BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10328
(560 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/551 (48%), Positives = 339/551 (61%), Gaps = 47/551 (8%)
Query: 21 AAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEG 80
A T FIGVLDIYGFETF+ N+FEQFCINYANEKLQQQFN HVFKLEQEEY++E
Sbjct: 422 ALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQ 481
Query: 81 IEWKFIDFYDNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
I W IDFYDNQPCI+LIE+K+G+LDLLDEECKMPKGSD +WA+KLY +K + F K
Sbjct: 482 IPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCAL-FEK 540
Query: 141 PRFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXG-AKRM 199
PR +F++KHFAD V Y GFLEKN+DTVYEEQI +L K +
Sbjct: 541 PRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAI 600
Query: 200 AALAASKTATLPSSK-------------SKQHKKTVGSQFRESLSLLMRTLNSTIPHYIR 246
+ +A+ + +P S+ SK+HKKTVG QFR SL LLM TLN+T PHY+R
Sbjct: 601 SPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVR 660
Query: 247 CIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIR 306
CIKPND K F F+ R +QQLRACGVLETIR
Sbjct: 661 CIKPNDFKFPFTFDEKRAVQQLRACGVLETIR---------------------------- 692
Query: 307 ISAAGFPSRWTYGEFYNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTK 366
ISAAGFPSRWTY EF++RYRVL +KQ + + + ++++ I D DKY+FGKTK
Sbjct: 693 ISAAGFPSRWTYQEFFSRYRVL---MKQKDV-LSDRKQTCKNVLEKLILDKDKYQFGKTK 748
Query: 367 IFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSILKSVATLQRWTRGYLARR 426
IFFR+GQVAYLEK+RA+KL+ CI IQK +R +L+RKKY+ + ++ T+QR+ RG+ AR
Sbjct: 749 IFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARC 808
Query: 427 LVLHMRRTRAAVRIQSAVRAFIRRRQYLRLRALVLGLQCAARGMXXXXXXXXXXXXXXXX 486
+RRTRAA+ IQ R ++ R++Y +R + LQ RG
Sbjct: 809 YATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSI 868
Query: 487 XIQTRVRGFLARRNYEATRAKIVICQASIXXXXXXXXXXXXXXXXXSVEHVKKLNKGLEN 546
IQ VRG+LAR +Y T IV Q SVE KKL+ GLEN
Sbjct: 869 IIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLEN 928
Query: 547 KIISMQQRIGD 557
KI+ +Q++I +
Sbjct: 929 KIMQLQRKIDE 939
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/430 (51%), Positives = 271/430 (63%), Gaps = 70/430 (16%)
Query: 21 AAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEG 80
A T FIGVLDIYGFETF+ N+FEQFCINYANEKLQQQFN HVFKLEQEEY++E
Sbjct: 422 ALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQ 481
Query: 81 IEWKFIDFYDNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
I W IDFYDNQPCI+LIE+K+G+LDLLDEECKMPKGSD +WA+KLY +K + F K
Sbjct: 482 IPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCAL-FEK 540
Query: 141 PRFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGA-KRM 199
PR +F++KHFAD V Y GFLEKN+DTVYEEQI +L K +
Sbjct: 541 PRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAI 600
Query: 200 AALAASKTATLPSSK-------------SKQHKKTVGSQFRESLSLLMRTLNSTIPHYIR 246
+ +A+ + +P S+ SK+HKKTVG QFR SL LLM TLN+T PHY+R
Sbjct: 601 SPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVR 660
Query: 247 CIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIR 306
CIKPND F+F F F+ R +QQLRACGVLETIR
Sbjct: 661 CIKPND----FKF------------------------PFTFDEKRAVQQLRACGVLETIR 692
Query: 307 ISAAGFPSRWTYGEFYNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTK 366
ISAAGFPSRWTY EF++RYRVL +KQ + + + ++++ I D DKY+FGKTK
Sbjct: 693 ISAAGFPSRWTYQEFFSRYRVL---MKQKDV-LSDRKQTCKNVLEKLILDKDKYQFGKTK 748
Query: 367 IFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSILKSVATLQRWTRGYLARR 426
IFFR+GQVAYLEK+RA+KL+ CI IQK +R G+L R+
Sbjct: 749 IFFRAGQVAYLEKIRADKLRAACIRIQKTIR-----------------------GWLMRK 785
Query: 427 LVLHMRRTRA 436
+ MRR A
Sbjct: 786 KYMRMRRGDA 795
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/368 (55%), Positives = 248/368 (67%), Gaps = 47/368 (12%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYD 90
FIGVLDIYGFETF+ N+FEQFCINYANEKLQQQFN HVFKLEQEEY++E I W IDFYD
Sbjct: 432 FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYD 491
Query: 91 NQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLV 150
NQPCI+LIE+K+G+LDLLDEECKMPKGSD +WA+KLY +K + F KPR +F++
Sbjct: 492 NQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCAL-FEKPRLSNKAFII 550
Query: 151 KHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXG-AKRMAALAASKTAT 209
KHFAD V Y GFLEKN+DTVYEEQI +L K ++ +A+ +
Sbjct: 551 KHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGR 610
Query: 210 LPSSK-------------SKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRA 256
+P S+ SK+HKKTVG QFR SL LLM TLN+T PHY+RCIKPND K
Sbjct: 611 VPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFP 670
Query: 257 FEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRW 316
F F+ R +QQLRACGVLETIR ISAAGFPSRW
Sbjct: 671 FTFDEKRAVQQLRACGVLETIR----------------------------ISAAGFPSRW 702
Query: 317 TYGEFYNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAY 376
TY EF++RYRVL +KQ + + + ++++ I D DKY+FGKTKIFFR+GQVAY
Sbjct: 703 TYQEFFSRYRVL---MKQKDV-LSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAY 758
Query: 377 LEKLRAEK 384
LEK+RA+K
Sbjct: 759 LEKIRADK 766
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 211/406 (51%), Gaps = 48/406 (11%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
+IGVLDI GFE FD N+FEQ CINY NE+LQQ FN H+F LEQEEY +EGI W+FIDF
Sbjct: 455 YIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGM 514
Query: 90 DNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKP------RF 143
D Q CIDLIE +GIL +L+EEC PK D S+ +KLY K ++ F KP
Sbjct: 515 DLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGK-NRMFTKPGKPTRPNQ 573
Query: 144 GAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALA 203
G F + H+A +V Y G+LEKN+D + E +ALL A+ A
Sbjct: 574 GPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLV-------AELFKAPE 626
Query: 204 ASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
+T+ + RESL+ LM+ L ST PH++RCI PN
Sbjct: 627 EPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPN------------ 674
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+L+ G+++ A + QL+ GVLE IRI GFPSR Y EF
Sbjct: 675 ---ELKQPGLVD-------------AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQ 718
Query: 324 RYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAE 383
RY +L N + E I+ D +Y+ G TK+FF++G + LE++R E
Sbjct: 719 RYSILAPN--AIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDE 776
Query: 384 KLKRCCIVIQKNVRCFLVRKKYLSILK---SVATLQRWTRGYLARR 426
+L + + Q ++R +L+RK Y + ++ +QR R +L R
Sbjct: 777 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 822
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 211/406 (51%), Gaps = 48/406 (11%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
+IGVLDI GFE FD N+FEQ CINY NE+LQQ FN H+F LEQEEY +EGI W+FIDF
Sbjct: 455 YIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGM 514
Query: 90 DNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKP------RF 143
D Q CIDLIE +GIL +L+EEC PK D S+ +KLY K ++ F KP
Sbjct: 515 DLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGK-NRMFTKPGKPTRPNQ 573
Query: 144 GAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALA 203
G F + H+A +V Y G+LEKN+D + E +ALL A+ A
Sbjct: 574 GPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLV-------AELFKAPE 626
Query: 204 ASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
+T+ + RESL+ LM+ L ST PH++RCI PN
Sbjct: 627 EPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPN------------ 674
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+L+ G+++ A + QL+ GVLE IRI GFPSR Y EF
Sbjct: 675 ---ELKQPGLVD-------------AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQ 718
Query: 324 RYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAE 383
RY +L N + E I+ D +Y+ G TK+FF++G + LE++R E
Sbjct: 719 RYSILAPN--AIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDE 776
Query: 384 KLKRCCIVIQKNVRCFLVRKKYLSILK---SVATLQRWTRGYLARR 426
+L + + Q ++R +L+RK Y + ++ +QR R +L R
Sbjct: 777 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 822
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 211/406 (51%), Gaps = 48/406 (11%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
+IGVLDI GFE FD N+FEQ CINY NE+LQQ FN H+F LEQEEY +EGI W+FIDF
Sbjct: 455 YIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGM 514
Query: 90 DNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKP------RF 143
D Q CIDLIE +GIL +L+EEC PK D S+ +KLY K ++ F KP
Sbjct: 515 DLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGK-NRMFTKPGKPTRPNQ 573
Query: 144 GAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALA 203
G F + H+A +V Y G+LEKN+D + E +ALL A+ A
Sbjct: 574 GPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLV-------AELFKAPE 626
Query: 204 ASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
+T+ + RESL+ LM+ L ST PH++RCI PN
Sbjct: 627 EPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPN------------ 674
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+L+ G+++ A + QL+ GVLE IRI GFPSR Y EF
Sbjct: 675 ---ELKQPGLVD-------------AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQ 718
Query: 324 RYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAE 383
RY +L N + E I+ D +Y+ G TK+FF++G + LE++R E
Sbjct: 719 RYSILAPN--AIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDE 776
Query: 384 KLKRCCIVIQKNVRCFLVRKKYLSILK---SVATLQRWTRGYLARR 426
+L + + Q ++R +L+RK Y + ++ +QR R +L R
Sbjct: 777 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 822
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 211/406 (51%), Gaps = 48/406 (11%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
+IGVLDI GFE FD N+FEQ CINY NE+LQQ FN H+F LEQEEY +EGI W+FIDF
Sbjct: 451 YIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGM 510
Query: 90 DNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKP------RF 143
D Q CIDLIE +GIL +L+EEC PK D S+ +KLY K ++ F KP
Sbjct: 511 DLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGK-NRMFTKPGKPTRPNQ 569
Query: 144 GAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALA 203
G F + H+A +V Y G+LEKN+D + E +ALL A+ A
Sbjct: 570 GPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLV-------AELFKAPE 622
Query: 204 ASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
+T+ + RESL+ LM+ L ST PH++RCI PN
Sbjct: 623 EPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPN------------ 670
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+L+ G+++ A + QL+ GVLE IRI GFPSR Y EF
Sbjct: 671 ---ELKQPGLVD-------------AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQ 714
Query: 324 RYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAE 383
RY +L N + E I+ D +Y+ G TK+FF++G + LE++R E
Sbjct: 715 RYSILAPN--AIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDE 772
Query: 384 KLKRCCIVIQKNVRCFLVRKKYLSILK---SVATLQRWTRGYLARR 426
+L + + Q ++R +L+RK Y + ++ +QR R +L R
Sbjct: 773 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 818
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 211/406 (51%), Gaps = 48/406 (11%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
+IGVLDI GFE FD N+FEQ CINY NE+LQQ FN H+F LEQEEY +EGI W+FIDF
Sbjct: 450 YIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGM 509
Query: 90 DNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKP------RF 143
D Q CIDLIE +GIL +L+EEC PK D S+ +KLY K ++ F KP
Sbjct: 510 DLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGK-NRMFTKPGKPTRPNQ 568
Query: 144 GAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALA 203
G F + H+A +V Y G+LEKN+D + E +ALL A+ A
Sbjct: 569 GPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLV-------AELFKAPE 621
Query: 204 ASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
+T+ + RESL+ LM+ L ST PH++RCI PN
Sbjct: 622 EPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPN------------ 669
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+L+ G+++ A + QL+ GVLE IRI GFPSR Y EF
Sbjct: 670 ---ELKQPGLVD-------------AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQ 713
Query: 324 RYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAE 383
RY +L N + E I+ D +Y+ G TK+FF++G + LE++R E
Sbjct: 714 RYSILAPN--AIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDE 771
Query: 384 KLKRCCIVIQKNVRCFLVRKKYLSILK---SVATLQRWTRGYLARR 426
+L + + Q ++R +L+RK Y + ++ +QR R +L R
Sbjct: 772 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 817
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 217/412 (52%), Gaps = 56/412 (13%)
Query: 27 PPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFI 86
P FIGVLDI GFE FD N+FEQ CIN+ NEKLQQ FN H+F LEQEEY +EGIEW+FI
Sbjct: 451 PRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFI 510
Query: 87 DF-YDNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGA 145
DF D CI+LIE +GI +L+EEC PK +DTS+ KLY + K S +F KP+
Sbjct: 511 DFGMDLAACIELIEKPMGIFSILEEECMFPKATDTSFKNKLYDQHLGK-SNNFQKPKPAK 569
Query: 146 GS----FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAA 201
G F + H+A V Y+ +G+LEKN+D + E I L K +A
Sbjct: 570 GKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKS-----------SVKTLAL 618
Query: 202 LAASKTATLPSSKSKQHK-------KTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTK 254
L A+ K+ +TV + FRE+L+ LM L ST PH++RCI PN+TK
Sbjct: 619 LFATYGGEAEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETK 678
Query: 255 RAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPS 314
G +E + QLR GVLE IRI GFPS
Sbjct: 679 TP---------------GAME-------------HELVLHQLRCNGVLEGIRICRKGFPS 710
Query: 315 RWTYGEFYNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQV 374
R Y +F RYRVL + + S + E ++ S D +Y+FG TK+FF++G +
Sbjct: 711 RVLYADFKQRYRVLNASAIPEGQFMDS-KKASEKLLGSIDVDHTQYRFGHTKVFFKAGLL 769
Query: 375 AYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSIL---KSVATLQRWTRGYL 423
LE++R +KL Q R FL+R +Y ++ +S+ +Q R ++
Sbjct: 770 GLLEEMRDDKLAEIITRTQARCRGFLMRVEYRRMVERRESIFCIQYNVRSFM 821
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 157/409 (38%), Positives = 217/409 (53%), Gaps = 55/409 (13%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE FD N+FEQ CINY NE+LQQ FN H+F LEQEEY +EGI W+FIDF
Sbjct: 458 FIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIVWEFIDFGL 517
Query: 90 DNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRF-----G 144
D Q CI+LIE +GIL +L+EEC PK SDTS+ KLY K + F KP+
Sbjct: 518 DLQACIELIEKPMGILSILEEECMFPKASDTSFKNKLYDNHLGK-NPMFGKPKPPKAGCA 576
Query: 145 AGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAA 204
F + H+A V+Y AG+L+KN+D + E + LL R+ L
Sbjct: 577 EAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVELLQNSKEPIVKMLFT--PPRI--LTP 632
Query: 205 SKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHRT 264
S + Q T+ S +ESL+ LM+ L ST PH++RCI PN
Sbjct: 633 GGKKKKGKSAAFQ---TISSVHKESLNKLMKNLYSTHPHFVRCIIPN------------- 676
Query: 265 MQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNR 324
+L+ G+++ A + QLR GVLE IRI GFP+R Y EF R
Sbjct: 677 --ELKTPGLID-------------AALVLHQLRCNGVLEGIRICRKGFPNRIIYSEFKQR 721
Query: 325 YRVLCGNLKQYNTAVHSMNEIGEHIVTSSIA----DCDKYKFGKTKIFFRSGQVAYLEKL 380
Y +L N AV S G+ + +++ D ++Y+ G TK+FF++G + LE +
Sbjct: 722 YSILAPN------AVPSGFADGKVVTDKALSALQLDPNEYRLGNTKVFFKAGVLGMLEDM 775
Query: 381 RAEKLKRCCIVIQKNVRCFLVRKKYLSILK---SVATLQRWTRGYLARR 426
R E+L + + Q ++R +L+RK Y + + +QR R +L R
Sbjct: 776 RDERLSKIISMFQAHIRGYLMRKAYKKLQDQRIGLTLIQRNVRKWLVLR 824
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 152/406 (37%), Positives = 213/406 (52%), Gaps = 47/406 (11%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
+IGVLDI GFE FD N+FEQ CINY NE+LQQ FN H+F LEQEEY +EGI+W+FIDF
Sbjct: 457 YIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEFIDFGM 516
Query: 90 DNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKP------RF 143
D Q CIDLIE +GIL +L+EEC PK D S+ + Y K ++ F KP
Sbjct: 517 DLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDYSYQNHIGK-NRMFTKPGKPTRPNQ 575
Query: 144 GAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALA 203
G F + H+A +V Y AG+L+KN+D + E ++LL A
Sbjct: 576 GHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAELFR------APDE 629
Query: 204 ASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
+ A K +T+ + RESL+ LM+ L ST PH++RCI PN
Sbjct: 630 PAGGAGGKKKKKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPN------------ 677
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+L+ G+++ A + QL+ GVLE IRI GFPSR Y EF
Sbjct: 678 ---ELKQPGLVD-------------AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQ 721
Query: 324 RYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAE 383
RY +L N + E I+T D +Y+ G TK+FF++G + LE++R E
Sbjct: 722 RYSILAPN--AIPQGFVDGKTVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDE 779
Query: 384 KLKRCCIVIQKNVRCFLVRKKYLSILK---SVATLQRWTRGYLARR 426
+L + + Q ++R +L+RK Y + ++ +QR R +L R
Sbjct: 780 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 825
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 203/373 (54%), Gaps = 40/373 (10%)
Query: 21 AAFQTTPPSR-FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQE 79
A +T P + FIGVLDI GFE FD N+FEQ CIN+ NEKLQQ FN H+F LEQEEY +E
Sbjct: 445 ATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKE 504
Query: 80 GIEWKFIDF-YDNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHF 138
GIEW FIDF D Q CIDLIE +GI+ +L+EEC PK +D ++ KL+ K S +F
Sbjct: 505 GIEWTFIDFGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLFDNHLGK-SANF 563
Query: 139 VKPRFGAGS----FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXX 194
KPR G F + H+A V Y+ G+L+KN+D + E + L
Sbjct: 564 QKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFAN 623
Query: 195 GAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTK 254
A A + K S + TV + RE+L+ LM L ST PH++RCI PN+TK
Sbjct: 624 YAGADAPIEKGKGKAKKGSSFQ----TVSALHRENLNKLMTNLRSTHPHFVRCIIPNETK 679
Query: 255 RAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPS 314
+ GV++ + M QLR GVLE IRI GFP+
Sbjct: 680 ---------------SPGVMDNPLV-------------MHQLRCNGVLEGIRICRKGFPN 711
Query: 315 RWTYGEFYNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQV 374
R YG+F RYR+L + S + E +++S D ++YKFG TK+FF++G +
Sbjct: 712 RILYGDFRQRYRILNPAAIPEGQFIDS-RKGAEKLLSSLDIDHNQYKFGHTKVFFKAGLL 770
Query: 375 AYLEKLRAEKLKR 387
LE++R E+L R
Sbjct: 771 GLLEEMRDERLSR 783
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/416 (37%), Positives = 220/416 (52%), Gaps = 55/416 (13%)
Query: 29 SRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF 88
+ F+G+LDI GFE F+ N+FEQ CINY NEKLQQ FN +F LEQEEY +EGIEW FIDF
Sbjct: 457 ASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDF 516
Query: 89 -YDNQPCIDLIE---SKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG 144
D QPCI+LIE + G+L LLDEEC PK +DTS+ EKL + + K
Sbjct: 517 GLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKD 576
Query: 145 AGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXX-----XXXXXGAKRM 199
F + H+A VTY+ + +L KN D + + +LL+ G +M
Sbjct: 577 KTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQM 636
Query: 200 AALAASKTATLPS-SKSKQHK-KTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAF 257
A + S +LPS SK+K+ +TVG ++E L+ LM TL +T P+++RCI PN KRA
Sbjct: 637 AKMTES---SLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 258 EFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWT 317
+ +AH ++QLR GVLE IRI C GFP+R
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRI-------------------C---------RQGFPNRIV 725
Query: 318 YGEFYNRYRVLCGNLKQYNTAVHSMNEIGEH----IVTSSIADCDKYKFGKTKIFFRSGQ 373
+ EF RY +L N A+ G+ ++ + D + Y+ G++KIFFR+G
Sbjct: 726 FQEFRQRYEILAAN------AIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGV 779
Query: 374 VAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYL---SILKSVATLQRWTRGYLARR 426
+A+LE+ R K+ I Q R +L RK + L ++ +QR YL R
Sbjct: 780 LAHLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYLKLR 835
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/416 (37%), Positives = 220/416 (52%), Gaps = 55/416 (13%)
Query: 29 SRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF 88
+ F+G+LDI GFE F+ N+FEQ CINY NEKLQQ FN +F LEQEEY +EGIEW FIDF
Sbjct: 457 ASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDF 516
Query: 89 -YDNQPCIDLIE---SKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG 144
D QPCI+LIE + G+L LLDEEC PK +DTS+ EKL + + K
Sbjct: 517 GLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKD 576
Query: 145 AGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXX-----XXXXXGAKRM 199
F + H+A VTY+ + +L KN D + + +LL+ G +M
Sbjct: 577 KTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQM 636
Query: 200 AALAASKTATLPS-SKSKQHK-KTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAF 257
A + S +LPS SK+K+ +TVG ++E L+ LM TL +T P+++RCI PN KRA
Sbjct: 637 AKMTES---SLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 258 EFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWT 317
+ +AH ++QLR GVLE IRI C GFP+R
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRI-------------------C---------RQGFPNRIV 725
Query: 318 YGEFYNRYRVLCGNLKQYNTAVHSMNEIGEH----IVTSSIADCDKYKFGKTKIFFRSGQ 373
+ EF RY +L N A+ G+ ++ + D + Y+ G++KIFFR+G
Sbjct: 726 FQEFRQRYEILAAN------AIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGV 779
Query: 374 VAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYL---SILKSVATLQRWTRGYLARR 426
+A+LE+ R K+ I Q R +L RK + L ++ +QR YL R
Sbjct: 780 LAHLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYLKLR 835
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 158/416 (37%), Positives = 220/416 (52%), Gaps = 55/416 (13%)
Query: 29 SRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF 88
+ F+G+LDI GFE F+ N+FEQ CINY NEKLQQ FN +F LEQEEY +EGIEW FIDF
Sbjct: 457 ASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDF 516
Query: 89 -YDNQPCIDLIE---SKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG 144
D QPCI+LIE + G+L LLDEEC PK +DTS+ EKL + + K
Sbjct: 517 GLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKD 576
Query: 145 AGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXX-----XXXXXGAKRM 199
F + H+A VTY+ + +L KN D + + +LL+ G +M
Sbjct: 577 KTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQM 636
Query: 200 AALAASKTATLPS-SKSKQHK-KTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAF 257
A + S +LPS SK+K+ +TVG ++E L+ LM TL +T P+++RCI PN KRA
Sbjct: 637 AKMTES---SLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 258 EFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWT 317
+ +AH ++QLR GVLE IRI C GFP+R
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRI-------------------C---------RQGFPNRIV 725
Query: 318 YGEFYNRYRVLCGNLKQYNTAVHSMNEIGEH----IVTSSIADCDKYKFGKTKIFFRSGQ 373
+ EF RY +L N A+ G+ ++ + D + Y+ G++KIFFR+G
Sbjct: 726 FQEFRQRYEILAAN------AIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGV 779
Query: 374 VAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYL---SILKSVATLQRWTRGYLARR 426
+A+LE+ R K+ I Q R +L RK + L ++ +QR YL R
Sbjct: 780 LAHLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYLKLR 835
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 156/413 (37%), Positives = 220/413 (53%), Gaps = 55/413 (13%)
Query: 29 SRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF 88
+ F+G+LDI GFE F+ N+FEQ CINY NEKLQQ FN +F LEQEEY +EGIEW FIDF
Sbjct: 457 ASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDF 516
Query: 89 -YDNQPCIDLIE---SKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG 144
D QPCI+LIE + G+L LLDEEC PK +DTS+ EKL + + K
Sbjct: 517 GLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKD 576
Query: 145 AGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXX-----XXXXGAKRM 199
F + H+A VTY+ + +L KN D + + +LL+ G +M
Sbjct: 577 KTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQM 636
Query: 200 AALAASKTATLPS-SKSKQHK-KTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAF 257
A + S +LPS SK+K+ +TVG ++E L+ LM TL +T P+++RCI PN KRA
Sbjct: 637 AKMTES---SLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 258 EFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWT 317
+ +AH ++QLR GVLE IRI C GFP+R
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRI-------------------C---------RQGFPNRIV 725
Query: 318 YGEFYNRYRVLCGNLKQYNTAVHSMNEIGEH----IVTSSIADCDKYKFGKTKIFFRSGQ 373
+ EF RY +L N A+ G+ ++ + D + Y+ G++KIFFR+G
Sbjct: 726 FQEFRQRYEILAAN------AIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGV 779
Query: 374 VAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYL---SILKSVATLQRWTRGYL 423
+A+LE+ R K+ I Q R +L RK + L+S+ +Q R ++
Sbjct: 780 LAHLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFM 832
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 206/406 (50%), Gaps = 47/406 (11%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
+IGVLDI GFE FD N+FEQ CINY NE+LQQ FN H+F LEQEEY +EGI+W+FIDF
Sbjct: 456 YIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEFIDFGM 515
Query: 90 DNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK------PRF 143
D Q CIDLIE +GIL +L+EEC PK D S+ + Y K ++ F K P
Sbjct: 516 DLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDYSYQNHIGK-NRMFTKPGKPTRPNQ 574
Query: 144 GAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALA 203
G F + H+A +V Y AG+L+KN+D + E ++LL A
Sbjct: 575 GHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAELFR------APDE 628
Query: 204 ASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
+ A K +T+ + RESL+ LM L T PH++RCI PN K +A
Sbjct: 629 PAGGAGGKKKKKSSAFQTISAVHRESLNKLMCNLRRTNPHFVRCIIPNLEKDPGLVDAEL 688
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QL+ GV LE IRI GFPSR Y EF
Sbjct: 689 VLHQLQCNGV----------------------------LEGIRICRKGFPSRLIYSEFKQ 720
Query: 324 RYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAE 383
RY +L N + E I+T D +Y+ G TK+FF++G + LE++R E
Sbjct: 721 RYSILAPN--AIPQGFVDGKTVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDE 778
Query: 384 KLKRCCIVIQKNVRCFLVRKKYLSILK---SVATLQRWTRGYLARR 426
+L + + Q ++R +L+RK Y + ++ +QR R +L R
Sbjct: 779 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 824
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/392 (38%), Positives = 211/392 (53%), Gaps = 52/392 (13%)
Query: 29 SRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF 88
+ F+G+LDI GFE F+ N+FEQ CINY NEKLQQ FN +F LEQEEY +EGIEW FIDF
Sbjct: 457 ASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDF 516
Query: 89 -YDNQPCIDLIE---SKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG 144
D QPCI+LIE + G+L LLDEEC PK +DTS+ EKL + + K
Sbjct: 517 GLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKD 576
Query: 145 AGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXX-----XXXXXGAKRM 199
F + H+A VTY+ + +L KN D + + +LL+ G +M
Sbjct: 577 KTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQM 636
Query: 200 AALAASKTATLPS-SKSKQHK-KTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAF 257
A + S +LPS SK+K+ +TVG ++E L+ LM TL +T P+++RCI PN KRA
Sbjct: 637 AKMTES---SLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 258 EFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWT 317
+ +AH ++QLR GVLE IRI C GFP+R
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRI-------------------C---------RQGFPNRIV 725
Query: 318 YGEFYNRYRVLCGNLKQYNTAVHSMNEIGEH----IVTSSIADCDKYKFGKTKIFFRSGQ 373
+ EF RY +L N A+ G+ ++ + D + Y+ G++KIFFR+G
Sbjct: 726 FQEFRQRYEILAAN------AIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGV 779
Query: 374 VAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKY 405
+A+LE+ R K+ I Q R +L RK +
Sbjct: 780 LAHLEEERDLKITDVIIAFQAQCRGYLARKAF 811
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 203/405 (50%), Gaps = 42/405 (10%)
Query: 27 PPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFI 86
P FIGVLDI GFE FD N+FEQ CIN+ NE LQQ FN H+F LEQEEY EGIEW+FI
Sbjct: 451 PRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFI 510
Query: 87 DF-YDNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGA 145
DF D CI+LIE +GI +L+EEC PK +DTS+ LY + K S +F KP+
Sbjct: 511 DFGMDLAACIELIEXPMGIFSILEEECMFPKATDTSFXNXLYDEHLGK-SNNFQKPKPAK 569
Query: 146 GS----FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAA 201
G F + H+A V Y+ +G+LE N D + E I L
Sbjct: 570 GKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGGEAEG 629
Query: 202 LAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNA 261
K S + TV + FRE+L+ LM L ST PH++RCI PN+T
Sbjct: 630 GGGKKGGKKKGSSFQ----TVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTP----- 680
Query: 262 HRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEF 321
G +E + QLR GVLE IRI GFPSR Y +F
Sbjct: 681 ----------GAME-------------HELVLHQLRCNGVLEGIRICRKGFPSRVLYADF 717
Query: 322 YNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RYRVL + + S + E ++ D +Y FG T +FF +G + LE++R
Sbjct: 718 KQRYRVLNASAIPEGQFMDS-KKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMR 776
Query: 382 AEKLKRCCIVIQKNVRCFLVRKKYLSIL---KSVATLQRWTRGYL 423
+ L Q R FL+R +Y +++ +S+ +Q R ++
Sbjct: 777 DDXLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFM 821
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 203/405 (50%), Gaps = 42/405 (10%)
Query: 27 PPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFI 86
P FIGVLDI GFE FD N+FEQ CIN+ NE LQQ FN H+F LEQEEY EGIEW+FI
Sbjct: 454 PRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFI 513
Query: 87 DF-YDNQPCIDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGA 145
DF D CI+LIE +GI +L+EEC PK +DTS+ LY + K S +F KP+
Sbjct: 514 DFGMDLAACIELIEXPMGIFSILEEECMFPKATDTSFXNXLYDEHLGK-SNNFQKPKPAK 572
Query: 146 GS----FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAA 201
G F + H+A V Y+ +G+LE N D + E I L
Sbjct: 573 GKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGGEAEG 632
Query: 202 LAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNA 261
K S + TV + FRE+L+ LM L ST PH++RCI PN+T
Sbjct: 633 GGGKKGGKKKGSSFQ----TVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTP----- 683
Query: 262 HRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEF 321
G +E + QLR GVLE IRI GFPSR Y +F
Sbjct: 684 ----------GAME-------------HELVLHQLRCNGVLEGIRICRKGFPSRVLYADF 720
Query: 322 YNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RYRVL + + S + E ++ D +Y FG T +FF +G + LE++R
Sbjct: 721 KQRYRVLNASAIPEGQFMDS-KKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMR 779
Query: 382 AEKLKRCCIVIQKNVRCFLVRKKYLSIL---KSVATLQRWTRGYL 423
+ L Q R FL+R +Y +++ +S+ +Q R ++
Sbjct: 780 DDXLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFM 824
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 203/372 (54%), Gaps = 52/372 (13%)
Query: 29 SRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF 88
+ F+G+LDI GFE F+ N+FEQ CINY NEKLQQ FN +F LEQEEY +EGIEW FIDF
Sbjct: 457 ASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDF 516
Query: 89 -YDNQPCIDLIE---SKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG 144
D QPCI+LIE + G+L LLDEEC PK +DTS+ EKL + + K
Sbjct: 517 GLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKD 576
Query: 145 AGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXX-----XXXXXGAKRM 199
F + H+A VTY+ + +L KN D + + +LL+ G +M
Sbjct: 577 KTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQM 636
Query: 200 AALAASKTATLPS-SKSKQHK-KTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAF 257
A + S +LPS SK+K+ +TVG ++E L+ LM TL +T P+++RCI PN KRA
Sbjct: 637 AKMTES---SLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 258 EFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWT 317
+ +AH ++QLR GVLE IRI C GFP+R
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRI-------------------C---------RQGFPNRIV 725
Query: 318 YGEFYNRYRVLCGNLKQYNTAVHSMNEIGEH----IVTSSIADCDKYKFGKTKIFFRSGQ 373
+ EF RY +L N A+ G+ ++ + D + Y+ G++KIFFR+G
Sbjct: 726 FQEFRQRYEILAAN------AIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGV 779
Query: 374 VAYLEKLRAEKL 385
+A+LE+ R K+
Sbjct: 780 LAHLEEERDLKI 791
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 194/359 (54%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDIYGFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 449 FIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 197/364 (54%), Gaps = 57/364 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 460 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 519
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 520 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 578
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 579 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 622
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 623 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 682
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 683 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 714
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRA 382
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 715 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEARE 770
Query: 383 EKLK 386
++L+
Sbjct: 771 QRLE 774
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 197/364 (54%), Gaps = 57/364 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 448 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 507
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 508 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 566
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 567 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 610
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 611 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 670
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 671 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 702
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRA 382
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 703 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEARE 758
Query: 383 EKLK 386
++L+
Sbjct: 759 QRLE 762
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 197/364 (54%), Gaps = 57/364 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 460 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 519
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 520 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 578
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 579 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 622
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 623 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 682
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 683 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 714
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRA 382
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 715 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEARE 770
Query: 383 EKLK 386
++L+
Sbjct: 771 QRLE 774
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 197/364 (54%), Gaps = 57/364 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 448 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 507
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 508 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 566
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 567 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 610
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 611 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 670
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 671 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 702
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRA 382
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 703 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEARE 758
Query: 383 EKLK 386
++L+
Sbjct: 759 QRLE 762
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 194/359 (54%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDIYGFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 449 FIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++++FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 196/363 (53%), Gaps = 57/363 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 460 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 519
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 520 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 578
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 579 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 622
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 623 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 682
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 683 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 714
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRA 382
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 715 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEARE 770
Query: 383 EKL 385
+++
Sbjct: 771 QRI 773
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 196/363 (53%), Gaps = 57/363 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 460 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 519
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 520 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 578
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 579 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 622
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 623 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 682
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 683 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 714
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRA 382
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 715 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEARE 770
Query: 383 EKL 385
+++
Sbjct: 771 QRI 773
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 196/363 (53%), Gaps = 57/363 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FK+EQEEYL+E I W FIDF
Sbjct: 449 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRA 382
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEARE 759
Query: 383 EKL 385
++L
Sbjct: 760 QRL 762
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 193/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 449 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 193/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 449 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 194/359 (54%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 448 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 507
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 508 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 566
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 567 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 610
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 611 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 670
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR C V VLE IRI+ GFP+R Y +F
Sbjct: 671 VLDQLR-CNV---------------------------VLEGIRITRKGFPNRIIYADFVK 702
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 703 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEAR 757
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 193/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 449 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 193/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 449 FIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 193/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FK+EQEEYL+E I W FIDF
Sbjct: 449 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 193/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FK+EQEEYL+E I W FIDF
Sbjct: 449 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 193/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 449 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++++FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 193/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 449 FIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++++FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 192/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 448 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 507
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 508 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 566
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 567 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 610
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 611 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 670
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR VL E IRI+ GFP+R Y +F
Sbjct: 671 VLDQLRCNAVL----------------------------EGIRITRKGFPNRIIYADFVK 702
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY +L N+ + + + + + +H+ D ++Y+FG TKIFFR+GQ+A +E+ R
Sbjct: 703 RYYLLAPNVPRDAEDSQKATDAVLKHLNI----DPEQYRFGITKIFFRAGQLARIEEAR 757
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 192/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FK+EQEEYL+E I W FIDF
Sbjct: 449 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EAIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY L N+ + + + + + +H+ D ++++FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYDLAPNVPRDAEDSQKATDAVLKHLNI----DPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 192/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FK+EQEEYL+E I W FIDF
Sbjct: 449 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY L N+ + + + + + +H+ D ++++FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYDLAPNVPRDAEDSQKATDAVLKHLNI----DPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 192/379 (50%), Gaps = 46/379 (12%)
Query: 29 SRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF 88
+ F+G+LDI GFE F N+FEQ CINY NEKLQQ FN +F LEQEEY +EGI W F+DF
Sbjct: 426 ASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDF 485
Query: 89 -YDNQPCIDLIE---SKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRF- 143
D QPCIDLIE + G+L LLDEEC PK +D S+ EK+ + F +PR
Sbjct: 486 GLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQGGH--PKFQRPRHL 543
Query: 144 -GAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXX--XXXXGAKRMA 200
F V H+A V Y +L KN D + + ALLH G +
Sbjct: 544 RDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLE 603
Query: 201 ALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFN 260
+++ + +TVG ++ESLS LM TL++T P ++RCI PN KRA
Sbjct: 604 QVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSFVRCIVPNHEKRA---- 659
Query: 261 AHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGE 320
G LE + + QLR GVLE IRI GFP+R + E
Sbjct: 660 -----------GKLEPRLV-------------LDQLRCNGVLEGIRICRQGFPNRILFQE 695
Query: 321 FYNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKL 380
F RY +L N + E ++ + D + Y+ G++KIFFR+G +A LE+
Sbjct: 696 FRQRYEILTPN--AIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEE 753
Query: 381 RAEK------LKRCCIVIQ 393
RA + LKR ++Q
Sbjct: 754 RASEQTKSDYLKRANELVQ 772
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 192/359 (53%), Gaps = 57/359 (15%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FK+EQE+YL+E I W FIDF
Sbjct: 449 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKINWTFIDFGL 508
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 567
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 611
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 612 FNDPNIASRAKKGANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 671
Query: 264 TMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323
+ QLR GVL E IRI+ GFP+R Y +F
Sbjct: 672 VLDQLRCNGVL----------------------------EGIRITRKGFPNRIIYADFVK 703
Query: 324 RYRVLCGNL-KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381
RY L N+ + + + + + +H+ D ++++FG TKIFFR+GQ+A +E+ R
Sbjct: 704 RYYDLAPNVPRDAEDSQKATDAVLKHLNI----DPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 184/352 (52%), Gaps = 50/352 (14%)
Query: 25 TTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWK 84
TT IG+LDIYGFE F +N+FEQ IN+ NEKLQQ F + K EQEEY++EGIEWK
Sbjct: 375 TTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWK 434
Query: 85 FIDFYDNQPCIDLIESK-LGILDLLDEECKMPKGSDTSWAE---KLYTKCSDKWSKHFVK 140
I++++N+P +LIE K +G++ LLDE C + K +D ++ + K + K S K
Sbjct: 435 NIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSYVVSK 494
Query: 141 PR-FGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRM 199
R G F +KH+A DVTYD GFL+KN+DT++ + I+ +
Sbjct: 495 DRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSD-------------- 540
Query: 200 AALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEF 259
L SK+ +T GSQFR +++ L+ TL + PHY+RCIK ND K+A
Sbjct: 541 -PLVQGLFPPTRPEDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVI 599
Query: 260 NAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYG 319
+ R Q+R G+L E +R+ AGF R Y
Sbjct: 600 DEDRVRHQVRYLGLL----------------------------ENVRVRRAGFAGRIEYT 631
Query: 320 EFYNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRS 371
FYNRY++LC K + + + + E I+ D ++ + GKTK+F R+
Sbjct: 632 RFYNRYKMLCK--KTWPSFNGTAKQATELILQQHNIDKEEIRMGKTKVFIRN 681
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 184/352 (52%), Gaps = 50/352 (14%)
Query: 25 TTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWK 84
TT IG+LDIYGFE F +N+FEQ IN+ NEKLQQ F + K EQEEY++EGIEWK
Sbjct: 375 TTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWK 434
Query: 85 FIDFYDNQPCIDLIESK-LGILDLLDEECKMPKGSDTSWAE---KLYTKCSDKWSKHFVK 140
I++++N+P +LIE K +G++ LLDE C + K +D ++ + K + K S K
Sbjct: 435 NIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSYVVSK 494
Query: 141 PR-FGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRM 199
R G F +KH+A DVTYD GFL+KN+DT++ + I+ +
Sbjct: 495 DRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSD-------------- 540
Query: 200 AALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEF 259
L SK+ +T GSQFR +++ L+ TL + PHY+RCIK ND K+A
Sbjct: 541 -PLVQGLFPPTRPEDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVI 599
Query: 260 NAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYG 319
+ R Q+R G+L E +R+ AGF R Y
Sbjct: 600 DEDRVRHQVRYLGLL----------------------------ENVRVRRAGFAGRIEYT 631
Query: 320 EFYNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRS 371
FYNRY++LC K + + + + E I+ D ++ + GKTK+F R+
Sbjct: 632 RFYNRYKMLCK--KTWPSFNGTAKQATELILQQHNIDKEEIRMGKTKVFIRN 681
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/260 (43%), Positives = 151/260 (58%), Gaps = 24/260 (9%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDIYGFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 448 FIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 507
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 508 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 566
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 567 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 610
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 611 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 670
Query: 264 TMQQLRACGVLETIRISAAG 283
+ QLR GVLE IRI+ G
Sbjct: 671 VLDQLRCNGVLEGIRITRKG 690
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 150/260 (57%), Gaps = 24/260 (9%)
Query: 31 FIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-Y 89
FIGVLDI GFE F N+FEQ CINY NEKLQQ FN H+FKLEQEEYL+E I W FIDF
Sbjct: 448 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 507
Query: 90 DNQPCIDLIESK--LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGS 147
D+Q IDLI+ + GIL LLDE+ P +D + KL++ S K +K + +PRF
Sbjct: 508 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAK-YEEPRFSKTE 566
Query: 148 FLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXXXXGAKRMAALAASKT 207
F V H+A V Y+ +LEKN+D + ++ + L K + +K
Sbjct: 567 FGVTHYAGQVMYEIQDWLEKNKDPL-QQDLELCF---------------KDSSDNVVTKL 610
Query: 208 ATLPSSKSKQHKK----TVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHR 263
P+ S+ K TV +Q++E L+ LM TL +T PH++RCI PN+ + +
Sbjct: 611 FNDPNIASRAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKV 670
Query: 264 TMQQLRACGVLETIRISAAG 283
+ QLR GVLE IRI+ G
Sbjct: 671 VLDQLRCNGVLEGIRITRKG 690
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 145/471 (30%), Positives = 219/471 (46%), Gaps = 105/471 (22%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 444 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 501
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D + +
Sbjct: 502 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 561
Query: 141 P---------RFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXX 191
R G F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 562 KSKLAIHRNIRDDEG-FIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------ 614
Query: 192 XXXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCI 248
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCI
Sbjct: 615 -----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCI 669
Query: 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRIS 308
KPN + +H F + + QL+ G++ + +
Sbjct: 670 KPN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLM 701
Query: 309 AAGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIA 355
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 702 QGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI---------- 747
Query: 356 DCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSILKSVATL 415
YKFG TK+FFR G+ A +++ ++ K V +L+
Sbjct: 748 ---DYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELV-KRVNHWLI-------------C 790
Query: 416 QRWTRGYLARRLVLHMR-----RTRAAVRIQSAVRAFI-RRRQYLRLRALV 460
RW + V+ ++ R A +++Q +R ++ +RR R+ LV
Sbjct: 791 SRWKKVQWCSLSVIKLKNKIKYRAEACIKMQKTIRMWLCKRRHKPRIDGLV 841
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 188/384 (48%), Gaps = 83/384 (21%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 453 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 510
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKW------ 134
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D +
Sbjct: 511 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 570
Query: 135 -SKHFVKPRF-GAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXXX 192
SK + F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 571 KSKLAIHENIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------- 623
Query: 193 XXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCIK 249
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCIK
Sbjct: 624 ----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIK 679
Query: 250 PNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISA 309
PN + +H F + + QL+ G++ + +
Sbjct: 680 PN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLMQ 711
Query: 310 AGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIAD 356
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 712 GGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI----------- 756
Query: 357 CDKYKFGKTKIFFRSGQVAYLEKL 380
YKFG TK+FFR G+ A +++
Sbjct: 757 --DYKFGLTKVFFRPGKFAEFDQI 778
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 188/385 (48%), Gaps = 85/385 (22%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 453 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 510
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D + +
Sbjct: 511 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 570
Query: 141 P---------RFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXX 191
R G F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 571 KSKLAIHRNIRDDEG-FIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------ 623
Query: 192 XXXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCI 248
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCI
Sbjct: 624 -----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCI 678
Query: 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRIS 308
KPN + +H F + + QL+ G++ + +
Sbjct: 679 KPN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLM 710
Query: 309 AAGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIA 355
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 711 QGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI---------- 756
Query: 356 DCDKYKFGKTKIFFRSGQVAYLEKL 380
YKFG TK+FFR G+ A +++
Sbjct: 757 ---DYKFGLTKVFFRPGKFAEFDQI 778
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 188/385 (48%), Gaps = 85/385 (22%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 417 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 474
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D + +
Sbjct: 475 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 534
Query: 141 P---------RFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXX 191
R G F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 535 KSKLAIHRNIRDDEG-FIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------ 587
Query: 192 XXXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCI 248
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCI
Sbjct: 588 -----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCI 642
Query: 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRIS 308
KPN + +H F + + QL+ G++ + +
Sbjct: 643 KPN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLM 674
Query: 309 AAGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIA 355
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 675 QGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI---------- 720
Query: 356 DCDKYKFGKTKIFFRSGQVAYLEKL 380
YKFG TK+FFR G+ A +++
Sbjct: 721 ---DYKFGLTKVFFRPGKFAEFDQI 742
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 188/385 (48%), Gaps = 85/385 (22%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 441 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 498
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D + +
Sbjct: 499 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 558
Query: 141 P---------RFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXX 191
R G F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 559 KSKLAIHRNIRDDEG-FIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------ 611
Query: 192 XXXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCI 248
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCI
Sbjct: 612 -----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCI 666
Query: 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRIS 308
KPN + +H F + + QL+ G++ + +
Sbjct: 667 KPN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLM 698
Query: 309 AAGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIA 355
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 699 QGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI---------- 744
Query: 356 DCDKYKFGKTKIFFRSGQVAYLEKL 380
YKFG TK+FFR G+ A +++
Sbjct: 745 ---DYKFGLTKVFFRPGKFAEFDQI 766
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 188/385 (48%), Gaps = 85/385 (22%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 443 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 500
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D + +
Sbjct: 501 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 560
Query: 141 P---------RFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXX 191
R G F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 561 KSKLAIHRNIRDDEG-FIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------ 613
Query: 192 XXXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCI 248
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCI
Sbjct: 614 -----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCI 668
Query: 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRIS 308
KPN + +H F + + QL+ G++ + +
Sbjct: 669 KPN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLM 700
Query: 309 AAGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIA 355
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 701 QGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI---------- 746
Query: 356 DCDKYKFGKTKIFFRSGQVAYLEKL 380
YKFG TK+FFR G+ A +++
Sbjct: 747 ---DYKFGLTKVFFRPGKFAEFDQI 768
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 188/385 (48%), Gaps = 85/385 (22%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 440 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 497
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D + +
Sbjct: 498 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 557
Query: 141 P---------RFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXX 191
R G F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 558 KSKLAIHRNIRDDEG-FIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------ 610
Query: 192 XXXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCI 248
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCI
Sbjct: 611 -----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCI 665
Query: 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRIS 308
KPN + +H F + + QL+ G++ + +
Sbjct: 666 KPN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLM 697
Query: 309 AAGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIA 355
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 698 QGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI---------- 743
Query: 356 DCDKYKFGKTKIFFRSGQVAYLEKL 380
YKFG TK+FFR G+ A +++
Sbjct: 744 ---DYKFGLTKVFFRPGKFAEFDQI 765
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 188/385 (48%), Gaps = 85/385 (22%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 443 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 500
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D + +
Sbjct: 501 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 560
Query: 141 P---------RFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXX 191
R G F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 561 KSKLAIHRNIRDDEG-FIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------ 613
Query: 192 XXXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCI 248
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCI
Sbjct: 614 -----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCI 668
Query: 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRIS 308
KPN + +H F + + QL+ G++ + +
Sbjct: 669 KPN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLM 700
Query: 309 AAGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIA 355
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 701 QGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI---------- 746
Query: 356 DCDKYKFGKTKIFFRSGQVAYLEKL 380
YKFG TK+FFR G+ A +++
Sbjct: 747 ---DYKFGLTKVFFRPGKFAEFDQI 768
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 188/385 (48%), Gaps = 85/385 (22%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 417 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 474
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D + +
Sbjct: 475 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 534
Query: 141 P---------RFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXX 191
R G F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 535 KSKLAIHRNIRDDEG-FIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------ 587
Query: 192 XXXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCI 248
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCI
Sbjct: 588 -----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCI 642
Query: 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRIS 308
KPN + +H F + + QL+ G++ + +
Sbjct: 643 KPN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLM 674
Query: 309 AAGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIA 355
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 675 QGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI---------- 720
Query: 356 DCDKYKFGKTKIFFRSGQVAYLEKL 380
YKFG TK+FFR G+ A +++
Sbjct: 721 ---DYKFGLTKVFFRPGKFAEFDQI 742
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 188/385 (48%), Gaps = 85/385 (22%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 418 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 475
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D + +
Sbjct: 476 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 535
Query: 141 P---------RFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXX 191
R G F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 536 KSKLAIHRNIRDDEG-FIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------ 588
Query: 192 XXXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCI 248
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCI
Sbjct: 589 -----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCI 643
Query: 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRIS 308
KPN + +H F + + QL+ G++ + +
Sbjct: 644 KPN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLM 675
Query: 309 AAGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIA 355
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 676 QGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI---------- 721
Query: 356 DCDKYKFGKTKIFFRSGQVAYLEKL 380
YKFG TK+FFR G+ A +++
Sbjct: 722 ---DYKFGLTKVFFRPGKFAEFDQI 743
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 188/385 (48%), Gaps = 85/385 (22%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 443 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 500
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D + +
Sbjct: 501 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 560
Query: 141 P---------RFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXX 191
R G F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 561 KSKLAIHRNIRDDEG-FIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------ 613
Query: 192 XXXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCI 248
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCI
Sbjct: 614 -----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCI 668
Query: 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRIS 308
KPN + +H F + + QL+ G++ + +
Sbjct: 669 KPN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLM 700
Query: 309 AAGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIA 355
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 701 QGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI---------- 746
Query: 356 DCDKYKFGKTKIFFRSGQVAYLEKL 380
YKFG TK+FFR G+ A +++
Sbjct: 747 ---DYKFGLTKVFFRPGKFAEFDQI 768
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 188/385 (48%), Gaps = 85/385 (22%)
Query: 22 AFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI 81
F+T+ S FIGVLDI GFE F+ N+FEQFCINY NEKLQQ FN+ + K EQE Y +EG+
Sbjct: 444 PFETS--SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGL 501
Query: 82 EWKFIDFYDNQPCIDLIESKL-GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVK 140
+ + DNQ CIDLIE++L GILD+LDEE ++P+ SD + ++ K D + +
Sbjct: 502 GVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPR 561
Query: 141 P---------RFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHXXXXXXXXXX 191
R G F+++HFA V Y+T F+EKN D ++ +L+
Sbjct: 562 KSKLAIHRNIRDDEG-FIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD------ 614
Query: 192 XXXGAKRMAALAASKTATLPSSKSKQHKK---TVGSQFRESLSLLMRTLNSTIPHYIRCI 248
K + L S T +K K K +VG++F+ L+LL+ L ST +IRCI
Sbjct: 615 -----KFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCI 669
Query: 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRIS 308
KPN + +H F + + QL+ G++ + +
Sbjct: 670 KPN-----LKMTSHH-----------------------FEGAQILSQLQCSGMVSVLDLM 701
Query: 309 AAGFPSRWTYGEFYNRY-------------RVLCGNLKQYNTAVHSMNEIGEHIVTSSIA 355
GFPSR ++ E YN Y R+ C L + +NEI
Sbjct: 702 QGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFK----ALGLNEI---------- 747
Query: 356 DCDKYKFGKTKIFFRSGQVAYLEKL 380
YKFG TK+FFR G+ A +++
Sbjct: 748 ---DYKFGLTKVFFRPGKFAEFDQI 769
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 382 AEKLKRCCIVIQKNVRCFLVRKKYLSILKSVATLQRWTRGYLARRLVLHMRRTRAA 437
A+KL+ CI IQK +R +L+RK+YL + ++ T+QR+ RGY AR +RRT+AA
Sbjct: 1 ADKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAA 56
>pdb|3A1J|A Chain A, Crystal Structure Of The Human Rad9-Hus1-Rad1 Complex
Length = 266
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 330 GNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCC 389
GN+K AVHS++ IG+ + + D + + RS +L + +
Sbjct: 8 GNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSS---RSAYACFLFAPLFFQQYQAA 64
Query: 390 IVIQKNVRCFLVRKKYLSILKSVATLQR 417
Q +RC ++ K +LS+ +S+A L++
Sbjct: 65 TPGQDLLRCKILXKSFLSVFRSLAXLEK 92
>pdb|3G65|A Chain A, Crystal Structure Of The Human Rad9-Rad1-Hus1 Dna Damage
Checkpoint Complex
Length = 296
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 330 GNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCC 389
GN+K AVHS++ IG+ + + D + + RS +L + +
Sbjct: 8 GNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSS---RSAYACFLFAPLFFQQYQAA 64
Query: 390 IVIQKNVRCFLVRKKYLSILKSVATLQR 417
Q +RC ++ K +LS+ +S+A L++
Sbjct: 65 TPGQDLLRCKILMKSFLSVFRSLAMLEK 92
>pdb|3GGR|A Chain A, Crystal Structure Of The Human Rad9-Hus1-Rad1 Complex
Length = 270
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 330 GNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCC 389
GN+K AVHS++ IG+ + + D + + RS +L + +
Sbjct: 8 GNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSS---RSAYACFLFAPLFFQQYQAA 64
Query: 390 IVIQKNVRCFLVRKKYLSILKSVATLQR 417
Q +RC ++ K +LS+ +S+A L++
Sbjct: 65 TPGQDLLRCKILMKSFLSVFRSLAMLEK 92
>pdb|3AUZ|A Chain A, Crystal Structure Of Mre11 With Manganese
Length = 333
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 17/86 (19%)
Query: 38 YGFETFDSNNFEQFCINYANEKLQQQFN----------QHVFKLEQEEYLQEGIEWKFID 87
Y E FD F + + + ++++ ++FN + +++ E E+Y +EG + +D
Sbjct: 189 YELEHFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVD 248
Query: 88 FYDNQPCIDLIESKLGILDLLDEECK 113
F N I IE +D EC+
Sbjct: 249 FSGNDLDISDIEK-------IDIECR 267
>pdb|1KCF|A Chain A, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
pdb|1KCF|B Chain B, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
Length = 258
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 27/114 (23%)
Query: 35 LDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGI----EWKFIDFYD 90
LDI E F ++ I N L ++FN HV +E++ Y + GI EW
Sbjct: 81 LDIQWTEDFQPSSMADLSIQLFN-TLHEKFNPHVILMERQRY-RSGIATIPEWTL----- 133
Query: 91 NQPCIDLIESKLGILDLLDEECKM-------------PKGSDTSWAEKLYTKCS 131
++++ES L L ++ + PK + + WA L TK S
Sbjct: 134 ---RVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLNTKAS 184
>pdb|3AV0|A Chain A, Crystal Structure Of Mre11-Rad50 Bound To Atp S
Length = 386
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 17/86 (19%)
Query: 38 YGFETFDSNNFEQFCINYANEKLQQQFN----------QHVFKLEQEEYLQEGIEWKFID 87
Y E FD F + + + ++++ ++FN + +++ E E+Y +EG + +D
Sbjct: 189 YELEHFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVD 248
Query: 88 FYDNQPCIDLIESKLGILDLLDEECK 113
F N I IE +D EC+
Sbjct: 249 FSGNDLDISDIEK-------IDIECR 267
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,382,620
Number of Sequences: 62578
Number of extensions: 498030
Number of successful extensions: 1582
Number of sequences better than 100.0: 68
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1187
Number of HSP's gapped (non-prelim): 183
length of query: 560
length of database: 14,973,337
effective HSP length: 104
effective length of query: 456
effective length of database: 8,465,225
effective search space: 3860142600
effective search space used: 3860142600
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 54 (25.4 bits)