Query psy10327
Match_columns 289
No_of_seqs 342 out of 2696
Neff 7.8
Searched_HMMs 46136
Date Fri Aug 16 15:09:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10327.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10327hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0111|consensus 100.0 1.5E-52 3.2E-57 352.8 10.1 224 64-289 9-256 (298)
2 KOG0546|consensus 100.0 2.1E-43 4.5E-48 318.0 11.2 122 168-289 7-136 (372)
3 KOG0880|consensus 100.0 9.1E-42 2E-46 283.3 13.0 127 163-289 33-160 (217)
4 KOG0546|consensus 100.0 3.8E-42 8.2E-47 309.8 7.8 126 1-126 13-160 (372)
5 KOG0880|consensus 100.0 2.8E-40 6E-45 274.5 7.7 130 1-130 44-190 (217)
6 KOG0879|consensus 100.0 3.7E-38 8.1E-43 246.7 9.3 125 165-289 6-135 (177)
7 KOG0881|consensus 100.0 8.8E-38 1.9E-42 241.9 7.2 118 163-289 3-121 (164)
8 KOG0882|consensus 100.0 1E-36 2.2E-41 279.8 9.2 116 170-289 400-516 (558)
9 COG0652 PpiB Peptidyl-prolyl c 100.0 5.9E-36 1.3E-40 246.3 10.5 105 179-289 4-111 (158)
10 KOG0879|consensus 100.0 6.2E-36 1.4E-40 234.2 6.3 126 1-126 15-159 (177)
11 cd01926 cyclophilin_ABH_like c 100.0 2E-34 4.3E-39 241.8 14.7 119 170-289 1-125 (164)
12 COG0652 PpiB Peptidyl-prolyl c 100.0 1.9E-35 4E-40 243.4 7.6 119 5-126 3-135 (158)
13 KOG0881|consensus 100.0 5.5E-36 1.2E-40 231.9 4.0 117 7-126 15-145 (164)
14 PTZ00060 cyclophilin; Provisio 100.0 7.4E-34 1.6E-38 242.1 14.8 125 164-289 10-141 (183)
15 PLN03149 peptidyl-prolyl isome 100.0 9.8E-34 2.1E-38 241.7 14.0 127 163-289 12-143 (186)
16 KOG0111|consensus 100.0 5.5E-35 1.2E-39 246.5 5.0 124 1-124 141-278 (298)
17 PTZ00221 cyclophilin; Provisio 100.0 1.1E-32 2.3E-37 242.9 14.7 120 166-289 49-177 (249)
18 cd01927 cyclophilin_WD40 cyclo 100.0 3.1E-32 6.8E-37 224.7 11.6 106 180-289 3-109 (148)
19 KOG0883|consensus 100.0 7.8E-33 1.7E-37 249.8 8.0 105 181-289 284-389 (518)
20 cd01922 cyclophilin_SpCYP2_lik 100.0 7E-32 1.5E-36 222.1 11.5 106 180-289 3-109 (146)
21 cd01928 Cyclophilin_PPIL3_like 100.0 1.3E-31 2.9E-36 222.1 12.6 105 181-289 7-112 (153)
22 KOG0884|consensus 100.0 3.1E-32 6.7E-37 209.9 7.9 105 181-289 7-112 (161)
23 cd01923 cyclophilin_RING cyclo 100.0 2.5E-31 5.5E-36 221.8 12.7 105 181-289 6-111 (159)
24 cd01925 cyclophilin_CeCYP16-li 100.0 3.5E-31 7.5E-36 223.5 13.3 111 170-289 6-117 (171)
25 PTZ00221 cyclophilin; Provisio 100.0 1.3E-31 2.7E-36 236.1 9.3 125 1-126 57-201 (249)
26 cd01926 cyclophilin_ABH_like c 100.0 1.9E-31 4.1E-36 223.8 9.1 125 1-126 5-149 (164)
27 cd01927 cyclophilin_WD40 cyclo 100.0 1.9E-31 4.2E-36 220.0 8.0 117 7-126 3-133 (148)
28 KOG0882|consensus 100.0 9.2E-32 2E-36 247.2 5.3 120 4-126 407-540 (558)
29 PRK10903 peptidyl-prolyl cis-t 100.0 2.3E-30 4.9E-35 221.6 13.3 114 165-289 24-138 (190)
30 cd01922 cyclophilin_SpCYP2_lik 100.0 4.4E-31 9.6E-36 217.3 8.1 117 7-126 3-133 (146)
31 PTZ00060 cyclophilin; Provisio 100.0 6.2E-31 1.3E-35 224.1 9.1 124 1-125 20-164 (183)
32 PLN03149 peptidyl-prolyl isome 100.0 5.3E-31 1.1E-35 224.9 8.3 126 1-126 23-168 (186)
33 cd01928 Cyclophilin_PPIL3_like 100.0 1.2E-30 2.5E-35 216.4 8.6 117 7-126 6-136 (153)
34 cd01921 cyclophilin_RRM cyclop 100.0 4.3E-30 9.2E-35 215.9 11.5 106 180-289 3-117 (166)
35 cd01923 cyclophilin_RING cyclo 100.0 2.2E-30 4.7E-35 216.2 8.5 117 7-126 5-135 (159)
36 cd01920 cyclophilin_EcCYP_like 100.0 7.7E-30 1.7E-34 212.0 11.5 103 181-289 4-107 (155)
37 KOG0885|consensus 100.0 2.4E-30 5.3E-35 232.8 8.6 112 169-289 12-124 (439)
38 KOG0865|consensus 100.0 3E-30 6.4E-35 214.1 7.8 122 168-289 2-126 (167)
39 PRK10791 peptidyl-prolyl cis-t 100.0 1.5E-29 3.3E-34 211.8 12.1 103 181-289 6-109 (164)
40 KOG0883|consensus 100.0 1E-30 2.3E-35 236.1 3.2 116 8-126 284-413 (518)
41 cd01921 cyclophilin_RRM cyclop 100.0 1.6E-29 3.5E-34 212.4 8.1 117 7-126 3-141 (166)
42 cd01924 cyclophilin_TLP40_like 100.0 7.5E-29 1.6E-33 209.9 11.4 107 180-289 3-143 (176)
43 cd01920 cyclophilin_EcCYP_like 100.0 2.8E-29 6.1E-34 208.6 7.8 117 7-126 3-136 (155)
44 KOG0884|consensus 100.0 3.3E-29 7.3E-34 193.1 5.5 116 8-126 7-136 (161)
45 PRK10903 peptidyl-prolyl cis-t 100.0 8.9E-29 1.9E-33 211.7 8.5 117 7-126 34-167 (190)
46 PRK10791 peptidyl-prolyl cis-t 100.0 1.1E-28 2.3E-33 206.7 7.9 117 7-126 5-141 (164)
47 cd01924 cyclophilin_TLP40_like 100.0 1.4E-28 3.1E-33 208.2 8.1 115 7-124 3-165 (176)
48 cd01925 cyclophilin_CeCYP16-li 100.0 2.5E-28 5.3E-33 206.1 8.7 117 7-126 11-142 (171)
49 KOG0865|consensus 99.9 2E-28 4.4E-33 203.2 4.8 123 1-123 8-147 (167)
50 cd00317 cyclophilin cyclophili 99.9 1.4E-26 3E-31 190.6 11.6 104 181-289 4-108 (146)
51 KOG0885|consensus 99.9 2.6E-27 5.5E-32 213.4 6.3 112 6-121 17-144 (439)
52 cd00317 cyclophilin cyclophili 99.9 1.8E-26 3.9E-31 189.9 8.3 117 7-126 3-132 (146)
53 PF00160 Pro_isomerase: Cyclop 99.9 4E-26 8.6E-31 189.6 7.3 121 1-126 2-140 (155)
54 PF00160 Pro_isomerase: Cyclop 99.9 3.7E-25 8E-30 183.8 12.3 112 173-289 1-116 (155)
55 KOG0415|consensus 99.9 3.6E-24 7.9E-29 191.9 9.6 106 180-289 6-120 (479)
56 KOG0415|consensus 99.9 5.2E-23 1.1E-27 184.5 4.2 115 6-123 5-141 (479)
57 TIGR03268 methan_mark_3 putati 97.6 0.0019 4.1E-08 62.1 14.5 98 9-123 199-303 (503)
58 PRK00969 hypothetical protein; 97.5 0.0029 6.4E-08 60.9 14.6 98 9-123 202-306 (508)
59 COG4070 Predicted peptidyl-pro 96.7 0.0052 1.1E-07 57.3 7.1 93 9-121 201-303 (512)
60 TIGR03268 methan_mark_3 putati 96.4 0.0069 1.5E-07 58.3 6.0 101 12-125 376-497 (503)
61 PRK00969 hypothetical protein; 95.6 0.45 9.7E-06 46.3 14.3 216 7-284 56-281 (508)
62 COG4070 Predicted peptidyl-pro 94.4 0.07 1.5E-06 50.0 5.1 22 12-33 377-398 (512)
63 PF12903 DUF3830: Protein of u 65.5 7.8 0.00017 31.8 3.4 23 11-33 8-30 (147)
64 PF12903 DUF3830: Protein of u 53.3 14 0.0003 30.4 2.9 42 185-232 9-52 (147)
65 PF06138 Chordopox_E11: Chordo 29.2 2.7E+02 0.0059 22.3 6.5 48 171-225 5-61 (130)
No 1
>KOG0111|consensus
Probab=100.00 E-value=1.5e-52 Score=352.79 Aligned_cols=224 Identities=67% Similarity=1.136 Sum_probs=205.5
Q ss_pred CCcccCCCCCccccchhhhhcccCCCCCeEEecCCCCCCCCCCC------------------------ccceEEEecccc
Q psy10327 64 KSRFSNLGGLAEEVDDKVLNAAFIPFGDLVDIQMPLDYETEKHQ------------------------LFGRIIRVNLAK 119 (289)
Q Consensus 64 ~g~~~~~~~~~~e~~~g~~~~~~~~~Gs~fii~~~~p~ldg~~~------------------------vFG~Vi~mdvv~ 119 (289)
..+.+|.+.+.+|.+..+||.||+|+|.+..|..|+++-.++|. +|||+|.++.++
T Consensus 9 ~KrtlYVGGladeVtekvLhaAFIPFGDI~dIqiPlDyesqkHRgFgFVefe~aEDAaaAiDNMnesEL~GrtirVN~Ak 88 (298)
T KOG0111|consen 9 QKRTLYVGGLADEVTEKVLHAAFIPFGDIKDIQIPLDYESQKHRGFGFVEFEEAEDAAAAIDNMNESELFGRTIRVNLAK 88 (298)
T ss_pred cceeEEeccchHHHHHHHHHhccccccchhhcccccchhcccccceeEEEeeccchhHHHhhcCchhhhcceeEEEeecC
Confidence 35678999999999999999999999999999999988888887 899999999999
Q ss_pred CcccccCCCcccccchhhhhhccCCCCCCCCCCChhhhhhccCCCCCCCCCeEEEEEEECcEEeeEEEEEEecCCCchhH
Q psy10327 120 PQKVQQTSSKPVWASDTWLQKHAGETLDPENQIDPAEKLAASIDPKTKKNPQVYMDIKIGKQEVGRITIQLRYDLVPRTA 199 (289)
Q Consensus 120 ~i~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~ 199 (289)
..++++++.+|+|.|++||++++. ++.++..+++..++.++- ..++.+|+||++++|.+...|+|+++|..|..|+|+
T Consensus 89 P~kikegsqkPvWADDdWlkk~~g-~~q~E~e~eaeK~et~s~-kaa~~~pqv~~~ikig~~~~Gri~~~lrtdv~Pmta 166 (298)
T KOG0111|consen 89 PEKIKEGSQKPVWADDDWLKKQQG-EAQAEKEIEAEKAETESK-KAAMENPQVYHDIKIGEDRAGRIVMLLRTDVVPMTA 166 (298)
T ss_pred CccccCCCCCCcccCcHHHHHhcc-ccccccccchhhhcCccc-hhhhhChHhhhheeecccccceEEEeecccCChhhh
Confidence 999999999999999999999994 333555555444433322 466889999999999999999999999999999999
Q ss_pred HHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCCCCCcCCCCCCCCcEEEEecCCCCCCCceEE
Q psy10327 200 ENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTNGSQFF 279 (289)
Q Consensus 200 ~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~~~e~~~~~~~~~G~v~ma~~~~~s~~sqFf 279 (289)
+||..||+|++||+|+|++||||||.||+||||++.++|+||.|+||.+|.||++.|+|+.+|+|||||+|+|+||||||
T Consensus 167 enfr~Lctge~gfgykgssfhriip~fmcqggdftn~ngtggksiygkkfddenf~lkht~pgtlsmansgantngsqff 246 (298)
T KOG0111|consen 167 ENFRCLCTGEAGFGYKGSSFHRIIPKFMCQGGDFTNGNGTGGKSIYGKKFDDENFTLKHTMPGTLSMANSGANTNGSQFF 246 (298)
T ss_pred hhhhhhccccCccCccccchhhhhhhhhccCCccccCCCCCCcccccccccccceeeecCCCceeeccccCCCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCC
Q psy10327 280 LCTTKTEWNI 289 (289)
Q Consensus 280 I~l~~~~~LD 289 (289)
||+....|||
T Consensus 247 ict~ktdwld 256 (298)
T KOG0111|consen 247 ICTEKTDWLD 256 (298)
T ss_pred EEeccccccc
Confidence 9999999998
No 2
>KOG0546|consensus
Probab=100.00 E-value=2.1e-43 Score=318.00 Aligned_cols=122 Identities=62% Similarity=1.012 Sum_probs=119.5
Q ss_pred CCCeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccCCc--------cccCCceEEEecCcEEEeCCCCCCCCC
Q psy10327 168 KNPQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGF--------GYQGSSFHRIIPDFMCQGGDFTNHNGT 239 (289)
Q Consensus 168 ~~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~--------~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~ 239 (289)
.+|+|||||+|++.+.|+|+||||.|.||+||+||+.||+|++|. +|+|+.|||||++|||||||++.++|+
T Consensus 7 ~~pr~ffDISI~ge~~GRIvfeLf~dv~PKTaENFraLCtGE~G~~~~~gk~L~YKG~~FHRViK~FMiQgGDfs~gnGt 86 (372)
T KOG0546|consen 7 TNPRVFFDISIGGEPAGRIVFELFNDVVPKTAENFRALCTGEKGGGLTTGKPLHYKGSRFHRVIKNFMIQGGDFSEGNGT 86 (372)
T ss_pred CCceEEEEEEeCCcccceEEEEeecccCchhHHHHHHHhccccCCCCCCCCeeeecCchhheeeecceeeccccccCCCC
Confidence 689999999999999999999999999999999999999999874 599999999999999999999999999
Q ss_pred CCcccCCCCCCCCcCCCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 240 GGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 240 ~~~~~~~~~~~~e~~~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
||.||||..|+||+|.++|+++++|||||.||||||||||||+.++||||
T Consensus 87 GGeSIYG~~FdDEnF~lKHdrpflLSMAN~GpNTNgSQFFITT~p~PHLd 136 (372)
T KOG0546|consen 87 GGESIYGEKFDDENFELKHDRPFLLSMANRGPNTNGSQFFITTVPTPHLD 136 (372)
T ss_pred CcccccccccccccceeccCcchhhhhhcCCCCCCCcceEEeCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999998
No 3
>KOG0880|consensus
Probab=100.00 E-value=9.1e-42 Score=283.34 Aligned_cols=127 Identities=64% Similarity=1.072 Sum_probs=124.5
Q ss_pred CCCCCCCCeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhh-ccCCccccCCceEEEecCcEEEeCCCCCCCCCCC
Q psy10327 163 DPKTKKNPQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCT-HEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGG 241 (289)
Q Consensus 163 ~~~~~~~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~-g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~ 241 (289)
.|.++.+.+|||||.+.+...|+|+|+||+..+|+||+||..||+ +.++++|.+++||||+|+|||||||++.++|+|+
T Consensus 33 ~~~p~vT~kV~fdi~~g~~~~grIvigLfG~~vPKTV~NF~~l~~~~~~~~gY~gS~FhRVi~nfmIQGGd~t~g~gtGg 112 (217)
T KOG0880|consen 33 EPGPKVTHKVYFDIEIGGEPVGRIVIGLFGKVVPKTVENFRALATSGEKGYGYKGSKFHRVIPNFMIQGGDFTKGDGTGG 112 (217)
T ss_pred CCCCcceeEEEEEEEECCEeccEEEEEeccccchHHHHHHHHHHccCCCCcccCCceeeeeecCceeecCccccCCCCCC
Confidence 678889999999999999999999999999999999999999999 8899999999999999999999999999999999
Q ss_pred cccCCCCCCCCcCCCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 242 KSIYGNKFEDENFILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 242 ~~~~~~~~~~e~~~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
.++||..|+||++.++|+++|.|||||.|||+||||||||+...||||
T Consensus 113 ~SIyG~~F~DENf~LkH~rpG~lSMAn~GpDtNGsQFfItT~~t~wLD 160 (217)
T KOG0880|consen 113 KSIYGEKFPDENFKLKHDRPGRLSMANAGPDTNGSQFFITTVKTPWLD 160 (217)
T ss_pred eEeecCCCCCccceeecCCCceEeeeccCCCCCCceEEEEecCCcccc
Confidence 999999999999999999999999999999999999999999999998
No 4
>KOG0546|consensus
Probab=100.00 E-value=3.8e-42 Score=309.83 Aligned_cols=126 Identities=33% Similarity=0.474 Sum_probs=115.7
Q ss_pred CceeeCceeeeEEEEEEcCCCChHHHHHHHHhhccCCCc--------ccCCCeeeeecccceecccccccc---CCcccC
Q psy10327 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGF--------GYQGSSFHRIIPDFVSFMTKHQSL---KSRFSN 69 (289)
Q Consensus 1 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~--------~Y~g~~f~rv~~~~~iq~Gd~~~~---~g~~~~ 69 (289)
|||+|++.+.|||+||||.|.||+||+||++||||+.|. +|+|+.|||||++|||||||++.+ ||+|||
T Consensus 13 fDISI~ge~~GRIvfeLf~dv~PKTaENFraLCtGE~G~~~~~gk~L~YKG~~FHRViK~FMiQgGDfs~gnGtGGeSIY 92 (372)
T KOG0546|consen 13 FDISIGGEPAGRIVFELFNDVVPKTAENFRALCTGEKGGGLTTGKPLHYKGSRFHRVIKNFMIQGGDFSEGNGTGGESIY 92 (372)
T ss_pred EEEEeCCcccceEEEEeecccCchhHHHHHHHhccccCCCCCCCCeeeecCchhheeeecceeeccccccCCCCCccccc
Confidence 799999999999999999999999999999999999984 499999999999999999999854 589999
Q ss_pred CCCCcccc------chhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 70 LGGLAEEV------DDKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 70 ~~~~~~e~------~~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
|+.|+||+ .+++|+||+ .+||| |||++.|+|||||+|+|||+||+ +.||+.|+....
T Consensus 93 G~~FdDEnF~lKHdrpflLSMAN~GpNTNgSQFFITT~p~PHLdGkHVVFGqVI~G~~VVr~IEn~~~ 160 (372)
T KOG0546|consen 93 GEKFDDENFELKHDRPFLLSMANRGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGKEVVREIENLET 160 (372)
T ss_pred ccccccccceeccCcchhhhhhcCCCCCCCcceEEeCCCCCCcCCceeEEeeEeechhHHHHHhcccc
Confidence 99999998 379999994 67898 66777899999999999999998 999999987444
No 5
>KOG0880|consensus
Probab=100.00 E-value=2.8e-40 Score=274.50 Aligned_cols=130 Identities=33% Similarity=0.515 Sum_probs=118.5
Q ss_pred CceeeCceeeeEEEEEEcCCCChHHHHHHHHhhc-cCCCcccCCCeeeeecccceecccccccc---CCcccCCCCCccc
Q psy10327 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCT-HEKGFGYQGSSFHRIIPDFVSFMTKHQSL---KSRFSNLGGLAEE 76 (289)
Q Consensus 1 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~-g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~---~g~~~~~~~~~~e 76 (289)
|||.++++..|||+|+||++.+|+||+||++||+ ++++++|++++||||+|+|||||||++.+ +|.||||+.|+||
T Consensus 44 fdi~~g~~~~grIvigLfG~~vPKTV~NF~~l~~~~~~~~gY~gS~FhRVi~nfmIQGGd~t~g~gtGg~SIyG~~F~DE 123 (217)
T KOG0880|consen 44 FDIEIGGEPVGRIVIGLFGKVVPKTVENFRALATSGEKGYGYKGSKFHRVIPNFMIQGGDFTKGDGTGGKSIYGEKFPDE 123 (217)
T ss_pred EEEEECCEeccEEEEEeccccchHHHHHHHHHHccCCCCcccCCceeeeeecCceeecCccccCCCCCCeEeecCCCCCc
Confidence 7999999999999999999999999999999998 89999999999999999999999999865 5799999999999
Q ss_pred c------chhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC--CCcc
Q psy10327 77 V------DDKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT--SSKP 130 (289)
Q Consensus 77 ~------~~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~--~~~~ 130 (289)
+ .+|.++||+ .+||| |||++...|||||+|+|||||++ ||+|.+|+..+. ..+|
T Consensus 124 Nf~LkH~rpG~lSMAn~GpDtNGsQFfItT~~t~wLDGkhVVFGqVl~Gmdvv~~Ie~~~TD~~dkP 190 (217)
T KOG0880|consen 124 NFKLKHDRPGRLSMANAGPDTNGSQFFITTVKTPWLDGKHVVFGQVLEGMDVVRKIENVKTDERDKP 190 (217)
T ss_pred cceeecCCCceEeeeccCCCCCCceEEEEecCCccccCceeEEeeehhhHHHHHHHHhcccCCCCCc
Confidence 8 379999996 78999 55557789999999999999998 999999987655 3444
No 6
>KOG0879|consensus
Probab=100.00 E-value=3.7e-38 Score=246.71 Aligned_cols=125 Identities=57% Similarity=0.987 Sum_probs=119.2
Q ss_pred CCCCCCeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccC-----CccccCCceEEEecCcEEEeCCCCCCCCC
Q psy10327 165 KTKKNPQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEK-----GFGYQGSSFHRIIPDFMCQGGDFTNHNGT 239 (289)
Q Consensus 165 ~~~~~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~-----g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~ 239 (289)
++..+|.|||||++++.+.|+|+||||.|.+|+|++||++.|+|+- ..+|+++.|||||++|||||||+..++|+
T Consensus 6 r~~~nPvVF~dv~igg~~~GrikieLFadivPkTAENFRQFCTGE~r~~g~PiGYK~~tFHRvIkdFMiQgGDFv~gDGt 85 (177)
T KOG0879|consen 6 RSPNNPVVFFDVAIGGRPIGRIKIELFADIVPKTAENFRQFCTGEYRKDGVPIGYKNSTFHRVIKDFMIQGGDFVNGDGT 85 (177)
T ss_pred cCCCCCeEEEEEeeCCEEcceEEEEEeeccChhhHHHHHhhcccccccCCccccccccchHHHhhhheeccCceecCCCc
Confidence 4456999999999999999999999999999999999999999863 24699999999999999999999999999
Q ss_pred CCcccCCCCCCCCcCCCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 240 GGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 240 ~~~~~~~~~~~~e~~~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
|-.++|+..|+||++.++|+.+|+|||||+|+++||+|||||..++.|||
T Consensus 86 G~~sIy~~~F~DENFtlkH~~PGlLSMANsG~~tNGCQFFITcakcdfLD 135 (177)
T KOG0879|consen 86 GVASIYGSTFPDENFTLKHDGPGLLSMANSGKDTNGCQFFITCAKCDFLD 135 (177)
T ss_pred eEEEEcCCCCCCcceeeecCCCceeeccccCCCCCCceEEEEeccccccc
Confidence 99999999999999999999999999999999999999999999999998
No 7
>KOG0881|consensus
Probab=100.00 E-value=8.8e-38 Score=241.91 Aligned_cols=118 Identities=54% Similarity=0.932 Sum_probs=110.0
Q ss_pred CCCCCCCCeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCc
Q psy10327 163 DPKTKKNPQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGK 242 (289)
Q Consensus 163 ~~~~~~~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~ 242 (289)
+|..-.-+.|+++ |++|.|++|||-+.||+||.||..|+ +.|| |+|+.||||+++||||||||+ ++|.||.
T Consensus 3 ~~~~~q~~~V~Le-----TsmG~i~~ElY~kHaP~TC~NF~eLa--rrgY-Yn~v~FHRii~DFmiQGGDPT-GTGRGGa 73 (164)
T KOG0881|consen 3 APPEWQPPNVTLE-----TSMGKITLELYWKHAPRTCQNFAELA--RRGY-YNGVIFHRIIKDFMIQGGDPT-GTGRGGA 73 (164)
T ss_pred CCccCCCCeEEEe-----ecccceehhhhhhcCcHHHHHHHHHH--hccc-ccceeeeehhhhheeecCCCC-CCCCCcc
Confidence 3444556678888 99999999999999999999999999 8999 999999999999999999997 6899999
Q ss_pred ccCCCCCCCCcC-CCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 243 SIYGNKFEDENF-ILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 243 ~~~~~~~~~e~~-~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
|+||.+|+||.. .++|...|.|||||.|||+|+|||||||.+.+|||
T Consensus 74 SIYG~kF~DEi~~dLkhTGAGILsMANaGPnTNgSQFFiTLAPt~~LD 121 (164)
T KOG0881|consen 74 SIYGDKFEDEIHSDLKHTGAGILSMANAGPNTNGSQFFITLAPTQWLD 121 (164)
T ss_pred ccccchhhhhhhhhhcccchhhhhhhccCCCCCCceEEEEecCccccC
Confidence 999999999954 79999999999999999999999999999999998
No 8
>KOG0882|consensus
Probab=100.00 E-value=1e-36 Score=279.79 Aligned_cols=116 Identities=46% Similarity=0.721 Sum_probs=107.5
Q ss_pred CeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCC
Q psy10327 170 PQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKF 249 (289)
Q Consensus 170 ~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~ 249 (289)
+++.=+-+|..|+.|+|.|.||++.||+||+||...| +.|| |||..|||||++||||+|||. ++|+||.|+||..|
T Consensus 400 ~~~l~~~aiihtt~gdi~~kl~p~ecpktvenf~th~--rngy-y~~~~fhriik~fmiqtgdp~-g~gtggesiwg~df 475 (558)
T KOG0882|consen 400 NKLLGKAAIIHTTQGDIHIKLYPEECPKTVENFTTHS--RNGY-YDNHTFHRIIKGFMIQTGDPL-GDGTGGESIWGKDF 475 (558)
T ss_pred ceecccceEEEecccceEEEecccccchhhhhhhccc--cCcc-ccCcchHHhhhhheeecCCCC-CCCCCCcccccccc
Confidence 3344444555699999999999999999999999999 8999 999999999999999999997 79999999999999
Q ss_pred CCCcC-CCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 250 EDENF-ILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 250 ~~e~~-~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
+||.. .|+|+++-+|||||.|||+||||||||+.++||||
T Consensus 476 edefh~~lrhdrpft~smanag~ntngsqffit~~~tpwld 516 (558)
T KOG0882|consen 476 EDEFHPNLRHDRPFTVSMANAGPNTNGSQFFITTVPTPWLD 516 (558)
T ss_pred hhhcCcccccCCCceEEecccCCCCCCceEEEEecCccccC
Confidence 99965 79999999999999999999999999999999998
No 9
>COG0652 PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.9e-36 Score=246.32 Aligned_cols=105 Identities=49% Similarity=0.798 Sum_probs=97.9
Q ss_pred CcEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCCCCCcCCCCC
Q psy10327 179 GKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKFEDENFILKH 258 (289)
Q Consensus 179 ~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~~~e~~~~~~ 258 (289)
..|+.|+|+||||++.||+||+||++|| +.|| |+|+.||||+|+||||||||..+.+.++.+ .+|++|++...|
T Consensus 4 ~~t~~G~I~ieL~~~~aP~Tv~NF~~l~--~~g~-Ydg~~FHRVi~~FmiQgGd~~~~~g~gg~~---~~f~~E~~~~~~ 77 (158)
T COG0652 4 LETNKGDITIELYPDKAPKTVANFLQLV--KEGF-YDGTIFHRVIPGFMIQGGDPTGGDGTGGPG---PPFKDENFALNG 77 (158)
T ss_pred eeccCCCEEEEECCCcCcHHHHHHHHHH--HcCC-CCCceEEEeecCceeecCCCCCCCCCCCCC---CCCccccccccc
Confidence 3499999999999999999999999999 7999 999999999999999999998776777774 689999888878
Q ss_pred CC--CcEEEEecCC-CCCCCceEEEEcCCCCCCC
Q psy10327 259 TG--PGVLSMANSG-PNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 259 ~~--~G~v~ma~~~-~~s~~sqFfI~l~~~~~LD 289 (289)
++ +|+|||||++ ||||+||||||+.++||||
T Consensus 78 ~~~~~G~lsMA~~g~P~t~~SQFFI~~~~~~~Ld 111 (158)
T COG0652 78 DRHKRGTLSMARAGDPNSNGSQFFITVVDNPFLD 111 (158)
T ss_pred ccCCcceEeEcccCCcCCccCeEEEEecCCcccC
Confidence 77 9999999999 9999999999999999998
No 10
>KOG0879|consensus
Probab=100.00 E-value=6.2e-36 Score=234.21 Aligned_cols=126 Identities=32% Similarity=0.466 Sum_probs=113.6
Q ss_pred CceeeCceeeeEEEEEEcCCCChHHHHHHHHhhccCCC-----cccCCCeeeeecccceeccccccccCC---cccCCCC
Q psy10327 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKG-----FGYQGSSFHRIIPDFVSFMTKHQSLKS---RFSNLGG 72 (289)
Q Consensus 1 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g-----~~Y~g~~f~rv~~~~~iq~Gd~~~~~g---~~~~~~~ 72 (289)
|||+|++.+.|||.||||.|.+|+|+|||+++|||+.. .+|+++.|||||++|||||||+..++| .|||+..
T Consensus 15 ~dv~igg~~~GrikieLFadivPkTAENFRQFCTGE~r~~g~PiGYK~~tFHRvIkdFMiQgGDFv~gDGtG~~sIy~~~ 94 (177)
T KOG0879|consen 15 FDVAIGGRPIGRIKIELFADIVPKTAENFRQFCTGEYRKDGVPIGYKNSTFHRVIKDFMIQGGDFVNGDGTGVASIYGST 94 (177)
T ss_pred EEEeeCCEEcceEEEEEeeccChhhHHHHHhhcccccccCCccccccccchHHHhhhheeccCceecCCCceEEEEcCCC
Confidence 79999999999999999999999999999999999753 469999999999999999999887654 7899999
Q ss_pred Ccccc------chhhhhcccC---CCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 73 LAEEV------DDKVLNAAFI---PFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 73 ~~~e~------~~g~~~~~~~---~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
|+||+ .+|+++||+. +||- |||+..+.+||||||+|||||++ |.++++|+..+.
T Consensus 95 F~DENFtlkH~~PGlLSMANsG~~tNGCQFFITcakcdfLD~KHVVFGrvldGlli~rkIEnvp~ 159 (177)
T KOG0879|consen 95 FPDENFTLKHDGPGLLSMANSGKDTNGCQFFITCAKCDFLDGKHVVFGRVLDGLLIMRKIENVPT 159 (177)
T ss_pred CCCcceeeecCCCceeeccccCCCCCCceEEEEecccccccCceEEEeeeehhhhhhhhhhcCCC
Confidence 99998 3799999964 6776 66667789999999999999998 999999998665
No 11
>cd01926 cyclophilin_ABH_like cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. These enzymes have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. As cyclophilins, Human hCyP-A, human cyclophilin-B (hCyP-19), S. cerevisiae Cpr1 and C. elegans Cyp-3, are inhibited by the immunosuppressive drug cyclopsporin A (CsA). CsA binds to the PPIase active site. Cyp-3. S. cerevisiae Cpr1 interacts with the Rpd3 - Sin3 complex and in addition is a component of the Set3 complex. S. cerevisiae Cpr1 has also been shown to have a role in Zpr1p nuclear transport. Human cyclophilin H associates with the [U4/U6.U5] tri-snRNP particles of the spl
Probab=100.00 E-value=2e-34 Score=241.83 Aligned_cols=119 Identities=71% Similarity=1.184 Sum_probs=112.4
Q ss_pred CeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccCC------ccccCCceEEEecCcEEEeCCCCCCCCCCCcc
Q psy10327 170 PQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKG------FGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKS 243 (289)
Q Consensus 170 ~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g------~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~ 243 (289)
|+|||||++++++.|+|+||||.+.||++|+||++||++.++ + |+++.||||+|+|+||+||+..++++++.+
T Consensus 1 p~v~~di~i~~~~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~~~~~~-Y~~~~f~Rv~~~~~iq~Gd~~~~~g~~~~~ 79 (164)
T cd01926 1 PKVFFDITIGGEPAGRIVMELFADVVPKTAENFRALCTGEKGKGGKPFG-YKGSTFHRVIPDFMIQGGDFTRGNGTGGKS 79 (164)
T ss_pred CEEEEEEeECCeeceeEEEEEeCCCCCHHHHHHHHHhcccCCCcccccc-cCCCEEEEEeCCcEEEcCCccCCCCCCCCc
Confidence 679999999999999999999999999999999999976566 6 999999999999999999987777888889
Q ss_pred cCCCCCCCCcCCCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 244 IYGNKFEDENFILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 244 ~~~~~~~~e~~~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
+++..+++|...++|+++|+||||+.++++++|||||+++++|+||
T Consensus 80 ~~g~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfIt~~~~~~Ld 125 (164)
T cd01926 80 IYGEKFPDENFKLKHTGPGLLSMANAGPNTNGSQFFITTVKTPWLD 125 (164)
T ss_pred ccCCccCCCCccccCCCccEEEeeECCCCCcccEEEEEeCCCCccC
Confidence 9999999998899999999999999999999999999999999998
No 12
>COG0652 PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-35 Score=243.38 Aligned_cols=119 Identities=26% Similarity=0.353 Sum_probs=103.0
Q ss_pred eCceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccCCcccCCCCCcccc-------
Q psy10327 5 IGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLKSRFSNLGGLAEEV------- 77 (289)
Q Consensus 5 i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~g~~~~~~~~~~e~------- 77 (289)
+..|..|+|+||||++.||+||+||+.|| +.|| |+|+.||||||+|||||||+.++.+..-.+..|++|+
T Consensus 3 ~~~t~~G~I~ieL~~~~aP~Tv~NF~~l~--~~g~-Ydg~~FHRVi~~FmiQgGd~~~~~g~gg~~~~f~~E~~~~~~~~ 79 (158)
T COG0652 3 ILETNKGDITIELYPDKAPKTVANFLQLV--KEGF-YDGTIFHRVIPGFMIQGGDPTGGDGTGGPGPPFKDENFALNGDR 79 (158)
T ss_pred eeeccCCCEEEEECCCcCcHHHHHHHHHH--HcCC-CCCceEEEeecCceeecCCCCCCCCCCCCCCCCccccccccccc
Confidence 45789999999999999999999999999 8999 9999999999999999999987744333347788883
Q ss_pred -chhhhhccc----CCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 78 -DDKVLNAAF----IPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 78 -~~g~~~~~~----~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
.+|+++||. .++|| |||++.+.||||++|+|||+|++ ||+|++|+....
T Consensus 80 ~~~G~lsMA~~g~P~t~~SQFFI~~~~~~~Ld~~ytVFG~Vv~GmdvvdkI~~~~~ 135 (158)
T COG0652 80 HKRGTLSMARAGDPNSNGSQFFITVVDNPFLDGKYTVFGQVVEGMDVVDKIKNGDT 135 (158)
T ss_pred CCcceEeEcccCCcCCccCeEEEEecCCcccCCCCcEEEEEehhHHHHHHHHcCCc
Confidence 379999994 35777 66667899999999999999998 999999988543
No 13
>KOG0881|consensus
Probab=100.00 E-value=5.5e-36 Score=231.93 Aligned_cols=117 Identities=27% Similarity=0.457 Sum_probs=106.0
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccC--CcccCCCCCccccc------
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLK--SRFSNLGGLAEEVD------ 78 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~--g~~~~~~~~~~e~~------ 78 (289)
.|++|.|++|||-+.||+||+||.+|+ ++|| |+|..|||||++|||||||+++++ |.||||.+|+||..
T Consensus 15 eTsmG~i~~ElY~kHaP~TC~NF~eLa--rrgY-Yn~v~FHRii~DFmiQGGDPTGTGRGGaSIYG~kF~DEi~~dLkhT 91 (164)
T KOG0881|consen 15 ETSMGKITLELYWKHAPRTCQNFAELA--RRGY-YNGVIFHRIIKDFMIQGGDPTGTGRGGASIYGDKFEDEIHSDLKHT 91 (164)
T ss_pred eecccceehhhhhhcCcHHHHHHHHHH--hccc-ccceeeeehhhhheeecCCCCCCCCCccccccchhhhhhhhhhccc
Confidence 589999999999999999999999999 9999 999999999999999999999875 89999999999974
Q ss_pred -hhhhhcc---cCCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 79 -DKVLNAA---FIPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 79 -~g~~~~~---~~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
.|+++|| ..+||| |||++.|.+||||||++||||.. |+|+++|-..+.
T Consensus 92 GAGILsMANaGPnTNgSQFFiTLAPt~~LDGKHTIFGRV~~Gm~vikr~G~v~T 145 (164)
T KOG0881|consen 92 GAGILSMANAGPNTNGSQFFITLAPTQWLDGKHTIFGRVCSGMEVIKRMGMVET 145 (164)
T ss_pred chhhhhhhccCCCCCCceEEEEecCccccCCcceeehhhhhhHHHHHhhcceec
Confidence 5788888 457898 56667799999999999999997 999999966444
No 14
>PTZ00060 cyclophilin; Provisional
Probab=100.00 E-value=7.4e-34 Score=242.05 Aligned_cols=125 Identities=62% Similarity=1.071 Sum_probs=115.9
Q ss_pred CCCCCCCeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhc-------cCCccccCCceEEEecCcEEEeCCCCCC
Q psy10327 164 PKTKKNPQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTH-------EKGFGYQGSSFHRIIPDFMCQGGDFTNH 236 (289)
Q Consensus 164 ~~~~~~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g-------~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~ 236 (289)
|.+..+++||||+++.+++.|+|+||||.+.||++|+||++||+| +.++ |+++.||||+|+|+||+||+..+
T Consensus 10 ~~~~~~~~v~~di~i~~~~~G~ivIeL~~d~aP~t~~nF~~L~~g~~~~~~g~~~~-Y~~~~fhRvi~~~~iqgGd~~~~ 88 (183)
T PTZ00060 10 PEMSKRPKVFFDISIDNAPAGRIVFELFSDVTPKTAENFRALCIGDKVGSSGKNLH-YKGSIFHRIIPQFMCQGGDITNH 88 (183)
T ss_pred cccCCCCEEEEEEEECCEeCceEEEEEcCCCCcHHHHHHHHHhcCCcccccCcccc-cCCeEEEEEcCCCeEEeCCccCC
Confidence 445568899999999999999999999999999999999999974 3567 99999999999999999998877
Q ss_pred CCCCCcccCCCCCCCCcCCCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 237 NGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 237 ~g~~~~~~~~~~~~~e~~~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
+++++.++|+..+++|...++|+++|+|||++.++++++||||||++++|+||
T Consensus 89 ~g~~g~~~~g~~~~~e~~~~~h~~~G~lsma~~g~~~~~sqFfIt~~~~~~Ld 141 (183)
T PTZ00060 89 NGTGGESIYGRKFTDENFKLKHDQPGLLSMANAGPNTNGSQFFITTVPCPWLD 141 (183)
T ss_pred CCCCCCcccccccCCccccccCCCCCEEEeccCCCCCCcceEEEEeCCCcccC
Confidence 78888999999999998899999999999999999999999999999999998
No 15
>PLN03149 peptidyl-prolyl isomerase H (cyclophilin H); Provisional
Probab=100.00 E-value=9.8e-34 Score=241.66 Aligned_cols=127 Identities=61% Similarity=1.040 Sum_probs=116.3
Q ss_pred CCCCCCCCeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccC---C--ccccCCceEEEecCcEEEeCCCCCCC
Q psy10327 163 DPKTKKNPQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEK---G--FGYQGSSFHRIIPDFMCQGGDFTNHN 237 (289)
Q Consensus 163 ~~~~~~~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~---g--~~Y~g~~f~Rv~~~f~iq~Gd~~~~~ 237 (289)
.|....+++|||||++++++.|+|+||||.+.||+||+||++||+++. | .+|+++.||||+|+|+|||||+..++
T Consensus 12 ~~~~~~~~~v~~di~~~~~~~G~i~ieL~~~~aP~t~~NF~~Lc~g~~~~~g~~~~Y~~~~fhrVi~~f~iqgGd~~~~~ 91 (186)
T PLN03149 12 RPPNPKNPVVFFDVTIGGIPAGRIKMELFADIAPKTAENFRQFCTGEFRKAGLPQGYKGCQFHRVIKDFMIQGGDFLKGD 91 (186)
T ss_pred cCCCCCCCEEEEEEeeCCcccccEEEEEcCCCCcHHHHHHHHHHhhhccccCcccccCCcEEEEEcCCcEEEcCCcccCC
Confidence 455566889999999999999999999999999999999999997542 2 24999999999999999999987778
Q ss_pred CCCCcccCCCCCCCCcCCCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 238 GTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 238 g~~~~~~~~~~~~~e~~~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
++++.++|+..|++|.+.++|+++|+||||++++++++||||||+.++||||
T Consensus 92 g~g~~~~~g~~f~~e~~~~~h~~~G~lsma~~g~~s~~sqFfIt~~~~p~Ld 143 (186)
T PLN03149 92 GTGCVSIYGSKFEDENFIAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLD 143 (186)
T ss_pred CCCcccccCCccCCcccccccCCCCEEEEeeCCCCCcccEEEEECCCCCccC
Confidence 8889999999999998889999999999999999999999999999999998
No 16
>KOG0111|consensus
Probab=100.00 E-value=5.5e-35 Score=246.54 Aligned_cols=124 Identities=40% Similarity=0.602 Sum_probs=114.7
Q ss_pred CceeeCceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceecccccccc---CCcccCCCCCcccc
Q psy10327 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSL---KSRFSNLGGLAEEV 77 (289)
Q Consensus 1 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~---~g~~~~~~~~~~e~ 77 (289)
+||.|+....|||+++|..|.+|+|++||++||||++||+|+|++||||||.||+||||++.. +|+||||.+|.||+
T Consensus 141 ~~ikig~~~~Gri~~~lrtdv~Pmtaenfr~Lctge~gfgykgssfhriip~fmcqggdftn~ngtggksiygkkfdden 220 (298)
T KOG0111|consen 141 HDIKIGEDRAGRIVMLLRTDVVPMTAENFRCLCTGEAGFGYKGSSFHRIIPKFMCQGGDFTNGNGTGGKSIYGKKFDDEN 220 (298)
T ss_pred hheeecccccceEEEeecccCChhhhhhhhhhccccCccCccccchhhhhhhhhccCCccccCCCCCCcccccccccccc
Confidence 689999999999999999999999999999999999999999999999999999999999854 58999999999998
Q ss_pred c------hhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccc
Q psy10327 78 D------DKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQ 124 (289)
Q Consensus 78 ~------~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~ 124 (289)
. +|+++|++ .+||| |||++...+||||+|+|||.|++ |+||++++++
T Consensus 221 f~lkht~pgtlsmansgantngsqffict~ktdwldgkhvvfghv~eg~~vvrq~e~q 278 (298)
T KOG0111|consen 221 FTLKHTMPGTLSMANSGANTNGSQFFICTEKTDWLDGKHVVFGHVVEGMNVVRQVEQQ 278 (298)
T ss_pred eeeecCCCceeeccccCCCCCCceEEEEecccccccCceeEEeeecchHHHHHHHHhc
Confidence 3 79999995 47898 56667789999999999999998 9999999874
No 17
>PTZ00221 cyclophilin; Provisional
Probab=100.00 E-value=1.1e-32 Score=242.90 Aligned_cols=120 Identities=30% Similarity=0.447 Sum_probs=108.9
Q ss_pred CCCCCeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccCCc--------cccCCceEEEecC-cEEEeCCCCCC
Q psy10327 166 TKKNPQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGF--------GYQGSSFHRIIPD-FMCQGGDFTNH 236 (289)
Q Consensus 166 ~~~~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~--------~Y~g~~f~Rv~~~-f~iq~Gd~~~~ 236 (289)
...+++||||+++++.+.|+|+||||.+.||+||+||++||+|..++ +|+++.||||+++ |+||+||+..
T Consensus 49 ~~~~~rVfldisig~~~~GrIvIELf~d~aP~T~eNF~~Lc~g~~g~~~~~g~k~~Y~gt~FhRVi~~~f~iqgGD~~~- 127 (249)
T PTZ00221 49 EQNSCRAFLDISIGDVLAGRLVFELFEDVVPETVENFRALITGSCGIDTNTGVKLDYLYTPVHHVDRNNNIIVLGELDS- 127 (249)
T ss_pred CCCCCEEEEEEeeCCeecceEEEEEeCCCCcHHHHHHHHHhhcccccccccCcccccCCCEEEEEeCCCCEEEeCCCCC-
Confidence 36688999999999999999999999999999999999999876532 3999999999986 8999999853
Q ss_pred CCCCCcccCCCCCCCCcCCCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 237 NGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 237 ~g~~~~~~~~~~~~~e~~~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
.+.+++|..|++|++.++|+++|+||||+.+||+++|||||||.++||||
T Consensus 128 ---~g~s~~G~~f~dE~~~~~h~~~G~LsMan~GpntngSQFfITl~~~p~LD 177 (249)
T PTZ00221 128 ---FNVSSTGTPIADEGYRHRHTERGLLTMISEGPHTSGSVFGITLGPSPSLD 177 (249)
T ss_pred ---CCccCCCCcccCccccccCCCCCEEEeCcCCCCCccceEEEECCCCCccC
Confidence 24567888999999999999999999999999999999999999999998
No 18
>cd01927 cyclophilin_WD40 cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain. This group consists of several hypothetical and putative eukaryotic and bacterial proteins which have a cyclophilin domain and a WD40 domain. Function of the protein is not known.
Probab=99.98 E-value=3.1e-32 Score=224.68 Aligned_cols=106 Identities=51% Similarity=0.806 Sum_probs=99.4
Q ss_pred cEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCCCCCcC-CCCC
Q psy10327 180 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKFEDENF-ILKH 258 (289)
Q Consensus 180 ~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~~~e~~-~~~~ 258 (289)
.|+.|+|+||||.+.||++|+||++|| +.+| |+++.||||+|+|+||+||+. +++.++.++|+..+++|.. .++|
T Consensus 3 ~T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Y~~~~f~Rvi~~f~iq~Gd~~-~~g~g~~~~~~~~~~~e~~~~~~h 78 (148)
T cd01927 3 HTTKGDIHIRLFPEEAPKTVENFTTHA--RNGY-YNNTIFHRVIKGFMIQTGDPT-GDGTGGESIWGKEFEDEFSPSLKH 78 (148)
T ss_pred EeccccEEEEEeCCCCcHHHHHHHHHh--hcCC-cCCcEEEEEcCCcEEEecccC-CCCCCCCcccCCccccccccccCc
Confidence 489999999999999999999999999 7889 999999999999999999986 5778888899989999875 7889
Q ss_pred CCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 259 TGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 259 ~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
+++|+||||+.++++++|||||+++++|+||
T Consensus 79 ~~~G~l~ma~~~~~s~~SqFfIt~~~~p~Ld 109 (148)
T cd01927 79 DRPYTLSMANAGPNTNGSQFFITTVATPWLD 109 (148)
T ss_pred CCCeEEEEeeCCCCCCCceEEEEcCCCcccC
Confidence 9999999999999999999999999999998
No 19
>KOG0883|consensus
Probab=99.97 E-value=7.8e-33 Score=249.85 Aligned_cols=105 Identities=50% Similarity=0.855 Sum_probs=102.1
Q ss_pred EEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCCCCCcC-CCCCC
Q psy10327 181 QEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKFEDENF-ILKHT 259 (289)
Q Consensus 181 t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~~~e~~-~~~~~ 259 (289)
|+.|+|-|||+.|.+|++|+||++|| ++|| |+|+.|||.|++||||||||+ ++|.||.|+||.+|.||.. .+.|+
T Consensus 284 Tn~G~lNlELhcd~~P~aceNFI~lc--~~gY-Ynnt~FHRsIrnFmiQGGDPT-GTG~GGeSiWgKpFkDEf~~~l~H~ 359 (518)
T KOG0883|consen 284 TNHGPLNLELHCDYAPRACENFITLC--KNGY-YNNTIFHRSIRNFMIQGGDPT-GTGRGGESIWGKPFKDEFCSNLSHD 359 (518)
T ss_pred ccCCceeeEeecCcchHHHHHHHHHH--hccc-ccchHHHHHHHHHeeeCCCCC-CCCCCCccccCCccccccCCCCCcC
Confidence 99999999999999999999999999 9999 999999999999999999997 7899999999999999965 79999
Q ss_pred CCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 260 GPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 260 ~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
.||+|||||+|||+|||||||+..++-|||
T Consensus 360 gRGvlSMANsGpnTNgSQFFItyrsckhLd 389 (518)
T KOG0883|consen 360 GRGVLSMANSGPNTNGSQFFITYRSCKHLD 389 (518)
T ss_pred CcceEeeccCCCCCCCceEEEEecchhhcc
Confidence 999999999999999999999999999998
No 20
>cd01922 cyclophilin_SpCYP2_like cyclophilin_SpCYP2_like: cyclophilin 2-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to Schizosaccharomyces pombe cyp-2. These proteins bind their respective SNW chromatin binding protein in autologous systems, in a CsA independent manner indicating interaction with a surface outside the PPIase active site. SNW proteins play a basic and broad range role in signaling.
Probab=99.97 E-value=7e-32 Score=222.05 Aligned_cols=106 Identities=56% Similarity=0.954 Sum_probs=98.8
Q ss_pred cEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCCCCCc-CCCCC
Q psy10327 180 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKFEDEN-FILKH 258 (289)
Q Consensus 180 ~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~~~e~-~~~~~ 258 (289)
.|+.|+|+||||.+.||++|+||++|| +.|| |+++.||||+|+|+|||||+. +++.++.++++..+++|. ..++|
T Consensus 3 ~T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Y~~~~f~Rvi~~f~iq~Gd~~-~~g~~~~~~~~~~~~~e~~~~~~h 78 (146)
T cd01922 3 ETTMGEITLELYWNHAPKTCKNFYELA--KRGY-YNGTIFHRLIKDFMIQGGDPT-GTGRGGASIYGKKFEDEIHPELKH 78 (146)
T ss_pred EeccccEEEEEcCCCCcHHHHHHHHHH--hcCC-cCCcEEEEEcCCcEEEecccC-CCCCCcccccCCCcccccccCcCC
Confidence 389999999999999999999999999 7899 999999999999999999986 567778888999999884 57899
Q ss_pred CCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 259 TGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 259 ~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
+++|+||||+.++++++|||||+++++|+||
T Consensus 79 ~~~G~l~ma~~~~~s~~sqFfIt~~~~p~Ld 109 (146)
T cd01922 79 TGAGILSMANAGPNTNGSQFFITLAPTPWLD 109 (146)
T ss_pred CCCeEEEEeeCCCCCCccEEEEEcCCCcccC
Confidence 9999999999999999999999999999998
No 21
>cd01928 Cyclophilin_PPIL3_like Cyclophilin_PPIL3_like. Proteins similar to Human cyclophilin-like peptidylprolyl cis- trans isomerase (PPIL3). Members of this family lack a key residue important for cyclosporin binding: the tryptophan residue corresponding to W121 in human hCyP-18a; most members have a histidine at this position. The exact function of the protein is not known.
Probab=99.97 E-value=1.3e-31 Score=222.10 Aligned_cols=105 Identities=52% Similarity=0.835 Sum_probs=98.5
Q ss_pred EEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCCCCCcC-CCCCC
Q psy10327 181 QEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKFEDENF-ILKHT 259 (289)
Q Consensus 181 t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~~~e~~-~~~~~ 259 (289)
|+.|+|+||||++.||++|+||++|| +.+| |+++.||||+|+|+||+||+. ++++++.++|+..+++|.. .++|+
T Consensus 7 T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Y~~~~f~rv~~~f~iq~Gd~~-~~g~g~~~~~~~~~~~e~~~~~~~~ 82 (153)
T cd01928 7 TNLGDIKIELFCDDCPKACENFLALC--ASGY-YNGCIFHRNIKGFMVQTGDPT-GTGKGGESIWGKKFEDEFRETLKHD 82 (153)
T ss_pred EccccEEEEEcCCCCcHHHHHHHHHH--hcCc-cCCcEEEEeCCCCEEEccccC-CCCCCCCccCCCccccccccCCCcC
Confidence 99999999999999999999999999 7789 999999999999999999986 5677888889999999875 57898
Q ss_pred CCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 260 GPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 260 ~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
++|+||||++++++++|||||+++++||||
T Consensus 83 ~~G~v~ma~~~~~~~~SqFfI~~~~~~~Ld 112 (153)
T cd01928 83 SRGVVSMANNGPNTNGSQFFITYAKQPHLD 112 (153)
T ss_pred CCcEEEEeeCCCCCcccEEEEEeCCCcccC
Confidence 999999999999999999999999999998
No 22
>KOG0884|consensus
Probab=99.97 E-value=3.1e-32 Score=209.91 Aligned_cols=105 Identities=52% Similarity=0.835 Sum_probs=101.0
Q ss_pred EEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCCCCCcC-CCCCC
Q psy10327 181 QEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKFEDENF-ILKHT 259 (289)
Q Consensus 181 t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~~~e~~-~~~~~ 259 (289)
|..|+|.||||.+.+|++|+||+.|| ...| |+++.|||-+|+|++|+||++ ..|.||.|+||.+|+||.. -++|+
T Consensus 7 t~~gdikiev~~e~tpktce~~l~~~--~~~~-~n~~~~~~~~~~f~v~~~~~~-~tgrgg~siwg~~fede~~~~lkh~ 82 (161)
T KOG0884|consen 7 TDVGDIKIEVFCERTPKTCENFLALC--ASDY-YNGCIFHRNIKGFMVQTGDPT-HTGRGGNSIWGKKFEDEYSEYLKHN 82 (161)
T ss_pred eccCcEEEEEEecCChhHHHHHHHHh--hhhh-ccceeecCCCCCcEEEeCCCC-CCCCCCccccCCcchHHHHHHHhhc
Confidence 88999999999999999999999999 8888 999999999999999999997 6899999999999999976 58999
Q ss_pred CCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 260 GPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 260 ~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
.||+|||||.|||+|+||||||.+.+||||
T Consensus 83 ~rg~vsmanngp~tn~sqffity~kq~hld 112 (161)
T KOG0884|consen 83 VRGVVSMANNGPNTNGSQFFITYGKQPHLD 112 (161)
T ss_pred cceeEEcccCCCCCCCceEEEEecCCCccc
Confidence 999999999999999999999999999998
No 23
>cd01923 cyclophilin_RING cyclophilin_RING: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human cyclophilin A exhibit reduced peptidylprolyl cis- trans isomerase activity and lack a residue important for cyclophilin binding. Human hCyP-60 has been shown to physically interact with the proteinase inhibitor peptide eglin c and; C. elegans MOG-6 to physically interact with MEP-1, a nuclear zinc finger protein. MOG-6 has been shown to function in germline sex determination.
Probab=99.97 E-value=2.5e-31 Score=221.82 Aligned_cols=105 Identities=51% Similarity=0.856 Sum_probs=98.8
Q ss_pred EEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCCCCCc-CCCCCC
Q psy10327 181 QEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKFEDEN-FILKHT 259 (289)
Q Consensus 181 t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~~~e~-~~~~~~ 259 (289)
|+.|+|+||||.+.||++|+||++|| +.|| |+++.||||+|+|+||+||+. +++.++.++++..+++|. ..++|+
T Consensus 6 T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Y~~~~f~rv~~~~~iq~Gd~~-~~g~~~~~~~g~~~~~E~~~~~~h~ 81 (159)
T cd01923 6 TNKGDLNLELHCDKAPKACENFIKLC--KKGY-YDGTIFHRSIRNFMIQGGDPT-GTGRGGESIWGKPFKDEFKPNLSHD 81 (159)
T ss_pred EccccEEEEEeCCCChHHHHHHHHHH--hcCc-cCCcEEEEEeCCcEEEecccC-CCCCCCccccCCccCcccccCcCcC
Confidence 99999999999999999999999999 7899 999999999999999999986 577888899999999885 467899
Q ss_pred CCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 260 GPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 260 ~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
++|+||||++++++++|||||+++++||||
T Consensus 82 ~~G~v~ma~~~~~s~~sqFfIt~~~~~~Ld 111 (159)
T cd01923 82 GRGVLSMANSGPNTNGSQFFITYRSCKHLD 111 (159)
T ss_pred CCcEEEEeeCCCCCcccEEEEECCCCcccC
Confidence 999999999999999999999999999998
No 24
>cd01925 cyclophilin_CeCYP16-like cyclophilin_CeCYP16-like: cyclophilin-type peptidylprolyl cis- trans isomerase) (PPIase) domain similar to Caenorhabditis elegans cyclophilin 16. C. elegans CeCYP-16, compared to the archetypal cyclophilin Human cyclophilin A has, a reduced peptidylprolyl cis- trans isomerase activity, is cyclosporin insensitive and shows an altered substrate preference favoring, hydrophobic, acidic or amide amino acids. Most members of this subfamily have a glutamate residue in the active site at the position equivalent to a tryptophan (W121 in Human cyclophilin A), which has been shown to be important for cyclophilin binding.
Probab=99.97 E-value=3.5e-31 Score=223.47 Aligned_cols=111 Identities=41% Similarity=0.748 Sum_probs=102.3
Q ss_pred CeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCC
Q psy10327 170 PQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKF 249 (289)
Q Consensus 170 ~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~ 249 (289)
.+|.++ |+.|+|+||||.+.||+||+||++|| +.+| |+++.||||+|+|+|||||+. ++++++.++|+..+
T Consensus 6 ~~v~i~-----Ts~G~i~ieL~~~~~P~t~~nF~~L~--~~~~-Y~~~~f~Rvi~~f~iQgGd~~-~~g~g~~s~~g~~~ 76 (171)
T cd01925 6 GKVILK-----TTAGDIDIELWSKEAPKACRNFIQLC--LEGY-YDNTIFHRVVPGFIIQGGDPT-GTGTGGESIYGEPF 76 (171)
T ss_pred cEEEEE-----EccccEEEEEeCCCChHHHHHHHHHH--hcCC-CCCCEEEEEcCCcEEEccccC-CCCccCcccCCCcc
Confidence 456666 89999999999999999999999999 7889 999999999999999999986 57888889999999
Q ss_pred CCCcC-CCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 250 EDENF-ILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 250 ~~e~~-~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
++|.. .++|+++|+||||++++++++|||||+++++|+||
T Consensus 77 ~~E~~~~~~~~~~G~l~ma~~g~~s~~sqFfIt~~~~~~ld 117 (171)
T cd01925 77 KDEFHSRLRFNRRGLVGMANAGDDSNGSQFFFTLDKADELN 117 (171)
T ss_pred CcccccCcCCCCCcEEEECcCCCCCcccEEEEEcCCCcccC
Confidence 98865 57899999999999999999999999999999998
No 25
>PTZ00221 cyclophilin; Provisional
Probab=99.97 E-value=1.3e-31 Score=236.06 Aligned_cols=125 Identities=25% Similarity=0.291 Sum_probs=108.1
Q ss_pred CceeeCceeeeEEEEEEcCCCChHHHHHHHHhhccCCCc--------ccCCCeeeeeccc-ceeccccccccCCcccCCC
Q psy10327 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGF--------GYQGSSFHRIIPD-FVSFMTKHQSLKSRFSNLG 71 (289)
Q Consensus 1 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~--------~Y~g~~f~rv~~~-~~iq~Gd~~~~~g~~~~~~ 71 (289)
|||+|+++..|||+||||.+.||+||+||++||+|+.+. +|+++.||||+|+ |+||+||+.. .+.++||.
T Consensus 57 ldisig~~~~GrIvIELf~d~aP~T~eNF~~Lc~g~~g~~~~~g~k~~Y~gt~FhRVi~~~f~iqgGD~~~-~g~s~~G~ 135 (249)
T PTZ00221 57 LDISIGDVLAGRLVFELFEDVVPETVENFRALITGSCGIDTNTGVKLDYLYTPVHHVDRNNNIIVLGELDS-FNVSSTGT 135 (249)
T ss_pred EEEeeCCeecceEEEEEeCCCCcHHHHHHHHHhhcccccccccCcccccCCCEEEEEeCCCCEEEeCCCCC-CCccCCCC
Confidence 699999999999999999999999999999999877642 2999999999986 8999999764 46778888
Q ss_pred CCcccc------chhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 72 GLAEEV------DDKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 72 ~~~~e~------~~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
.|++|+ .+|+++|+. .++|| |||++.++|+||++|+|||||++ ||||++|+..+.
T Consensus 136 ~f~dE~~~~~h~~~G~LsMan~GpntngSQFfITl~~~p~LDgk~vVFGrVveGmdVv~kIe~v~~ 201 (249)
T PTZ00221 136 PIADEGYRHRHTERGLLTMISEGPHTSGSVFGITLGPSPSLDFKQVVFGKAVDDLSLLEKLESLPL 201 (249)
T ss_pred cccCccccccCCCCCEEEeCcCCCCCccceEEEECCCCCccCCCceEEEEEEeCHHHHHHHHcCCc
Confidence 898885 368999984 45677 66667789999999999999998 999999986543
No 26
>cd01926 cyclophilin_ABH_like cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. These enzymes have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. As cyclophilins, Human hCyP-A, human cyclophilin-B (hCyP-19), S. cerevisiae Cpr1 and C. elegans Cyp-3, are inhibited by the immunosuppressive drug cyclopsporin A (CsA). CsA binds to the PPIase active site. Cyp-3. S. cerevisiae Cpr1 interacts with the Rpd3 - Sin3 complex and in addition is a component of the Set3 complex. S. cerevisiae Cpr1 has also been shown to have a role in Zpr1p nuclear transport. Human cyclophilin H associates with the [U4/U6.U5] tri-snRNP particles of the spl
Probab=99.97 E-value=1.9e-31 Score=223.77 Aligned_cols=125 Identities=34% Similarity=0.533 Sum_probs=107.7
Q ss_pred CceeeCceeeeEEEEEEcCCCChHHHHHHHHhhccCCC------cccCCCeeeeecccceecccccc---ccCCcccCCC
Q psy10327 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKG------FGYQGSSFHRIIPDFVSFMTKHQ---SLKSRFSNLG 71 (289)
Q Consensus 1 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g------~~Y~g~~f~rv~~~~~iq~Gd~~---~~~g~~~~~~ 71 (289)
|||+++++++|+|+||||.+.||+||+||++||++.++ + |+++.||||+|+|+||+||+. +.++.++|+.
T Consensus 5 ~di~i~~~~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~~~~~~-Y~~~~f~Rv~~~~~iq~Gd~~~~~g~~~~~~~g~ 83 (164)
T cd01926 5 FDITIGGEPAGRIVMELFADVVPKTAENFRALCTGEKGKGGKPFG-YKGSTFHRVIPDFMIQGGDFTRGNGTGGKSIYGE 83 (164)
T ss_pred EEEeECCeeceeEEEEEeCCCCCHHHHHHHHHhcccCCCcccccc-cCCCEEEEEeCCcEEEcCCccCCCCCCCCcccCC
Confidence 79999999999999999999999999999999987666 6 999999999999999999965 2346788888
Q ss_pred CCcccc------chhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 72 GLAEEV------DDKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 72 ~~~~e~------~~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
.+++|. ..|+++|+. .++|| |||++.++|+||++|+|||||++ ||||++|+..+.
T Consensus 84 ~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfIt~~~~~~Ld~~~tvFG~V~~G~dvl~~i~~~~~ 149 (164)
T cd01926 84 KFPDENFKLKHTGPGLLSMANAGPNTNGSQFFITTVKTPWLDGKHVVFGKVVEGMDVVKKIENVGS 149 (164)
T ss_pred ccCCCCccccCCCccEEEeeECCCCCcccEEEEEeCCCCccCCcccEEEEEEEcHHHHHHHHcCCC
Confidence 888774 368888873 34556 67777799999999999999998 999999987554
No 27
>cd01927 cyclophilin_WD40 cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain. This group consists of several hypothetical and putative eukaryotic and bacterial proteins which have a cyclophilin domain and a WD40 domain. Function of the protein is not known.
Probab=99.97 E-value=1.9e-31 Score=219.97 Aligned_cols=117 Identities=22% Similarity=0.347 Sum_probs=101.4
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceecccccccc--CCcccCCCCCccccc------
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSL--KSRFSNLGGLAEEVD------ 78 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~--~g~~~~~~~~~~e~~------ 78 (289)
.|+.|+|+||||.+.||+||+||++|| +.|| |+++.||||+|+|++||||+.+. ++.++|+..+++|..
T Consensus 3 ~T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Y~~~~f~Rvi~~f~iq~Gd~~~~g~g~~~~~~~~~~~e~~~~~~h~ 79 (148)
T cd01927 3 HTTKGDIHIRLFPEEAPKTVENFTTHA--RNGY-YNNTIFHRVIKGFMIQTGDPTGDGTGGESIWGKEFEDEFSPSLKHD 79 (148)
T ss_pred EeccccEEEEEeCCCCcHHHHHHHHHh--hcCC-cCCcEEEEEcCCcEEEecccCCCCCCCCcccCCccccccccccCcC
Confidence 578999999999999999999999999 7889 99999999999999999998654 467888888888753
Q ss_pred -hhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 79 -DKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 79 -~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
+|+++|+. .++|| |||++.++|+||++|+|||||++ ||+|++|+....
T Consensus 80 ~~G~l~ma~~~~~s~~SqFfIt~~~~p~Ldg~~tvFG~V~~G~dvl~~I~~~~~ 133 (148)
T cd01927 80 RPYTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQRIENVKT 133 (148)
T ss_pred CCeEEEEeeCCCCCCCceEEEEcCCCcccCCCceEEEEEEcCHHHHHHHHcCCC
Confidence 48888873 34566 67777799999999999999998 999999987544
No 28
>KOG0882|consensus
Probab=99.97 E-value=9.2e-32 Score=247.20 Aligned_cols=120 Identities=23% Similarity=0.342 Sum_probs=107.0
Q ss_pred eeCceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceecccccccc--CCcccCCCCCccccchh-
Q psy10327 4 KIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSL--KSRFSNLGGLAEEVDDK- 80 (289)
Q Consensus 4 ~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~--~g~~~~~~~~~~e~~~g- 80 (289)
+|.-|++|+|.|.||+++||+||+||...| +.|| |+|..|||||++||||+||+.+. ||+||||+.|+||..+.
T Consensus 407 aiihtt~gdi~~kl~p~ecpktvenf~th~--rngy-y~~~~fhriik~fmiqtgdp~g~gtggesiwg~dfedefh~~l 483 (558)
T KOG0882|consen 407 AIIHTTQGDIHIKLYPEECPKTVENFTTHS--RNGY-YDNHTFHRIIKGFMIQTGDPLGDGTGGESIWGKDFEDEFHPNL 483 (558)
T ss_pred eEEEecccceEEEecccccchhhhhhhccc--cCcc-ccCcchHHhhhhheeecCCCCCCCCCCcccccccchhhcCccc
Confidence 456689999999999999999999999999 9999 99999999999999999999865 58999999999998654
Q ss_pred ------hhhcc---cCCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 81 ------VLNAA---FIPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 81 ------~~~~~---~~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
.++|| ..+||| |||++.|.|||||||+|||||++ ||||++|+....
T Consensus 484 rhdrpft~smanag~ntngsqffit~~~tpwld~khtvfgrv~~gm~vvqri~~v~t 540 (558)
T KOG0882|consen 484 RHDRPFTVSMANAGPNTNGSQFFITTVPTPWLDGKHTVFGRVTAGMDVVQRIEQVKT 540 (558)
T ss_pred ccCCCceEEecccCCCCCCceEEEEecCccccCCcceeEEEEecchhHHhHhhhccc
Confidence 45566 457998 66667899999999999999998 999999987554
No 29
>PRK10903 peptidyl-prolyl cis-trans isomerase A (rotamase A); Provisional
Probab=99.97 E-value=2.3e-30 Score=221.58 Aligned_cols=114 Identities=28% Similarity=0.503 Sum_probs=97.0
Q ss_pred CCCCCCeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCccc
Q psy10327 165 KTKKNPQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSI 244 (289)
Q Consensus 165 ~~~~~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~ 244 (289)
+++..++|.++ |+.|+|+||||.+.||+||+||++|| +.|| |+++.||||+|+|+||||++....+ ...
T Consensus 24 ~~~~~~~v~l~-----T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Ydg~~FhRvi~~f~iQgG~~~~~~~---~~~ 92 (190)
T PRK10903 24 AAKGDPHVLLT-----TSAGNIELELNSQKAPVSVKNFVDYV--NSGF-YNNTTFHRVIPGFMIQGGGFTEQMQ---QKK 92 (190)
T ss_pred ccCCCcEEEEE-----eccccEEEEEeCCCCcHHHHHHHHHH--hcCC-cCCcEEEEEeCCceEEeCCcCCCCC---CCC
Confidence 44566677666 89999999999999999999999999 8899 9999999999999999999764321 123
Q ss_pred CCCCCCCCcCCCCCCCCcEEEEecCC-CCCCCceEEEEcCCCCCCC
Q psy10327 245 YGNKFEDENFILKHTGPGVLSMANSG-PNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 245 ~~~~~~~e~~~~~~~~~G~v~ma~~~-~~s~~sqFfI~l~~~~~LD 289 (289)
++.++.+|.....|+++|+|||||.+ +|+++|||||+++++|+||
T Consensus 93 ~~~~~~~e~~~~l~~~~G~lama~~~~~~sn~SQFfIt~~~~~~ld 138 (190)
T PRK10903 93 PNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLD 138 (190)
T ss_pred CCCcccCcccccCcCCCcEEEeCCCCCCCCcccEEEEECcCccccc
Confidence 45677888665567789999999976 9999999999999999997
No 30
>cd01922 cyclophilin_SpCYP2_like cyclophilin_SpCYP2_like: cyclophilin 2-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to Schizosaccharomyces pombe cyp-2. These proteins bind their respective SNW chromatin binding protein in autologous systems, in a CsA independent manner indicating interaction with a surface outside the PPIase active site. SNW proteins play a basic and broad range role in signaling.
Probab=99.97 E-value=4.4e-31 Score=217.29 Aligned_cols=117 Identities=26% Similarity=0.435 Sum_probs=101.0
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceecccccccc--CCcccCCCCCcccc-------
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSL--KSRFSNLGGLAEEV------- 77 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~--~g~~~~~~~~~~e~------- 77 (289)
.|+.|+|+||||.+.||+||+||++|| +.|| |+++.||||+|+|++||||+.+. ++.++|+..|++|.
T Consensus 3 ~T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Y~~~~f~Rvi~~f~iq~Gd~~~~g~~~~~~~~~~~~~e~~~~~~h~ 79 (146)
T cd01922 3 ETTMGEITLELYWNHAPKTCKNFYELA--KRGY-YNGTIFHRLIKDFMIQGGDPTGTGRGGASIYGKKFEDEIHPELKHT 79 (146)
T ss_pred EeccccEEEEEcCCCCcHHHHHHHHHH--hcCC-cCCcEEEEEcCCcEEEecccCCCCCCcccccCCCcccccccCcCCC
Confidence 489999999999999999999999999 7889 99999999999999999998644 36788888888774
Q ss_pred chhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 78 DDKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 78 ~~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
.+|+++|+. .+++| |||++.++|+||++|+|||||++ ||||++|+....
T Consensus 80 ~~G~l~ma~~~~~s~~sqFfIt~~~~p~Ld~~~tvFG~V~~G~dvl~~I~~~~~ 133 (146)
T cd01922 80 GAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVSKGMKVIENMVEVQT 133 (146)
T ss_pred CCeEEEEeeCCCCCCccEEEEEcCCCcccCCCCCEEEEEEcCHHHHHHHHhCCC
Confidence 258888873 34565 67777899999999999999998 999999987544
No 31
>PTZ00060 cyclophilin; Provisional
Probab=99.97 E-value=6.2e-31 Score=224.08 Aligned_cols=124 Identities=30% Similarity=0.481 Sum_probs=106.4
Q ss_pred CceeeCceeeeEEEEEEcCCCChHHHHHHHHhhcc-------CCCcccCCCeeeeecccceeccccccc---cCCcccCC
Q psy10327 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTH-------EKGFGYQGSSFHRIIPDFVSFMTKHQS---LKSRFSNL 70 (289)
Q Consensus 1 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g-------~~g~~Y~g~~f~rv~~~~~iq~Gd~~~---~~g~~~~~ 70 (289)
||+++++++.|+|+||||.+.||+||+||++||+| +.++ |+++.||||+|+++||+||+.. .++.++|+
T Consensus 20 ~di~i~~~~~G~ivIeL~~d~aP~t~~nF~~L~~g~~~~~~g~~~~-Y~~~~fhRvi~~~~iqgGd~~~~~g~~g~~~~g 98 (183)
T PTZ00060 20 FDISIDNAPAGRIVFELFSDVTPKTAENFRALCIGDKVGSSGKNLH-YKGSIFHRIIPQFMCQGGDITNHNGTGGESIYG 98 (183)
T ss_pred EEEEECCEeCceEEEEEcCCCCcHHHHHHHHHhcCCcccccCcccc-cCCeEEEEEcCCCeEEeCCccCCCCCCCCcccc
Confidence 69999999999999999999999999999999975 3457 9999999999999999999753 35678888
Q ss_pred CCCcccc------chhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCccccc
Q psy10327 71 GGLAEEV------DDKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQ 125 (289)
Q Consensus 71 ~~~~~e~------~~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~ 125 (289)
..+++|. .+|+++|+. .+++| |||++.+.|+||++|+|||||++ ||||++|+...
T Consensus 99 ~~~~~e~~~~~h~~~G~lsma~~g~~~~~sqFfIt~~~~~~Ldg~~tvFG~Vi~G~dvl~~I~~~~ 164 (183)
T PTZ00060 99 RKFTDENFKLKHDQPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVIEGMEVVRAMEKEG 164 (183)
T ss_pred cccCCccccccCCCCCEEEeccCCCCCCcceEEEEeCCCcccCCCccEEEEEEccHHHHHHHHccC
Confidence 8887774 258899973 34555 67777899999999999999998 99999998643
No 32
>PLN03149 peptidyl-prolyl isomerase H (cyclophilin H); Provisional
Probab=99.97 E-value=5.3e-31 Score=224.87 Aligned_cols=126 Identities=31% Similarity=0.449 Sum_probs=106.5
Q ss_pred CceeeCceeeeEEEEEEcCCCChHHHHHHHHhhccCC---C--cccCCCeeeeecccceecccccc---ccCCcccCCCC
Q psy10327 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEK---G--FGYQGSSFHRIIPDFVSFMTKHQ---SLKSRFSNLGG 72 (289)
Q Consensus 1 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~---g--~~Y~g~~f~rv~~~~~iq~Gd~~---~~~g~~~~~~~ 72 (289)
|||+++++..|||+||||.+.||+||+||++||+|+. | .+|+++.||||+|+|+|||||+. +.++.++|+..
T Consensus 23 ~di~~~~~~~G~i~ieL~~~~aP~t~~NF~~Lc~g~~~~~g~~~~Y~~~~fhrVi~~f~iqgGd~~~~~g~g~~~~~g~~ 102 (186)
T PLN03149 23 FDVTIGGIPAGRIKMELFADIAPKTAENFRQFCTGEFRKAGLPQGYKGCQFHRVIKDFMIQGGDFLKGDGTGCVSIYGSK 102 (186)
T ss_pred EEEeeCCcccccEEEEEcCCCCcHHHHHHHHHHhhhccccCcccccCCcEEEEEcCCcEEEcCCcccCCCCCcccccCCc
Confidence 6899999999999999999999999999999997653 2 24999999999999999999974 23467888888
Q ss_pred Ccccc------chhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEE-E-eccccCcccccC
Q psy10327 73 LAEEV------DDKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRII-R-VNLAKPQKVQQT 126 (289)
Q Consensus 73 ~~~e~------~~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi-~-mdvv~~i~~~~~ 126 (289)
|++|. .+|+++|+. .+++| |||++.+.|+||++|+|||||+ + ||||++|+....
T Consensus 103 f~~e~~~~~h~~~G~lsma~~g~~s~~sqFfIt~~~~p~Ldg~~tVFG~Vi~eG~dvl~~I~~~~~ 168 (186)
T PLN03149 103 FEDENFIAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVAT 168 (186)
T ss_pred cCCcccccccCCCCEEEEeeCCCCCcccEEEEECCCCCccCCCceEEEEEEECcHHHHHHHHcCCC
Confidence 88774 368999984 34566 6666779999999999999999 6 999999986444
No 33
>cd01928 Cyclophilin_PPIL3_like Cyclophilin_PPIL3_like. Proteins similar to Human cyclophilin-like peptidylprolyl cis- trans isomerase (PPIL3). Members of this family lack a key residue important for cyclosporin binding: the tryptophan residue corresponding to W121 in human hCyP-18a; most members have a histidine at this position. The exact function of the protein is not known.
Probab=99.97 E-value=1.2e-30 Score=216.43 Aligned_cols=117 Identities=23% Similarity=0.319 Sum_probs=100.7
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceecccccccc--CCcccCCCCCcccc-------
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSL--KSRFSNLGGLAEEV------- 77 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~--~g~~~~~~~~~~e~------- 77 (289)
.|+.|+|+||||.+.||+||+||++|| +.|| |+++.||||+|+|++|+||+... ++.++|+..+++|.
T Consensus 6 ~T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Y~~~~f~rv~~~f~iq~Gd~~~~g~g~~~~~~~~~~~e~~~~~~~~ 82 (153)
T cd01928 6 HTNLGDIKIELFCDDCPKACENFLALC--ASGY-YNGCIFHRNIKGFMVQTGDPTGTGKGGESIWGKKFEDEFRETLKHD 82 (153)
T ss_pred EEccccEEEEEcCCCCcHHHHHHHHHH--hcCc-cCCcEEEEeCCCCEEEccccCCCCCCCCccCCCccccccccCCCcC
Confidence 489999999999999999999999999 7789 99999999999999999998754 35778888888775
Q ss_pred chhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 78 DDKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 78 ~~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
.+|+++|+. .++|| |||++.+.|+||++|+|||||++ ||+|++|+..+.
T Consensus 83 ~~G~v~ma~~~~~~~~SqFfI~~~~~~~Ld~~~tvFG~V~~G~dvl~~I~~~~~ 136 (153)
T cd01928 83 SRGVVSMANNGPNTNGSQFFITYAKQPHLDGKYTVFGKVIDGFETLDTLEKLPV 136 (153)
T ss_pred CCcEEEEeeCCCCCcccEEEEEeCCCcccCCCceEEEEEEeCHHHHHHHHcCCC
Confidence 258888873 34566 66667789999999999999998 999999987544
No 34
>cd01921 cyclophilin_RRM cyclophilin_RRM: cyclophilin-type peptidylprolyl cis- trans isomerase domain occuring with a C-terminal RNA recognition motif domain (RRM). This subfamily of the cyclophilin domain family contains a number of eukaryotic cyclophilins having the RRM domain including the nuclear proteins: human hCyP-57, Arabidopsis thaliana AtCYP59, Caenorhabditis elegans CeCyP-44 and Paramecium tetrurelia Kin241. The Kin241 protein has been shown to have a role in cell morphogenesis.
Probab=99.97 E-value=4.3e-30 Score=215.94 Aligned_cols=106 Identities=38% Similarity=0.596 Sum_probs=93.8
Q ss_pred cEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCC-------CCCCCC
Q psy10327 180 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG-------NKFEDE 252 (289)
Q Consensus 180 ~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~-------~~~~~e 252 (289)
+|+.|+|+||||.+.||+||+||++|| +.+| |+++.||||+|+|+|||||+. .++.++.++++ ..+++|
T Consensus 3 ~Ts~G~i~ieL~~~~aP~t~~nF~~L~--~~~~-Y~g~~fhrvi~~f~iQgGd~~-~~g~~~~~~~~~~~~~~~~~~~~e 78 (166)
T cd01921 3 ETTLGDLVIDLFTDECPLACLNFLKLC--KLKY-YNFCLFYNVQKDFIAQTGDPT-GTGAGGESIYSQLYGRQARFFEPE 78 (166)
T ss_pred EeccCCEEEEEcCCCCCHHHHHHHHHH--hcCC-cCCCEEEEEeCCceEEECCcC-CCCCCCcccccccccccCcccCcc
Confidence 489999999999999999999999999 7889 999999999999999999986 56667766664 245666
Q ss_pred c-CCCCCCCCcEEEEecCCCCCCCceEEEEcCC-CCCCC
Q psy10327 253 N-FILKHTGPGVLSMANSGPNTNGSQFFLCTTK-TEWNI 289 (289)
Q Consensus 253 ~-~~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~-~~~LD 289 (289)
. ..++|+++|+||||+.++++++||||||+++ +||||
T Consensus 79 ~~~~~~h~~~G~l~ma~~~~~~~~SQFfIt~~~~~~~Ld 117 (166)
T cd01921 79 ILPLLKHSKKGTVSMVNAGDNLNGSQFYITLGENLDYLD 117 (166)
T ss_pred cCCccccCCceEEEEeECCCCCccceEEEEcCCCCcccC
Confidence 5 4689999999999999999999999999976 79997
No 35
>cd01923 cyclophilin_RING cyclophilin_RING: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human cyclophilin A exhibit reduced peptidylprolyl cis- trans isomerase activity and lack a residue important for cyclophilin binding. Human hCyP-60 has been shown to physically interact with the proteinase inhibitor peptide eglin c and; C. elegans MOG-6 to physically interact with MEP-1, a nuclear zinc finger protein. MOG-6 has been shown to function in germline sex determination.
Probab=99.96 E-value=2.2e-30 Score=216.19 Aligned_cols=117 Identities=24% Similarity=0.363 Sum_probs=101.3
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceecccccccc--CCcccCCCCCcccc-------
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSL--KSRFSNLGGLAEEV------- 77 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~--~g~~~~~~~~~~e~------- 77 (289)
.|+.|+|+||||.+.||+||+||++|| +.|| |+++.||||+|+|++|+||+..+ ++.++|+..+++|.
T Consensus 5 ~T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Y~~~~f~rv~~~~~iq~Gd~~~~g~~~~~~~g~~~~~E~~~~~~h~ 81 (159)
T cd01923 5 HTNKGDLNLELHCDKAPKACENFIKLC--KKGY-YDGTIFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDEFKPNLSHD 81 (159)
T ss_pred EEccccEEEEEeCCCChHHHHHHHHHH--hcCc-cCCcEEEEEeCCcEEEecccCCCCCCCccccCCccCcccccCcCcC
Confidence 489999999999999999999999999 7899 99999999999999999998754 46788888888774
Q ss_pred chhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 78 DDKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 78 ~~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
.+|+++|+. .++|| |||++.++|+||++|+|||||++ ||+|++|+..+.
T Consensus 82 ~~G~v~ma~~~~~s~~sqFfIt~~~~~~Ld~~~~vFG~V~~G~~vl~~I~~~~~ 135 (159)
T cd01923 82 GRGVLSMANSGPNTNGSQFFITYRSCKHLDGKHTVFGRVVGGLETLEAMENVPD 135 (159)
T ss_pred CCcEEEEeeCCCCCcccEEEEECCCCcccCCCccEEEEEEcCHHHHHHHHcCCC
Confidence 257888873 34555 67777899999999999999998 999999987543
No 36
>cd01920 cyclophilin_EcCYP_like cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E. coli cyclophilin A and Streptomyces antibioticus SanCyp18. Compared to the archetypal cyclophilin Human cyclophilin A, these have reduced affinity for cyclosporin A. E. coli cyclophilin A has a similar peptidylprolyl cis- trans isomerase activity to the human cyclophilin A. Most members of this subfamily contain a phenylalanine residue at the position equivalent to Human cyclophilin W121, where a tyrptophan has been shown to be important for cyclophilin binding.
Probab=99.96 E-value=7.7e-30 Score=212.02 Aligned_cols=103 Identities=31% Similarity=0.463 Sum_probs=90.3
Q ss_pred EEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCCCCCcCCCCCCC
Q psy10327 181 QEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTG 260 (289)
Q Consensus 181 t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~~~e~~~~~~~~ 260 (289)
|+.|+|+||||.+.||+||+||++|| +.|| |+++.||||+|+|+|||||+....+. ..++.++.+|.....|++
T Consensus 4 T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Yd~~~fhRvi~~f~iQ~Gd~~~~~~~---~~~~~~~~~e~~~~~~~~ 77 (155)
T cd01920 4 TSLGDIVVELYDDKAPITVENFLAYV--RKGF-YDNTIFHRVISGFVIQGGGFTPDLAQ---KETLKPIKNEAGNGLSNT 77 (155)
T ss_pred ecceeEEEEEeCCCCcHHHHHHHHHH--hcCC-CCCCEEEEEeCCcEEEeCCCCCCCCc---cccCCcccCcccccccCC
Confidence 89999999999999999999999999 7899 99999999999999999998643322 234556777766666788
Q ss_pred CcEEEEecCC-CCCCCceEEEEcCCCCCCC
Q psy10327 261 PGVLSMANSG-PNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 261 ~G~v~ma~~~-~~s~~sqFfI~l~~~~~LD 289 (289)
+|+||||+++ |++++|||||+++++|+||
T Consensus 78 ~G~v~ma~~~~~~s~~SqFfI~~~~~~~ld 107 (155)
T cd01920 78 RGTIAMARTNAPDSATSQFFINLKDNASLD 107 (155)
T ss_pred ceEEEECCCCCCCCccceEEEECCCchhcC
Confidence 9999999976 9999999999999999997
No 37
>KOG0885|consensus
Probab=99.96 E-value=2.4e-30 Score=232.80 Aligned_cols=112 Identities=41% Similarity=0.720 Sum_probs=104.8
Q ss_pred CCeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCC
Q psy10327 169 NPQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNK 248 (289)
Q Consensus 169 ~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~ 248 (289)
+.+|.+. |+.|+|-||||+..||++|.||++|| -.|| |+|+.|||++|+|++|||||+ ++|+||.+|||.+
T Consensus 12 tgkvil~-----TT~G~I~iELW~kE~P~acrnFiqKO--Gegy-y~nt~fhrlvp~f~~Qggdp~-~~gtGgesiyg~~ 82 (439)
T KOG0885|consen 12 TGKVILK-----TTKGDIDIELWAKECPKACRNFIQLC--LEGY-YDNTEFHRLVPGFLVQGGDPT-GTGTGGESIYGRP 82 (439)
T ss_pred cceEEEE-----eccCceeeeehhhhhhHHHHHHHHHH--Hhcc-ccCceeeeeccchhcccCCCC-CCCCCcccccccc
Confidence 3456665 88999999999999999999999999 8899 999999999999999999997 7899999999999
Q ss_pred CCCCcC-CCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 249 FEDENF-ILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 249 ~~~e~~-~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
|.+|.. +++++++|+|+|||.+.+.||||||+||+++||||
T Consensus 83 fadE~h~Rlrf~rrGlvgmana~~~~ngsqFfftl~~~~el~ 124 (439)
T KOG0885|consen 83 FADEFHPRLRFNRRGLVGMANAGNDDNGSQFFFTLGDTPELN 124 (439)
T ss_pred chhhcCcceeeeccceeeecccCCCCCCceEEEEecCChHhc
Confidence 999964 79999999999999999999999999999999986
No 38
>KOG0865|consensus
Probab=99.96 E-value=3e-30 Score=214.15 Aligned_cols=122 Identities=74% Similarity=1.287 Sum_probs=117.7
Q ss_pred CCCeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEE---EecCcEEEeCCCCCCCCCCCccc
Q psy10327 168 KNPQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHR---IIPDFMCQGGDFTNHNGTGGKSI 244 (289)
Q Consensus 168 ~~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~R---v~~~f~iq~Gd~~~~~g~~~~~~ 244 (289)
.+++||+|+++.++++|+++++||.|..|+|++||..||+|+++++|++..||| .+++|++||||.+..+++++.++
T Consensus 2 ~~~~vf~d~~~~~~p~gr~~~~l~ad~~Pktaenf~al~tgekg~~yk~s~fhr~~~~~~~fm~qggDft~hngtggkSi 81 (167)
T KOG0865|consen 2 VNPTVFFDIAIDGEPLGRIVFELFADKIPKTAENFRALCTGEKGFGYKGSCFHRLIPIIPGFMCQGGDFTCHNGTGGKSI 81 (167)
T ss_pred CCCeeeeeeeecCccccccceecccccCcchHhhhhhcccCCCccccccchhhhccccccceeeccCcccccCCccceEe
Confidence 578999999999999999999999999999999999999999999999999999 33479999999999999999999
Q ss_pred CCCCCCCCcCCCCCCCCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 245 YGNKFEDENFILKHTGPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 245 ~~~~~~~e~~~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
|+++|+||++.++|..+|.|||||.+||+|+|||||++....|||
T Consensus 82 y~ekF~DenFilkhtgpGiLSmaNagpntngsqffictaktewLd 126 (167)
T KOG0865|consen 82 YGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLD 126 (167)
T ss_pred cccccCCcCcEEecCCCCeeehhhcCCCccccEEEEEcccccccc
Confidence 999999999999999999999999999999999999999999998
No 39
>PRK10791 peptidyl-prolyl cis-trans isomerase B (rotamase B); Provisional
Probab=99.96 E-value=1.5e-29 Score=211.82 Aligned_cols=103 Identities=30% Similarity=0.498 Sum_probs=87.9
Q ss_pred EEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCCCCCcCCCCCCC
Q psy10327 181 QEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTG 260 (289)
Q Consensus 181 t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~~~e~~~~~~~~ 260 (289)
|+.|+|+|+||.+.||+||+||++|| +.+| |+++.||||+|+|+||||++..+.+. ..++..+++|.....++.
T Consensus 6 T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Yd~~~fhRvi~~f~iQgGd~~~~~~~---~~~~~~~~~e~~~~~~~~ 79 (164)
T PRK10791 6 TNHGDIVIKTFDDKAPETVKNFLDYC--REGF-YNNTIFHRVINGFMIQGGGFEPGMKQ---KATKEPIKNEANNGLKNT 79 (164)
T ss_pred EccccEEEEEeCCCCcHHHHHHHHHH--hcCC-cCCcEEEEEecCcEEEeCCcCCCCCc---CCCCCCcCCcccccccCC
Confidence 99999999999999999999999999 7899 99999999999999999997533222 223556777754444457
Q ss_pred CcEEEEecCC-CCCCCceEEEEcCCCCCCC
Q psy10327 261 PGVLSMANSG-PNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 261 ~G~v~ma~~~-~~s~~sqFfI~l~~~~~LD 289 (289)
+|+||||+.+ |++++|||||+++++++||
T Consensus 80 ~G~lsma~~~~p~s~~SQFfI~~~~~~~ld 109 (164)
T PRK10791 80 RGTLAMARTQAPHSATAQFFINVVDNDFLN 109 (164)
T ss_pred CcEEEECCCCCcCCccceEEEEecCchhhc
Confidence 9999999986 9999999999999999886
No 40
>KOG0883|consensus
Probab=99.96 E-value=1e-30 Score=236.12 Aligned_cols=116 Identities=24% Similarity=0.356 Sum_probs=105.5
Q ss_pred eeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccC--CcccCCCCCccccc-------
Q psy10327 8 QEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLK--SRFSNLGGLAEEVD------- 78 (289)
Q Consensus 8 t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~--g~~~~~~~~~~e~~------- 78 (289)
|..|++-|||++|.+|++|+||+.|| +.|| |+|+.|||.|.+|||||||++++| |+||||..|.||..
T Consensus 284 Tn~G~lNlELhcd~~P~aceNFI~lc--~~gY-Ynnt~FHRsIrnFmiQGGDPTGTG~GGeSiWgKpFkDEf~~~l~H~g 360 (518)
T KOG0883|consen 284 TNHGPLNLELHCDYAPRACENFITLC--KNGY-YNNTIFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDEFCSNLSHDG 360 (518)
T ss_pred ccCCceeeEeecCcchHHHHHHHHHH--hccc-ccchHHHHHHHHHeeeCCCCCCCCCCCccccCCccccccCCCCCcCC
Confidence 78899999999999999999999999 9999 999999999999999999999874 89999999999973
Q ss_pred hhhhhccc---CCCCCe-EEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 79 DKVLNAAF---IPFGDL-VDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 79 ~g~~~~~~---~~~Gs~-fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
+|+++||+ .+|||| ||+..++-+||++|++||||++ +|+|.+|+..+.
T Consensus 361 RGvlSMANsGpnTNgSQFFItyrsckhLd~KHTIFGrvVGGldtL~amEnve~ 413 (518)
T KOG0883|consen 361 RGVLSMANSGPNTNGSQFFITYRSCKHLDNKHTIFGRVVGGLDTLTAMENVET 413 (518)
T ss_pred cceEeeccCCCCCCCceEEEEecchhhccccceeeeeeeccHHHHHHHhcCCC
Confidence 68888985 579995 5556689999999999999998 999999987655
No 41
>cd01921 cyclophilin_RRM cyclophilin_RRM: cyclophilin-type peptidylprolyl cis- trans isomerase domain occuring with a C-terminal RNA recognition motif domain (RRM). This subfamily of the cyclophilin domain family contains a number of eukaryotic cyclophilins having the RRM domain including the nuclear proteins: human hCyP-57, Arabidopsis thaliana AtCYP59, Caenorhabditis elegans CeCyP-44 and Paramecium tetrurelia Kin241. The Kin241 protein has been shown to have a role in cell morphogenesis.
Probab=99.96 E-value=1.6e-29 Score=212.40 Aligned_cols=117 Identities=20% Similarity=0.262 Sum_probs=95.6
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccC--CcccCC-------CCCcccc
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLK--SRFSNL-------GGLAEEV 77 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~--g~~~~~-------~~~~~e~ 77 (289)
.|+.|+|+||||.+.||+||+||++|| +.+| |+++.||||+|+|+|||||+...+ +.++|+ ..+++|.
T Consensus 3 ~Ts~G~i~ieL~~~~aP~t~~nF~~L~--~~~~-Y~g~~fhrvi~~f~iQgGd~~~~g~~~~~~~~~~~~~~~~~~~~e~ 79 (166)
T cd01921 3 ETTLGDLVIDLFTDECPLACLNFLKLC--KLKY-YNFCLFYNVQKDFIAQTGDPTGTGAGGESIYSQLYGRQARFFEPEI 79 (166)
T ss_pred EeccCCEEEEEcCCCCCHHHHHHHHHH--hcCC-cCCCEEEEEeCCceEEECCcCCCCCCCcccccccccccCcccCccc
Confidence 489999999999999999999999999 7889 999999999999999999987543 455543 2344443
Q ss_pred -------chhhhhccc---CCCCCeEEe-cCC-CCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 78 -------DDKVLNAAF---IPFGDLVDI-QMP-LDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 78 -------~~g~~~~~~---~~~Gs~fii-~~~-~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
.+|+++|+. .++||+|+| +.+ +|+||++|+|||||++ ||||++|+..+.
T Consensus 80 ~~~~~h~~~G~l~ma~~~~~~~~SQFfIt~~~~~~~Ldg~~tvFG~Vi~G~dvv~~I~~~~~ 141 (166)
T cd01921 80 LPLLKHSKKGTVSMVNAGDNLNGSQFYITLGENLDYLDGKHTVFGQVVEGFDVLEKINDAIV 141 (166)
T ss_pred CCccccCCceEEEEeECCCCCccceEEEEcCCCCcccCCCccEEEEEEcCHHHHHHHHcCCC
Confidence 368888983 346775544 544 7999999999999998 999999987544
No 42
>cd01924 cyclophilin_TLP40_like cyclophilin_TLP40_like: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) similar ot the Spinach thylakoid lumen protein TLP40. Compared to the archetypal cyclophilin Human cyclophilin A, these proteins have similar peptidylprolyl cis- trans isomerase activity and reduced affinity for cyclosporin A. Spinach TLP40 has been shown to have a dual function as a folding catalyst and regulator of dephosphorylation.
Probab=99.96 E-value=7.5e-29 Score=209.85 Aligned_cols=107 Identities=36% Similarity=0.529 Sum_probs=90.2
Q ss_pred cEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCC--------------------C
Q psy10327 180 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNG--------------------T 239 (289)
Q Consensus 180 ~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g--------------------~ 239 (289)
.|+.|+|+||||++.||+||+||++|| +.+| |+++.||||+|+|||||||+...+. .
T Consensus 3 ~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Ydg~~FhRVi~~fviQgGdp~~~~~~~~~~~~~~~~~~p~e~~~~~ 79 (176)
T cd01924 3 ATDNGTITIVLDGYNAPVTAGNFVDLV--ERGF-YDGMEFHRVEGGFVVQTGDPQGKNPGFPDPETGKSRTIPLEIKPEG 79 (176)
T ss_pred ccccceEEEEEcCCCCCHHHHHHHHHH--HhCC-cCCCEEEEecCCcEEEecCCCCCCCCcccccccccccccceecccC
Confidence 488999999999999999999999999 8899 9999999999999999999864310 1
Q ss_pred CCcccCCCCC-----CCCcCCCCCCCCcEEEEecCC--CCCCCceEEEEcC-------CCCCCC
Q psy10327 240 GGKSIYGNKF-----EDENFILKHTGPGVLSMANSG--PNTNGSQFFLCTT-------KTEWNI 289 (289)
Q Consensus 240 ~~~~~~~~~~-----~~e~~~~~~~~~G~v~ma~~~--~~s~~sqFfI~l~-------~~~~LD 289 (289)
.+.++++..+ .++...+.|+++|+|||||++ ||+++|||||+++ ++||||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laMa~~~~~~ns~~SQFfI~~~~~~~~~~~~~~Ld 143 (176)
T cd01924 80 QKQPVYGKTLEEAGRYDEQPVLPFNAFGAIAMARTEFDPNSASSQFFFLLKDNELTPSRNNVLD 143 (176)
T ss_pred CCCCccCcccccccccccccccccCCCCeEEEccCCCCCCCccceEEEEeccccccCCCCCccC
Confidence 1234555443 245567788899999999988 7999999999998 789997
No 43
>cd01920 cyclophilin_EcCYP_like cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E. coli cyclophilin A and Streptomyces antibioticus SanCyp18. Compared to the archetypal cyclophilin Human cyclophilin A, these have reduced affinity for cyclosporin A. E. coli cyclophilin A has a similar peptidylprolyl cis- trans isomerase activity to the human cyclophilin A. Most members of this subfamily contain a phenylalanine residue at the position equivalent to Human cyclophilin W121, where a tyrptophan has been shown to be important for cyclophilin binding.
Probab=99.96 E-value=2.8e-29 Score=208.64 Aligned_cols=117 Identities=21% Similarity=0.252 Sum_probs=98.0
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccCCcccCCCCCcccc------chh
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLKSRFSNLGGLAEEV------DDK 80 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~g~~~~~~~~~~e~------~~g 80 (289)
.|+.|+|+||||.+.||+||+||++|| +.|| |+++.||||+|+||+||||+....+...++..+++|. .+|
T Consensus 3 ~T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Yd~~~fhRvi~~f~iQ~Gd~~~~~~~~~~~~~~~~e~~~~~~~~~G 79 (155)
T cd01920 3 QTSLGDIVVELYDDKAPITVENFLAYV--RKGF-YDNTIFHRVISGFVIQGGGFTPDLAQKETLKPIKNEAGNGLSNTRG 79 (155)
T ss_pred EecceeEEEEEeCCCCcHHHHHHHHHH--hcCC-CCCCEEEEEeCCcEEEeCCCCCCCCccccCCcccCcccccccCCce
Confidence 378999999999999999999999999 8899 9999999999999999999876554444455555553 468
Q ss_pred hhhccc----CCCCC-eEEecCCCCCCCC-----CCCccceEEE-eccccCcccccC
Q psy10327 81 VLNAAF----IPFGD-LVDIQMPLDYETE-----KHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 81 ~~~~~~----~~~Gs-~fii~~~~p~ldg-----~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
+++|+. .++|| |||++.+.|+||+ +|+|||||++ ||||++|+..+.
T Consensus 80 ~v~ma~~~~~~s~~SqFfI~~~~~~~ld~~~~~~~ytvFG~V~eG~dvl~~I~~~~~ 136 (155)
T cd01920 80 TIAMARTNAPDSATSQFFINLKDNASLDYQNEQWGYTVFGEVTEGMDVVDKIAGVET 136 (155)
T ss_pred EEEECCCCCCCCccceEEEECCCchhcCCcccCCCccEEEEEecCHHHHHHHHcCCc
Confidence 999984 34566 6666778999995 7999999998 999999987555
No 44
>KOG0884|consensus
Probab=99.95 E-value=3.3e-29 Score=193.13 Aligned_cols=116 Identities=22% Similarity=0.286 Sum_probs=102.1
Q ss_pred eeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceecccccccc--CCcccCCCCCccccc-------
Q psy10327 8 QEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSL--KSRFSNLGGLAEEVD------- 78 (289)
Q Consensus 8 t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~--~g~~~~~~~~~~e~~------- 78 (289)
|..|+|.||||.+.+|+||+||+.|| ...| |++++|||-+|+|++|+||++.+ ||.||||.+|+||..
T Consensus 7 t~~gdikiev~~e~tpktce~~l~~~--~~~~-~n~~~~~~~~~~f~v~~~~~~~tgrgg~siwg~~fede~~~~lkh~~ 83 (161)
T KOG0884|consen 7 TDVGDIKIEVFCERTPKTCENFLALC--ASDY-YNGCIFHRNIKGFMVQTGDPTHTGRGGNSIWGKKFEDEYSEYLKHNV 83 (161)
T ss_pred eccCcEEEEEEecCChhHHHHHHHHh--hhhh-ccceeecCCCCCcEEEeCCCCCCCCCCccccCCcchHHHHHHHhhcc
Confidence 67899999999999999999999999 7788 99999999999999999998765 589999999999973
Q ss_pred hhhhhccc---CCCCCe-EEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 79 DKVLNAAF---IPFGDL-VDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 79 ~g~~~~~~---~~~Gs~-fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
+|+++||+ .+|||+ ||+-..+||||.||+|||+||. ++.++.|+.-+.
T Consensus 84 rg~vsmanngp~tn~sqffity~kq~hldmkytvfgkvidg~etldele~l~v 136 (161)
T KOG0884|consen 84 RGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPV 136 (161)
T ss_pred ceeEEcccCCCCCCCceEEEEecCCCccceeEeeeeeeccchhhHHHHhhccc
Confidence 67888884 468885 5556689999999999999997 999888876544
No 45
>PRK10903 peptidyl-prolyl cis-trans isomerase A (rotamase A); Provisional
Probab=99.95 E-value=8.9e-29 Score=211.73 Aligned_cols=117 Identities=18% Similarity=0.281 Sum_probs=97.8
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccCCcccCCCCCcccc------chh
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLKSRFSNLGGLAEEV------DDK 80 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~g~~~~~~~~~~e~------~~g 80 (289)
.|+.|+|+||||.+.||+||+||++|| +.|| |+|+.||||+|+|++|||++....+...++..+++|. .+|
T Consensus 34 ~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Ydg~~FhRvi~~f~iQgG~~~~~~~~~~~~~~~~~e~~~~l~~~~G 110 (190)
T PRK10903 34 TTSAGNIELELNSQKAPVSVKNFVDYV--NSGF-YNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEADNGLRNTRG 110 (190)
T ss_pred EeccccEEEEEeCCCCcHHHHHHHHHH--hcCC-cCCcEEEEEeCCceEEeCCcCCCCCCCCCCCcccCcccccCcCCCc
Confidence 489999999999999999999999999 8899 9999999999999999999765544344455566653 368
Q ss_pred hhhccc----CCCCC-eEEecCCCCCCCC-----CCCccceEEE-eccccCcccccC
Q psy10327 81 VLNAAF----IPFGD-LVDIQMPLDYETE-----KHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 81 ~~~~~~----~~~Gs-~fii~~~~p~ldg-----~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
+++|+. .++|| |||++.+.|+||+ +|+|||||++ ||||++|+....
T Consensus 111 ~lama~~~~~~sn~SQFfIt~~~~~~ld~~~~dg~ytvFG~V~eG~dvl~~I~~~~~ 167 (190)
T PRK10903 111 TIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPT 167 (190)
T ss_pred EEEeCCCCCCCCcccEEEEECcCcccccCCccCCCccEEEEEecCHHHHHHHHcCCC
Confidence 999984 34667 6666778999984 9999999998 999999987544
No 46
>PRK10791 peptidyl-prolyl cis-trans isomerase B (rotamase B); Provisional
Probab=99.95 E-value=1.1e-28 Score=206.70 Aligned_cols=117 Identities=21% Similarity=0.267 Sum_probs=94.5
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccCCcccCCCCCcccc------chh
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLKSRFSNLGGLAEEV------DDK 80 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~g~~~~~~~~~~e~------~~g 80 (289)
.|+.|+|+||||.+.||+||+||++|| +.|| |+++.||||+|+|+|||||...+.+...++..+++|. .+|
T Consensus 5 ~T~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Yd~~~fhRvi~~f~iQgGd~~~~~~~~~~~~~~~~e~~~~~~~~~G 81 (164)
T PRK10791 5 HTNHGDIVIKTFDDKAPETVKNFLDYC--REGF-YNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRG 81 (164)
T ss_pred EEccccEEEEEeCCCCcHHHHHHHHHH--hcCC-cCCcEEEEEecCcEEEeCCcCCCCCcCCCCCCcCCcccccccCCCc
Confidence 589999999999999999999999999 8899 9999999999999999998754433333444555553 368
Q ss_pred hhhccc----CCCCC-eEEecCCCCCCC-------C-CCCccceEEE-eccccCcccccC
Q psy10327 81 VLNAAF----IPFGD-LVDIQMPLDYET-------E-KHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 81 ~~~~~~----~~~Gs-~fii~~~~p~ld-------g-~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
+++|+. .++|| |||++.+.++|| + +|+|||||++ ||||++|+....
T Consensus 82 ~lsma~~~~p~s~~SQFfI~~~~~~~ld~~~~~~d~~~~tvFG~V~eG~dvl~~I~~~~~ 141 (164)
T PRK10791 82 TLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVAT 141 (164)
T ss_pred EEEECCCCCcCCccceEEEEecCchhhcccccccCCCCccEEEEEecCHHHHHHHHcCcC
Confidence 999984 34677 556566777776 3 7999999998 999999987443
No 47
>cd01924 cyclophilin_TLP40_like cyclophilin_TLP40_like: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) similar ot the Spinach thylakoid lumen protein TLP40. Compared to the archetypal cyclophilin Human cyclophilin A, these proteins have similar peptidylprolyl cis- trans isomerase activity and reduced affinity for cyclosporin A. Spinach TLP40 has been shown to have a dual function as a folding catalyst and regulator of dephosphorylation.
Probab=99.95 E-value=1.4e-28 Score=208.16 Aligned_cols=115 Identities=25% Similarity=0.271 Sum_probs=94.5
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccC----------------------
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLK---------------------- 64 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~---------------------- 64 (289)
.|+.|+|+||||.+.||+||+||+.|| +.+| |+++.||||+|+||+||||+...+
T Consensus 3 ~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Ydg~~FhRVi~~fviQgGdp~~~~~~~~~~~~~~~~~~p~e~~~~~ 79 (176)
T cd01924 3 ATDNGTITIVLDGYNAPVTAGNFVDLV--ERGF-YDGMEFHRVEGGFVVQTGDPQGKNPGFPDPETGKSRTIPLEIKPEG 79 (176)
T ss_pred ccccceEEEEEcCCCCCHHHHHHHHHH--HhCC-cCCCEEEEecCCcEEEecCCCCCCCCcccccccccccccceecccC
Confidence 578999999999999999999999999 8999 999999999999999999986442
Q ss_pred -CcccCCCCCc-----cc------cchhhhhccc-----CCCCC-eEEecC-------CCCCCCCCCCccceEEE-eccc
Q psy10327 65 -SRFSNLGGLA-----EE------VDDKVLNAAF-----IPFGD-LVDIQM-------PLDYETEKHQLFGRIIR-VNLA 118 (289)
Q Consensus 65 -g~~~~~~~~~-----~e------~~~g~~~~~~-----~~~Gs-~fii~~-------~~p~ldg~~~vFG~Vi~-mdvv 118 (289)
+.++|+..+. ++ ..+|+++|+. .++|| |||++. +.|+||++|+|||||++ ||||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laMa~~~~~~ns~~SQFfI~~~~~~~~~~~~~~Ldg~ytVFG~VveG~dvl 159 (176)
T cd01924 80 QKQPVYGKTLEEAGRYDEQPVLPFNAFGAIAMARTEFDPNSASSQFFFLLKDNELTPSRNNVLDGRYAVFGYVTDGLDIL 159 (176)
T ss_pred CCCCccCcccccccccccccccccCCCCeEEEccCCCCCCCccceEEEEeccccccCCCCCccCCCceEEEEEecCHHHH
Confidence 2345544332 22 1469999983 34566 566666 78999999999999998 9999
Q ss_pred cCcccc
Q psy10327 119 KPQKVQ 124 (289)
Q Consensus 119 ~~i~~~ 124 (289)
++|+..
T Consensus 160 ~~I~~g 165 (176)
T cd01924 160 RELKVG 165 (176)
T ss_pred HhhcCC
Confidence 999864
No 48
>cd01925 cyclophilin_CeCYP16-like cyclophilin_CeCYP16-like: cyclophilin-type peptidylprolyl cis- trans isomerase) (PPIase) domain similar to Caenorhabditis elegans cyclophilin 16. C. elegans CeCYP-16, compared to the archetypal cyclophilin Human cyclophilin A has, a reduced peptidylprolyl cis- trans isomerase activity, is cyclosporin insensitive and shows an altered substrate preference favoring, hydrophobic, acidic or amide amino acids. Most members of this subfamily have a glutamate residue in the active site at the position equivalent to a tryptophan (W121 in Human cyclophilin A), which has been shown to be important for cyclophilin binding.
Probab=99.95 E-value=2.5e-28 Score=206.10 Aligned_cols=117 Identities=23% Similarity=0.324 Sum_probs=99.5
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceecccccccc--CCcccCCCCCcccc-------
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSL--KSRFSNLGGLAEEV------- 77 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~--~g~~~~~~~~~~e~------- 77 (289)
.|+.|+|+||||.+.||+||+||++|| +.+| |+++.||||+|+|++||||+.+. ++.++|+..+++|.
T Consensus 11 ~Ts~G~i~ieL~~~~~P~t~~nF~~L~--~~~~-Y~~~~f~Rvi~~f~iQgGd~~~~g~g~~s~~g~~~~~E~~~~~~~~ 87 (171)
T cd01925 11 KTTAGDIDIELWSKEAPKACRNFIQLC--LEGY-YDNTIFHRVVPGFIIQGGDPTGTGTGGESIYGEPFKDEFHSRLRFN 87 (171)
T ss_pred EEccccEEEEEeCCCChHHHHHHHHHH--hcCC-CCCCEEEEEcCCcEEEccccCCCCccCcccCCCccCcccccCcCCC
Confidence 589999999999999999999999999 8889 99999999999999999998644 46788888888774
Q ss_pred chhhhhccc---CCCCC-eEEecCCCCCCCCCCCccceEEE--eccccCcccccC
Q psy10327 78 DDKVLNAAF---IPFGD-LVDIQMPLDYETEKHQLFGRIIR--VNLAKPQKVQQT 126 (289)
Q Consensus 78 ~~g~~~~~~---~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~--mdvv~~i~~~~~ 126 (289)
.+|+++|+. .+++| |||++.+.|+||++|+|||||++ |+++++|+..+.
T Consensus 88 ~~G~l~ma~~g~~s~~sqFfIt~~~~~~ldg~~tvFG~V~g~~~~~v~~i~~~~~ 142 (171)
T cd01925 88 RRGLVGMANAGDDSNGSQFFFTLDKADELNNKHTLFGKVTGDTIYNLLKLAEVET 142 (171)
T ss_pred CCcEEEECcCCCCCcccEEEEEcCCCcccCCCceEEEEEEECcHHHHHHHhcCCc
Confidence 258888883 34566 66667789999999999999995 677888876444
No 49
>KOG0865|consensus
Probab=99.95 E-value=2e-28 Score=203.17 Aligned_cols=123 Identities=33% Similarity=0.543 Sum_probs=111.5
Q ss_pred CceeeCceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeee---cccceeccccccc---cCCcccCCCCCc
Q psy10327 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRI---IPDFVSFMTKHQS---LKSRFSNLGGLA 74 (289)
Q Consensus 1 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv---~~~~~iq~Gd~~~---~~g~~~~~~~~~ 74 (289)
||+++.++++||++++||.|..|+|++||..||||+++++|+++.|||+ +++||+||||++. ++|+|||+++|+
T Consensus 8 ~d~~~~~~p~gr~~~~l~ad~~Pktaenf~al~tgekg~~yk~s~fhr~~~~~~~fm~qggDft~hngtggkSiy~ekF~ 87 (167)
T KOG0865|consen 8 FDIAIDGEPLGRIVFELFADKIPKTAENFRALCTGEKGFGYKGSCFHRLIPIIPGFMCQGGDFTCHNGTGGKSIYGEKFD 87 (167)
T ss_pred eeeeecCccccccceecccccCcchHhhhhhcccCCCccccccchhhhccccccceeeccCcccccCCccceEecccccC
Confidence 7999999999999999999999999999999999999999999999993 3479999999864 468999999999
Q ss_pred ccc------chhhhhcc---cCCCCC-eEEecCCCCCCCCCCCccceEEE-eccccCccc
Q psy10327 75 EEV------DDKVLNAA---FIPFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKV 123 (289)
Q Consensus 75 ~e~------~~g~~~~~---~~~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~ 123 (289)
||+ .+|+|+|+ +.++|| |||++....||||+|+|||+|.+ |+++++|+.
T Consensus 88 DenFilkhtgpGiLSmaNagpntngsqffictaktewLdgkhVVfGkv~eGm~iv~a~e~ 147 (167)
T KOG0865|consen 88 DENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMDIVEAMER 147 (167)
T ss_pred CcCcEEecCCCCeeehhhcCCCccccEEEEEccccccccCceeEcCceEcccchhhhhhc
Confidence 998 36999998 457888 56667778999999999999998 999999987
No 50
>cd00317 cyclophilin cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP
Probab=99.94 E-value=1.4e-26 Score=190.56 Aligned_cols=104 Identities=57% Similarity=0.850 Sum_probs=92.5
Q ss_pred EEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCCCCCCCcCCCC-CC
Q psy10327 181 QEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGNKFEDENFILK-HT 259 (289)
Q Consensus 181 t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~~~~~e~~~~~-~~ 259 (289)
|+.|+|+||||.+.||++|+||++|| +.++ |+++.||||+|+++||+|++......+ +.++..+++|..... |+
T Consensus 4 T~~G~i~IeL~~~~~P~~~~nF~~l~--~~~~-Y~~~~f~rv~~~~~iq~Gd~~~~~~~~--~~~~~~~~~E~~~~~~~~ 78 (146)
T cd00317 4 TTKGRIVIELYGDEAPKTVENFLSLA--RGGF-YDGTTFHRVIPGFMIQGGDPTGTGGGG--SGPGYKFPDENFPLKYHH 78 (146)
T ss_pred eccCcEEEEEcCCCChHHHHHHHHHH--hcCC-cCCCEEEEEeCCCeEEECCCCCCCCCC--CcCCCccCCccccCcCcC
Confidence 78899999999999999999999999 6778 999999999999999999987543322 455678888877655 89
Q ss_pred CCcEEEEecCCCCCCCceEEEEcCCCCCCC
Q psy10327 260 GPGVLSMANSGPNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 260 ~~G~v~ma~~~~~s~~sqFfI~l~~~~~LD 289 (289)
++|+|+|++.++++++|||||+++++|+||
T Consensus 79 ~~G~v~~~~~~~~~~~sqF~Itl~~~~~ld 108 (146)
T cd00317 79 RRGTLSMANAGPNTNGSQFFITTAPTPHLD 108 (146)
T ss_pred CCcEEEEeeCCCCCcccEEEEECCCCcccC
Confidence 999999999999999999999999999997
No 51
>KOG0885|consensus
Probab=99.94 E-value=2.6e-27 Score=213.37 Aligned_cols=112 Identities=23% Similarity=0.337 Sum_probs=98.9
Q ss_pred CceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceecccccccc--CCcccCCCCCcccc------
Q psy10327 6 GKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSL--KSRFSNLGGLAEEV------ 77 (289)
Q Consensus 6 ~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~--~g~~~~~~~~~~e~------ 77 (289)
-.|..|+|.||||+..||++|.||++|| -.|| |+|+.|||++|+|++||||++++ ||+||||..|.+|.
T Consensus 17 l~TT~G~I~iELW~kE~P~acrnFiqKO--Gegy-y~nt~fhrlvp~f~~Qggdp~~~gtGgesiyg~~fadE~h~Rlrf 93 (439)
T KOG0885|consen 17 LKTTKGDIDIELWAKECPKACRNFIQLC--LEGY-YDNTEFHRLVPGFLVQGGDPTGTGTGGESIYGRPFADEFHPRLRF 93 (439)
T ss_pred EEeccCceeeeehhhhhhHHHHHHHHHH--Hhcc-ccCceeeeeccchhcccCCCCCCCCCccccccccchhhcCcceee
Confidence 3578999999999999999999999999 8999 99999999999999999999865 58999999999997
Q ss_pred -chhhhhcccC---CCCC-eEEecCCCCCCCCCCCccceEEE---eccccCc
Q psy10327 78 -DDKVLNAAFI---PFGD-LVDIQMPLDYETEKHQLFGRIIR---VNLAKPQ 121 (289)
Q Consensus 78 -~~g~~~~~~~---~~Gs-~fii~~~~p~ldg~~~vFG~Vi~---mdvv~~i 121 (289)
.+|++.|++. .||| ||+++.+.|||+++|++||+|++ ++++ +|
T Consensus 94 ~rrGlvgmana~~~~ngsqFfftl~~~~el~nk~tiFGKVtGdtIYn~l-ri 144 (439)
T KOG0885|consen 94 NRRGLVGMANAGNDDNGSQFFFTLGDTPELNNKHTIFGKVTGDTIYNML-RI 144 (439)
T ss_pred eccceeeecccCCCCCCceEEEEecCChHhcccCceeeeecchhhhhhh-hh
Confidence 3699999854 4677 66667799999999999999996 4544 44
No 52
>cd00317 cyclophilin cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP
Probab=99.93 E-value=1.8e-26 Score=189.87 Aligned_cols=117 Identities=27% Similarity=0.401 Sum_probs=97.7
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccCCc-ccCCCCCccccc-------
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLKSR-FSNLGGLAEEVD------- 78 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~g~-~~~~~~~~~e~~------- 78 (289)
.|+.|+|+||||.+.||++|+||++|| +.++ |+++.|||++|++++|+||+...++. +.++..+++|..
T Consensus 3 ~T~~G~i~IeL~~~~~P~~~~nF~~l~--~~~~-Y~~~~f~rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~E~~~~~~~~~ 79 (146)
T cd00317 3 DTTKGRIVIELYGDEAPKTVENFLSLA--RGGF-YDGTTFHRVIPGFMIQGGDPTGTGGGGSGPGYKFPDENFPLKYHHR 79 (146)
T ss_pred EeccCcEEEEEcCCCChHHHHHHHHHH--hcCC-cCCCEEEEEeCCCeEEECCCCCCCCCCCcCCCccCCccccCcCcCC
Confidence 467899999999999999999999999 7778 99999999999999999998765432 455666777653
Q ss_pred hhhhhcccC---CCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 79 DKVLNAAFI---PFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 79 ~g~~~~~~~---~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
.|+++|+.. .+++ |||++.+.|+||++|+|||||++ |++|++|+..+.
T Consensus 80 ~G~v~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~ 132 (146)
T cd00317 80 RGTLSMANAGPNTNGSQFFITTAPTPHLDGKHTVFGKVVEGMDVVDKIERGDT 132 (146)
T ss_pred CcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEeCCHHHHHHHHcCCC
Confidence 477777733 2355 66767789999999999999998 999999988666
No 53
>PF00160 Pro_isomerase: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; InterPro: IPR002130 Cyclophilin [] is the major high-affinity binding protein in vertebrates for the immunosuppressive drug cyclosporin A (CSA), but is also found in other organisms. It exhibits a peptidyl-prolyl cis-trans isomerase activity (5.2.1.8 from EC) (PPIase or rotamase). PPIase is an enzyme that accelerates protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides []. It is probable that CSA mediates some of its effects via an forming a tight complex with cyclophilin that inhibits the phosphatase activity of calcineurin [], []. Cyclophilin A is a cytosolic and highly abundant protein. The protein belongs to a family of isozymes, including cyclophilins B and C, and natural killer cell cyclophilin-related protein [, , ]. Major isoforms have been found throughout the cell, including the ER, and some are even secreted. The sequences of the different forms of cyclophilin-type PPIases are well conserved. Note: FKBP's, a family of proteins that bind the immunosuppressive drug FK506, are also PPIases, but their sequence is not at all related to that of cyclophilin (see IPR001179 from INTERPRO).; GO: 0003755 peptidyl-prolyl cis-trans isomerase activity, 0006457 protein folding; PDB: 1Z81_A 1IHG_A 1IIP_A 3PMP_B 3O7T_A 2B71_A 1QNG_A 1QNH_A 2HQJ_A 2RMC_G ....
Probab=99.93 E-value=4e-26 Score=189.60 Aligned_cols=121 Identities=30% Similarity=0.439 Sum_probs=98.7
Q ss_pred CceeeCceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccCC----cccCCCCCccc
Q psy10327 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLKS----RFSNLGGLAEE 76 (289)
Q Consensus 1 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~g----~~~~~~~~~~e 76 (289)
|||+.++ +|+|+||||.+.||++|+||++|| ..++ |+++.|||++|++++|+|++...+. ....+..+++|
T Consensus 2 ~~i~t~~--~G~i~ieL~~~~aP~~~~nF~~l~--~~~~-y~g~~f~ri~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~E 76 (155)
T PF00160_consen 2 VDIETSG--LGRIVIELFGDEAPKTVENFLRLC--TSGF-YDGTKFHRIIPNFVIQGGDPTGNGGYGREDSTGGEPIPDE 76 (155)
T ss_dssp EEEEETT--EEEEEEEEETTTSHHHHHHHHHHH--HTTS-STTEBEEEEETTTEEEESSTTTSSSSTSEEBTTBSCBSSS
T ss_pred EEEEeCC--ccCEEEEEeCCCCcHHHHhhehhh--cccc-cCCceeecccccceeeeeeccCCCCcccccccCccccccc
Confidence 3566544 999999999999999999999999 6778 9999999999999999999765432 12233456666
Q ss_pred c-------chhhhhcccC-----CCCC-eEEecCCCCCCCCCCCccceEEE-eccccCcccccC
Q psy10327 77 V-------DDKVLNAAFI-----PFGD-LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQT 126 (289)
Q Consensus 77 ~-------~~g~~~~~~~-----~~Gs-~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~~ 126 (289)
. .+|+++|+.. .+|| |||++.+.|+||++|+|||||++ |++|++|+..+.
T Consensus 77 ~~~~~~~~~~G~v~~~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~ 140 (155)
T PF00160_consen 77 FNPSLLKHRRGLVSMARSGKDPNSNGSQFFITLSDAPHLDGKYTVFGRVIEGMDVLDKIEAGPT 140 (155)
T ss_dssp GBTTSSSSSTTEEEEEBSSSSTTEBSSEEEEESSCGGGGTTTSEEEEEEEEHHHHHHHHHTSBB
T ss_pred cccccccccceeeeecccccCCCCCCceEEeeccCCCccccceeeeeEEehhHHHHHHHHCCCC
Confidence 5 4688888843 3455 77777788999999999999999 999999988655
No 54
>PF00160 Pro_isomerase: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; InterPro: IPR002130 Cyclophilin [] is the major high-affinity binding protein in vertebrates for the immunosuppressive drug cyclosporin A (CSA), but is also found in other organisms. It exhibits a peptidyl-prolyl cis-trans isomerase activity (5.2.1.8 from EC) (PPIase or rotamase). PPIase is an enzyme that accelerates protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides []. It is probable that CSA mediates some of its effects via an forming a tight complex with cyclophilin that inhibits the phosphatase activity of calcineurin [], []. Cyclophilin A is a cytosolic and highly abundant protein. The protein belongs to a family of isozymes, including cyclophilins B and C, and natural killer cell cyclophilin-related protein [, , ]. Major isoforms have been found throughout the cell, including the ER, and some are even secreted. The sequences of the different forms of cyclophilin-type PPIases are well conserved. Note: FKBP's, a family of proteins that bind the immunosuppressive drug FK506, are also PPIases, but their sequence is not at all related to that of cyclophilin (see IPR001179 from INTERPRO).; GO: 0003755 peptidyl-prolyl cis-trans isomerase activity, 0006457 protein folding; PDB: 1Z81_A 1IHG_A 1IIP_A 3PMP_B 3O7T_A 2B71_A 1QNG_A 1QNH_A 2HQJ_A 2RMC_G ....
Probab=99.92 E-value=3.7e-25 Score=183.77 Aligned_cols=112 Identities=46% Similarity=0.751 Sum_probs=91.4
Q ss_pred EEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCC-cccCCCCCCC
Q psy10327 173 YMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGG-KSIYGNKFED 251 (289)
Q Consensus 173 ~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~-~~~~~~~~~~ 251 (289)
|++|+.++ +|+|+||||.+.||++|+||++|| ..++ |+++.|||++|+++||+|++......+. ....+..+++
T Consensus 1 ~~~i~t~~--~G~i~ieL~~~~aP~~~~nF~~l~--~~~~-y~g~~f~ri~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~ 75 (155)
T PF00160_consen 1 FVDIETSG--LGRIVIELFGDEAPKTVENFLRLC--TSGF-YDGTKFHRIIPNFVIQGGDPTGNGGYGREDSTGGEPIPD 75 (155)
T ss_dssp EEEEEETT--EEEEEEEEETTTSHHHHHHHHHHH--HTTS-STTEBEEEEETTTEEEESSTTTSSSSTSEEBTTBSCBSS
T ss_pred CEEEEeCC--ccCEEEEEeCCCCcHHHHhhehhh--cccc-cCCceeecccccceeeeeeccCCCCcccccccCcccccc
Confidence 67777432 999999999999999999999999 6778 9999999999999999999865433111 1223446888
Q ss_pred CcC-CCCCCCCcEEEEecCC--CCCCCceEEEEcCCCCCCC
Q psy10327 252 ENF-ILKHTGPGVLSMANSG--PNTNGSQFFLCTTKTEWNI 289 (289)
Q Consensus 252 e~~-~~~~~~~G~v~ma~~~--~~s~~sqFfI~l~~~~~LD 289 (289)
|.. ...++++|+|+|++.+ +++++|||||+|+++||||
T Consensus 76 E~~~~~~~~~~G~v~~~~~~~~~~~~~sqF~I~l~~~~~ld 116 (155)
T PF00160_consen 76 EFNPSLLKHRRGLVSMARSGKDPNSNGSQFFITLSDAPHLD 116 (155)
T ss_dssp SGBTTSSSSSTTEEEEEBSSSSTTEBSSEEEEESSCGGGGT
T ss_pred ccccccccccceeeeecccccCCCCCCceEEeeccCCCccc
Confidence 874 3344479999999986 8999999999999999987
No 55
>KOG0415|consensus
Probab=99.90 E-value=3.6e-24 Score=191.86 Aligned_cols=106 Identities=41% Similarity=0.612 Sum_probs=96.2
Q ss_pred cEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCCCCCCCcccCCC-------CCCCC
Q psy10327 180 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGN-------KFEDE 252 (289)
Q Consensus 180 ~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~~g~~~~~~~~~-------~~~~e 252 (289)
+|++|+|+|+||.+.+|.+|.||++|| +..| |+.+.||.|..+|++|+|||+ ++|.||.++|+. .|+.|
T Consensus 6 eTtlGDlvIDLf~~erP~~clNFLKLC--k~KY-YN~clfh~vq~~f~aQTGDPt-GtG~GG~si~~~lyG~q~rffeaE 81 (479)
T KOG0415|consen 6 ETTLGDLVIDLFVKERPRTCLNFLKLC--KIKY-YNFCLFHTVQRDFTAQTGDPT-GTGDGGESIYGVLYGEQARFFEAE 81 (479)
T ss_pred EeecccEEeeeecccCcHHHHHHHHHH--hHhh-cccceeeeccccceeecCCCC-CCCCCcceeeeecccccchhhhhh
Confidence 399999999999999999999999999 8889 999999999999999999998 589999999874 34555
Q ss_pred c-CCCCCCCCcEEEEecCCCCCCCceEEEEcCCC-CCCC
Q psy10327 253 N-FILKHTGPGVLSMANSGPNTNGSQFFLCTTKT-EWNI 289 (289)
Q Consensus 253 ~-~~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~~-~~LD 289 (289)
. +.++|.+.|+|||++.|.|-+||||||||+++ .+||
T Consensus 82 ~~p~l~Hsk~G~vsmvs~g~n~~gSQF~iTlgenLdyLD 120 (479)
T KOG0415|consen 82 FLPKLKHSKMGTVSMVSAGENLNGSQFFITLGENLDYLD 120 (479)
T ss_pred hcccccccccceEEeecCCcccccceEEEEccccccccc
Confidence 4 47999999999999999999999999999886 5776
No 56
>KOG0415|consensus
Probab=99.87 E-value=5.2e-23 Score=184.48 Aligned_cols=115 Identities=22% Similarity=0.241 Sum_probs=97.2
Q ss_pred CceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccC--CcccCCC-------CCccc
Q psy10327 6 GKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLK--SRFSNLG-------GLAEE 76 (289)
Q Consensus 6 ~~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~--g~~~~~~-------~~~~e 76 (289)
..|.+|+|+|.||.+.+|+||.||+.|| +..| |+.|.||.|..+|++|+||++++| |.|||+- .|..|
T Consensus 5 ieTtlGDlvIDLf~~erP~~clNFLKLC--k~KY-YN~clfh~vq~~f~aQTGDPtGtG~GG~si~~~lyG~q~rffeaE 81 (479)
T KOG0415|consen 5 IETTLGDLVIDLFVKERPRTCLNFLKLC--KIKY-YNFCLFHTVQRDFTAQTGDPTGTGDGGESIYGVLYGEQARFFEAE 81 (479)
T ss_pred EEeecccEEeeeecccCcHHHHHHHHHH--hHhh-cccceeeeccccceeecCCCCCCCCCcceeeeecccccchhhhhh
Confidence 4689999999999999999999999999 8889 999999999999999999999874 7888862 24555
Q ss_pred cc-------hhhhhcccC---CCCCeEEecC--CCCCCCCCCCccceEEE-eccccCccc
Q psy10327 77 VD-------DKVLNAAFI---PFGDLVDIQM--PLDYETEKHQLFGRIIR-VNLAKPQKV 123 (289)
Q Consensus 77 ~~-------~g~~~~~~~---~~Gs~fii~~--~~p~ldg~~~vFG~Vi~-mdvv~~i~~ 123 (289)
.. .|+++|+.. .+||||++++ .+..|||+|+|||+|++ ||++.+|+.
T Consensus 82 ~~p~l~Hsk~G~vsmvs~g~n~~gSQF~iTlgenLdyLDg~htvfGqV~EG~dtl~kiNe 141 (479)
T KOG0415|consen 82 FLPKLKHSKMGTVSMVSAGENLNGSQFFITLGENLDYLDGKHTVFGQVAEGFDTLTKINE 141 (479)
T ss_pred hcccccccccceEEeecCCcccccceEEEEccccccccccccceeeehhhhHHHHHHHHH
Confidence 42 477777632 4688666655 48899999999999998 999999864
No 57
>TIGR03268 methan_mark_3 putative methanogenesis marker protein 3. A single member of this protein family is found in each of the first ten complete genome sequences of archaeal methanogens, and nowhere else. This protein family was detected by the method of partial phylogenetic profiling (see Haft, et al., 2006). The functions of proteins in this family are unknown, but their role is likely one essential to methanogenesis.
Probab=97.61 E-value=0.0019 Score=62.08 Aligned_cols=98 Identities=15% Similarity=0.194 Sum_probs=59.5
Q ss_pred eeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccCCcccCCCCCcccc----chhhhhc
Q psy10327 9 EVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLKSRFSNLGGLAEEV----DDKVLNA 84 (289)
Q Consensus 9 ~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~g~~~~~~~~~~e~----~~g~~~~ 84 (289)
-.=.+.+||..+ +|++++.|+++. +.|. + ...+...-|+ +| .+..+...+.|+ .+|.+..
T Consensus 199 IfTy~evE~~~~-~p~s~EH~la~~--~~G~-~---~Vd~~tsTfi---~d------~~L~g~~~p~En~~~R~rGtVTV 262 (503)
T TIGR03268 199 IFTYVEVELDPN-APVSVEHFLALM--EDGT-F---RVDYRTSTFI---SD------DSLRGLDKPEENIEKRRRGAVTV 262 (503)
T ss_pred EEEEEEEEEcCC-CChhHHHHHHHH--hCCe-E---EEeeeecceE---ec------ccccCccCCccccCcccceeEEE
Confidence 344678887665 999999999999 7775 1 1111111111 11 111222334443 3677777
Q ss_pred ccCCCCC--eEEecCCCCCCCCCCCccceEEE-eccccCccc
Q psy10327 85 AFIPFGD--LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKV 123 (289)
Q Consensus 85 ~~~~~Gs--~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~ 123 (289)
.+.-.|+ .||-..+.+. .-.|+|+|||++ |+.++--+.
T Consensus 263 Rn~G~G~G~VYIYredr~s-s~sHtvVG~V~~GiELid~a~~ 303 (503)
T TIGR03268 263 RNSGVGEGRVYIYREDRPS-SLSHNVVGHVTRGIELIDIAQE 303 (503)
T ss_pred EeeccCceeEEEEcCCCCC-CcccceeEEEecceeeeecccC
Confidence 6665555 8888765443 246999999997 988865444
No 58
>PRK00969 hypothetical protein; Provisional
Probab=97.53 E-value=0.0029 Score=60.93 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=59.2
Q ss_pred eeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccCCcccCCCCCcccc----chhhhhc
Q psy10327 9 EVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLKSRFSNLGGLAEEV----DDKVLNA 84 (289)
Q Consensus 9 ~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~g~~~~~~~~~~e~----~~g~~~~ 84 (289)
-.=.+.+||..+ +|++++.|+++. +.|. ++ ..+....|+ +|. +..+...+.|+ .+|.+..
T Consensus 202 IfTy~eve~~~~-~p~s~EH~la~~--~~G~-f~---Vd~~tstfI---~d~------~L~g~~~p~En~~~R~~GtVTV 265 (508)
T PRK00969 202 IFTYVEVELDPG-APKSVEHFLALL--EDGT-FE---VDFETSTFI---ADD------RLQGLKIPEENFEPRRRGTVTV 265 (508)
T ss_pred EEEEEEEEEcCC-CCchHHHHHHHH--hCCe-EE---EeeeecceE---eec------cccCccCCccccCccccceEEE
Confidence 344677888776 999999999999 7775 11 111111111 111 11222334443 3577776
Q ss_pred ccCCCCC--eEEecCCCCCCCCCCCccceEEE-eccccCccc
Q psy10327 85 AFIPFGD--LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKV 123 (289)
Q Consensus 85 ~~~~~Gs--~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~ 123 (289)
.+.-.|+ .||-..+.|. .-.|+|.|+|++ |+.++--+.
T Consensus 266 Rt~G~g~G~vYIyredr~s-s~sHtvVG~V~~GiELi~~a~~ 306 (508)
T PRK00969 266 RTAGVGVGKVYIYREDRPS-SLSHTVVGRVTHGIELIDFAKE 306 (508)
T ss_pred EeeccCceeEEEECCCCCC-CccceeEEEEecceeeeecccC
Confidence 6655544 8888765443 246999999997 988865444
No 59
>COG4070 Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family [Posttranslational modification, protein turnover, chaperones]
Probab=96.70 E-value=0.0052 Score=57.33 Aligned_cols=93 Identities=18% Similarity=0.285 Sum_probs=55.5
Q ss_pred eeeEEEEEEcCCCChHHHHHHHHhhccCCCc---ccCCCeeeeecccceeccccccccCCcccCCCCCcccc----chhh
Q psy10327 9 EVGRITIQLRYDLVPRTAENFRCLCTHEKGF---GYQGSSFHRIIPDFVSFMTKHQSLKSRFSNLGGLAEEV----DDKV 81 (289)
Q Consensus 9 ~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~---~Y~g~~f~rv~~~~~iq~Gd~~~~~g~~~~~~~~~~e~----~~g~ 81 (289)
-.=.+.+||-.+ +|++++.|++|. +.|. .|.-++|- ++. +....+.+.|+ ..|.
T Consensus 201 ifTy~eve~s~n-sP~saEH~lalm--edG~lri~~~tntfi----------s~~------~lq~~~~~~en~d~RerG~ 261 (512)
T COG4070 201 IFTYFEVELSRN-SPKSAEHFLALM--EDGTLRIDVTTNTFI----------SDD------TLQEEKVPEENFDLRERGA 261 (512)
T ss_pred EEEEEEEEeCCC-CchhHHHHHHHh--hcceEEEEEecccee----------ecc------ccccccCChhhhhhhhcce
Confidence 445678888886 999999999999 7764 12222221 111 11223444444 2455
Q ss_pred hhcccCCCCC--eEEecCCCCCCCCCCCccceEEE-eccccCc
Q psy10327 82 LNAAFIPFGD--LVDIQMPLDYETEKHQLFGRIIR-VNLAKPQ 121 (289)
Q Consensus 82 ~~~~~~~~Gs--~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i 121 (289)
+...+...|+ .+|-.-+.+. .-.|.|.|||++ |+.++--
T Consensus 262 iTvRn~GvgeGrvYIyRedR~s-s~sHnvVGrV~eGiELid~a 303 (512)
T COG4070 262 ITVRNVGVGEGRVYIYREDRPS-SLSHNVVGRVIEGIELIDLA 303 (512)
T ss_pred EEEEeeecccceEEEEecCCCC-ccccceeeeeecceEEEEec
Confidence 5554444444 6776554333 235889999997 8777543
No 60
>TIGR03268 methan_mark_3 putative methanogenesis marker protein 3. A single member of this protein family is found in each of the first ten complete genome sequences of archaeal methanogens, and nowhere else. This protein family was detected by the method of partial phylogenetic profiling (see Haft, et al., 2006). The functions of proteins in this family are unknown, but their role is likely one essential to methanogenesis.
Probab=96.37 E-value=0.0069 Score=58.31 Aligned_cols=101 Identities=22% Similarity=0.216 Sum_probs=54.4
Q ss_pred EEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccCCcccCCCCCcccc-ch---hhhhcc--
Q psy10327 12 RITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLKSRFSNLGGLAEEV-DD---KVLNAA-- 85 (289)
Q Consensus 12 ~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~g~~~~~~~~~~e~-~~---g~~~~~-- 85 (289)
-|.|+||++.||+|+.-|+++. |-.-..---..+|-..++.++.=|+... ...+..+..|... .. |+-.|+
T Consensus 376 vi~IeLydd~AP~s~~yFRk~t-GL~~~~VG~L~v~F~~~d~~mFk~~~~~--~k~LiPEN~P~~~V~ag~IgvTN~a~k 452 (503)
T TIGR03268 376 VIEIELYDDNAPRSVWYFRKFT-GLKTKPVGRLPVHFAFKEMIMFKGNKEL--AKGLIPENTPEDKVEAGVIGVTNQACK 452 (503)
T ss_pred EEEEEEcccCCchHHHHHHHhc-CCcccccceeEEEEEeCCeeEeccCchh--ccccCCCCCCCCccccceEeeechhhh
Confidence 5899999999999999999876 1110001113445455554333222111 1122222222221 12 233333
Q ss_pred --------------cCCCCCeEEecCCCCCCCCCCCccceEEE-eccccCccccc
Q psy10327 86 --------------FIPFGDLVDIQMPLDYETEKHQLFGRIIR-VNLAKPQKVQQ 125 (289)
Q Consensus 86 --------------~~~~Gs~fii~~~~p~ldg~~~vFG~Vi~-mdvv~~i~~~~ 125 (289)
|.|+| ..++|.++| |||++ ++.|++++.++
T Consensus 453 ~~G~IGVRl~d~defGPTG---------E~F~gTNIi-G~Vv~~~e~Lk~~KeGd 497 (503)
T TIGR03268 453 HVGMIGVRLEDSDEFGPTG---------EPFSGTNII-GRVVEGMERLKGLKEGD 497 (503)
T ss_pred cCceEEEEccCCcccCCCC---------CCccCcceE-EEecCChhHhcccccCc
Confidence 33333 235666655 99997 99999988754
No 61
>PRK00969 hypothetical protein; Provisional
Probab=95.57 E-value=0.45 Score=46.28 Aligned_cols=216 Identities=16% Similarity=0.212 Sum_probs=105.9
Q ss_pred ceeeeEEEEEEcCCCChHHHHHHHHhhccCCCcccCCCeeeeecccceeccccccccCCcccCCCCCccccchhhhhcc-
Q psy10327 7 KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKHQSLKSRFSNLGGLAEEVDDKVLNAA- 85 (289)
Q Consensus 7 ~t~~G~i~ieL~~~~aP~t~~nF~~l~~g~~g~~Y~g~~f~rv~~~~~iq~Gd~~~~~g~~~~~~~~~~e~~~g~~~~~- 85 (289)
.|+.|.|+|||. ....++.-++.-+ +. |.|...|=-.++-+..| -+. .+ +-...-+.+..++-+.+.
T Consensus 56 kTtkG~i~Iel~--~~~~~~~~w~e~y--k~---~e~~~i~W~s~~~vAfG-p~~-s~---l~p~~~~~~y~r~DV~lg~ 123 (508)
T PRK00969 56 KTTKGEIVIELT--EENESVDFWLENY--KE---FEGKSLRWTSRSAVAFG-PFE-SD---LEPSREEYEYERWDVVLSL 123 (508)
T ss_pred EccCceEEEEEc--cCcchhhHHHHhH--Hh---hcCCceEeccccceeEc-ccc-cC---cccccCcceeecccEEEEc
Confidence 478999999999 3555666666655 33 56666654444433332 111 10 000000111112222221
Q ss_pred --cCCCCCeEEecCCCCCCC--C--CCCccceEEE-eccccCcccccC--CCcccccchhhhhhccCCCCCCCCCCChhh
Q psy10327 86 --FIPFGDLVDIQMPLDYET--E--KHQLFGRIIR-VNLAKPQKVQQT--SSKPVWASDTWLQKHAGETLDPENQIDPAE 156 (289)
Q Consensus 86 --~~~~Gs~fii~~~~p~ld--g--~~~vFG~Vi~-mdvv~~i~~~~~--~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~ 156 (289)
|.+--+.+|+. ..+|.. | .--+||+|+. ..+++++...+. +-.||....+.........+
T Consensus 124 ~G~dp~~thLIfs-k~~h~a~YG~p~~gv~grVi~Gk~vl~~L~~~D~I~sIEPVie~~e~~~~~~TtDl---------- 192 (508)
T PRK00969 124 SGFDPSETHLIFS-KRDHSADYGAPNDGVIGRVVGGKRVLDRLTDGDRIISIEPVIEWKETSDYLVTTDL---------- 192 (508)
T ss_pred cCCCCCCceEEEE-ecchhhhhCCCCCCceEEEccchhhHhhccCCCeEEEEeeeEEehhcccceEEecC----------
Confidence 33322222221 111110 1 1279999997 999999887655 33333332222111111111
Q ss_pred hhhccCCCCCCCCCeEEEEEEECcEEeeEEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecCcEEEeCCCCCC
Q psy10327 157 KLAASIDPKTKKNPQVYMDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFMCQGGDFTNH 236 (289)
Q Consensus 157 ~~~~~~~~~~~~~~~v~~~i~v~~t~~G~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~f~iq~Gd~~~~ 236 (289)
.-......++|-. +.+|| ...||.+++.|+.+. +.|. + .+-+....|+.
T Consensus 193 ------~~~LEdG~~IfTy----------~eve~-~~~~p~s~EH~la~~--~~G~-f---~Vd~~tstfI~-------- 241 (508)
T PRK00969 193 ------STVLEDGMKIFTY----------VEVEL-DPGAPKSVEHFLALL--EDGT-F---EVDFETSTFIA-------- 241 (508)
T ss_pred ------CccccCCCEEEEE----------EEEEE-cCCCCchHHHHHHHH--hCCe-E---EEeeeecceEe--------
Confidence 1112333444544 33577 668999999999999 6775 1 11112112221
Q ss_pred CCCCCcccCCCCCCCCcCCCCCCCCcEEEEecCCCCCCCceEEEEcCC
Q psy10327 237 NGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTNGSQFFLCTTK 284 (289)
Q Consensus 237 ~g~~~~~~~~~~~~~e~~~~~~~~~G~v~ma~~~~~s~~sqFfI~l~~ 284 (289)
..+..|...+.|++.. .++|+|.+-+.|.++.. -||-..+
T Consensus 242 ----d~~L~g~~~p~En~~~--R~~GtVTVRt~G~g~G~--vYIyred 281 (508)
T PRK00969 242 ----DDRLQGLKIPEENFEP--RRRGTVTVRTAGVGVGK--VYIYRED 281 (508)
T ss_pred ----eccccCccCCccccCc--cccceEEEEeeccCcee--EEEECCC
Confidence 1223344555665533 34799999887765443 5665443
No 62
>COG4070 Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family [Posttranslational modification, protein turnover, chaperones]
Probab=94.39 E-value=0.07 Score=50.03 Aligned_cols=22 Identities=36% Similarity=0.371 Sum_probs=20.4
Q ss_pred EEEEEEcCCCChHHHHHHHHhh
Q psy10327 12 RITIQLRYDLVPRTAENFRCLC 33 (289)
Q Consensus 12 ~i~ieL~~~~aP~t~~nF~~l~ 33 (289)
-|+||||.+.||+++.-|+++.
T Consensus 377 iieIELyed~APrSv~yFRr~t 398 (512)
T COG4070 377 IIEIELYEDRAPRSVWYFRRST 398 (512)
T ss_pred EEEEEecCCCCchhhHHHHhhc
Confidence 4899999999999999999876
No 63
>PF12903 DUF3830: Protein of unknown function (DUF3830); InterPro: IPR024532 This is a family of bacterial and archaeal proteins. The structure of one of family members, A0JVT3 from SWISSPROT, has been characterised and shown to contain a cyclophilin-like fold.; PDB: 3KOP_B.
Probab=65.50 E-value=7.8 Score=31.80 Aligned_cols=23 Identities=26% Similarity=0.221 Sum_probs=18.8
Q ss_pred eEEEEEEcCCCChHHHHHHHHhh
Q psy10327 11 GRITIQLRYDLVPRTAENFRCLC 33 (289)
Q Consensus 11 G~i~ieL~~~~aP~t~~nF~~l~ 33 (289)
-.++.+|..|.||+||+-|.++=
T Consensus 8 ~~~~A~l~~d~AP~Tcaa~~~~L 30 (147)
T PF12903_consen 8 VSFTARLLDDKAPKTCAAFWEAL 30 (147)
T ss_dssp EEEEEEE-TTTSHHHHHHHHHH-
T ss_pred eEEEEEEcccCChHHHHHHHHhC
Confidence 36889999999999999999865
No 64
>PF12903 DUF3830: Protein of unknown function (DUF3830); InterPro: IPR024532 This is a family of bacterial and archaeal proteins. The structure of one of family members, A0JVT3 from SWISSPROT, has been characterised and shown to contain a cyclophilin-like fold.; PDB: 3KOP_B.
Probab=53.35 E-value=14 Score=30.35 Aligned_cols=42 Identities=21% Similarity=0.201 Sum_probs=27.1
Q ss_pred EEEEEEecCCCchhHHHHHHhhhccCCccccCCceEEEecC--cEEEeCC
Q psy10327 185 RITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPD--FMCQGGD 232 (289)
Q Consensus 185 ~i~ieL~~~~aP~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~--f~iq~Gd 232 (289)
.++.+|..|.||+||+.|.++- . |.+..+|-..-+ .++.-++
T Consensus 9 ~~~A~l~~d~AP~Tcaa~~~~L---P---~~~~~~HarwSG~ei~~~l~~ 52 (147)
T PF12903_consen 9 SFTARLLDDKAPKTCAAFWEAL---P---LKGKVIHARWSGEEIWIPLPD 52 (147)
T ss_dssp EEEEEE-TTTSHHHHHHHHHH--------EEEE-EE-SSSSSEEEEEEE-
T ss_pred EEEEEEcccCChHHHHHHHHhC---C---CCCcEEEEEEECcEEEEECCC
Confidence 5789999999999999999875 2 666666665554 2444444
No 65
>PF06138 Chordopox_E11: Chordopoxvirus E11 protein; InterPro: IPR009201 This group represents a virion core protein, vaccinia E11L type.
Probab=29.22 E-value=2.7e+02 Score=22.25 Aligned_cols=48 Identities=17% Similarity=0.411 Sum_probs=34.3
Q ss_pred eEEEEEEECcEEeeEEEEEEecCC--Cc-------hhHHHHHHhhhccCCccccCCceEEEecC
Q psy10327 171 QVYMDIKIGKQEVGRITIQLRYDL--VP-------RTAENFRCLCTHEKGFGYQGSSFHRIIPD 225 (289)
Q Consensus 171 ~v~~~i~v~~t~~G~i~ieL~~~~--aP-------~~~~nF~~L~~g~~g~~Y~g~~f~Rv~~~ 225 (289)
.+||+ +..|++.+....+. +| ++++.|++.- ++-..-+-+.|+-|+++
T Consensus 5 NIfLE-----sd~grvkl~~~~~~~~c~~~~~~~~~Av~~Fl~~L--~kyI~veeStFylvvrd 61 (130)
T PF06138_consen 5 NIFLE-----SDSGRVKLRYEEPDCKCARTGCEARRAVKHFLSVL--KKYIDVEESTFYLVVRD 61 (130)
T ss_pred EEEEe-----ccCceeEEEEeCCCcccccccchHHHHHHHHHHHH--HhhEEecccEEEEEEec
Confidence 45666 88898777766444 22 3688999988 55444578899999987
Done!