DH F + +++ I+
Sbjct: 9 GATAVGIKVNDGVVVAAEKRISYGGYIVSRAGKKVFRIADHMVIAAAGLFADMQSLSRII 68
Query: 80 PFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
++ E + M + AK++S ++Y + P+ + I AG D EG +Y DP+G
Sbjct: 69 SAEIMYRELLSSSKMRVRAAAKLLSAILYSYKLMPFLSEIIFAGFDEEGY-HLYVLDPVG 127
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
++ A G+ ++ +G+I+
Sbjct: 128 SIIEDDYAAIGTGASI-------AIGVIESE----------------------------- 151
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFP 257
++N +D+ E AI VK AA RD +GDG+ + +T +GI E +
Sbjct: 152 -----YKNTLTIDQAT---ELAIKSVK----AAISRDAVSGDGIDIAVVTNNGINERSIL 199
Query: 258 L 258
L
Sbjct: 200 L 200
>gi|340923906|gb|EGS18809.1| hypothetical protein CTHT_0054190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 206
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
SP+S NGG VA+ G + IA D RL + K+F DH + T +
Sbjct: 3 SPFSINGGACVAMVGKNCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVQ 62
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCV 130
+ I +Y + ++ + A ++S +Y +RF P++ S ++AGLDP+ G+ +
Sbjct: 63 TVADIFRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGEPFI 122
Query: 131 YSYDPIGHTERA 142
+D IG + A
Sbjct: 123 CGFDSIGCIDFA 134
>gi|268323699|emb|CBH37287.1| 20S proteasome, beta subunit [uncultured archaeon]
Length = 210
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 97/234 (41%), Gaps = 56/234 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTI 76
G TT+ + + ++AS+ R + G I ++ K++ D T + + I
Sbjct: 9 KGTTTIGLICGESVVLASEKRATMGSFIASKTAKKIYLVDDRIAMTTAGIVGDAQALVRI 68
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ Q+Y N+ M+ ++ ++S +M G+R++PY +I G+D +G +Y+ DP
Sbjct: 69 MTVELQLYKIRRNEPMTVKGISTLLSNVMNGQRYYPYIVQLLIGGIDRDG-AHLYTIDPF 127
Query: 137 -GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSS 195
G+TE + A GS + +L+N+ T D++
Sbjct: 128 GGNTEESEIAATGSGSPIAYGVLENKY------------------TKDIS---------- 159
Query: 196 KLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
LEK ++ A +A +RD +G+ + + ITKD
Sbjct: 160 --------------------LEKGTALAIQALYSAIKRDSASGEAIEVVTITKD 193
>gi|323454510|gb|EGB10380.1| hypothetical protein AURANDRAFT_71184 [Aureococcus anophagefferens]
Length = 535
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 20/140 (14%)
Query: 13 IQHHFSPYSDNGGTTVAVAGPDYAIIASDTR-------LSAGYNIYTREQSKLF------ 59
+ HH P S NG V +AG + IASDTR +S + ++ +LF
Sbjct: 185 VPHHGVPCSHNGAAIVCMAGKNCVAIASDTRFGLSQQTVSCDFQKVFKQSDRLFVGLAGL 244
Query: 60 --DHYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTST 117
D R T F + + Y +VM + A ++S M+Y KRF PY+
Sbjct: 245 ATDVQTLRNTLKFKREPALAL-----YELREERVMKPEAFAALLSHMLYEKRFGPYFVEP 299
Query: 118 IIAGLDPEGKGCVYSYDPIG 137
++AGL +G + D IG
Sbjct: 300 VVAGLKDDGSPFLCGMDLIG 319
>gi|294912864|ref|XP_002778209.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239886343|gb|EER10004.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 74
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Query: 12 PIQH--HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKL 58
P++H F+PY DNGGT +AV G DY ++++D R+S GY+I TR SK+
Sbjct: 23 PMEHKNEFNPYMDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKI 71
>gi|189205423|ref|XP_001939046.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975139|gb|EDU41765.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 205
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 99/251 (39%), Gaps = 55/251 (21%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFT 75
SP+S NGG VA+ G D IA D RL + K+F + + T + T
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGDVFLGLTGLATDVST 62
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVY 131
++ L MY + +S ++A ++S +Y KRF PY+ S +IAG++ GK +
Sbjct: 63 VSDLFRYKVNMYRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
+D IG + A +F G+ +S Q+ G+ DL
Sbjct: 123 GFDSIGCIDFAKDFIVSGT------------------ASDQLFGTCEGLWEPDLG----- 159
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
P L + IS A A +RD +G G H+ I KD
Sbjct: 160 ----------------------PEDLFETIS---QALLNAVDRDALSGWGAHVYIIEKDK 194
Query: 251 IKEYNFPLRKD 261
+ + R+D
Sbjct: 195 VTKRLLKGRQD 205
>gi|407921624|gb|EKG14765.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 205
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 96/251 (38%), Gaps = 55/251 (21%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFT 75
SP+S NGG VA+ G D IA D RL + K+F + Y T + T
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSYGDVYLGLTGLATDVST 62
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVY 131
+ L MY + +S ++A ++S +Y +RF PY+ S +IAG++ GK +
Sbjct: 63 VADLFRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFVSPVIAGINQTTGKPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
+D IG + A +F G+ +S Q+ G+ DL
Sbjct: 123 GFDSIGCIDFAKDFIVSGT------------------ASDQLFGTCEGLWEPDLG----- 159
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
P E V A A +RD +G G H+ I KD
Sbjct: 160 ----------------------P---EDLFETVSQALLNAVDRDALSGWGAHVYIIEKDK 194
Query: 251 IKEYNFPLRKD 261
+ + R+D
Sbjct: 195 VTKRLLKGRQD 205
>gi|118431082|ref|NP_147287.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121727671|sp|Q9YES4.2|PSB1_AERPE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|116062408|dbj|BAA79472.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 203
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-----TITI 78
G T + + D ++A+D R+S G I +R K+F R F ++ + I
Sbjct: 5 GATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIF-VINDRIGIAFAGLYGDMGGLVRI 63
Query: 79 LPFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ QM L E K + ++AK +S ++Y +FFP+ I+ G+DP G+ +Y DP+
Sbjct: 64 VEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDPGGEPKLYVLDPL 123
Query: 137 GHTERANFRAGGSSGALLQALLDN 160
G ++ A G+ LL++
Sbjct: 124 GSIIEEDYVAAGTGATTAFGLLEH 147
>gi|167522269|ref|XP_001745472.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775821|gb|EDQ89443.1| predicted protein [Monosiga brevicollis MX1]
Length = 211
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH----YYYRP-------TYNFL 71
NG VA+ G IA+D RL A + KLF + P T++
Sbjct: 14 NGSAMVAMTGKGCIAIAADRRLGAQAQTVATDFQKLFQMGPTLFVGLPGLATDVQTFSQR 73
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+ F + ++Y + + +L +IS M+Y KRF PY+ +IAGLD +G+ V
Sbjct: 74 LTFKL-----KLYKLREERDIEPKALTNLISSMLYEKRFGPYFIEPLIAGLDKDGQPYVA 128
Query: 132 SYDPIGH-TERANFRAGGSS 150
S D IG E +F GG+S
Sbjct: 129 STDVIGCPMETTDFVVGGTS 148
>gi|212537589|ref|XP_002148950.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068692|gb|EEA22783.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 171
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 15/170 (8%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
SP+ NGG VA+ G D IA D RL + K+F+ Y TY +
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFN--YAPSTYLGITGLATD 60
Query: 73 IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKG 128
+ T++ L MY + +S +LA ++S +Y +RF PY+ S +IAG++ GK
Sbjct: 61 VTTVSDLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKP 120
Query: 129 CVYSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLG 177
+ +D IG + A +F G++ L G+ + +++S+LG
Sbjct: 121 FICGFDSIGCIDFAKDFIVSGTAS---DQLFGTCEGLWEPDLVRLRSLLG 167
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 55/232 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHY---YYRPTYNFLMIFTIT 77
G TTV V D + A++ R S G I + K+F DH + +
Sbjct: 9 GTTTVGVTCKDGIVFATERRASMGNLIAHKVADKIFKIDDHIGATIAGSVSDAQKLMGYI 68
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+Y + MS + A M S +++ RF+PYY T++ G+D +G ++S DP G
Sbjct: 69 SAEVALYRLRNGAPMSVEAAANMTSNILHASRFYPYYVQTLLGGVDEKGP-ALFSLDPSG 127
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+ + GS + +L+++
Sbjct: 128 GVIKDLMISTGSGSPVAYGVLEDRY----------------------------------- 152
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
NQE + +E+ SVV A AA ERD Y+G+G+ + ITK+
Sbjct: 153 -------NQE------MDIEEGTSVVIRAIKAAMERDTYSGNGIKVATITKE 191
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 94/236 (39%), Gaps = 56/236 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL- 79
G TTV + D ++A+D R S G +Y + +K++ + N I ++ L
Sbjct: 7 GTTTVGIVCRDGVVLAADRRASLGNMVYAKNVTKIYQIDERLAIAGAGNVGDILSLVRLL 66
Query: 80 --PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
++Y + MS +LA +++ ++ G R+FPY ++ G D + +YS D G
Sbjct: 67 RAEVRLYRSRVGRSMSAKALATLLANILNGTRYFPYLVWFLVGGYDDAPR--LYSVDMAG 124
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+ A GS ++LD+Q
Sbjct: 125 GITEDKYVAAGSGMEFAFSILDSQY----------------------------------- 149
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
K + +E+ + + A +A +RD++TG+G+ + IT+ G +E
Sbjct: 150 -------------KPEMSVEEGVKLAVRAINSAIKRDVFTGEGITVVTITEKGYRE 192
>gi|302348749|ref|YP_003816387.1| proteasome beta subunit [Acidilobus saccharovorans 345-15]
gi|302329161|gb|ADL19356.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
Length = 207
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 97/250 (38%), Gaps = 55/250 (22%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF-DHYYYRPTYNFLMIFT 75
S Y GT V V D ++A+D R++ G + +R K+F + + L
Sbjct: 1 MSAYEIEQGTAVGVKAKDGVVLATDKRMAYGSFVMSRNAKKVFLINNRAAIAMSGLYADV 60
Query: 76 ITILPF-----QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
IL + + Y + MS +++K++S ++Y + P+ ++ G+D +G+ +
Sbjct: 61 GAILRYLTAESKYYELTEERTMSLYAISKLLSGILYSYKMLPFIIEALVGGIDRDGQPKI 120
Query: 131 YSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
Y+ D +G + A GS
Sbjct: 121 YTLDSLGSVSEDKYMAVGSGA--------------------------------------- 141
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
T LGF + D + L++A V A + ERD TGDG+ + +I+ G
Sbjct: 142 -------TTALGFLEDQYND--ALSLDQAEQVAVGALRISMERDASTGDGIDVISISTSG 192
Query: 251 -IKEYNFPLR 259
+KE + LR
Sbjct: 193 AVKEKSLRLR 202
>gi|402077481|gb|EJT72830.1| proteasome component PUP3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 205
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFT 75
SP+S NGG VA+ G D IA D RL + K+F + + T + T
Sbjct: 3 SPFSINGGAAVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGDVFLGLTGLATDVST 62
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
++ L MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ + +
Sbjct: 63 VSDLFRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTSQPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 123 GFDSIGCIDFAKDFIVSGTASEQLFGMCES 152
>gi|67481017|ref|XP_655858.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56473029|gb|EAL50477.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407034951|gb|EKE37462.1| proteasome subunit beta type 3, putative [Entamoeba nuttalli P19]
gi|449704564|gb|EMD44784.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 205
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 88/245 (35%), Gaps = 54/245 (22%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
+GG V +AG IA+D R Y + K+F Y + + + +
Sbjct: 9 SGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAEK 68
Query: 83 MYLH------EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ H + L + M+Y KRF PYY S IIAG+D G V SYD I
Sbjct: 69 VKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYI 128
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G E + QVG + S ++ +
Sbjct: 129 GSPEIS------------------QVGCVGTGSNELMGMC-------------------- 150
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
++ K + E+ + V AA RD ++G GV + +T+D + YN
Sbjct: 151 ----------DSFYKEGMEPEELVEAVGQCLLAAENRDAFSGWGVEVYLLTRDNLTIYNM 200
Query: 257 PLRKD 261
R+D
Sbjct: 201 KPRQD 205
>gi|320590790|gb|EFX03233.1| proteasome component [Grosmannia clavigera kw1407]
Length = 206
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIF 74
SP+S NGG VA+ G D IA D RL + K+F D+ + T +
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKVFQYGDNVFLGLTGLATDVN 62
Query: 75 TITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCV 130
T++ L +Y + ++ + A ++S +Y +RF P++ S ++AGL+P+ G+ +
Sbjct: 63 TVSDLFRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLEPKTGQPFI 122
Query: 131 YSYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 123 CGFDSIGCIDFARDFIVSGTASEQLFGMCES 153
>gi|242018983|ref|XP_002429948.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212514994|gb|EEB17210.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 190
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTIT 77
S NGG VAV G + IASD R G + K+F+ H Y L T T
Sbjct: 5 SHNGGAVVAVTGKNCVAIASDRRFGVGAQTISCNFQKIFEMGPHLYV--GLPGLATDTQT 62
Query: 78 I---LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVY 131
+ L F++ L+E + ++ + + M+S ++Y +RF PY+ ++AGLDP GK V
Sbjct: 63 VYQRLRFRLNLYELKEGRKIAPKTFSHMMSNLLYERRFGPYFVEPVVAGLDPTTGKPFVC 122
Query: 132 SYDPIG 137
+ D IG
Sbjct: 123 NMDLIG 128
>gi|389626557|ref|XP_003710932.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
gi|351650461|gb|EHA58320.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
Length = 206
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH---YYYRPTYNFLMIF 74
SP+S NGG VA+ G D IA D RL + K+F + + T +
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSYSSSVFLGLTGLATDVA 62
Query: 75 TITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCV 130
T++ L MY + ++ + A ++S +Y +RF PY+ S ++AGL+P+ G +
Sbjct: 63 TVSDLFRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLEPKTGAPFI 122
Query: 131 YSYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASEQLFGMCES 153
>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
gi|302595750|sp|A9A788.1|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595838|sp|A6VK02.1|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 219
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 93/239 (38%), Gaps = 55/239 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV + D ++A+D R + G I +E KL+ D Y + + +
Sbjct: 14 GTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLI 73
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
++Y M+ S +IS +++G R +P T I+ G D ++S DP+G
Sbjct: 74 SAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSLDPVG 133
Query: 138 H-TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
E ++F A GS +L+ +
Sbjct: 134 GINEESSFTATGSGSPTAYGVLEAEY---------------------------------- 159
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
++ V ++K + V A ++A +RD Y+G+G+ L I KDG+ Y+
Sbjct: 160 --------------RSDVTIDKGLLVAVKALSSAMQRDAYSGNGISLAHINKDGVNIYS 204
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 93/236 (39%), Gaps = 56/236 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL- 79
G TTV + D ++A+D R S G +Y R +K+ +H + I + L
Sbjct: 7 GTTTVGIVCKDGVVLAADRRASLGNIVYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 66
Query: 80 --PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
++Y + + MS +LA +++ ++ G ++FPY ++ G D + + +YS D +G
Sbjct: 67 RAEAKLYYAQFGREMSARALATLLANILNGYKYFPYMAWFLVGGYDEKAR--LYSVDAVG 124
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+ A GS ++LD +
Sbjct: 125 GITEDKYMAAGSGMEFAYSILDAEY----------------------------------- 149
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
+ +++ + + A A +RD+++GDG+ + ITK+G E
Sbjct: 150 -------------SDDITVKEGVKLAVKAINTAIKRDVFSGDGILVVTITKEGYSE 192
>gi|308160496|gb|EFO62983.1| Proteasome subunit beta type 3 [Giardia lamblia P15]
Length = 207
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYN---------IYTREQSKLFDHYYYRPTYNFLMI 73
NG + + G D +A+D RL Y I+ QS L + + L
Sbjct: 8 NGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQT--DVLTT 65
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+ + +Y + ++ + + AKMIS +Y RF PY+ S IIAG + +GK + +
Sbjct: 66 YRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAM 125
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLDNQV 162
D IG + NF+ G++ L L + V
Sbjct: 126 DTIGCLDDCTNFQIAGTASDFLLGLCETHV 155
>gi|242808757|ref|XP_002485230.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
gi|218715855|gb|EED15277.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
Length = 206
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
SP+ NGG VA+ G D IA D RL + K+F+ Y TY L
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFN--YAPSTYLGLTGLATD 60
Query: 73 IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKG 128
+ T++ L MY + +S +LA ++S +Y +RF PY+ S +IAG++ GK
Sbjct: 61 VTTVSDLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKP 120
Query: 129 CVYSYDPIGHTERA 142
+ +D IG + A
Sbjct: 121 FICGFDSIGCIDFA 134
>gi|451848501|gb|EMD61806.1| hypothetical protein COCSADRAFT_38618 [Cochliobolus sativus ND90Pr]
Length = 205
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 55/251 (21%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFT 75
SP+S NGG VA+ G D IA D RL + K+F + + T + T
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGDVFLGLTGLATDVST 62
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVY 131
++ L MY + +S ++A ++S +Y +RF PY+ S +IAG++ GK +
Sbjct: 63 VSDLFRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
+D IG + A +F G+ +S Q+ G+ DL
Sbjct: 123 GFDSIGCIDFAKDFIVSGT------------------ASDQLFGTCEGLWEPDLG----- 159
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
P L + IS A A +RD +G G H+ I KD
Sbjct: 160 ----------------------PEDLFETIS---QALLNAVDRDALSGWGAHVYIIEKDK 194
Query: 251 IKEYNFPLRKD 261
+ + R+D
Sbjct: 195 VTKRLLKGRQD 205
>gi|159110825|ref|XP_001705654.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
gi|157433742|gb|EDO77980.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
Length = 207
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYN---------IYTREQSKLFDHYYYRPTYNFLMI 73
NG + + G D +A+D RL Y I+ QS L + + L
Sbjct: 8 NGSALIGIKGKDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQT--DVLTT 65
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+ + +Y + ++ + + AKMIS +Y RF PY+ S IIAG + +GK + +
Sbjct: 66 YRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAM 125
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLDNQV 162
D IG + NF+ G++ L L + V
Sbjct: 126 DTIGCLDDCTNFQIAGTASDFLLGLCETHV 155
>gi|114052162|ref|NP_001040460.1| proteasome beta 3 subunit [Bombyx mori]
gi|95102980|gb|ABF51431.1| proteasome beta 3 subunit [Bombyx mori]
Length = 205
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH----YYYRPTYNFLMIFTITI 78
NGG VA+ G D IA+D R + K+F Y P
Sbjct: 7 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVYSYDP 135
L F+M L+E N++M + + M+S ++Y +RF PY+ +IAGLDP + + V + D
Sbjct: 67 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 126
Query: 136 IGH-TERANFRAGGSSGALLQALLD 159
IG E +F G+ L + +
Sbjct: 127 IGCPNEPEDFVVSGTCSEQLYGMCE 151
>gi|407463311|ref|YP_006774628.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046933|gb|AFS81686.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 210
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 55/235 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGY---NIYTREQSKLFDHYYYRPTYNFLMIFTIT-IL 79
G TTV + D ++ +D R SAGY N T + K+ DH I IL
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDIL 71
Query: 80 PFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ LH E + +S SLA++ S++ + R +P+ ++ G D EG +++ D G
Sbjct: 72 RYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDTEGP-ALFNIDMFG 130
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
E+ ++ GS + LL+ +
Sbjct: 131 SVEKKSYVTTGSGSPVAYGLLEEEY----------------------------------- 155
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
K + +E+A + A AA R+I TGDG+++ + KDG +
Sbjct: 156 -------------KEDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVMDKDGFR 197
>gi|448536903|ref|XP_003871223.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis Co
90-125]
gi|380355579|emb|CCG25098.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis]
Length = 245
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 9 LETPIQHHFSPYSD----NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYY 64
L P QH++ P SD NGG VA+ G D IASD RL + + K+F+ +
Sbjct: 29 LYLPTQHNYVPMSDPFSINGGAAVAMIGKDCVAIASDLRLGSQSLGVSNNFEKVFE--FG 86
Query: 65 RPTYNFLMIFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTS 116
TY L ++ + +Y + + ++LA ++S +Y +RF P++
Sbjct: 87 DKTYMALTGLATDVITLRELFKFKTNLYKLREERSIEPSTLANLVSSSLYERRFGPWFVG 146
Query: 117 TIIAGLDP-EGKGCVYSYDPIG 137
I+AGL + K + +D IG
Sbjct: 147 PIVAGLSSKDNKPFICGFDSIG 168
>gi|17380218|sp|Q9N9W8.1|PSB3_GIALA RecName: Full=Proteasome subunit beta type-3
gi|9367751|emb|CAB97490.1| 20S proteasome subunit [Giardia intestinalis]
Length = 207
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYN---------IYTREQSKLFDHYYYRPTYNFLMI 73
NG + + G D +A+D RL Y I+ QS L + + L
Sbjct: 8 NGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQT--DVLTT 65
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+ + +Y + ++ + + AKMIS +Y RF PY+ S IIAG + +GK + +
Sbjct: 66 YRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAM 125
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLDNQV 162
D IG + NF+ G++ L L + V
Sbjct: 126 DTIGCLDDCTNFQIAGTASDFLLGLCETHV 155
>gi|224063046|ref|XP_002300970.1| predicted protein [Populus trichocarpa]
gi|118487526|gb|ABK95590.1| unknown [Populus trichocarpa]
gi|222842696|gb|EEE80243.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 98/253 (38%), Gaps = 59/253 (23%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYT-----REQSKLFDHYYYRPT---YN 69
S + NG VA+ G + IASD RL G N+ T + K+ D + + +
Sbjct: 2 SIFEYNGSAIVAMVGKNCFAIASDRRL--GVNLQTVATDFQRIYKIHDKLFVGLSGLGTD 59
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
++ + +MY + M + A ++S ++Y KRF PY+ +IAGLD + K
Sbjct: 60 AQTLYQRLVFRHKMYQLREERDMKPETFANLVSAVLYEKRFGPYFCQPVIAGLDDDDKPF 119
Query: 130 VYSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
+ + D IG E A +F GS+ +S+ G
Sbjct: 120 ICTMDFIGAKELAKDFVVAGSAS---------------------ESLYGAC--------- 149
Query: 189 EINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
E K + ++ VV A A+ +RD +G G H+ +T
Sbjct: 150 ------------------EAFFKPDMEPDELFEVVSQALLASVDRDCLSGWGGHIYIVTP 191
Query: 249 DGIKEYNFPLRKD 261
D IKE R D
Sbjct: 192 DDIKEKILKGRMD 204
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 100/246 (40%), Gaps = 60/246 (24%)
Query: 21 SDN----GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL--- 71
SDN G TTV +A D ++A++ R + G I ++ K++ D T +
Sbjct: 3 SDNQHLKGTTTVGIACSDAVVLATERRATMGNFIASKTAKKIYQIDDRIGMTTAGSVGDA 62
Query: 72 -MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
I I + +++ N+ ++ + ++S ++ G+R+FP I+ G+D G +
Sbjct: 63 QQIVRIISVESKLFKMRRNEPITIKGITTLLSNLLSGQRYFPLMVQLIVGGVDKTGPN-M 121
Query: 131 YSYDPI-GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
YS DP+ G E N A GS + LL+++ K M S G
Sbjct: 122 YSLDPLGGRIEETNIVATGSGSPITYGLLEDRY------HKDMTSDEGA----------- 164
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
E AI + +A +RD +GDG+ + ITKD
Sbjct: 165 ---------------------------ELAIRALHNAM----KRDSASGDGIDVVVITKD 193
Query: 250 GIKEYN 255
G K+ +
Sbjct: 194 GYKQLD 199
>gi|167043167|gb|ABZ07876.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_ANIW141J13]
Length = 208
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 55/235 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGY---NIYTREQSKLFDHYYYRPTYNFLMIFTIT-IL 79
G TTV + D ++ +D R SAGY N T + K++DH +T IL
Sbjct: 10 GTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYDHVGLTLAGGVADAQNLTDIL 69
Query: 80 PFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ +H + N+ + SLA++ S++ + R +P+ ++ G D +G +++ D G
Sbjct: 70 RYHANVHAVQKNENIPIKSLARLCSLVFHQNRGYPFIADILLGGYDRDGP-ALFNIDMFG 128
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
E+ ++ GS + +L+++
Sbjct: 129 SVEKKSYVTTGSGSPVAYGVLEDE------------------------------------ 152
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+R+ + LE A + A AA R+I TGDG+++ AI K+G +
Sbjct: 153 -----YRDD-------LTLEDAKLIALRAVKAAIVRNIGTGDGINIAAINKNGFQ 195
>gi|401825340|ref|XP_003886765.1| proteasome beta type-3 subunit [Encephalitozoon hellem ATCC 50504]
gi|392997921|gb|AFM97784.1| proteasome beta type-3 subunit [Encephalitozoon hellem ATCC 50504]
Length = 206
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 18/152 (11%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF---TITILP 80
GG+ +A+A + I SD RL G ++E +++ H Y L +F T +L
Sbjct: 10 GGSVLAMASENAVAIMSDRRLGMGPITVSKEFTRI--HKIGPRLYVGLPVFIPDTQVLLK 67
Query: 81 -----FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDP 135
+ ++ E + M L+ MIS ++Y KR PY TS I+AGL +GK V S D
Sbjct: 68 KIRKNYNLFRLEEQREMEPEELSSMISFLLYSKRTSPYITSPIVAGLTSDGKPYVSSMDS 127
Query: 136 IGH-TERANFRAGGSSGALLQALLDNQVGIIQ 166
IG T +F A G++G DN +GI +
Sbjct: 128 IGSITSPKDFVAAGTAG-------DNLIGICE 152
>gi|167045028|gb|ABZ09692.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG8G15]
Length = 210
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 55/235 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGY---NIYTREQSKLFDHYYYRPTYNFLMIFTIT-IL 79
G TTV + D ++ +D R SAGY N T + K++DH +T IL
Sbjct: 12 GTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYDHVGLTLAGGVADAQNLTDIL 71
Query: 80 PFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ +H + N+ + SLA++ S++ + R +P+ ++ G D +G +++ D G
Sbjct: 72 RYHANIHAVQKNENIPIRSLARLCSLVFHQNRGYPFIADILLGGYDQDGP-QLFNIDMFG 130
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
E+ ++ GS + +L+++
Sbjct: 131 SVEKKSYVTTGSGSPVAYGVLEDE------------------------------------ 154
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+R+ + LE A + A AA R+I TGDG+++ AI K+G +
Sbjct: 155 -----YRDD-------LTLEDAKGIALRAVKAAIVRNIGTGDGINIAAIDKNGFQ 197
>gi|408404298|ref|YP_006862281.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364894|gb|AFU58624.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 201
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 99/244 (40%), Gaps = 60/244 (24%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQM 83
G T V ++ + I+A++ R+S G + + K F + M+ + +L Q+
Sbjct: 8 GATVVGISYNNGVILAAEKRVSFGNFVVNKNIKKTFSVTDHVGAACAGMVADMQVLVRQV 67
Query: 84 YLH------EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD--PEGKGCVYSYDP 135
E + ++ S+AK++S++M+ +R+FP T I+ G++ PE +Y+ DP
Sbjct: 68 EALAKIRKLETRRDVAPNSIAKLMSVIMFERRYFPLLTQVIVGGINTKPE----IYTLDP 123
Query: 136 IGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSS 195
+G ++ A G+ + ++D +
Sbjct: 124 LGSVLPDDYAAVGTGAEMALGIMDAEF--------------------------------- 150
Query: 196 KLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
K + EKA + A +A +RD +GDG+ + +++ G +E
Sbjct: 151 ---------------KPNMTEEKAKELAVRAIRSAIQRDAASGDGIDVLVVSRTGHREET 195
Query: 256 FPLR 259
P+R
Sbjct: 196 IPIR 199
>gi|403223804|dbj|BAM41934.1| proteasome subunit beta type [Theileria orientalis strain Shintoku]
Length = 206
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQS------KLFDHYYYRPTYNFLMIFTI 76
NGG VA+ G IA D RL G+N S K+ D+ ++ + I T+
Sbjct: 8 NGGAVVAMMGEGCVAIACDKRL--GFNQQITVGSNFPKAFKVTDNCFFAASGLATDIQTL 65
Query: 77 T---ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+ MY K M+ +L+ M+ M+Y KRF P++ ++IAGLD + + + +
Sbjct: 66 KDEIMFKVNMYQMRGEKQMNVKTLSNMVGTMLYSKRFGPWFVDSVIAGLDSKNEPYITCF 125
Query: 134 DPIG 137
D +G
Sbjct: 126 DLVG 129
>gi|212537585|ref|XP_002148948.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068690|gb|EEA22781.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 206
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHY---YYRPTYNFLMIF 74
SP+ NGG VA+ G D IA D RL + K+F++ Y T +
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVT 62
Query: 75 TITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCV 130
T++ L MY + +S +LA ++S +Y +RF PY+ S +IAG++ GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFI 122
Query: 131 YSYDPIGHTERA 142
+D IG + A
Sbjct: 123 CGFDSIGCIDFA 134
>gi|253744760|gb|EET00912.1| Proteasome subunit beta type 3 [Giardia intestinalis ATCC 50581]
Length = 207
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYN---------IYTREQSKLFDHYYYRPTYNFLMI 73
NG + + G D +A+D RL Y I+ QS L + + L
Sbjct: 8 NGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQT--DVLTT 65
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+ + +Y + ++ + + AKMIS +Y RF PY+ S IIAG + +GK + +
Sbjct: 66 YRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAM 125
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLDNQV 162
D IG + NF+ G++ L L + +
Sbjct: 126 DTIGCLDDCTNFQIAGTASDFLLGLCEAHI 155
>gi|168037918|ref|XP_001771449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677176|gb|EDQ63649.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTI-TI 78
NG +A+ G D IASD RL + + ++F DH Y + + T+
Sbjct: 7 NGSALIAMVGKDCFAIASDRRLGVNFQTIACDFQRIFKIHDHLYIGLSGLATDVQTMHQR 66
Query: 79 LPF--QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
L F ++Y + M + A ++S M+Y KRF PY+ IIAGL+ +G + + D I
Sbjct: 67 LNFRHKLYQLREERNMRPETFASLVSAMLYEKRFGPYFCEPIIAGLNDDGTPFICTTDLI 126
Query: 137 GHTERA-NFRAGGSSGALL 154
G + A +F G++ L
Sbjct: 127 GAKQLAKDFVVSGTASESL 145
>gi|167393450|ref|XP_001740580.1| proteasome subunit beta type-3 [Entamoeba dispar SAW760]
gi|165895272|gb|EDR23004.1| proteasome subunit beta type-3, putative [Entamoeba dispar SAW760]
Length = 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 88/245 (35%), Gaps = 54/245 (22%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
+GG V +AG IA+D R Y + K+F Y + + + +
Sbjct: 9 SGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAEK 68
Query: 83 MYLH------EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ H + L + M+Y KRF PYY S IIAG+D G V SYD I
Sbjct: 69 VKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYI 128
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G E + +VG + S ++ +
Sbjct: 129 GSPEIS------------------RVGCVGTGSNELMGMC-------------------- 150
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
++ K + E+ + V AA RD ++G GV + +T+D + YN
Sbjct: 151 ----------DSFYKEGMEPEELVEAVGQCLLAAENRDAFSGWGVEVYLLTRDNLTIYNM 200
Query: 257 PLRKD 261
R+D
Sbjct: 201 KPRQD 205
>gi|326426453|gb|EGD72023.1| proteasome subunit beta type-3 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH----YYYRPTYNFLMIFTITI 78
NG VA+ G + IA+D RL A + + K+F + P I
Sbjct: 7 NGSAVVAMTGKECVAIAADRRLGAQAQTVSTDFQKVFQMGPKLFVGLPGLGTDAITVSQR 66
Query: 79 LPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
L F+ MY + + ++ ++S +Y +RF PY+ ++AGLD + + V S D I
Sbjct: 67 LKFRLNMYTLREERDIEPKTMINLVSSFLYERRFGPYFVEPVVAGLDSKNQPYVASTDLI 126
Query: 137 GH-TERANFRAGGSSGALLQALLDN 160
G E ++F GG+S L + ++
Sbjct: 127 GCPMETSDFVVGGTSSEQLYGMCES 151
>gi|170030525|ref|XP_001843139.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
gi|167867380|gb|EDS30763.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
Length = 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTI-TI 78
NGG VA+ G + IA+D R + K+F+ H Y I T+
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKIFEINPHMYLGLVGLQTDILTVHQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F+ L+E N+ M+ A M+S +Y KRF PY+ +IAGLDP+ + + + D
Sbjct: 67 LLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKSYEPFICNMDL 126
Query: 136 IGHTERAN-FRAGGSSGALLQALLD 159
IG + N F G+ L + +
Sbjct: 127 IGCPNKPNDFVVAGTCAEQLYGMCE 151
>gi|145256886|ref|XP_001401548.1| proteasome component PUP3 [Aspergillus niger CBS 513.88]
gi|134058458|emb|CAL00667.1| unnamed protein product [Aspergillus niger]
gi|358366039|dbj|GAA82660.1| proteasome component Pup3 [Aspergillus kawachii IFO 4308]
Length = 206
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
SP+ NGG VA+ G D IA D RL + K+F+ Y P+ FL
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFN---YGPS-TFLGLTGLA 58
Query: 73 --IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EG 126
+ T++ L MY + ++ +LA ++S +Y KRF P++ S +IAG++ G
Sbjct: 59 TDVSTVSDLFRYKVNMYRLREERNIAPQTLANLVSSSLYEKRFGPFFVSPVIAGINSTTG 118
Query: 127 KGCVYSYDPIGHTERA 142
K + +D IG + A
Sbjct: 119 KPFICGFDSIGCIDFA 134
>gi|124028410|ref|YP_001013730.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
gi|302595717|sp|A2BN24.1|PSB1_HYPBU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|123979104|gb|ABM81385.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
Length = 204
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 14/206 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY------NFLMIFTI 76
G T V + G Y ++A++ R+S G I ++ K++ Y + I I
Sbjct: 7 TGATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADLQAISKI 66
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ Y + +S ++A++++ ++Y +++P+ + T++ GL+ +G +Y DP+
Sbjct: 67 LRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKLYVMDPL 126
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G ++ A GS + +L+N K + +R A+ R +A+S
Sbjct: 127 GSLIEDDYAAIGSGAPIAIGILENGYSKDMSVDDAKKLAIAAVRA---AIER--DAMSGD 181
Query: 197 LTILLGFRNQENVDKTPVPLEKAISV 222
LL R +E+ K E++I++
Sbjct: 182 GIDLLVIRREEDSIKAE---EESITI 204
>gi|296425517|ref|XP_002842287.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638550|emb|CAZ86478.1| unnamed protein product [Tuber melanosporum]
Length = 593
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFT 75
+P+S NGG VA+ G D IA D RL + + K+F++ Y T + +
Sbjct: 391 NPFSINGGAVVAMVGKDCVAIACDLRLGMQALTVSNDFPKIFNYGDVYLGLTGLATDVTS 450
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVY 131
++ L MY + + ++A ++S +Y KRF PY+ S +IAG++ GK +
Sbjct: 451 VSELFRYKVNMYRLREERDIEPQTMANLVSSSLYEKRFGPYFVSPVIAGINQHSGKPFIC 510
Query: 132 SYDPIG 137
+D IG
Sbjct: 511 GFDSIG 516
>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 204
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 55/236 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTIT 77
G T V + D ++A++ R++ G+ + K++ D + I I
Sbjct: 8 GATAVGIKAKDGVVLAAEKRITYGFYSLSSSGKKVYVVNDRMALASAGVIADMQTIAKIL 67
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ +MY E + S ++AK++S++M+ +R P+ ++ G D EG ++ DP+G
Sbjct: 68 RVNAKMYELESRRKPSIAAMAKLLSVIMFNRRIMPFIAEVLVGGYDEEGP-HIFVLDPVG 126
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
++ A G+ + ++LD + SK + D++ R KL
Sbjct: 127 SLIEDDYAALGTGAKMAISILD------ANYSKDV----------DVSGAR-------KL 163
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
I +A AA ERD +G G+ L +T DG+ E
Sbjct: 164 AI-------------------------NAIRAALERDPVSGGGIDLVTVTADGVSE 194
>gi|224014869|ref|XP_002297096.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968215|gb|EED86564.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 204
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTI-TI 78
NG +A++G D IASD R+ Y + + K+F + + + T+ +
Sbjct: 7 NGAAIIAMSGKDCVGIASDNRMGISYQTVSMDFKKIFQMNEKLFVGLAGLASDVQTLDQL 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
L F+M L+E + M+ ++S M+Y KRF PY+ ++AGLD K + + D I
Sbjct: 67 LRFRMNLYELREEREMTPKVFTNLLSNMLYEKRFGPYFAEPVVAGLDENDKPYLATMDLI 126
Query: 137 GHT 139
G T
Sbjct: 127 GAT 129
>gi|417397057|gb|JAA45562.1| Putative proteasome subunit beta type-3 [Desmodus rotundus]
Length = 205
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NGG +A+ G D IA+D R + T + K+F D Y + T+
Sbjct: 7 NGGAVMAMKGKDCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K + S D
Sbjct: 67 LKFRLNLYELKEGRPIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 136 IG 137
IG
Sbjct: 127 IG 128
>gi|312378864|gb|EFR25317.1| hypothetical protein AND_09469 [Anopheles darlingi]
Length = 205
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPT---YNFLMIFTI 76
NGG VA+ G + IA+D R + K+F+ H Y + L ++
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDILTVYQR 66
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
I +Y N+ M+ A M+S +Y KRF PY+ +IAGLDP+ + + + D
Sbjct: 67 LIFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKTYEPFICNMDL 126
Query: 136 IGHTERAN-FRAGGSSGALLQALLD 159
IG N F G+ L + +
Sbjct: 127 IGCPNLPNDFVVAGTCAEQLYGMCE 151
>gi|444323175|ref|XP_004182228.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
gi|387515275|emb|CCH62709.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
Length = 205
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLMIFTI 76
P S NGG VA+ G D IA D RL + + K+F H ++ T + T+
Sbjct: 4 PSSINGGVVVAMTGKDCVAIACDLRLGSQSLGVSNNFEKIFHYGHVFFGITGLATDVTTL 63
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
L MY + N+ + + ++S +Y KRF PY+ ++AGL+ + GK +
Sbjct: 64 NELFRYKTNMYKLKENRSIEPETFTNLVSSTLYSKRFGPYFVGPVVAGLNSKTGKPYIAG 123
Query: 133 YDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 124 FDLIGCIDEAKDFIVSGTASDQLFGMCES 152
>gi|451992642|gb|EMD85122.1| hypothetical protein COCHEDRAFT_1149474 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 99/251 (39%), Gaps = 55/251 (21%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFT 75
SP+S +GG VA+ G D IA D RL + K+F + + T + T
Sbjct: 3 SPFSIDGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGDVFLGLTGLATDVST 62
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVY 131
++ L MY + +S ++A ++S +Y +RF PY+ S +IAG++ GK +
Sbjct: 63 VSDLFRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
+D IG + A +F G+ +S Q+ G+ DL
Sbjct: 123 GFDSIGCIDFAKDFIVSGT------------------ASDQLFGTCEGLWEPDLG----- 159
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
P L + IS A A +RD +G G H+ I KD
Sbjct: 160 ----------------------PEDLFETIS---QALLNAVDRDALSGWGAHVYIIEKDK 194
Query: 251 IKEYNFPLRKD 261
+ + R+D
Sbjct: 195 VTKRLLKGRQD 205
>gi|344232930|gb|EGV64803.1| proteasome-domain-containing protein [Candida tenuis ATCC 10573]
gi|344232931|gb|EGV64804.1| hypothetical protein CANTEDRAFT_113576 [Candida tenuis ATCC 10573]
Length = 205
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT- 77
P S NGG+ VA+ G D IA D RL + K+F T N ++ +T
Sbjct: 4 PSSINGGSAVAMVGKDCVAIACDLRLGSQSLGLANNFEKIF-------TINDKVMLGLTG 56
Query: 78 ----------ILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ F+ L+E + + + A ++S +Y KRF PY+ ++AGL+ E
Sbjct: 57 LATDVTTLNEVFRFKNNLYELREERKIEPQTFANLVSSTLYEKRFGPYFCGPVVAGLNKE 116
Query: 126 GKGCVYSYDPIGHTERA-NFRAGGSSGALLQALLDN 160
K + +D IG + A +F G++ L + ++
Sbjct: 117 NKPFICGFDLIGCIDFAKDFIVSGTASEQLYGMCES 152
>gi|357016905|gb|AET50481.1| hypothetical protein [Eimeria tenella]
Length = 236
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKL 58
F+PY +NGGT V VAG D+ I DTRLS GY+I++R SK+
Sbjct: 29 FNPYVNNGGTVVCVAGEDFVIGVGDTRLSVGYSIHSRHHSKI 70
>gi|198423327|ref|XP_002125759.1| PREDICTED: similar to LOC496005 protein [Ciona intestinalis]
Length = 205
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NGG VA+ G + IASD R + K+F + Y T + T++
Sbjct: 7 NGGAVVAMKGKNCVAIASDLRFGIQAQTVGMDFEKIFPMSERLYIGLTGLATDVQTVSQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
L FQ+ L+E N+ +S + ++S ++Y KRF PY+ +IAGLDP+ K
Sbjct: 67 LQFQLKLYELRENRQISPKTFLSVVSNLLYEKRFGPYFIEPVIAGLDPKTK 117
>gi|410084182|ref|XP_003959668.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
gi|372466260|emb|CCF60533.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
Length = 205
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 55/250 (22%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLMIFTI 76
P S NGG VA+AG D IA D RL + + K+F +H ++ T + T+
Sbjct: 4 PSSINGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFNYEHVFFGITGLATDVTTL 63
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
+ +Y + ++ + + A+++S +Y +RF PY+ ++AG++ + GK +
Sbjct: 64 NEVFRYKTNLYKLKEDRAIEPETFAQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAG 123
Query: 133 YDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
+D IG + A +F G+ +S Q+
Sbjct: 124 FDLIGCIDEAKDFIVSGT------------------ASDQL------------------- 146
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
F E++ + + E + A AA+RD +G G + I KD +
Sbjct: 147 -----------FGMCESLYEPNLEAEDLFETISQALLNAADRDALSGWGAVVYIIKKDKV 195
Query: 252 KEYNFPLRKD 261
+ N +R+D
Sbjct: 196 IKRNLRMRQD 205
>gi|119175342|ref|XP_001239915.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303314835|ref|XP_003067426.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240107094|gb|EER25281.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320037775|gb|EFW19712.1| proteasome component PUP3 [Coccidioides posadasii str. Silveira]
gi|392870109|gb|EAS27268.2| proteasome component PUP3 [Coccidioides immitis RS]
Length = 206
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 60/254 (23%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
SP+ NGG VA+ G D IA D RL + K+F+ Y TY L
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFN--YAPSTYLGLTGLATD 60
Query: 73 IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKG 128
+ +++ L +Y + ++ +LA ++S +Y KRF P++ S ++AG++ GK
Sbjct: 61 VASVSDLLRYKVNLYRLREERQIAPQTLANLVSSSLYEKRFGPWFVSPVLAGINHTTGKP 120
Query: 129 CVYSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
+ +D IG + A +F G+ +S Q+ + G+ DL
Sbjct: 121 FICGFDSIGCIDFAKDFIVSGT------------------ASDQLFGMCEGLWEPDLG-- 160
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
P L + IS A A +RD +G G H+ I
Sbjct: 161 -------------------------PEDLFETIS---QALLNAVDRDALSGWGAHVYIIE 192
Query: 248 KDGIKEYNFPLRKD 261
KD + + R+D
Sbjct: 193 KDKVTKRLLKGRQD 206
>gi|338710899|ref|XP_001501618.2| PREDICTED: proteasome subunit beta type-3-like [Equus caballus]
Length = 205
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|380022329|ref|XP_003695002.1| PREDICTED: proteasome subunit beta type-3-like [Apis florea]
Length = 205
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R T + K+F+ H Y + L T T+
Sbjct: 7 NGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYL--SLPGLATDTQTVM 64
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E N+ + + A M+S ++Y +RF PY+ IIAGL+P + + +
Sbjct: 65 EKLRFRLNLYELKENRKIHPKAFASMVSNLLYERRFGPYFVEPIIAGLNPNTYEPFICNM 124
Query: 134 DPIGHTERAN-FRAGGSSGALLQALLDN 160
D IG +N F GG+ L + ++
Sbjct: 125 DLIGCISPSNDFVVGGTCSEQLYGMCES 152
>gi|344285957|ref|XP_003414726.1| PREDICTED: proteasome subunit beta type-3-like [Loxodonta africana]
Length = 205
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IASD R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|358057136|dbj|GAA97043.1| hypothetical protein E5Q_03718 [Mixia osmundae IAM 14324]
Length = 204
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD----HYYYRP--TYNFLMIFTI 76
NGG+ +A+ G D IA D RL Q K+F Y P + L ++
Sbjct: 7 NGGSVIAMLGKDCVAIACDLRLGNQALTVACNQEKIFSITPTTYLGLPGLASDTLTVYEK 66
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
MY +++++ T+ ++S +Y +RF PY+ IIAGL+ +G V + D I
Sbjct: 67 LRHRTNMYAMREDRLITPTTFTHLVSSTLYERRFGPYFIEPIIAGLEADGTPFVATTDLI 126
Query: 137 GHTERA-NFRAGGSS 150
G A +F G++
Sbjct: 127 GCINAAKDFVVAGTA 141
>gi|238491746|ref|XP_002377110.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|317146166|ref|XP_001821334.2| proteasome component PUP3 [Aspergillus oryzae RIB40]
gi|220697523|gb|EED53864.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|391869220|gb|EIT78422.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Aspergillus oryzae 3.042]
Length = 206
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
SP+ NGG VA+ G D IA D RL + K+F+ Y P+ FL
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFN---YSPS-TFLGLTGLA 58
Query: 73 --IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EG 126
+ T++ L MY + ++ +LA ++S +Y +RF P++ S ++AG++ G
Sbjct: 59 TDVSTVSDLFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTG 118
Query: 127 KGCVYSYDPIGHTERA 142
K + +D IG + A
Sbjct: 119 KPFICGFDSIGCIDFA 134
>gi|295672716|ref|XP_002796904.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282276|gb|EEH37842.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 60/254 (23%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
S + NGG VA+ G D IA D RL + K+F+ Y TY L
Sbjct: 3 SVFDINGGACVAMIGKDCVAIACDLRLGLQALTVSNNFPKIFN--YAPSTYLGLTGLATD 60
Query: 73 IFTIT-ILPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL-DPEGKG 128
+ T++ +L F+ MY + +S +LA ++S +Y KRF PY+ S ++AG+ + G+
Sbjct: 61 VSTVSDVLRFKVNMYRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEP 120
Query: 129 CVYSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALT 187
+ +D IG + A +F G+ +S+Q+ G+ DL
Sbjct: 121 FICGFDSIGCIDFAKDFIVSGT------------------ASEQLFGTCEGLWEPDLG-- 160
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
P L + IS A A +RD +G G H+ I
Sbjct: 161 -------------------------PEDLFETIS---QALLNAVDRDALSGWGAHVYIIE 192
Query: 248 KDGIKEYNFPLRKD 261
KD + + R+D
Sbjct: 193 KDKVTKRLLKGRQD 206
>gi|171696000|ref|XP_001912924.1| hypothetical protein [Podospora anserina S mat+]
gi|170948242|emb|CAP60406.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFT 75
P +GG VA+ G D IA D RL + K+F D+ + T + T
Sbjct: 1 PPLPDGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDNVFLGLTGLATDVAT 60
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
++ L MY + ++ + A ++S +Y +RF P++ S ++AGLDP+ G+ +
Sbjct: 61 VSDLFRYKVNMYRLREERQIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGQPFIC 120
Query: 132 SYDPIGHTERA-NFRAGGSSG----ALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
+D IG + A +F G++ + ++L + +G Q +S+L + L+
Sbjct: 121 GFDSIGCIDFAKDFIVSGTATEQLFGMCESLWEPNLGPDQLFETISQSLLNAVDRDALS 179
>gi|167044620|gb|ABZ09292.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG7F19]
Length = 199
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQM 83
G T V + + + AS+ R++ G + ++ K F ++ + IL Q+
Sbjct: 8 GATAVGITYDEGVVFASERRIAYGNFVVSKTTKKTFVITPQVGAACAGLVADMQILSLQI 67
Query: 84 YL------HEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
E + + ++AKM+S MMY +RFFP T I+ GL K +Y+ DP+G
Sbjct: 68 SALAKIRKMEIKREVPPNTIAKMMSNMMYERRFFPLLTQVIVGGL--VDKPVIYTLDPLG 125
Query: 138 HTERANFRAGGSSGALLQALLDNQ 161
++ A G+ + +LD Q
Sbjct: 126 SVLPDDYAAVGTGAEMALGILDQQ 149
>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595719|sp|A9A2U7.1|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 210
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 91/235 (38%), Gaps = 55/235 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGY---NIYTREQSKLFDHYYYRPTYNFLMIFTIT-IL 79
G TTV + D ++ +D R SAGY N T + K+ DH I IL
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDIL 71
Query: 80 PFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ LH E + +S SLA++ S++ + R +P+ ++ G D EG +++ D G
Sbjct: 72 RYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDAEGP-ALFNIDMFG 130
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
E+ + GS + LL+ +
Sbjct: 131 SVEKKAYVTTGSGSPVAYGLLEEEY----------------------------------- 155
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+ + +E+A + A AA R+I TGDG+++ + KDG +
Sbjct: 156 -------------REDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAIMDKDGFR 197
>gi|47223967|emb|CAG06144.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R + T + K+F + Y + T++
Sbjct: 7 NGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVSQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+ + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 136 IGH-TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
IG E +F G+ S+QM + + D+ ++ S
Sbjct: 127 IGCPMETEDFVVSGT------------------CSEQMYGMCESLWEPDM-VSWTFLRRS 167
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEY 254
+ GFR + + E + A A +RD +G GV + I KD I
Sbjct: 168 DTTMMANGFRPAASRQEA----EDLFETISQAMLNAVDRDAVSGMGVVVHVIEKDKITTR 223
Query: 255 NFPLRKD 261
R D
Sbjct: 224 TLKARMD 230
>gi|388491852|gb|AFK33992.1| unknown [Lotus japonicus]
Length = 204
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + ++F D + + +
Sbjct: 2 SIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F GS+ L
Sbjct: 122 TMDCIGAKELAKDFVVAGSASESL 145
>gi|351706755|gb|EHB09674.1| Proteasome subunit beta type-3 [Heterocephalus glaber]
Length = 217
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT 67
P+ S S NGG +A+ G + IA+D R + T + K+F D Y
Sbjct: 7 VPMACDTSIMSYNGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLA 66
Query: 68 YNFLMIFTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
+ T+ L F++ L+E + + +L M++ ++Y +RF PYYT +IAGLDP
Sbjct: 67 GLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDP 126
Query: 125 EG-KGCVYSYDPIG 137
+ K + S D IG
Sbjct: 127 KTFKPFICSLDLIG 140
>gi|335345796|gb|AEH41478.1| proteasome component Pup3 [Endocarpon pusillum]
Length = 206
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 97/255 (38%), Gaps = 62/255 (24%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
SP+ NGG VA+ G IA D RL + K+F Y P+ +
Sbjct: 3 SPFDINGGACVAMVGKGCVAIACDLRLGLQSLTVSNNFPKIFQ---YAPSCYLGLTGLAT 59
Query: 73 -IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGK 127
+ T++ L MY + +S +LA ++S +Y +RF PY+ S ++AG++ GK
Sbjct: 60 DVSTVSDLFRYRVNMYRLREERNISPQTLANLVSSSLYERRFGPYFVSPVLAGINHTTGK 119
Query: 128 GCVYSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
+ +D IG + A +F GG+ +S Q+ G+ DL
Sbjct: 120 PFICGFDSIGCIDFAKDFIVGGT------------------ASDQLFGTCEGLWEPDLE- 160
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAI 246
++ V A A +RD +G G H+ I
Sbjct: 161 -----------------------------PDELFETVSQALLNAVDRDALSGWGAHVYII 191
Query: 247 TKDGIKEYNFPLRKD 261
KD + + R+D
Sbjct: 192 EKDKVTKRLLKGRQD 206
>gi|58395630|ref|XP_321394.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|347966404|ref|XP_003435908.1| AGAP001697-PB [Anopheles gambiae str. PEST]
gi|55233656|gb|EAA00889.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|333470074|gb|EGK97505.1| AGAP001697-PB [Anopheles gambiae str. PEST]
Length = 205
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPT---YNFLMIFTI 76
NGG VA+ G + IA+D R + K+F+ H Y + L ++
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDILTVYQR 66
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDP 135
+ +Y N+ M+ A M+S +Y KRF PY+ +IAGLDP+ +Y+P
Sbjct: 67 LLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPK------TYEP 119
>gi|121706806|ref|XP_001271634.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
gi|119399782|gb|EAW10208.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT 77
SP+ NGG VA+ G D IA D RL + K+F+ Y P+ FL + +
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFN---YGPS-TFLGLTGLA 58
Query: 78 I----------LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EG 126
MY + ++ +LA ++S +Y +RF P++ S +IAG++ G
Sbjct: 59 TDVNTVSDLFRFKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTG 118
Query: 127 KGCVYSYDPIGHTERA 142
K + +D IG + A
Sbjct: 119 KPFICGFDSIGCIDFA 134
>gi|431890707|gb|ELK01586.1| Proteasome subunit beta type-3 [Pteropus alecto]
Length = 234
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 36 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 95
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K + S D
Sbjct: 96 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 155
Query: 136 IG 137
IG
Sbjct: 156 IG 157
>gi|14594927|emb|CAC43324.1| putative beta 3 proteasome subunit [Nicotiana tabacum]
Length = 178
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + ++F D + + + L
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFRIHDKVFIGLSGLGTDVL 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL + K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSS 150
+ D IG E A +F G++
Sbjct: 122 TMDSIGAKELAKDFVVAGTA 141
>gi|328785087|ref|XP_624958.3| PREDICTED: proteasome subunit beta type-3-like [Apis mellifera]
Length = 205
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R T + K+F+ H Y + L T T+
Sbjct: 7 NGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYL--SLPGLATDTQTVM 64
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E N+ + + A M+S ++Y +RF PY+ IIAGL+P + + +
Sbjct: 65 EKLRFRLNLYELKENRKIHPKAFASMVSNLLYERRFGPYFVEPIIAGLNPNTYEPFICNM 124
Query: 134 DPIGHTERAN-FRAGGSSGALLQALLDN 160
D IG +N F GG+ L + ++
Sbjct: 125 DLIGCISPSNDFVVGGTCTEQLYGMCES 152
>gi|426348535|ref|XP_004041889.1| PREDICTED: proteasome subunit beta type-3 [Gorilla gorilla gorilla]
Length = 205
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPHTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|118575464|ref|YP_875207.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|302595701|sp|A0RU86.1|PSB1_CENSY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|118193985|gb|ABK76903.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 193
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQM 83
G T V + I+AS+ R++ G + ++ K F Y ++ + IL Q+
Sbjct: 3 GATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQI 62
Query: 84 YLHEHNKVMST------TSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ M S+AKM+S MMY +RFFP T I+ G+ G+ +Y+ D +G
Sbjct: 63 SALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGV--VGEPAIYTLDSLG 120
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
+ A G+ + +LD Q + + GIR+ L
Sbjct: 121 SVLPDEYAAVGTGAEMALGVLDPQFKSGMSEKDAVDLAVRGIRSAAL 167
>gi|315426612|dbj|BAJ48240.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 34 DYAIIASDTRLSAGYNIYTREQSKLFDHYYYRP------TYNFLMIFTITILPFQMYLHE 87
D ++A+DTR+++G+ + R K+F + + + + Y
Sbjct: 23 DAVVVATDTRVTSGFFVAHRRGKKVFPLAPHVAITIAGRVADAQTLIDLIKANINYYQIM 82
Query: 88 HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAG 147
+VMS ++A++ S +M+ R+FP+Y I+AG+D EG +Y+ DP G A
Sbjct: 83 RGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIAT 141
Query: 148 GSSGALLQALLD 159
GS + +L+
Sbjct: 142 GSGSPVAYGVLE 153
>gi|308493735|ref|XP_003109057.1| CRE-PBS-3 protein [Caenorhabditis remanei]
gi|308247614|gb|EFO91566.1| CRE-PBS-3 protein [Caenorhabditis remanei]
Length = 204
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-- 74
S S GGT VA+AG + IASD R+ +Q K+ H Y L F
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKV--HKVTDKVYVGLAGFQS 58
Query: 75 ----TITILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
+ + F+ L+E N+ + L++MIS + Y RF Y+T ++AGLD K
Sbjct: 59 DARTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDSNKP 118
Query: 129 CVYSYDPIGHTER-ANFRAGGSSGALLQALLDN 160
+ D IG +F A G+ L + +N
Sbjct: 119 YICCMDTIGCVSAPRDFVAVGTGQEYLLGVCEN 151
>gi|8394082|ref|NP_058981.1| proteasome subunit beta type-3 [Rattus norvegicus]
gi|730380|sp|P40112.1|PSB3_RAT RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|458731|dbj|BAA04824.1| proteasome subunit RC10-II [Rattus sp.]
gi|54261675|gb|AAH84723.1| Proteasome (prosome, macropain) subunit, beta type 3 [Rattus
norvegicus]
gi|149054057|gb|EDM05874.1| rCG33987, isoform CRA_a [Rattus norvegicus]
Length = 205
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|195421053|ref|XP_002060833.1| GK20618 [Drosophila willistoni]
gi|194156918|gb|EDW71819.1| GK20618 [Drosophila willistoni]
Length = 173
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 41/163 (25%)
Query: 96 SLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQ 155
SLA M++ K Y+ S+++AG+D G G VY P G+ R + G+ G ++
Sbjct: 51 SLASMLT---RTKFTLQYFVSSVVAGIDSNGLGAVYFNHPSGNYLRLPYHISGTGGRIIL 107
Query: 156 ALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFRNQENVDKTPVP 215
LD G + QM NA+++ LT+
Sbjct: 108 PTLDWFEG---NEEDQM------------------NAITTSLTV---------------- 130
Query: 216 LEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPL 258
+KA+ + +AF A +RDI+ G+ + + IT++G++ PL
Sbjct: 131 -DKAVEISMEAFRTARDRDIFIGNCMFINIITREGVQFKQLPL 172
>gi|62858119|ref|NP_001016503.1| proteasome beta 3 subunit [Xenopus (Silurana) tropicalis]
gi|163916422|gb|AAI57195.1| proteasome (prosome, macropain) subunit, beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 205
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G D IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAIMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T++ L F++ L+E + + + M++ ++Y +RF PYY +IAGLDP+ K
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIGH-TERANFRAGGSSGALLQALLDN 160
+ S D IG E +F G+ + + ++
Sbjct: 121 ICSLDLIGCPMETEDFVVSGTCSEQMYGMCES 152
>gi|21465651|pdb|1IRU|J Chain J, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465665|pdb|1IRU|X Chain X, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|565647|dbj|BAA05645.1| proteasome subunit HsC10-II [Homo sapiens]
gi|1091575|prf||2021261C proteasome:SUBUNIT=HsC10-II
Length = 205
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|391339684|ref|XP_003744177.1| PREDICTED: proteasome subunit beta type-3-like [Metaseiulus
occidentalis]
Length = 205
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 16/140 (11%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF-----LMIFTIT 77
NGG +A+ G IA+D RL + R S F+ + F L TIT
Sbjct: 7 NGGIVIAMKGDGCVAIATDRRL----GVEGRTVSIDFERVFEMGPRLFVGLPGLATDTIT 62
Query: 78 I---LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
+ L F M L+E N+ M+ + A ++S +Y KRF PY+ ++AG+DP+ + V
Sbjct: 63 VSQKLRFDMNLYELQENRQMTPKTFATLLSGTLYEKRFGPYFIEPVVAGMDPKTNEPYVA 122
Query: 132 SYDPIGH-TERANFRAGGSS 150
D IG TE +F G++
Sbjct: 123 CMDLIGSTTETVDFVVSGTA 142
>gi|429216737|ref|YP_007174727.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429133266|gb|AFZ70278.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 207
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 25 GTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHY------YYRPTYNFLMIFT 75
GT + + D ++A+D R+S G I +R K++ D Y + I
Sbjct: 8 GTALGIKAKDGVVLATDKRMSYGSFIMSRNAKKVYLLNDRVGIALTGLYADVSGLVRIMN 67
Query: 76 ITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDP 135
I Y + MS +++K+ S ++Y + P+ +II GLD +GK +Y+ D
Sbjct: 68 AEI---SYYETTNETTMSLYAISKLFSNILYSYKMLPFLIESIIGGLDRDGKPKIYTLDA 124
Query: 136 IGHTERANFRAGGSSGALLQALLDNQVGIIQHS 168
+G + A GS G +G++++S
Sbjct: 125 LGSVTEDKYMAVGSGGT-------TALGVLEYS 150
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 93/247 (37%), Gaps = 56/247 (22%)
Query: 16 HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL-- 71
H+ Y G TT+ + D ++A+D R + G I +E KL+ D Y +
Sbjct: 6 HYKEYM-KGTTTIGMVCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGD 64
Query: 72 --MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
+ + ++Y M S A ++S +++G R FP+ T II G D
Sbjct: 65 AQSLVRMISAETKIYKMRTGNNMPPHSCATLLSNILHGNRHFPFLTQLIIGGYDNLHGPK 124
Query: 130 VYSYDPIGH-TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
++S DP+G E +F + GS +L+ +
Sbjct: 125 LFSLDPVGGLNEETSFTSTGSGSPTALGVLEAEY-------------------------- 158
Query: 189 EINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
K + + K + A +A ERD Y+G+G+ L I +
Sbjct: 159 ----------------------KKDMTINKGKELAVKALISAMERDAYSGNGISLAVIDE 196
Query: 249 DGIKEYN 255
+G+K Y+
Sbjct: 197 NGVKIYS 203
>gi|54696308|gb|AAV38526.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|60812279|gb|AAX36205.1| proteasome subunit beta type 3 [synthetic construct]
Length = 206
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
Length = 210
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV V D ++AS+ R + G+ I ++ K++ D T + + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ Q+Y N+ M+ +A ++S + R++P +I G+D G +YS DP+G
Sbjct: 69 SVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGVDKNGP-AIYSLDPMG 127
Query: 138 HT-ERANFRAGGSSGALLQALLDNQ 161
+ E A GS + +L++Q
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQ 152
>gi|398394287|ref|XP_003850602.1| proteasome core particle subunit beta 3 [Zymoseptoria tritici
IPO323]
gi|339470481|gb|EGP85578.1| hypothetical protein MYCGRDRAFT_105064 [Zymoseptoria tritici
IPO323]
Length = 206
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 98/252 (38%), Gaps = 56/252 (22%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH---YYYRPTYNFLMIF 74
SP++ NGG VA+ G D IA D RL + K+F + Y T +
Sbjct: 3 SPFAINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGSSVYLGLTGLATDVS 62
Query: 75 TITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCV 130
+++ L MY + +S + + ++S +Y +RF P++ S ++AG+D GK +
Sbjct: 63 SVSELFRYKVNMYRLREERDISPKTFSNLVSSSLYERRFGPWFVSPVVAGIDGTSGKPFI 122
Query: 131 YSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
+D IG + A +F G+ +S Q+ G+ DL
Sbjct: 123 CGFDSIGCIDFAKDFIVSGT------------------ASDQLFGTCEGLWEPDLG---- 160
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
P L + IS A A +RD +G G H+ I KD
Sbjct: 161 -----------------------PEDLFETIS---QALLNAVDRDALSGWGAHVYIIEKD 194
Query: 250 GIKEYNFPLRKD 261
+ + R+D
Sbjct: 195 KVTKRLLKGRQD 206
>gi|352682834|ref|YP_004893358.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275633|emb|CCC82280.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 204
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTIT 77
G T V + D ++A++ R++ G+ + K+F D + + I
Sbjct: 8 GATAVGIRAKDGVVLAAEKRITYGFYSLSSSGKKVFIVNDRMAIASAGVIADMQTLAKIL 67
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ +MY + + S ++AK++SI+M+ +R+ P+ ++ G D EG V+ DP+G
Sbjct: 68 RVNAKMYELDAKRKPSVAAMAKLLSIIMFNRRWMPFIAEVLVGGYDEEGP-HVFVLDPVG 126
Query: 138 HTERANFRAGGSSGALLQALLDN 160
++ A G+ + +LD+
Sbjct: 127 SLIEDDYAALGTGAKMAIGILDS 149
>gi|410980899|ref|XP_003996811.1| PREDICTED: proteasome subunit beta type-3 [Felis catus]
Length = 205
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|440904222|gb|ELR54761.1| Proteasome subunit beta type-3, partial [Bos grunniens mutus]
Length = 205
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIF 74
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 2 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 61
Query: 75 TITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCV 130
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K +
Sbjct: 62 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 121
Query: 131 YSYDPIG 137
S D IG
Sbjct: 122 CSLDLIG 128
>gi|149054060|gb|EDM05877.1| rCG33987, isoform CRA_d [Rattus norvegicus]
Length = 202
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 4 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K + S D
Sbjct: 64 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 123
Query: 136 IG 137
IG
Sbjct: 124 IG 125
>gi|268530996|ref|XP_002630624.1| C. briggsae CBR-PBS-3 protein [Caenorhabditis briggsae]
Length = 204
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-- 74
S S GGT VA+AG + IASD R+ +Q K+ H Y L F
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKV--HKVTDKVYVGLAGFQS 58
Query: 75 ----TITILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
+ + F+ L+E N+ + L++MIS + Y RF Y+T ++AGLD K
Sbjct: 59 DARTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKP 118
Query: 129 CVYSYDPIGHTER-ANFRAGGSSGALLQALLDN 160
+ D IG +F A G+ L + +N
Sbjct: 119 YICCMDTIGCVSAPRDFVAVGTGQEYLLGVCEN 151
>gi|6755202|ref|NP_036101.1| proteasome subunit beta type-3 [Mus musculus]
gi|9910831|sp|Q9R1P1.1|PSB3_MOUSE RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|378792311|pdb|3UNB|I Chain I, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792325|pdb|3UNB|W Chain W, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792339|pdb|3UNB|KK Chain k, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792353|pdb|3UNB|YY Chain y, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792367|pdb|3UNE|I Chain I, Mouse Constitutive 20s Proteasome
gi|378792381|pdb|3UNE|W Chain W, Mouse Constitutive 20s Proteasome
gi|378792395|pdb|3UNE|KK Chain k, Mouse Constitutive 20s Proteasome
gi|378792409|pdb|3UNE|YY Chain y, Mouse Constitutive 20s Proteasome
gi|378792423|pdb|3UNF|I Chain I, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792437|pdb|3UNF|W Chain W, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792451|pdb|3UNH|I Chain I, Mouse 20s Immunoproteasome
gi|378792465|pdb|3UNH|W Chain W, Mouse 20s Immunoproteasome
gi|5757661|gb|AAD50537.1|AF060092_1 proteasome subunit C10-II [Mus musculus]
gi|12832232|dbj|BAB22017.1| unnamed protein product [Mus musculus]
gi|12845973|dbj|BAB26979.1| unnamed protein product [Mus musculus]
gi|15928628|gb|AAH14783.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|68085773|gb|AAH98233.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|74139857|dbj|BAE31772.1| unnamed protein product [Mus musculus]
gi|148684145|gb|EDL16092.1| mCG13231, isoform CRA_b [Mus musculus]
gi|444713978|gb|ELW54866.1| Proteasome subunit beta type-3 [Tupaia chinensis]
Length = 205
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|356461018|ref|NP_001239086.1| proteasome subunit beta type-3 [Canis lupus familiaris]
gi|354474809|ref|XP_003499622.1| PREDICTED: proteasome subunit beta type-3-like [Cricetulus griseus]
Length = 205
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|383873358|ref|NP_001244746.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|332258335|ref|XP_003278254.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Nomascus
leucogenys]
gi|402899980|ref|XP_003912961.1| PREDICTED: proteasome subunit beta type-3 [Papio anubis]
gi|403279415|ref|XP_003931246.1| PREDICTED: proteasome subunit beta type-3 [Saimiri boliviensis
boliviensis]
gi|355754088|gb|EHH58053.1| Proteasome subunit beta type-3 [Macaca fascicularis]
gi|380788351|gb|AFE66051.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|383414525|gb|AFH30476.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|384948330|gb|AFI37770.1| proteasome subunit beta type-3 [Macaca mulatta]
Length = 205
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|355568453|gb|EHH24734.1| Proteasome subunit beta type-3, partial [Macaca mulatta]
Length = 204
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIF 74
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 60
Query: 75 TITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCV 130
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K +
Sbjct: 61 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 120
Query: 131 YSYDPIG 137
S D IG
Sbjct: 121 CSLDLIG 127
>gi|449295365|gb|EMC91387.1| hypothetical protein BAUCODRAFT_39558 [Baudoinia compniacensis UAMH
10762]
Length = 206
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM----- 72
SP+S NGG VA+ G + IA D RL + K+F Y PT +
Sbjct: 3 SPFSINGGACVAMRGKNCVAIACDLRLGLQSLTVSNNFPKIFQ---YSPTAFLGLTGLAT 59
Query: 73 -IFTITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GK 127
+ T++ L MY + ++ + A+++S +Y +RF P++ S ++AG+D + G
Sbjct: 60 DVSTVSELFRYKVNMYRLREERDIAPKTFAQLVSSSLYERRFGPWFVSPVVAGIDGKSGA 119
Query: 128 GCVYSYDPIGHTE-RANFRAGGSS 150
+ +D IG + A+F G++
Sbjct: 120 PFICGFDSIGCIDYAADFIVSGTA 143
>gi|308321183|gb|ADO27744.1| proteasome subunit beta type-3 [Ictalurus furcatus]
Length = 205
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G D IASD R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T++ L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+ +
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDQIG 128
>gi|299116535|emb|CBN74723.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 220
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 3 LVTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHY 62
LV L + +P NGG+ +A+AG +A D R + + E ++
Sbjct: 2 LVATVALRGGVLASSNPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVL-KV 60
Query: 63 YYRPTYNFLMIFTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYY 114
+ F ++T + Q L E ++ ++ +LA ++S ++Y +R P++
Sbjct: 61 NGQLLCGFTGLWTDVLTVMQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWF 120
Query: 115 TSTIIAGLDPEGKGCVYSYDPIGH-TERANFRAGGSS 150
I+AGLDP G+ + D +G E +F G+S
Sbjct: 121 VEPIVAGLDPRGRPYLCGQDILGAPVEVDDFVVAGTS 157
>gi|77736139|ref|NP_001029768.1| proteasome subunit beta type-3 [Bos taurus]
gi|426237857|ref|XP_004012874.1| PREDICTED: proteasome subunit beta type-3 [Ovis aries]
gi|108935878|sp|P33672.3|PSB3_BOVIN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|74354224|gb|AAI02555.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|154426162|gb|AAI51436.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|296476492|tpg|DAA18607.1| TPA: proteasome subunit beta type-3 [Bos taurus]
Length = 205
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|22538465|ref|NP_002786.2| proteasome subunit beta type-3 [Homo sapiens]
gi|397477037|ref|XP_003809892.1| PREDICTED: proteasome subunit beta type-3 [Pan paniscus]
gi|20532411|sp|P49720.2|PSB3_HUMAN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|15278174|gb|AAH13008.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|119580935|gb|EAW60531.1| proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|261860656|dbj|BAI46850.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|410256642|gb|JAA16288.1| proteasome (prosome, macropain) subunit, beta type, 3 [Pan
troglodytes]
Length = 205
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|50419453|ref|XP_458253.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
gi|49653919|emb|CAG86329.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
Length = 206
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRL---SAGYNIYTREQSKLFDHYYYRPTYNFLMIFT 75
P S NGG+ VA+ G D IA D RL S G + + +L D + T + T
Sbjct: 4 PSSINGGSAVAMVGKDCIAIACDLRLGNQSLGLSNNFEKIFQLGDKTFLGLTGLATDVIT 63
Query: 76 IT-ILPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
++ F+ +Y + + T+LA ++S +Y KRF PY+ I+AGLD + K +
Sbjct: 64 LSETFRFKNNLYKLREEREIEPTTLANLVSSTLYEKRFGPYFVGPIVAGLDSKTNKPFIC 123
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 124 GFDLIGCIDFAKDFIVSGTASDQLYGMCES 153
>gi|291405921|ref|XP_002719377.1| PREDICTED: proteasome beta 3 subunit [Oryctolagus cuniculus]
Length = 205
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTYKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|237830643|ref|XP_002364619.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
gi|211962283|gb|EEA97478.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
gi|221487700|gb|EEE25932.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221507494|gb|EEE33098.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 205
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT----- 77
NG VA+AG D IASDTRL G N + + F + + F+ + +
Sbjct: 5 NGSAVVAMAGKDCVGIASDTRL--GVNQFGTVSAD-FQKVFKMNNHTFVGLAGLATDVQT 61
Query: 78 -----ILPFQMY-LHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCV 130
+ +Y L E M ++ ++S M+YG+RF PY+ S ++AGL PE + +
Sbjct: 62 VHKELVFRSNLYQLREEVTEMPPEIMSNVVSSMLYGRRFAPYFVSPVVAGLHPETHQPFL 121
Query: 131 YSYDPIGHTERA-NFRAGGSSGALLQALLDN 160
++D IG A +F G+S L + ++
Sbjct: 122 SAFDYIGAACYAKDFVCNGTSAEQLVGVCES 152
>gi|17535357|ref|NP_494913.1| Protein PBS-3 [Caenorhabditis elegans]
gi|17380195|sp|Q23237.1|PSB3_CAEEL RecName: Full=Proteasome subunit beta type-3; Short=Proteasome
subunit beta 3
gi|351050990|emb|CCD73694.1| Protein PBS-3 [Caenorhabditis elegans]
Length = 204
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-- 74
S S GGT VA+AG + IASD R+ +Q K+ H Y L F
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKV--HKVTDKVYVGLAGFQS 58
Query: 75 ----TITILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
+ + F+ L+E N+ + L++MIS + Y RF Y+T ++AGLD K
Sbjct: 59 DARTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKP 118
Query: 129 CVYSYDPIGHTER-ANFRAGGSSGALLQALLDN 160
+ D IG +F A G+ L + +N
Sbjct: 119 YICCMDTIGCVSAPRDFVAVGTGQEYLLGVCEN 151
>gi|341897730|gb|EGT53665.1| hypothetical protein CAEBREN_01834 [Caenorhabditis brenneri]
Length = 204
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-- 74
S S GGT VA+AG + IASD R+ +Q K+ H Y L F
Sbjct: 1 MSIMSYTGGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKV--HKVTDKVYVGLAGFQS 58
Query: 75 ----TITILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
+ + F+ L+E N+ + L++MIS + Y RF Y+T ++AGLD K
Sbjct: 59 DARTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKP 118
Query: 129 CVYSYDPIGHTER-ANFRAGGSSGALLQALLDN 160
+ D IG +F A G+ L + +N
Sbjct: 119 YICCMDTIGCVSAPRDFVAVGTGQEYLLGVCEN 151
>gi|296805183|ref|XP_002843416.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
gi|238844718|gb|EEQ34380.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
Length = 223
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM-----IFTIT 77
+GG VA+ G D IA D RL + E K+F+ Y TY L + T++
Sbjct: 25 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFN--YAPSTYLGLTGLATDVNTVS 82
Query: 78 IL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSY 133
L +Y + +S +LA ++S +Y KRF P++ S ++AG++ GK V +
Sbjct: 83 QLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFVCGF 142
Query: 134 DPIGHTERA-NFRAGGSS 150
D IG + A NF G++
Sbjct: 143 DSIGCIDFAKNFIVSGTA 160
>gi|224084924|ref|XP_002307450.1| predicted protein [Populus trichocarpa]
gi|222856899|gb|EEE94446.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 98/253 (38%), Gaps = 59/253 (23%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYT-----REQSKLFDHYYYRPT---YN 69
S + NG VA+ G + IASD RL G N+ T + K+ D + + +
Sbjct: 2 SIFEYNGSAIVAMVGKNCFAIASDRRL--GVNLQTVATDFQRIYKIHDKVFVGLSGLGTD 59
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL + K
Sbjct: 60 AQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLGDDDKPF 119
Query: 130 VYSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTR 188
+ + D IG E A +F GS+ +S+ G
Sbjct: 120 ICTMDFIGAKELAKDFVVAGSAS---------------------ESLYGAC--------- 149
Query: 189 EINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK 248
E + K + E+ VV A A+ +RD +G G H+ +T
Sbjct: 150 ------------------EALFKPDMEPEELFEVVSQALLASVDRDCLSGWGGHIYIVTP 191
Query: 249 DGIKEYNFPLRKD 261
D I+E R D
Sbjct: 192 DEIREKILKGRMD 204
>gi|354548652|emb|CCE45389.1| hypothetical protein CPAR2_704030 [Candida parapsilosis]
Length = 206
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI 78
P+S NGG VA+ G D IASD RL + + K+F+ + TY L +
Sbjct: 4 PFSINGGAAVAMIGKDCVAIASDLRLGSQSLGVSNNFEKIFE--FGDKTYMALTGLATDV 61
Query: 79 LPF--------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGC 129
+ +Y + + ++LA ++S +Y +RF P++ I+AGL + K
Sbjct: 62 ITLHELFKFKTNLYKLREERSIEPSTLANLVSSSLYERRFGPWFVGPIVAGLSSKDNKPF 121
Query: 130 VYSYDPIG 137
+ +D IG
Sbjct: 122 ICGFDSIG 129
>gi|344299526|gb|EGW29879.1| hypothetical protein SPAPADRAFT_63501 [Spathaspora passalidarum
NRRL Y-27907]
Length = 206
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLM 72
P+S NGG+ VA+ G D IASD RL + K+F D + T + L
Sbjct: 4 PFSINGGSAVAMVGKDCIAIASDLRLGNQSLGVSNNFEKIFGFGDKCFLGLTGLATDVLT 63
Query: 73 IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVY 131
+ +Y + + +LA ++S +Y +RF PY+ S I+AGL + K +
Sbjct: 64 LKETFRFKTNLYKLREERSIEPETLANLVSSTLYERRFGPYFVSPIVAGLGHKDNKPFIC 123
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 124 GFDSIGCIDFAKDFIVSGTASDQLYGMCES 153
>gi|159476310|ref|XP_001696254.1| hypothetical protein CHLREDRAFT_187099 [Chlamydomonas reinhardtii]
gi|158282479|gb|EDP08231.1| predicted protein [Chlamydomonas reinhardtii]
Length = 204
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD-HYYYRPTYNFLMIFT 75
S +S NG VA+AG + I SD R T + K++ H + L
Sbjct: 1 MSIFSYNGAAIVAMAGKECVAIGSDLRFGVQLQTMTCDTPKVYKIHDKLYLGLSGLQTDA 60
Query: 76 ITI---LPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
T+ L F+ +Y + M ++ M+S +Y +RF PY+ + ++AGL+P+G +
Sbjct: 61 TTLHQKLQFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPDGTPYL 120
Query: 131 YSYDPIGHTERA-NFRAGGSSGALLQALLDN 160
D IG E A +F G+S L + ++
Sbjct: 121 CGMDTIGAIESAKDFMITGTSPESLYGMCES 151
>gi|315045460|ref|XP_003172105.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
gi|311342491|gb|EFR01694.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
Length = 212
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM-----IFTIT 77
+GG VA+ G D IA D RL + E K+F+ Y TY L + T++
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFN--YAPSTYLGLTGLATDVNTVS 71
Query: 78 IL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSY 133
L +Y + +S +LA ++S +Y KRF P++ S ++AG++ GK + +
Sbjct: 72 QLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGF 131
Query: 134 DPIGHTERA-NFRAGGSS 150
D IG + A NF G++
Sbjct: 132 DSIGCIDFAKNFIVSGTA 149
>gi|145514243|ref|XP_001443032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410393|emb|CAK75635.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM---------- 72
NGG+ V + G + +A D R + T K+F + N L+
Sbjct: 8 NGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVF-----KIQDNILLALSGLNSDIH 62
Query: 73 -IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+ + +Y + N+ M T+ A +++ +Y +RF P++ + I+AGL+ GK +
Sbjct: 63 TFYALMEKEINLYNLKENRKMKPTTFANLVASALYERRFGPFFVTPIVAGLE-NGKPILA 121
Query: 132 SYDPIG-HTERANFRAGGSSG 151
+YD IG ++ +F+ GG+ G
Sbjct: 122 TYDSIGCKSDLDDFQVGGTGG 142
>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 219
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 56/241 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK--LFDHYYYRPTYNFLMIFTI--TI 78
+G TTV + D+ I+A+D R +AG+ I +R K + +Y + I +
Sbjct: 24 SGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDV 83
Query: 79 LPFQMYLHEH-NKVM-STTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
L ++ L+E NKV S +A ++S +++ +FFPY I+ G D + + +Y+ D
Sbjct: 84 LREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYDTQPR--LYTLDLF 141
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G + A GS + +L+
Sbjct: 142 GSITEDKYTATGSGSPIAYGVLEE------------------------------------ 165
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
R +E++ +E+AI V A +A RD +GDG + I G +E
Sbjct: 166 -------RYREDLS-----VEEAIKVATTAIRSAVLRDAASGDGADVVVIGPQGYEEKFI 213
Query: 257 P 257
P
Sbjct: 214 P 214
>gi|374327726|ref|YP_005085926.1| proteasome beta subunit [Pyrobaculum sp. 1860]
gi|356642995|gb|AET33674.1| proteasome beta subunit [Pyrobaculum sp. 1860]
Length = 201
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTITIL 79
TTV + D I+A+D R++AGY I + K++ DH + + + + L
Sbjct: 3 TTVGIVVRDGVILATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLTL 62
Query: 80 PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHT 139
+ Y EH K + ++L +S++++ R + Y +II G+D EG +Y D +G
Sbjct: 63 RAREYRMEHKKPIPISALVNYMSLILFYSRPYVYIVHSIIGGVD-EGGAALYMIDWLGTV 121
Query: 140 ERANFRAGGSSGALLQALLD 159
R + A GS + L+
Sbjct: 122 TRERYIATGSGSPYAKGALE 141
>gi|318102146|ref|NP_001188163.1| proteasome subunit beta type-3 [Ictalurus punctatus]
gi|308323613|gb|ADO28942.1| proteasome subunit beta type-3 [Ictalurus punctatus]
Length = 205
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G D IASD R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T++ L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPK 115
>gi|348667371|gb|EGZ07196.1| hypothetical protein PHYSODRAFT_288866 [Phytophthora sojae]
Length = 204
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NG +A+AG D IA DTRL + K+F D + +
Sbjct: 1 MSILSYNGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDV 60
Query: 74 FTIT-ILPFQMYLHEHN--KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
+++ +L F++ +++ N + + +L+ ++S MMY KRF P++ +IAGL + K +
Sbjct: 61 QSVSQLLKFKLNMYKMNEEREIKPKTLSALLSSMMYEKRFGPWFVEPVIAGLTEDNKPFL 120
Query: 131 YSYDPIG 137
S D +G
Sbjct: 121 SSMDCLG 127
>gi|452837699|gb|EME39641.1| hypothetical protein DOTSEDRAFT_75329 [Dothistroma septosporum
NZE10]
Length = 206
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 99/252 (39%), Gaps = 56/252 (22%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH---YYYRPTYNFLMIF 74
SP+S NGG VA+ G D IA D RL + K+F++ Y T +
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKVFNYGPSLYLGLTGLATDVS 62
Query: 75 TITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCV 130
+++ L MY + ++ + A ++S +Y +RF P++ S ++AG++ GK +
Sbjct: 63 SVSELFRYKVNMYRLREERDIAPQTFANLVSSSLYERRFGPWFISPVVAGINHTTGKPFI 122
Query: 131 YSYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTRE 189
+D IG + A +F G+ +S Q+ G+ DL
Sbjct: 123 CGFDSIGCIDFAKDFIVSGT------------------ASDQLFGTCEGLWEPDLG---- 160
Query: 190 INALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
P L + IS A A +RD +G G H+ I KD
Sbjct: 161 -----------------------PEDLFETIS---QALLNAVDRDALSGWGAHVYIIEKD 194
Query: 250 GIKEYNFPLRKD 261
+ + R+D
Sbjct: 195 KVTKRLLKGRQD 206
>gi|71029220|ref|XP_764253.1| proteasome subunit beta type 3 [Theileria parva strain Muguga]
gi|68351207|gb|EAN31970.1| proteasome subunit beta type 3, putative [Theileria parva]
Length = 206
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTR----EQSKLFDHYYYRPTYNFLMIFTIT- 77
NGG VA+ G IA D RL + + K+ + ++ + + T+
Sbjct: 8 NGGAVVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQTLKE 67
Query: 78 --ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDP 135
+ MY +K MS +L+ M+ M+Y +RF P++ ++IAGLD + + +D
Sbjct: 68 EIMFKVNMYKLRGDKEMSVKTLSNMVGAMLYSRRFGPWFVDSVIAGLDNDSSPYITCFDL 127
Query: 136 IG 137
+G
Sbjct: 128 VG 129
>gi|355714019|gb|AES04862.1| proteasome subunit beta type 3 [Mustela putorius furo]
Length = 180
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 5 SYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVA 64
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K + S
Sbjct: 65 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSL 124
Query: 134 DPIG 137
D IG
Sbjct: 125 DLIG 128
>gi|18411547|ref|NP_565156.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|79321410|ref|NP_001031294.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|17380184|sp|O81153.1|PSB3B_ARATH RecName: Full=Proteasome subunit beta type-3-B; AltName: Full=20S
proteasome beta subunit C-2
gi|14326552|gb|AAK60320.1|AF385730_1 At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|3421109|gb|AAC32069.1| 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|19548049|gb|AAL87388.1| At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|332197856|gb|AEE35977.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|332197857|gb|AEE35978.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
Length = 204
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL I T Q SK+ DH + + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF P+ +IAGL + K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDSIGAKELAKDFVVSGTASESL 145
>gi|346978239|gb|EGY21691.1| proteasome component PUP3 [Verticillium dahliae VdLs.17]
Length = 222
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPF- 81
+GG VA+ G D IA D RL + K+F + L T+
Sbjct: 36 DGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDVFLGLTGLATDVTTVGDLF 95
Query: 82 ----QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPI 136
MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ GK + +D I
Sbjct: 96 RYKSNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSI 155
Query: 137 GHTERA-NFRAGGSSGALLQALLDN 160
G + A +F G++ L + ++
Sbjct: 156 GCIDFAKDFIVSGTASEQLFGMCES 180
>gi|302501602|ref|XP_003012793.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
gi|291176353|gb|EFE32153.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
Length = 212
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM-----IFTIT 77
+GG VA+ G D IA D RL + E K+F+ Y TY L + T++
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFN--YAPSTYLGLTGLATDVNTVS 71
Query: 78 IL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSY 133
L +Y + +S +LA ++S +Y KRF P++ S ++AG++ GK + +
Sbjct: 72 QLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGF 131
Query: 134 DPIGHTERA-NFRAGGSS 150
D IG + A NF G++
Sbjct: 132 DSIGCIDFAKNFIVSGTA 149
>gi|302662910|ref|XP_003023105.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
gi|291187083|gb|EFE42487.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
Length = 212
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM-----IFTIT 77
+GG VA+ G D IA D RL + E K+F+ Y TY L + T++
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFN--YAPSTYLGLTGLATDVNTVS 71
Query: 78 IL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSY 133
L +Y + +S +LA ++S +Y KRF P++ S ++AG++ GK + +
Sbjct: 72 QLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGF 131
Query: 134 DPIGHTERA-NFRAGGSS 150
D IG + A NF G++
Sbjct: 132 DSIGCIDFAKNFIVSGTA 149
>gi|340724396|ref|XP_003400568.1| PREDICTED: proteasome subunit beta type-3-like [Bombus terrestris]
Length = 205
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R T + K+F+ H Y + L T T+
Sbjct: 7 NGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYL--SLPGLATDTQTVM 64
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E N+ + + A M+S ++Y +RF PY+ +IAGL P + + +
Sbjct: 65 EKLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVEPVIAGLSPVTYEPFICNV 124
Query: 134 DPIGHTERAN-FRAGGSSGALLQALLDN 160
D IG +N F GG+ L + ++
Sbjct: 125 DLIGCISPSNDFVVGGTCSEQLYGMCES 152
>gi|222136592|ref|NP_001138374.1| proteasome subunit beta type-3 [Sus scrofa]
Length = 205
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y +RF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|301762874|ref|XP_002916854.1| PREDICTED: proteasome subunit beta type-3-like [Ailuropoda
melanoleuca]
Length = 202
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 4 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F++ L+E + + +L M++ ++Y +RF PYYT +IAGLDP+ K + S D
Sbjct: 64 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSLDL 123
Query: 136 IG 137
IG
Sbjct: 124 IG 125
>gi|297839603|ref|XP_002887683.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
gi|297333524|gb|EFH63942.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
Length = 204
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL I T Q SK+ DH + + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF P+ +IAGL + K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDSIGAKELAKDFVVSGTASESL 145
>gi|56541012|gb|AAH87457.1| Unknown (protein for MGC:99279) [Xenopus laevis]
Length = 205
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NGG +A+ G D IA+D R + T + K+F D Y + T++
Sbjct: 7 NGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F++ L+E + + + M++ ++Y +RF PYY +IAGLDP+ + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPFICSLDL 126
Query: 136 IGH-TERANFRAGGSSGALLQALLDN 160
IG E +F G+ + + ++
Sbjct: 127 IGCPMETEDFVVSGTCSEQMYGMCES 152
>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390939081|ref|YP_006402819.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
fermentans DSM 16532]
gi|302595704|sp|B8D673.1|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390192188|gb|AFL67244.1| proteasome endopeptidase complex, beta subunit [Desulfurococcus
fermentans DSM 16532]
Length = 202
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 89/234 (38%), Gaps = 59/234 (25%)
Query: 25 GTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKL--------FDHYYYRPTYNFLMIFTI 76
GT + + + ++AS+ RL+ + +R K+ NFL+ +
Sbjct: 8 GTAIGLKTSEGVVLASEKRLTYDGFVLSRNARKIHMITNHIGVGFAGLMGDVNFLV--KV 65
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
L + Y +H + + T SLAK++S+++Y + P T ++ G D EG +Y DP+
Sbjct: 66 LRLEAKNYELQHGREIKTRSLAKLLSVILYSYKLAPMLTEVVVGGYDEEGP-SLYILDPV 124
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G + A GS L + + +
Sbjct: 125 GSVIEEKYVAVGSGAQL-----------------------------------ALGYIEPR 149
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
LG + E E A++ VK ERD+ +GDG+ L I K+G
Sbjct: 150 YNPGLGLKEAE---------ELAVNAVKTVI----ERDVLSGDGIDLVVIDKNG 190
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 55/235 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV + D ++A+D R + G I +E KL+ D Y + +
Sbjct: 10 GTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVRYV 69
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
++Y K + S A +IS +++G R FP+ T II G D ++S DPIG
Sbjct: 70 SAEAKLYKMRTGKNIPPLSCATLISNILHGNRMFPFLTQLIIGGYDLLYGPRLFSLDPIG 129
Query: 138 H-TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
E ++F A GS +L+ + SK M
Sbjct: 130 GLNEESSFTATGSGSPTAYGILELEY------SKDM------------------------ 159
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
L+ +++ A +A ERD ++G+G+ L + K+G+
Sbjct: 160 ------------------TLKDGLNLAIKALISAMERDAFSGNGISLAYVNKEGV 196
>gi|427787219|gb|JAA59061.1| Putative 20s proteasome regulatory subunit beta type psmb3/pup3
[Rhipicephalus pulchellus]
Length = 205
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH----YYYRPTYNFLM 72
S S NGG VA+ G + IA+D RL A + + ++F+ Y P
Sbjct: 1 MSIMSYNGGVVVAMKGKECVAIAADRRLGARGHTIALDFERIFEMGPKLYCGLPGLATDT 60
Query: 73 IFTITILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
L F++ L+E ++++ +L +IS ++Y +RF PY+ I+AGLDP
Sbjct: 61 QTVAQRLKFRINLYELREGRLITPKTLGSVISNLLYERRFGPYFVQPIVAGLDP 114
>gi|351721818|ref|NP_001237990.1| uncharacterized protein LOC100499664 [Glycine max]
gi|255625639|gb|ACU13164.1| unknown [Glycine max]
Length = 204
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL I T Q SK+ D + + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D +G E A +F G++ L
Sbjct: 122 TMDCLGAKELAKDFVVSGTASESL 145
>gi|195132590|ref|XP_002010726.1| GI21700 [Drosophila mojavensis]
gi|193907514|gb|EDW06381.1| GI21700 [Drosophila mojavensis]
Length = 101
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 36/137 (26%)
Query: 125 EGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDL 184
E KG VY YDPIG ER +R G+S ALL LD G + + ++ DL
Sbjct: 1 EVKGAVYYYDPIGSYERVRYRVVGTSYALLLPCLDVFYGW------ENNRLTPPLKDEDL 54
Query: 185 ALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLC 244
+T A+ + + A++RDIY+GD L
Sbjct: 55 TMT------------------------------MAVRMARKCLYIASDRDIYSGDMGELL 84
Query: 245 AITKDGIKEYNFPLRKD 261
++T +G+K LR D
Sbjct: 85 SVTSEGMKSSTIKLRAD 101
>gi|297701417|ref|XP_002827712.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Pongo abelii]
Length = 218
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L +++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSLVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 91/239 (38%), Gaps = 66/239 (27%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT------- 75
G TT+ + ++A++ R + G I +R+ K+ YR T N M
Sbjct: 8 KGTTTIGIICDQGVVLATERRATMGNFIASRDAQKI-----YRITDNAAMTIAGSVGDGQ 62
Query: 76 --ITILPFQMYLHEHNK--VMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
IL + L E + MS +L+ ++S ++ R+ PYY +I GLD G +Y
Sbjct: 63 RLARILQVEAKLFELRRHGSMSINALSMLLSNILAEMRYAPYYVQVLIGGLDKAGPK-IY 121
Query: 132 SYDPI-GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
S DP+ G E F + GS + +L+++
Sbjct: 122 SLDPLGGRIEEEKFVSTGSGSPIAYGVLEDRY---------------------------- 153
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
K + +E+ + + A +A +RD +G+G+ C IT +
Sbjct: 154 --------------------KPGMSVEEGVELAARALESAMKRDSASGNGMQFCVITAE 192
>gi|91084563|ref|XP_973600.1| PREDICTED: similar to proteasome beta 3 subunit [Tribolium
castaneum]
Length = 210
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYY-RPTYNFLMIFTITI 78
NGG VA+ G IASD R K+F+ H Y P +
Sbjct: 12 NGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYVGLPGLATDTQTVMEK 71
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F+ L+E N+ MS + M+S M+Y RF P++ I+AGLDP + + + D
Sbjct: 72 LRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFVEPIVAGLDPGTYEPYICNMDL 131
Query: 136 IGHTERAN-FRAGGSSGALLQALLDN 160
IG + N F GG++ + L + ++
Sbjct: 132 IGCPNQPNDFVVGGTASSQLFGMCES 157
>gi|388521659|gb|AFK48891.1| unknown [Lotus japonicus]
Length = 204
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + +ASD RL I T Q SK+ D + + +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAVASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSSILYEKRFGPYFCQPVIAGLGDEDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F GS+ L
Sbjct: 122 TMDCIGAKELAKDFVVAGSASESL 145
>gi|367001775|ref|XP_003685622.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
gi|357523921|emb|CCE63188.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
Length = 205
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTYNFLMIFTI 76
P S NGG VA+AG D IA D RL + + K+F+ H ++ T + T+
Sbjct: 4 PSSINGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFNYGHVFFGITGLATDVTTL 63
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
+ +Y + + + + +++S +Y KRF PY+ ++AG++ + GK +
Sbjct: 64 NEVFRYKTNLYKLKEERPIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIAG 123
Query: 133 YDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 124 FDLIGCIDEAKDFIVSGTASDQLFGMCES 152
>gi|270008657|gb|EFA05105.1| hypothetical protein TcasGA2_TC015205 [Tribolium castaneum]
Length = 205
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYY-RPTYNFLMIFTITI 78
NGG VA+ G IASD R K+F+ H Y P +
Sbjct: 7 NGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYVGLPGLATDTQTVMEK 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F+ L+E N+ MS + M+S M+Y RF P++ I+AGLDP + + + D
Sbjct: 67 LRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFVEPIVAGLDPGTYEPYICNMDL 126
Query: 136 IGHTERAN-FRAGGSSGALLQALLDN 160
IG + N F GG++ + L + ++
Sbjct: 127 IGCPNQPNDFVVGGTASSQLFGMCES 152
>gi|448414651|ref|ZP_21577664.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
gi|445681760|gb|ELZ34188.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
Length = 243
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 63/238 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI----- 78
G TTV + D ++A+D R S GY + +++ K+ + + PT + +++
Sbjct: 49 GTTTVGLKTEDGVVLATDMRASLGYMVSSKDVQKVEEIH---PTGALTIAGSVSAAQSLI 105
Query: 79 ----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
++Y + MS T+L+ ++ + F Y I+ G+D +G +YS D
Sbjct: 106 RSIRAEVRLYESRRGENMSMTALSTLLGNFLRSGAF--YVVQPILGGVDEDGP-HIYSID 162
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G L E
Sbjct: 163 PAGSI----------------------------------------------LEEEYTVTG 176
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
S LG QE D + +++A +V A +A ERD+ +G+G+++C +T+DG++
Sbjct: 177 SGSQYALGVLEQEYNDA--LSIDEAKTVAARAVKSAVERDLASGNGINICVVTEDGVE 232
>gi|281344355|gb|EFB19939.1| hypothetical protein PANDA_004975 [Ailuropoda melanoleuca]
Length = 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 5 SYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVA 64
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E + + +L M++ ++Y +RF PYYT +IAGLDP+ K + S
Sbjct: 65 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSL 124
Query: 134 DPIG 137
D IG
Sbjct: 125 DLIG 128
>gi|255731824|ref|XP_002550836.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
gi|240131845|gb|EER31404.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
Length = 206
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI 78
P+S NGG VA+ G + IASD RL + K+F+ TY L +
Sbjct: 4 PFSINGGAAVAMIGKECIAIASDLRLGQQSLGVSNNFEKIFE--ISPKTYLGLTGLASDV 61
Query: 79 LPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGC 129
L + +Y + + ++LA +IS +Y +RF P++ S I+AGLD + K
Sbjct: 62 LTLKELFRFKTNLYKLREDHSIEPSTLANLISSSLYERRFGPWFVSPIVAGLDSKTNKPF 121
Query: 130 VYSYDPIG 137
+ +D IG
Sbjct: 122 ICGFDSIG 129
>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
gi|302595790|sp|A6USJ3.1|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 219
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 90/239 (37%), Gaps = 55/239 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV + D ++A+D R + G I +E KL+ D Y + + +
Sbjct: 14 GTTTVGLICEDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLL 73
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
++Y M+ S + S +++G R +P T II G D ++S DP+G
Sbjct: 74 SAEAKIYKMRTGNNMTPLSCTTLTSNVLHGNRHYPLLTQLIIGGYDLINGPKLFSLDPVG 133
Query: 138 H-TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
E ++F A GS +L+ +
Sbjct: 134 GINEESSFTATGSGSPTAYGVLEAEY---------------------------------- 159
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
K+ + +EK + + A +A +RD Y+G+G+ L I K G+ Y+
Sbjct: 160 --------------KSEINIEKGLLIAVKALISAMQRDAYSGNGISLAKIDKTGVTLYS 204
>gi|449464176|ref|XP_004149805.1| PREDICTED: proteasome subunit beta type-3-A-like [Cucumis sativus]
Length = 204
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + K++ D + + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLSDEDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDSIGAKELAKDFVVSGTASESL 145
>gi|213409155|ref|XP_002175348.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
gi|212003395|gb|EEB09055.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
Length = 204
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI---- 78
NGG+ +A+ G + IASD RL A T K+F TY L +
Sbjct: 7 NGGSCIAMVGKECVAIASDLRLGAQSVSLTNNFPKIFSMT--EKTYLGLTGLATDVQTLH 64
Query: 79 ----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
MY + + + A ++S +Y KRF PY+T I+AGL + + +D
Sbjct: 65 ELFRYKINMYKLREERQIEPKTFANLVSSTLYEKRFAPYFTFPIVAGLSKTNEPFICGFD 124
Query: 135 PIGHTERA-NFRAGGSSGALLQALLDN 160
IG + A +F G++ L + ++
Sbjct: 125 SIGCIDFAKDFAVSGTASDHLYGICED 151
>gi|327275596|ref|XP_003222559.1| PREDICTED: proteasome subunit beta type-3-like [Anolis
carolinensis]
Length = 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 18/120 (15%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTI 76
S S NGG +A+ G + IA+D R + T + K+F P + L I
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIF------PMGDRLFIGLA 54
Query: 77 TI----------LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
+ L F++ L+E + + +L M+S ++Y +RF PYYT +IAGLDP
Sbjct: 55 GLATDVQTVAQRLKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLDP 114
>gi|410917408|ref|XP_003972178.1| PREDICTED: proteasome subunit beta type-3-like [Takifugu rubripes]
Length = 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T++ L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+ +
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 130 VYSYDPIGH-TERANFRAGGSSGALLQALLDNQVG 163
+ S D IG E +F G+ + + ++ G
Sbjct: 121 ICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWG 155
>gi|301110580|ref|XP_002904370.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
gi|262096496|gb|EEY54548.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
Length = 204
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NG +A+AG D IA DTRL + K+F D + +
Sbjct: 1 MSILSYNGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDV 60
Query: 74 FTIT-ILPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
+++ +L F+ MY + + +L+ ++S MMY KRF P++ +IAGL + K +
Sbjct: 61 QSVSQLLKFKINMYKMNEERDIKPKTLSALLSNMMYEKRFGPWFVEPVIAGLTEDNKPFL 120
Query: 131 YSYDPIG 137
S D +G
Sbjct: 121 SSMDCLG 127
>gi|357475641|ref|XP_003608106.1| Proteasome subunit beta type [Medicago truncatula]
gi|355509161|gb|AES90303.1| Proteasome subunit beta type [Medicago truncatula]
gi|388497742|gb|AFK36937.1| unknown [Medicago truncatula]
Length = 204
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 20 YSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFLMI 73
+ NG VA+ G + IASD RL I T Q SK+ D Y + + +
Sbjct: 4 FKHNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLYIGLSGLATDSQTL 63
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+ + ++Y M + A ++S M Y KRF PY+ +IAGL + K + +
Sbjct: 64 YQRLVFRHKLYQLREELDMKPETFASLVSAMQYEKRFGPYFCQPVIAGLGDDDKPFICTM 123
Query: 134 DPIGHTERA-NFRAGGSSGALL 154
D IG E A +F G++ L
Sbjct: 124 DAIGAKELAKDFVVAGTASESL 145
>gi|443717932|gb|ELU08769.1| hypothetical protein CAPTEDRAFT_228896 [Capitella teleta]
Length = 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH----YYYRPTYNFLMIFTITI 78
NG VA+AG D IA+D R + K++++ Y P +
Sbjct: 7 NGSAIVAMAGKDCVAIAADRRFGIQGQTVALDFQKIYEYGPNLYMGLPGLATDVQTVAQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDP 135
L F++ ++E N+ M ++ ++S ++Y +RF PY+ +IAGLDP+ K + S D
Sbjct: 67 LKFRVNMYELRENRKMKPQTMLSVVSNLLYERRFGPYFVEPVIAGLDPKTSKPFIASLDL 126
Query: 136 IG 137
IG
Sbjct: 127 IG 128
>gi|307175918|gb|EFN65731.1| Proteasome subunit beta type-3 [Camponotus floridanus]
Length = 286
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R + K+F+ H + + L T T+
Sbjct: 88 NGGAVIAMKGKNCVAIAADRRFGIQAQTIMCDFQKIFEMEPHLFI--SLPGLATDTQTVM 145
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E N+ + + M+S ++Y KRF PY+ IIAGLDP + + +
Sbjct: 146 ERLRFRLNLYELKENRKIHPKTFTAMVSNLLYEKRFGPYFVEPIIAGLDPVTFEPFICNM 205
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLDN 160
D IG A +F GG+ L + ++
Sbjct: 206 DLIGSRNMAEDFVVGGTCTEQLYGMCES 233
>gi|401626020|gb|EJS43988.1| pup3p [Saccharomyces arboricola H-6]
Length = 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLMIFTI 76
P S NGG VA+AG D IA D RL + + + K+F H ++ T + T+
Sbjct: 4 PSSINGGVVVAMAGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFFGVTGLASDVTTL 63
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
+ +Y ++ + + +++S +Y +RF PY+ ++AG++ + GK +
Sbjct: 64 NEMFRYKTNLYKLREDRAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAG 123
Query: 133 YDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 124 FDLIGCIDEAKDFIVSGTASDQLFGMCES 152
>gi|403214964|emb|CCK69464.1| hypothetical protein KNAG_0C03600 [Kazachstania naganishii CBS
8797]
Length = 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPT---YNFLMI 73
P S NGG VA+AG D IA D RL + + K+F H + T + L +
Sbjct: 4 PSSINGGICVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFHYGHVFMGMTGLATDVLTL 63
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
+ +Y ++++ + +++S +Y +RF PY+ ++AG++ + GK +
Sbjct: 64 SDVFRYKTNLYKLREDRMIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKTGKPFIAG 123
Query: 133 YDPIGHTERA 142
+D IG + A
Sbjct: 124 FDLIGCIDEA 133
>gi|315426554|dbj|BAJ48184.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485300|dbj|BAJ50954.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 34 DYAIIASDTRLSAGYNIYTREQSKLFDHYYYRP------TYNFLMIFTITILPFQMYLHE 87
D ++A+DTR+++G+ + R K+ + + + + Y
Sbjct: 23 DAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQIM 82
Query: 88 HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAG 147
+VMS ++A++ S +M+ R+FP+Y I+AG+D EG +Y+ DP G A
Sbjct: 83 RGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIAT 141
Query: 148 GSSGALLQALLD 159
GS + +L+
Sbjct: 142 GSGSPVAYGVLE 153
>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 223
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 34 DYAIIASDTRLSAGYNIYTREQSKLFDHYYYRP------TYNFLMIFTITILPFQMYLHE 87
D ++A+DTR+++G+ + R K+ + + + + Y
Sbjct: 26 DAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQIM 85
Query: 88 HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANFRAG 147
+VMS ++A++ S +M+ R+FP+Y I+AG+D EG +Y+ DP G A
Sbjct: 86 RGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIAT 144
Query: 148 GSSGALLQALLD 159
GS + +L+
Sbjct: 145 GSGSPVAYGVLE 156
>gi|407465690|ref|YP_006776572.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407048878|gb|AFS83630.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 210
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 88/235 (37%), Gaps = 55/235 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKL--FDHYYYRPTYNFLMIFT--ITIL 79
G TTV + D ++ +D R SAGY I K+ D + + + IL
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQQIDQHAGLTLAGGVADAQNIVDIL 71
Query: 80 PFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ LH E +S SLA++ S++ + R +P+ ++ G D G +++ D G
Sbjct: 72 RYHSNLHRVEKQNSISIHSLARLCSLIFHQNRGYPFMADILLGGYDANGP-SLFNVDMFG 130
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
E ++ GS + LL+ +
Sbjct: 131 SVEEKSYVTTGSGSPVAYGLLEEEY----------------------------------- 155
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
K + +E+A V A AA R+I TGDG+++ + KDG +
Sbjct: 156 -------------KEDLTIEEAKQVALRAVKAAIVRNIGTGDGINIAIMDKDGFR 197
>gi|241957591|ref|XP_002421515.1| macropain subunit, putative; multicatalytic endopeptidase complex
subunit, putative; proteasome component, putative
[Candida dubliniensis CD36]
gi|223644859|emb|CAX40854.1| macropain subunit, putative [Candida dubliniensis CD36]
Length = 206
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFT 75
P+S NGG VA+ G D IASD RL + K+F D + T + T
Sbjct: 4 PFSINGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVIT 63
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVY 131
+ L +Y + + ++LA ++S +Y +RF P++ S I+AGL + K +
Sbjct: 64 LKELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFIC 123
Query: 132 SYDPIG 137
+D IG
Sbjct: 124 GFDSIG 129
>gi|125778116|ref|XP_001359838.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|195157484|ref|XP_002019626.1| GL12496 [Drosophila persimilis]
gi|54639588|gb|EAL28990.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|194116217|gb|EDW38260.1| GL12496 [Drosophila persimilis]
Length = 205
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF--LMIFTITI-- 78
NGG VA+ G D IA+D R + + K+F H R L +T+
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVF-HIAPRMFLGLTGLQTDILTVRD 65
Query: 79 -LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYD 134
L F+ L+E N+ M+ + M+S +Y RF PY+ ++AGLDP+ K V + D
Sbjct: 66 RLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTLKPFVCNMD 125
Query: 135 PIGH-TERANFRAGGSSGALLQALLD 159
IG E +F G+ L + +
Sbjct: 126 LIGCPNEPDDFVVAGTCAEQLYGMCE 151
>gi|255558626|ref|XP_002520338.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223540557|gb|EEF42124.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 204
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQS--KLFDHYYYRPT---YNFL 71
S + NG +A+ G + IASD RL I T Q K+ D + + +
Sbjct: 2 SIFEYNGSALIAMVGKNCFAIASDRRLGVQLQTIATDFQRIYKIHDRLFLGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M+ + A ++S ++Y KRF PY+ +IAGL E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMNPETFASLVSALLYEKRFGPYFCQPVIAGLSDENKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSS 150
+ D IG E A +F G++
Sbjct: 122 TMDSIGAKELARDFVVAGTA 141
>gi|157112534|ref|XP_001651824.1| proteasome subunit beta type [Aedes aegypti]
gi|108878045|gb|EAT42270.1| AAEL006174-PA [Aedes aegypti]
Length = 205
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTI-TI 78
NGG VA+ G + IA+D R + K+F+ H Y I T+
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDILTVHQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F+ L+E N+ M+ A M+S +Y KRF PY+ +IAGL+P+ + + + D
Sbjct: 67 LLFRKNLYEVRENREMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLNPKTFEPFICNMDL 126
Query: 136 IGHTERAN-FRAGGSSGALLQALLD 159
IG N F G+ L + +
Sbjct: 127 IGCPNMPNDFVVAGTCAEQLYGMCE 151
>gi|94468582|gb|ABF18140.1| 20S proteasome regulatory subunit beta type PSMB3/PUP3 [Aedes
aegypti]
Length = 205
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTI-TI 78
NGG VA+ G + IA+D R + K+F+ H Y I T+
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDILTVHQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F+ L+E N+ M+ A M+S +Y KRF PY+ +IAGL+P+ + + + D
Sbjct: 67 LLFRKNLYEVRENREMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLNPKTFEPFICNMDL 126
Query: 136 IGHTERAN-FRAGGSSGALLQALLD 159
IG N F G+ L + +
Sbjct: 127 IGCPNMPNDFVVAGTCAEQLYGMCE 151
>gi|350397681|ref|XP_003484954.1| PREDICTED: proteasome subunit beta type-3-like [Bombus impatiens]
Length = 205
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R T + K+F+ H Y + L T T+
Sbjct: 7 NGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYL--SLPGLATDTQTVM 64
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E N+ + + A M+S ++Y +RF PY+ +IAGL P + V +
Sbjct: 65 EKLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVEPVIAGLSPVTYEPFVCNV 124
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLDN 160
D IG + +F GG+ L + ++
Sbjct: 125 DLIGCISPSDDFVVGGTCSEQLYGMCES 152
>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384433733|ref|YP_005643091.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|74557429|sp|Q980L4.1|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595697|sp|D0KRX1.1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 196
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 95/236 (40%), Gaps = 54/236 (22%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYY----RPTYNFLMIFT-ITILP 80
T V + D ++AS+ RLS G + +++ K++ + Y L T I +
Sbjct: 7 TAVGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKINKFLMAGAGIYGDLQTLTRIMNVE 66
Query: 81 FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTE 140
+ Y K +S + AK++S+++Y + P+ + + G+D +G +Y DPIG
Sbjct: 67 IKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGP-QLYVLDPIGSLI 125
Query: 141 RANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTIL 200
N+ A GS + +L+++ +D ++
Sbjct: 126 EDNYAAVGSGARIAIGVLESE--------------------YDPNMS------------- 152
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
L+ A ++ A A+ ERDI +GDG+ L I K G E F
Sbjct: 153 ---------------LDVATQLITKAIKASIERDITSGDGIDLAIIDKKGNYENKF 193
>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595814|sp|B1L6X8.1|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 198
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 50/178 (28%)
Query: 83 MYLHEHNKVMSTTSLAKMISIMMYGKRFFP-YYTSTIIAGLDPEGKGCVYSYDPIGHTER 141
MY E+ K + T++AK++SI++Y RF YY ++ G+D G ++ DP G
Sbjct: 68 MYELENEKAATPTNVAKLLSILLYQGRFSGIYYAELVVGGIDNSGP-KIFVLDPAGGLME 126
Query: 142 ANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILL 201
NF A GS + GI++ K+
Sbjct: 127 ENFSAVGSGAQI-------ATGILERFFKE------------------------------ 149
Query: 202 GFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLR 259
G +E V+ + +AIS RD +GDG+ L IT G + P+R
Sbjct: 150 GMSEKEAVELAERAMREAIS-----------RDALSGDGIDLLIITSKGSRMEFIPVR 196
>gi|145514570|ref|XP_001443190.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410568|emb|CAK75793.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM---------- 72
NGG+ V + G + +A D R + T K+F + N L+
Sbjct: 8 NGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVF-----KIQDNILLALSGLNSDIH 62
Query: 73 -IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+ + +Y + N+ M ++ A +++ +Y +RF P++ + I+AGL+ GK +
Sbjct: 63 TFYALMEKEINLYNLKENRKMKPSTFANLVASSLYERRFGPFFVTPIVAGLE-NGKPILA 121
Query: 132 SYDPIG-HTERANFRAGGSSG 151
+YD IG ++ +F+ GG+ G
Sbjct: 122 TYDSIGCKSDLDDFQVGGTGG 142
>gi|393794893|ref|ZP_10378257.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 210
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 90/235 (38%), Gaps = 55/235 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGY---NIYTREQSKLFDHYYYRPTYNFLMIFTIT-IL 79
G TTV + D ++ +D R SAGY N T + K+ +H I IL
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDEHAGLTLAGGVADAQNIVDIL 71
Query: 80 PFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ LH E +S SLA++ S++ + R +P+ ++ G D G +++ D G
Sbjct: 72 RYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDANGP-ALFNIDMFG 130
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
E+ ++ GS + LL+ +
Sbjct: 131 SVEKKSYVTTGSGSPVAYGLLEEEY----------------------------------- 155
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+ + +E+A + A AA R+I TGDG+++ + KDG +
Sbjct: 156 -------------RPDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVMDKDGFR 197
>gi|146305014|ref|YP_001192330.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595851|sp|A4YJ04.1|PSB2_METS5 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145703264|gb|ABP96406.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 196
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 60/233 (25%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--------DHYYYRPTYNFLMIFTIT 77
T V + D I+ + RLS G + ++ K+F + I
Sbjct: 7 TAVGIRLQDGVILGAVRRLSYGGYVLSKSAKKVFPISRFGIGGAGLFGDLQALTRIMNAN 66
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
I +++Y +N+ +ST + AK++SI++Y ++ P+ + + G+D G+ +Y DP+G
Sbjct: 67 IKYYELY---NNRPISTRAAAKLLSIILYQYKYMPFISEVLFGGVD-NGEPQLYVLDPLG 122
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+LLD+ + ++ VL + L LT+ +L
Sbjct: 123 ------------------SLLDDIYAAVGSGARVAIGVLEAEYSEKLTLTQ-----GREL 159
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
TI + A+AERD+ +GDG+ + I+KDG
Sbjct: 160 TI-------------------------KSLRASAERDVTSGDGIDILTISKDG 187
>gi|348562309|ref|XP_003466953.1| PREDICTED: proteasome subunit beta type-3-like [Cavia porcellus]
Length = 202
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 4 NGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F++ L+E + + +L M++ ++Y +RF PYYT +IAGLDP+
Sbjct: 64 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPK 112
>gi|156088863|ref|XP_001611838.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154799092|gb|EDO08270.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 205
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSA-GYNIYTREQSKLF---DHYYYRPTYNFLMIFTI-T 77
NGG VA+ G IA D RL G + + K F D Y+ I T+ +
Sbjct: 8 NGGAVVAMVGNGCVAIACDKRLGMNGQHTISSNFPKAFKVTDTAYFAACGLATDIQTMKS 67
Query: 78 ILPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDP 135
+ F+ MY K M +LA M+ ++Y +RF P++ S+++AGLD + +Y +D
Sbjct: 68 EIEFKTNMYALRCEKNMGVKTLAHMVGSLLYSRRFGPWFVSSVVAGLDKDTPH-IYCFDL 126
Query: 136 IG 137
IG
Sbjct: 127 IG 128
>gi|332017819|gb|EGI58480.1| Proteasome subunit beta type-3 [Acromyrmex echinatior]
Length = 238
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R T + K+++ H Y + L T T+
Sbjct: 40 NGGAVIAMKGKNCVAIAADRRFGIQAQTITCDFQKIYEMGPHLYV--SLPGLATDTQTVM 97
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E N+ + + MIS ++Y +RF PY+ I+AGLDP + + +
Sbjct: 98 ERLRFRLNLYELKENRKIHPKTFTAMISNLLYERRFGPYFVEPIVAGLDPVTFEPFICNM 157
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLDN 160
D IG A +F GG+ L + ++
Sbjct: 158 DLIGSRNIAEDFVVGGTCTEQLYGMCES 185
>gi|66358224|ref|XP_626290.1| possible proteasome component [Cryptosporidium parvum Iowa II]
gi|46228012|gb|EAK88932.1| possible proteasome component [Cryptosporidium parvum Iowa II]
Length = 204
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 17/127 (13%)
Query: 23 NGGTTVAVAGPDYAIIASDTRL-SAGYNIYTREQSKLFDHYYYRPTYNFLMIFT------ 75
NGG +A+ G + A+D RL S GY + + K+ RP+ LM F+
Sbjct: 6 NGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVI-----RPSSKTLMGFSGLATDI 60
Query: 76 ---ITILPFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
++ F+ L+ + + +L+ M + ++Y KRF PY+ I+AGLD +
Sbjct: 61 HTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFI 120
Query: 131 YSYDPIG 137
YD IG
Sbjct: 121 AGYDLIG 127
>gi|196476700|gb|ACG76215.1| proteasome beta 3 subunit [Amblyomma americanum]
Length = 182
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH----YYYRPTYNFLMIFTITI 78
NGG +A+ G D IA+D RL A + + ++F+ Y P
Sbjct: 7 NGGVVLAMKGKDCVAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLPGLATDTQTVAQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
L F++ L+E + ++ +L +IS ++Y +RF PY+ ++AGLDP
Sbjct: 67 LKFRINLYELREGRKITPKTLGSVISNLLYERRFGPYFVQPVVAGLDP 114
>gi|365981473|ref|XP_003667570.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
gi|343766336|emb|CCD22327.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
Length = 205
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI 78
P S NGG VA+AG D IA D RL + + K+F HY + + +T
Sbjct: 4 PSSINGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIF-HYGHVFLGITGLATDVTT 62
Query: 79 LP------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
L +Y + ++ + + +++S +Y KRF PY+ ++AG++ + GK +
Sbjct: 63 LSETFRYKSNLYELKEDRAIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIA 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES 152
>gi|357509159|ref|XP_003624868.1| Proteasome subunit beta type [Medicago truncatula]
gi|355499883|gb|AES81086.1| Proteasome subunit beta type [Medicago truncatula]
Length = 204
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL I T Q SK+ D + + +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDSQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S M Y KRF PY+ +IAGL + K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDAIGAKELAKDFVVAGTASESL 145
>gi|255712483|ref|XP_002552524.1| KLTH0C06886p [Lachancea thermotolerans]
gi|238933903|emb|CAR22086.1| KLTH0C06886p [Lachancea thermotolerans CBS 6340]
Length = 205
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI 78
P S NGG VA+ G D IA D RL + K+F HY + + +T
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVANNFEKIF-HYGHVFLGLTGLATDVTT 62
Query: 79 LP------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
L MY + ++ + + +++S +Y KRF PY+T ++AG++ GK +
Sbjct: 63 LSETFRYKTNMYKLKEDRFIEPETFTQLVSSTLYEKRFGPYFTGPVVAGINSRTGKPYIS 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 123 GFDLIGCIDEAKDFVVSGTASEQLFGMCES 152
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV V D ++AS+ R + G I ++ K++ D T + + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGNFIASKTAKKVYQIDDLVAMTTAGSVGDAQQLVRLV 68
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ Q+Y N+ M+ +A ++S + R++P +I G+D G G +YS D +G
Sbjct: 69 NVESQLYKMRRNESMTIKGIATLMSNFLNSNRYYPMMVQLLIGGVDKNGPG-IYSLDALG 127
Query: 138 HT-ERANFRAGGSSGALLQALLDNQ 161
+ E A GS + +L++Q
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQ 152
>gi|281209309|gb|EFA83482.1| p21-activated protein kinase [Polysphondylium pallidum PN500]
Length = 1404
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 16/126 (12%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM---------- 72
NGG + + G D IA+D R + + K+ YR + +
Sbjct: 7 NGGAVIVMTGKDCVAIATDLRFGIQHTTVSTNNPKV-----YRISDKCFIGISGLVTDAQ 61
Query: 73 -IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + +Y + + MS L ++S M+Y KRF PY+T +I GLD K +
Sbjct: 62 TLYQKLVFRHNLYKLKEERDMSPQVLTNLVSNMLYEKRFGPYFTEPVICGLDSNNKPFIS 121
Query: 132 SYDPIG 137
D IG
Sbjct: 122 GMDLIG 127
>gi|50290063|ref|XP_447463.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526773|emb|CAG60400.1| unnamed protein product [Candida glabrata]
Length = 205
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTYNFLMIFTI 76
P S NGG VA+AG D IA D RL + K+F+ H ++ T + T+
Sbjct: 4 PSSINGGIVVAMAGKDCVAIACDLRLGNQSLGVSNNFEKVFNYGHVFFGITGLATDVTTL 63
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
L +Y ++ + + +++S +Y +RF PY+ ++AG++ + GK +
Sbjct: 64 NELFRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAG 123
Query: 133 YDPIGHTERA 142
+D IG + A
Sbjct: 124 FDLIGCIDEA 133
>gi|383854573|ref|XP_003702795.1| PREDICTED: proteasome subunit beta type-3-like [Megachile
rotundata]
Length = 205
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R T + K+F+ H Y + L T T+
Sbjct: 7 NGGAIIAMRGKNCVAIAADRRFGIQAQTITCDFQKIFEMGPHLYM--SLPGLATDTQTVM 64
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E N+ + + A M+S ++Y +RF PY+ IIAGL P + + +
Sbjct: 65 ERLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVQPIIAGLSPVTFEPYICNM 124
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLDN 160
D IG + +F GG+ L + ++
Sbjct: 125 DVIGCINPSDDFVVGGTCSEQLYGMCES 152
>gi|346469345|gb|AEO34517.1| hypothetical protein [Amblyomma maculatum]
Length = 205
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH----YYYRPTYNFLMIFTITI 78
NGG +A+ G D IA+D RL A + + ++F+ Y P
Sbjct: 7 NGGVVLAMKGKDCVAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLPGLATDTQTVAQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
L F++ L+E + ++ +L +IS ++Y +RF PY+ ++AGLDP
Sbjct: 67 LKFRINLYELREGRKITPKTLGSVISNLLYERRFGPYFVQPVVAGLDP 114
>gi|84997075|ref|XP_953259.1| proteasome beta 3 subunit [Theileria annulata strain Ankara]
gi|65304255|emb|CAI76634.1| proteasome beta 3 subunit, putative [Theileria annulata]
Length = 220
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTR----EQSKLFDHYYYRPTYNFLMIFTI-- 76
NGG VA+ G IA D RL + + K+ + ++ + + T+
Sbjct: 22 NGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQTLKD 81
Query: 77 -TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDP 135
+ MY +K MS +L+ M+ M+Y +RF P++ ++IAGLD + + +D
Sbjct: 82 EIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDTDSSPYITCFDL 141
Query: 136 IG 137
+G
Sbjct: 142 VG 143
>gi|388491594|gb|AFK33863.1| unknown [Medicago truncatula]
Length = 206
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL I T Q SK+ D + + +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDSQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S M Y KRF PY+ +IAGL + K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDAIGAKELAKDFVVAGTASESL 145
>gi|341885035|gb|EGT40970.1| hypothetical protein CAEBREN_25310 [Caenorhabditis brenneri]
Length = 223
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-- 74
S S GGT VA+AG + IASD R+ +Q K+ H Y L F
Sbjct: 1 MSIMSYTGGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKV--HKVTDKVYVGLAGFQS 58
Query: 75 ----TITILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG 128
+ + F+ L+E N+ + L++MIS + Y RF Y+T ++AGLD K
Sbjct: 59 DARTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKP 118
Query: 129 CVYSYDPIGHTER-ANFRAGGSSGALLQAL--LDNQVGIIQHSSKQMKSVLGGIRTHD 183
+ D IG +F A G+ L + ++++VG + ++ VL G R D
Sbjct: 119 YICCMDTIGCVSAPRDFVAVGTGQEYLLGVCEMESKVGRVYFI---LEDVLMGERRKD 173
>gi|346469773|gb|AEO34731.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + ++F D Y + + L
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVNLQTIATDFKRIFRIHDKLYVGLSGLATDAL 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASVVSAILYEKRFGPYFCQPVIAGLGEDDVPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSS 150
+ D IG E A +F G++
Sbjct: 122 TMDCIGAKELAKDFVVSGTA 141
>gi|347522758|ref|YP_004780328.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459640|gb|AEM38076.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 211
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 58/235 (24%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT-------I 76
G TTV + D ++AS+ R+S G I ++ K+F R F ++ I
Sbjct: 9 GATTVGIRVKDGVVLASEKRVSYGGFIVSKAGKKVF-KVTDRIGIAFAGLYADMQALARI 67
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
Q Y K + AK++S ++Y + P+ T ++ G+D G +Y DP+
Sbjct: 68 LSAEIQYYEVSTGKPARVYAAAKLLSNILYASKLIPFITEVLVGGVDETGS-HLYVMDPV 126
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G ++ A GS A+ +GI++ +
Sbjct: 127 GSVIEDDYAALGSGAAI-------AIGILEAN---------------------------- 151
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK-DG 250
+R ++D+ EKA+ + A ERD +GDG+ + I + DG
Sbjct: 152 ------YRKDMSIDEAKELAEKAVRI-------AIERDAISGDGIDILVIKRVDG 193
>gi|149235806|ref|XP_001523781.1| proteasome component PUP3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452760|gb|EDK47016.1| proteasome component PUP3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 212
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 31/141 (21%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL----MIF 74
P+S NGG VA+ G D IASD RL + + + +H+ T+ FL M
Sbjct: 4 PFSINGGAAVAMIGKDCIAIASDLRLGS-------QSLGVLNHF--EKTFQFLPHTFMAL 54
Query: 75 T------ITILPF-----QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
T T+L +Y + +LA ++S ++Y +RF P++ S I+AGL+
Sbjct: 55 TGLATDVTTVLELFKFKTNLYKLREEHYIEPLTLANLVSSLLYERRFGPWFVSPIVAGLE 114
Query: 124 P-------EGKGCVYSYDPIG 137
E K + +D IG
Sbjct: 115 KVKGSKNGEVKPFICGFDSIG 135
>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
gi|121697945|sp|Q2NI68.1|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
Length = 205
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 90/237 (37%), Gaps = 58/237 (24%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD------HYYYRPTYNFLMIFTIT 77
G TTV D ++A++TR + G + + KLF + + I
Sbjct: 9 GTTTVGFVCTDGVVLATETRATMGSLVANKNADKLFQIDDKIGATIAGTVSHAQSLMDIL 68
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+Y + K MS +LA + S ++ + PYY TI+AG+D +G +Y+ DP G
Sbjct: 69 KAEISLYKLRNEKDMSIDALAVLTSNILKSR---PYYVQTILAGVDKDG-AKLYTLDPSG 124
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
F + GS +L++
Sbjct: 125 SYIPDTFTSTGSGSPYAFGVLED------------------------------------- 147
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEY 254
R E+ + E+ + A T+A ERD+Y+G+ L ITKDG+K Y
Sbjct: 148 ------RYNED-----ITTEEGKKIAIKAITSAMERDVYSGNNYRLGVITKDGMKIY 193
>gi|115469154|ref|NP_001058176.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|17380214|sp|Q9LST7.1|PSB3_ORYSJ RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|8671506|dbj|BAA96836.1| beta 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|51535468|dbj|BAD37365.1| 20S proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|113596216|dbj|BAF20090.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|218198634|gb|EEC81061.1| hypothetical protein OsI_23870 [Oryza sativa Indica Group]
gi|222635966|gb|EEE66098.1| hypothetical protein OsJ_22127 [Oryza sativa Japonica Group]
Length = 204
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + ++F D Y + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL + + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDCIGAKELAKDFVVSGTASESL 145
>gi|388513745|gb|AFK44934.1| unknown [Medicago truncatula]
Length = 204
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL I T Q SK+ D + + +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDSQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S M Y KRF PY+ +IAGL + K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMRPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDAIGAKELAKDFVVAGTASESL 145
>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595692|sp|A8AA46.1|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 198
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S G T V + D ++A++ R+S G I ++ K+F D + + I
Sbjct: 2 SGPGATAVGIKVKDGVVLAAERRMSYGGFIMSKAARKVFKVGDRMGMACAGLYADMQAIA 61
Query: 78 -ILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
L ++ +E + + M S A+++ +++Y + FP T T+ G D E + ++ D
Sbjct: 62 RALENEIRYYEISNKRKMKVRSAARLLGLILYSNKLFPLMTETVFGGYDDEPR--IFVLD 119
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQ 161
P+G + A G+ L ALLD +
Sbjct: 120 PVGSVIEEKYSAVGTGAPLAMALLDKE 146
>gi|194744578|ref|XP_001954770.1| GF18436 [Drosophila ananassae]
gi|190627807|gb|EDV43331.1| GF18436 [Drosophila ananassae]
Length = 205
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF--LMIFTITI-- 78
NGG VA+ G D IA+D R + + K+F H R L +T+
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVF-HIAPRMFLGLTGLQTDILTVRD 65
Query: 79 -LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYD 134
L F+ L+E N+ M+ + M+S +Y RF PY+ ++AGLDP K + + D
Sbjct: 66 RLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPFICNMD 125
Query: 135 PIGH-TERANFRAGGSSGALLQALLD 159
IG E +F G+ L + +
Sbjct: 126 LIGCPNEPVDFVVAGTCAEQLYGMCE 151
>gi|345567463|gb|EGX50395.1| hypothetical protein AOL_s00076g159 [Arthrobotrys oligospora ATCC
24927]
Length = 205
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 94/251 (37%), Gaps = 55/251 (21%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT 77
+P++ NGG +A+AG D IA D RL + K+F++ L T
Sbjct: 3 NPFTLNGGACLAMAGKDCVAIACDLRLGQQALTLSNNFPKIFNYGDVFLGLTGLATDVQT 62
Query: 78 I-----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
+ +Y + + ++A ++S +Y +RF PY+ S ++AG++ GK +
Sbjct: 63 MHSLFRYKVNLYRLREEREIEPETMANLVSSSLYERRFGPYFVSPVVAGINQRTGKPFIC 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
+D IG + A +F G+ +S Q+ V G+ DL
Sbjct: 123 GFDSIGCIDFAKDFIVSGT------------------ASDQLFGVAEGLWEPDLE----- 159
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
P E V + +RD G G H+ ITKD
Sbjct: 160 ----------------------P---EDLFETVSQTLLNSLDRDALAGWGAHVYIITKDK 194
Query: 251 IKEYNFPLRKD 261
+ + R+D
Sbjct: 195 VTKRLLRTRQD 205
>gi|429329532|gb|AFZ81291.1| proteasome subunit beta type 3, putative [Babesia equi]
Length = 217
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 28/138 (20%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLS-----------------------AGYNIYTREQSKLF 59
NGG VA+ G IA D RL A + T Q+
Sbjct: 8 NGGAVVAMVGDQCVAIACDKRLGMNQQITIGTNFPKAFRVTDKSFFAASGLATDVQTMYV 67
Query: 60 DHYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
+H + F + MY MS L+ M+S M+Y +RF P++ ++
Sbjct: 68 NHPCTPCCRKEEIEFRV-----NMYEASSESKMSINKLSNMVSTMLYSRRFSPWFVEAVV 122
Query: 120 AGLDPEGKGCVYSYDPIG 137
AGLD + K + +D IG
Sbjct: 123 AGLDAQNKPFISCFDLIG 140
>gi|68488966|ref|XP_711676.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|77023006|ref|XP_888947.1| hypothetical protein CaO19_1336 [Candida albicans SC5314]
gi|46432996|gb|EAK92454.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|76573760|dbj|BAE44844.1| hypothetical protein [Candida albicans]
gi|238883475|gb|EEQ47113.1| proteasome component PUP3 [Candida albicans WO-1]
Length = 206
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLM 72
P+S NGG VA+ G D IASD RL + K+F D + T + +
Sbjct: 4 PFSINGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVIS 63
Query: 73 IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVY 131
+ + +Y + + ++LA ++S +Y +RF P++ S I+AGL + K +
Sbjct: 64 LKELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFIC 123
Query: 132 SYDPIG 137
+D IG
Sbjct: 124 GFDSIG 129
>gi|328715258|ref|XP_001950836.2| PREDICTED: proteasome subunit beta type-3-like [Acyrthosiphon
pisum]
Length = 205
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTI--- 76
NGG + + G D IA+D R + + +K+F H Y IFT+
Sbjct: 7 NGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTYMGFPGLATDIFTVYEK 66
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP---EGKGCVYSY 133
+ ++Y + N+ +S +LA ++S ++Y RF P++ +I LD E C
Sbjct: 67 IMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPYMC--DM 124
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLD 159
D IG ++ NF GG+S + L L +
Sbjct: 125 DLIGCVNKSDNFVVGGTSSSQLYGLCE 151
>gi|332375660|gb|AEE62971.1| unknown [Dendroctonus ponderosae]
Length = 205
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYY-RPTYNFLMIFTITI 78
NGG +A+ G + IA+D R K+F+ H Y P +
Sbjct: 7 NGGAMLAMKGENCVAIAADRRFGVQAQTLATNFEKIFEMGSHLYVGLPGLATDTQTVMEK 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F+ ++E N+ MS + M+S ++Y RF PY+ ++AGL+P+ + + + D
Sbjct: 67 LRFRKNIYELKENRAMSPRVFSAMVSHLLYENRFGPYFVEPVVAGLEPKTFEPFICNMDL 126
Query: 136 IGHTER-ANFRAGGSSGALLQALLD 159
IG + +F GG++ A L + +
Sbjct: 127 IGCINQPKDFVVGGTASAQLYGMCE 151
>gi|17380183|sp|O65084.1|PSB3_PICMA RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|2982322|gb|AAC32146.1| probable proteasome subunit [Picea mariana]
gi|116784298|gb|ABK23292.1| unknown [Picea sitchensis]
Length = 204
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + ++F D Y + +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDVQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ ++Y + M + A ++S ++Y KRF PY+ +IAGL + K +
Sbjct: 62 TLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDSIGAKELAKDFVVAGTAAESL 145
>gi|239788580|dbj|BAH70963.1| ACYPI007526 [Acyrthosiphon pisum]
Length = 205
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTI--- 76
NGG + + G D IA+D R + + +K+F H Y IFT+
Sbjct: 7 NGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTYMGFPGLATDIFTVYEK 66
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP---EGKGCVYSY 133
+ ++Y + N+ +S +LA ++S ++Y RF P++ +I LD E C
Sbjct: 67 IMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPYMC--DM 124
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLD 159
D IG ++ NF GG+S + L L +
Sbjct: 125 DLIGCVNKSDNFVVGGTSSSQLYGLCE 151
>gi|386875364|ref|ZP_10117538.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386806763|gb|EIJ66208.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 210
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 88/235 (37%), Gaps = 55/235 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGY---NIYTREQSKLFDHYYYRPTYNFLMIFTIT-IL 79
G TTV + D ++ +D R SAGY N T + K+ H I IL
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDLHAGLTLAGGVADAQNIVDIL 71
Query: 80 PFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ LH E +S SLA++ S++ + R +P+ ++ G D G +++ D G
Sbjct: 72 RYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGFDANGP-ALFNIDMFG 130
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
E ++ GS + LL+ +
Sbjct: 131 SVEEKSYVTTGSGSPVAYGLLEEEY----------------------------------- 155
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
K + +E+A + A AA R+I TGDG+++ + KDG +
Sbjct: 156 -------------KKDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVMDKDGFR 197
>gi|340345703|ref|ZP_08668835.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520844|gb|EGP94567.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 210
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 90/235 (38%), Gaps = 55/235 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGY---NIYTREQSKLFDHYYYRPTYNFLMIFTIT-IL 79
G TTV + D ++ +D R SAGY N T + K+ H I IL
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDAHAGLTLAGGVADAQNIVDIL 71
Query: 80 PFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ LH E +S SLA++ S++ + R +P+ ++ G D G +++ D G
Sbjct: 72 RYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDANGP-ALFNIDMFG 130
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
E+ ++ GS + LL+ +
Sbjct: 131 SVEQKSYVTTGSGSPVAYGLLEEEY----------------------------------- 155
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
++ + +E+A + A AA R+I TGDG+++ + KDG +
Sbjct: 156 -------------RSDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVMDKDGFR 197
>gi|385301682|gb|EIF45855.1| proteasome component pup3 [Dekkera bruxellensis AWRI1499]
Length = 206
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI 78
P + NGG+ VA+ G D IASD RL + + K+F +Y + L +
Sbjct: 5 PSTYNGGSAVAMVGKDCVAIASDLRLGQQSLGLSNDFEKIF---HYGHVFLGLTGLATDV 61
Query: 79 LPF--------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGC 129
+ +Y + + + S A +IS +Y +RF P++ I+AGL+ GK
Sbjct: 62 MSVHEDLRKKTNLYKMKEQREIEPXSFANLISSSLYKRRFGPWFVGPIVAGLNSHSGKPF 121
Query: 130 VYSYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+ +D IG + A +F G++ L + ++
Sbjct: 122 ICGFDYIGCIDFAKDFIVAGTASEQLFGMCES 153
>gi|351723417|ref|NP_001237278.1| uncharacterized protein LOC100306084 [Glycine max]
gi|255627485|gb|ACU14087.1| unknown [Glycine max]
Length = 204
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL I T Q SK+ D + + +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL + K +
Sbjct: 62 TLYQRLLFRHKLYQLREERDMKPQTFASLVSAILYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDAIGAKELAKDFVVAGTASESL 145
>gi|148229244|ref|NP_001088741.1| proteasome (prosome, macropain) subunit, beta type, 3 [Xenopus
laevis]
gi|56270462|gb|AAH87395.1| LOC496005 protein [Xenopus laevis]
Length = 205
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G D IA+D R + T + K+F + Y +
Sbjct: 1 MSIMSYNGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + + M++ ++Y +RF PYY +IAGLDP+ +
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPF 120
Query: 130 VYSYDPIGH-TERANFRAGGSSGALLQALLDN 160
+ S D IG E +F G+ + + ++
Sbjct: 121 ICSLDLIGCPMETEDFVVSGTCSEQMYGMCES 152
>gi|209737458|gb|ACI69598.1| Proteasome subunit beta type-3 [Salmo salar]
gi|303661230|gb|ADM16027.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T++ L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPK 115
>gi|83769195|dbj|BAE59332.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 203
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM-------IFT 75
NGG VA+ G D IA D RL + K+F+ Y P+ FL + T
Sbjct: 5 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFN---YSPS-TFLGLTGLATDVST 60
Query: 76 ITIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVY 131
++ L MY + ++ +LA ++S +Y +RF P++ S ++AG++ GK +
Sbjct: 61 VSDLFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFIC 120
Query: 132 SYDPIGHTERA 142
+D IG + A
Sbjct: 121 GFDSIGCIDFA 131
>gi|118102948|ref|XP_418119.2| PREDICTED: proteasome subunit beta type-3 [Gallus gallus]
Length = 205
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IASD R + T + K+F + Y +
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
T+ L F++ L+E + + + M+S ++Y +RF PYYT +IAGLDP
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDP 114
>gi|119872605|ref|YP_930612.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595721|sp|A1RTI7.1|PSB2_PYRIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119674013|gb|ABL88269.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum islandicum
DSM 4184]
Length = 200
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 93/233 (39%), Gaps = 54/233 (23%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTITIL 79
TTV +A + ++A+D R++AGY I ++ K++ DH + + + + L
Sbjct: 3 TTVGIAVKEGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSLLSFLTL 62
Query: 80 PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHT 139
+ Y E+ + + +L +S++++ R + Y +II G+D E +Y D +G
Sbjct: 63 RAREYKIEYKRPIPIRALVNYVSLILFYSRPYIYLVHSIIGGVDREEGAVLYMVDWLGTV 122
Query: 140 ERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTI 199
R + A GS + L+
Sbjct: 123 TRERYIATGSGSPYAKGALE---------------------------------------- 142
Query: 200 LLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+G+R + LE A+ + + AA D +G+G+ + ITK+G +
Sbjct: 143 -VGYRED-------MSLEDAVDLAIRSVKAAIRNDPGSGEGIDVVVITKEGFR 187
>gi|331245973|ref|XP_003335621.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309314611|gb|EFP91202.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 204
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 23 NGGTTVAVAGPDYAIIASDTRL-------SAGYNIYTREQSKLFDHYYYRPTYNFLM--I 73
NGG+ VA+ G IA D RL + + + K+F T F + +
Sbjct: 7 NGGSVVAMVGKGCVAIACDLRLGNQALTVACNFEKVFQVTDKMFIGLPGLATDTFTLKNV 66
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
F + MY + +V+ ++A +IS +Y KRF PY+ ++AGLD + + + +
Sbjct: 67 FRHRV---NMYKMKEERVIEPQTMAHLISSTLYQKRFGPYFVEPVVAGLDSKNEPFIAAT 123
Query: 134 DPIGHTERA-NFRAGGSSGALL 154
D IG A +F G++ + L
Sbjct: 124 DLIGCINFAKDFVVSGTASSKL 145
>gi|209733400|gb|ACI67569.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NGG +A+ G IA+D R + T + K+F D Y + T++
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPK 115
>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
gi|74551014|sp|Q8TJB5.1|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
Length = 210
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV V D ++AS+ R + G+ I ++ K++ D T + + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ Q+Y N+ M+ +A ++S + R++P +I G+D G +YS D +G
Sbjct: 69 SVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGVDKNGP-AIYSLDAMG 127
Query: 138 HT-ERANFRAGGSSGALLQALLDNQ 161
+ E A GS + +L++Q
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQ 152
>gi|297845150|ref|XP_002890456.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|5263324|gb|AAD41426.1|AC007727_15 Identical to gb|Y13173 Arabidopsis thaliana mRNA for proteasome
subunit. EST gb|T76747 comes from this gene [Arabidopsis
thaliana]
gi|12744997|gb|AAK06878.1|AF344327_1 putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|297336298|gb|EFH66715.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFLMIFTI 76
NG VA+ G + IASD RL I T Q SK+ D + + + ++
Sbjct: 7 NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQTLYQR 66
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ ++Y + M + A ++S ++Y KRF PY +IAGL + K + + D I
Sbjct: 67 LVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFICTMDSI 126
Query: 137 GHTERA-NFRAGGSSGALL 154
G E A +F G++ L
Sbjct: 127 GAKELAKDFVVSGTASESL 145
>gi|289742193|gb|ADD19844.1| 20S proteasome regulatory subunit beta type PSMB3/PUP3 [Glossina
morsitans morsitans]
Length = 205
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI---- 78
NGG VA+ G D I +D R + + + S FD + FL + +
Sbjct: 7 NGGCVVAMRGKDCVAIGTDRR----FGVQAQTISTDFDKVFQMNPRMFLGLVGLQTDILT 62
Query: 79 ----LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F+ L+E N+ M A M+S +Y RF P++ +IAGLDPE
Sbjct: 63 VKDRLHFRKSLYETRENREMQPERFAAMLSSFLYEHRFGPFFIEPVIAGLDPE 115
>gi|352683092|ref|YP_004893616.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275891|emb|CCC82538.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 199
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 55/233 (23%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRP----TYNFLMIFTITIL 79
TTV + D ++A+D R++AGY I + K++ D + + + I +
Sbjct: 3 TTVGIKARDGVVLAADKRVTAGYYIAHKRGEKIWKIDEHVAATMSGGVADLQGLLNILSI 62
Query: 80 PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHT 139
+ Y EH + + +L S++++ R F Y +II G D EG +Y D +G
Sbjct: 63 QAREYRSEHGRPIPIKTLVNYASLVLFYSRPFIYLVHSIIGGYDDEGP-QLYMLDWLGSY 121
Query: 140 ERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTI 199
+ A GS +L E+N
Sbjct: 122 SSERYIATGSGSPYAMGVL------------------------------EVN-------- 143
Query: 200 LLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+R+ ++D +AI V ++A AA D +G+G+ + ITK+G +
Sbjct: 144 ---YRDDISID-------EAIKVAENAVKAAMRNDPGSGEGIDIVVITKEGFR 186
>gi|225705338|gb|ACO08515.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T++ L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPK 115
>gi|18395025|ref|NP_564149.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
gi|288558823|sp|Q9XI05.2|PSB3A_ARATH RecName: Full=Proteasome subunit beta type-3-A; AltName: Full=20S
proteasome beta subunit C-1; AltName: Full=Proteasome
component T
gi|17473525|gb|AAL38246.1| proteasome subunit [Arabidopsis thaliana]
gi|21387087|gb|AAM47947.1| proteasome subunit [Arabidopsis thaliana]
gi|110740894|dbj|BAE98543.1| 20S proteasome beta subunit PBC2 like protein [Arabidopsis
thaliana]
gi|332192025|gb|AEE30146.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
Length = 204
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL I T Q SK+ D + + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY +IAGL + K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDSIGAKELAKDFVVSGTASESL 145
>gi|225706352|gb|ACO09022.1| Proteasome subunit beta type 3 [Osmerus mordax]
Length = 205
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NGG +A+ G +A+D R + T + K+F D Y + T++
Sbjct: 7 NGGAVMAMRGKQCVAVAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F++ L+E + + + M+S ++Y KRF PYY +IAGLDP+
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYEKRFGPYYIEPVIAGLDPK 115
>gi|185133100|ref|NP_001117722.1| proteasome subunit beta type-3 [Oncorhynchus mykiss]
gi|6093786|sp|O73817.1|PSB3_ONCMY RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|3063687|gb|AAC14141.1| proteasome subunit C10-11 [Oncorhynchus mykiss]
gi|225705904|gb|ACO08798.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T++ L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPK 115
>gi|325179973|emb|CCA14375.1| proteasome subunit beta type3 putative [Albugo laibachii Nc14]
Length = 204
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NG +A+AG D IA DTRL + K+F D + +
Sbjct: 1 MSILSYNGSAIIAMAGKDCVGIACDTRLGLQAQTISTNFQKVFRVSDKIFLGLAGLATDV 60
Query: 74 FTIT-ILPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
T++ +L F+ MY + + +L+ +S MMY KRF P++ +IAGL + + +
Sbjct: 61 QTVSQLLKFKVNMYKMNEERDLKPETLSSYLSAMMYKKRFGPWFIEPVIAGLTADNQPFL 120
Query: 131 YSYDPIG 137
S D +G
Sbjct: 121 SSMDCLG 127
>gi|302764110|ref|XP_002965476.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
gi|302823097|ref|XP_002993203.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300138973|gb|EFJ05723.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300166290|gb|EFJ32896.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
Length = 204
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIF 74
S ++ NG VA+ G D IASD RL + + ++F D Y +
Sbjct: 2 SIFTYNGSALVAMVGKDCFAIASDRRLGVNFQTIATDFQRIFKIHDKLYV----GLAGLA 57
Query: 75 TITILPFQMYLHEHN-------KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ +Q + HN + M + + +S +Y KRF PY+ +IAGL + K
Sbjct: 58 SDVQTLYQRLKYRHNLFQLQEERDMRPETFSNFVSATLYEKRFGPYFVQPLIAGLGADNK 117
Query: 128 GCVYSYDPIGHTERA-NFRAGGSSGALL 154
+ + D IG E + +F GG++ L
Sbjct: 118 PYICTMDSIGAIEHSKDFVVGGTASESL 145
>gi|300707553|ref|XP_002995980.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
gi|239605230|gb|EEQ82309.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
Length = 205
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 21/148 (14%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL---- 79
GG+ +A+ G I +D RL AG + +K++ T N + F T L
Sbjct: 9 GGSILAMIGKSSVSIVTDKRLGAGPISVGKNFTKVY-------TLNNRLFFGFTGLVSDA 61
Query: 80 ---------PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
+ +++ ++ + M + L+ +IS ++Y KR PYY STI+ G+ + K
Sbjct: 62 EILYKKIRKNYNLFVQDNKRDMEPSELSNLISFILYQKRLQPYYVSTIVCGITSDNKPYA 121
Query: 131 YSYDPIG-HTERANFRAGGSSGALLQAL 157
S D IG E F G++ L L
Sbjct: 122 SSMDCIGAMKETDEFATVGTASNNLMGL 149
>gi|225705836|gb|ACO08764.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGQQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T++ L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPK 115
>gi|328864212|gb|AEB53189.1| proteasome subunit beta type 3 [Holothuria glaberrima]
Length = 202
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTIT-I 78
NG VA+ G D IASD R + E K+F+ Y + + T++
Sbjct: 4 NGSAIVAMRGKDCVAIASDRRFGIQAQTVSMECQKIFEMAPRLYIGLSGLATDVQTVSNR 63
Query: 79 LPFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F++ L+ N+ + + M++ ++Y +RF PY+T +IAGLDP+
Sbjct: 64 LKFRLNLYTLRENRDIKPKTFMSMVANLLYERRFGPYFTEPVIAGLDPK 112
>gi|197632283|gb|ACH70865.1| proteasome (prosome, macropain) subunit, beta type 3 [Salmo salar]
gi|209735862|gb|ACI68800.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T++ L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPK 115
>gi|395532536|ref|XP_003768326.1| PREDICTED: proteasome subunit beta type-3 [Sarcophilus harrisii]
Length = 205
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGL P+ +
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPNTLMSMVANLLYEKRFGPYYTEPVIAGLHPKTFEPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|195038067|ref|XP_001990482.1| GH18224 [Drosophila grimshawi]
gi|193894678|gb|EDV93544.1| GH18224 [Drosophila grimshawi]
Length = 205
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRP-------TYNFLMIFT 75
NGG VA+ G D IA+D R + + K+F H R + L +
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVF-HIAPRMFLGLTGLQTDILTVRD 65
Query: 76 ITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYD 134
+ +Y + N+ M+ + M+S +Y RF PY+ ++AGLDP+ K + + D
Sbjct: 66 RLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPFICNMD 125
Query: 135 PIGH-TERANFRAGGSSGALLQALLD 159
IG E +F G+ L + +
Sbjct: 126 LIGCPNEPDDFVVAGTCAEQLYGMCE 151
>gi|269972971|emb|CBE67030.1| CG11981-PA [Drosophila atripex]
gi|269973424|emb|CBE66639.1| CG11981-PA [Drosophila ananassae]
gi|269973426|emb|CBE66640.1| CG11981-PA [Drosophila ananassae]
gi|269973428|emb|CBE66641.1| CG11981-PA [Drosophila ananassae]
gi|269973430|emb|CBE66642.1| CG11981-PA [Drosophila ananassae]
gi|269973432|emb|CBE66643.1| CG11981-PA [Drosophila ananassae]
gi|269973434|emb|CBE66644.1| CG11981-PA [Drosophila ananassae]
gi|269973436|emb|CBE66645.1| CG11981-PA [Drosophila ananassae]
gi|269973438|emb|CBE66646.1| CG11981-PA [Drosophila ananassae]
gi|269973440|emb|CBE66647.1| CG11981-PA [Drosophila ananassae]
gi|269973442|emb|CBE66648.1| CG11981-PA [Drosophila ananassae]
gi|269973444|emb|CBE66649.1| CG11981-PA [Drosophila ananassae]
gi|269973446|emb|CBE66650.1| CG11981-PA [Drosophila ananassae]
Length = 205
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNF--LMIFTITI-- 78
NGG VA+ G D IA+D R + + K+F H R L +T+
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVF-HIAPRMFLGLTGLQTDILTVRD 65
Query: 79 -LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYD 134
L F+ L+E N+ M+ + M+S +Y RF PY+ ++AGLDP K + + D
Sbjct: 66 RLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPFICNMD 125
Query: 135 PIGH-TERANFRAGGSSGALLQALLD 159
IG E +F G+ L + +
Sbjct: 126 LIGCPNEPDDFVVAGTCAEQLYGMCE 151
>gi|322800746|gb|EFZ21650.1| hypothetical protein SINV_15015 [Solenopsis invicta]
Length = 218
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R + K+++ H Y + L T T+
Sbjct: 20 NGGAVIAMKGKNCVAIAADRRFGIQAQTIMCDFQKIYEMGPHLYV--SLPGLATDTQTVM 77
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVYSY 133
L F++ L+E N+ + + MIS ++Y KRF PY+ I+AGLDP + + +
Sbjct: 78 ERLRFRLNLYELKENRKIHPKTFTAMISNLLYEKRFGPYFVEPIVAGLDPVTFEPFICNM 137
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLDN 160
D IG A +F GG+ L + ++
Sbjct: 138 DLIGSRNMAEDFVVGGTCTEQLYGMCES 165
>gi|195111548|ref|XP_002000340.1| GI10178 [Drosophila mojavensis]
gi|193916934|gb|EDW15801.1| GI10178 [Drosophila mojavensis]
Length = 205
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRP-------TYNFLMIFT 75
NGG VA+ G D IA+D R + + K+F H R + L +
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVF-HIAPRMFLGLTGLQTDILTVRD 65
Query: 76 ITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYD 134
+ +Y + N+ M+ + M+S +Y RF PY+ ++AGLDP+ K + + D
Sbjct: 66 RLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPFICNMD 125
Query: 135 PIGH-TERANFRAGGSSGALLQALLD 159
IG E +F G+ L + +
Sbjct: 126 LIGCPNEPDDFVVAGTCAEQLYGMCE 151
>gi|225459609|ref|XP_002285871.1| PREDICTED: proteasome subunit beta type-3-A isoform 1 [Vitis
vinifera]
gi|302141789|emb|CBI18992.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG +A+ G + IASD R + K++ D + + +
Sbjct: 2 SIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDSIGAKELAKDFVVAGTASESL 145
>gi|195395370|ref|XP_002056309.1| GJ10880 [Drosophila virilis]
gi|194143018|gb|EDW59421.1| GJ10880 [Drosophila virilis]
Length = 205
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRP-------TYNFLMIFT 75
NGG VA+ G D IA+D R + + K+F H R + L +
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVF-HIAPRMFLGLTGLQTDILTVRD 65
Query: 76 ITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYD 134
+ +Y + N+ M+ + M+S +Y RF PY+ ++AGLDP+ K + + D
Sbjct: 66 RLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPFICNMD 125
Query: 135 PIGH-TERANFRAGGSSGALLQALLD 159
IG E +F G+ L + +
Sbjct: 126 LIGCPNEPDDFVVAGTCAEQLYGMCE 151
>gi|67606993|ref|XP_666789.1| proteasome component [Cryptosporidium hominis TU502]
gi|54657844|gb|EAL36555.1| proteasome component [Cryptosporidium hominis]
Length = 202
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 17/127 (13%)
Query: 23 NGGTTVAVAGPDYAIIASDTRL-SAGYNIYTREQSKLFDHYYYRPTYNFLMIFT------ 75
NGG +A+ G + A+D RL S GY + K+ RP+ LM F+
Sbjct: 4 NGGAILAMKGKECVAFATDMRLGSNGYRTIGTDFDKVI-----RPSSKTLMGFSGLATDI 58
Query: 76 ---ITILPFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
++ F+ L+ + + +L+ M + ++Y KRF PY+ I+AGLD +
Sbjct: 59 HTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFI 118
Query: 131 YSYDPIG 137
YD IG
Sbjct: 119 AGYDLIG 125
>gi|374636366|ref|ZP_09707939.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
gi|373559248|gb|EHP85553.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
Length = 220
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 55/236 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV + D ++A+D R + G I +E KL+ D Y + +
Sbjct: 10 GTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVRYV 69
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
++Y K + S A ++S +++G R FP+ T II G D ++S DP+G
Sbjct: 70 SAEAKLYKMRTGKNIPPLSCATLMSNILHGSRMFPFLTQLIIGGYDFLYGPRLFSLDPVG 129
Query: 138 H-TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
E + F A GS +L+ +++S D+ L +N LS K
Sbjct: 130 GLNEESYFTATGSGSPTAYGVLE-----LEYS-------------RDMLLKDGLN-LSVK 170
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
A +A ERD ++G+G+ L + K+G+K
Sbjct: 171 -----------------------------ALMSAMERDAFSGNGISLAYVNKEGVK 197
>gi|432331212|ref|YP_007249355.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
gi|432137921|gb|AGB02848.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
Length = 213
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 94/238 (39%), Gaps = 56/238 (23%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD------HYYYRPTYNFLM 72
P S G TT+ + D I+A++ R + G I +++ K++ +
Sbjct: 6 PESMKGTTTIGIVFADGVILATEKRATMGLMIASKKAKKVYQVADRIGMTTAGGVGDAQQ 65
Query: 73 IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYS 132
+ I + +Y ++ ++ + A ++S + R+FPYY ++ G+D +G VYS
Sbjct: 66 LARILNVECNLYQIRRSRPITVGATATLLSNYLNQNRYFPYYVQLLVGGVDEKGP-SVYS 124
Query: 133 YDPI-GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
D + G T+ A GS + +L+++ + +T E+
Sbjct: 125 VDAMGGATKEEEIVATGSGSPMAYGVLEDR--------------------YKPGMTEEM- 163
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
AI + +A +RD +G+G+H+ AITKD
Sbjct: 164 ---------------------------AIEIAVRGLKSAMKRDAGSGEGIHVVAITKD 194
>gi|126458649|ref|YP_001054927.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595741|sp|A3MS44.1|PSB1_PYRCJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126248370|gb|ABO07461.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum calidifontis
JCM 11548]
Length = 201
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTITIL 79
TTV + D ++A+D R++AGY I + K++ DH + + + + L
Sbjct: 3 TTVGIVAKDGVVLATDKRVTAGYYIAHKAGEKIWKIDDHVAATMSGGVADLQSVLSFLSL 62
Query: 80 PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHT 139
+ Y EH + + +L +S++++ R + Y +I+ G+D E +Y D +G
Sbjct: 63 RAREYRVEHKRPIPIRALVNYVSLLLFYSRPYIYLVHSIVGGVDAEEGPVLYMVDWLGTV 122
Query: 140 ERANFRAGGSSGALLQALLD 159
+ + A GS + L+
Sbjct: 123 TKEKYIATGSGSPYAKGALE 142
>gi|332158405|ref|YP_004423684.1| proteasome subunit beta [Pyrococcus sp. NA2]
gi|331033868|gb|AEC51680.1| proteasome, subunit beta [Pyrococcus sp. NA2]
Length = 216
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 90/237 (37%), Gaps = 57/237 (24%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYR---PTYNFLMIFTIT 77
G TTV + D I+A+DT+ S + + T K+ D + MI I
Sbjct: 25 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 84
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ Y + MST ++A ++S ++ R+FPY II G E + + DP+G
Sbjct: 85 EAEARYYQFTWGRPMSTKAMANLLSNILNENRWFPYLVQIIIGGYVEE--PTIANLDPLG 142
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
++ A GS A+L+
Sbjct: 143 GLIFEDYTATGSGTPFALAILEE------------------------------------- 165
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD-GVHLCAITKDGIKE 253
G+R + +EKA + A AA RD+YTG V + ITKDG++E
Sbjct: 166 ----GYRKN-------LGIEKAKDLAIKAIKAAGSRDVYTGSKKVQVMTITKDGMRE 211
>gi|126138200|ref|XP_001385623.1| hypothetical protein PICST_62487 [Scheffersomyces stipitis CBS
6054]
gi|126092901|gb|ABN67594.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 206
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFT 75
P S NGG+ VA+ G D IA D RL K+F D + T + T
Sbjct: 4 PSSINGGSAVAMVGKDCIAIACDLRLGNQSLGLANNFEKIFQFGDKTFLGLTGLASDVTT 63
Query: 76 IT-ILPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
++ + F+ +Y + + +LA ++S +Y KRF PY+ I+AGLD + K +
Sbjct: 64 LSEVFRFKNNLYKLREERQIEPKTLANLVSSTLYEKRFGPYFIGPIVAGLDSKTSKPFIC 123
Query: 132 SYDPIGHTERA 142
+D IG + A
Sbjct: 124 GFDLIGCIDFA 134
>gi|193788711|ref|NP_001123295.1| proteasome subunit beta type-3 [Danio rerio]
gi|29124577|gb|AAH49010.1| Psmb3 protein [Danio rerio]
Length = 205
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IASD R + T + K+F + Y +
Sbjct: 1 MSIMSYNGGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T++ L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPRTFMSMVSNLLYERRFGPYYIEPVIAGLDPK 115
>gi|148677981|gb|EDL09928.1| mCG1283 [Mus musculus]
Length = 205
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFT 75
PY NGG +A+ G + IA+D + T + K+F D Y I T
Sbjct: 5 PY--NGGAVMAMKGKNCVAIAADRCFGIQAQMVTTDFQKIFALGDRLYIGLAGLATDIQT 62
Query: 76 ITI-LPFQM--YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVY 131
+ L F++ Y+ + + + +L M++ ++Y KRF PYYT +IAGLDP+ K +
Sbjct: 63 VAQRLKFRLNLYMLKEGRHIKPFTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKLFIC 122
Query: 132 SYDPIG 137
S D IG
Sbjct: 123 SLDLIG 128
>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 205
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 94/247 (38%), Gaps = 67/247 (27%)
Query: 25 GTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILP---- 80
GT V + D ++A++ R++ G+ +++R K+F + + I +I IL
Sbjct: 10 GTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFK------VNDNIGIASIGILADMQV 63
Query: 81 --------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYS 132
+Y + S S AK++S +++ R PY+ ++ G+D EG ++
Sbjct: 64 LTKIAKAYMSLYALDTKTRPSIRSAAKLLSYVLFANRVLPYFVEVLVGGVDDEGP-HLFI 122
Query: 133 YDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINA 192
D +G ++ A G+ L A+L++
Sbjct: 123 MDSLGSLIEDDYAAVGTGTKLAIAILESNY------------------------------ 152
Query: 193 LSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
K + +++A + A + RD +GDG+ + IT +G
Sbjct: 153 ------------------KPSMTVKEARELAIKAINQSISRDPVSGDGIDILTITGNGSA 194
Query: 253 EYNFPLR 259
E PL+
Sbjct: 195 EETIPLQ 201
>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus voltae
A3]
gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
voltae A3]
Length = 215
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 64/243 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV +A D ++A+D R + G I +E KL+ D Y + + I
Sbjct: 10 GTTTVGIACADGVVLATDKRATMGNLIADKEAKKLYPIDEYIAMTIAGSVGDAQSLVRII 69
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-----PEGKGCVYS 132
++Y MS + ++S +++G R FP I+ G D P+ +YS
Sbjct: 70 SAETKIYKMRTGNNMSPLACTTLMSNVLHGNRHFPLMNQLIVGGYDVCNDEPQ----LYS 125
Query: 133 YDPIGH-TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
D +G E F + GS +L+ + +N
Sbjct: 126 LDAVGGINEETTFTSTGSGSPTAYGVLEAEY---------------------------VN 158
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
L KT L+ A+ A ++A +RD Y+G+G+ L I K+G+
Sbjct: 159 KL-----------------KTSAALKLAVK----AISSAMKRDAYSGNGISLAKIDKNGV 197
Query: 252 KEY 254
K Y
Sbjct: 198 KIY 200
>gi|326509597|dbj|BAJ87014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHY------YYRPTYNFL 71
S + NG VA+ G + IASD RL + ++F + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYIGLSGLASDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S M+Y KRF PY+ IIAGL + + +
Sbjct: 62 TLYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSS 150
+ D IG E A +F G++
Sbjct: 122 TMDCIGAKELAKDFVVSGTA 141
>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 205
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 93/241 (38%), Gaps = 55/241 (22%)
Query: 25 GTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILP---- 80
GT V + D ++A++ R++ G+ +++R K+F + ++ + +L
Sbjct: 10 GTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGMASIGILADMQVLTKIAK 69
Query: 81 --FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGH 138
+Y + S S AK++S +++ R PY+ ++ G+D EG ++ D +G
Sbjct: 70 AYMSLYSLDTKTRPSIRSAAKLLSYVLFSNRILPYFVEVLVGGIDDEGP-HLFIMDALGS 128
Query: 139 TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLT 198
++ A G+ L A+L++
Sbjct: 129 LIEDDYAAVGTGTKLAIAILESNY------------------------------------ 152
Query: 199 ILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPL 258
K + +++A + A + RD +GDG+ + IT +G E PL
Sbjct: 153 ------------KPGMSIKEARDLAIKAINQSISRDPVSGDGIDILTITGNGSTEETIPL 200
Query: 259 R 259
+
Sbjct: 201 Q 201
>gi|242064246|ref|XP_002453412.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
gi|241933243|gb|EES06388.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
Length = 204
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + ++F D Y + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNNEPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDCIGAKELAKDFVVSGTASESL 145
>gi|168036644|ref|XP_001770816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677875|gb|EDQ64340.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTI-TI 78
NG +A+ G + IASD RL + + ++F D Y + + T+
Sbjct: 7 NGSALIAMVGKNCFAIASDRRLGVNFQTIACDFQRIFKIHDKLYIGLSGLATDVQTMHQR 66
Query: 79 LPF--QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
L F ++Y + M + A ++S ++Y KRF PY+ IIAGL+ +G + + D I
Sbjct: 67 LQFRHKLYQLREERNMRPETFASLVSAILYEKRFGPYFCEPIIAGLNDDGTPFICTTDLI 126
Query: 137 GHTERA-NFRAGGSSGALL 154
G + A +F G++ L
Sbjct: 127 GAKQLAKDFVVSGTASESL 145
>gi|240849169|ref|NP_001155482.1| proteasome beta 3 subunit-like [Acyrthosiphon pisum]
gi|239792821|dbj|BAH72708.1| ACYPI002587 [Acyrthosiphon pisum]
Length = 205
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTI--- 76
NGG + + G D IA+D R + + +K+F H + IFT+
Sbjct: 7 NGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTFMGFPGLATDIFTVYEK 66
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP---EGKGCVYSY 133
+ ++Y + N+ +S +LA ++S ++Y RF P++ +I LD E C
Sbjct: 67 IMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPYMC--DM 124
Query: 134 DPIGHTERA-NFRAGGSSGALLQALLD 159
D IG ++ NF GG+S + L L +
Sbjct: 125 DLIGCVNKSDNFVVGGTSSSQLYGLCE 151
>gi|330835873|ref|YP_004410601.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329568012|gb|AEB96117.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 196
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 96/233 (41%), Gaps = 60/233 (25%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--------DHYYYRPTYNFLMIFTIT 77
T V V D I+ + RLS G + ++ K+F + I
Sbjct: 7 TAVGVKVQDGIILGAVRRLSYGGYVLSKSAKKVFPIARFGIGGAGLFGDLQALTRIMNAN 66
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
I +++Y +N+ +ST + AK++SI++Y ++ P+ + + G+D +G+ +Y DP+G
Sbjct: 67 IKYYELY---NNRPISTKAAAKLLSIILYQYKYMPFISEVLFGGVD-DGQPQLYVLDPLG 122
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+ A GS + +G+++ + +++ G +L
Sbjct: 123 SLLDDVYAAVGSGARV-------SIGVLEAEYNESMTLMQG----------------KEL 159
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
TI + A+AERD+ +GDG+ + I++DG
Sbjct: 160 TI-------------------------KSLRASAERDVTSGDGIDILTISRDG 187
>gi|19075485|ref|NP_587985.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|17380272|sp|Q9Y7T8.1|PSB3_SCHPO RecName: Full=Probable proteasome subunit beta type-3
gi|4539605|emb|CAB40016.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe]
Length = 204
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTI 76
NGG+ VA+AG + IASD RL T K+F D Y T + ++ +
Sbjct: 7 NGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDVQTLYEL 66
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+Y + + + A ++S +Y KRF PY++ ++AG+ + + +D I
Sbjct: 67 FRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFICGFDSI 126
Query: 137 GHTERA-NFRAGGSSGALLQALLDN 160
G + A +F G++ L + ++
Sbjct: 127 GCIDFAEDFIVSGTATEQLYGMCES 151
>gi|348521013|ref|XP_003448021.1| PREDICTED: proteasome subunit beta type-3-like [Oreochromis
niloticus]
Length = 202
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 4 NGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+
Sbjct: 64 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPK 112
>gi|49388033|dbj|BAD25149.1| Proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|215768995|dbj|BAH01224.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 204
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + ++F D Y + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDCIGAKELAKDFVVSGTASESL 145
>gi|321456221|gb|EFX67334.1| hypothetical protein DAPPUDRAFT_231791 [Daphnia pulex]
Length = 205
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTITI- 78
NGG +A+ G IASD R + + ++F+ H Y L T+T+
Sbjct: 7 NGGCVLAMKGKGCVAIASDRRFGVQTSTLAMDFQRIFEMGPHLYI--GLPGLATDTLTVH 64
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
L F++ L+E ++ + + + M+S ++Y +RF PY+ +IAGLDP
Sbjct: 65 ERLRFRLNLYELRESRKIKPQTFSAMVSNLLYERRFGPYFVEPVIAGLDP 114
>gi|125538349|gb|EAY84744.1| hypothetical protein OsI_06114 [Oryza sativa Indica Group]
gi|125581051|gb|EAZ21982.1| hypothetical protein OsJ_05637 [Oryza sativa Japonica Group]
Length = 213
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTI 76
NG VA+ G + IASD RL + ++F D Y + + ++
Sbjct: 16 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQR 75
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ ++Y + M + A ++S ++Y KRF PY+ +IAGL + + + D I
Sbjct: 76 LVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFICTMDCI 135
Query: 137 GHTERA-NFRAGGSS 150
G E A +F G++
Sbjct: 136 GAKELAKDFVVSGTA 150
>gi|217075224|gb|ACJ85972.1| unknown [Medicago truncatula]
Length = 204
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL I T Q SK+ D + + +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDSQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y M + A ++S M Y KRF PY+ +IAGL + K +
Sbjct: 62 TLYQRLVFRHKLYQLREECDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDAIGAKELAKDFVVAGTASESL 145
>gi|392577300|gb|EIW70429.1| hypothetical protein TREMEDRAFT_68051 [Tremella mesenterica DSM
1558]
Length = 210
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Query: 23 NGGTTVAVAGPDYAIIASDTRL---SAGYNIYTREQSKLFDHYYYRPTYNFLMIFTI-TI 78
NGG+ VA+ G D IASD RL S G + + + D YY ++T+
Sbjct: 7 NGGSVVAMIGKDCVAIASDLRLGQQSVGVAMNFDKVFPVNDKLYYGLPGLATDVYTLREQ 66
Query: 79 LPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG------LDPEGKGCV 130
L F+ MY + + ++ + ++S +Y KRF PY+ ++AG LDP K +
Sbjct: 67 LRFRVNMYRMKEEREITPKTFTHLVSSTLYEKRFGPYFIEPVVAGLPSPTELDPHPKPFI 126
Query: 131 YSYDPIGH-TERANFRAGGSS 150
+ D IG T +F G++
Sbjct: 127 STMDTIGCITTPKDFAVAGTA 147
>gi|18312192|ref|NP_558859.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74565305|sp|Q8ZYF2.1|PSB1_PYRAE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18159629|gb|AAL63041.1| proteasome beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 202
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTITIL 79
TTV +A D ++A+D R++AGY I + K++ DH + + + + L
Sbjct: 3 TTVGIAVKDGVVLATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLTL 62
Query: 80 PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHT 139
Y E+ + + ++L +S++++ R + Y +II G+D E +Y D +G
Sbjct: 63 RAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMVDWLGTV 122
Query: 140 ERANFRAGGSSGALLQALLD 159
+ + A GS + L+
Sbjct: 123 TKEKYIATGSGSPYAKGALE 142
>gi|326934090|ref|XP_003213128.1| PREDICTED: proteasome subunit beta type-3-like [Meleagris
gallopavo]
Length = 205
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F + Y +
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMITTDFQKIFPMGERLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
T+ L F++ L+E + + + M+S ++Y +RF PYYT +IAGLDP
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDP 114
>gi|225703360|gb|ACO07526.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G IA+D R + T + K+F D + +
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQVVTTDFQKIFPMGDRLHIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T++ L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPK 115
>gi|327311458|ref|YP_004338355.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326947937|gb|AEA13043.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 199
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 57/234 (24%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL-----MIFTITI 78
TTV + D ++A+D R++AGY I + K++ D + + ++ T+TI
Sbjct: 3 TTVGIKARDGVVLATDKRVTAGYYIAHKRGEKIWKIDEHVAATMSGGVADLQGLLSTLTI 62
Query: 79 LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGH 138
L + Y EH + + +L S++++ R Y +I G D EG +Y D +G
Sbjct: 63 LA-RDYKTEHRRPIPVKTLVNYASLLLFYSRPVIYIVHSIFGGFDDEGP-QLYMLDWLGS 120
Query: 139 TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLT 198
+ + GS +L+
Sbjct: 121 YSEERYISTGSGSPYAMGVLE--------------------------------------- 141
Query: 199 ILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+G+R VD +A+ + ++A AA D +G+G+ + ITKDG +
Sbjct: 142 --VGYREDMTVD-------EAVKLAENAVKAAMRNDPGSGEGIDIVTITKDGFR 186
>gi|357138383|ref|XP_003570772.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL------ 71
S + NG VA+ G + IASD RL + ++F + Y L
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFK--VHEKLYIGLSGLATD 59
Query: 72 --MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
++ + ++Y + M + A ++S ++Y KRF PY+ IIAGL +
Sbjct: 60 AQTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGDNDQPF 119
Query: 130 VYSYDPIGHTERA-NFRAGGSSGALL 154
+ + D IG E A +F G++ L
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESL 145
>gi|357123202|ref|XP_003563301.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHY------YYRPTYNFL 71
S + NG VA+ G + IASD RL + ++F + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYLGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ IIAGL + + +
Sbjct: 62 TLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGEDNEPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSS 150
+ D IG E A +F G++
Sbjct: 122 TMDCIGAKELAKDFVVSGTA 141
>gi|290993280|ref|XP_002679261.1| predicted protein [Naegleria gruberi]
gi|284092877|gb|EFC46517.1| predicted protein [Naegleria gruberi]
Length = 205
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD-HYYYRPTYNFLMIFTITI--- 78
NG VA+ G + IA+DTR + K+F H N L T+
Sbjct: 7 NGAGIVAMTGKNCVAIAADTRYGIRQQTVGTDMQKIFKIHDKLFIGLNGLATDVQTVNEK 66
Query: 79 LPFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSYDP 135
L F+M ++ + + + +S A ++S ++Y KRF P++ +IAGL+ PE K + + D
Sbjct: 67 LKFRMNMYNLKEERDIKPSSFANLMSNILYEKRFGPWFIEPVIAGLEGPENKPFICAQDL 126
Query: 136 IGH-TERANFRAGGSSGALLQALLDN 160
IG NF G+ L + ++
Sbjct: 127 IGAPCFTDNFVVSGTCSEALYGMCES 152
>gi|126308249|ref|XP_001371633.1| PREDICTED: proteasome subunit beta type-3-like [Monodelphis
domestica]
Length = 202
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 2 SYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVA 61
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGL P+
Sbjct: 62 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLHPK 112
>gi|11498092|ref|NP_069317.1| proteasome subunit beta [Archaeoglobus fulgidus DSM 4304]
gi|17380266|sp|Q9P996.1|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
Length = 213
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 96/245 (39%), Gaps = 66/245 (26%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI--------- 73
G TTV + D ++A++ R + G I ++ K+ Y+ M
Sbjct: 10 KGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKI-----YQIADRMAMTTAGSVGDAQ 64
Query: 74 FTITILPFQMYLHEHNKVMSTT--SLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
F I+ + L+E + T ++A + S ++ R+FPY +I G+D EGK +Y
Sbjct: 65 FLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGK-SIY 123
Query: 132 SYDPIGHT-ERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
S DPIG E + A GS +L+++ T EI
Sbjct: 124 SIDPIGGAIEEKDIVATGSGSLTAYGVLEDR------------------------FTPEI 159
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
+++A+ + A +A +RD +GDG+ + IT+D
Sbjct: 160 G------------------------VDEAVELAVRAIYSAMKRDSASGDGIDVVKITEDE 195
Query: 251 IKEYN 255
+Y+
Sbjct: 196 FYQYS 200
>gi|432957515|ref|XP_004085833.1| PREDICTED: proteasome subunit beta type-3-like [Oryzias latipes]
Length = 205
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ G + IA+D R + T + K+F + Y +
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 74 FTITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T++ L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+ +
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKSFEPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|70606469|ref|YP_255339.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066683|ref|YP_007433765.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449068957|ref|YP_007436038.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
gi|121697373|sp|Q4JAY3.1|PSB1_SULAC RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|68567117|gb|AAY80046.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449035191|gb|AGE70617.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449037465|gb|AGE72890.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
Length = 195
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 96/236 (40%), Gaps = 60/236 (25%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYR--------PTYNFLMIFTIT 77
T + + D ++A++ RLS G + ++ K+F + I +
Sbjct: 7 TAIGIKTKDGVVLAAERRLSYGDFVLSKSARKVFKLGRFGIAGAGIVGDIQTLTRIMNVE 66
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
I ++MY +++ +S + AK++S+++Y + PY + + G+D +G ++ DPIG
Sbjct: 67 IKYYEMY---NSRKISARAAAKLLSVILYQNKVLPYISELLFGGVDEDGP-KLFILDPIG 122
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
++ A GS + +L+ + ++ +LT E
Sbjct: 123 SLIEDSYAAVGSGARVAIGVLEAE--------------------YNESLTSE-------- 154
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
E AI +K +A ERD+ +GDG+ + I K+ I E
Sbjct: 155 ----------------AAKELAIKSMK----SAVERDVMSGDGIDILIINKNNIYE 190
>gi|27450761|gb|AAO14683.1|AF508264_1 beta 3 subunit of 20S proteasome [Pyrocystis lunula]
Length = 214
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT-YNFLMIFTIT---- 77
NG VA+AG IASDTR Y + + ++ T F+ I +
Sbjct: 8 NGSAIVAMAGDGCVGIASDTR----YGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQ 63
Query: 78 ----ILPFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+L F++ L + M ++ +IS ++Y KRF PY+T ++AGLD + +
Sbjct: 64 TMAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDKDHNPFLC 123
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
++D IG +A +F G+S L
Sbjct: 124 AFDFIGAMSKAQDFVVSGTSSEQL 147
>gi|156539935|ref|XP_001599218.1| PREDICTED: proteasome subunit beta type-3-like isoform 1 [Nasonia
vitripennis]
Length = 205
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYY-RPTYNFLMIFTITI 78
NGG +A+ G + IA+D R + K+++ H Y P +
Sbjct: 7 NGGAIIAMKGKNCVAIAADRRFGIQAQTISCNFQKIYEMGPHLYLGLPGLATDSQTVMER 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F++ L+E ++ + + MIS ++Y +RF PY+ I+AGLDPE
Sbjct: 67 LRFRLNLYELKESRTIHPKTFGSMISNLLYERRFGPYFVEPIVAGLDPE 115
>gi|242096488|ref|XP_002438734.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
gi|241916957|gb|EER90101.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
Length = 204
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + ++F D Y + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDVPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDCIGAKELAKDFVVSGTASESL 145
>gi|389852762|ref|YP_006354996.1| proteasome, subunit beta [Pyrococcus sp. ST04]
gi|388250068|gb|AFK22921.1| putative proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 173
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 71/174 (40%), Gaps = 50/174 (28%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTER 141
++Y K MS +LA +++ ++ G ++FPY+ ++ G D E + ++S D G
Sbjct: 40 RLYKANVGKPMSVKALATLLANILNGTKYFPYFVWFLVGGYDEEPR--MFSVDMAGGVTE 97
Query: 142 ANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILL 201
+ A GS ++LD++
Sbjct: 98 DKYVAAGSGMEFAYSVLDSEY--------------------------------------- 118
Query: 202 GFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
K + +++ I + A A +RD+++GDG+ + IT++G +EY+
Sbjct: 119 ---------KEDLSVKEGIKLAVKAINVAIKRDVFSGDGILVVTITREGYQEYS 163
>gi|380485463|emb|CCF39344.1| hypothetical protein CH063_10204 [Colletotrichum higginsianum]
Length = 58
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 214 VPLEK--AISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
VPLE+ A +VKDAF A ER I GD + + ITK+GI+E PL+KD
Sbjct: 9 VPLERKEAEILVKDAFDGAVERHIEVGDHLQMMIITKNGIEEVLLPLKKD 58
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ- 82
G TT A+ D ++A+DTR SAG I R K+ + + M + Q
Sbjct: 19 GTTTCALTCKDGVVLAADTRASAGLFIADRHVMKI-----QKVDQHLAMTIAGGVADAQN 73
Query: 83 ----------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYS 132
+Y ++ ++M S A++ S +++ +R+FPYY I+AG +++
Sbjct: 74 LVDTMRYNANLYRFQNKELMPVKSAARLCSNILFNQRYFPYYVQIIMAGYTKNEGSQIHN 133
Query: 133 YDPIGHTERANFRAGGSSGALLQALLDNQ 161
D G F + GS + L+++
Sbjct: 134 IDLFGSMTTEKFISTGSGSPVAYGYLESE 162
>gi|145590322|ref|YP_001152324.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595706|sp|A4WH05.1|PSB1_PYRAR RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145282090|gb|ABP49672.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum arsenaticum
DSM 13514]
Length = 202
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 55/235 (23%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTITIL 79
TTV + D ++A+D R++AGY I ++ KL+ DH + + I + +
Sbjct: 3 TTVGIVVKDGVVLATDKRVTAGYYIAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLTV 62
Query: 80 PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHT 139
+ Y + + + +L +S++++ R + Y +II G+D E +Y D +G
Sbjct: 63 RAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVHSIIGGVDEEEGAVMYMVDWLGTV 122
Query: 140 ERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTI 199
+ + A GS + +L+
Sbjct: 123 TKEKYVATGSGSPYAKGVLE---------------------------------------- 142
Query: 200 LLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITK-DGIKE 253
+G+R V E+A+ + +A AA D +G+G+ + ITK DG K
Sbjct: 143 -VGYRGDLTV-------EEAVDLAINAIKAAIRNDPGSGEGIDVVTITKRDGFKR 189
>gi|34859236|ref|XP_215842.2| PREDICTED: proteasome subunit beta type-3-like [Rattus norvegicus]
gi|109470850|ref|XP_001081206.1| PREDICTED: proteasome subunit beta type-3-like [Rattus norvegicus]
Length = 205
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTI 76
S S NGG A G + IA+D + T + K+F YR + + T
Sbjct: 1 MSIMSYNGGAITATKGKNCVAIAADRHFRIQAQMVTTDFQKIFP-MGYRLYIDLAGLGTD 59
Query: 77 TI-----LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KG 128
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K
Sbjct: 60 VQTVAQHLKFRLNLYELKEGQQIKPYTLLSMVANLLYEKRFGPYYTEPVIAGLDPKTFKP 119
Query: 129 CVYSYDPIGHTERAN-FRAGGSSGALLQALLDN 160
+ S D IG + N F G+ + + ++
Sbjct: 120 FICSLDLIGCSMVTNDFVVSGTCSEQMYGMCES 152
>gi|294879946|ref|XP_002768837.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239871775|gb|EER01555.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-------- 74
NGG+ +A+ G IA D R Y + + Y T L+ F
Sbjct: 246 NGGSVIAMKGEGCVGIACDRR----YGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDSQ 301
Query: 75 TIT-ILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
T++ +L F++ L++ ++ M ++ +++ M+Y KRF PY+ +IAGL +G+ +
Sbjct: 302 TLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFIS 361
Query: 132 SYDPIG 137
S+D IG
Sbjct: 362 SFDLIG 367
>gi|307109788|gb|EFN58025.1| hypothetical protein CHLNCDRAFT_48590 [Chlorella variabilis]
Length = 204
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT 77
S + NG VA+AG + I SD R + K++ + + + T
Sbjct: 2 SIFEYNGSAIVAMAGKECVAIGSDLRFGVQLQTLATDYKKVY-KIHDQLFIGLAGLGTDA 60
Query: 78 ILPFQMYLHEHN-------KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCV 130
Q + +HN + + ++ +++S +Y +RF PY+ +IAGL+P+G +
Sbjct: 61 ETLSQRFAFKHNLYKLREERDIKPSAFGQLVSATLYERRFGPYFCQPVIAGLEPDGSPYL 120
Query: 131 YSYDPIGHTERA-NFRAGGSS 150
D IG E A +F G++
Sbjct: 121 CGMDSIGAQETAKDFMVAGTA 141
>gi|156849065|ref|XP_001647413.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
70294]
gi|156118099|gb|EDO19555.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
70294]
Length = 205
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI 78
P S NGG VA+ G D IA D RL + K+F + + L +T+
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGNQSLGVSNNFEKIFHYGHVFLGITGLATDVLTL 63
Query: 79 -----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
+Y ++++ + +++S +Y +RF PY+ ++AG++ + GK +
Sbjct: 64 SEEFRYKTNLYKLREDRLIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAG 123
Query: 133 YDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 124 FDLIGCIDEAKDFIVSGTASDQLFGMCES 152
>gi|294929626|ref|XP_002779296.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239888359|gb|EER11091.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-------- 74
NGG+ +A+ G IA D R Y + + Y T L+ F
Sbjct: 246 NGGSVIAMKGEGCVGIACDRR----YGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDSQ 301
Query: 75 TIT-ILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
T++ +L F++ L++ ++ M ++ +++ M+Y KRF PY+ +IAGL +G+ +
Sbjct: 302 TLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFIS 361
Query: 132 SYDPIG 137
S+D IG
Sbjct: 362 SFDLIG 367
>gi|326488821|dbj|BAJ98022.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512002|dbj|BAJ95982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHY------YYRPTYNFL 71
S + NG VA+ G + IASD RL + ++F + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYIGLSGLASDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ IIAGL + +
Sbjct: 62 TLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGENDQPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSS 150
+ D IG E A +F G++
Sbjct: 122 TMDCIGAKELAKDFVVSGTA 141
>gi|226504734|ref|NP_001140276.1| uncharacterized protein LOC100272320 [Zea mays]
gi|194698808|gb|ACF83488.1| unknown [Zea mays]
Length = 204
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYT-----REQSKLFDHYYYRPT---YN 69
S + NG VA+ G + IASD RL G + T R K+ D Y + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRL--GVQLQTIATDFRRVFKVHDKLYIGLSGLATD 59
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL +
Sbjct: 60 AQTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPF 119
Query: 130 VYSYDPIGHTERA-NFRAGGSSGALL 154
+ + D IG E A +F G++ L
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESL 145
>gi|356515898|ref|XP_003526634.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
type-3-A-like [Glycine max]
Length = 204
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRL-------SAGYNIYTREQSKLFDHYYYRPTYNFLMIFT 75
NG VA+ G + IASD RL + + ++ KLF T + ++
Sbjct: 7 NGSALVAMVGKNCFAIASDRRLGVQPQTTATDFQRISKIHDKLFIGLXGLAT-DAQTLYQ 65
Query: 76 ITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDP 135
+ ++Y + M + A ++S ++Y RF PY+ +IAGL + K + + D
Sbjct: 66 RLLFGHKLYQLREERDMKPQTFASLVSAILYENRFGPYFCQPVIAGLGDDDKPFICTMDA 125
Query: 136 IGHTERA-NFRAGGSS 150
IG E A +F G++
Sbjct: 126 IGAKELAKDFAVAGTA 141
>gi|154308476|ref|XP_001553574.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 198
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 98/240 (40%), Gaps = 50/240 (20%)
Query: 30 VAGPDYAIIASDTRLSAGYNIYTREQSKLFDH---YYYRPTYNFLMIFTITIL---PFQM 83
+ G D IA D RL + K+F + Y T + T++ L M
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVSTVSDLFRYKVNM 60
Query: 84 YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTERA 142
Y + +S T++A ++S +Y +RF P++ S ++AGLD + GK + +D IG + A
Sbjct: 61 YRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLDQKTGKPFICGFDSIGCIDFA 120
Query: 143 -NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILL 201
+F G+ +S Q+ G+ DL L+S++
Sbjct: 121 KDFIVSGT------------------ASDQLFGTCEGLWEPDL--------LNSQI---- 150
Query: 202 GFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
+ P L + IS A A +RD +G G H+ I KD + + R+D
Sbjct: 151 ---------QGPEDLFETIS---QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 198
>gi|448591212|ref|ZP_21650891.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
gi|445733768|gb|ELZ85333.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
Length = 243
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 63/237 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI----- 78
G TTV + D ++A+D R S GY + +++ K+ + + PT + +++
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIH---PTAALTIAGSVSAAQSLI 105
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
L ++ L+E + MS +L+ ++ + FF I+ G+D +G G +YS D
Sbjct: 106 SNLKAEVRLYEARRGEDMSMQALSTLVGNFLRSGAFF--VVQPILGGVDEDG-GHIYSID 162
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G + GS +L+ + S
Sbjct: 163 PAGSILEEEYTVTGSGSQYALGVLERE-------------------------------YS 191
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
LT+ ++A V +A AA ERD+ +G+G+++ +T +G+
Sbjct: 192 DDLTV-----------------DEAKQVATNAIRAAVERDLASGNGINIAVVTDEGV 231
>gi|256070135|ref|XP_002571401.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646867|emb|CCD58588.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 205
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
NG +A++G D A IA D R + + +K++ R F + T FQ
Sbjct: 7 NGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVY-PLGPRLYVGFPGLATDNQTVFQ 65
Query: 83 -------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSYD 134
MY NK + ++ M+S ++Y +RF PY+ +IAG+D K V D
Sbjct: 66 RLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPYVACMD 125
Query: 135 PIGHTERAN 143
IG AN
Sbjct: 126 LIGCVCEAN 134
>gi|387017850|gb|AFJ51043.1| Proteasome subunit beta type-3-like [Crotalus adamanteus]
Length = 205
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 18/120 (15%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTI 76
S S NGG +A+ G + IA+D R + + K+F P + L I
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVATDFQKIF------PMGDRLFIGLA 54
Query: 77 TI----------LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
+ L F++ L+E + + +L M+S ++Y +RF PYYT +IAGL+P
Sbjct: 55 GLATDVQTVAQRLKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLNP 114
>gi|171184537|ref|YP_001793456.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595728|sp|B1YA36.1|PSB1_THENV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|170933749|gb|ACB39010.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 201
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTITIL 79
TTV +A + ++A+D R++AGY I ++ K++ DH + + + + L
Sbjct: 3 TTVGIAVREGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSVLSFLTL 62
Query: 80 PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHT 139
+ Y E+ + + +L +S++++ R + Y +II G+D E +Y D +G
Sbjct: 63 RAREYKMEYKRPIPIRALVNYVSLILFYSRPYIYIVHSIIGGVDDEEGAVLYMADWLGTV 122
Query: 140 ERANFRAGGSSGALLQALLD 159
+ + A GS + L+
Sbjct: 123 TKERYIATGSGSPYAKGALE 142
>gi|291225400|ref|XP_002732675.1| PREDICTED: proteasome beta 3 subunit-like [Saccoglossus
kowalevskii]
Length = 205
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH----YYYRPTYNFLMIFTITI 78
NG VA+ G D IA+D R + + K+F+ Y P +
Sbjct: 7 NGSAVVAMKGKDCVAIAADRRFGIQAQTVSMDFQKIFEMGPRLYLGLPGLATDVQTVSNR 66
Query: 79 LPFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F++ L+ N+ + + M+S ++Y +RF PY+ IIAGL+P+ + + S D
Sbjct: 67 LKFRLNLYTLRENRKIKPKTFMSMVSNLLYERRFGPYFVEPIIAGLEPDTYEPFICSLDL 126
Query: 136 IGH-TERANFRAGGSSGALLQALLDN 160
IG +F G+S L + ++
Sbjct: 127 IGCPMVPEDFVVAGTSSEQLYGMCES 152
>gi|448576104|ref|ZP_21642147.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
gi|445729784|gb|ELZ81378.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
Length = 243
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 63/237 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI----- 78
G TTV + D ++A+D R S GY + +++ K+ + + PT + +++
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIH---PTAALTIAGSVSAAQSLI 105
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
L ++ L+E + MS +L+ ++ + FF I+ G+D +G G +YS D
Sbjct: 106 SNLKAEVRLYEARRGEDMSMQALSTLVGNFLRSGAFF--VVQPILGGVDEDG-GHIYSID 162
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G L E
Sbjct: 163 PAGSI----------------------------------------------LEEEYTVTG 176
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
S LG +E D V ++A V +A AA ERD+ +G+G+++ +T +G+
Sbjct: 177 SGSQYALGVLEREYSDDLSV--DEAKQVATNAIRAAVERDLASGNGINIAVVTDEGV 231
>gi|3114278|pdb|1RYP|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114292|pdb|1RYP|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513421|pdb|1G65|I Chain I, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513435|pdb|1G65|W Chain W, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|20150385|pdb|1JD2|I Chain I, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150392|pdb|1JD2|P Chain P, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|93279376|pdb|2F16|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279390|pdb|2F16|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032210|pdb|2FAK|I Chain I, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032224|pdb|2FAK|W Chain W, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490851|pdb|2GPL|I Chain I, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490865|pdb|2GPL|W Chain W, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016375|pdb|3D29|I Chain I, Proteasome Inhibition By Fellutamide B
gi|190016389|pdb|3D29|W Chain W, Proteasome Inhibition By Fellutamide B
gi|197725329|pdb|3E47|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725343|pdb|3E47|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939220|pdb|3DY3|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939234|pdb|3DY3|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939248|pdb|3DY4|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939262|pdb|3DY4|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828245|pdb|3GPJ|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828259|pdb|3GPJ|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588329|pdb|3GPT|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588343|pdb|3GPT|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588357|pdb|3GPW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588371|pdb|3GPW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588551|pdb|3HYE|I Chain I, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588565|pdb|3HYE|W Chain W, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508231|pdb|1VSY|J Chain J, Proteasome Activator Complex
gi|298508245|pdb|1VSY|X Chain X, Proteasome Activator Complex
gi|298508447|pdb|3L5Q|N Chain N, Proteasome Activator Complex
gi|298508461|pdb|3L5Q|Z Chain Z, Proteasome Activator Complex
gi|330689389|pdb|3MG4|I Chain I, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689403|pdb|3MG4|W Chain W, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361152|pdb|3MG0|I Chain I, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361166|pdb|3MG0|W Chain W, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892349|pdb|3OKJ|I Chain I, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892363|pdb|3OKJ|W Chain W, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780427|pdb|3OEU|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780441|pdb|3OEU|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780455|pdb|3OEV|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780469|pdb|3OEV|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610680|pdb|3TDD|I Chain I, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610694|pdb|3TDD|W Chain W, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545854|pdb|3SHJ|I Chain I, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545868|pdb|3SHJ|W Chain W, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|390980824|pdb|3SDI|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980838|pdb|3SDI|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980852|pdb|3SDK|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980866|pdb|3SDK|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550740|pdb|4GK7|I Chain I, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550754|pdb|4GK7|W Chain W, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|409973868|pdb|4FZC|I Chain I, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973882|pdb|4FZC|W Chain W, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973896|pdb|4FZG|I Chain I, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973910|pdb|4FZG|W Chain W, 20s Yeast Proteasome In Complex With Glidobactin
Length = 204
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLMIFTI 76
P S NGG VA+ G D IA D RL + + + K+F H + T + T+
Sbjct: 3 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDVTTL 62
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
+ +Y + + + + +++S +Y +RF PY+ ++AG++ + GK +
Sbjct: 63 NEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAG 122
Query: 133 YDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 123 FDLIGCIDEAKDFIVSGTASDQLFGMCES 151
>gi|254570058|ref|XP_002492139.1| Beta 3 subunit of the 20S proteasome involved in
ubiquitin-dependent catabolism [Komagataella pastoris
GS115]
gi|238031936|emb|CAY69859.1| Beta 3 subunit of the 20S proteasome involved in
ubiquitin-dependent catabolism [Komagataella pastoris
GS115]
gi|328351376|emb|CCA37775.1| 20S proteasome subunit beta 3 [Komagataella pastoris CBS 7435]
Length = 205
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT 77
+P S NGG+ VA+ G D IA D RL K+F + L IT
Sbjct: 3 NPASINGGSAVAMVGKDCVAIACDLRLGNQSLGVANNFEKVFQFGHVFLGLTGLATDVIT 62
Query: 78 I-----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVY 131
+ +Y + + + A ++S +Y KRF PY+ I+AG++ + + +
Sbjct: 63 LNETFRFKTNLYKMREERDIEPETFANLVSTSLYEKRFGPYFVGPIVAGINSKTNQPFIC 122
Query: 132 SYDPIG 137
S+D IG
Sbjct: 123 SFDSIG 128
>gi|398364611|ref|NP_011020.3| proteasome core particle subunit beta 3 [Saccharomyces cerevisiae
S288c]
gi|141337|sp|P25451.1|PSB3_YEAST RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Macropain subunit PUP3; AltName:
Full=Multicatalytic endopeptidase complex subunit PUP3;
AltName: Full=Proteasome component PUP3
gi|11514000|pdb|1G0U|I Chain I, A Gated Channel Into The Proteasome Core Particle
gi|11514014|pdb|1G0U|W Chain W, A Gated Channel Into The Proteasome Core Particle
gi|14488814|pdb|1FNT|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488828|pdb|1FNT|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765708|pdb|1Z7Q|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765722|pdb|1Z7Q|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|178847468|pdb|2ZCY|I Chain I, Yeast 20s Proteasome:syringolin A-Complex
gi|178847482|pdb|2ZCY|W Chain W, Yeast 20s Proteasome:syringolin A-Complex
gi|178847510|pdb|3BDM|I Chain I, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847524|pdb|3BDM|W Chain W, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462944|pdb|3NZJ|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462958|pdb|3NZJ|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462972|pdb|3NZW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462986|pdb|3NZW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463000|pdb|3NZX|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463014|pdb|3NZX|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|333361180|pdb|3MG6|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361194|pdb|3MG6|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361208|pdb|3MG7|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361222|pdb|3MG7|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361236|pdb|3MG8|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361250|pdb|3MG8|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|378792249|pdb|3UN4|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792263|pdb|3UN4|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792283|pdb|3UN8|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792297|pdb|3UN8|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|403071956|pdb|4B4T|3 Chain 3, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|403072200|pdb|4G4S|J Chain J, Structure Of Proteasome-Pba1-Pba2 Complex
gi|444302347|pdb|4INR|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302361|pdb|4INR|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302375|pdb|4INT|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302389|pdb|4INT|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302403|pdb|4INU|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302417|pdb|4INU|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|172337|gb|AAA34946.1| ORF1 [Saccharomyces cerevisiae]
gi|603332|gb|AAB64649.1| Pup3p [Saccharomyces cerevisiae]
gi|151944812|gb|EDN63071.1| 20S proteasome subunit beta3_sc [Saccharomyces cerevisiae YJM789]
gi|190405659|gb|EDV08926.1| proteasome component PUP3 [Saccharomyces cerevisiae RM11-1a]
gi|256271461|gb|EEU06515.1| Pup3p [Saccharomyces cerevisiae JAY291]
gi|259146019|emb|CAY79279.1| Pup3p [Saccharomyces cerevisiae EC1118]
gi|285811728|tpg|DAA07756.1| TPA: proteasome core particle subunit beta 3 [Saccharomyces
cerevisiae S288c]
gi|323305263|gb|EGA59010.1| Pup3p [Saccharomyces cerevisiae FostersB]
gi|323333773|gb|EGA75164.1| Pup3p [Saccharomyces cerevisiae AWRI796]
gi|323337981|gb|EGA79220.1| Pup3p [Saccharomyces cerevisiae Vin13]
gi|323355291|gb|EGA87116.1| Pup3p [Saccharomyces cerevisiae VL3]
gi|349577761|dbj|GAA22929.1| K7_Pup3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766114|gb|EHN07615.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 205
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLMIFTI 76
P S NGG VA+ G D IA D RL + + + K+F H + T + T+
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDVTTL 63
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
+ +Y + + + + +++S +Y +RF PY+ ++AG++ + GK +
Sbjct: 64 NEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAG 123
Query: 133 YDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 124 FDLIGCIDEAKDFIVSGTASDQLFGMCES 152
>gi|385806007|ref|YP_005842405.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
gi|383795870|gb|AFH42953.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
Length = 211
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 98/248 (39%), Gaps = 66/248 (26%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
+G TTV + D I+A+D R +AG I R+ K+ + T + + Q
Sbjct: 18 HGTTTVGLIAKDAVILAADRRATAGTFIAHRKTRKIL-----KITDKMALTTAGLVADAQ 72
Query: 83 MYLHEHNKVMSTTSLAK-----------MISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
+ N M+ ++ K ++S+++Y + FP+Y I+ G D + ++
Sbjct: 73 VLADWLNTQMNYLTITKKQPVTVREAAHLLSLLLYRYKLFPFYVQLILGGYDTAPR--LF 130
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
S D G + + GS + +L++
Sbjct: 131 SLDLYGSLVEEKYTSTGSGSPIAIGVLED------------------------------- 159
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
G+R EN+ +P E+A + A A +RD TGDGV IT +GI
Sbjct: 160 ----------GYR--ENM--SP---EEARKLAVKAVQMALKRDSATGDGVDSVIITSEGI 202
Query: 252 KEYNFPLR 259
KE++ P++
Sbjct: 203 KEFSDPVQ 210
>gi|413954658|gb|AFW87307.1| proteasome subunit beta type [Zea mays]
Length = 204
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + ++F D Y + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYIGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D +G E A +F G++ L
Sbjct: 122 TMDCLGAKELAKDFVVSGTASESL 145
>gi|413943569|gb|AFW76218.1| hypothetical protein ZEAMMB73_756098 [Zea mays]
Length = 204
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + ++F D Y + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D +G E A +F G++ L
Sbjct: 122 TMDCLGAKELAKDFVVSGTASESL 145
>gi|226505280|ref|NP_001141963.1| uncharacterized protein LOC100274112 [Zea mays]
gi|194706600|gb|ACF87384.1| unknown [Zea mays]
Length = 204
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL + ++F D Y + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYIGLSGLATDAQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D +G E A +F G++ L
Sbjct: 122 TMDCLGAKELAKDFVVSGTASESL 145
>gi|313126409|ref|YP_004036679.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|448286253|ref|ZP_21477487.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
borinquense DSM 11551]
gi|445575086|gb|ELY29568.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
Length = 243
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 96/238 (40%), Gaps = 63/238 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI----- 78
G TTV + D ++A+D R S G+ + ++ K+ + + PT + +++
Sbjct: 49 GTTTVGLKTEDGVVLATDMRASLGHMVSSKNVQKVEEIH---PTGALTIAGSVSAAQSLI 105
Query: 79 ----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
++Y + MS +L+ ++ + F Y I+ G D EG +YS D
Sbjct: 106 RSIRAEVRLYESRRGEDMSMQALSTLLGNFLRSGAF--YIVQPILGGFDDEG-AHIYSID 162
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G ++L+ + + S+ VL ++DL+
Sbjct: 163 PAG------------------SILEEEYTVTGSGSQYALGVLEQEYSNDLS--------- 195
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+E+A + A +A ERD+ +G+G+++C +T+DG++
Sbjct: 196 ---------------------IEEAKTTAARAIKSAVERDLASGNGINVCVVTEDGVE 232
>gi|383320533|ref|YP_005381374.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
gi|379321903|gb|AFD00856.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
Length = 207
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT------ 77
G TTV + + + A++ R + G I +R+ K+ Y+ T N M +
Sbjct: 8 GTTTVGIICNNGVVFATERRATMGTFIASRDAQKI-----YKLTDNIAMTIAGSVGDGQR 62
Query: 78 ---ILPFQMYLHEHNK--VMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYS 132
IL + L E + MS +L+ ++S ++ ++ P+Y +I G+D G +YS
Sbjct: 63 LARILQVEAKLFELRRHGPMSINALSMLLSNILAETKYMPFYVQVLIGGVDKSGPR-IYS 121
Query: 133 YDPI-GHTERANFRAGGSSGALLQALLDNQ 161
DP+ G E F + GS + +L+++
Sbjct: 122 LDPLGGRIEEVKFSSTGSGSPIAYGVLEDR 151
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 94/244 (38%), Gaps = 69/244 (28%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI--------- 73
G TTV + D ++A++ R + G I +R K+ Y+ T M
Sbjct: 8 KGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKI-----YKITDRIAMTTAGSVGDAQ 62
Query: 74 FTITILPFQMYLHEHNKVMSTT--SLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
F ++ + L+ K T ++A ++S ++ R+FPY +I G+D G +Y
Sbjct: 63 FLARLIKVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGVDKTG-AKIY 121
Query: 132 SYDPIGHT-ERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
S DPIG E + A GS + +L++
Sbjct: 122 SIDPIGGAIEEIDIVATGSGSPMAYGVLEDN----------------------------- 152
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
+R NVD +A+ + A +A +RD +GDG+ + IT+
Sbjct: 153 ------------YRKDINVD-------EAVELAIRAIYSAMKRDSASGDGIDVVKITE-- 191
Query: 251 IKEY 254
KEY
Sbjct: 192 -KEY 194
>gi|392299798|gb|EIW10890.1| Pup3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 205
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLMIFTI 76
P S NGG VA+ G D IA D RL + + + K+F H + T + T+
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDVTTL 63
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
+ +Y + + + + +++S +Y +RF PY+ ++AG++ + GK +
Sbjct: 64 NEMFRYKTNLYKLKEERTIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAG 123
Query: 133 YDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 124 FDLIGCIDEAKDFIVSGTASDQLFGMCES 152
>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
veneficus SNP6]
gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
veneficus SNP6]
Length = 214
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 92/239 (38%), Gaps = 66/239 (27%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI--------- 73
G TTV + D ++A++ R + G I +R K+ Y+ M
Sbjct: 10 KGTTTVGLICKDGIVLATEKRATIGNYIASRRAKKI-----YQVADRVAMTTAGSVGDAQ 64
Query: 74 FTITILPFQMYLHEHNKVMSTT--SLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
F ++ + L+E K T ++A M+S ++ R+FPY+ +I G+D G ++
Sbjct: 65 FLARLVKVEASLYETRKEEKPTVKAIATMLSNLLNSSRYFPYFVQLLIGGVDKRGP-SMF 123
Query: 132 SYDPIGHT-ERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
S DPIG E + A GS +L++ R
Sbjct: 124 SIDPIGGAIEETDIVATGSGSPTAYGVLED---------------------------RYY 156
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
++++ + L R A T+A +RD +GDG+ + ITKD
Sbjct: 157 PEITTQEGVELAIR---------------------AITSAMKRDSASGDGIDVVKITKD 194
>gi|207345904|gb|EDZ72572.1| YER094Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 187
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFLMIFTI 76
P S NGG VA+ G D IA D RL + + + K+F H + T + T+
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDVTTL 63
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
+ +Y + + + + +++S +Y +RF PY+ ++AG++ + GK +
Sbjct: 64 NEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAG 123
Query: 133 YDPIGHTERA 142
+D IG + A
Sbjct: 124 FDLIGCIDEA 133
>gi|307596440|ref|YP_003902757.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307551641|gb|ADN51706.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 216
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 62/243 (25%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQS----KLFDHYYYRPT------YNFLMI 73
G TTV + D ++A+D R++AGY I R++ K+ +H + L
Sbjct: 15 GTTTVGIVVNDGVVLATDRRVTAGYYIAHRKKGVKIWKIDNHVAATMSGGVADLQKVLDA 74
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
T T + +++ E K +S +LA S++++ R F Y I G DP+ +Y
Sbjct: 75 LTATAIQYKI---ETGKPISIRALANYASLIVFSSRPFIYLVHMIFGGWDPDEGPVIYML 131
Query: 134 DPIGH-TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINA 192
D G T F A GS +L++
Sbjct: 132 DFFGTLTRETEFMATGSGSPTAFGVLED-------------------------------- 159
Query: 193 LSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
G+R + +E AI + A +A D +G+G+ + ITK+G K
Sbjct: 160 ---------GYRRD-------MSIEDAIRLAVRAVRSAIYHDPGSGEGIDVVTITKEGYK 203
Query: 253 EYN 255
E N
Sbjct: 204 EVN 206
>gi|429858056|gb|ELA32890.1| proteasome component pup3 [Colletotrichum gloeosporioides Nara gc5]
Length = 191
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTE 140
MY + ++ T+ A ++S +Y +RF PY+ S ++AGLDP+ GK + +D IG +
Sbjct: 58 NMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCID 117
Query: 141 RA-NFRAGGSSGALLQALLDN 160
A +F G++ L + ++
Sbjct: 118 FAKDFIVSGTASEQLFGMCES 138
>gi|62318933|dbj|BAD94023.1| proteasome component C5 [Arabidopsis thaliana]
Length = 56
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 212 TPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
TP+ +A+ +VK F +A ERDIYTGD + + + DGIK LRKD
Sbjct: 7 TPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 56
>gi|413935900|gb|AFW70451.1| proteasome subunit beta type [Zea mays]
Length = 305
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYT-----REQSKLFDHYYYRPT---YN 69
S + NG VA+ G + IASD RL G + T R K+ D Y + +
Sbjct: 103 SIFEYNGSAVVAMVGKNCFAIASDRRL--GVQLQTIATDFRRVFKVHDKLYIGLSGLATD 160
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGC 129
++ + ++Y + M + A ++S ++Y KRF PY+ +IAGL +
Sbjct: 161 AQTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPF 220
Query: 130 VYSYDPIGHTERA-NFRAGGSSGALL 154
+ + D IG E A +F G++ L
Sbjct: 221 ICTMDCIGAKELAKDFVVSGTASESL 246
>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex protein [Methanococcus aeolicus
Nankai-3]
gi|302595768|sp|A6UT20.1|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
Length = 217
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 88/239 (36%), Gaps = 55/239 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV + D ++A+D R + G I +E KL+ D Y + + I
Sbjct: 14 GTTTVGIVCNDGIVLATDKRATMGNLIADKEAKKLYKIDDYMAMTIAGSVGDAQSLVRII 73
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+Y + S A ++S +++G R FP+ II G D ++S D +G
Sbjct: 74 SAEANLYKLRTGNNIPPHSCAMLLSNVLHGSRHFPFLIQLIIGGYDTIHGAKLFSLDAVG 133
Query: 138 H-TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
E +F A GS +L+ +
Sbjct: 134 GLNEETSFTATGSGSPTAFGVLEEEY---------------------------------- 159
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
K + + K + + TAA +RD ++G+G+ L I K+G+K Y+
Sbjct: 160 --------------KKDMTINKGKLLAIKSLTAAMKRDAFSGNGISLAVIDKNGVKIYS 204
>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
Length = 241
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 99/253 (39%), Gaps = 65/253 (25%)
Query: 10 ETPIQHHFSPYSD--NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
ET + SP + G TTV + + ++A+D R S GY + +++ K+ PT
Sbjct: 31 ETERRAQASPDEEMKTGTTTVGLKTSEGVVLATDMRASMGYMVSSKDVQKV---EQIHPT 87
Query: 68 YNFLMIFTITI-------LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTI 118
+ +++ L + L+E + MS +LA +++ + FF I
Sbjct: 88 AALTIAGSVSAAQSLIRSLKAETSLYETRRGQDMSMQALATLLANFLRSGAFF--VVQPI 145
Query: 119 IAGLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGG 178
+ G+D EG VYS D +G N+ GS +L+ QH + +
Sbjct: 146 LGGVDEEGP-HVYSMDALGGMSEENYTVTGSGSQYALGVLE------QHYEEDLS----- 193
Query: 179 IRTHDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTG 238
+E+A +V A +A ERD+ +G
Sbjct: 194 -------------------------------------IEEAKTVAAKAIQSAVERDLASG 216
Query: 239 DGVHLCAITKDGI 251
+G+++ +T +G+
Sbjct: 217 NGINVAVVTDEGV 229
>gi|365761090|gb|EHN02766.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841875|gb|EJT44194.1| PUP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 205
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF---- 74
P S NGG VA+ G D IA D RL + + + K+F HY + FL I
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIF-HY----GHVFLGITGLAT 58
Query: 75 TITILPFQMYLHEHN-------KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-G 126
+T L +M+ ++ N + + + +++S +Y +RF PY+ ++AG++ + G
Sbjct: 59 DVTTLN-EMFRYKTNLYKLREERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSG 117
Query: 127 KGCVYSYDPIGHTERA-NFRAGGSSGALLQALLDN 160
K + +D IG + A +F G++ L + ++
Sbjct: 118 KPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES 152
>gi|256070137|ref|XP_002571402.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646868|emb|CCD58589.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 194
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
NG +A++G D A IA D R + + +K++ R F + T FQ
Sbjct: 7 NGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYP-LGPRLYVGFPGLATDNQTVFQ 65
Query: 83 -------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSYD 134
MY NK + ++ M+S ++Y +RF PY+ +IAG+D K V D
Sbjct: 66 RLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPYVACMD 125
Query: 135 PIGHTERAN 143
IG AN
Sbjct: 126 LIGCVCEAN 134
>gi|367011527|ref|XP_003680264.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
gi|359747923|emb|CCE91053.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
Length = 205
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI----F 74
P S NGG VA+AG D IASD RL + + + K+F HY + FL I
Sbjct: 4 PSSINGGIVVAMAGKDCVAIASDLRLGSQSLGVSNKFEKIF-HY----GHVFLGITGLAT 58
Query: 75 TITILP------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-K 127
+T L +Y ++ + + +++S +Y +RF PY+ ++AG++ + K
Sbjct: 59 DVTTLSETFRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKTEK 118
Query: 128 GCVYSYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+ +D IG + A +F G++ L + ++
Sbjct: 119 PFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES 152
>gi|17380265|sp|Q9P992.1|PSB_METTE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|790625|gb|AAA91642.1| beta-type proteasome subunit [Methanosarcina thermophila TM-1]
Length = 210
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV V D ++AS+ R + G+ I ++ K++ D T + + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ Q+Y ++ M+ + ++S + R++P +I G+D G G +YS D +G
Sbjct: 69 SVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPG-IYSLDAMG 127
Query: 138 HT-ERANFRAGGSSGALLQALLDNQ 161
+ E A GS + +L++Q
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQ 152
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 96/246 (39%), Gaps = 65/246 (26%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
G TTV +A D+ ++A+D + +AG + + K+ R T N + + Q
Sbjct: 30 RGTTTVGMALKDFVVLAADKKATAGLYVAHKNVKKIV-----RLTENSAITIAGLVADAQ 84
Query: 83 M-----------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
Y + +N+ MS S+A ++ +++ ++FP+ I+ G D ++
Sbjct: 85 TLADYIRAEAYYYYYINNRPMSIRSMASLLGLILNEYKYFPFIVQLILGGYDYYEGAKLF 144
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
S D G + A GS + +G+I+
Sbjct: 145 SIDYFGDVTEERYTATGSGSPI-------AIGVIES------------------------ 173
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD-GVHLCAITKDG 250
G+R + ++D A+S+V A A+ RD+++G GV + I KD
Sbjct: 174 ----------GYRPEMSID-------DAVSLVVKAVATASMRDVFSGGIGVDVVVIGKDF 216
Query: 251 IKEYNF 256
+E F
Sbjct: 217 YREMTF 222
>gi|322705678|gb|EFY97262.1| proteasome component PUP3 [Metarhizium anisopliae ARSEF 23]
Length = 191
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 50/182 (27%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTE 140
MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ GK + +D IG +
Sbjct: 58 NMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCID 117
Query: 141 RA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTI 199
A +F G+ +S+Q+ + G+ D+
Sbjct: 118 FAKDFIVSGT------------------ASEQLFGMCEGLWEEDMG-------------- 145
Query: 200 LLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLR 259
P L + IS A A +RD +G G H+ I KD + + R
Sbjct: 146 -------------PDALFETIS---QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGR 189
Query: 260 KD 261
+D
Sbjct: 190 QD 191
>gi|320101454|ref|YP_004177046.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753806|gb|ADV65564.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 209
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 25 GTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHY---YYRPTYNFLMIFTITI 78
GT + + + ++A++ RLS + +R K+ DH + + + +
Sbjct: 8 GTAIGLKTSEGVVLAAEKRLSYDGFVLSRNARKIHMVTDHVGVGFAGLMGDVGFLVKVLR 67
Query: 79 LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGH 138
L + Y +H + + S+AK++S+++Y + P T ++ G D EG +Y DP+G
Sbjct: 68 LEAKNYELQHGREIRARSMAKLLSLILYNYKLAPMLTEVVVGGFDDEGP-SLYILDPVGS 126
Query: 139 TERANFRAGGSSGAL 153
+ A GS L
Sbjct: 127 LIEEKYVAVGSGAQL 141
>gi|159041872|ref|YP_001541124.1| proteasome endopeptidase complex protein [Caldivirga maquilingensis
IC-167]
gi|302595705|sp|A8M8R5.1|PSB2_CALMQ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|157920707|gb|ABW02134.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
Length = 200
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 19/137 (13%)
Query: 25 GTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQMY 84
GTTV + D ++A++ R+S G+ + ++ K++ P N + + + IL
Sbjct: 10 GTTVGIKAKDGVVLAAEKRVSYGFYLMSKSGKKVY------PITNRIGLASSGILADIQT 63
Query: 85 LH------------EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYS 132
+ E + +S + AK++SIM++ ++ PY T++ G+D EG ++
Sbjct: 64 ITKVIRANIANMEIEMKRPVSVRAAAKLLSIMLFQNKYMPYIAETMVGGIDEEGP-KLFI 122
Query: 133 YDPIGHTERANFRAGGS 149
D G +F A G+
Sbjct: 123 LDSWGSLIEDDFAALGN 139
>gi|393911865|gb|EFO27070.2| proteasome subunit beta type-3 [Loa loa]
Length = 205
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-- 74
S S +GGT +A+AG D IASD RL K+ H Y L F
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKV--HKLGEKVYIGLGGFHS 58
Query: 75 ----TITILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGK 127
+ + F+ L+E N+ + A M+S ++Y RF Y+T +IAGLDP K
Sbjct: 59 DAKTVLDKITFRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNK 118
Query: 128 GCVYSYDPIGHTERAN 143
+ + D IG N
Sbjct: 119 PYICAMDTIGCISAPN 134
>gi|196002749|ref|XP_002111242.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
gi|190587193|gb|EDV27246.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
Length = 191
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 30 VAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI---LPFQ- 82
+ G + IA+D R E +++ DH Y ++ L T+ L F+
Sbjct: 1 MTGKNCVAIAADRRFGIQAQTIGHEFQRIYGMSDHLYI--GFSGLATDVTTVSNKLKFRL 58
Query: 83 -MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
MY+ N+ M + ++S ++Y KRF PY+ +IAGLD K V S D IG
Sbjct: 59 NMYMLRENREMKPETFMSLVSSLLYEKRFGPYFVEPVIAGLDKNAKPFVGSLDLIG 114
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 89/235 (37%), Gaps = 57/235 (24%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD-HYYYRPT-----YNFLMIFTI 76
G TTV + ++A+D R G I ++ K+F H Y T + I +
Sbjct: 9 KGTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDL 68
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYG--KRFFPYYTSTIIAGLDPEGKGCVYSYD 134
++Y HN+++S +LA MIS +++ K F PY I+ G + + +Y+ D
Sbjct: 69 MRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDDDP-ALYNLD 127
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G ++ A GS +L+ +
Sbjct: 128 PSGSIIEEDYTATGSGSPTAYGVLEAEY-------------------------------- 155
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
+ + L+ AI V A +A ERD TG+GV + IT++
Sbjct: 156 ----------------EEGMSLDDAIEVAVRAVKSALERDTGTGEGVTVVTITRE 194
>gi|402589044|gb|EJW82976.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 205
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-- 74
S S +GGT +A+AG D IASD RL K+ H Y L F
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKV--HKLGEKVYIGLGGFNS 58
Query: 75 ----TITILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGK 127
+ + F+ L+E N+ + A M+S ++Y RF Y+T +IAGLDP K
Sbjct: 59 DAKTVLDKITFRKNLYELRENRKIKPEVTAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNK 118
Query: 128 GCVYSYDPIGHTERAN-FRAGGS 149
+ + D IG N F A G+
Sbjct: 119 PYICAMDTIGCISAPNDFVAVGT 141
>gi|255083731|ref|XP_002508440.1| predicted protein [Micromonas sp. RCC299]
gi|226523717|gb|ACO69698.1| predicted protein [Micromonas sp. RCC299]
Length = 207
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYT----REQSKLFDHYYYRPTYNFLM 72
S S NG +A+ G + IASD R T ++ K+ DH Y + L
Sbjct: 1 MSIMSYNGAAIIAMCGKECVAIASDLRFGINQQQTTAVDMKKIYKIHDHLYV--GLSGLA 58
Query: 73 IFTITI-----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
T+ MY ++ M + A ++S M+Y KRF PYY I+AGLD
Sbjct: 59 TDQATLAQRFKFRHNMYELRESRKMRPETFANLVSTMLYEKRFGPYYAEPIVAGLD 114
>gi|448365027|ref|ZP_21553597.1| proteasome endopeptidase complex subunit beta [Natrialba aegyptia
DSM 13077]
gi|445656698|gb|ELZ09531.1| proteasome endopeptidase complex subunit beta [Natrialba aegyptia
DSM 13077]
Length = 243
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 62/228 (27%)
Query: 34 DYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT-------ITILPFQMYLH 86
D +IA+D R S G + + + + + PT M+ + I+ L ++ L+
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIH--PTGALTMVGSVGGAQSFISSLRAEVNLY 115
Query: 87 E--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANF 144
E + MS +LA + G FF + I+ G+D EG VYS DP G
Sbjct: 116 EARRGEPMSIDALATLAGNFARGGPFFAIH--PILGGVDSEGS-HVYSIDPAG------- 165
Query: 145 RAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFR 204
G+ D +T S + + G
Sbjct: 166 ---------------------------------GVMEDDYTVT------GSGMQLAYGLL 186
Query: 205 NQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
QE D + + A ++ A +AAERD +G+GV LC IT +G++
Sbjct: 187 EQEYEDG--LSNDDATTIAARAIKSAAERDTGSGNGVFLCEITDEGVE 232
>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830823|ref|YP_002832603.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773795|ref|YP_005646362.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385776430|ref|YP_005648998.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|302595724|sp|D2PDG6.1|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595743|sp|C3MZI0.1|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595744|sp|C4KIR0.1|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595746|sp|C3NFX2.1|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595751|sp|C3MRE5.1|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595758|sp|C3MY41.1|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595897|sp|C3N7K2.1|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 196
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 54/236 (22%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYY----RPTYNFLMIFT-ITILP 80
T + + D ++AS+ RLS G + +++ K+ + Y L T I +
Sbjct: 7 TAIGLKVNDGIVLASERRLSYGGYVLSKQAKKVHKIGKFLMAGAGIYGDLQTLTRIMNVE 66
Query: 81 FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTE 140
+ Y K +S + AK++S+++Y + P+ + + G+D +G +Y DPIG
Sbjct: 67 IKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGP-QLYVLDPIGSLI 125
Query: 141 RANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTIL 200
N+ A GS + +L+++ +D + +I A
Sbjct: 126 EDNYAAVGSGARIAIGVLESE--------------------YDPNMNLDIAA-------- 157
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
++ A A+ ERDI +GDG+ L + K G E F
Sbjct: 158 --------------------QLITKAIKASIERDITSGDGIDLAIMDKKGNYENKF 193
>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 51/175 (29%)
Query: 84 YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERAN 143
Y + + + LAK++S+++Y + P T ++ G D +G +Y DP+G
Sbjct: 83 YELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGP-QIYVLDPVGSLIEDK 141
Query: 144 FRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGF 203
+ A GS G + +GII+ +
Sbjct: 142 YVALGSGGPI-------ALGIIEKE----------------------------------Y 160
Query: 204 RNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG--IKEYNF 256
R +VD+ + A+S +++A ERD +GDGV + IT++G ++EY F
Sbjct: 161 REDIDVDEAE---KLAVSAIREAI----ERDAVSGDGVDVLRITEEGYSLREYMF 208
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 93/244 (38%), Gaps = 58/244 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILP--- 80
G TTV + I+A+D R +AG I +R K+ Y ++ +L
Sbjct: 15 GTTTVGFITKNAVILAADKRATAGTLIASRTVKKIVKITDYAAMTIAGLVADAQMLADAI 74
Query: 81 ---FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
++Y + + ++ +A +++ +++ +++PY I+ G D E + +Y+ D G
Sbjct: 75 REEARLYETMNKRKLTVKGMATLLANVLFSTKYYPYLVQLIVGGYDTEPR--LYNLDYFG 132
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
+ GS + +L+
Sbjct: 133 SITEEKMTSTGSGSPVALGVLEK------------------------------------- 155
Query: 198 TILLGFRNQENVDKTP-VPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
D P + LE+A+++ A A RD TGDGV + AI+ GI+E
Sbjct: 156 ------------DYRPDLSLEEAMNLAAKAIKVAIMRDSATGDGVDVIAISSGGIRESFI 203
Query: 257 PLRK 260
PL++
Sbjct: 204 PLQQ 207
>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595716|sp|A8AB58.1|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 56/242 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKL--FDHYYYRPTYNFL----MIFTI 76
G TTV + ++A+D R +AG I + K+ Y T + ++ +
Sbjct: 12 KGTTTVGIRSEKAVVLAADKRATAGNFIVHKRVEKIVKISDYMAMTTAGLVADAQVLADV 71
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ + Y H K MS + A +S +++ RF+PY ++ G D + +YS D
Sbjct: 72 LRMEVKNYELFHKKRMSVKAAATFLSNVLHSARFYPYIVQLLVGGFDTAPR--LYSLDWF 129
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G F GS + VG+I+ E N
Sbjct: 130 GTVAEEEFLVTGSGSPM-------AVGVIEA---------------------EYN----- 156
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNF 256
N+D LE+ +++ A AA RD +G+G+ + I ++GI ++
Sbjct: 157 ----------PNMD-----LEELVNLAVRAVFAATRRDTASGEGIDVAVIDRNGITMRHY 201
Query: 257 PL 258
L
Sbjct: 202 RL 203
>gi|21355629|ref|NP_649858.1| proteasome beta3 subunit [Drosophila melanogaster]
gi|194903499|ref|XP_001980880.1| GG17403 [Drosophila erecta]
gi|195330532|ref|XP_002031957.1| GM26292 [Drosophila sechellia]
gi|195499293|ref|XP_002096887.1| GE24806 [Drosophila yakuba]
gi|195572401|ref|XP_002104184.1| GD20828 [Drosophila simulans]
gi|17380236|sp|Q9XYN7.1|PSB3_DROME RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome subunit beta-3
gi|4559288|gb|AAD22968.1|AF116898_1 20S proteasome beta3 subunit [Drosophila melanogaster]
gi|7299121|gb|AAF54320.1| proteasome beta3 subunit [Drosophila melanogaster]
gi|20151995|gb|AAM11357.1| LD16402p [Drosophila melanogaster]
gi|116806244|emb|CAL26545.1| CG11981 [Drosophila melanogaster]
gi|116806246|emb|CAL26546.1| CG11981 [Drosophila melanogaster]
gi|116806248|emb|CAL26547.1| CG11981 [Drosophila melanogaster]
gi|116806250|emb|CAL26548.1| CG11981 [Drosophila melanogaster]
gi|116806252|emb|CAL26549.1| CG11981 [Drosophila melanogaster]
gi|116806254|emb|CAL26550.1| CG11981 [Drosophila melanogaster]
gi|116806256|emb|CAL26551.1| CG11981 [Drosophila melanogaster]
gi|116806258|emb|CAL26552.1| CG11981 [Drosophila melanogaster]
gi|116806260|emb|CAL26553.1| CG11981 [Drosophila simulans]
gi|190652583|gb|EDV49838.1| GG17403 [Drosophila erecta]
gi|194120900|gb|EDW42943.1| GM26292 [Drosophila sechellia]
gi|194182988|gb|EDW96599.1| GE24806 [Drosophila yakuba]
gi|194200111|gb|EDX13687.1| GD20828 [Drosophila simulans]
gi|220942808|gb|ACL83947.1| Prosbeta3-PA [synthetic construct]
gi|223967619|emb|CAR93540.1| CG11981-PA [Drosophila melanogaster]
gi|223967621|emb|CAR93541.1| CG11981-PA [Drosophila melanogaster]
gi|223967623|emb|CAR93542.1| CG11981-PA [Drosophila melanogaster]
gi|223967625|emb|CAR93543.1| CG11981-PA [Drosophila melanogaster]
gi|223967627|emb|CAR93544.1| CG11981-PA [Drosophila melanogaster]
gi|223967629|emb|CAR93545.1| CG11981-PA [Drosophila melanogaster]
gi|223967631|emb|CAR93546.1| CG11981-PA [Drosophila melanogaster]
gi|223967633|emb|CAR93547.1| CG11981-PA [Drosophila melanogaster]
gi|223967635|emb|CAR93548.1| CG11981-PA [Drosophila melanogaster]
gi|223967637|emb|CAR93549.1| CG11981-PA [Drosophila melanogaster]
gi|223967639|emb|CAR93550.1| CG11981-PA [Drosophila melanogaster]
Length = 205
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT--ITI-- 78
NGG VA+ G D IA+D R + + K+F H R + T +T+
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVF-HIGPRMFLGLTGLQTDILTVRD 65
Query: 79 -LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F+ L+E N+ M + M+S +Y RF PY+ ++AGLDP+
Sbjct: 66 RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPK 115
>gi|294948700|ref|XP_002785851.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239899959|gb|EER17647.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 202
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-------- 74
NGG+ +A+ G IA D R Y + + Y T L+ F
Sbjct: 4 NGGSVIAMKGEGCVGIACDRR----YGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDSQ 59
Query: 75 TIT-ILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
T++ +L F++ L++ ++ M ++ +++ M+Y KRF PY+ +IAGL +G+ +
Sbjct: 60 TLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFIS 119
Query: 132 SYDPIGHTERA 142
S+D IG A
Sbjct: 120 SFDLIGTESTA 130
>gi|328862302|gb|EGG11403.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 201
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL 79
NGG+ +A+ G D IA D RL K+F D Y L T+T+
Sbjct: 4 NGGSVIAMVGKDCVAIACDLRLGNQALTVACNFEKVFPVTDKVYI--GLPGLASDTVTLR 61
Query: 80 P-----FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
MY + + + ++A ++S +Y KRF PY+ +IAGL+ + + + + D
Sbjct: 62 QQFRHRVNMYKMKEERTIEPETMAHLVSSTLYQKRFGPYFVEPVIAGLNSKNEPFIAATD 121
Query: 135 PIGHTERA-NFRAGGSS 150
IG A +F G++
Sbjct: 122 LIGCINFAKDFVVSGTA 138
>gi|170583083|ref|XP_001896421.1| proteasome subunit beta type 3 [Brugia malayi]
gi|158596348|gb|EDP34705.1| proteasome subunit beta type 3, putative [Brugia malayi]
Length = 205
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF-- 74
S S +GGT +A+AG D IASD RL K+ H Y L F
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKV--HKLGEKVYIGLGGFHS 58
Query: 75 ----TITILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGK 127
+ + F+ L+E N+ + A M+S ++Y RF Y+T +IAGLDP K
Sbjct: 59 DAKTVLDKITFRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNK 118
Query: 128 GCVYSYDPIGHTERAN 143
+ + D IG N
Sbjct: 119 PYICAMDTIGCISAPN 134
>gi|412992168|emb|CCO19881.1| predicted protein [Bathycoccus prasinos]
Length = 209
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Query: 29 AVAGPDYAIIASDTRLSAGYNIYT--------REQSKLF--------DHYYYRPTYNFLM 72
A+ G + IASD RL T + +LF D + + T+ F
Sbjct: 17 AMCGHECVAIASDNRLGINQQQTTAIDFQKIFQIHPRLFLAMSGLASDMHTLKATFEF-- 74
Query: 73 IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYS 132
++Y N+VM + A ++S +Y KRF PYY +IAGLD K +
Sbjct: 75 -------KHKLYELRENRVMEPKTFASVVSTTLYEKRFGPYYVEPVIAGLDKASKPYITG 127
Query: 133 YDPIGHTE-RANFRAGGSS 150
D IG NF G++
Sbjct: 128 MDLIGAAAPTENFVVAGNN 146
>gi|429964899|gb|ELA46897.1| hypothetical protein VCUG_01595 [Vavraia culicis 'floridensis']
Length = 205
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYY-----YRPTYNFLMIFT 75
GG+ +A+ G D AII SD RL + + +++ D Y + P L
Sbjct: 9 GGSVLALTGKDSAIIVSDKRLGNNSITVSMQHDRVYKMSDRVYVGMALFVPDIQML---- 64
Query: 76 ITILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+ L ++ L E N+ + ++S +Y RF P Y I+AG+D + + + S
Sbjct: 65 VRKLSKEVNLFEIGENRRIEPDEFCSLLSSTLYSNRFSPSYVDPIVAGIDVQNRPYICSM 124
Query: 134 DPIGHTERAN-FRAGGSSGALLQAL 157
D +G N F A G++ L L
Sbjct: 125 DLLGCQSTTNDFCAVGTAEDKLYGL 149
>gi|379005397|ref|YP_005261069.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
gi|375160850|gb|AFA40462.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
Length = 202
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTITIL 79
TTV + D ++A+D R++AGY I ++ KL+ DH + + I + +
Sbjct: 3 TTVGIVVKDGVVLATDKRVTAGYYIAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLTV 62
Query: 80 PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHT 139
+ Y + + + +L +S++++ R + Y +II G+D E +Y D +G
Sbjct: 63 RAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVHSIIGGVDEEEGAVMYMVDWLGTV 122
Query: 140 ERANFRAGGSSGALLQALLD 159
+ + A GS + +L+
Sbjct: 123 TKEKYVATGSGSPYAKGVLE 142
>gi|19073955|ref|NP_584561.1| 26S PROTEASOME BETA SUBUNIT, theta chain [Encephalitozoon cuniculi
GB-M1]
gi|19068597|emb|CAD25065.1| 26S PROTEASOME BETA SUBUNIT, theta chain [Encephalitozoon cuniculi
GB-M1]
gi|449329321|gb|AGE95594.1| 26S proteasome beta subunit, theta chain [Encephalitozoon cuniculi]
Length = 205
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 81 FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGH-T 139
+ ++ EH + M L+ MIS ++Y KR PY T+ I+AGL +GK + D IG
Sbjct: 72 YNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTSDGKPYISGMDCIGSIA 131
Query: 140 ERANFRAGGSSGALLQALLD 159
+F A G++ L + +
Sbjct: 132 SPGDFVAVGTADKNLMGICE 151
>gi|14520445|ref|NP_125920.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|74558522|sp|Q9V247.1|PSB1_PYRAB RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|5457660|emb|CAB49151.1| psmB proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380740969|tpe|CCE69603.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 197
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 57/237 (24%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYR---PTYNFLMIFTIT 77
G TTV + D I+A+DT+ S + + T K+ D + MI I
Sbjct: 6 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 65
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ Y + M+T ++A ++S ++ ++FPY II G E + + DP+G
Sbjct: 66 EAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTIANLDPLG 123
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
++ A GS A+L+
Sbjct: 124 GLIFDDYTATGSGTPFAIAILEE------------------------------------- 146
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD-GVHLCAITKDGIKE 253
G+R ++K E AI VK AA RD+YTG + + ITKDG+KE
Sbjct: 147 ----GYRKNLGIEKAK---ELAIKAVK----AAGARDVYTGSKKIQVVTITKDGMKE 192
>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
Length = 202
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 95/242 (39%), Gaps = 66/242 (27%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI---------FTI 76
TTV + D ++A++ R + G I ++ K+ Y+ M F
Sbjct: 2 TTVGLVCKDGVVMATEKRATMGNFIASKAAKKI-----YQIADRMAMTTAGSVGDAQFLA 56
Query: 77 TILPFQMYLHEHNKVMSTT--SLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
I+ + L+E + T ++A + S ++ R+FPY +I G+D EGK +YS D
Sbjct: 57 RIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGK-SIYSID 115
Query: 135 PIGHT-ERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
PIG E + A GS +L+++ T EI
Sbjct: 116 PIGGAIEEKDIVATGSGSLTAYGVLEDR------------------------FTPEIG-- 149
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
+++A+ + A +A +RD +GDG+ + IT+D +
Sbjct: 150 ----------------------VDEAVELAVRAIYSAMKRDSASGDGIDVVKITEDEFYQ 187
Query: 254 YN 255
Y+
Sbjct: 188 YS 189
>gi|89272044|emb|CAJ83196.1| proteasome (prosome macropain) subunit beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 194
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 28 VAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI-LPFQM 83
+A+ G D IA+D R + T + K+F D Y + T++ L F++
Sbjct: 1 MAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRL 60
Query: 84 YLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDPIGH-T 139
L+E + + + M++ ++Y +RF PYY +IAGLDP+ K + S D IG
Sbjct: 61 NLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIGCPM 120
Query: 140 ERANFRAGGSSGALLQALLDN 160
E +F G+ + + ++
Sbjct: 121 ETEDFVVSGTCSEQMYGMCES 141
>gi|156389516|ref|XP_001635037.1| predicted protein [Nematostella vectensis]
gi|156222126|gb|EDO42974.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH----YYYRPTYNFLMIFTITI 78
NG +A+ G + IA+D RL + + K+F + P + +
Sbjct: 7 NGAAIIAMVGKNCVAIAADRRLGIQAQTVSCDFQKIFQMGEKLFVGLPGLATDVQTISSR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDP 135
L F++ L+E + + + M+S ++Y +RF PY+ +IAGLDP+ + + S D
Sbjct: 67 LKFRLNLYELREGRPIKPKTFLSMVSNLLYERRFGPYFVEPVIAGLDPKTNEPFISSMDL 126
Query: 136 IGH-TERANFRAGGSSGALLQALLDN 160
IG E +F G+ + + ++
Sbjct: 127 IGCPMETKDFVVSGTCSEQMYGMCES 152
>gi|448351963|ref|ZP_21540757.1| proteasome endopeptidase complex subunit beta [Natrialba
taiwanensis DSM 12281]
gi|445632523|gb|ELY85735.1| proteasome endopeptidase complex subunit beta [Natrialba
taiwanensis DSM 12281]
Length = 243
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 62/228 (27%)
Query: 34 DYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT-------ITILPFQMYLH 86
D +IA+D R S G + + + + + PT M+ + I+ L ++ L+
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIH--PTGALTMVGSVGGAQSFISSLRAEVNLY 115
Query: 87 EHNK--VMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANF 144
E + MS +LA + G FF + I+ G+D EG VYS DP G
Sbjct: 116 EARRGDPMSIDALATLAGNFARGGPFFAIH--PILGGVDSEGS-HVYSIDPAG------- 165
Query: 145 RAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFR 204
G+ D +T S + + G
Sbjct: 166 ---------------------------------GVMEDDYTVT------GSGMQLAYGLL 186
Query: 205 NQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
QE D + + A ++ A +AAERD +G+GV LC IT +G++
Sbjct: 187 EQEYEDG--LANDDATTIAARAIKSAAERDTGSGNGVFLCEITDEGVE 232
>gi|21553663|gb|AAM62756.1| putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
Length = 204
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + N VA+ G + IASD RL I T Q SK+ D + + +
Sbjct: 2 SIFEYNVSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY +IAGL + K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFIC 121
Query: 132 SYDPIGHTERA-NFRAGGSSGALL 154
+ D IG E A +F G++ L
Sbjct: 122 TMDSIGAKELAKDFVVSGTASESL 145
>gi|226478644|emb|CAX72817.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
Length = 205
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
NG + ++G D A IA D R + + +K++ R F + T + FQ
Sbjct: 7 NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVY-SLGPRLYVGFPGLATDNQIVFQ 65
Query: 83 -------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSYD 134
MY N+ + ++ M+S ++Y +RF PY+ ++AG+D K V D
Sbjct: 66 RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125
Query: 135 PIGHTERAN 143
IG AN
Sbjct: 126 LIGCVCEAN 134
>gi|302306791|ref|NP_983166.2| ABR217Cp [Ashbya gossypii ATCC 10895]
gi|299788687|gb|AAS50990.2| ABR217Cp [Ashbya gossypii ATCC 10895]
gi|374106369|gb|AEY95279.1| FABR217Cp [Ashbya gossypii FDAG1]
Length = 205
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPT---YNFLMI 73
P S NGG VA+ G D IA D RL + + K+F+ H + T + +
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNRFEKIFNFGHVFLGLTGLATDVTTL 63
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKG-CVYS 132
+ MY + ++ + + ++++S +Y +RF PY+ ++AG+ + K +
Sbjct: 64 YETFRYKTNMYKMQEDRPIEPNTFSQLVSSTLYERRFGPYFVGPVVAGIHSKTKKPYIAG 123
Query: 133 YDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG E + +F G++ L + ++
Sbjct: 124 FDLIGCIEESKDFIVSGTASDQLFGMCES 152
>gi|449690724|ref|XP_002160822.2| PREDICTED: proteasome subunit beta type-3-like, partial [Hydra
magnipapillata]
Length = 196
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 8/151 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIF 74
S S NG VA+ G + IA+D R + + K F D + + I
Sbjct: 2 SVMSINGSALVAMKGKNCVAIAADRRYGVQFQTIACDFEKTFQMGDKLFLGLSGLATDIQ 61
Query: 75 TITILPF---QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCV 130
T+ F +Y N+ +S ++S ++YG+RF PY+ +IAGL P+ + +
Sbjct: 62 TVNCFFFFKTNLYELRENRKISPKVFMTIMSNILYGRRFGPYFVEPLIAGLHPKTNEPYI 121
Query: 131 YSYDPIGH-TERANFRAGGSSGALLQALLDN 160
S D IG E +F G+ G L + ++
Sbjct: 122 ASCDLIGCPCEPEDFVVSGTCGDQLYGMCES 152
>gi|47028283|gb|AAT09074.1| proteasome beta subunit [Bigelowiella natans]
Length = 204
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI- 78
NG VA+ G D IASD R + K+F D + + + T+
Sbjct: 7 NGSAIVAMVGKDCVAIASDMRYGIQQQTIACDMKKVFQMGDKLFIGLSGLLTDVQTLKQK 66
Query: 79 --LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+MY N+ M + ++S +Y KRF PY+ ++AGLD + + + D I
Sbjct: 67 FDFKLKMYSLRENRPMRPKVFSSLVSSTLYEKRFGPYFVEPVVAGLDAKEGPFIAAMDLI 126
Query: 137 G 137
G
Sbjct: 127 G 127
>gi|402467005|gb|EJW02389.1| hypothetical protein EDEG_03183 [Edhazardia aedis USNM 41457]
Length = 204
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYT--------REQSKLFDHY-YYRPTYNFLMIF 74
GG+ +AV + +D RL G N T + SKLF + P FL+
Sbjct: 8 GGSVLAVKSRNSIAFLTDLRLGQG-NFTTSMNFPKIHKITSKLFVGLPQFIPDAQFLL-- 64
Query: 75 TITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
I +++ N+ M L M+S ++Y +RF P +TS +IAG + G+ V D
Sbjct: 65 KKIIKNHNLFVLNENRPMEPEELTNMVSYILYSRRFTPLFTSPVIAGFNKFGEPYVSGMD 124
Query: 135 PIGH-TERANFRAGGSS 150
IG E +F G++
Sbjct: 125 QIGCLDEPEDFVVSGTA 141
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 92/238 (38%), Gaps = 64/238 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYY------YRPTYNFLMIF 74
G TTV + D + AS+ R S G + + K+F DH N + I
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 75 TITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
+ +QM +N MS + A + + ++ R P Y T++ G+D + K +YS D
Sbjct: 68 EAEVSLYQM---RNNDKMSVKAAASVTANIL---RSGPMYVQTLLGGMDGD-KPSLYSLD 120
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G + + GS + +L++ R H+ T E
Sbjct: 121 PAGGMIEDTYISTGSGSIVAYGVLED-------------------RYHEEITTDE----- 156
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
LE A+ +K AA+ERD ++G+G + +TKDG +
Sbjct: 157 --------------------GLEIAVRAIK----AASERDTFSGNGYLVAKVTKDGFE 190
>gi|37779068|gb|AAP20194.1| proteasome subunit [Pagrus major]
Length = 140
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + +A+D R + T + K+F + Y + T++
Sbjct: 5 SYNGGAVMAMRGKNCVAVAADRRFGIQAQMVTTDFQKVFPMGERLYIGLAGLATDVQTVS 64
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+
Sbjct: 65 QRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPK 115
>gi|50556674|ref|XP_505745.1| YALI0F22341p [Yarrowia lipolytica]
gi|49651615|emb|CAG78556.1| YALI0F22341p [Yarrowia lipolytica CLIB122]
Length = 206
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFL 71
+P NGG+ VA+ G D IA D R+ + + + K+F D+ Y T +
Sbjct: 3 NPQEINGGSCVAMVGKDCVAIACDLRMGSQGLGVSNDFEKVFNYGDNVYLGLTGLATDVQ 62
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCV 130
+ + +Y + + + A ++S +Y KRF PY+ I+AG++ + K +
Sbjct: 63 TLHEVFREKTNLYKMAEERQIEPETFANLVSSTLYEKRFGPYFVGPIVAGINSKTEKPFI 122
Query: 131 YSYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ +L + ++
Sbjct: 123 CGFDLIGCIDFAKDFIVSGTASDMLYGMCES 153
>gi|50309707|ref|XP_454865.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644000|emb|CAG99952.1| KLLA0E20197p [Kluyveromyces lactis]
Length = 205
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 12/133 (9%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI 78
P S NGG VA+ G D I D RL + K+F +Y + L +
Sbjct: 4 PSSINGGIVVAMTGKDCVAIGCDLRLGSQSLGVANNFEKIF---HYGHVFLGLTGLATDV 60
Query: 79 LPF--------QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGC 129
L +Y ++ + + +++S +Y KRF PY+ ++AG++ + GK
Sbjct: 61 LTLSESFRYKTNLYKLREDRPIEPETFTQLVSTSLYEKRFGPYFVGPVVAGINSKSGKPF 120
Query: 130 VYSYDPIGHTERA 142
+ +D IG + A
Sbjct: 121 IAGFDLIGCIDEA 133
>gi|448362754|ref|ZP_21551358.1| proteasome endopeptidase complex subunit beta [Natrialba asiatica
DSM 12278]
gi|445647376|gb|ELZ00350.1| proteasome endopeptidase complex subunit beta [Natrialba asiatica
DSM 12278]
Length = 243
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 83/228 (36%), Gaps = 62/228 (27%)
Query: 34 DYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT---------ILPFQMY 84
D +IA+D R S G + + + + + PT M+ ++ +Y
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIH--PTGALTMVGSVGGAQSFISSLRAEVNLY 115
Query: 85 LHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANF 144
+ MS +LA + G FF + I+ G+D EG VYS DP G
Sbjct: 116 GARRGEAMSIDALATLAGNFARGGPFFAIH--PILGGVDSEGS-HVYSIDPAG------- 165
Query: 145 RAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFR 204
G+ D +T S + + G
Sbjct: 166 ---------------------------------GVMEDDYTVT------GSGMQLAYGLL 186
Query: 205 NQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
QE D + + A ++ A +AAERD +G+GV LC IT +G++
Sbjct: 187 EQEYEDG--LSNDDATTIAARAIKSAAERDTGSGNGVFLCEITDEGVE 232
>gi|354611438|ref|ZP_09029394.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
gi|353196258|gb|EHB61760.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
Length = 243
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 51/170 (30%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTER 141
+Y + MS +L+ M S ++ G FF I+ G+D EG VYS DP
Sbjct: 113 NLYEARRGEYMSINALSTMASNLLRGGPFF--LVVPILGGVDEEGA-HVYSLDP------ 163
Query: 142 ANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILL 201
GGSS ++ + A S + L
Sbjct: 164 -----GGSS-----------------------------------MSDKYTAQGSGMPYAL 183
Query: 202 GFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
G QE D + +E+A V A +A+ERD +G+G+H+ IT DGI
Sbjct: 184 GVLEQEYTDD--LTMEEAERVGAQAVQSASERDTASGNGIHITRITADGI 231
>gi|313228966|emb|CBY18118.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTI 76
NGG+ V ++G + IASD R + + + K+F D + + + +
Sbjct: 6 NGGSIVGMSGDNCVCIASDNRYGQQLHTISTDFPKIFKITDKIFIGLSGLATDIQTVLNK 65
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
MY N+ MS M+S ++Y +RF P++ +I L+ +G + D +
Sbjct: 66 IKYKVNMYELRENRKMSPKCFKTMVSNLLYERRFGPFFAEPVIVALNDDGTTMLCGMDCL 125
Query: 137 GHTE 140
G E
Sbjct: 126 GAAE 129
>gi|442750507|gb|JAA67413.1| Putative 20s proteasome regulatory subunit beta type psmb3/pup3
[Ixodes ricinus]
Length = 205
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTITI- 78
NGG +A+ G + IA+D RL A + + ++F+ Y + + T+
Sbjct: 7 NGGVVIAMKGKECIAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLSGLATDVQTVAQR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVYSYDP 135
L F++ ++E + + + + ++S ++Y +RF PY+T +IAGLDP + + S D
Sbjct: 67 LKFRINMYELREGRRIKPKTFSSVVSNILYERRFGPYFTEALIAGLDPITNEPYIASTDL 126
Query: 136 IGH-TERANFRAGGSSG----ALLQALLDNQVG 163
IG +E +F G+ + +AL + +G
Sbjct: 127 IGCISEPEDFVVSGTCEEQCFGMCEALWEPDLG 159
>gi|440492147|gb|ELQ74741.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Trachipleistophora hominis]
Length = 205
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY---NFLMIFTIT 77
GG+ +A+ G AII SD RL + + +++ D Y T + M+
Sbjct: 9 GGSVLALTGKHSAIIVSDKRLGNNSITVSTQHDRVYKMSDKVYVGMTLFVPDVQMLVRKL 68
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ ++ E N+ + + ++S +Y RF P + ++AG+D K + S D +G
Sbjct: 69 RMEVNLFEIEENRRIDPDEFSSLLSYTLYSHRFSPRFVDPVVAGIDAHDKPYICSMDLLG 128
Query: 138 HTERAN-FRAGGSSGALLQAL 157
+N F A G++ L L
Sbjct: 129 CQSTSNDFCAVGTAEDKLYGL 149
>gi|430813166|emb|CCJ29467.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 179
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 32 GPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI-LPFQMYLHE 87
G D IASD RL G + T + SK+ + Y + I T+ I +Y +
Sbjct: 3 GKDCVAIASDLRLGKGGLMVTNDFSKIIPVTEKIYMGLSGLATDIVTLLIRYNVNLYKLQ 62
Query: 88 HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTERA-NFR 145
+V+ +LA ++S ++Y KRF Y+ I+AGLD + G+ + D IG + A +F
Sbjct: 63 EERVIEPKTLANLLSTVLYKKRFATYFVMPILAGLDSKTGRPFICGLDNIGCLDIAKDFV 122
Query: 146 AGGSS 150
G++
Sbjct: 123 ISGTA 127
>gi|328875472|gb|EGG23836.1| proteasome subunit beta type 3 [Dictyostelium fasciculatum]
Length = 201
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTI 76
NGG + + G + IA+D R + + K++ D + + + ++
Sbjct: 4 NGGAVIVMTGKNCVAIATDLRFGIQHQTVSNNHPKVYRINDKCFIGISGLVTDAQTLYQK 63
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ +Y + M+ L+ ++ M+Y KRF PY+T +I GLD + K + D I
Sbjct: 64 LVFRHNLYKLREERDMTPQVLSNLVGNMLYEKRFGPYFTEPVICGLDTQDKPFISGMDLI 123
Query: 137 G 137
G
Sbjct: 124 G 124
>gi|367052597|ref|XP_003656677.1| hypothetical protein THITE_2147182 [Thielavia terrestris NRRL 8126]
gi|347003942|gb|AEO70341.1| hypothetical protein THITE_2147182 [Thielavia terrestris NRRL 8126]
Length = 192
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 30 VAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL---PFQM 83
+AG D IA D RL + K+F DH + T + T+ L +
Sbjct: 1 MAGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVATVADLFRYKVNL 60
Query: 84 YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTERA 142
Y + ++ + A ++S +Y +RF P++ S ++AGLDP+ G+ + +D IG + A
Sbjct: 61 YRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLDPKTGQPFICGFDSIGCIDFA 120
Query: 143 -NFRAGGSS 150
+F G++
Sbjct: 121 KDFIVSGTA 129
>gi|429962770|gb|ELA42314.1| hypothetical protein VICG_00714 [Vittaforma corneae ATCC 50505]
Length = 205
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQM 83
GG+ +A+AG I SD RL G ++ ++F + T ++ I Q
Sbjct: 9 GGSILAMAGDGCVSIVSDYRLGNGPITTSKSFRRVF-----KITDRIVLGLPFFIPDAQY 63
Query: 84 YLHEHNKVMSTTSL-----------AKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYS 132
L + K +S L A + S ++Y R P YT+++IAG+D E K V
Sbjct: 64 LLKKIEKHVSLFKLMEGRDIEPKECANLASAILYSHRRSPLYTTSVIAGIDSENKPYVCD 123
Query: 133 YDPIG-HTERANFRAGGSSGALLQALLD 159
D +G TE NF A G++ L L +
Sbjct: 124 MDSLGCKTEPGNFVAEGTASTNLIGLCE 151
>gi|344249174|gb|EGW05278.1| Proteasome subunit beta type-3 [Cricetulus griseus]
Length = 194
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 28 VAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITI-LPFQM 83
+A+ G + IA+D R + T + K+F D Y + T+ L F++
Sbjct: 1 MAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL 60
Query: 84 YLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDPIG 137
L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K + S D IG
Sbjct: 61 NLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIG 117
>gi|322701542|gb|EFY93291.1| proteasome component PUP3 [Metarhizium acridum CQMa 102]
Length = 191
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTE 140
MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ GK + +D IG +
Sbjct: 58 NMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCID 117
Query: 141 RA-NFRAGGSSG----ALLQALLDNQVG 163
A +F G++ + + L + +G
Sbjct: 118 FAKDFIVSGTASEQLFGMCEGLWEEDMG 145
>gi|315231929|ref|YP_004072365.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315184957|gb|ADT85142.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 181
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 50/174 (28%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTER 141
++Y + MS +LA + + ++ G ++FPY+ +I G D K +YS D G
Sbjct: 47 KLYRARVGREMSVKALATLTANILNGTKYFPYFGWFLIGGYDE--KPNLYSVDMAGGMTE 104
Query: 142 ANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILL 201
+ + GS A+L+N+
Sbjct: 105 DKYVSAGSGMEFAYAVLENEY--------------------------------------- 125
Query: 202 GFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYN 255
K + +++ + + A A +RD++TGDG+ + ITK+G +E +
Sbjct: 126 ---------KEDMSVDEGVKLAVKAINTAIKRDVFTGDGILVVKITKEGYRELD 170
>gi|390346277|ref|XP_780413.3| PREDICTED: proteasome subunit beta type-3-like [Strongylocentrotus
purpuratus]
Length = 205
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTIT-I 78
NG VA+ G D IASD R + K+F Y + I T++
Sbjct: 7 NGSAVVAMIGKDCVGIASDRRFGVQAQTVSMNAQKIFTMGPRLYLGLSGLATDITTVSNR 66
Query: 79 LPFQMYLH--EHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYDP 135
L F++ L+ N+ + + M+S ++Y +RF PY+ +IAGLDP+ K + + D
Sbjct: 67 LKFRLNLYTLRENRDVKPETFMSMVSNLLYERRFGPYFIEPVIAGLDPKTYKPFICNLDL 126
Query: 136 IG 137
IG
Sbjct: 127 IG 128
>gi|367018856|ref|XP_003658713.1| hypothetical protein MYCTH_2055659 [Myceliophthora thermophila ATCC
42464]
gi|347005980|gb|AEO53468.1| hypothetical protein MYCTH_2055659 [Myceliophthora thermophila ATCC
42464]
Length = 192
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 30 VAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTITIL---PFQM 83
+ G D IA D RL + K+F DH + T + T+ L M
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVSTVADLFRYKVNM 60
Query: 84 YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTERA 142
Y + ++ + A ++S +Y +RF PY+ + ++AGL+P+ G + +D IG + A
Sbjct: 61 YRLREERHIAPRTFANLVSTTLYERRFGPYFVNPVVAGLEPKTGAPFICGFDSIGCIDFA 120
Query: 143 -NFRAGGSSGALLQALLDN 160
+F G++ L + +N
Sbjct: 121 KDFIVSGTATEQLYGMCEN 139
>gi|342890397|gb|EGU89215.1| hypothetical protein FOXB_00168 [Fusarium oxysporum Fo5176]
Length = 191
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 50/182 (27%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTE 140
MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ GK + +D IG +
Sbjct: 58 NMYRLREERSIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCID 117
Query: 141 RA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTI 199
A +F G+ +S+Q+ + G+ DL E +AL
Sbjct: 118 FAKDFIVSGT------------------ASEQLFGMCEGLWEPDL----EPDAL------ 149
Query: 200 LLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLR 259
+ + A +RD +G G H+ I KD + + R
Sbjct: 150 --------------------FETISQSLLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGR 189
Query: 260 KD 261
+D
Sbjct: 190 QD 191
>gi|68489003|ref|XP_711658.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
gi|46432977|gb|EAK92436.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
Length = 206
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLM 72
P+S NGG VA+ G I SD RL + K+F D + T + +
Sbjct: 4 PFSINGGAAVAMIGKGCIAIGSDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVIS 63
Query: 73 IFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVY 131
+ + +Y + + ++LA ++S +Y +RF P++ S I+AGL + K +
Sbjct: 64 LKELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFIC 123
Query: 132 SYDPIG 137
+D IG
Sbjct: 124 GFDSIG 129
>gi|156095029|ref|XP_001613550.1| 20S proteasome subunit beta-3 [Plasmodium vivax Sal-1]
gi|148802424|gb|EDL43823.1| 20S proteasome subunit beta-3, putative [Plasmodium vivax]
Length = 218
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKLF---DHYYYRPTYNFLMI 73
S ++ NGG + ++G IA D RL A + + +K+F D+ Y + I
Sbjct: 3 SIFNYNGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDI 62
Query: 74 FTI-TILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG------LDP 124
T+ +L +++ L+E M A M+S ++Y RF PY+ + I+ G LD
Sbjct: 63 QTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDD 122
Query: 125 EGKG-CVY-----SYDPIG-HTERANFRAGGSSGALLQALLDN 160
EGK C + +YD IG E +F G + L + ++
Sbjct: 123 EGKKVCSFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCES 165
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
Length = 243
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 63/238 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITIL---- 79
G TTV + D ++A+D R S G + +++ K+ + + PT + +++
Sbjct: 49 GTTTVGLKTQDGTVLATDMRASLGRMVSSKDVQKVEEIH---PTGALTIAGSVSAAQSLI 105
Query: 80 -----PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
++Y + MS +L+ ++ + FF I+ G+D +G +YS D
Sbjct: 106 SSIRAEVRLYEARRGEDMSMEALSTLLGNFLRSGGFF--IVQPILGGVDDDGP-HIYSID 162
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G + GS +L+ Q DL++
Sbjct: 163 PAGSIIEEEYTVTGSGSQYALGVLEQQY------------------NEDLSI-------- 196
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
E+A +V + +A ERD+ +G+G+++C +T+DG++
Sbjct: 197 ----------------------EEAKTVAARSIESAVERDLASGNGINVCVVTEDGVE 232
>gi|195389042|ref|XP_002053187.1| GJ23747 [Drosophila virilis]
gi|194151273|gb|EDW66707.1| GJ23747 [Drosophila virilis]
Length = 208
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
NGG +A+ G D IA+D R + + K+F H R + T + +
Sbjct: 10 NGGCVIAMQGKDCIGIATDRRFGLQSHTAGEDCQKVF-HLSPRLYLGLTGLQTDIMTVYN 68
Query: 83 MYLHEHN-------KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L+ N + +S L +++S ++Y RF P++ +IAGLDPE
Sbjct: 69 RLLYRKNVYEINEGREVSPKVLTELLSHLLYEHRFGPFFVEPVIAGLDPE 118
>gi|452824977|gb|EME31976.1| proteasome beta subunit [Galdieria sulphuraria]
Length = 206
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTI 76
NGG +A+AG + IA+D R + +++F D T + ++
Sbjct: 9 NGGCVLAMAGDNCVAIAADRRFGVQQTTIGTDTTRIFKINDRLMLGLTGLRTDVTTLYNR 68
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ +Y + + S A M++ +Y +RF PY+ ++AGL +G+ + + D +
Sbjct: 69 FVQRLNLYRLREEREIKPASFANMVASTLYSRRFSPYFVEPVVAGLTEKGEPYLCAQDLL 128
Query: 137 G 137
G
Sbjct: 129 G 129
>gi|353239440|emb|CCA71352.1| probable PUP3-20S proteasome subunit beta3 [Piriformospora indica
DSM 11827]
Length = 205
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 31/134 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---------------DHYYYRPT 67
NGG+ VA+AG D IASD RL K+F D R
Sbjct: 7 NGGSVVAMAGKDCVAIASDLRLGNQALTIATNFEKVFPVTERIMLGMAGLATDVLTLRDR 66
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ F + MY + + + + A ++S +Y +RF PY+ +IAGL GK
Sbjct: 67 FRFRV---------NMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVIAGL---GK 114
Query: 128 GC----VYSYDPIG 137
G + S D IG
Sbjct: 115 GTNKPFIASTDVIG 128
>gi|366989209|ref|XP_003674372.1| hypothetical protein NCAS_0A14350 [Naumovozyma castellii CBS 4309]
gi|342300235|emb|CCC67993.1| hypothetical protein NCAS_0A14350 [Naumovozyma castellii CBS 4309]
Length = 205
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI 78
P S NGG VA+ G D IA D RL + + K+F HY + + +T
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNNFEKIF-HYGHVFLGLTGLATDVTT 62
Query: 79 LP------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVY 131
L +Y + ++ + + +++S +Y KRF PY+ ++AG++ + K +
Sbjct: 63 LSETFRYKTNLYKLKEDRPIEPDTFIQLVSTTLYEKRFGPYFVGPVVAGINSQTEKPFIA 122
Query: 132 SYDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES 152
>gi|164660346|ref|XP_001731296.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
gi|159105196|gb|EDP44082.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
Length = 201
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 24/130 (18%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYY------------YRPT 67
NGG+ +A+ G + IASD RL + + + K+F D Y R
Sbjct: 4 NGGSVIAMTGKNCVAIASDLRLGNQALLLSTQFDKVFRMTDRTYVGLPGLATDVATLREK 63
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ + + MY + ++ + + AK++S +Y +RF PY+ ++AG++ +
Sbjct: 64 FRYRL---------NMYRMKEDRDIEPETFAKLMSSTLYERRFGPYFIEPVVAGMNSNNE 114
Query: 128 GCVYSYDPIG 137
+ + D IG
Sbjct: 115 PFIAASDLIG 124
>gi|340520586|gb|EGR50822.1| 20S proteasome, beta subunit [Trichoderma reesei QM6a]
Length = 191
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 72/182 (39%), Gaps = 50/182 (27%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTE 140
MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ G + +D IG +
Sbjct: 58 NMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGAPFICGFDSIGCID 117
Query: 141 RA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTI 199
A +F G+ +S+Q+ + G+ DL E +AL
Sbjct: 118 FAKDFIVSGT------------------ASEQLFGMCEGLWEPDL----EPDAL------ 149
Query: 200 LLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLR 259
+ A A +RD +G G H+ I KD + + R
Sbjct: 150 --------------------FETISQALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGR 189
Query: 260 KD 261
+D
Sbjct: 190 QD 191
>gi|388583046|gb|EIM23349.1| N-terminal nucleophile aminohydrolase [Wallemia sebi CBS 633.66]
Length = 205
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 25/131 (19%)
Query: 23 NGGTTVAVAGPDYAIIASDTRL-------SAGYNIYTREQSKLF--------DHYYYRPT 67
NGG+ VA+ G IA D RL +A + KLF D R T
Sbjct: 7 NGGSVVAMRGKKCVAIAGDLRLGNRNMSLAANFEKVFPITQKLFVGLPGLASDVLTLRDT 66
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EG 126
+ F MY + + + + A ++S +Y +R+ PY+ ++AGLDP G
Sbjct: 67 FRFRT---------NMYKLKEGREIEPNTFAHLVSSTLYERRWSPYFVEPVVAGLDPNNG 117
Query: 127 KGCVYSYDPIG 137
+ + + D IG
Sbjct: 118 EPFIAATDLIG 128
>gi|46108708|ref|XP_381412.1| hypothetical protein FG01236.1 [Gibberella zeae PH-1]
gi|408398859|gb|EKJ77985.1| hypothetical protein FPSE_01773 [Fusarium pseudograminearum CS3096]
Length = 191
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 55/239 (23%)
Query: 30 VAGPDYAIIASDTRLSAGYNIYTREQSKLFDH--YYYRPTYNFLMIFTITIL---PFQMY 84
+ G D IA D RL + + K+F + + T + T++ L MY
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNDFPKIFQYGDVFLGLTGLATDVNTVSDLFRYKVNMY 60
Query: 85 LHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTERA- 142
+ ++ + A ++S +Y +RF PY+ S ++AGLDP+ GK + +D IG + A
Sbjct: 61 RLREERDIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFAK 120
Query: 143 NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLG 202
+F G+ +S+Q+ + G+ DL E +AL
Sbjct: 121 DFIVSGT------------------ASEQLFGMCEGLWEPDL----EPDAL--------- 149
Query: 203 FRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
+ + A +RD +G G H+ I KD + + R+D
Sbjct: 150 -----------------FETISQSLLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 191
>gi|148679117|gb|EDL11064.1| mCG13639 [Mus musculus]
Length = 205
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMI 73
S S NGG +A+ + IA+D R + T + K+F D Y + +
Sbjct: 1 MSIMSYNGGAVMAMKEKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYVGLAGLAIDV 60
Query: 74 FTITI-LPFQMYLHEHNK--VMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGC 129
T+ L F + L+E + + +L M++ ++Y K F PYYT +IAGLDP+ K
Sbjct: 61 QTVAQRLKFLLNLYELKEGWQIKPYTLMSMVANLLYEKWFGPYYTEPVIAGLDPKTFKPF 120
Query: 130 VYSYDPIG 137
+ S D IG
Sbjct: 121 ICSLDLIG 128
>gi|388852079|emb|CCF54255.1| probable PUP3-20S proteasome subunit beta3 [Ustilago hordei]
Length = 204
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL--MIFTITILP 80
NGG+ VA G + +IASD RL K+F TY L + +T L
Sbjct: 7 NGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVF--RVTEKTYIGLPGLASDVTTLR 64
Query: 81 ------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
MY + + + A+++S +Y +RF PY+ +IAG++ + + + + D
Sbjct: 65 EKFRYRVNMYKMKEERDIEPEVFAQLVSSTLYERRFGPYFIEPVIAGINSKNEPFIAASD 124
Query: 135 PIGHTERA-NFRAGGSSG 151
+G A +F G++G
Sbjct: 125 VVGCLNFAKDFVVSGTAG 142
>gi|164427141|ref|XP_964481.2| proteasome component PUP3 [Neurospora crassa OR74A]
gi|157071624|gb|EAA35245.2| proteasome component PUP3 [Neurospora crassa OR74A]
Length = 191
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTE 140
MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ G+ + +D IG +
Sbjct: 58 NMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGEPFICGFDSIGCID 117
Query: 141 RA-NFRAGGSSGALLQALLDN 160
A +F G++ L + +N
Sbjct: 118 FAKDFIVSGTATEQLFGMCEN 138
>gi|337285369|ref|YP_004624843.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334901303|gb|AEH25571.1| proteasome, subunit beta [Pyrococcus yayanosii CH1]
Length = 197
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 95/240 (39%), Gaps = 57/240 (23%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYR---PTYNFLMIFTIT 77
G TTV + + ++A+DT+ S + + T K+ D + M+ I
Sbjct: 6 GTTTVGIRVDEGVVLAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMLARIL 65
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
+ + Y + MST ++A ++S ++ ++FPY +I G E + + DP+G
Sbjct: 66 EVEARYYQFTWGRPMSTRAMANLLSNILNENKWFPYLVQIVIGGYVEE--PVIANLDPLG 123
Query: 138 HTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKL 197
++ A GS A+L++
Sbjct: 124 GLIFDDYTATGSGSPFAIAVLED------------------------------------- 146
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD-GVHLCAITKDGIKEYNF 256
G+R +++ E A+ VK A +RD+YTG V + ITK+G++EY F
Sbjct: 147 ----GYRKDMGIEEAK---ELAVKAVK----VAGKRDVYTGSRKVQVVTITKEGMREYWF 195
>gi|355571914|ref|ZP_09043122.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
gi|354825010|gb|EHF09245.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
Length = 213
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 96/238 (40%), Gaps = 56/238 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD------HYYYRPTYNFLMIFTI 76
G TTV + D ++AS+ R + GY I +++ K++ + I +
Sbjct: 10 TGTTTVGLVLRDAVVLASEMRATMGYLIASKKAKKIYQIADRIGMTTAGGVGDAQQIARL 69
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ +Y + ++ ++A ++S ++ R++P+Y ++ G+D EG +Y+ D +
Sbjct: 70 MTVECSLYQIRRGRPITIGAVATLLSNILNANRYYPFYVQLLVGGVD-EGGPKLYAVDAL 128
Query: 137 GHTER-ANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSS 195
G R A GS + +L+++ SK +
Sbjct: 129 GGASREEEMVATGSGSPMAFGVLEDRY------SKDLSE--------------------- 161
Query: 196 KLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
++A+++ A +A +RD +G+G+H+ ITK+ +E
Sbjct: 162 ---------------------DEAVALAVRAIRSAMKRDAGSGEGIHVVVITKEAYRE 198
>gi|303287020|ref|XP_003062799.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455435|gb|EEH52738.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 206
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTR-EQSKLFD---HYYYRPTYNFLMIFTI 76
S NG +A+ G + IASD R T + K+++ H Y + ++
Sbjct: 5 SYNGAAIIAMCGKNCVAIASDLRFGINQQQTTAVDMKKIYEIHPHLYVGLSGASESHWS- 63
Query: 77 TILPFQMYLHEHN-------KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
P+ + HN + M + A ++S M+Y KRF PYY ++AGLDP
Sbjct: 64 ---PYDRFAFRHNLYKLREGRDMRPETFANVVSAMLYEKRFGPYYAEPVVAGLDP 115
>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
furiosus DSM 3638]
gi|397652128|ref|YP_006492709.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|74552258|sp|Q8U4C9.1|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|393189719|gb|AFN04417.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 196
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 69/243 (28%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTI-TILPFQ 82
G TTV + D ++A+DT+ S + + T K+ P + + I T ++ Q
Sbjct: 6 GTTTVGIKVKDGVVLAADTQASLDHMVETLNIKKII------PITDRIAITTAGSVGDVQ 59
Query: 83 M-----------YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
M Y + M+T ++A ++S ++ R+FPY II G E +
Sbjct: 60 MLARYLEAEARYYYFTWGRPMTTKAMANLLSNILNENRWFPYLVQIIIGGYVDE--PTIA 117
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
+ DP G ++ A GS A+L+
Sbjct: 118 NLDPFGGLIFDDYTATGSGTPFAIAVLEE------------------------------- 146
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGD-GVHLCAITKDG 250
G+R + +E+A + A AA RD+YTG V + ITKDG
Sbjct: 147 ----------GYRED-------LTIEEAKELAIRAVRAAGRRDVYTGSKKVQVVTITKDG 189
Query: 251 IKE 253
+KE
Sbjct: 190 MKE 192
>gi|226478588|emb|CAX72789.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
gi|226478710|emb|CAX72850.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
gi|257206170|emb|CAX82736.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
Length = 205
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
NG + ++G D A IA D R + + +K++ R F + T FQ
Sbjct: 7 NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVY-SLGPRLYVGFPGLATDNQTVFQ 65
Query: 83 -------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSYD 134
MY N+ + ++ M+S ++Y +RF PY+ ++AG+D K V D
Sbjct: 66 RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125
Query: 135 PIGHTERAN 143
IG AN
Sbjct: 126 LIGCVCEAN 134
>gi|399218578|emb|CCF75465.1| unnamed protein product [Babesia microti strain RI]
Length = 192
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGH-TE 140
+++ E + + SL +++ M+Y +RF P++ S I+AGLD + + + SYD IG ++
Sbjct: 60 KIFELEQERDIGIQSLGHVVANMLYSRRFGPWFISPIVAGLDDKNRPFISSYDLIGAPSD 119
Query: 141 RANFRAGGSSGALLQALLDN 160
+F GS L + ++
Sbjct: 120 SDDFVVSGSCSDQLFGICES 139
>gi|302411392|ref|XP_003003529.1| proteasome component PUP3 [Verticillium albo-atrum VaMs.102]
gi|261357434|gb|EEY19862.1| proteasome component PUP3 [Verticillium albo-atrum VaMs.102]
Length = 191
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTE 140
MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ GK + +D IG +
Sbjct: 58 NMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCID 117
Query: 141 RA-NFRAGGSSGALLQALLDN 160
A +F G++ L + ++
Sbjct: 118 FAKDFIVSGTASEQLFGMCES 138
>gi|320101460|ref|YP_004177052.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753812|gb|ADV65570.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 208
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 60/249 (24%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIY---TREQSKLFDHYYYRPTYNFLMIFTIT 77
+++ TTV + DY ++A+D R +AG +Y ++ S++ D Y T + L+
Sbjct: 4 AESKTTTVGLVVGDYVVLAADKRATAGPMVYHKAVKKISRITD--YAALTISGLVADAQY 61
Query: 78 ILPFQMYL-----HEHNKVMSTTSLAKMISIMM-YGKRFFPYYTSTIIAGLDPEGKGCVY 131
I+ + +L E K +S +LA IS+++ R+ P+ ++ G D G +Y
Sbjct: 62 IVEYARFLARDYEAETGKPISVGALASRISLVLSVYLRYVPFIVQLLLGGRDHTG-ASLY 120
Query: 132 SYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREIN 191
D G R + A GS + +L+
Sbjct: 121 YMDLYGSVTREKYMATGSGSPVAFGVLEQ------------------------------- 149
Query: 192 ALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
G+R+ + LE+A ++ A ++A RD +TG+GV + I G
Sbjct: 150 ----------GYRSD-------LSLEEAKALAFKAVSSAIMRDGFTGEGVDVVVIGPQGY 192
Query: 252 KEYNFPLRK 260
E PL++
Sbjct: 193 MEETIPLKR 201
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL---------MI 73
G TTV + ++AS+ R + GY I + K+ Y P +
Sbjct: 9 KGTTTVGIVFETGVVLASEKRATMGYLISNKTAKKI---YQIAPRIGLTTAGGVGDAQQL 65
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
+ + +Y K +S + + ++S +++G R FP+Y +I G+D G ++S
Sbjct: 66 ARLMTVEANLYEIRRGKRISVQAASTLLSNILHGNRMFPFYVQLLIGGVDETGP-VLFSV 124
Query: 134 DPIGHTERAN-FRAGGSSGALLQALLDNQ--VGIIQHSSKQM 172
D +G T + + A GS + +L+++ +G+ + S+ ++
Sbjct: 125 DAVGGTGKEDGIVATGSGSPMAYGVLEDRYTLGMDERSAIEL 166
>gi|397575659|gb|EJK49816.1| hypothetical protein THAOC_31273 [Thalassiosira oceanica]
Length = 362
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 120/292 (41%), Gaps = 61/292 (20%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQSKLFD-HYYYRPTYNFLMIFT- 75
P NGG+ +A+AG + IA DTR G+ +++ S + + P N LM +T
Sbjct: 83 PTKFNGGSVLAMAGSNSVAIAVDTRFGLGFQTVHSLGDSDEGNPRIIHLPNSNTLMAWTG 142
Query: 76 -----------ITILPFQMYLHEH--------NKVMSTTSLAKMISIMMYGKRFFPYYTS 116
+ ++ + + +E ++ S+A ++S ++Y +R PYY
Sbjct: 143 LYGDGLSFSEELNMIMGRQFRNEQILSFPNTKRRITGPKSIAMLMSHLLYQRRNAPYYVE 202
Query: 117 TIIAGLDPEGKGCVYSYDPIGHTERANFRAG----GSSGALLQALLD-NQVGIIQH---- 167
++ GL+ PI R + AG S + LQ+++D + G QH
Sbjct: 203 PVVVGLESV---------PIDEV-RIDGAAGELRIEDSSSCLQSIIDIARRG--QHLLTT 250
Query: 168 ----SSKQMKSVLGGIRTHD--LALTREINALSSKLTILLG-------FRNQENVDKTPV 214
+S Q V+ R L T + A S+ + + + E + + +
Sbjct: 251 TEDGASSQPARVINRKRVQRPFLCTTDMLGAQSTSSSFVASGVASRSLYGTAEALWRPDL 310
Query: 215 PLEKAISVVKDAFTAAAERDIYTGDGV--HLCAITKDG---IKEYNFPLRKD 261
E+ + V AF +A ERD +G GV +L T DG I EY R D
Sbjct: 311 SGEELVEVCGRAFLSALERDCLSGYGVVIYLIEGTGDGDARIVEYVLDCRND 362
>gi|410672077|ref|YP_006924448.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
gi|409171205|gb|AFV25080.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
Length = 210
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTI 76
G TTV + D ++A++ R + G+ I ++ K++ D + T + I I
Sbjct: 8 KGTTTVGIVCSDGVVMATEQRATMGHLIASKTAKKIYQIDDFAAMTTAGSVGDAQQIVRI 67
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+ ++Y + M+ L M+S ++ G+R++P ++ G D G +YS D +
Sbjct: 68 ISVESKLYKMRRKESMTIKGLTTMLSNLLSGQRYYPLMVQLLVGGYDKHGPE-LYSIDAL 126
Query: 137 -GHTERANFRAGGSSGALLQALLDNQ 161
G+ + A GS + +L+++
Sbjct: 127 GGNIDEKRVVATGSGSPIAYGVLEDR 152
>gi|387593397|gb|EIJ88421.1| hypothetical protein NEQG_01111 [Nematocida parisii ERTm3]
gi|387597054|gb|EIJ94674.1| hypothetical protein NEPG_00197 [Nematocida parisii ERTm1]
Length = 204
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ- 82
GG+++A+ G D +I +D R + ++L Y+ T ++ T + Q
Sbjct: 8 GGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRL-----YKMTDRLILSLTGFVPDCQI 62
Query: 83 ----------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYS 132
M+ + + A ++S ++Y KRF P+ S +I G D E VY+
Sbjct: 63 LYKTLRKHVNMFKLNEQREIEPKEFACLLSYILYSKRFSPFLISPLIVGFDRENNPHVYT 122
Query: 133 YDPIG-HTERANFRAGGSSGALLQALLD 159
D IG + +F + G++ L + D
Sbjct: 123 MDLIGCMSAHKDFASTGTASTNLTGIAD 150
>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
Length = 243
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 89/237 (37%), Gaps = 63/237 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI----- 78
G TTV + D ++A+D R S GY + +++ K+ + + PT + +++
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIH---PTGALTIAGSVSAAQSLI 105
Query: 79 ----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
++Y + MS +L+ ++ + F Y I+ G+D G +YS D
Sbjct: 106 SSLRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSID 162
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G L E
Sbjct: 163 PAGSI----------------------------------------------LEEEYTVTG 176
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
S LG QE D + +++A V A +A ERD+ +G+G+++ +T+DG+
Sbjct: 177 SGSQYALGVLEQEFEDG--LSIDEAKQVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|378754521|gb|EHY64552.1| hypothetical protein NERG_02362 [Nematocida sp. 1 ERTm2]
Length = 204
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 17/148 (11%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ- 82
GG+++A+ G D +I +D R + ++L Y+ T ++ T + Q
Sbjct: 8 GGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRL-----YKITDRIILSLTGFVPDCQV 62
Query: 83 ----------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYS 132
M+ + + + ++S ++Y KRF P+ S +IAG D E VY+
Sbjct: 63 LYKTLRKHVTMFKLSQQREIEPKEFSSLLSYILYSKRFSPFLISPLIAGFDRENNPHVYT 122
Query: 133 YDPIGHTE-RANFRAGGSSGALLQALLD 159
D IG +F G++ L + D
Sbjct: 123 MDLIGCVSGHDDFATTGTASKSLSGIAD 150
>gi|339260684|ref|XP_003368284.1| proteasome component C5 [Trichinella spiralis]
gi|316962733|gb|EFV48750.1| proteasome component C5 [Trichinella spiralis]
Length = 126
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 10 ETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSA 46
E + F+PY++NGGT +AG D+ I+ DTRLSA
Sbjct: 78 ENALSDRFNPYTENGGTCAGIAGKDFVNISGDTRLSA 114
>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
Length = 243
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 89/237 (37%), Gaps = 63/237 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI----- 78
G TTV + D ++A+D R S GY + +++ K+ + + PT + +++
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIH---PTGALTIAGSVSAAQSLI 105
Query: 79 ----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
++Y + MS +L+ ++ + F Y I+ G+D G +YS D
Sbjct: 106 SSLRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSID 162
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G L E
Sbjct: 163 PAGSI----------------------------------------------LEEEYTVTG 176
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
S LG QE D + +++A V A +A ERD+ +G+G+++ +T+DG+
Sbjct: 177 SGSQYALGVLEQEFEDG--LSIDEAKQVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|56755285|gb|AAW25822.1| unknown [Schistosoma japonicum]
Length = 190
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
NG + ++G D A IA D R + + +K++ R F + T FQ
Sbjct: 7 NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYS-LGPRLYVGFPGLATDNQTVFQ 65
Query: 83 -------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSYD 134
MY N+ + ++ M+S ++Y +RF PY+ ++AG+D K V D
Sbjct: 66 RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125
Query: 135 PIGHTERAN 143
IG AN
Sbjct: 126 LIGCVCEAN 134
>gi|336477060|ref|YP_004616201.1| proteasome endopeptidase complex subunit beta [Methanosalsum
zhilinae DSM 4017]
gi|335930441|gb|AEH60982.1| proteasome endopeptidase complex, beta subunit [Methanosalsum
zhilinae DSM 4017]
Length = 210
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV + D ++A++ R + G I ++ K++ D T + I +
Sbjct: 9 GTTTVGIVCRDGVVLATEKRATMGNLIASKTAKKIYQIDDLVGLTTAGSVGDAQQIVRLI 68
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI- 136
+ ++Y + M+ + ++S ++ G+R++P +I G+D +G +YS D +
Sbjct: 69 SVESRLYKMRRQETMTIKGITTLLSNLLSGQRYYPLMVQLLIGGVDKKGPN-LYSLDALG 127
Query: 137 GHTERANFRAGGSSGALLQALLDNQ 161
G E N A GS + +L+++
Sbjct: 128 GMIEETNAVATGSGSPIAYGVLEDR 152
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14.1|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 64/236 (27%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYY------YRPTYNFLMIF 74
G TTV + D + AS+ R S G + + K+F DH N + I
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 75 TITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
+ +QM +N +S + A + + ++ R P Y T++ G+D + K +YS D
Sbjct: 68 EAEVSLYQM---RNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMDGD-KPSLYSLD 120
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G + + GS + +L++ R H+ T E
Sbjct: 121 PAGGMIEDTYISTGSGSIVAYGVLED-------------------RYHEEITTDE----- 156
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
LE A+ +K AA+ERD ++G+G + +TKDG
Sbjct: 157 --------------------GLEIAVRAIK----AASERDTFSGNGYLVAKVTKDG 188
>gi|12323391|gb|AAG51672.1|AC010704_16 putative 20S proteasome beta subunit PBC2; 7006-8626 [Arabidopsis
thaliana]
Length = 191
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 30 VAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFLMIFTITILPFQM 83
+ G + IASD RL I T Q SK+ DH + + + ++ + ++
Sbjct: 1 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKL 60
Query: 84 YLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERA- 142
Y + M + A ++S ++Y KRF P+ +IAGL + K + + D IG E A
Sbjct: 61 YQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAK 120
Query: 143 NFRAGGSSGALL 154
+F G++ L
Sbjct: 121 DFVVSGTASESL 132
>gi|448321276|ref|ZP_21510756.1| proteasome endopeptidase complex subunit beta [Natronococcus
amylolyticus DSM 10524]
gi|445604136|gb|ELY58087.1| proteasome endopeptidase complex subunit beta [Natronococcus
amylolyticus DSM 10524]
Length = 223
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 87/228 (38%), Gaps = 62/228 (27%)
Query: 34 DYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT-------ITILPFQMYLH 86
D +IA+D R S G + + + + + PT M+ + I L ++ L+
Sbjct: 38 DGVVIATDMRASLGGRFVSNKNVQKVEQIH--PTAALTMVGSVGGAQSFIKSLRAEVNLN 95
Query: 87 E--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANF 144
E +VMS +LA + G FF + I+ G+D EG VYS DP
Sbjct: 96 EARRGEVMSIDALATLAGNFARGGPFFAIH--PILGGVDEEGS-HVYSIDP--------- 143
Query: 145 RAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFR 204
GG+ D +T S + + G
Sbjct: 144 -------------------------------AGGVMEDDYTVT------GSGMQLAYGHL 166
Query: 205 NQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
Q D + ++A +V +AAERD +G+GV LC IT +G++
Sbjct: 167 EQAYDDD--MSNDEAKTVAARGIKSAAERDTGSGNGVFLCEITDEGVE 212
>gi|384248553|gb|EIE22037.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 205
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTIT 77
S + NG VA+AG + I SD R + + K++ ++ L I
Sbjct: 2 SIFEYNGAAIVAMAGKECVAIGSDLRFGVQFQTLATDYKKVY------KIHDKLFIGLAG 55
Query: 78 I----------LPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL-DP 124
+ L F+ +Y + + ++ +++S M+Y KRF PY+ S +IAGL D
Sbjct: 56 LGTDAQTMHQKLKFRHNLYKLREERNIKPSTFGELVSSMLYEKRFGPYFVSPVIAGLEDK 115
Query: 125 EGKGCVYSYDPIGHTERAN-FRAGGSS 150
+ D IG E AN F G++
Sbjct: 116 TNVPYICGMDTIGAIETANDFMVAGTA 142
>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
Length = 243
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 89/237 (37%), Gaps = 63/237 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI----- 78
G TTV + + ++A+D R S GY + +++ K+ + + PT + +++
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIH---PTGALTIAGSVSAAQSLI 105
Query: 79 ----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
++Y + MS +L+ ++ + F Y I+ G+D G +YS D
Sbjct: 106 SSLRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSID 162
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G L E
Sbjct: 163 PAGSI----------------------------------------------LEEEYTVTG 176
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
S LG QE D + +E+A V A +A ERD+ +G+G+++ +T+DG+
Sbjct: 177 SGSQYALGVLEQEFKDG--LSIEEAKQVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|326329709|ref|ZP_08196030.1| proteasome, beta subunit [Nocardioidaceae bacterium Broad-1]
gi|325952474|gb|EGD44493.1| proteasome, beta subunit [Nocardioidaceae bacterium Broad-1]
Length = 278
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 10/153 (6%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYN 69
P+ + + +G T VA P IIA D R + G I R+ K+F D Y
Sbjct: 35 PVPGNLGDIAPHGTTIVAATFPGGVIIAGDRRATQGNLIAERDMRKVFPADEYSAVGIAG 94
Query: 70 FLMIFTITILPFQMYLHEHNKVMSTT----SLAKMISIMMYGKRFFPYYTSTII---AGL 122
+ + FQ L + K+ TT A +S ++ G ++ G
Sbjct: 95 SAGLAVELVKLFQTELEHYEKIEGTTLSIEGKASRLSALVRGNLAMAMQGLVVVPLFVGF 154
Query: 123 DPE-GKGCVYSYDPIGHTERANFRAGGSSGALL 154
DP+ G G +Y YDP G AG SG+L
Sbjct: 155 DPDAGVGKIYGYDPTGGRYEQTGYAGVGSGSLF 187
>gi|440290998|gb|ELP84297.1| proteasome subunit beta type-3, putative [Entamoeba invadens IP1]
Length = 265
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 6/134 (4%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTI 76
+GG + + G + +A+D R Y + K+F +H + +F
Sbjct: 9 SGGIAIGMCGKNCVALAADNRYGLRYQFASSNFHKVFQLNEHCLVGGCGVYADVQTVFEQ 68
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+Y + + + L + +++ KRF PYY S II G D GK SYD I
Sbjct: 69 IKYDANLYKLREGRPIGPSQLVNATAHLLFSKRFNPYYMSPIIIGFDDNGKTYCSSYDYI 128
Query: 137 GHTERANFRAGGSS 150
G F A G+
Sbjct: 129 GAPGDYRFAAVGTG 142
>gi|29841419|gb|AAP06451.1| similar to NM_011971 proteasome (prosome, macropain) subunit, beta
type 3 in Mus musculus [Schistosoma japonicum]
Length = 209
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
NG + ++G D A IA D R + + +K++ R F + T FQ
Sbjct: 7 NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYS-LGPRLYVGFPGLATDNQTVFQ 65
Query: 83 -------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSYD 134
MY N+ + ++ M+S ++Y +RF PY+ ++AG+D K V D
Sbjct: 66 RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125
Query: 135 PIGHTERAN 143
IG AN
Sbjct: 126 LIGCVCEAN 134
>gi|346320946|gb|EGX90546.1| proteasome component PUP3 [Cordyceps militaris CM01]
gi|400595217|gb|EJP63024.1| proteasome component PUP3 [Beauveria bassiana ARSEF 2860]
Length = 191
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYSYDPIGHTE 140
MY + ++ + A ++S +Y +RF PY+ S ++AGLDP+ GK + +D IG +
Sbjct: 58 NMYRLREERDIAPRTFANLVSSSLYERRFGPYFISPVVAGLDPKTGKPFICGFDSIGCID 117
Query: 141 RA-NFRAGGSS 150
A +F G++
Sbjct: 118 FAKDFIVAGTA 128
>gi|260809319|ref|XP_002599453.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
gi|229284732|gb|EEN55465.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
Length = 205
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDH----YYYRPTYNFLMIFTITI 78
NG +A+ G D IA+D R + + K+F + P +
Sbjct: 7 NGAAIIAMVGKDCVAIAADRRFGVQAQTVSMDFQKIFQMGDRLFLGLPGLATDVQTVSNR 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
+ F++ L+E + + + M+S ++Y +RF PY+ ++AGLDP+
Sbjct: 67 MKFRLNLYELREARQVKPKTFLSMVSNLLYERRFGPYFVEPVVAGLDPK 115
>gi|195444118|ref|XP_002069722.1| GK11424 [Drosophila willistoni]
gi|194165807|gb|EDW80708.1| GK11424 [Drosophila willistoni]
Length = 205
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT--ITI-- 78
NGG VA+ G + IA+D R + + K+F H R + T +T+
Sbjct: 7 NGGCVVAMRGKECVAIATDHRFGVQAQTISTDFKKVF-HIAPRMFLGLTGLQTDILTVRD 65
Query: 79 -LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSYD 134
L F+ L+E N+ M+ + M+S +Y RF PY+ ++AGL P+ + + + D
Sbjct: 66 RLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFVEPVVAGLHPKTLEPFICNMD 125
Query: 135 PIGH-TERANFRAGGSSGALLQALLD 159
IG E +F G+ L + +
Sbjct: 126 LIGCPNEPDDFVVAGTCAEQLYGMCE 151
>gi|296242983|ref|YP_003650470.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095567|gb|ADG91518.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 206
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 95/242 (39%), Gaps = 56/242 (23%)
Query: 26 TTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRP-TYNFLMIFTITILPFQMY 84
TTV + +Y ++A+D R +AG +Y + K+ + Y T + L+ ++ Y
Sbjct: 9 TTVGLVAGEYVVLAADKRATAGPMVYHKRVRKIMEITPYAAMTISGLVADAQFLVENAKY 68
Query: 85 LHEH-----NKVMSTTSLAKMISIMMYG-KRFFPYYTSTIIAGLDPEGKGCVYSYDPIGH 138
+ + K +S +LA IS+++ RF P+ ++ G+D EG +Y D G
Sbjct: 69 IAKDYELKMGKRISIDALASRISLILSAYLRFSPFIVQLLLGGVDHEGP-KLYYMDLYGS 127
Query: 139 TERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLT 198
R F + GS + +L+
Sbjct: 128 VSRERFMSTGSGSPVAFGVLEQ-------------------------------------- 149
Query: 199 ILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPL 258
G+R + LE+A + A ++A RD +TG+GV + I +GI E
Sbjct: 150 ---GYREG-------LTLEEAKELAFKAVSSAIMRDSFTGEGVDIVVIGPEGISEETRLF 199
Query: 259 RK 260
+K
Sbjct: 200 KK 201
>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
Length = 243
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 89/237 (37%), Gaps = 63/237 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI----- 78
G TTV + + ++A+D R S GY + +++ K+ + + PT + +++
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIH---PTGALTIAGSVSAAQSLI 105
Query: 79 ----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
++Y + MS +L+ ++ + F Y I+ G+D G +YS D
Sbjct: 106 SSLRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSID 162
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G L E
Sbjct: 163 PAGSI----------------------------------------------LEEEYTVTG 176
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
S LG QE D + +E+A V A +A ERD+ +G+G+++ +T+DG+
Sbjct: 177 SGSQYALGVLEQEFEDG--LSIEEAKGVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
Length = 243
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 89/237 (37%), Gaps = 63/237 (26%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI----- 78
G TTV + + ++A+D R S GY + +++ K+ + + PT + +++
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIH---PTGALTIAGSVSAAQSLI 105
Query: 79 ----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
++Y + MS +L+ ++ + F Y I+ G+D G +YS D
Sbjct: 106 SSLRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSID 162
Query: 135 PIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALS 194
P G L E
Sbjct: 163 PAGSI----------------------------------------------LEEEYTVTG 176
Query: 195 SKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
S LG QE D + +E+A V A +A ERD+ +G+G+++ +T+DG+
Sbjct: 177 SGSQYALGVLEQEFEDG--LSIEEAKGVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|70606695|ref|YP_255565.1| proteasome beta subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066918|ref|YP_007434000.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449069190|ref|YP_007436271.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
gi|121725055|sp|Q4JAA8.1|PSB2_SULAC RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|68567343|gb|AAY80272.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
639]
gi|449035426|gb|AGE70852.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449037698|gb|AGE73123.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
Length = 203
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 95/247 (38%), Gaps = 64/247 (25%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPF-- 81
G TTV + D ++A+D R SAGY + + K+ Y ++ L F
Sbjct: 10 GTTTVGIKVKDGVVLAADRRASAGYYVAHKYVRKVL---YVTDNIGITTAGSVADLQFIY 66
Query: 82 --QMYLHEHNKV-----MSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
Y++ N + ++ +A ++ ++ ++FPY +I G+D + + +Y+ D
Sbjct: 67 EALKYIYHRNSITGEGPITVKGIATWLANVLSSSKYFPYLVQILIGGVDDQPR--LYNLD 124
Query: 135 PIGHTERANFRAGGS-SGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
+G + A GS S L L DN
Sbjct: 125 YLGDITEEEYTATGSGSPEALGVLEDNY-------------------------------- 152
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
K + L++A + K A ++ +RD +TG GV + ITK+G +E
Sbjct: 153 -----------------KPEMSLDEAAELAKRAIFSSIKRDSFTGTGVIVTKITKNGHEE 195
Query: 254 YNFPLRK 260
+ + K
Sbjct: 196 KEYYITK 202
>gi|261201474|ref|XP_002627137.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239592196|gb|EEQ74777.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239611645|gb|EEQ88632.1| proteasome component Pup3 [Ajellomyces dermatitidis ER-3]
gi|327348342|gb|EGE77199.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 192
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 60/242 (24%)
Query: 30 VAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM-----IFTIT-ILPFQ- 82
+ G D IA D RL + K+F+ Y TY L + T++ +L F+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFN--YAPSTYLGLTGLATDVSTVSDVLRFKV 58
Query: 83 -MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSYDPIGHTE 140
MY + +S +LA + S +Y KRF PY+ S ++AG+D GK + +D IG +
Sbjct: 59 NMYRLREERHISPKTLANLTSSTLYEKRFGPYFVSPVLAGIDNTTGKPFICGFDSIGCID 118
Query: 141 RA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTI 199
A +F G+ +S Q+ G+ DL
Sbjct: 119 FAQDFIVSGT------------------ASDQLFGTCEGLWEPDLG-------------- 146
Query: 200 LLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLR 259
P L + IS A A +RD +G G H+ I KD + + R
Sbjct: 147 -------------PDDLFETIS---QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGR 190
Query: 260 KD 261
+D
Sbjct: 191 QD 192
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 215
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 91/241 (37%), Gaps = 68/241 (28%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI--------- 73
G TTV + D ++A++ R + G I +R K+ YR M
Sbjct: 11 KGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKI-----YRIADRVAMTTAGAVGDAQ 65
Query: 74 FTITILPFQMYLHEHNKVMSTT--SLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
F ++ ++ L+E K T ++A ++S ++ R+FPY+ ++ G+D G +Y
Sbjct: 66 FLARLISVEIKLYEIRKEEKPTVKAIATLLSNILNSVRWFPYFVQLLVGGVDKRGP-SIY 124
Query: 132 SYDPIGHT-ERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREI 190
S D +G E + A GS +L+++
Sbjct: 125 SIDLLGGAIEEIDIVATGSGSPTAYGVLEDRY---------------------------- 156
Query: 191 NALSSKLTILLGFRNQENVDKTP-VPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
TP + ++ + + A +A RD +GDG+ + ITKD
Sbjct: 157 ---------------------TPEITVDDGVELAVRAIYSAMRRDSASGDGIDVVKITKD 195
Query: 250 G 250
G
Sbjct: 196 G 196
>gi|219126883|ref|XP_002183677.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404914|gb|EEC44859.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 204
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF----DHYYYRPTYNFLMIFTITI 78
NG +A+AG D IA+D RL + +K+F Y + I
Sbjct: 7 NGAAMIAMAGKDCVGIAADRRLGVQLQTVATDFNKVFAMGPKSYVGLAGLATDVQTLKNI 66
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
L F+ L+E + MS +L+ ++S ++Y KRF PY+ I+AGL+ + K + + D I
Sbjct: 67 LEFRKNLYELKEEREMSPATLSHLLSTLLYEKRFGPYFVEPIVAGLNEKNKPFLSAMDLI 126
Query: 137 GHTERAN 143
G +A+
Sbjct: 127 GAPVQAD 133
>gi|328770084|gb|EGF80126.1| hypothetical protein BATDEDRAFT_88542 [Batrachochytrium
dendrobatidis JAM81]
Length = 204
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFL--MIFTITILP 80
NG +A+AG + IA+D R + K+F TY L + +T L
Sbjct: 7 NGSAIIAMAGKNCVAIAADRRFGVQALTLGTDFQKIFP--ITDKTYLGLAGLATDVTTLK 64
Query: 81 ------FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
MY E + +S + + M+S Y KRF PY+ I+AGL+ + + S D
Sbjct: 65 DRFRYKVNMYHLEEEREISPKTFSHMVSSTQYEKRFGPYFVEPIVAGLEKDNTPFICSMD 124
Query: 135 PIGHTERA-NFRAGGSSGALLQALLDN 160
IG A +F G++ + + ++
Sbjct: 125 TIGCINFAKDFVVCGTASDQMNGMCES 151
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 89/240 (37%), Gaps = 56/240 (23%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTY------NFLMIFTI 76
G TTV + D + AS+ R + G I + K+F + T + +
Sbjct: 8 KGTTTVGIVCKDGIVFASEKRATLGNLIAHKAVDKIFKIDEHLATTVAGSVGDAQKLVEY 67
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
++Y K + + A + S +++ R FP+ +I G+D G +YS DP
Sbjct: 68 LKAEVRLYKLRTGKPATVRAAASIASNILHASRMFPFIVQMLIGGIDETGPK-IYSVDPA 126
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G + + GS + +L+++
Sbjct: 127 GGKIEDKYVSTGSGSPIAYGVLEDRY---------------------------------- 152
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT-KDGIKEYN 255
K + +E AI++ A ++ +RD ++GDG+ L +T K+G K ++
Sbjct: 153 --------------KKDMSVEDAINIALRAIKSSTKRDTFSGDGISLAVVTEKEGFKRFD 198
>gi|160331191|ref|XP_001712303.1| prsB3 [Hemiselmis andersenii]
gi|159765750|gb|ABW97978.1| prsB3 [Hemiselmis andersenii]
Length = 201
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQS-----KLFDHYYYRPTYNFLMIFTI- 76
NGG+ + + G + IASD R G + +T+ Q K+ + + F I TI
Sbjct: 4 NGGSIIIMGGKNCFAIASDLRF--GLDNFTKGQKTPKIFKIHEKLFLGMIGLFGDISTIR 61
Query: 77 TILPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
IL ++ +YL + ++ + + ++S ++Y RF P+ T++AGLD + + + S D
Sbjct: 62 QILEYKTSIYLLKKSERIQPLGFSNILSNLLYHHRFAPFLVETVLAGLDEKNRLFIESKD 121
Query: 135 PIG-HTERANFRAGGSSGALLQAL 157
+G + ++F GS L +
Sbjct: 122 ILGAKSATSDFATIGSCSESLNGI 145
>gi|401881470|gb|EJT45770.1| proteasome subunit beta type 3 [Trichosporon asahii var. asahii CBS
2479]
Length = 207
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT-- 77
NGG+ VA+ G D IA D RL K+F D Y+ +FT+
Sbjct: 4 NGGSVVAMVGKDCVAIAGDLRLGQQATGVAMNFEKVFPVNDTLYFGLPGLATDVFTLKEQ 63
Query: 78 -ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
MY + + ++ + ++S +Y KRF PY+ ++AG+ P
Sbjct: 64 MRFRVNMYRMKEEREITPVTFTNLLSSTLYEKRFGPYFIEPVVAGIAP 111
>gi|254578212|ref|XP_002495092.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
gi|238937982|emb|CAR26159.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
Length = 205
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI 78
P + NGG VA+ G D IA D RL + K+F + + L T+
Sbjct: 4 PSTINGGVCVAMTGKDCVAIACDLRLGMQSLGVSNNFEKIFKYGHVFLGLTGLATDVTTL 63
Query: 79 -----LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
+Y + ++ + + +++S +Y +RF P++ I+AG++ + GK +
Sbjct: 64 SETFRYKTNLYNLKEDRPIEPETFTQLVSSSLYERRFGPFFVGPIVAGINSKTGKPFIAG 123
Query: 133 YDPIGHTERA-NFRAGGSSGALLQALLDN 160
+D IG + A +F G++ L + ++
Sbjct: 124 FDMIGCIDEAKDFIVSGTASDQLFGMCES 152
>gi|448456459|ref|ZP_21595228.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
gi|445811935|gb|EMA61932.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
Length = 243
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 93/235 (39%), Gaps = 59/235 (25%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT-----ITI 78
G TTV + D ++A+D R S G + +++ K+ + + R + I+
Sbjct: 49 GTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKV-EEVHPRGALTIAGSVSAAQNLIST 107
Query: 79 LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
L + L+E K MS +L+ + ++ F Y I+ G+D EG +YS D +
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDAL 164
Query: 137 GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSK 196
G T + GS Q++
Sbjct: 165 GGTTEEEYTVTGSGS--------------QYA---------------------------- 182
Query: 197 LTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
LG QE D+ V +++A + A +A ERD+ +G+G+++ +T DG+
Sbjct: 183 ----LGVLEQEYHDE--VTVDEATEIAAKAIQSAVERDLASGNGINVAVVTDDGV 231
>gi|406701627|gb|EKD04743.1| proteasome subunit beta type 3 [Trichosporon asahii var. asahii CBS
8904]
Length = 210
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTI--- 76
NGG+ VA+ G D IA D RL K+F D Y+ +FT+
Sbjct: 7 NGGSVVAMVGKDCVAIAGDLRLGQQATGVAMNFEKVFPVNDTLYFGLPGLATDVFTLKEQ 66
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
MY + + ++ + ++S +Y KRF PY+ ++AG+ P
Sbjct: 67 MRFRVNMYRMKEEREITPVTFTNLLSSTLYEKRFGPYFIEPVVAGIAP 114
>gi|324524031|gb|ADY48349.1| Proteasome subunit beta type-3 [Ascaris suum]
Length = 205
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIY---TREQSKLFDHYY--YRPTYNFL 71
S S NGGT +A+AG + IA+D RL ++ KL D Y Y+
Sbjct: 1 MSIMSYNGGTILAMAGNECVCIATDLRLGEQMTTIATNVKKVHKLGDRVYIGLGGFYSDA 60
Query: 72 MIFTITILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKG 128
IL F+ L+E N+ + A MIS ++Y RF Y T ++AGLDP K
Sbjct: 61 KTVLDKIL-FRKNLYELRENRKIKPEVAATMISNLLYQHRFGGYLTEPLVAGLDPVTNKA 119
Query: 129 CVYSYDPIG 137
+ D IG
Sbjct: 120 YICGMDTIG 128
>gi|91772427|ref|YP_565119.1| proteasome endopeptidase complex [Methanococcoides burtonii DSM
6242]
gi|121689381|sp|Q12YV7.1|PSB_METBU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|91711442|gb|ABE51369.1| Proteasome subunit beta precursor [Methanococcoides burtonii DSM
6242]
Length = 210
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPT-------YNFLMIF 74
G TTV + D ++A++ R + G+ I ++ K++ D T + I
Sbjct: 9 GTTTVGIVCTDGVVLATEQRATMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIVRII 68
Query: 75 TITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
++ F+M E + T+L +S M+ G+R++P +I G+D G +YS D
Sbjct: 69 SVESKLFKMRRQESITIKGITTL---LSNMLSGQRYYPLMVQLLIGGVDKNGP-AIYSLD 124
Query: 135 PI-GHTERANFRAGGSSGALLQALLDNQ 161
+ G+ E + GS + +L+++
Sbjct: 125 ALGGNIEETRAVSTGSGSPMAYGVLEDR 152
>gi|405117743|gb|AFR92518.1| proteasome subunit beta type 3 [Cryptococcus neoformans var. grubii
H99]
Length = 210
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 31/151 (20%)
Query: 23 NGGTTVAVAGPDYAIIASDTRL-------SAGYNIYTREQSKLF--------DHYYYRPT 67
NGG+ VA+ G D IASD RL +A ++ KL+ D Y R
Sbjct: 7 NGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPVNDKLYCGLPGLATDVYTLREH 66
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG------ 121
F + MY + + ++ + ++S +Y KRF P++ ++AG
Sbjct: 67 LRFRV---------NMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTS 117
Query: 122 LDPEGKGCVYSYDPIGH-TERANFRAGGSSG 151
L+P K + + D IG T +F G++
Sbjct: 118 LEPHPKPYISTMDTIGCITTPKDFAVAGTAA 148
>gi|303388305|ref|XP_003072387.1| 20S proteasome subunit [Encephalitozoon intestinalis ATCC 50506]
gi|303301527|gb|ADM11027.1| 20S proteasome subunit [Encephalitozoon intestinalis ATCC 50506]
Length = 206
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIF---TITILP 80
GG+ +A+A + I +D RL +++ +++ H Y L +F T +L
Sbjct: 10 GGSILAIASDEAVAIMNDKRLGMSSITVSKDFTRI--HKIGPRLYVGLPVFVPDTQVLLR 67
Query: 81 -----FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDP 135
+ ++ E + M L MIS ++Y KR PY TS I+AGL +GK + D
Sbjct: 68 SIRKNYNLFKLEEQREMEPEELTSMISFLLYSKREAPYITSPIVAGLRSDGKPYISGMDS 127
Query: 136 IGH-TERANFRAGGSSGALLQALLD 159
IG T +F A G+S L + +
Sbjct: 128 IGSITSPRDFVAAGTSEENLMGICE 152
>gi|225680862|gb|EEH19146.1| proteasome subunit beta type-3 [Paracoccidioides brasiliensis Pb03]
gi|226292563|gb|EEH47983.1| proteasome component PUP3 [Paracoccidioides brasiliensis Pb18]
Length = 192
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 96/242 (39%), Gaps = 60/242 (24%)
Query: 30 VAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLM-----IFTIT-ILPFQ- 82
+ G D IA D RL + K+F+ Y TY L + T++ +L F+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFN--YAPSTYLGLTGLATDVSTVSDVLRFKV 58
Query: 83 -MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL-DPEGKGCVYSYDPIGHTE 140
MY + +S +LA ++S +Y KRF PY+ S ++AG+ + G+ + +D IG +
Sbjct: 59 NMYRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEPFICGFDSIGCID 118
Query: 141 RA-NFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTI 199
A +F G+ +S+Q+ G+ DL
Sbjct: 119 FAKDFIVSGT------------------ASEQLFGTCEGLWEPDLG-------------- 146
Query: 200 LLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLR 259
P L + IS A A +RD +G G H+ I KD + + R
Sbjct: 147 -------------PEDLFETIS---QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGR 190
Query: 260 KD 261
+D
Sbjct: 191 QD 192
>gi|56755093|gb|AAW25726.1| SJCHGC01130 protein [Schistosoma japonicum]
Length = 184
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITILPFQ 82
NG + ++G D A IA D R + + +K++ R F + T FQ
Sbjct: 7 NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYS-LGPRLYVGFPGLATDNQTVFQ 65
Query: 83 -------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD-PEGKGCVYSYD 134
MY N+ + ++ M+S ++Y +RF PY+ ++AG+D K V D
Sbjct: 66 RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125
Query: 135 PIGHTERAN 143
IG AN
Sbjct: 126 LIGCVCEAN 134
>gi|300120261|emb|CBK19815.2| unnamed protein product [Blastocystis hominis]
Length = 205
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 12/124 (9%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYY------YRPTYNFLMI 73
NG +A+ G + IASD RL A + K++ D + F +
Sbjct: 8 NGAAVIAMKGKNCVAIASDLRLGAQFQTVDCNFQKIYKMTDQIFIGFNGLQSDAQTFAQL 67
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
T + +++ N+ +S + ++ Y R+ PY+ +IAGLD G+ V +
Sbjct: 68 LTYEVNSYKL---RENRDISPEAFGSLVRTKQYQHRWGPYFVEPVIAGLDKNGEPYVNAM 124
Query: 134 DPIG 137
D IG
Sbjct: 125 DTIG 128
>gi|385805286|ref|YP_005841684.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
gi|383795149|gb|AFH42232.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
Length = 199
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---------DHYYYRPTYNFLMI 73
G T V + + A+IA + R++ I + + K++ T N + I
Sbjct: 6 QGATVVGLKFSNGAVIAGEERMTYRTFIMSSQAKKVYLINERLGAGTAGLMGDTQNIIRI 65
Query: 74 FTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSY 133
F I + Y E MST S AK++S ++Y R FP Y I+AG+D + K +
Sbjct: 66 FREEI---RYYETEIKSKMSTKSAAKLLSNILYSYRGFPLYGEFILAGIDDK-KPTLVVL 121
Query: 134 DPIGHTERANFRAGGSSGALLQALLDN 160
DP G + A G+ G + +L+
Sbjct: 122 DPAGSVLEDEYMAIGTGGPVAIGVLEE 148
>gi|289582997|ref|YP_003481463.1| proteasome endopeptidase complex subunit beta [Natrialba magadii
ATCC 43099]
gi|448283541|ref|ZP_21474815.1| proteasome endopeptidase complex subunit beta [Natrialba magadii
ATCC 43099]
gi|302595777|sp|D3SSQ6.1|PSB_NATMM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|289532550|gb|ADD06901.1| proteasome endopeptidase complex, beta subunit [Natrialba magadii
ATCC 43099]
gi|445573860|gb|ELY28374.1| proteasome endopeptidase complex subunit beta [Natrialba magadii
ATCC 43099]
Length = 243
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 87/227 (38%), Gaps = 62/227 (27%)
Query: 34 DYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT-------ITILPFQMYLH 86
D +IA+D R S G + + + + + PT M+ + I L ++ L+
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIH--PTGALTMVGSVGGAQSFIGSLRAEVNLY 115
Query: 87 E--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTERANF 144
E + +S +LA + G FF + I+ G+D EG VYS DP G ++
Sbjct: 116 EARRGEPISMDALATLAGNFARGGPFFAIHP--ILGGVDEEGS-HVYSIDPAGGVMEDDY 172
Query: 145 RAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINALSSKLTILLGFR 204
GS L LL+ +
Sbjct: 173 TVTGSGMQLAYGLLEQEF------------------------------------------ 190
Query: 205 NQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGI 251
+E++ ++A +V A +AAERD +G+GV LC IT +G+
Sbjct: 191 -EEDLSN-----DEATTVAARAIKSAAERDTGSGNGVFLCEITDEGV 231
>gi|409043787|gb|EKM53269.1| hypothetical protein PHACADRAFT_259498 [Phanerochaete carnosa
HHB-10118-sp]
Length = 208
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMI------FTI 76
NGG+ +A+ G D IASD RL T + K+F P + L + +
Sbjct: 7 NGGSVIAMVGKDCVAIASDLRLGVQSLSITSDFEKIF------PVTDRLFVGLPGLATDV 60
Query: 77 TILPFQ------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
T L Q MY + + + + A+++S +Y +RF PY+ ++AG+
Sbjct: 61 TTLREQFRYRVNMYTIKEEREIEPQTFAQLVSSTLYERRFGPYFIEPVMAGM 112
>gi|225712652|gb|ACO12172.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
Length = 205
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTR---------------LSAGYNIYTREQSKLFDHY 62
S ++ NG +A+ G D IASD R L G ++ D
Sbjct: 2 SVFTINGSAVLAMKGNDCVSIASDLRFGINRHTVMTDFPKTLEMGPGLFVGLAGLATDIQ 61
Query: 63 YYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL 122
+ NF M +M+ + M + + M+S ++Y +RF P++ ++I+AG
Sbjct: 62 TVQQKLNFRM---------KMFELREGRKMRPNTFSTMLSHLLYERRFGPFFVNSIVAGY 112
Query: 123 D-PEGKGCVYSYDPIGH-TERANFRAGGSSGALLQALLD 159
D E K + S D IG T +F A G+S L + +
Sbjct: 113 DYVENKPFISSMDLIGAITIPEDFVAAGTSEDSLMGMCE 151
>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 213
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 92/236 (38%), Gaps = 56/236 (23%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD------HYYYRPTYNFLMIF 74
S G TTV + I+A++ R + GY I ++ K++ + +
Sbjct: 8 SMTGTTTVGLVFAGGVILATEKRATMGYMIASKRAKKVYQIADRIGMTIAGGVGDAQQLA 67
Query: 75 TITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
I + +Y ++ ++ + + ++S + R+FPYY ++ G+D G VYS D
Sbjct: 68 RIITVECNLYQIRRSREITVGAASTLLSNYLNQNRYFPYYVQLLVGGIDDHGP-SVYSVD 126
Query: 135 PI-GHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIRTHDLALTREINAL 193
+ G T+ + + GS + +L+++
Sbjct: 127 AMGGATKEEDIVSTGSGSPMAYGVLEDR-------------------------------- 154
Query: 194 SSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
+R N D +A+ + A +A +RD +G+G+H+ ITKD
Sbjct: 155 ---------YRPGMNED-------EAVELAVRALRSAMKRDAGSGEGIHVVVITKD 194
>gi|330318776|gb|AEC11048.1| 20S proteasome beta subunit pbc2 [Camellia sinensis]
Length = 187
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 82 QMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIGHTER 141
++Y + M + A ++S ++Y KRF PY+ +IAGL + K + + D IG E
Sbjct: 55 KLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFICTMDSIGAKEL 114
Query: 142 A-NFRAGGSSGALL 154
A +F G++ L
Sbjct: 115 AKDFVVAGTASESL 128
>gi|443927308|gb|ELU45815.1| 20S proteasome subunit beta 3 [Rhizoctonia solani AG-1 IA]
Length = 415
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYR-PTYNFLMIFTITI 78
NGG+ +A+AG + IASD RL K+F D Y P ++
Sbjct: 7 NGGSVIAMAGKNCVAIASDLRLGNQALTVACNFEKIFPVTDRLYVGLPGLATDVLTLRER 66
Query: 79 LPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGL--DPEGKGCVYSYD 134
L F+ MY + + + + A ++S +Y +RF P++ +IAGL P+ K + + D
Sbjct: 67 LRFRVNMYTMKEEREIQPKAFAHLVSSTLYERRFGPFFIEPVIAGLTPGPDPKPFIAATD 126
Query: 135 PIG 137
IG
Sbjct: 127 LIG 129
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,017,492,635
Number of Sequences: 23463169
Number of extensions: 157309093
Number of successful extensions: 387744
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 515
Number of HSP's that attempted gapping in prelim test: 384992
Number of HSP's gapped (non-prelim): 2417
length of query: 261
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 122
effective length of database: 9,097,814,876
effective search space: 1109933414872
effective search space used: 1109933414872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)