Your job contains 1 sequence.
>psy10322
MALVTKQILETPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD
HYYYRPTYNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA
GLDPEGKGCVYSYDPIGHTERANFRAGGSSGALLQALLDNQVGIIQHSSKQMKSVLGGIR
THDLALTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDG
VHLCAITKDGIKEYNFPLRKD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10322
(261 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q6JLB2 - symbol:PSMB1 "Proteasome subunit beta ... 340 1.8e-50 2
UNIPROTKB|Q9IB83 - symbol:psmb1-B "Proteasome subunit bet... 340 3.7e-50 2
UNIPROTKB|Q9IB84 - symbol:psmb1-A "Proteasome subunit bet... 340 3.7e-50 2
ZFIN|ZDB-GENE-040618-2 - symbol:psmb1 "proteasome (prosom... 342 7.7e-50 2
UNIPROTKB|G5E589 - symbol:PSMB1 "Proteasome subunit beta ... 339 3.3e-49 2
UNIPROTKB|I3LQ51 - symbol:PSMB1 "Proteasome subunit beta ... 335 6.8e-49 2
UNIPROTKB|Q2TBX6 - symbol:PSMB1 "Proteasome subunit beta ... 339 1.8e-48 2
UNIPROTKB|P20618 - symbol:PSMB1 "Proteasome subunit beta ... 338 1.8e-48 2
FB|FBgn0002284 - symbol:Prosbeta6 "Proteasome beta6 subun... 367 3.3e-47 2
SGD|S000000137 - symbol:PRE7 "Beta 6 subunit of the 20S p... 315 1.3e-38 2
TAIR|locus:2101846 - symbol:PBF1 species:3702 "Arabidopsi... 305 9.3e-38 2
ASPGD|ASPL0000030334 - symbol:AN5784 species:162425 "Emer... 289 1.7e-36 2
UNIPROTKB|F5H9Q1 - symbol:CNBF3630 "Proteasome subunit be... 325 5.7e-36 2
UNIPROTKB|Q5KFP2 - symbol:CNF01080 "Proteasome subunit be... 325 5.7e-36 2
POMBASE|SPAC22F8.06 - symbol:pam1 "20S proteasome complex... 282 5.0e-35 2
DICTYBASE|DDB_G0272969 - symbol:psmB1 "proteasome subunit... 278 1.7e-34 2
UNIPROTKB|Q6PDW4 - symbol:Psmb1 "Proteasome subunit beta ... 343 3.3e-31 1
MGI|MGI:104884 - symbol:Psmb1 "proteasome (prosome, macro... 342 4.2e-31 1
RGD|621092 - symbol:Psmb1 "proteasome (prosome, macropain... 342 4.2e-31 1
WB|WBGene00003952 - symbol:pbs-6 species:6239 "Caenorhabd... 241 1.1e-29 2
UNIPROTKB|P34286 - symbol:pbs-6 "Proteasome subunit beta ... 241 1.1e-29 2
UNIPROTKB|F1PF02 - symbol:PSMB1 "Proteasome subunit beta ... 328 1.3e-29 1
ASPGD|ASPL0000010099 - symbol:AN3493 species:162425 "Emer... 264 7.8e-23 1
RGD|61875 - symbol:Psmb3 "proteasome (prosome, macropain)... 142 2.7e-11 2
UNIPROTKB|P40112 - symbol:Psmb3 "Proteasome subunit beta ... 142 2.7e-11 2
MGI|MGI:1347014 - symbol:Psmb3 "proteasome (prosome, macr... 141 3.3e-11 2
UNIPROTKB|P33672 - symbol:PSMB3 "Proteasome subunit beta ... 141 4.2e-11 2
UNIPROTKB|E2QX17 - symbol:PSMB3 "Proteasome subunit beta ... 141 4.2e-11 2
UNIPROTKB|P49720 - symbol:PSMB3 "Proteasome subunit beta ... 141 8.5e-11 2
UNIPROTKB|Q58634 - symbol:psmB "Proteasome subunit beta" ... 111 3.3e-10 2
UNIPROTKB|J3QKR3 - symbol:PSMB3 "Proteasome subunit beta ... 141 1.4e-09 1
ZFIN|ZDB-GENE-040426-2682 - symbol:psmb3 "proteasome (pro... 130 3.2e-09 2
TAIR|locus:2204675 - symbol:PBC2 "20S proteasome beta sub... 126 3.2e-09 2
UNIPROTKB|O73817 - symbol:psmb3 "Proteasome subunit beta ... 129 4.9e-09 2
UNIPROTKB|E1BYW9 - symbol:PSMB3 "Proteasome subunit beta ... 131 5.9e-09 2
WB|WBGene00003949 - symbol:pbs-3 species:6239 "Caenorhabd... 128 1.0e-08 2
UNIPROTKB|Q23237 - symbol:pbs-3 "Proteasome subunit beta ... 128 1.0e-08 2
TAIR|locus:2036972 - symbol:PBC1 "proteasome beta subunit... 121 1.7e-08 2
CGD|CAL0003796 - symbol:PUP3 species:5476 "Candida albica... 125 3.3e-08 2
SGD|S000000896 - symbol:PUP3 "Beta 3 subunit of the 20S p... 121 4.5e-08 2
FB|FBgn0026380 - symbol:Prosbeta3 "Proteasome beta3 subun... 117 1.8e-07 2
UNIPROTKB|J9NTB8 - symbol:PSMB3 "Uncharacterized protein"... 120 6.7e-07 2
RGD|1564425 - symbol:RGD1564425 "similar to Proteasome su... 128 1.4e-06 1
POMBASE|SPCC63.12c - symbol:pup3 "20S proteasome complex ... 121 1.5e-06 2
UNIPROTKB|F1M8Y7 - symbol:F1M8Y7 "Uncharacterized protein... 112 2.9e-06 1
UNIPROTKB|D4GYZ1 - symbol:psmB "Proteasome subunit beta" ... 87 4.0e-06 2
UNIPROTKB|F1LWQ7 - symbol:F1LWQ7 "Uncharacterized protein... 119 1.4e-05 1
>UNIPROTKB|Q6JLB2 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type" species:9031
"Gallus gallus" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 HOVERGEN:HBG000961 MEROPS:T01.986
HOGENOM:HOG000091081 KO:K02732 CTD:5689 OrthoDB:EOG4PG61P
GeneTree:ENSGT00550000075035 OMA:YDPIGHC HSSP:P23724
EMBL:AADN02035631 EMBL:AY376311 IPI:IPI00583929
RefSeq:NP_001007906.1 UniGene:Gga.4653 SMR:Q6JLB2 STRING:Q6JLB2
Ensembl:ENSGALT00000018217 GeneID:421551 KEGG:gga:421551
InParanoid:Q6JLB2 NextBio:20824303 Uniprot:Q6JLB2
Length = 237
Score = 340 (124.7 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 68/158 (43%), Positives = 95/158 (60%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYN 69
P+Q+ FSPY+ NGGT +A+AG D+ I+ASDTRLS GY I++R+ K +
Sbjct: 21 PVQYRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYRLTEQTVIGCSG 80
Query: 70 F----LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
F L + I +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 81 FHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 140
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVG 163
GKG VYS+DP+G +R +F+ DNQ+G
Sbjct: 141 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQIG 178
Score = 202 (76.2 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 35/61 (57%), Positives = 47/61 (77%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N +NV+ P+ LEKA+ +VKD F +AAERD+YTGD + +C +TKDGIKE LRK
Sbjct: 177 IGFKNMQNVEHVPLTLEKALQLVKDVFISAAERDVYTGDALKICVVTKDGIKEETIQLRK 236
Query: 261 D 261
D
Sbjct: 237 D 237
>UNIPROTKB|Q9IB83 [details] [associations]
symbol:psmb1-B "Proteasome subunit beta type-1-B"
species:7957 "Carassius auratus" [GO:0005839 "proteasome core
complex" evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 HOVERGEN:HBG000961 EMBL:AB035497
ProteinModelPortal:Q9IB83 SMR:Q9IB83 MEROPS:T01.986 PRIDE:Q9IB83
Uniprot:Q9IB83
Length = 237
Score = 340 (124.7 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 68/158 (43%), Positives = 100/158 (63%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P++H FSPY+ NGGT +AVAG D+A++ASDTRLS GY+I++R+ K + D +
Sbjct: 21 PVEHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSG 80
Query: 69 NFLMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T+T I+ +MY H +NK M++ ++A M+S ++YG+RFFPYY II GLD E
Sbjct: 81 FHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE 140
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVG 163
G+G VYS+DP+G +R ++ DNQ+G
Sbjct: 141 GRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG 178
Score = 199 (75.1 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N ENV++ P+ EKA+ +VKD F +AAERD+YTGD + +C ITK+GI+E PLRK
Sbjct: 177 IGFKNMENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRK 236
Query: 261 D 261
D
Sbjct: 237 D 237
>UNIPROTKB|Q9IB84 [details] [associations]
symbol:psmb1-A "Proteasome subunit beta type-1-A"
species:7957 "Carassius auratus" [GO:0005839 "proteasome core
complex" evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 EMBL:AB035496 ProteinModelPortal:Q9IB84 SMR:Q9IB84
PRIDE:Q9IB84 HOVERGEN:HBG000961 Uniprot:Q9IB84
Length = 238
Score = 340 (124.7 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 68/158 (43%), Positives = 100/158 (63%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P++H FSPY+ NGGT +AVAG D+A++ASDTRLS GY+I++R+ K + D +
Sbjct: 22 PVEHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSG 81
Query: 69 NFLMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T+T I+ +MY H +NK M++ ++A M+S ++YG+RFFPYY II GLD E
Sbjct: 82 FHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE 141
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVG 163
G+G VYS+DP+G +R ++ DNQ+G
Sbjct: 142 GRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG 179
Score = 199 (75.1 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N ENV++ P+ EKA+ +VKD F +AAERD+YTGD + +C ITK+GI+E PLRK
Sbjct: 178 IGFKNMENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRK 237
Query: 261 D 261
D
Sbjct: 238 D 238
>ZFIN|ZDB-GENE-040618-2 [details] [associations]
symbol:psmb1 "proteasome (prosome, macropain)
subunit, beta type, 1" species:7955 "Danio rerio" [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 ZFIN:ZDB-GENE-040618-2
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 HOVERGEN:HBG000961 MEROPS:T01.986
HOGENOM:HOG000091081 KO:K02732 CTD:5689 OrthoDB:EOG4PG61P
GeneTree:ENSGT00550000075035 OMA:YDPIGHC EMBL:BX323887
EMBL:BC085580 EMBL:AY648806 IPI:IPI00483526 RefSeq:NP_001003889.1
UniGene:Dr.76303 SMR:Q6DRF3 STRING:Q6DRF3
Ensembl:ENSDART00000007231 GeneID:445413 KEGG:dre:445413
InParanoid:Q6DRF3 NextBio:20832117 Uniprot:Q6DRF3
Length = 237
Score = 342 (125.4 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 68/158 (43%), Positives = 97/158 (61%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTYN 69
P++H FSPY+ NGGT +AVAG D+AI+ASDTRLS GY+I++R+ K +
Sbjct: 21 PVEHKFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSG 80
Query: 70 F----LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
F L + I +MY H +NK M++ ++A M+S ++YG+RFFPYY II GLD E
Sbjct: 81 FHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE 140
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVG 163
G+G VYS+DP+G +R ++ DNQ+G
Sbjct: 141 GRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG 178
Score = 194 (73.4 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N ENV+ P+ EKA+ +VKD F +AAERD+YTGD + +C ++K+GIKE PLRK
Sbjct: 177 IGFKNMENVEHVPLTQEKAVQLVKDVFISAAERDVYTGDALKVCIVSKEGIKEEIVPLRK 236
Query: 261 D 261
D
Sbjct: 237 D 237
>UNIPROTKB|G5E589 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 UniGene:Bt.7040
GeneTree:ENSGT00550000075035 OMA:YDPIGHC EMBL:DAAA02027595
Ensembl:ENSBTAT00000010108 Uniprot:G5E589
Length = 241
Score = 339 (124.4 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 70/158 (44%), Positives = 99/158 (62%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 NFLMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T+T I+ +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVG 163
GKG VYS+DP+G +R +F+ DNQVG
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVG 182
Score = 191 (72.3 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 32/61 (52%), Positives = 48/61 (78%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI+E PLRK
Sbjct: 181 VGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGIREETVPLRK 240
Query: 261 D 261
D
Sbjct: 241 D 241
>UNIPROTKB|I3LQ51 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02732 CTD:5689
GeneTree:ENSGT00550000075035 OMA:YDPIGHC RefSeq:NP_001231282.1
UniGene:Ssc.871 Ensembl:ENSSSCT00000023500 GeneID:100621969
KEGG:ssc:100621969 Uniprot:I3LQ51
Length = 241
Score = 335 (123.0 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 70/158 (44%), Positives = 98/158 (62%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PSQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 NFLMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T+T I+ +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVG 163
GKG VYS+DP+G +R +F+ DNQVG
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVG 182
Score = 192 (72.6 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 31/61 (50%), Positives = 48/61 (78%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+G++E PLRK
Sbjct: 181 VGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGVREETVPLRK 240
Query: 261 D 261
D
Sbjct: 241 D 241
>UNIPROTKB|Q2TBX6 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type-1" species:9913
"Bos taurus" [GO:0005839 "proteasome core complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 PDB:1IRU PDBsum:1IRU
HOVERGEN:HBG000961 MEROPS:T01.986 HOGENOM:HOG000091081 KO:K02732
EMBL:BC109494 IPI:IPI00722440 RefSeq:NP_001033628.1 UniGene:Bt.7040
ProteinModelPortal:Q2TBX6 SMR:Q2TBX6 STRING:Q2TBX6 PRIDE:Q2TBX6
GeneID:514237 KEGG:bta:514237 CTD:5689 InParanoid:Q2TBX6
OrthoDB:EOG4PG61P EvolutionaryTrace:Q2TBX6 NextBio:20871244
Uniprot:Q2TBX6
Length = 241
Score = 339 (124.4 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 70/158 (44%), Positives = 99/158 (62%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 NFLMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T+T I+ +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVG 163
GKG VYS+DP+G +R +F+ DNQVG
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVG 182
Score = 184 (69.8 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 31/61 (50%), Positives = 47/61 (77%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI+ PLRK
Sbjct: 181 VGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGIRGETVPLRK 240
Query: 261 D 261
D
Sbjct: 241 D 241
>UNIPROTKB|P20618 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type-1" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=ISS] [GO:0000502
"proteasome complex" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 DrugBank:DB00188 GO:GO:0005839 GO:GO:0004298
EMBL:AL031259 eggNOG:COG0638 HOVERGEN:HBG000961 MEROPS:T01.986
HOGENOM:HOG000091081 KO:K02732 CTD:5689 OrthoDB:EOG4PG61P
OMA:YDPIGHC EMBL:D00761 EMBL:BT019720 EMBL:AB451312 EMBL:AB451442
EMBL:BC000508 EMBL:BC020807 IPI:IPI00025019 PIR:S15973
RefSeq:NP_002784.1 UniGene:Hs.352768 ProteinModelPortal:P20618
SMR:P20618 IntAct:P20618 MINT:MINT-3009312 STRING:P20618
PhosphoSite:P20618 DMDM:130853 REPRODUCTION-2DPAGE:IPI00025019
UCD-2DPAGE:P20618 PaxDb:P20618 PeptideAtlas:P20618 PRIDE:P20618
DNASU:5689 Ensembl:ENST00000262193 GeneID:5689 KEGG:hsa:5689
UCSC:uc003qxr.3 GeneCards:GC06M170844 HGNC:HGNC:9537 HPA:CAB033911
HPA:HPA029635 HPA:HPA029637 MIM:602017 neXtProt:NX_P20618
PharmGKB:PA33882 InParanoid:P20618 PhylomeDB:P20618
BindingDB:P20618 ChEMBL:CHEMBL4208 ChiTaRS:PSMB1 GenomeRNAi:5689
NextBio:22098 Bgee:P20618 CleanEx:HS_PSMB1 Genevestigator:P20618
GermOnline:ENSG00000008018 Uniprot:P20618
Length = 241
Score = 338 (124.0 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 71/158 (44%), Positives = 98/158 (62%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY NGGT +A+AG D+AI+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 NFLMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T+T I+ +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVG 163
GKG VYS+DP+G +R +F+ DNQVG
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVG 182
Score = 185 (70.2 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 31/61 (50%), Positives = 47/61 (77%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI+E LRK
Sbjct: 181 VGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRK 240
Query: 261 D 261
D
Sbjct: 241 D 241
>FB|FBgn0002284 [details] [associations]
symbol:Prosbeta6 "Proteasome beta6 subunit" species:7227
"Drosophila melanogaster" [GO:0005839 "proteasome core complex"
evidence=ISS;NAS] [GO:0004175 "endopeptidase activity"
evidence=ISS;NAS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006508 "proteolysis" evidence=NAS] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 EMBL:AE014296 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.986 KO:K02732
GeneTree:ENSGT00550000075035 OMA:YDPIGHC EMBL:U00790 EMBL:AY051697
RefSeq:NP_524115.1 UniGene:Dm.2536 ProteinModelPortal:P40304
SMR:P40304 DIP:DIP-23672N IntAct:P40304 MINT:MINT-754870
STRING:P40304 PaxDb:P40304 EnsemblMetazoa:FBtr0075360 GeneID:39855
KEGG:dme:Dmel_CG4097 CTD:39855 FlyBase:FBgn0002284
InParanoid:P40304 OrthoDB:EOG4X3FHH PhylomeDB:P40304
GenomeRNAi:39855 NextBio:815727 Bgee:P40304 GermOnline:CG4097
Uniprot:P40304
Length = 235
Score = 367 (134.2 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 77/162 (47%), Positives = 102/162 (62%)
Query: 10 ETPIQHH--FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPT 67
+ P H FSPY NGG+ VA+AG D+A+IA+DTRLS+GYNI++R QSKLF
Sbjct: 13 QVPGMKHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVL 72
Query: 68 -----YNFLMIFTITI-LPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAG 121
+ + T +I + Q Y H H + M+T ++A+M+SI MY +RFFPYY S I+AG
Sbjct: 73 GSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAG 132
Query: 122 LDPEGKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVG 163
+D EGKG VYSYDPIGH E+A +R DNQ+G
Sbjct: 133 IDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIG 174
Score = 144 (55.7 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 205 NQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
N E+ DK + E+A+SV D F +AAERDIYTGD V + ITKDGI+ LR+D
Sbjct: 179 NLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>SGD|S000000137 [details] [associations]
symbol:PRE7 "Beta 6 subunit of the 20S proteasome"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IC] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019774 "proteasome core complex,
beta-subunit complex" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IC] [GO:0004175 "endopeptidase
activity" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0034515 "proteasome storage
granule" evidence=IC] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0010499 "proteasomal ubiquitin-independent protein catabolic
process" evidence=IDA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
SGD:S000000137 GO:GO:0005634 GO:GO:0043161 GO:GO:0005789
EMBL:BK006936 EMBL:X78214 GO:GO:0010499 PDB:1VSY PDB:3L5Q
PDBsum:1VSY PDBsum:3L5Q EMBL:M34777 GO:GO:0004298 GO:GO:0034515
PDB:4G4S PDBsum:4G4S PDB:4B4T PDBsum:4B4T eggNOG:COG0638 PDB:1FNT
PDB:1G0U PDB:1G65 PDB:1JD2 PDB:1RYP PDB:1Z7Q PDB:2F16 PDB:2FAK
PDB:2GPL PDB:2ZCY PDB:3BDM PDB:3D29 PDB:3DY3 PDB:3DY4 PDB:3E47
PDB:3GPJ PDB:3GPT PDB:3GPW PDB:3HYE PDB:3MG0 PDB:3MG4 PDB:3MG6
PDB:3MG7 PDB:3MG8 PDB:3NZJ PDB:3NZW PDB:3NZX PDB:3OEU PDB:3OEV
PDB:3OKJ PDB:3SDI PDB:3SDK PDB:3SHJ PDB:3TDD PDB:3UN4 PDB:3UN8
PDB:4FZC PDB:4FZG PDB:4GK7 PDBsum:1FNT PDBsum:1G0U PDBsum:1G65
PDBsum:1JD2 PDBsum:1RYP PDBsum:1Z7Q PDBsum:2F16 PDBsum:2FAK
PDBsum:2GPL PDBsum:2ZCY PDBsum:3BDM PDBsum:3D29 PDBsum:3DY3
PDBsum:3DY4 PDBsum:3E47 PDBsum:3GPJ PDBsum:3GPT PDBsum:3GPW
PDBsum:3HYE PDBsum:3MG0 PDBsum:3MG4 PDBsum:3MG6 PDBsum:3MG7
PDBsum:3MG8 PDBsum:3NZJ PDBsum:3NZW PDBsum:3NZX PDBsum:3OEU
PDBsum:3OEV PDBsum:3OKJ PDBsum:3SDI PDBsum:3SDK PDBsum:3SHJ
PDBsum:3TDD PDBsum:3UN4 PDBsum:3UN8 PDBsum:4FZC PDBsum:4FZG
PDBsum:4GK7 MEROPS:T01.986 HOGENOM:HOG000091081 KO:K02732
GeneTree:ENSGT00550000075035 OMA:YDPIGHC GO:GO:0019774
OrthoDB:EOG4PG98X EMBL:D00845 EMBL:Z35802 EMBL:AY558462 PIR:S42436
RefSeq:NP_009512.1 ProteinModelPortal:P23724 SMR:P23724
DIP:DIP-2821N IntAct:P23724 MINT:MINT-592611 STRING:P23724
UCD-2DPAGE:P23724 PaxDb:P23724 PeptideAtlas:P23724
EnsemblFungi:YBL041W GeneID:852239 KEGG:sce:YBL041W CYGD:YBL041w
BindingDB:P23724 ChEMBL:CHEMBL4904 EvolutionaryTrace:P23724
NextBio:970787 Genevestigator:P23724 GermOnline:YBL041W
Uniprot:P23724
Length = 241
Score = 315 (115.9 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 68/159 (42%), Positives = 89/159 (55%)
Query: 11 TPIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTY 68
TPI+H F+PY DNGGT + +AG D+A++A DTR Y+I +R + K+FD
Sbjct: 15 TPIEHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSAN 74
Query: 69 NFLMIFTITILPFQ----MYLHEHN-KVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLD 123
F + F+ Y +HN K +S S A+ I ++YGKRFFPYY TIIAGLD
Sbjct: 75 GFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLD 134
Query: 124 PEGKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQV 162
+GKG VYS+DP+G ER R DNQV
Sbjct: 135 EDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQV 173
Score = 114 (45.2 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 216 LEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
+E+ I +V+D+FT+A ER I GDG+ + +TKDG+++ + L++D
Sbjct: 196 VEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241
>TAIR|locus:2101846 [details] [associations]
symbol:PBF1 species:3702 "Arabidopsis thaliana"
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008233 "peptidase activity"
evidence=ISS] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=TAS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0048046 "apoplast"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0005839 "proteasome core complex" evidence=TAS]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0048046 GO:GO:0009817 GO:GO:0000502
EMBL:AL162295 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 MEROPS:T01.986 EMBL:X67338 EMBL:X79806 EMBL:AF043537
EMBL:AY062790 EMBL:AY081571 EMBL:AY086619 EMBL:AK220787 EMBL:Z26405
IPI:IPI00529170 PIR:T47893 RefSeq:NP_001190146.1 RefSeq:NP_191641.1
UniGene:At.20500 UniGene:At.48789 ProteinModelPortal:P42742
SMR:P42742 IntAct:P42742 STRING:P42742 PaxDb:P42742 PRIDE:P42742
EnsemblPlants:AT3G60820.1 EnsemblPlants:AT3G60820.3 GeneID:825253
KEGG:ath:AT3G60820 TAIR:At3g60820 HOGENOM:HOG000091081
InParanoid:P42742 KO:K02732 PhylomeDB:P42742
ProtClustDB:CLSN2685215 Genevestigator:P42742 Uniprot:P42742
Length = 223
Score = 305 (112.4 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 64/156 (41%), Positives = 94/156 (60%)
Query: 14 QH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSK---LFDHYYYRPTYN 69
QH ++SPY +NGGT VA+AG DY +IA+DTR+S GY+I +R+ SK L D +
Sbjct: 4 QHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGF 63
Query: 70 FLMIFTIT-ILPFQ--MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
+ + +L + +Y H+HNK MS ++A+++S +Y KRFFPYY ++ GLD EG
Sbjct: 64 QADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEG 123
Query: 127 KGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQV 162
KGCV++YD +G ER + DNQ+
Sbjct: 124 KGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQL 159
Score = 116 (45.9 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 191 NALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
N L S +LL Q++ TP+ +A+ +VK F +A ERDIYTGD + + + DG
Sbjct: 157 NQLKSPSPLLLP--KQDS--NTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADG 212
Query: 251 IKEYNFPLRKD 261
IK LRKD
Sbjct: 213 IKTELMDLRKD 223
>ASPGD|ASPL0000030334 [details] [associations]
symbol:AN5784 species:162425 "Emericella nidulans"
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0019774 "proteasome core complex, beta-subunit
complex" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0010499 "proteasomal
ubiquitin-independent protein catabolic process" evidence=IEA]
InterPro:IPR001353 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476
EMBL:AACD01000098 EMBL:BN001305 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.986 HOGENOM:HOG000091081
KO:K02732 OMA:YDPIGHC OrthoDB:EOG4PG98X RefSeq:XP_663388.1
ProteinModelPortal:Q5B0Z6 SMR:Q5B0Z6 STRING:Q5B0Z6
EnsemblFungi:CADANIAT00003266 GeneID:2872075 KEGG:ani:AN5784.2
Uniprot:Q5B0Z6
Length = 261
Score = 289 (106.8 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 62/165 (37%), Positives = 90/165 (54%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF----DHYYYRPTYN 69
+H F PY+DNGG+ + + G D+A++A DTR ++GYNI +R K+F + + +
Sbjct: 28 EHSFYPYTDNGGSVLGITGKDFAVLAGDTRSTSGYNINSRYVPKVFKIGGEDETGKGAHI 87
Query: 70 FLMI--FTITILPFQ--------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTII 119
L + F L + MY ++H K MS + A+ +S ++Y KRFFPYY I+
Sbjct: 88 LLSVVGFAADGLALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVQAIL 147
Query: 120 AGLDPEGKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVGI 164
AGLD EGKG +Y YDP+G ER R DNQV +
Sbjct: 148 AGLDEEGKGALYGYDPVGSYEREQCRSAGAASSLIMPFLDNQVNL 192
Score = 120 (47.3 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 213 PVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
P+ E +V+DAFT+A ER I GDG+ + IT DGI+E PL+KD
Sbjct: 213 PMSRETVEQLVRDAFTSAVERHIEVGDGLQMLVITADGIEEVYHPLKKD 261
>UNIPROTKB|F5H9Q1 [details] [associations]
symbol:CNBF3630 "Proteasome subunit beta type"
species:283643 "Cryptococcus neoformans var. neoformans B-3501A"
[GO:0010499 "proteasomal ubiquitin-independent protein catabolic
process" evidence=ISS] [GO:0019774 "proteasome core complex,
beta-subunit complex" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0010499 GO:GO:0004298
MEROPS:T01.986 KO:K02732 GO:GO:0019774 EMBL:AAEY01000032
RefSeq:XP_774684.1 ProteinModelPortal:F5H9Q1 SMR:F5H9Q1
GeneID:4936915 KEGG:cnb:CNBF3630 Uniprot:F5H9Q1
Length = 272
Score = 325 (119.5 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 69/158 (43%), Positives = 90/158 (56%)
Query: 12 PIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTY 68
P+QHH F+PYSDNGG+ +A+AG D++IIA DTR S GY+I TR K++ T
Sbjct: 18 PVQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATN 77
Query: 69 NFLMI---FTITILP-FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F F + + Y H HNK M S+A+MI M+YGKRFFPYY I+ G++
Sbjct: 78 GFAADGNNFVKRVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEE 137
Query: 125 EGKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQV 162
+G G VYS+DP+G ER R DNQV
Sbjct: 138 DGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQV 175
Score = 79 (32.9 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 214 VPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
+PL +S+V D+FT+A ER I GDG+ + + G
Sbjct: 194 LPLSTVLSLVVDSFTSATERHIEVGDGMEIYVVMAKG 230
>UNIPROTKB|Q5KFP2 [details] [associations]
symbol:CNF01080 "Proteasome subunit beta type"
species:214684 "Cryptococcus neoformans var. neoformans JEC21"
[GO:0010499 "proteasomal ubiquitin-independent protein catabolic
process" evidence=ISS] [GO:0019774 "proteasome core complex,
beta-subunit complex" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0010499 GO:GO:0004298 KO:K02732
GO:GO:0019774 OrthoDB:EOG4PG98X EMBL:AE017346 RefSeq:XP_571254.1
ProteinModelPortal:Q5KFP2 SMR:Q5KFP2 GeneID:3258342
GenomeReviews:AE017346_GR GenomeReviews:CM000045_GR
KEGG:cne:CNF01080 Uniprot:Q5KFP2
Length = 272
Score = 325 (119.5 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 69/158 (43%), Positives = 90/158 (56%)
Query: 12 PIQHH-FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTY 68
P+QHH F+PYSDNGG+ +A+AG D++IIA DTR S GY+I TR K++ T
Sbjct: 18 PVQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATN 77
Query: 69 NFLMI---FTITILP-FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP 124
F F + + Y H HNK M S+A+MI M+YGKRFFPYY I+ G++
Sbjct: 78 GFAADGNNFVKRVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEE 137
Query: 125 EGKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQV 162
+G G VYS+DP+G ER R DNQV
Sbjct: 138 DGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQV 175
Score = 79 (32.9 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 214 VPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG 250
+PL +S+V D+FT+A ER I GDG+ + + G
Sbjct: 194 LPLSTVLSLVVDSFTSATERHIEVGDGMEIYVVMAKG 230
>POMBASE|SPAC22F8.06 [details] [associations]
symbol:pam1 "20S proteasome complex subunit beta 6"
species:4896 "Schizosaccharomyces pombe" [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019774 "proteasome core complex, beta-subunit complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
PomBase:SPAC22F8.06 GO:GO:0005829 GO:GO:0005634 GO:GO:0007346
EMBL:CU329670 GO:GO:0043161 GenomeReviews:CU329670_GR GO:GO:0004298
eggNOG:COG0638 MEROPS:T01.986 HOGENOM:HOG000091081 KO:K02732
OMA:YDPIGHC GO:GO:0019774 EMBL:AB012135 PIR:T38196
RefSeq:NP_594729.1 ProteinModelPortal:Q9UQY2 SMR:Q9UQY2
STRING:Q9UQY2 PRIDE:Q9UQY2 EnsemblFungi:SPAC22F8.06.1
GeneID:2542062 KEGG:spo:SPAC22F8.06 OrthoDB:EOG4PG98X
NextBio:20803136 Uniprot:Q9UQY2
Length = 225
Score = 282 (104.3 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 64/157 (40%), Positives = 83/157 (52%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT--- 67
Q F PY NGGTTVA+AG +AI+A DTR GYNI TR Q ++ D +
Sbjct: 3 QSQFDPYVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFE 62
Query: 68 YNFLMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGK 127
+ L + +Y H + MS S A M+ ++YGKRFFPYY T +AG+D EGK
Sbjct: 63 ADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGK 122
Query: 128 GCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVGI 164
G +YS+DP+G ER R DNQV +
Sbjct: 123 GEIYSFDPVGSYEREWCRAGGSAANFITPFLDNQVNL 159
Score = 113 (44.8 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 202 GFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
G +E + + LE+A+ + DAFT+A ER I GD V + ITK+G++ PL+KD
Sbjct: 166 GSHGKERKPRRLLKLEEAMKITTDAFTSAGERHIEVGDSVLVKIITKEGVETRIIPLKKD 225
>DICTYBASE|DDB_G0272969 [details] [associations]
symbol:psmB1 "proteasome subunit beta type 1"
species:44689 "Dictyostelium discoideum" [GO:0008233 "peptidase
activity" evidence=IEA;IDA] [GO:0006508 "proteolysis"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IPI]
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0004175
"endopeptidase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 dictyBase:DDB_G0272969
GO:GO:0005634 GO:GO:0005737 GO:GO:0006508 GenomeReviews:CM000151_GR
EMBL:AAFI02000008 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 KO:K02732 OMA:YDPIGHC RefSeq:XP_001134620.1
HSSP:P23724 ProteinModelPortal:Q86A21 STRING:Q86A21 PRIDE:Q86A21
EnsemblProtists:DDB0232957 GeneID:8618570 KEGG:ddi:DDB_G0272969
ProtClustDB:CLSZ2733551 Uniprot:Q86A21
Length = 236
Score = 278 (102.9 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 63/162 (38%), Positives = 89/162 (54%)
Query: 10 ETPIQH-HFSPYSDNGGTTVAVAGPDYAIIASDTRLS-AGYNIYTREQSKLFD--HYYYR 65
+ PI H F Y DNGGT +AVAG DY +IA DTR+S GY I TR+ +K+F
Sbjct: 15 QQPISHGRFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVL 74
Query: 66 PTYNFLMIFTITILP-----FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIA 120
T + TI + + + EH K MST ++A+ +S +Y KRFFPYYT ++A
Sbjct: 75 ATSG-MQADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVA 133
Query: 121 GLDPEGKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQV 162
G+D +G+G +++YD +G ER + DNQV
Sbjct: 134 GVDEQGEGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQV 175
Score = 112 (44.5 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 205 NQENVD-KTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
NQ+ V+ V E+ +S VKD+ T+A ERDIYTGD + + K+G+ F L+ D
Sbjct: 179 NQQIVEGNKDVSCEQVVSFVKDSITSAGERDIYTGDFADIVVVDKNGVHWEKFELKLD 236
>UNIPROTKB|Q6PDW4 [details] [associations]
symbol:Psmb1 "Proteasome subunit beta type" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 RGD:621092
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 EMBL:CH474033 HOVERGEN:HBG000961 MEROPS:T01.986
GeneTree:ENSGT00550000075035 HSSP:P23724 OMA:EARYYQF
IPI:IPI00191749 UniGene:Rn.6016 EMBL:BC058455 SMR:Q6PDW4
STRING:Q6PDW4 Ensembl:ENSRNOT00000002037 InParanoid:Q6PDW4
Genevestigator:Q6PDW4 Uniprot:Q6PDW4
Length = 240
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 84/221 (38%), Positives = 125/221 (56%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 24 PVQMRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 83
Query: 69 NFLMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T+T I+ +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 84 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 143
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+ DNQVG K M++V T D A
Sbjct: 144 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGF-----KNMQNVEHVPLTLDRA 198
Query: 186 --LTREINALSSKLTILLG--FR----NQENVDKTPVPLEK 218
L +++ +++ + G R +E + + VPL K
Sbjct: 199 MRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRK 239
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 32/61 (52%), Positives = 48/61 (78%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI+E PLRK
Sbjct: 180 VGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRK 239
Query: 261 D 261
D
Sbjct: 240 D 240
>MGI|MGI:104884 [details] [associations]
symbol:Psmb1 "proteasome (prosome, macropain) subunit, beta
type 1" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 MGI:MGI:104884 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_102124 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 PDB:3UNB PDB:3UNE PDB:3UNF PDB:3UNH PDBsum:3UNB
PDBsum:3UNE PDBsum:3UNF PDBsum:3UNH HOVERGEN:HBG000961
MEROPS:T01.986 HOGENOM:HOG000091081 KO:K02732 CTD:5689
OrthoDB:EOG4PG61P ChiTaRS:PSMB1 EMBL:U60824 EMBL:X80686
EMBL:AK077520 EMBL:BC018351 IPI:IPI00113845 RefSeq:NP_035315.1
UniGene:Mm.32912 ProteinModelPortal:O09061 SMR:O09061 IntAct:O09061
STRING:O09061 PhosphoSite:O09061 PaxDb:O09061 PRIDE:O09061
Ensembl:ENSMUST00000014913 GeneID:19170 KEGG:mmu:19170
InParanoid:O09061 OMA:EARYYQF NextBio:295838 Bgee:O09061
Genevestigator:O09061 GermOnline:ENSMUSG00000014769 Uniprot:O09061
Length = 240
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 84/221 (38%), Positives = 125/221 (56%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 24 PVQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 83
Query: 69 NFLMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T+T I+ +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 84 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 143
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+ DNQVG K M++V T D A
Sbjct: 144 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGF-----KNMQNVEHVPLTLDRA 198
Query: 186 --LTREINALSSKLTILLG--FR----NQENVDKTPVPLEK 218
L +++ +++ + G R +E + + VPL K
Sbjct: 199 MRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRK 239
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 32/61 (52%), Positives = 48/61 (78%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI+E PLRK
Sbjct: 180 VGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRK 239
Query: 261 D 261
D
Sbjct: 240 D 240
>RGD|621092 [details] [associations]
symbol:Psmb1 "proteasome (prosome, macropain) subunit, beta type
1" species:10116 "Rattus norvegicus" [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=IEA;ISO;ISS] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
RGD:621092 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 HOVERGEN:HBG000961 MEROPS:T01.986
HOGENOM:HOG000091081 KO:K02732 CTD:5689 OrthoDB:EOG4PG61P
EMBL:X52783 IPI:IPI00191749 PIR:S09696 RefSeq:NP_446042.1
UniGene:Rn.6016 ProteinModelPortal:P18421 SMR:P18421 IntAct:P18421
STRING:P18421 PhosphoSite:P18421 PRIDE:P18421 GeneID:94198
KEGG:rno:94198 UCSC:RGD:621092 InParanoid:P18421 NextBio:617862
ArrayExpress:P18421 Genevestigator:P18421
GermOnline:ENSRNOG00000001488 Uniprot:P18421
Length = 240
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 84/221 (38%), Positives = 125/221 (56%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P+Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 24 PVQMRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 83
Query: 69 NFLMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T+T I+ +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 84 FHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEE 143
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVGIIQHSSKQMKSVLGGIRTHDLA 185
GKG VYS+DP+G +R +F+ DNQVG K M++V T D A
Sbjct: 144 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGF-----KNMQNVEHVPLTLDRA 198
Query: 186 --LTREINALSSKLTILLG--FR----NQENVDKTPVPLEK 218
L +++ +++ + G R +E + + VPL K
Sbjct: 199 MRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRK 239
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 32/61 (52%), Positives = 48/61 (78%)
Query: 201 LGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRK 260
+GF+N +NV+ P+ L++A+ +VKD F +AAERD+YTGD + +C +TK+GI+E PLRK
Sbjct: 180 VGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRK 239
Query: 261 D 261
D
Sbjct: 240 D 240
>WB|WBGene00003952 [details] [associations]
symbol:pbs-6 species:6239 "Caenorhabditis elegans"
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0040007 GO:GO:0018991 GO:GO:0002119 GO:GO:0010171
GO:GO:0040011 GO:GO:0051603 EMBL:FO080288 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.986 HOGENOM:HOG000091081
KO:K02732 EMBL:AF303265 PIR:S44611 RefSeq:NP_498806.1
UniGene:Cel.23369 ProteinModelPortal:P34286 SMR:P34286
DIP:DIP-24619N IntAct:P34286 MINT:MINT-210761 STRING:P34286
PaxDb:P34286 EnsemblMetazoa:C02F5.9.1 EnsemblMetazoa:C02F5.9.2
GeneID:176161 KEGG:cel:CELE_C02F5.9 UCSC:C02F5.9.1 CTD:176161
WormBase:C02F5.9 GeneTree:ENSGT00550000075035 InParanoid:P34286
OMA:YDPIGHC NextBio:891386 Uniprot:P34286
Length = 258
Score = 241 (89.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 55/157 (35%), Positives = 83/157 (52%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKL--FDHYYYRPTYNF 70
+ ++PYS GG+T A++G ++AI+ASDTR++ NI TR+ K+ + T F
Sbjct: 41 RQRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGF 100
Query: 71 ----LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
L + + Y ++ MS A+++S +Y +RFFPYYT I+AG+D G
Sbjct: 101 YGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHG 160
Query: 127 KGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVG 163
KG V+SYDPIG ER + D Q+G
Sbjct: 161 KGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQIG 197
Score = 103 (41.3 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 207 ENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG--IKEYNFPLRKD 261
E ++ + L++AIS++KD+F AAER+I TGD +HL I + G + PLR+D
Sbjct: 203 EGYERPELTLDRAISLMKDSFRGAAEREISTGDKIHL-VIAEAGKPVVVKFLPLRED 258
>UNIPROTKB|P34286 [details] [associations]
symbol:pbs-6 "Proteasome subunit beta type-1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0040007 GO:GO:0018991 GO:GO:0002119 GO:GO:0010171
GO:GO:0040011 GO:GO:0051603 EMBL:FO080288 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.986 HOGENOM:HOG000091081
KO:K02732 EMBL:AF303265 PIR:S44611 RefSeq:NP_498806.1
UniGene:Cel.23369 ProteinModelPortal:P34286 SMR:P34286
DIP:DIP-24619N IntAct:P34286 MINT:MINT-210761 STRING:P34286
PaxDb:P34286 EnsemblMetazoa:C02F5.9.1 EnsemblMetazoa:C02F5.9.2
GeneID:176161 KEGG:cel:CELE_C02F5.9 UCSC:C02F5.9.1 CTD:176161
WormBase:C02F5.9 GeneTree:ENSGT00550000075035 InParanoid:P34286
OMA:YDPIGHC NextBio:891386 Uniprot:P34286
Length = 258
Score = 241 (89.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 55/157 (35%), Positives = 83/157 (52%)
Query: 14 QHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAG-YNIYTREQSKL--FDHYYYRPTYNF 70
+ ++PYS GG+T A++G ++AI+ASDTR++ NI TR+ K+ + T F
Sbjct: 41 RQRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGF 100
Query: 71 ----LMIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
L + + Y ++ MS A+++S +Y +RFFPYYT I+AG+D G
Sbjct: 101 YGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHG 160
Query: 127 KGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVG 163
KG V+SYDPIG ER + D Q+G
Sbjct: 161 KGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQIG 197
Score = 103 (41.3 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 207 ENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDG--IKEYNFPLRKD 261
E ++ + L++AIS++KD+F AAER+I TGD +HL I + G + PLR+D
Sbjct: 203 EGYERPELTLDRAISLMKDSFRGAAEREISTGDKIHL-VIAEAGKPVVVKFLPLRED 258
>UNIPROTKB|F1PF02 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
GeneTree:ENSGT00550000075035 EMBL:AAEX03008668
Ensembl:ENSCAFT00000028947 OMA:KMSCPAM Uniprot:F1PF02
Length = 189
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 69/157 (43%), Positives = 97/157 (61%)
Query: 12 PIQHHFSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTY 68
P Q FSPY+ NGGT +A+AG D++I+ASDTRLS G++I+TR+ K + D +
Sbjct: 25 PQQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSG 84
Query: 69 NFLMIFTIT-ILP--FQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
T+T I+ +MY H +NK M+T ++A M+S ++Y +RFFPYY II GLD E
Sbjct: 85 FHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
Query: 126 GKGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQV 162
GKG VYS+DP+G +R +F+ DNQV
Sbjct: 145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV 181
>ASPGD|ASPL0000010099 [details] [associations]
symbol:AN3493 species:162425 "Emericella nidulans"
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0019748 "secondary metabolic process"
evidence=IEP;IGC] InterPro:IPR001353 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS51476 EMBL:BN001302 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.986
HOGENOM:HOG000091081 KO:K02732 OrthoDB:EOG4PG98X EMBL:AACD01000059
RefSeq:XP_661097.1 ProteinModelPortal:Q5B7I7 STRING:Q5B7I7
EnsemblFungi:CADANIAT00005264 GeneID:2872915 KEGG:ani:AN3493.2
OMA:NINTRYE Uniprot:Q5B7I7
Length = 215
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 70/212 (33%), Positives = 104/212 (49%)
Query: 17 FSPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTI 76
F PY+ NGG T+ V+GPD+AI+A DTR +AGYNI TR + K+F R + +
Sbjct: 7 FYPYTSNGGATLGVSGPDFAILAGDTRSTAGYNINTRYEPKVFTIQDARDRSIVISVIGF 66
Query: 77 TI----LPFQ------MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG 126
L + MY ++H K + + A+ +S M+Y KRFFPY T++AG+D +G
Sbjct: 67 AADGRALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDADG 126
Query: 127 KGCVYSYDPIGHTERANFRXXXXXXXXXXXXXDNQVGIIQHSSKQMKSVLGGIRTHDLAL 186
+G +Y YDP G E+ + D+Q +Q S Q L +R
Sbjct: 127 QGAIYYYDPAGCIEKRSHCAAGEASSLMLPFLDSQAPRLQPLSLQTAQQL--VRDAYTGA 184
Query: 187 TREINALSSKLTILLGFRNQENVDKTPVPLEK 218
T + L +L+ R E V + V L+K
Sbjct: 185 TERHIEVGDHLQMLVVTR--EGVSEQLVDLKK 214
Score = 107 (42.7 bits), Expect = 0.00071, P = 0.00071
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 198 TILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFP 257
+++L F + + P+ L+ A +V+DA+T A ER I GD + + +T++G+ E
Sbjct: 152 SLMLPFLDSQAPRLQPLSLQTAQQLVRDAYTGATERHIEVGDHLQMLVVTREGVSEQLVD 211
Query: 258 LRKD 261
L+KD
Sbjct: 212 LKKD 215
>RGD|61875 [details] [associations]
symbol:Psmb3 "proteasome (prosome, macropain) subunit, beta type
3" species:10116 "Rattus norvegicus" [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=IEA;ISO;ISS] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
EMBL:D21800 RGD:61875 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02735 eggNOG:COG0638 MEROPS:T01.983
HOGENOM:HOG000090523 CTD:5691 HOVERGEN:HBG004446 OrthoDB:EOG4XH012
EMBL:BC084723 IPI:IPI00214889 PIR:S40468 RefSeq:NP_058981.1
UniGene:Rn.94551 ProteinModelPortal:P40112 SMR:P40112 IntAct:P40112
STRING:P40112 PhosphoSite:P40112 World-2DPAGE:0004:P40112
PRIDE:P40112 GeneID:29676 KEGG:rno:29676 UCSC:RGD:61875
InParanoid:P40112 NextBio:610015 ArrayExpress:P40112
Genevestigator:P40112 GermOnline:ENSRNOG00000012938 Uniprot:P40112
Length = 205
Score = 142 (55.0 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 42/127 (33%), Positives = 64/127 (50%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIF 74
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 2 SVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 61
Query: 75 TITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCV 130
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K +
Sbjct: 62 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 121
Query: 131 YSYDPIG 137
S D IG
Sbjct: 122 CSLDLIG 128
Score = 50 (22.7 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 217 EKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
E + A A +RD +G GV + I KD I R D
Sbjct: 161 EHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
>UNIPROTKB|P40112 [details] [associations]
symbol:Psmb3 "Proteasome subunit beta type-3" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 EMBL:D21800 RGD:61875
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 KO:K02735 eggNOG:COG0638 MEROPS:T01.983
HOGENOM:HOG000090523 CTD:5691 HOVERGEN:HBG004446 OrthoDB:EOG4XH012
EMBL:BC084723 IPI:IPI00214889 PIR:S40468 RefSeq:NP_058981.1
UniGene:Rn.94551 ProteinModelPortal:P40112 SMR:P40112 IntAct:P40112
STRING:P40112 PhosphoSite:P40112 World-2DPAGE:0004:P40112
PRIDE:P40112 GeneID:29676 KEGG:rno:29676 UCSC:RGD:61875
InParanoid:P40112 NextBio:610015 ArrayExpress:P40112
Genevestigator:P40112 GermOnline:ENSRNOG00000012938 Uniprot:P40112
Length = 205
Score = 142 (55.0 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 42/127 (33%), Positives = 64/127 (50%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIF 74
S S NGG +A+ G + IA+D R + T + K+F D Y +
Sbjct: 2 SVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 61
Query: 75 TITI-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCV 130
T+ L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K +
Sbjct: 62 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 121
Query: 131 YSYDPIG 137
S D IG
Sbjct: 122 CSLDLIG 128
Score = 50 (22.7 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 217 EKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
E + A A +RD +G GV + I KD I R D
Sbjct: 161 EHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
>MGI|MGI:1347014 [details] [associations]
symbol:Psmb3 "proteasome (prosome, macropain) subunit, beta
type 3" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=ISO] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=TAS]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
MGI:MGI:1347014 GO:GO:0005829 GO:GO:0005634 GO:GO:0004175
GO:GO:0030163 Reactome:REACT_102124 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 KO:K02735 eggNOG:COG0638 PDB:3UNB PDB:3UNE PDB:3UNF
PDB:3UNH PDBsum:3UNB PDBsum:3UNE PDBsum:3UNF PDBsum:3UNH
MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY CTD:5691
GeneTree:ENSGT00550000074820 HOVERGEN:HBG004446 OrthoDB:EOG4XH012
EMBL:AF060092 EMBL:AK002331 EMBL:BC014783 IPI:IPI00314467
RefSeq:NP_036101.1 UniGene:Mm.21874 ProteinModelPortal:Q9R1P1
SMR:Q9R1P1 IntAct:Q9R1P1 STRING:Q9R1P1 PhosphoSite:Q9R1P1
REPRODUCTION-2DPAGE:Q9R1P1 UCD-2DPAGE:Q9R1P1 PaxDb:Q9R1P1
PRIDE:Q9R1P1 Ensembl:ENSMUST00000103147 GeneID:26446 KEGG:mmu:26446
InParanoid:Q9R1P1 NextBio:304541 Bgee:Q9R1P1 Genevestigator:Q9R1P1
GermOnline:ENSMUSG00000069379 Uniprot:Q9R1P1
Length = 205
Score = 141 (54.7 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 5 SYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVA 64
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K + S
Sbjct: 65 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSL 124
Query: 134 DPIG 137
D IG
Sbjct: 125 DLIG 128
Score = 51 (23.0 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 217 EKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
E + A A +RD +G GV + I KD I R D
Sbjct: 161 EHLFETISQAMLNAVDRDAVSGMGVIVHVIEKDKITTRTLKARMD 205
>UNIPROTKB|P33672 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type-3" species:9913
"Bos taurus" [GO:0005839 "proteasome core complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02735 eggNOG:COG0638 PDB:1IRU
PDBsum:1IRU MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY
EMBL:BC102554 IPI:IPI00705755 PIR:A42762 PIR:B42762 PIR:C42762
PIR:D42762 PIR:G42762 RefSeq:NP_001029768.1 UniGene:Bt.44351
ProteinModelPortal:P33672 SMR:P33672 STRING:P33672 PRIDE:P33672
Ensembl:ENSBTAT00000004984 GeneID:533874 KEGG:bta:533874 CTD:5691
GeneTree:ENSGT00550000074820 HOVERGEN:HBG004446 InParanoid:P33672
OrthoDB:EOG4XH012 EvolutionaryTrace:P33672 NextBio:20876178
ArrayExpress:P33672 Uniprot:P33672
Length = 205
Score = 141 (54.7 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 5 SYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVA 64
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K + S
Sbjct: 65 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSL 124
Query: 134 DPIG 137
D IG
Sbjct: 125 DLIG 128
Score = 50 (22.7 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 217 EKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
E + A A +RD +G GV + I KD I R D
Sbjct: 161 EHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
>UNIPROTKB|E2QX17 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02735
OMA:MVSNLLY CTD:5691 GeneTree:ENSGT00550000074820 EMBL:AAEX03006484
RefSeq:NP_001239086.1 UniGene:Cfa.40500 Ensembl:ENSCAFT00000026270
GeneID:480537 KEGG:cfa:480537 NextBio:20855544 Uniprot:E2QX17
Length = 205
Score = 141 (54.7 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 5 SYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVA 64
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K + S
Sbjct: 65 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSL 124
Query: 134 DPIG 137
D IG
Sbjct: 125 DLIG 128
Score = 50 (22.7 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 217 EKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
E + A A +RD +G GV + I KD I R D
Sbjct: 161 EHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
>UNIPROTKB|P49720 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type-3" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=ISS] [GO:0000502
"proteasome complex" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0005654 GO:GO:0002479
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0051436 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
GO:GO:0006521 Reactome:REACT_383 GO:GO:0005839 GO:GO:0004298
KO:K02735 eggNOG:COG0638 MEROPS:T01.983 HOGENOM:HOG000090523
OMA:MVSNLLY CTD:5691 HOVERGEN:HBG004446 OrthoDB:EOG4XH012
EMBL:D26598 EMBL:BC013008 IPI:IPI00028004 PIR:S55041
RefSeq:NP_002786.2 UniGene:Hs.82793 ProteinModelPortal:P49720
SMR:P49720 IntAct:P49720 MINT:MINT-5001041 STRING:P49720
PhosphoSite:P49720 DMDM:20532411 OGP:P49720
REPRODUCTION-2DPAGE:IPI00028004 PaxDb:P49720 PeptideAtlas:P49720
PRIDE:P49720 DNASU:5691 Ensembl:ENST00000225426 GeneID:5691
KEGG:hsa:5691 UCSC:uc002hqr.3 GeneCards:GC17P036909
H-InvDB:HIX0030292 HGNC:HGNC:9540 MIM:602176 neXtProt:NX_P49720
PharmGKB:PA33885 InParanoid:P49720 PhylomeDB:P49720 ChiTaRS:PSMB3
GenomeRNAi:5691 NextBio:22106 Bgee:P49720 CleanEx:HS_PSMB3
Genevestigator:P49720 GermOnline:ENSG00000108294 Uniprot:P49720
Length = 205
Score = 141 (54.7 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 5 SYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVA 64
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K + S
Sbjct: 65 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSL 124
Query: 134 DPIG 137
D IG
Sbjct: 125 DLIG 128
Score = 47 (21.6 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 223 VKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
+ A A +RD +G GV + I KD I R D
Sbjct: 167 ISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
>UNIPROTKB|Q58634 [details] [associations]
symbol:psmB "Proteasome subunit beta" species:243232
"Methanocaldococcus jannaschii DSM 2661" [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0010498 "proteasomal protein catabolic
process" evidence=IDA] [GO:0019774 "proteasome core complex,
beta-subunit complex" evidence=IDA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR019983
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005737 GO:GO:0004175 GO:GO:0010498
EMBL:L77117 GenomeReviews:L77117_GR GO:GO:0004298 eggNOG:COG0638
PDB:3H4P PDBsum:3H4P GO:GO:0019774 MEROPS:T01.002 KO:K03433
HAMAP:MF_02113_A TIGRFAMs:TIGR03634 PIR:D64454 RefSeq:NP_248232.1
ProteinModelPortal:Q58634 SMR:Q58634 GeneID:1452133
KEGG:mja:MJ_1237 OMA:EKIWKID ProtClustDB:CLSK876502
EvolutionaryTrace:Q58634 Uniprot:Q58634
Length = 224
Score = 111 (44.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 33/120 (27%), Positives = 55/120 (45%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF--DHYYYRPTYNFL----MIFTIT 77
G TTV + D I+A+D R S G + +E KL+ D Y + I +
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 78 ILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPIG 137
I ++Y + + + A ++S +++ R FP+ T II G D ++S DP+G
Sbjct: 66 IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLG 125
Score = 90 (36.7 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 216 LEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIK 252
+E+ I + +A +A ERD ++G+G+ L ITKDG+K
Sbjct: 157 VEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVK 193
>UNIPROTKB|J3QKR3 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type-3" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
EMBL:AC006449 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
HGNC:HGNC:9540 ChiTaRS:PSMB3 Ensembl:ENST00000579088 Uniprot:J3QKR3
Length = 145
Score = 141 (54.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + IA+D R + T + K+F D Y + T+
Sbjct: 2 SYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVA 61
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K + S
Sbjct: 62 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSL 121
Query: 134 DPIG 137
D IG
Sbjct: 122 DLIG 125
>ZFIN|ZDB-GENE-040426-2682 [details] [associations]
symbol:psmb3 "proteasome (prosome, macropain)
subunit, beta type, 3" species:7955 "Danio rerio" [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
ZFIN:ZDB-GENE-040426-2682 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
KO:K09580 GO:GO:0005839 GO:GO:0004298 KO:K02735 CTD:5034
eggNOG:COG0638 MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY
CTD:5691 GeneTree:ENSGT00550000074820 HOVERGEN:HBG004446
OrthoDB:EOG4XH012 HSSP:P33672 RefSeq:NP_998529.3 UniGene:Dr.115460
GeneID:406673 KEGG:dre:406673 EMBL:CU683898 EMBL:BC049010
IPI:IPI00551909 RefSeq:NP_001123295.1 UniGene:Dr.75646 SMR:Q7ZUJ8
STRING:Q7ZUJ8 Ensembl:ENSDART00000022499 GeneID:573095
KEGG:dre:573095 InParanoid:Q7ZUJ8 NextBio:20891038 Uniprot:Q7ZUJ8
Length = 205
Score = 130 (50.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + IASD R + T + K+F + Y + T++
Sbjct: 5 SYNGGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATDVQTVS 64
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+ + + S
Sbjct: 65 QRLKFRLNLYELKEGRQIKPRTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSL 124
Query: 134 DPIG 137
D IG
Sbjct: 125 DLIG 128
Score = 51 (23.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 217 EKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
E + A A +RD +G GV + I KD I R D
Sbjct: 161 EDLFETISQAMLNAVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 205
>TAIR|locus:2204675 [details] [associations]
symbol:PBC2 "20S proteasome beta subunit C2" species:3702
"Arabidopsis thaliana" [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005839
"proteasome core complex" evidence=IEA;TAS] [GO:0008233 "peptidase
activity" evidence=ISS] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0000502
EMBL:AC010704 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02735
eggNOG:COG0638 MEROPS:T01.983 HOGENOM:HOG000090523
ProtClustDB:CLSN2687900 EMBL:AF043533 EMBL:AF385730 EMBL:AY081735
IPI:IPI00530299 PIR:F96803 PIR:T51981 RefSeq:NP_001031294.1
RefSeq:NP_565156.1 UniGene:At.10755 ProteinModelPortal:O81153
SMR:O81153 IntAct:O81153 STRING:O81153 PaxDb:O81153 PRIDE:O81153
EnsemblPlants:AT1G77440.1 EnsemblPlants:AT1G77440.2 GeneID:844080
KEGG:ath:AT1G77440 TAIR:At1g77440 InParanoid:O81153 OMA:SIMAYNG
PhylomeDB:O81153 Genevestigator:O81153 GermOnline:AT1G77440
Uniprot:O81153
Length = 204
Score = 126 (49.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL I T Q SK+ DH + + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF P+ +IAGL + K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFIC 121
Query: 132 SYDPIGHTERA 142
+ D IG E A
Sbjct: 122 TMDSIGAKELA 132
Score = 57 (25.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 207 ENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
E + K + E+ + A ++ +RD +G G H+ +T +KE
Sbjct: 150 EAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKE 196
>UNIPROTKB|O73817 [details] [associations]
symbol:psmb3 "Proteasome subunit beta type-3" species:8022
"Oncorhynchus mykiss" [GO:0005839 "proteasome core complex"
evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
EMBL:AF058707 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 MEROPS:T01.983 HOVERGEN:HBG004446
RefSeq:NP_001117722.1 UniGene:Omy.11891 ProteinModelPortal:O73817
SMR:O73817 PRIDE:O73817 GeneID:100135869 Uniprot:O73817
Length = 205
Score = 129 (50.5 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G IA+D R + T + K+F D Y + T++
Sbjct: 5 SYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVS 64
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E + + + M+S ++Y +RF PYY +IAGLDP+ + + S
Sbjct: 65 QRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSL 124
Query: 134 DPIG 137
D IG
Sbjct: 125 DLIG 128
Score = 51 (23.0 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 217 EKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
E + A A +RD +G GV + I KD I R D
Sbjct: 161 EDLFETISQAMLNAVDRDAVSGMGVVVQVIEKDKITTRTLKARMD 205
>UNIPROTKB|E1BYW9 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type" species:9031
"Gallus gallus" [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02735 OMA:MVSNLLY CTD:5691
GeneTree:ENSGT00550000074820 EMBL:AADN02022225 IPI:IPI00574247
RefSeq:XP_418119.2 UniGene:Gga.1459 Ensembl:ENSGALT00000002423
GeneID:419997 KEGG:gga:419997 NextBio:20822972 Uniprot:E1BYW9
Length = 205
Score = 131 (51.2 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + IASD R + T + K+F + Y + T+
Sbjct: 5 SYNGGAVMAMRGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVA 64
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCVYSY 133
L F++ L+E + + + M+S ++Y +RF PYYT +IAGLDP + + S
Sbjct: 65 QRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPFICSL 124
Query: 134 DPIG 137
D IG
Sbjct: 125 DLIG 128
Score = 47 (21.6 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 223 VKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
+ A A +RD +G GV + I KD I R D
Sbjct: 167 ISQAMLNAVDRDAISGMGVVVHIIEKDKITTRTLKARMD 205
>WB|WBGene00003949 [details] [associations]
symbol:pbs-3 species:6239 "Caenorhabditis elegans"
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0040011 GO:GO:0000003 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02735 EMBL:FO081756 eggNOG:COG0638
MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY
GeneTree:ENSGT00550000074820 PIR:T26649 RefSeq:NP_494913.1
ProteinModelPortal:Q23237 SMR:Q23237 DIP:DIP-25063N IntAct:Q23237
MINT:MINT-211266 STRING:Q23237 PaxDb:Q23237
EnsemblMetazoa:Y38A8.2.1 EnsemblMetazoa:Y38A8.2.2 GeneID:173858
KEGG:cel:CELE_Y38A8.2 UCSC:Y38A8.2.1 CTD:173858 WormBase:Y38A8.2
InParanoid:Q23237 NextBio:881425 Uniprot:Q23237
Length = 204
Score = 128 (50.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 42/125 (33%), Positives = 59/125 (47%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTI---T 77
S GGT VA+AG + IASD R+ +Q K+ H Y L F T
Sbjct: 5 SYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKV--HKVTDKVYVGLAGFQSDART 62
Query: 78 ILP---FQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYS 132
+L F+ L+E N+ + L++MIS + Y RF Y+T ++AGLD K +
Sbjct: 63 VLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICC 122
Query: 133 YDPIG 137
D IG
Sbjct: 123 MDTIG 127
Score = 49 (22.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
R+ A+ + LLG EN + + ++ + + ERD +G G + IT
Sbjct: 133 RDFVAVGTGQEYLLGVC--ENFWRENMKPDELFEATAQSILSCLERDAASGWGAVVYTIT 190
Query: 248 KDGIKEYNFPLRKD 261
KD + R D
Sbjct: 191 KDKVNVSTIKARMD 204
>UNIPROTKB|Q23237 [details] [associations]
symbol:pbs-3 "Proteasome subunit beta type-3" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0040011 GO:GO:0000003 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02735 EMBL:FO081756 eggNOG:COG0638
MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY
GeneTree:ENSGT00550000074820 PIR:T26649 RefSeq:NP_494913.1
ProteinModelPortal:Q23237 SMR:Q23237 DIP:DIP-25063N IntAct:Q23237
MINT:MINT-211266 STRING:Q23237 PaxDb:Q23237
EnsemblMetazoa:Y38A8.2.1 EnsemblMetazoa:Y38A8.2.2 GeneID:173858
KEGG:cel:CELE_Y38A8.2 UCSC:Y38A8.2.1 CTD:173858 WormBase:Y38A8.2
InParanoid:Q23237 NextBio:881425 Uniprot:Q23237
Length = 204
Score = 128 (50.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 42/125 (33%), Positives = 59/125 (47%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTI---T 77
S GGT VA+AG + IASD R+ +Q K+ H Y L F T
Sbjct: 5 SYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKV--HKVTDKVYVGLAGFQSDART 62
Query: 78 ILP---FQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYS 132
+L F+ L+E N+ + L++MIS + Y RF Y+T ++AGLD K +
Sbjct: 63 VLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICC 122
Query: 133 YDPIG 137
D IG
Sbjct: 123 MDTIG 127
Score = 49 (22.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 188 REINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAIT 247
R+ A+ + LLG EN + + ++ + + ERD +G G + IT
Sbjct: 133 RDFVAVGTGQEYLLGVC--ENFWRENMKPDELFEATAQSILSCLERDAASGWGAVVYTIT 190
Query: 248 KDGIKEYNFPLRKD 261
KD + R D
Sbjct: 191 KDKVNVSTIKARMD 204
>TAIR|locus:2036972 [details] [associations]
symbol:PBC1 "proteasome beta subunit C1" species:3702
"Arabidopsis thaliana" [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005839
"proteasome core complex" evidence=IEA;TAS] [GO:0008233 "peptidase
activity" evidence=ISS] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0005774
GO:GO:0000502 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02735
EMBL:AC007727 eggNOG:COG0638 EMBL:Y13173 EMBL:AF043532
EMBL:AY065070 EMBL:AY114628 EMBL:AF344327 EMBL:AK226397
EMBL:AY085532 IPI:IPI00540073 IPI:IPI00542476 PIR:F86350
RefSeq:NP_564149.1 UniGene:At.11467 ProteinModelPortal:Q9XI05
SMR:Q9XI05 STRING:Q9XI05 MEROPS:T01.983 PaxDb:Q9XI05 PRIDE:Q9XI05
EnsemblPlants:AT1G21720.1 GeneID:838776 KEGG:ath:AT1G21720
TAIR:At1g21720 HOGENOM:HOG000090523 InParanoid:Q9XI05 OMA:MVSNLLY
PhylomeDB:Q9XI05 ProtClustDB:CLSN2687900 Genevestigator:Q9XI05
GermOnline:AT1G21720 Uniprot:Q9XI05
Length = 204
Score = 121 (47.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 38/131 (29%), Positives = 60/131 (45%)
Query: 18 SPYSDNGGTTVAVAGPDYAIIASDTRLSAGYN-IYTREQ--SKLFDHYYYRPT---YNFL 71
S + NG VA+ G + IASD RL I T Q SK+ D + + +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQ 61
Query: 72 MIFTITILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVY 131
++ + ++Y + M + A ++S ++Y KRF PY +IAGL + K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFIC 121
Query: 132 SYDPIGHTERA 142
+ D IG E A
Sbjct: 122 TMDSIGAKELA 132
Score = 57 (25.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 207 ENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKE 253
E + K + E+ + A ++ +RD +G G H+ +T IKE
Sbjct: 150 EAMYKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYIVTPTEIKE 196
>CGD|CAL0003796 [details] [associations]
symbol:PUP3 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0019774 "proteasome core complex, beta-subunit complex"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0010499 "proteasomal
ubiquitin-independent protein catabolic process" evidence=IEA]
[GO:0061133 "endopeptidase activator activity" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 CGD:CAL0003796
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 EMBL:AACQ01000187 KO:K02735 HOGENOM:HOG000090523
RefSeq:XP_711676.1 RefSeq:XP_888947.1 ProteinModelPortal:Q59PQ2
SMR:Q59PQ2 STRING:Q59PQ2 GeneID:3646718 GeneID:3703906
KEGG:cal:CaO19.1336 KEGG:cal:CaO19_1336 Uniprot:Q59PQ2
Length = 206
Score = 125 (49.1 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFT 75
P+S NGG VA+ G D IASD RL + K+F D + T + +
Sbjct: 4 PFSINGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVIS 63
Query: 76 IT-ILPFQ--MY-LHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDP-EGKGCV 130
+ + F+ +Y L E + +T LA ++S +Y +RF P++ S I+AGL + K +
Sbjct: 64 LKELFRFKTNLYKLREERNIEPST-LANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFI 122
Query: 131 YSYDPIG 137
+D IG
Sbjct: 123 CGFDSIG 129
Score = 49 (22.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 217 EKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
E + A A +RD +G G + +TKD + + R+D
Sbjct: 162 EDLFETISQALLNAVDRDALSGWGAVVYIVTKDKVIKRVLKTRQD 206
>SGD|S000000896 [details] [associations]
symbol:PUP3 "Beta 3 subunit of the 20S proteasome"
species:4932 "Saccharomyces cerevisiae" [GO:0061133 "endopeptidase
activator activity" evidence=IGI] [GO:0004175 "endopeptidase
activity" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IC] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019774 "proteasome core
complex, beta-subunit complex" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IC] [GO:0034515
"proteasome storage granule" evidence=IC] [GO:0010499 "proteasomal
ubiquitin-independent protein catabolic process" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
SGD:S000000896 GO:GO:0005634 GO:GO:0043161 GO:GO:0005789
EMBL:BK006939 GO:GO:0061133 EMBL:U18839 GO:GO:0010499 PDB:1VSY
PDB:3L5Q PDBsum:1VSY PDBsum:3L5Q GO:GO:0004298 KO:K00948
RefSeq:NP_011025.3 GeneID:856836 KEGG:sce:YER099C
RefSeq:NP_011020.3 GeneID:856830 KEGG:sce:YER094C KO:K02735
GO:GO:0034515 PDB:4G4S PDBsum:4G4S PDB:4B4T PDBsum:4B4T
eggNOG:COG0638 PDB:1FNT PDB:1G0U PDB:1G65 PDB:1JD2 PDB:1RYP
PDB:1Z7Q PDB:2F16 PDB:2FAK PDB:2GPL PDB:2ZCY PDB:3BDM PDB:3D29
PDB:3DY3 PDB:3DY4 PDB:3E47 PDB:3GPJ PDB:3GPT PDB:3GPW PDB:3HYE
PDB:3MG0 PDB:3MG4 PDB:3MG6 PDB:3MG7 PDB:3MG8 PDB:3NZJ PDB:3NZW
PDB:3NZX PDB:3OEU PDB:3OEV PDB:3OKJ PDB:3SDI PDB:3SDK PDB:3SHJ
PDB:3TDD PDB:3UN4 PDB:3UN8 PDB:4FZC PDB:4FZG PDB:4GK7 PDBsum:1FNT
PDBsum:1G0U PDBsum:1G65 PDBsum:1JD2 PDBsum:1RYP PDBsum:1Z7Q
PDBsum:2F16 PDBsum:2FAK PDBsum:2GPL PDBsum:2ZCY PDBsum:3BDM
PDBsum:3D29 PDBsum:3DY3 PDBsum:3DY4 PDBsum:3E47 PDBsum:3GPJ
PDBsum:3GPT PDBsum:3GPW PDBsum:3HYE PDBsum:3MG0 PDBsum:3MG4
PDBsum:3MG6 PDBsum:3MG7 PDBsum:3MG8 PDBsum:3NZJ PDBsum:3NZW
PDBsum:3NZX PDBsum:3OEU PDBsum:3OEV PDBsum:3OKJ PDBsum:3SDI
PDBsum:3SDK PDBsum:3SHJ PDBsum:3TDD PDBsum:3UN4 PDBsum:3UN8
PDBsum:4FZC PDBsum:4FZG PDBsum:4GK7 GO:GO:0019774
HOGENOM:HOG000090523 OMA:MVSNLLY GeneTree:ENSGT00550000074820
OrthoDB:EOG46QB2N EMBL:M88470 PIR:S29251 ProteinModelPortal:P25451
SMR:P25451 DIP:DIP-2039N IntAct:P25451 MINT:MINT-498393
STRING:P25451 PaxDb:P25451 PeptideAtlas:P25451 EnsemblFungi:YER094C
CYGD:YER094c EvolutionaryTrace:P25451 NextBio:983127
Genevestigator:P25451 GermOnline:YER094C Uniprot:P25451
Length = 205
Score = 121 (47.7 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 19 PYSDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD--HYYYRPTYNFLMIFTI 76
P S NGG VA+ G D IA D RL + + + K+F H + T + T+
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDVTTL 63
Query: 77 TIL---PFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE-GKGCVYS 132
+ +Y + + + + +++S +Y +RF PY+ ++AG++ + GK +
Sbjct: 64 NEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAG 123
Query: 133 YDPIGHTERA 142
+D IG + A
Sbjct: 124 FDLIGCIDEA 133
Score = 53 (23.7 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 217 EKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
E + A AA+RD +G G + I KD + + +R+D
Sbjct: 161 EDLFETISQALLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 205
>FB|FBgn0026380 [details] [associations]
symbol:Prosbeta3 "Proteasome beta3 subunit" species:7227
"Drosophila melanogaster" [GO:0005839 "proteasome core complex"
evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS;NAS] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=NAS] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0022008 GO:GO:0006974 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 KO:K02735 eggNOG:COG0638 MEROPS:T01.983 OMA:MVSNLLY
GeneTree:ENSGT00550000074820 EMBL:AF116898 EMBL:AM294562
EMBL:AM294563 EMBL:AM294564 EMBL:AM294565 EMBL:AM294566
EMBL:AM294567 EMBL:AM294568 EMBL:AM294569 EMBL:AY095029
RefSeq:NP_649858.1 UniGene:Dm.6972 ProteinModelPortal:Q9XYN7
SMR:Q9XYN7 DIP:DIP-18901N IntAct:Q9XYN7 MINT:MINT-306832
STRING:Q9XYN7 PaxDb:Q9XYN7 PRIDE:Q9XYN7 EnsemblMetazoa:FBtr0082010
GeneID:41079 KEGG:dme:Dmel_CG11981 CTD:41079 FlyBase:FBgn0026380
InParanoid:Q9XYN7 OrthoDB:EOG48PK28 PhylomeDB:Q9XYN7
GenomeRNAi:41079 NextBio:822046 Bgee:Q9XYN7 GermOnline:CG11981
Uniprot:Q9XYN7
Length = 205
Score = 117 (46.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFT--ITI-- 78
NGG VA+ G D IA+D R + + K+F H R + T +T+
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVF-HIGPRMFLGLTGLQTDILTVRD 65
Query: 79 -LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F+ L+E N+ M + M+S +Y RF PY+ ++AGLDP+
Sbjct: 66 RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPK 115
Score = 53 (23.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 207 ENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKDGIKEYNFPLRKD 261
E + K + ++ V+ + A +RD +G G + I KD I E R D
Sbjct: 151 ETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKITERTLKTRMD 205
>UNIPROTKB|J9NTB8 [details] [associations]
symbol:PSMB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0005839 "proteasome
core complex" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] InterPro:IPR001353
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 OMA:SIMAYNG
GeneTree:ENSGT00550000074820 EMBL:AAEX03008503
Ensembl:ENSCAFT00000004875 Uniprot:J9NTB8
Length = 204
Score = 120 (47.3 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + IA+D R + T + ++F D Y + +
Sbjct: 5 SYNGGAVMAMKGKNCMAIAADRRFGIQAQMVTTD-FQIFPMGDRLYIGLAGLATDVQAVA 63
Query: 78 -ILPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E + + +L M++ ++Y KRF PYYT +I GLDP+ K + S
Sbjct: 64 QCLKFRLNLYELKEGQQIKPYTLMSMVANLLYEKRFGPYYTEPVITGLDPKTFKPFICSL 123
Query: 134 DPIG 137
D IG
Sbjct: 124 DLIG 127
Score = 43 (20.2 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 223 VKDAFTAAAERDIYTGDGVHLCAITKDGI 251
+ A A +RD +G GV + I KD I
Sbjct: 166 ISQAMLNAVDRDAVSGMGVIVHIIEKDKI 194
>RGD|1564425 [details] [associations]
symbol:RGD1564425 "similar to Proteasome subunit beta type 3
(Proteasome theta chain)" species:10116 "Rattus norvegicus"
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR023333 Pfam:PF00227
PROSITE:PS51476 RGD:1564425 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 KO:K02735 GeneTree:ENSGT00550000074820
OrthoDB:EOG4XH012 IPI:IPI00779993 RefSeq:XP_001081206.1
RefSeq:XP_215842.2 Ensembl:ENSRNOT00000058238 GeneID:296169
KEGG:rno:296169 UCSC:RGD:1564425 CTD:296169 NextBio:640734
Uniprot:D3Z8J0
Length = 205
Score = 128 (50.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTI--TI 78
S NGG A G + IA+D + T + K+F YR + + T T+
Sbjct: 5 SYNGGAITATKGKNCVAIAADRHFRIQAQMVTTDFQKIFP-MGYRLYIDLAGLGTDVQTV 63
Query: 79 ---LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYS 132
L F++ L+E + + +L M++ ++Y KRF PYYT +IAGLDP+ K + S
Sbjct: 64 AQHLKFRLNLYELKEGQQIKPYTLLSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICS 123
Query: 133 YDPIG 137
D IG
Sbjct: 124 LDLIG 128
>POMBASE|SPCC63.12c [details] [associations]
symbol:pup3 "20S proteasome complex subunit beta 3, Pup3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0019774 "proteasome core complex, beta-subunit complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004175 "endopeptidase
activity" evidence=ISO] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
PomBase:SPCC63.12c GO:GO:0005829 GO:GO:0005634 GO:GO:0043161
EMBL:CU329672 GO:GO:0004298 KO:K02735 eggNOG:COG0638 GO:GO:0019774
MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY PIR:T41513
RefSeq:NP_587985.1 ProteinModelPortal:Q9Y7T8 SMR:Q9Y7T8
STRING:Q9Y7T8 EnsemblFungi:SPCC63.12c.1 GeneID:2539401
KEGG:spo:SPCC63.12c OrthoDB:EOG46QB2N NextBio:20800565
Uniprot:Q9Y7T8
Length = 204
Score = 121 (47.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 23 NGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPT---YNFLMIFTI 76
NGG+ VA+AG + IASD RL T K+F D Y T + ++ +
Sbjct: 7 NGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDVQTLYEL 66
Query: 77 TILPFQMYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYDPI 136
+Y + + + A ++S +Y KRF PY++ ++AG+ + + +D I
Sbjct: 67 FRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFICGFDSI 126
Query: 137 G 137
G
Sbjct: 127 G 127
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 207 ENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCAITKD 249
E+V + + + + A A +RD +G G + IT D
Sbjct: 150 ESVYEPNLEPDDLFETISQALLNAQDRDCISGWGCVVYVITAD 192
>UNIPROTKB|F1M8Y7 [details] [associations]
symbol:F1M8Y7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 IPI:IPI00392056
Ensembl:ENSRNOT00000034715 OMA:CENIFPL Uniprot:F1M8Y7
Length = 128
Score = 112 (44.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 38/124 (30%), Positives = 58/124 (46%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFD---HYYYRPTYNFLMIFTIT 77
S NGG A+ G + IA+D R + T + K+F Y + T+
Sbjct: 5 SYNGGALKAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGGRLYIGLASLATDVQTVA 64
Query: 78 I-LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEG-KGCVYSY 133
L F++ L+E + M +L M++ ++Y K F YYT +IAGLDP+ K + S
Sbjct: 65 QHLKFRLNLYELKEGRQMKPYTLMSMVANLLYEKWFGLYYTEPVIAGLDPKTFKPFICSL 124
Query: 134 DPIG 137
D G
Sbjct: 125 DLTG 128
>UNIPROTKB|D4GYZ1 [details] [associations]
symbol:psmB "Proteasome subunit beta" species:309800
"Haloferax volcanii DS2" [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0010498 "proteasomal protein catabolic process"
evidence=IDA] [GO:0019774 "proteasome core complex, beta-subunit
complex" evidence=IDA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR019983 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005737 GO:GO:0004175
GO:GO:0010498 GO:GO:0004298 EMBL:CP001956 GenomeReviews:CP001956_GR
GO:GO:0019774 EMBL:AF126262 PIR:T48677 RefSeq:YP_003535609.1
ProteinModelPortal:D4GYZ1 MEROPS:T01.002 PhosSite:P0611175
GeneID:8923965 KEGG:hvo:HVO_1562 HOGENOM:HOG000091083 KO:K03433
OMA:MRRNESM ProtClustDB:CLSK511252 HAMAP:MF_02113_A
TIGRFAMs:TIGR03634 Uniprot:D4GYZ1
Length = 243
Score = 87 (35.7 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 186 LTREINALSSKLTILLGFRNQENVDKTPVPLEKAISVVKDAFTAAAERDIYTGDGVHLCA 245
L E S LG QE D + +E+A V A +A ERD+ +G+G+++
Sbjct: 168 LEEEYTVTGSGSQYALGVLEQEFEDG--LSIEEAKGVATKAIRSAVERDLASGNGINIAV 225
Query: 246 ITKDGI 251
+T+DG+
Sbjct: 226 VTEDGV 231
Score = 81 (33.6 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 24 GGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLFDHYYYRPTYNFLMIFTITI----- 78
G TTV + + ++A+D R S GY + +++ K+ + + PT + +++
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIH---PTGALTIAGSVSAAQSLI 105
Query: 79 --LPFQMYLHE--HNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPEGKGCVYSYD 134
L ++ L+E + MS +L+ ++ + F Y I+ G+D G +YS D
Sbjct: 106 SSLRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETGPH-IYSID 162
Query: 135 PIG 137
P G
Sbjct: 163 PAG 165
>UNIPROTKB|F1LWQ7 [details] [associations]
symbol:F1LWQ7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 GeneTree:ENSGT00550000074820
IPI:IPI00560877 Ensembl:ENSRNOT00000032067 Uniprot:F1LWQ7
Length = 191
Score = 119 (46.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 21 SDNGGTTVAVAGPDYAIIASDTRLSAGYNIYTREQSKLF---DHYYYRPTYNFLMIFTIT 77
S NGG +A+ G + +IA+D + T + K+F D Y I T+
Sbjct: 5 SYNGGAVMAMKGKNCVVIAADRCFGIQAQMVTTDFQKIFSMGDRLYIGLASLATDIQTVA 64
Query: 78 I-LPFQ-MYLHEHNKVMSTTSLAKMISIMMYGKRFFPYYTSTIIAGLDPE 125
L F+ +Y + + + +L M++ ++Y K F PYYT +IAGLDP+
Sbjct: 65 QRLKFRNLYELKEGRQIKPYTLLSMVANLLYEKWFGPYYTEPVIAGLDPK 114
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 261 248 0.00079 114 3 11 22 0.42 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 578 (61 KB)
Total size of DFA: 174 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.25u 0.08s 19.33t Elapsed: 00:00:05
Total cpu time: 19.26u 0.08s 19.34t Elapsed: 00:00:05
Start: Thu Aug 15 16:07:14 2013 End: Thu Aug 15 16:07:19 2013