Query psy10328
Match_columns 560
No_of_seqs 290 out of 2333
Neff 8.3
Searched_HMMs 46136
Date Fri Aug 16 15:11:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10328.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10328hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG5022 Myosin heavy chain [Cy 100.0 3E-100 7E-105 847.8 43.7 495 16-555 415-915 (1463)
2 PTZ00014 myosin-A; Provisional 100.0 3E-90 6.6E-95 769.8 31.8 363 17-426 450-817 (821)
3 KOG0164|consensus 100.0 2.3E-82 5E-87 656.0 33.4 393 29-476 374-786 (1001)
4 cd01380 MYSc_type_V Myosin mot 100.0 4.7E-83 1E-87 707.4 25.5 332 17-381 353-691 (691)
5 cd01384 MYSc_type_XI Myosin mo 100.0 2.6E-82 5.6E-87 697.7 26.6 319 16-384 354-673 (674)
6 cd01378 MYSc_type_I Myosin mot 100.0 4.9E-82 1.1E-86 697.5 25.5 319 16-381 352-674 (674)
7 cd01383 MYSc_type_VIII Myosin 100.0 1.1E-81 2.3E-86 693.1 25.9 326 16-381 351-677 (677)
8 cd01381 MYSc_type_VII Myosin m 100.0 2.3E-81 5.1E-86 690.8 25.8 322 16-381 348-671 (671)
9 cd01377 MYSc_type_II Myosin mo 100.0 4.8E-81 1E-85 691.6 26.3 328 17-381 362-693 (693)
10 cd01387 MYSc_type_XV Myosin mo 100.0 5.3E-81 1.1E-85 688.6 26.5 326 17-381 350-677 (677)
11 KOG0160|consensus 100.0 1.8E-79 3.9E-84 668.5 36.2 405 16-474 354-758 (862)
12 cd01382 MYSc_type_VI Myosin mo 100.0 1.1E-80 2.4E-85 690.0 26.5 320 16-380 385-715 (717)
13 cd01385 MYSc_type_IX Myosin mo 100.0 1.7E-80 3.6E-85 686.2 26.4 325 17-382 361-689 (692)
14 smart00242 MYSc Myosin. Large 100.0 2E-79 4.4E-84 679.9 25.9 320 16-382 356-677 (677)
15 KOG0161|consensus 100.0 1.5E-77 3.3E-82 697.3 39.8 372 17-425 436-815 (1930)
16 cd01379 MYSc_type_III Myosin m 100.0 2E-78 4.4E-83 664.7 25.3 282 28-381 371-653 (653)
17 cd00124 MYSc Myosin motor doma 100.0 5.6E-78 1.2E-82 670.3 25.5 329 16-381 349-679 (679)
18 KOG0162|consensus 100.0 1E-77 2.2E-82 621.6 20.9 350 16-415 369-725 (1106)
19 cd01386 MYSc_type_XVIII Myosin 100.0 5.9E-77 1.3E-81 661.4 24.5 335 16-381 360-767 (767)
20 KOG0163|consensus 100.0 2.8E-71 6E-76 574.6 42.2 389 15-458 438-837 (1259)
21 PF00063 Myosin_head: Myosin h 100.0 3.5E-74 7.5E-79 646.9 21.4 326 16-370 350-689 (689)
22 KOG4229|consensus 100.0 1.4E-43 3E-48 396.6 10.8 435 29-476 426-1008(1062)
23 KOG0160|consensus 98.8 5.9E-08 1.3E-12 108.3 15.2 86 434-522 673-758 (862)
24 COG5022 Myosin heavy chain [Cy 98.3 1E-05 2.2E-10 93.7 14.7 93 388-480 795-888 (1463)
25 KOG0520|consensus 98.2 3.3E-06 7.1E-11 94.8 7.8 125 388-529 812-938 (975)
26 KOG0520|consensus 98.0 3.7E-05 7.9E-10 86.6 10.6 102 433-534 809-920 (975)
27 KOG0164|consensus 97.8 0.00019 4.1E-09 77.4 12.5 85 435-529 697-791 (1001)
28 KOG2128|consensus 97.7 0.001 2.2E-08 77.2 16.5 145 411-556 509-704 (1401)
29 PF00612 IQ: IQ calmodulin-bin 97.3 0.00037 8.1E-09 40.9 3.6 19 483-501 2-20 (21)
30 PF00612 IQ: IQ calmodulin-bin 97.2 0.00036 7.8E-09 40.9 2.5 19 435-453 2-20 (21)
31 smart00015 IQ Short calmodulin 96.3 0.0032 6.9E-08 39.0 2.1 19 435-453 4-22 (26)
32 smart00015 IQ Short calmodulin 96.1 0.008 1.7E-07 37.2 3.3 19 483-501 4-22 (26)
33 PTZ00014 myosin-A; Provisional 95.8 0.023 5E-07 65.3 8.0 41 483-523 778-818 (821)
34 KOG2128|consensus 95.4 0.53 1.1E-05 55.6 16.8 114 392-505 513-645 (1401)
35 KOG0161|consensus 93.9 19 0.0004 45.5 25.6 125 270-404 687-817 (1930)
36 KOG4229|consensus 89.9 0.046 1E-06 63.7 -2.4 205 225-453 794-1008(1062)
37 KOG0163|consensus 81.7 20 0.00044 40.2 12.3 59 440-509 779-840 (1259)
38 KOG4427|consensus 80.2 19 0.00042 40.4 11.6 20 482-501 30-49 (1096)
39 KOG0162|consensus 76.6 3.9 8.5E-05 45.4 5.1 38 436-476 698-735 (1106)
40 KOG0165|consensus 75.9 9.8 0.00021 42.7 7.9 46 482-527 626-671 (1023)
41 KOG4427|consensus 73.4 29 0.00063 39.1 10.6 34 431-470 27-60 (1096)
42 KOG0942|consensus 68.2 6.8 0.00015 44.8 4.7 22 458-479 30-51 (1001)
43 KOG0942|consensus 62.9 18 0.00038 41.6 6.6 29 478-506 25-53 (1001)
44 cd01386 MYSc_type_XVIII Myosin 54.2 4.6 9.9E-05 46.6 0.3 16 270-285 681-696 (767)
45 COG5261 IQG1 Protein involved 50.3 1.5E+02 0.0032 34.4 10.9 18 456-473 405-422 (1054)
46 cd01384 MYSc_type_XI Myosin mo 50.2 7.7 0.00017 44.2 1.3 15 234-248 513-527 (674)
47 KOG3684|consensus 49.2 3.7E+02 0.008 28.9 13.9 38 464-501 346-383 (489)
48 cd01378 MYSc_type_I Myosin mot 48.3 8.8 0.00019 43.7 1.4 19 232-250 512-530 (674)
49 cd01387 MYSc_type_XV Myosin mo 47.5 6.4 0.00014 44.8 0.1 17 270-286 597-613 (677)
50 cd01382 MYSc_type_VI Myosin mo 47.2 16 0.00035 42.0 3.2 16 270-285 637-652 (717)
51 cd01377 MYSc_type_II Myosin mo 47.2 9.4 0.0002 43.7 1.4 16 270-285 612-627 (693)
52 KOG0165|consensus 46.8 1.7E+02 0.0036 33.5 10.5 40 438-477 174-213 (1023)
53 cd01383 MYSc_type_VIII Myosin 46.3 9.3 0.0002 43.5 1.2 16 270-285 598-613 (677)
54 cd01380 MYSc_type_V Myosin mot 45.4 7.4 0.00016 44.5 0.2 16 270-285 611-626 (691)
55 cd01379 MYSc_type_III Myosin m 45.4 7.4 0.00016 44.1 0.2 16 270-285 575-590 (653)
56 KOG0377|consensus 44.8 25 0.00054 37.1 3.8 18 435-452 18-35 (631)
57 cd01381 MYSc_type_VII Myosin m 44.4 7.9 0.00017 44.1 0.2 16 270-285 589-604 (671)
58 cd01385 MYSc_type_IX Myosin mo 41.3 9.3 0.0002 43.7 0.2 16 270-285 611-626 (692)
59 smart00242 MYSc Myosin. Large 36.6 12 0.00027 42.7 0.2 16 270-285 595-610 (677)
60 cd00124 MYSc Myosin motor doma 34.2 14 0.0003 42.3 0.1 35 36-70 376-414 (679)
61 PF08763 Ca_chan_IQ: Voltage g 31.7 45 0.00098 22.2 2.1 17 436-452 11-27 (35)
62 PF15157 IQ-like: IQ-like 29.0 45 0.00097 26.9 2.1 20 385-404 46-65 (97)
63 KOG1419|consensus 28.2 39 0.00084 36.9 2.2 22 295-316 200-221 (654)
64 KOG0377|consensus 28.0 1.1E+02 0.0025 32.5 5.4 23 457-479 17-39 (631)
65 COG5261 IQG1 Protein involved 21.4 1.2E+02 0.0026 34.9 4.5 101 409-516 314-446 (1054)
66 PF09322 DUF1979: Domain of un 20.8 69 0.0015 23.3 1.6 19 146-164 5-23 (58)
67 PF10905 DUF2695: Protein of u 20.5 75 0.0016 23.4 1.8 44 52-103 1-44 (53)
68 KOG2655|consensus 20.4 89 0.0019 32.7 3.0 35 30-64 79-114 (366)
No 1
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=100.00 E-value=3.4e-100 Score=847.80 Aligned_cols=495 Identities=42% Similarity=0.704 Sum_probs=446.3
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|..+..... -.+|||||||||||+|+.|||||||||||||||||+|++|||+.||++|.+|||+|++|+|.||++||
T Consensus 415 rIN~sL~~~~~-~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~I 493 (1463)
T COG5022 415 RINKSLDHSAA-ASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCI 493 (1463)
T ss_pred HHHhhccCccc-cccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchh
Confidence 35655554433 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh--hcccccchhhhhcCCCCCcHHHHHHHHHHhc-CCCCCCccccCCCCCCcEEEeecceEEEeccccccccccch
Q psy10328 96 DLIES--KLGILDLLDEECKMPKGSDTSWAEKLYTKCS-DKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTV 172 (560)
Q Consensus 96 ~li~~--~~Gll~lLdee~~~~~~td~~fl~~l~~~~~-~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l 172 (560)
||||+ |.|||++|||||.+|.+||++|..||.+.+. .++ +.|.+|+.++..|+|+||||+|+|+|+||++||+|++
T Consensus 494 DLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~-~~f~~~rf~~~~FvvkHYAgDVeY~veg~ldKNkD~l 572 (1463)
T COG5022 494 DLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSN-PKFKKSRFRDNKFVVKHYAGDVEYDVEGFLDKNKDPL 572 (1463)
T ss_pred HHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccC-ccccccccCCCceEEEeecccceeeccchhhhCcchh
Confidence 99998 8999999999999999999999999999884 344 8999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCC
Q psy10328 173 YEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPND 252 (560)
Q Consensus 173 ~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~ 252 (560)
++++++||..|+|+|+...+.... ...+++.++|+++.|++||.+||++|++|+||||||||||.
T Consensus 573 ~~~ll~Ll~~StNe~vs~Lf~~~~---------------~~~~K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCIkPN~ 637 (1463)
T COG5022 573 NDDLLELLKASTNEFVSTLFDDEE---------------NIESKGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCIKPNE 637 (1463)
T ss_pred hHHHHHHHhhccchHHHHhhhhhh---------------hccccCCCCcHHHHHHHHHHHHHHHHHhcCCceeEeeCCCc
Confidence 999999999999999766553110 01245788999999999999999999999999999999999
Q ss_pred ccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCc
Q psy10328 253 TKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNL 332 (560)
Q Consensus 253 ~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~ 332 (560)
.+.|+.||..+|++ ||+||||+|+|||+++|||.|++|.||+.||..|.|..
T Consensus 638 ~K~p~~fD~~mVL~----------------------------QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~ 689 (1463)
T COG5022 638 EKSPWTFDNQMVLS----------------------------QLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSK 689 (1463)
T ss_pred ccCccccchHHHHH----------------------------HHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccc
Confidence 99999999999999 88888888888999999999999999999999999976
Q ss_pred ccc-c-cccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHHHHHHHHHHHH
Q psy10328 333 KQY-N-TAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSILK 410 (560)
Q Consensus 333 ~~~-~-~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~~~~~~~~ 410 (560)
... + ...++.+.+|..||..+..++..|++|.|||||+.++++.||.+|...+..+++.||++|||+..|++|....+
T Consensus 690 ~~~~~~~~~~~~~~~~~~IL~~~~id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k 769 (1463)
T COG5022 690 SWTGEYTWKEDTKNAVKSILEELVIDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALK 769 (1463)
T ss_pred cccccccchhHHHHHHHHHHHhhcCChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211 1 11267899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccchhhHHHHhhhhhhcchhhhHHhHHHhhHHHHHHHHHHhhhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10328 411 SVATLQRWTRGYLARRLVLHMRRTRAAVRIQSAVRAFIRRRQYLRLRALVLGLQ-CAARGMLVRREVRRVRENRAALRIQ 489 (560)
Q Consensus 411 ~~~~iQ~~~R~~~~r~~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ-~~~R~~~~Rr~~~~~~~~~aa~~IQ 489 (560)
.+..+|...+++..++...+.....+++.+|..|+....|+.|...-.+++.+| ..++....+..........+++.+|
T Consensus 770 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~ 849 (1463)
T COG5022 770 RIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQ 849 (1463)
T ss_pred HHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999888766555566789999999999999999999999999999 6666666666455555568999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10328 490 TRVRGFLARRNYEATRAKIVICQASIRRFLAKKRFKKMKKEARSVEHVKKLNKGLENKIISMQQRI 555 (560)
Q Consensus 490 ~~~R~~~~Rr~~~~~~~a~i~iQ~~~R~~~aR~~~~~lk~~~~~~~~~~~~~~~~e~~~~~l~~~~ 555 (560)
++||.+..+++|..+.+.++.+|..+|.-.|++++..++.+.+.+..+...+.+++.++.++--.+
T Consensus 850 ~~~rs~~~~kr~~~L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~ 915 (1463)
T COG5022 850 KFGRSLKAKKRFSLLKKETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSL 915 (1463)
T ss_pred HHHHhhhhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999999999998888776544
No 2
>PTZ00014 myosin-A; Provisional
Probab=100.00 E-value=3e-90 Score=769.78 Aligned_cols=363 Identities=29% Similarity=0.486 Sum_probs=323.3
Q ss_pred ccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHHH
Q psy10328 17 SNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCID 96 (560)
Q Consensus 17 ~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l~ 96 (560)
+|+.+.... ....+||||||||||+|+.|||||||||||||+||++|++++|+.||++|.+|||+|..|+|.||++|||
T Consensus 450 IN~~l~~~~-~~~~~IGiLDI~GFE~f~~NSfEQLcINy~NEkLQq~F~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~id 528 (821)
T PTZ00014 450 LNATIEPPG-GFKVFIGMLDIFGFEVFKNNSLEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTEELEYTSNESVID 528 (821)
T ss_pred HHHHhcCCc-ccCceEEEEecccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCcHHHHH
Confidence 455554332 3457999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhh-cccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCC-CCCCcEEEeecceEEEeccccccccccchhH
Q psy10328 97 LIESK-LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRF-GAGSFLVKHFADDVTYDTAGFLEKNRDTVYE 174 (560)
Q Consensus 97 li~~~-~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~-~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~~ 174 (560)
||+++ .|||++|||||++|++||++|+++|++.+ ++| ++|.+|+. .+..|+|+||||+|+|+++||++||+|.|++
T Consensus 529 Lie~k~~GIl~lLDEec~~p~~tD~~f~~kl~~~~-~~~-~~f~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~ 606 (821)
T PTZ00014 529 LLCGKGKSVLSILEDQCLAPGGTDEKFVSSCNTNL-KNN-PKYKPAKVDSNKNFVIKHTIGDIQYCASGFLFKNKDVLRP 606 (821)
T ss_pred HHhcCCccHHHHHHHHhCCCCCCHHHHHHHHHHHh-cCC-CCccCCCCCCCCceEEEEeceeeeeccCcHHHhccccchH
Confidence 99965 89999999999999999999999999888 888 89988875 4679999999999999999999999999999
Q ss_pred HHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCCcc
Q psy10328 175 EQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTK 254 (560)
Q Consensus 175 ~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~~~ 254 (560)
+++++|++|++++....+.... . ......+.+||+++|+.||+.||++|++|+||||||||||+.+
T Consensus 607 ~~~~ll~~S~n~~i~~lf~~~~-------~-------~~~~~~k~~tv~s~Fk~qL~~Lm~~L~~t~phfIRCIKPN~~k 672 (821)
T PTZ00014 607 ELVEVVKASPNPLVRDLFEGVE-------V-------EKGKLAKGQLIGSQFLNQLDSLMSLINSTEPHFIRCIKPNENK 672 (821)
T ss_pred HHHHHHHhCccHHHHHHhcccc-------c-------ccccccCCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCcCccc
Confidence 9999999999999776653210 0 0012234689999999999999999999999999999999999
Q ss_pred CccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCccc
Q psy10328 255 RAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLKQ 334 (560)
Q Consensus 255 ~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~~ 334 (560)
.|+.||...|++ ||+|+||||++|+++.|||+|++|.+|+.||+.|.+...
T Consensus 673 ~p~~fd~~~V~~----------------------------QLr~~GvLE~iri~r~Gyp~R~~f~~F~~rY~~L~~~~~- 723 (821)
T PTZ00014 673 KPLDWNSSKVLI----------------------------QLHSLSILEALQLRQLGFSYRRTFAEFLSQFKYLDLAVS- 723 (821)
T ss_pred CccccchHhHHH----------------------------HhhhhhHHHHHHHHhcCCcccccHHHHHHHHHhcCcccc-
Confidence 999999999999 999999999999999999999999999999999987542
Q ss_pred cccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhh---hhhHhHHHHHHHHHHHHHHHHHHHH
Q psy10328 335 YNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLK---RCCIVIQKNVRCFLVRKKYLSILKS 411 (560)
Q Consensus 335 ~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~---~aa~~IQ~~~Rg~l~R~~~~~~~~~ 411 (560)
.....|.++.|+.+|+.+.+++.+|++|+||||||.+++..||.++..++. ..++.||++||||+.|++|.+.+.+
T Consensus 724 -~~~~~d~k~~~~~il~~~~l~~~~~~iGkTKVFlr~~~~~~Le~~~~~~~~~~~~~~~~iq~~~r~~~~r~~~~~~~~~ 802 (821)
T PTZ00014 724 -NDSSLDPKEKAEKLLERSGLPKDSYAIGKTMVFLKKDAAKELTQIQREKLAAWEPLVSVLEALILKIKKKRKVRKNIKS 802 (821)
T ss_pred -cCCCCCHHHHHHHHHHHcCCCcccEEecCCeEEEcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112358999999999999999999999999999999999999998877754 5788999999999999999998888
Q ss_pred HHHhhccchhhHHHH
Q psy10328 412 VATLQRWTRGYLARR 426 (560)
Q Consensus 412 ~~~iQ~~~R~~~~r~ 426 (560)
++.||+++|+++.++
T Consensus 803 ~~~iQ~~~R~~l~~~ 817 (821)
T PTZ00014 803 LVRIQAHLRRHLVIA 817 (821)
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888877777664
No 3
>KOG0164|consensus
Probab=100.00 E-value=2.3e-82 Score=656.02 Aligned_cols=393 Identities=37% Similarity=0.608 Sum_probs=347.2
Q ss_pred CceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHHHHHhhh-cccccc
Q psy10328 29 SRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCIDLIESK-LGILDL 107 (560)
Q Consensus 29 ~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l~li~~~-~Gll~l 107 (560)
++.||+|||||||+|+.||||||||||+||+|||.|++-+++.|||||++|||+|.+|+|++|.-++||+|.+ .||++|
T Consensus 374 ~~Vigvldiygfeif~~NSFEQfcINYCNEKLQQlFIel~LKqEQEEY~rEgI~W~~i~YFnN~iIcdLvE~~~~GIlai 453 (1001)
T KOG0164|consen 374 NTVIGVLDIYGFEIFQDNSFEQFCINYCNEKLQQLFIELVLKQEQEEYEREGIEWTHIDYFNNKIICDLVEQPHKGILAI 453 (1001)
T ss_pred ceEEEEEEeeeEEeecCCcHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCCceehhhcCCceeeehhccCccchhhh
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999977 899999
Q ss_pred hhhhhcCCC-CCcHHHHHHHHHHhcCCCCCCccccCC-------CCCCcEEEeecceEEEeccccccccccchhHHHHHH
Q psy10328 108 LDEECKMPK-GSDTSWAEKLYTKCSDKWSKHFVKPRF-------GAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIAL 179 (560)
Q Consensus 108 Ldee~~~~~-~td~~fl~~l~~~~~~~~~~~~~~~~~-------~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~~~~~~l 179 (560)
|||||+.|+ .||.+||++|...+ ++| ++|..... .-.+|.|.||||+|+|+|+||++||+|.|..|+..+
T Consensus 454 lDe~Cl~~G~vtD~tfL~~l~~~~-~~H-~Hy~sr~~~~~dksl~~~~Fri~HYAG~V~YsV~gFidKN~D~Lf~dlk~~ 531 (1001)
T KOG0164|consen 454 LDEACLRPGTVTDETFLEKLNQKL-KKH-PHYTSRKLKQTDKSLGFSDFRITHYAGDVTYSVEGFIDKNNDLLFQDLKRL 531 (1001)
T ss_pred hhHHhcCCCccchHHHHHHHHHHh-hhC-CcchhhhccccccccCccceeEEEeccceEEEEEeeeccCccHHHHHHHHH
Confidence 999999997 69999999999888 889 99875432 236999999999999999999999999999999999
Q ss_pred HHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCCccCcccc
Q psy10328 180 LHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEF 259 (560)
Q Consensus 180 l~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~~~~p~~f 259 (560)
|..|++++....++.+.. .+ ...+++++|++++|+.||..||+.|.+-.|+||||||||+.+.|+.|
T Consensus 532 m~~s~~~~l~~~fpeG~~---~~----------~~~tkRP~Tagt~Fk~Sm~~Lv~nL~sKeP~YvRcikPNe~k~~~~f 598 (1001)
T KOG0164|consen 532 MYNSKNPLLKSLFPEGNP---DI----------AEVTKRPPTAGTLFKNSMAALVKNLASKEPNYVRCIKPNEHKQPGQF 598 (1001)
T ss_pred HHhcCCchHHHhCCCCCh---hH----------HhhhcCCCcHHHHHHHHHHHHHHHHhhcCCCeEEeeccccccCcccc
Confidence 999999997776643210 00 11235678999999999999999999999999999999999999999
Q ss_pred chhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCcccccccc
Q psy10328 260 NAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLKQYNTAV 339 (560)
Q Consensus 260 d~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~~~~~~~ 339 (560)
|...|.+ |.+|+|+||.+|++++||.+|.+|..|+.||+++++..++ .+..
T Consensus 599 d~e~~~h----------------------------qv~ylGLleNvrVrrAgfahRq~Y~~FL~RYKmi~~~TWP-n~~~ 649 (1001)
T KOG0164|consen 599 DEERVRH----------------------------QVRYLGLLENVRVRRAGFAHRQPYERFLLRYKMICESTWP-NWRG 649 (1001)
T ss_pred chhhhHH----------------------------HHHHHHHHhhhhhhhcccccccchHHHHHHHHhhCcccCC-CCCC
Confidence 9999999 9999999999999999999999999999999999997744 3334
Q ss_pred CchHHHHHHHhhhcccCcccccccccceeeehh-hHHHHHHHHHhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10328 340 HSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSG-QVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSILKSVATLQRW 418 (560)
Q Consensus 340 ~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~-~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~~~~~~~~~~~~iQ~~ 418 (560)
++.++.+..+++..+.. .++.+|+||||+|.+ .+..||..|...+...++.||+.||||++|.+|++++.+++.|+ |
T Consensus 650 g~dkd~v~vL~e~~g~~-~d~a~G~TKIFIRsPrTLF~lEe~r~~~l~~lvtllQK~~RG~~~R~ry~rmka~~~ii~-w 727 (1001)
T KOG0164|consen 650 GSDKDGVKVLLEHLGLA-GDVAFGRTKIFIRSPRTLFALEEQRAERLPSLVTLLQKAWRGWLARQRYRRMKASATIIR-W 727 (1001)
T ss_pred CCchhHHHHHHHHhccc-hhhhcCceeEEEecchhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 66799999999988766 899999999999998 68999999999999999999999999999999999999998888 8
Q ss_pred chhhHHHHhhhhhhcchhhhHHhHHHhhHHHHHHHHH----------HhhhhhhHHHHHHHHHHHHHH
Q psy10328 419 TRGYLARRLVLHMRRTRAAVRIQSAVRAFIRRRQYLR----------LRALVLGLQCAARGMLVRREV 476 (560)
Q Consensus 419 ~R~~~~r~~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~----------~r~aai~iQ~~~R~~~~Rr~~ 476 (560)
||++..+ ..+..||+.+||+..++.|.+ ++.+...+|..+-.|.+++..
T Consensus 728 yR~~K~k---------s~v~el~~~~rg~k~~r~ygk~~~WP~pP~~Lr~~~~~L~~lf~rwra~~~~ 786 (1001)
T KOG0164|consen 728 YRRYKLK---------SYVQELQRRFRGAKQMRDYGKSIRWPAPPLVLREFEELLRELFIRWRAWQIL 786 (1001)
T ss_pred HHHHHHH---------HHHHHHHHHHHhhhhccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8866543 566789999999999988753 445666666655555554433
No 4
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=100.00 E-value=4.7e-83 Score=707.41 Aligned_cols=332 Identities=65% Similarity=1.043 Sum_probs=291.3
Q ss_pred ccccccCCC--CCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhH
Q psy10328 17 SNQGAAFQT--TPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPC 94 (560)
Q Consensus 17 ~~~~~~~~~--~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~ 94 (560)
+|+..+... .....+||||||||||+|+.|||||||||||||+||++|++++|+.||++|.+|||+|+.|+|.||++|
T Consensus 353 iN~~l~~~~~~~~~~~~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~iF~~eq~~Y~~EgI~~~~i~f~DN~~~ 432 (691)
T cd01380 353 INKSLNTGEVKKKQTSFIGVLDIYGFETFEKNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGIEWTFIDFYDNQPC 432 (691)
T ss_pred HHHHhCcCcccCCccceEEEEecCcccccCCCCHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCHHH
Confidence 455555442 345679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccccchhhhhcCCCCCcHHHHHHHHHHhcC--CCCCCccccCCCCCCcEEEeecceEEEeccccccccccch
Q psy10328 95 IDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSD--KWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTV 172 (560)
Q Consensus 95 l~li~~~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~--~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l 172 (560)
||||++|.|||++|||||.+|++||++|++||+..| + +| +.|.+|+..+..|+|+||||+|+|+++||++||+|.+
T Consensus 433 ldLie~~~Gil~lLdee~~~p~~td~~f~~kl~~~~-~~~~~-~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKNrD~l 510 (691)
T cd01380 433 IDLIESKLGILSLLDEECRLPKGSDESWAQKLYNKL-PKKKN-PHFEKPRFGQTSFTVKHFADDVEYDVDGFLEKNRDTV 510 (691)
T ss_pred HHHHhCCCchHHHhHHhhcCCCCChHHHHHHHHHHh-cccCC-CCccCCCCCCCeeEEEEccCCcccccccHHHhccccc
Confidence 999999999999999999999999999999999988 5 67 8999998888899999999999999999999999999
Q ss_pred hHHHHHHHHhcCcccccccchhhhhhhHHHhh---ccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecC
Q psy10328 173 YEEQIALLHSSTNTSQQSSTKSGAKRMAALAA---SKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIK 249 (560)
Q Consensus 173 ~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIk 249 (560)
+++++++|++|++++....+.......+.... .++...+....+.+.+||+++|+.||++||++|++|+||||||||
T Consensus 511 ~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~qL~~L~~~L~~t~phfIRCIK 590 (691)
T cd01380 511 SDEHLDVLKASKNPFLKEVLDAAELASSSSSSAKSKPAAKRPPKRAKQHKPTVGSQFKSSLIELMSTLNSTNPHYIRCIK 590 (691)
T ss_pred cHHHHHHHHhCccHHHHHHhhhhcccccccccccccccccccccccccCCCcHHHHHHHHHHHHHHHHhccCCeEEEEeC
Confidence 99999999999999966554221000000000 000011112344577899999999999999999999999999999
Q ss_pred CCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhh
Q psy10328 250 PNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLC 329 (560)
Q Consensus 250 PN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~ 329 (560)
||+.+.|+.||...|++ ||+|+||||++|+++.|||+|++|.+|+.||+.|+
T Consensus 591 PN~~k~~~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gyp~R~~~~~F~~ry~~L~ 642 (691)
T cd01380 591 PNDEKKPFKFEPKRVLQ----------------------------QLRACGVLETIRISAAGFPSRWTYEEFAQRYRVLV 642 (691)
T ss_pred CCcccCcCccCHHHHHH----------------------------HHHHhchHHHHHHHhccCCccccHHHHHHHHHHhC
Confidence 99999999999999999 99999999999999999999999999999999999
Q ss_pred cCccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHH
Q psy10328 330 GNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381 (560)
Q Consensus 330 ~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r 381 (560)
+... ....|.++.|+.+|+.+..++.+|++|+||||||.+++..||+.|
T Consensus 643 ~~~~---~~~~~~k~~~~~iL~~~~~~~~~~~~G~tkVFlk~~~~~~LE~~R 691 (691)
T cd01380 643 PSKE---LWKSDPKQLCENILTKVIEDEDKYQFGKTKIFFRAGQVAFLEKLR 691 (691)
T ss_pred cccc---ccCCCHHHHHHHHHHHhCCCcccEEecCceEEECcCHHHHHhhcC
Confidence 9762 233688999999999998888999999999999999999999764
No 5
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=100.00 E-value=2.6e-82 Score=697.71 Aligned_cols=319 Identities=44% Similarity=0.746 Sum_probs=288.3
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+..+.+. ....+||||||||||+|+.|||||||||||||+||++|++++|+.||++|.+|||+|+.|+|.||++||
T Consensus 354 ~iN~~l~~~~-~~~~~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~if~~eq~eY~~EgI~~~~i~~~DN~~~l 432 (674)
T cd01384 354 KINSSIGQDP-DSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVL 432 (674)
T ss_pred HHHHHhcCCC-CCCeEEEEEecccccccCcCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccCCChHHHH
Confidence 3566655442 345799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCCCCCcEEEeecceEEEeccccccccccchhH
Q psy10328 96 DLIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYE 174 (560)
Q Consensus 96 ~li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~~ 174 (560)
|||++ |.|||++|||||++|++||++|+++|...+ ++| ++|.+|+..+..|+|+||||+|+|+++||++||+|.+++
T Consensus 433 dLie~~~~Gil~lLdee~~~p~~td~~f~~kl~~~~-~~~-~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~ 510 (674)
T cd01384 433 DLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KDH-KRFEKPKLSRTAFTIDHYAGDVTYQTDQFLDKNKDYVVA 510 (674)
T ss_pred HHHhcCCccHHHHHHHHHcCCCCCHHHHHHHHHHHh-cCC-CCCCCCCCCCCeeEEEEecceeeecCCCHHHhcCCcccH
Confidence 99997 689999999999999999999999999888 888 899999888889999999999999999999999999999
Q ss_pred HHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCCcc
Q psy10328 175 EQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTK 254 (560)
Q Consensus 175 ~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~~~ 254 (560)
+++++|++|++++....+.... ....+..+..||+++|+.||++||++|++|+||||||||||+.+
T Consensus 511 ~~~~ll~~S~n~~i~~lf~~~~--------------~~~~~~~k~~tv~~~fk~~L~~L~~~L~~t~~hfIRCIKPN~~k 576 (674)
T cd01384 511 EHQALLNASNCSFVAGLFPPLP--------------EETSKSSKFSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVL 576 (674)
T ss_pred HHHHHHHhCchHHHHHHhcccc--------------cccccccccccHHHHHHHHHHHHHHHHhccCCeEEEEeCCCccc
Confidence 9999999999999766553210 00123345789999999999999999999999999999999999
Q ss_pred CccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCccc
Q psy10328 255 RAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLKQ 334 (560)
Q Consensus 255 ~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~~ 334 (560)
+|+.||...|++ ||+|+||||++|+++.|||+|++|.+|+.||+.|++...
T Consensus 577 ~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gyp~r~~~~~F~~ry~~L~~~~~- 627 (674)
T cd01384 577 KPGIFENENVLQ----------------------------QLRCGGVLEAIRISCAGYPTRRTFDEFLDRFGILAPEVL- 627 (674)
T ss_pred CCCccCHHHHHH----------------------------HHHHcchHHHHHHHhcCCCccccHHHHHHHHHHhCcccc-
Confidence 999999999999 999999999999999999999999999999999998752
Q ss_pred cccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhh
Q psy10328 335 YNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEK 384 (560)
Q Consensus 335 ~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~ 384 (560)
....+.++.|+.+|+.+.. .+|++|+||||||.+++..||..|.+.
T Consensus 628 --~~~~~~~~~~~~il~~~~~--~~~~~GktkVFlr~~~~~~LE~~R~~~ 673 (674)
T cd01384 628 --KGSSDDKAACKKILDKMGL--KGYQIGKTKVFLRAGQMAELDARRTEV 673 (674)
T ss_pred --cCCCcHHHHHHHHHHhCCC--CCEEecCeeEEEcCCHHHHHHHHHHhc
Confidence 2235789999999998754 689999999999999999999998764
No 6
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=100.00 E-value=4.9e-82 Score=697.54 Aligned_cols=319 Identities=40% Similarity=0.681 Sum_probs=288.7
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+.+.........+||||||||||+|+.|||||||||||||+||++|++++|+.||++|.+|||+|..|+|.||++||
T Consensus 352 ~IN~~l~~~~~~~~~~IgILDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~~F~~eq~~Y~~EgI~~~~i~f~DN~~~l 431 (674)
T cd01378 352 RINKALQVKSPGKNKVIGVLDIYGFEIFQKNSFEQFCINYVNEKLQQIFIELTLKAEQEEYVREGIKWTPIEYFNNKIVC 431 (674)
T ss_pred HHHHHhcCCcccCcceEEEEecccccccccccHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCcCChHHHH
Confidence 35666665544567799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh--hcccccchhhhhcCC-CCCcHHHHHHHHHHhcCCCCCCccccCCCCCCcEEEeecceEEEeccccccccccch
Q psy10328 96 DLIES--KLGILDLLDEECKMP-KGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTV 172 (560)
Q Consensus 96 ~li~~--~~Gll~lLdee~~~~-~~td~~fl~~l~~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l 172 (560)
|||++ |.|||++|||||++| ++||++|++||+..+ ++| +++.+|+..+..|+|+||||+|+|+++||++||+|.+
T Consensus 432 dLie~~~~~Gil~lLdee~~~p~~~tD~~~~~kl~~~~-~~~-~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNrD~l 509 (674)
T cd01378 432 DLIEGKRPPGIFSILDDVCATPHEGTDQTFLEKLNKKF-SSH-PHSDHFSSGSDEFRIKHYAGDVTYSVEGFCDKNKDTL 509 (674)
T ss_pred HHHhcCCCcchHHHHHHHHcCCCCCChHHHHHHHHHHh-ccC-CCCCCCCCCCCcEEEEEeceeeeecCcCHHHhhcchh
Confidence 99997 689999999999999 999999999999888 888 7788888788899999999999999999999999999
Q ss_pred hHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCC
Q psy10328 173 YEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPND 252 (560)
Q Consensus 173 ~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~ 252 (560)
+++++++|++|++++....+... ....++.+.+||+++|+.||++||++|++|+||||||||||+
T Consensus 510 ~~~~~~ll~~S~n~~i~~lf~~~---------------~~~~~~~~~~tv~~~fk~qL~~Lm~~L~~t~phfIRCIKPN~ 574 (674)
T cd01378 510 FKDLIELMQSSSNPFLRSLFPEK---------------SDADSKKRPTTAGFKIKTSANALVETLMKCTPHYIRCIKPNE 574 (674)
T ss_pred hHHHHHHHHhCchHHHHHHhccc---------------ccccccCCCCcHHHHHHHHHHHHHHHHHccCCeEEEEECCCc
Confidence 99999999999999976665321 001123456899999999999999999999999999999999
Q ss_pred ccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCc
Q psy10328 253 TKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNL 332 (560)
Q Consensus 253 ~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~ 332 (560)
.++|+.||...|++ ||+|+||||++|+++.|||+|++|.+|+.||+.|++..
T Consensus 575 ~k~p~~Fd~~~V~~----------------------------QLr~~GvLE~iri~r~Gyp~R~~~~~F~~rY~~L~~~~ 626 (674)
T cd01378 575 TKSPNDFDESRVLH----------------------------QVKYLGLLENVRVRRAGFAYRQTFDKFLQRYKLLSPKT 626 (674)
T ss_pred cCCchhcCHHHHHH----------------------------HHHhcChHHHHHHHhcCCCccccHHHHHHHHHHhCccc
Confidence 99999999999999 99999999999999999999999999999999999874
Q ss_pred cccccccCchHHHHHHHhhhcccCcccccccccceeeehh-hHHHHHHHH
Q psy10328 333 KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSG-QVAYLEKLR 381 (560)
Q Consensus 333 ~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~-~~~~Le~~r 381 (560)
. .....+.++.|+.+|+.+.+++.+|++|+||||||.+ ++..||..|
T Consensus 627 ~--~~~~~~~k~~~~~iL~~~~~~~~~~~~GkTkVFlr~~~~l~~le~~R 674 (674)
T cd01378 627 W--PTWPGDAKSGVEVILKDLNIDPEEYQMGKTKIFIRNPETLFALEEMR 674 (674)
T ss_pred c--cccCCCHHHHHHHHHHHcCCCcccEEecCceEEEeCchhHHHHHhcC
Confidence 1 2223689999999999999999999999999999997 799998764
No 7
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=100.00 E-value=1.1e-81 Score=693.10 Aligned_cols=326 Identities=44% Similarity=0.708 Sum_probs=283.9
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+.+.........+||||||||||+|+.|||||||||||||+||++|++++|+.||++|++|||+|..|+|.||++||
T Consensus 351 ~IN~~l~~~~~~~~~~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~l 430 (677)
T cd01383 351 QINKSLEVGKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFEDNQECL 430 (677)
T ss_pred HHHHHhcCCcccccceEEEeeccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHH
Confidence 35666655443456799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCCCCCcEEEeecceEEEeccccccccccchhH
Q psy10328 96 DLIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYE 174 (560)
Q Consensus 96 ~li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~~ 174 (560)
|||++ |.|||++|||||.+|++||++|++||...+ ++| ++|.+++ +..|+|+||||+|+|+++||++||+|.+++
T Consensus 431 dLie~kp~Gil~lLdee~~~p~~tD~~f~~kl~~~~-~~~-~~~~~~~--~~~F~I~HyAG~V~Y~v~gfleKNrD~l~~ 506 (677)
T cd01383 431 DLFEKKPLGLLSLLDEESTFPNATDLTFANKLKQHL-KTN-SCFRGER--GGAFTVRHYAGEVTYDTTGFLEKNRDLLHS 506 (677)
T ss_pred HHHhcCCccHHHHhHHHHcCCCCCHHHHHHHHHHHh-CCC-CCCCCCC--CCceEEEEeccceeecCCChHHhccccccH
Confidence 99996 589999999999999999999999999877 888 8887764 568999999999999999999999999999
Q ss_pred HHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCCcc
Q psy10328 175 EQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTK 254 (560)
Q Consensus 175 ~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~~~ 254 (560)
+++++|++|++++..........+ + ...+ .+........+..||+++|+.||++||++|++|+||||||||||+.+
T Consensus 507 ~~~~ll~~S~~~~~~~f~~~~~~~-s-~~~~--~~~~~~~~~~~~~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN~~k 582 (677)
T cd01383 507 DSIQLLSSCKCQLPQLFASSMLIQ-S-PVVG--PLYVASAADSQKLSVGTKFKGQLFKLMQQLENTTPHFIRCIKPNNKQ 582 (677)
T ss_pred HHHHHHHhCchHHHHHHHhhhhcc-c-cccc--cccccccccccCcchHHHHHHHHHHHHHHHhCCCCeEEEEECccccc
Confidence 999999999998754221110000 0 0000 00111223346789999999999999999999999999999999999
Q ss_pred CccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCccc
Q psy10328 255 RAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLKQ 334 (560)
Q Consensus 255 ~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~~ 334 (560)
.|+.||...|++ ||+|+||||++++++.|||+|++|.+|+.||+.|++...
T Consensus 583 ~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gyp~R~~~~~F~~rY~~L~~~~~- 633 (677)
T cd01383 583 LPGIYEQGLVLQ----------------------------QLRCCGVLEVVRISRSGYPTRMTHQEFARRYGFLLLENI- 633 (677)
T ss_pred CcCccchhhhHH----------------------------HhhhccHHHHHHHHhcCCCccccHHHHHHHHHHhCcccc-
Confidence 999999999999 999999999999999999999999999999999999752
Q ss_pred cccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHH
Q psy10328 335 YNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381 (560)
Q Consensus 335 ~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r 381 (560)
...|++..|+.+|+.+..++++|++|+||||||.++++.||..|
T Consensus 634 ---~~~~~~~~~~~il~~~~~~~~~~~~GkTKVFlr~~~~~~LE~~r 677 (677)
T cd01383 634 ---ASQDPLSVSVAILQQFNILPEMYQVGYTKLFFRTGQIGALEDTR 677 (677)
T ss_pred ---CCCCHHHHHHHHHHhcCCCcccEEeccceEEecCcHHHHHhhcC
Confidence 23678899999999999999999999999999999999999764
No 8
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=100.00 E-value=2.3e-81 Score=690.83 Aligned_cols=322 Identities=44% Similarity=0.703 Sum_probs=288.4
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+..+...+....+||||||||||+|+.|||||||||||||+||++|++++|+.||++|.+|||+|..|+|.||++||
T Consensus 348 ~IN~~l~~~~~~~~~~IgiLDIfGFE~f~~NsfEQLcINy~NEkLQ~~f~~~vf~~eq~eY~~EgI~~~~i~f~dN~~~l 427 (671)
T cd01381 348 KINAAIYKPVQQSRNSIGVLDIFGFENFDVNSFEQLCINFANENLQQFFVQHIFKLEQEEYNLEHINWQHIEFVDNQDAL 427 (671)
T ss_pred HHHHHhcCccccccceEEEEecCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccCccCcHHHH
Confidence 46666655444567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCC-CCCCcEEEeecceEEEeccccccccccchh
Q psy10328 96 DLIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRF-GAGSFLVKHFADDVTYDTAGFLEKNRDTVY 173 (560)
Q Consensus 96 ~li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~-~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~ 173 (560)
|||++ |.|||++|||||++|++||++|++||+..| ++| +.|.+|+. .+..|+|+||||+|+|+++||++||+|.++
T Consensus 428 dLie~kp~Gil~lLDee~~~p~~td~~f~~kl~~~~-~~~-~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~ 505 (671)
T cd01381 428 DLIAIKPLNIMSLIDEESKFPKGTDQTMLEKLHSQH-GLH-SNYLKPKSTQETQFGINHFAGVVFYDTRGFLEKNRDTFS 505 (671)
T ss_pred HHHhcCCCCcceechHhhcCCCCCHHHHHHHHHHHh-cCC-CCcccCCCCCCCceEEEEecceEeeccCCHHHhccchhh
Confidence 99995 589999999999999999999999999988 888 88887764 467999999999999999999999999999
Q ss_pred HHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCCc
Q psy10328 174 EEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDT 253 (560)
Q Consensus 174 ~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~~ 253 (560)
++++++|++|++++....+..... .+.....+..||+++|+.||+.||++|++|.||||||||||+.
T Consensus 506 ~~~~~ll~~S~n~~i~~lf~~~~~-------------~~~~~~~k~~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN~~ 572 (671)
T cd01381 506 GDLSQLVQSSKNKFLKQIFQADVE-------------MGAETRKKKPTLSSQFRRSLDLLMRTLSSCQPFFIRCIKPNEY 572 (671)
T ss_pred HHHHHHHHhChHHHHHHHhccccc-------------ccccccccCCcHHHHHHHHHHHHHHHHhcCCCeEEEEeCcchh
Confidence 999999999999997665532100 0012234678999999999999999999999999999999999
Q ss_pred cCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCcc
Q psy10328 254 KRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLK 333 (560)
Q Consensus 254 ~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~ 333 (560)
+.|+.||...|++ ||+|+||||++|+++.|||+|++|.+|+.||+.|++...
T Consensus 573 k~~~~fd~~~V~~----------------------------QLr~~Gvle~iri~r~Gyp~r~~~~~F~~rY~~L~~~~~ 624 (671)
T cd01381 573 KEPMVFDRELCVR----------------------------QLRYSGMMETIRIRRAGYPIRHTFREFVERYRVLVPGVK 624 (671)
T ss_pred hccCccChHHHHH----------------------------HHHhcchHHHHHHHHcCcCceecHHHHHHHHHHhCcccc
Confidence 9999999999999 999999999999999999999999999999999999752
Q ss_pred ccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHH
Q psy10328 334 QYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381 (560)
Q Consensus 334 ~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r 381 (560)
+ .....+.+..|+.+++.+..++++|++|+||||||.+.+..||+.|
T Consensus 625 ~-~~~~~~~~~~~~~il~~~~~~~~~~~~G~TkVFlr~~~~~~LE~~r 671 (671)
T cd01381 625 P-AYKQDCLAGLAQRICEAVLLADDDWQLGKTKVFLKDHHDLLLEQER 671 (671)
T ss_pred c-ccccccHHHHHHHHHHHcCCCcccEEeccceEEECcCHHHHHhhcC
Confidence 2 1223578899999999998889999999999999999999999764
No 9
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=100.00 E-value=4.8e-81 Score=691.60 Aligned_cols=328 Identities=45% Similarity=0.714 Sum_probs=284.9
Q ss_pred ccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCcccccccc-CCHhHH
Q psy10328 17 SNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFY-DNQPCI 95 (560)
Q Consensus 17 ~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~-dn~~~l 95 (560)
+|+.++.+ .+...+||||||||||+|+.|||||||||||||+||++|++++|+.||++|++|||+|+.|+|. ||.+||
T Consensus 362 IN~~l~~~-~~~~~~IgiLDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~~~~dn~~~l 440 (693)
T cd01377 362 INKTLDTK-QQRAYFIGVLDIAGFEIFDFNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGLDLQPTI 440 (693)
T ss_pred HHHHhCCC-CCCCceEEEEecccccccCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCCcHHHH
Confidence 45555443 3456799999999999999999999999999999999999999999999999999999999994 999999
Q ss_pred HHHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCc--cccCCCCCCcEEEeecceEEEeccccccccccch
Q psy10328 96 DLIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHF--VKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTV 172 (560)
Q Consensus 96 ~li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~--~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l 172 (560)
|||++ |.|||++|||||.+|++||++|+++|+..| +++ +.| .+++..+..|+|+||||+|+|+++||++||+|.+
T Consensus 441 dLie~~~~Gil~lLdee~~~~~~tD~~~~~kl~~~~-~~~-~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l 518 (693)
T cd01377 441 DLIEKNPMGILSLLDEECVFPKATDKTFVEKLYDNH-LGK-SKFKKPKKGKAKAHFSLVHYAGTVDYNIDGWLEKNKDPL 518 (693)
T ss_pred HHHhcCCCchHhhhhHHhcCCCCCHHHHHHHHHHHh-cCC-CcccccCCCCCCCcEEEEeeceeEeeccccHHHhccccc
Confidence 99997 799999999999999999999999999888 666 665 4455567899999999999999999999999999
Q ss_pred hHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCC
Q psy10328 173 YEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPND 252 (560)
Q Consensus 173 ~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~ 252 (560)
+++++++|++|++++....+.......+ ...........+.+..||+++|+.||++||++|++|+||||||||||+
T Consensus 519 ~~~~~~ll~~S~~~~i~~lf~~~~~~~~----~~~~~~~~~~~~~~~~tv~~~F~~qL~~L~~~L~~t~~hfIRCIKPN~ 594 (693)
T cd01377 519 NDNVVGLLKKSSDKLVAELFKDYAEASG----DGGGGGGKKKKGGSFRTVSQLYKEQLNKLMTTLRSTNPHFVRCIIPNE 594 (693)
T ss_pred cHHHHHHHHhCchHHHHHHhhhhccccc----ccccccCCCCcCCccccHHHHHHHHHHHHHHHHhccCCeEEEEeCcCc
Confidence 9999999999999997665532110000 000000111223346899999999999999999999999999999999
Q ss_pred ccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCc
Q psy10328 253 TKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNL 332 (560)
Q Consensus 253 ~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~ 332 (560)
.+.|+.||...|++ ||+|+||||++|+++.|||+|++|.+|+.||+.|++..
T Consensus 595 ~k~p~~Fd~~~V~~----------------------------QLr~~GvlEtvrirr~Gyp~R~~f~~F~~rY~~L~~~~ 646 (693)
T cd01377 595 EKKPGKLDAHLVLD----------------------------QLRCNGVLEGIRICRKGFPNRILYAEFRQRYEILAPNA 646 (693)
T ss_pred cCCCCccCHHHHHH----------------------------HHHhcchHHHHHHHHcCCCccccHHHHHHHHHHhCccc
Confidence 99999999999999 99999999999999999999999999999999999875
Q ss_pred cccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHH
Q psy10328 333 KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381 (560)
Q Consensus 333 ~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r 381 (560)
. .....+.++.|+.+|+.+.+++.+|++|+||||||.+++..||.+|
T Consensus 647 ~--~~~~~d~k~~~~~iL~~~~~~~~~~~~G~TKVFlk~~~~~~LE~~R 693 (693)
T cd01377 647 I--PKGFMDSKKASEKILKSLELDPEQYRFGHTKVFFRAGVLAHLEEMR 693 (693)
T ss_pred c--cccCCCHHHHHHHHHHhcCCCcccEEecCCeEeECccHHHHHhhcC
Confidence 2 1224688999999999999999999999999999999999999764
No 10
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=100.00 E-value=5.3e-81 Score=688.65 Aligned_cols=326 Identities=35% Similarity=0.558 Sum_probs=282.0
Q ss_pred ccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHHH
Q psy10328 17 SNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCID 96 (560)
Q Consensus 17 ~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l~ 96 (560)
+|+....+ ....+||||||||||+|+.|||||||||||||+||++|++++|+.||++|.+|||+|..|+|.||++|||
T Consensus 350 iN~~l~~~--~~~~~IgILDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~vF~~eq~eY~~EgI~~~~i~f~dN~~~ld 427 (677)
T cd01387 350 VNALVSPT--QDTLSIAILDIYGFEDLSFNSFEQLCINYANENLQYLFNKIVFQEEQEEYIREQLDWTEIAFADNQPVIN 427 (677)
T ss_pred HHHhcCCC--CCCceEEEEecCccccCCCCCHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCcCChHHHHH
Confidence 45544432 3357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCCCCCcEEEeecceEEEeccccccccccchhHH
Q psy10328 97 LIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEE 175 (560)
Q Consensus 97 li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~~~ 175 (560)
||++ |.|||++|||||.+|++||++|++|+...| ++| +.|.+|+.....|+|+||||+|+|+++||++||+|.++++
T Consensus 428 Li~~kp~Gil~lLdee~~~p~~td~~~~~kl~~~~-~~~-~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~ 505 (677)
T cd01387 428 LISLKPYGILRILDDQCCFPQATDHTFLQKCHYHH-GAN-PLYSKPKMPLPEFTIKHYAGKVTYQVHKFLDKNHDQVRQD 505 (677)
T ss_pred HHhcCCCchHHHHHHHhcCCCCchHHHHHHHHHhc-cCC-ccccCCCCCCCeeEEEEeCceeeecCCChHHhccchhhHH
Confidence 9995 589999999999999999999999999887 888 8999998778899999999999999999999999999999
Q ss_pred HHHHHHhcCcccccccchhhhhhhHHHhhccccCCCC-CccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCCcc
Q psy10328 176 QIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPS-SKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTK 254 (560)
Q Consensus 176 ~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~~~ 254 (560)
++++|.+|+++++...+.....+.+. .+ .+.++ .+.+.+.+||+++|+.||++||++|++|+||||||||||+.+
T Consensus 506 ~~~ll~~S~~~~i~~lf~~~~~~~~~---~~-~~~~s~~~~~~~~~tv~~~f~~sL~~L~~~l~~t~phfIRCIKPN~~k 581 (677)
T cd01387 506 VLDLFVSSRTRVVAHLFSSHAAQRAP---KR-LGKSSSGTRLYKAHTVAAKFQQSLLDLVEKMERCNPLFVRCLKPNHKK 581 (677)
T ss_pred HHHHHHhCCcHHHHHHHhhhhccccc---cc-ccCCCccccccCCCcHHHHHHHHHHHHHHHHhcCCCeEEEEECCCCcC
Confidence 99999999999976655321000000 00 00111 122345789999999999999999999999999999999999
Q ss_pred CccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCccc
Q psy10328 255 RAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLKQ 334 (560)
Q Consensus 255 ~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~~ 334 (560)
.|+.||...|++ ||+|+||||++++++.|||+|++|.+|+.||+.|++....
T Consensus 582 ~~~~Fd~~~V~~----------------------------QLr~~GvlE~vri~r~Gyp~r~~~~~F~~rY~~L~~~~~~ 633 (677)
T cd01387 582 EPGLFEPDVVMA----------------------------QLRYSGVLETVRIRKEGFPVRLPFQHFIDRYRCLVALKLA 633 (677)
T ss_pred CccccChHHHHH----------------------------HHHHhchHHHHHHHHccCCccccHHHHHHHHHHhCccccc
Confidence 999999999999 9999999999999999999999999999999999997521
Q ss_pred cccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHH
Q psy10328 335 YNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381 (560)
Q Consensus 335 ~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r 381 (560)
...+.+..+..++..+..++.+|++|+||||||.+++..||..|
T Consensus 634 ---~~~~~~~~~~~ll~~~~~~~~~~~iG~TkVFlk~~~~~~LE~~r 677 (677)
T cd01387 634 ---RPAPGDMCVSELSRLCGVEPPMYRVGASKLFLKEHLHQLLESMR 677 (677)
T ss_pred ---CCCcHHHHHHHHHHHcCCCcccEEecceeEEEcCCHHHHHHhcC
Confidence 11223444578888888888999999999999999999999764
No 11
>KOG0160|consensus
Probab=100.00 E-value=1.8e-79 Score=668.49 Aligned_cols=405 Identities=51% Similarity=0.807 Sum_probs=371.1
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|.-++........+||||||||||.|+.|||||||||||||+||+.|++|+|+.||++|..|||+|..++|.||++|+
T Consensus 354 ~in~sL~~~~~~~~~~igVLDiYgFEsF~~nsfeQfcINyanEkLqq~fnqHvfk~Eqeey~~e~i~Ws~ief~dNq~~~ 433 (862)
T KOG0160|consen 354 KINGSLGANDPKAERFIGVLDIYGFESFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYTKEEIDWSGIEFRDNQECL 433 (862)
T ss_pred HhhcccccCCCCccceeeeehcccccccccCcHHHhhhhhHHHHhhHHHHHHHHHHHHHHHHhhccccccccCcCccchh
Confidence 46666776555567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCCCCCcEEEeecceEEEeccccccccccchhHH
Q psy10328 96 DLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEE 175 (560)
Q Consensus 96 ~li~~~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~~~ 175 (560)
+++++|.|++++|||+|.+|.++|++|..||...+ .++ +.|.+|+.+...|+|.||||+|+|++.||++||+|.++++
T Consensus 434 ~lie~~~Gi~~Llde~c~lp~~t~~~~a~KL~~~~-~~~-~~f~kpr~~~~~f~v~hyAg~v~y~~~~fL~knrd~v~~e 511 (862)
T KOG0160|consen 434 DLIEKPLGILALLDEECMLPKGTDETLAQKLYQTL-KRN-KRFTKPRLSRTDFRVAHYAGDVTYDTEGFLEKNRDYVSDE 511 (862)
T ss_pred hhhccccchhhccchhccCCCCCcchHHHHHHHHh-ccC-CccCCCCCCcCCcccccccCccccchhhhccCCccccCHH
Confidence 99999999999999999999999999999999887 677 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCCccC
Q psy10328 176 QIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKR 255 (560)
Q Consensus 176 ~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~~~~ 255 (560)
..+++..|++++.......... ...+..++.||+++|+.+|..||++|++|.||||||||||+.+.
T Consensus 512 l~~ll~~s~~~~~~~~~~~~~~--------------~~~~~~~~~tv~s~fk~~l~~Lm~~l~~t~phyircikPn~~~~ 577 (862)
T KOG0160|consen 512 LIDLLLASDCHFVAGLAPPLRA--------------DSSAKSKRSTVGSQFKLQLISLMETLNSTPPHYIRCIKPNAEKK 577 (862)
T ss_pred HHhhhhhcccchHHHhccchhc--------------chhhhhhcccHHHHHHHHHHHHHHHhcCCCCCCceeeCcchhcc
Confidence 9999999999986554421000 01134567899999999999999999999999999999999999
Q ss_pred ccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCcccc
Q psy10328 256 AFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLKQY 335 (560)
Q Consensus 256 p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~~~ 335 (560)
|..||...|++ ||++||+||++|++..|||.|+++.||+.||..|+| .
T Consensus 578 p~~fe~~~v~~----------------------------Qlr~~GvLetiRiS~~g~P~r~~~~Ef~~r~~~L~~-~--- 625 (862)
T KOG0160|consen 578 PQIFENNLVLQ----------------------------QLRCCGVLETIRISCAGFPTRWTFIEFVNRYGILMP-N--- 625 (862)
T ss_pred cccccccceee----------------------------eccccceehhheeccccCCccccHHHHHHHHhhcCc-c---
Confidence 99999999999 666777777777778889999999999999999999 3
Q ss_pred ccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10328 336 NTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSILKSVATL 415 (560)
Q Consensus 336 ~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~~~~~~~~~~~~i 415 (560)
... .|+...|+.+|+.++.+ .|++|+|+||++.+....||..|...+..+++.||+.+|+|+.|+.|..++.+++.|
T Consensus 626 ~~~-~~~~~~~~~il~~~~~~--~yq~g~tkif~r~gq~~~le~~R~~vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~ 702 (862)
T KOG0160|consen 626 DSA-SDDLSLCKVILEKLGLE--LYQIGKTKIFLRAGQIAVLEARRSDVLSAAKVLIQRQIRGYLARKKFLQLRSAVIII 702 (862)
T ss_pred hhc-ccchHHHHHHHHHhchh--ceeeeeeeeeeccchhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 45599999999999877 999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhHHHHhhhhhhcchhhhHHhHHHhhHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q psy10328 416 QRWTRGYLARRLVLHMRRTRAAVRIQSAVRAFIRRRQYLRLRALVLGLQCAARGMLVRR 474 (560)
Q Consensus 416 Q~~~R~~~~r~~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~~~R~~~~Rr 474 (560)
|+.+||+++|+ ... +..||+.||+.||++..|+.|...+.+++.+|+.+|++++|.
T Consensus 703 Q~~~rG~~~r~--~~~-~~~aai~~q~~~r~~~~r~~y~~~~~~~~~~qs~~r~~~~r~ 758 (862)
T KOG0160|consen 703 QAYSRGVLARR--ETE-REAAAIGIQKECRSYLNRRRYRALIPASITIQSGVRAMLARN 758 (862)
T ss_pred hhhhhHHHHHH--hhH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999997 333 678999999999999999999999999999999999999998
No 12
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=100.00 E-value=1.1e-80 Score=690.04 Aligned_cols=320 Identities=37% Similarity=0.610 Sum_probs=283.9
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+.++.+ ....+||||||||||+|+.|||||||||||||+||++|++++|..||++|++|||+|+.|+|.||++||
T Consensus 385 ~IN~~l~~~--~~~~~IgiLDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~if~~Eq~~Y~~EgI~~~~i~~~DN~~~l 462 (717)
T cd01382 385 RVNQCFPFE--TSSNFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQREGLGVNEVHYVDNQDCI 462 (717)
T ss_pred HHHHhcCCC--CCCcEEEEEeccccccCCCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccHHHH
Confidence 467766554 356799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCC----------CCCcEEEeecceEEEecccc
Q psy10328 96 DLIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG----------AGSFLVKHFADDVTYDTAGF 164 (560)
Q Consensus 96 ~li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~----------~~~F~I~H~aG~V~Y~v~gf 164 (560)
|||++ |.|||++|||||++|++||++|+++|+..+ ++| +.|..|+.+ +..|+|+||||+|+|+++||
T Consensus 463 dLie~k~~Gil~lLDee~~~p~~tD~~f~~kl~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gf 540 (717)
T cd01382 463 DLIEAKLNGILDILDEENRLPQPSDQHFTSVVHQKH-KDH-FRLTIPRKSKLAVHRNLRDDEGFIIRHFAGAVCYETTQF 540 (717)
T ss_pred HHHhcCCccHHHHhHHHhcCCCCCHHHHHHHHHHHh-cCC-cCccCCCccccccccccCCCCCEEEEecceeEeecCCCh
Confidence 99996 479999999999999999999999999988 777 677665432 35899999999999999999
Q ss_pred ccccccchhHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCce
Q psy10328 165 LEKNRDTVYEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHY 244 (560)
Q Consensus 165 l~kN~d~l~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hf 244 (560)
++||+|.++++++++|++|++++....+...... + .......+.+..||+++|+.||++||++|++|+|||
T Consensus 541 leKNkD~l~~~~~~ll~~S~n~~i~~lf~~~~~~-------~--~~~~~~~k~~~~tv~~~fk~qL~~Lm~~L~~t~~hf 611 (717)
T cd01382 541 VEKNNDALHMSLESLICESKDKFLRSLFESSTNN-------N--DTKQKAGKLSFISVGNKFKTQLNLLLEKLRSTGSSF 611 (717)
T ss_pred HHhcCccccHHHHHHHHhCchHHHHHHhcccccc-------c--cccccccCccCccHHHHHHHHHHHHHHHHhccCCee
Confidence 9999999999999999999999976665321000 0 000111234567999999999999999999999999
Q ss_pred eeecCCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHH
Q psy10328 245 IRCIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNR 324 (560)
Q Consensus 245 IrCIkPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~r 324 (560)
|||||||+.+.|+.||...|++ ||+|+||||++++++.|||+|++|.+|++|
T Consensus 612 IRCIKPN~~k~p~~fd~~~V~~----------------------------QLr~~GvLE~vri~r~Gyp~R~~f~~F~~r 663 (717)
T cd01382 612 IRCIKPNLKMVSHQFEGAQILS----------------------------QLQCSGMVSVLDLMQGGFPSRASFHELYNM 663 (717)
T ss_pred eeeeCCCcccCCCCCChHHHHH----------------------------HHHhcchHHHHHHHHccCchhhhHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999
Q ss_pred HHhhhcCccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHH
Q psy10328 325 YRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKL 380 (560)
Q Consensus 325 y~~L~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~ 380 (560)
|+.|++.. ....+++..|+.+|+.+..++.+|++|+||||||.++++.||++
T Consensus 664 y~~l~~~~----~~~~~~~~~~~~iL~~~~~~~~~~~~GkTKVFlr~g~~~~le~~ 715 (717)
T cd01382 664 YKKYMPPK----LVRLDPRLFCKALFKALGLNENDYKFGLTKVFFRPGKFAEFDQI 715 (717)
T ss_pred HHHhCCcc----cCCCCHHHHHHHHHHHcCCCcccEEecceeEEecccHHHHHHHH
Confidence 99999864 22357899999999999999999999999999999999999976
No 13
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=100.00 E-value=1.7e-80 Score=686.17 Aligned_cols=325 Identities=37% Similarity=0.591 Sum_probs=283.7
Q ss_pred ccccccCCC--CCCCceeEEeeccCccccCC-CcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHh
Q psy10328 17 SNQGAAFQT--TPPSRFIGVLDIYGFETFDS-NNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQP 93 (560)
Q Consensus 17 ~~~~~~~~~--~~~~~~IgiLDi~GFE~~~~-NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~ 93 (560)
+|+.++... .....+||||||||||+|+. |||||||||||||+||++|++++|+.||++|.+|||+|+.|+|.||++
T Consensus 361 IN~~l~~~~~~~~~~~~IgiLDI~GFE~f~~~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~f~dN~~ 440 (692)
T cd01385 361 INHALLNKDDVAVSGLSIGVLDIFGFEDFGRCNSFEQLCINYANEQLQYYFNQHIFKLEQEEYQGEGITWTNIEYTDNVG 440 (692)
T ss_pred HHHHhcccccccccceEEEEEecCccccCCCCCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHH
Confidence 455544322 12457899999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCCCCCcEEEeecceEEEeccccccccccch
Q psy10328 94 CIDLIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTV 172 (560)
Q Consensus 94 ~l~li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l 172 (560)
|||||++ |.|||++|||||++|++||++|++++...| +++ ++|.+|+....+|+|+||||+|+|+++||++||+|.+
T Consensus 441 ~ldLie~k~~Gil~lLdee~~~p~~td~~~l~kl~~~~-~~~-~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l 518 (692)
T cd01385 441 CIQLFSKKPTGLLYLLDEESNFPHATSQTLLAKFNQQH-KDN-KYYEGPQVKEPAFIIQHYAGKVKYQIKDFREKNMDLM 518 (692)
T ss_pred HHHHHhcCCccHHHHhHHHhcCCCCCHHHHHHHHHHHh-CCC-CCccCCCCCCCeEEEEEecceeeecCCCHHHhccccc
Confidence 9999996 589999999999999999999999999888 778 8999988778899999999999999999999999999
Q ss_pred hHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCC
Q psy10328 173 YEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPND 252 (560)
Q Consensus 173 ~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~ 252 (560)
+++++++|++|+++++...+........+. ....+........||+++|+.||++||++|++|+||||||||||+
T Consensus 519 ~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~-----~~~~~~~~~~~~~tV~~~f~~~L~~L~~~L~~t~~hfIRCIKPN~ 593 (692)
T cd01385 519 RQDIVALLKGSDSSYVRELIGMDPVAVFRW-----AVLRAAFRAMAAPSVSAQFQTSLNKLMETLGKAEPFFIRCIKSNA 593 (692)
T ss_pred cHHHHHHHHhCccHHHHHHhccCccccccc-----ccccccccCccCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCC
Confidence 999999999999999665542210000000 000011122235799999999999999999999999999999999
Q ss_pred ccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCc
Q psy10328 253 TKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNL 332 (560)
Q Consensus 253 ~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~ 332 (560)
.+.|+.||...|++ ||+|+||+|++|+++.|||+|++|.+|+.||+.|+|..
T Consensus 594 ~k~p~~Fd~~~V~~----------------------------QLr~~GvlE~irirr~Gyp~R~~~~~F~~rY~~L~~~~ 645 (692)
T cd01385 594 EKIENCFDDELVLR----------------------------QLRYTGMLETVRIRRAGYSVRYTYQDFTQQYRILLPKG 645 (692)
T ss_pred ccCcCccCHHHHHH----------------------------HHHhhchHHHHHHHhccCCccccHHHHHHHHHHhCccc
Confidence 99999999999999 99999999999999999999999999999999999865
Q ss_pred cccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHH
Q psy10328 333 KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRA 382 (560)
Q Consensus 333 ~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~ 382 (560)
. .+.++.|+.+|+.+.+++.+|++|+||||||.+.+..||....
T Consensus 646 ~------~~~~~~~~~il~~~~~~~~~~~iGkTkVFlr~~~~~~Le~~~~ 689 (692)
T cd01385 646 A------QSCREDISTLLSKMKIDKRNYQIGKTKIFMRETEKQALDETLH 689 (692)
T ss_pred c------cchHHHHHHHHHhcCCCcccEEeeCceEEEcccHHHHHHHHHh
Confidence 1 3456779999999999999999999999999999999997643
No 14
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=100.00 E-value=2e-79 Score=679.89 Aligned_cols=320 Identities=56% Similarity=0.892 Sum_probs=288.7
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+.+.... ....+||||||||||+|+.|||||||||||||+||++|++++|+.||++|++|||+|+.|+|.||++||
T Consensus 356 ~iN~~l~~~~-~~~~~IgiLDifGFE~f~~NsfEQLcINyaNEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dN~~~l 434 (677)
T smart00242 356 RINKSLSFKD-GSTYFIGVLDIYGFEIFEVNSFEQLCINYANEKLQQFFNQHVFKLEQEEYEREGIDWTFIDFFDNQDCI 434 (677)
T ss_pred HHHHHhcCCC-CCceEEEEEecccccccccCCHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHH
Confidence 3566555432 466799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhh-cccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccC-CCCCCcEEEeecceEEEeccccccccccchh
Q psy10328 96 DLIESK-LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPR-FGAGSFLVKHFADDVTYDTAGFLEKNRDTVY 173 (560)
Q Consensus 96 ~li~~~-~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~-~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~ 173 (560)
|||+++ .|||++|||||++|++||++|+++|...+ +++ +.|.+|+ ..+..|+|+||||+|+|+++||++||+|.++
T Consensus 435 ~li~~~~~Gil~lLdee~~~~~~td~~~~~kl~~~~-~~~-~~~~~~~~~~~~~F~I~H~AG~V~Y~~~gfleKN~D~l~ 512 (677)
T smart00242 435 DLIEKKPPGILSLLDEECRFPKATDQTFLEKLNQTH-EKH-PHFSKPRKKGRTEFIIKHYAGDVTYDVTGFLEKNKDTLF 512 (677)
T ss_pred HHHHcCCccHHHHHHHHhcCCCCCHHHHHHHHHHHh-cCC-CCccCCCCCCCCeEEEEecceeEeecCccHHHHccchhh
Confidence 999965 89999999999999999999999999988 888 8999884 5677999999999999999999999999999
Q ss_pred HHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCCc
Q psy10328 174 EEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDT 253 (560)
Q Consensus 174 ~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~~ 253 (560)
++++++|+.|++++....+.... +...++.+.+||+++|+.||+.||++|++|+||||||||||+.
T Consensus 513 ~~~~~ll~~S~n~~i~~lf~~~~--------------~~~~~~~~~~tv~~~fk~~L~~L~~~l~~t~~hfIRCIKPN~~ 578 (677)
T smart00242 513 KDLIELLQSSKNPLIASLFPSGE--------------SNAGSKKRFRTVGSQFKESLNKLMDTLNSTNPHFIRCIKPNEE 578 (677)
T ss_pred HHHHHHHHhCCcHHHHHHhcccc--------------ccccccCCCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCcc
Confidence 99999999999999776653210 0012345678999999999999999999999999999999999
Q ss_pred cCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCcc
Q psy10328 254 KRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLK 333 (560)
Q Consensus 254 ~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~ 333 (560)
+.|+.||...|.+ ||+|+||||++++++.|||+|++|.+|+.||+.|++...
T Consensus 579 k~~~~Fd~~~V~~----------------------------QLr~~Gvle~iri~r~Gyp~r~~~~~F~~ry~~L~~~~~ 630 (677)
T smart00242 579 KKPGDFDSSLVLH----------------------------QLRYLGVLETIRIRRAGFPYRLPFDEFLQRYRVLLPDTW 630 (677)
T ss_pred cCcccccHHHHHH----------------------------HHHhcccHHHHHHHHccccceecHHHHHHHHHHhCcccc
Confidence 9999999999999 999999999999999999999999999999999999652
Q ss_pred ccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHH
Q psy10328 334 QYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRA 382 (560)
Q Consensus 334 ~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~ 382 (560)
.....++++.|+.+|+.+.+++.+|++|+|||||+.+++..||+.|+
T Consensus 631 --~~~~~~~k~~~~~iL~~~~~~~~~~~iGkTkVFlk~~~~~~Le~~R~ 677 (677)
T smart00242 631 --PPWGGDAKEACEALLQSLGLDEDEYQLGKTKVFLRPGQLAELEELRE 677 (677)
T ss_pred --cccCCCHHHHHHHHHHhcCCCcccEEecCceEeECccHHHHHHhhcC
Confidence 11225689999999999998999999999999999999999998763
No 15
>KOG0161|consensus
Probab=100.00 E-value=1.5e-77 Score=697.26 Aligned_cols=372 Identities=43% Similarity=0.699 Sum_probs=326.7
Q ss_pred ccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccc-cCCHhHH
Q psy10328 17 SNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-YDNQPCI 95 (560)
Q Consensus 17 ~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~-~dn~~~l 95 (560)
+|+.+-.. .+..+|||||||+|||+|+.||||||||||+||+||++||+|||..||++|.+|||.|.+||| .|-++||
T Consensus 436 iN~sld~~-~~~~~fIgvLDiaGFEIfe~nSFEQLciNytnEkLQqfFnh~mFvlEqeeY~~EgIew~fidfG~Dlq~~i 514 (1930)
T KOG0161|consen 436 INKSLDSK-QQRDYFIGVLDIAGFEIFEFNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWDFIDFGLDLQPTI 514 (1930)
T ss_pred HHHHhhhc-cccCCcceeeeeccccccCcCCHHHHHHHHHHHHHHhhhcchhhhhhHHHHHHhCCceeeeccccchhhhH
Confidence 55555544 577789999999999999999999999999999999999999999999999999999999999 5889999
Q ss_pred HHHhhhcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccC--CCCCCcEEEeecceEEEeccccccccccchh
Q psy10328 96 DLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPR--FGAGSFLVKHFADDVTYDTAGFLEKNRDTVY 173 (560)
Q Consensus 96 ~li~~~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~--~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~ 173 (560)
|||++|.||+++|||||.+|++||.+|+++|...|.++| +.|.+|+ ....+|.|.||||+|.|+++||++||+|+++
T Consensus 515 dLIEkp~Gi~slLdEEc~~PkAtd~tf~~kL~~~~~gk~-~~f~~~k~~~~~~~F~l~HyaG~V~Y~~~~WL~Knkdpln 593 (1930)
T KOG0161|consen 515 DLIEKPMGILSLLDEECVVPKATDKTFLEKLCDQHLGKH-PKFQKPKGKKAEAHFALVHYAGTVDYNVDGWLEKNKDPLN 593 (1930)
T ss_pred HHHhchhhHHHHHHHHHhcCCCccchHHHHHHHHhhccC-ccccCcccccchhhhheeeecceeccCccchhhcCCCCch
Confidence 999999999999999999999999999999999998888 9999997 4577999999999999999999999999999
Q ss_pred HHHHHHHHhcCcccccccchh--hhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCC
Q psy10328 174 EEQIALLHSSTNTSQQSSTKS--GAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPN 251 (560)
Q Consensus 174 ~~~~~ll~~S~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN 251 (560)
+.++.+|+.|+++++...+.. +..+...... + ...+.++.+.||+..++.+|+.||.+|++|+|||||||.||
T Consensus 594 ~~v~~ll~~s~~~~v~~l~~~~~~~~~~~~~~~--~---~~~~K~g~F~Tvs~~~keql~~Lm~~l~~T~phFvRCiIPn 668 (1930)
T KOG0161|consen 594 DNVVSLLKQSTNKLVSSLFQDYAGAAAAAKGGE--A---LKKTKKGSFRTVSQLYKEQLNKLMTTLRSTHPHFVRCIIPN 668 (1930)
T ss_pred HHHHHHHHhcccHHHHHHhhhhhccchhhhhhh--h---hcccCCcchhhHHHHHHHHHHHHHHHhccCCCceeEEeccC
Confidence 999999999999986555422 1000000000 0 02345667889999999999999999999999999999999
Q ss_pred CccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcC
Q psy10328 252 DTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGN 331 (560)
Q Consensus 252 ~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~ 331 (560)
+.+.|+.+|..+|+. ||+|.||||.||+++.|||+|++|.+|..||. |++.
T Consensus 669 ~~K~~g~ld~~lvl~----------------------------QLrcngVLEgIRicR~GfPnr~~~~eFrqRy~-lla~ 719 (1930)
T KOG0161|consen 669 EEKKPGKLDAPLVLN----------------------------QLRCNGVLEGIRICRQGFPNRMPFQEFRQRYE-LLAA 719 (1930)
T ss_pred ccccccccCHHHHHH----------------------------HhhccCcHHHHHHHHhhCccccchHHHHHhHH-hhhh
Confidence 999999999999999 99999999999999999999999999999999 5444
Q ss_pred ccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHHHHHHHHHHH--
Q psy10328 332 LKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSIL-- 409 (560)
Q Consensus 332 ~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~~~~~~~-- 409 (560)
... .....|.+..|..++..+..+..-|++|.|||||+.++++.||..|...+...++.+|+.+|||+.|+.|.+..
T Consensus 720 ~~~-~~~~~d~k~~~~~~~~~l~~d~~lyriG~tKvFfkaGvla~LEe~Rd~~ls~ii~~fQA~~Rg~l~r~~~~kr~~~ 798 (1930)
T KOG0161|consen 720 DEP-KKGFSDGKKACEKILEELLLDKNLYRIGHTKVFFKAGVLAHLEEMRDEKLSQIITLFQAAIRGYLARKEFKKRLQQ 798 (1930)
T ss_pred hhc-cccccccchhHHHHHHHHhcccceEeecceeeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 311 22235679999999999999999999999999999999999999999999999999999999999999887653
Q ss_pred -HHHHHhhccchhhHHH
Q psy10328 410 -KSVATLQRWTRGYLAR 425 (560)
Q Consensus 410 -~~~~~iQ~~~R~~~~r 425 (560)
.++.+||+.+|.|+..
T Consensus 799 ~~ai~~iQ~N~r~~~~l 815 (1930)
T KOG0161|consen 799 LDAIKVIQRNIRAYLKL 815 (1930)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 5677777777766544
No 16
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=100.00 E-value=2e-78 Score=664.70 Aligned_cols=282 Identities=41% Similarity=0.697 Sum_probs=262.3
Q ss_pred CCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHHHHHh-hhccccc
Q psy10328 28 PSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCIDLIE-SKLGILD 106 (560)
Q Consensus 28 ~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l~li~-~~~Gll~ 106 (560)
...+||||||||||+|+.|||||||||||||+||++|++++|+.||++|++|||+|..|+|.||++|||||+ +|.|||+
T Consensus 371 ~~~~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~vf~~Eq~eY~~EgI~~~~i~~~dN~~~ldli~~kp~Gil~ 450 (653)
T cd01379 371 DQLNVGILDIFGFENFKKNSFEQLCINIANEQIQYYFNQHIFAWEQQEYLNEGVDARLVEYEDNRPLLDMFLQKPLGLLA 450 (653)
T ss_pred ccceEEEEeccccccCCCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHhHccCCCcHHH
Confidence 346899999999999999999999999999999999999999999999999999999999999999999997 5699999
Q ss_pred chhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCCCCCcEEEeecceEEEeccccccccccchhHHHHHHHHhcCcc
Q psy10328 107 LLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHSSTNT 186 (560)
Q Consensus 107 lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~~~~~~ll~~S~~~ 186 (560)
+|||||++|++||++|++|+...+ + + +.|.+|+..+..|+|+||||+|+|+++||++||+|.++++++++|++|
T Consensus 451 lLdee~~~~~~td~~~~~kl~~~~-~-~-~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S--- 524 (653)
T cd01379 451 LLDEESRFPQATDQTLVEKFEDNL-K-S-KFFWRPKRVELSFGIHHYAGKVLYNASGFLEKNRDFLPADIVLLLRSS--- 524 (653)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHhc-C-C-CCccCCCCCCCceEEEEeceeEeecCCCHHHhccccccHHHHHHHHhC---
Confidence 999999999999999999999876 3 4 578888877889999999999999999999999999999999999877
Q ss_pred cccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCCccCccccchhhhhh
Q psy10328 187 SQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHRTMQ 266 (560)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~~~~p~~fd~~~v~~ 266 (560)
+||+++|+.||++||++|.+|+||||||||||+.+.|+.||...|++
T Consensus 525 ---------------------------------~tv~~~fr~~l~~L~~~l~~t~~hfIRCIKPN~~k~~~~fd~~~V~~ 571 (653)
T cd01379 525 ---------------------------------QTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNEDRQAKKFDAEKVLK 571 (653)
T ss_pred ---------------------------------cHHHHHHHHHHHHHHHHHhccCCceEEeeCCCcccCccccCHHHHHH
Confidence 36789999999999999999999999999999999999999999999
Q ss_pred hhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCccccccccCchHHHH
Q psy10328 267 QLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLKQYNTAVHSMNEIG 346 (560)
Q Consensus 267 q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~~~~~~~~~~k~~~ 346 (560)
||+|+||||++++++.|||+|++|.+|+.||+.|++.. .....+.++.|
T Consensus 572 ----------------------------QLr~~GvlE~iri~r~Gyp~r~~~~~F~~rY~~l~~~~---~~~~~~~~~~~ 620 (653)
T cd01379 572 ----------------------------QLRYTGILETARIRRQGFSHRILFANFIRRYCFLAYRF---EEEPVSSPESC 620 (653)
T ss_pred ----------------------------HHHHcchHHHHHHHHcCCCccccHHHHHHHHHHhcccc---ccccCChHHHH
Confidence 99999999999999999999999999999999998765 22235789999
Q ss_pred HHHhhhcccCcccccccccceeeehhhHHHHHHHH
Q psy10328 347 EHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381 (560)
Q Consensus 347 ~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r 381 (560)
..+|..+.. ++|++|+||||||.+.++.||.+|
T Consensus 621 ~~il~~~~~--~~~~~GktkvFlk~~~~~~le~~~ 653 (653)
T cd01379 621 ALILEKAKL--DNWALGKTKVFLKYYHVEQLNLMR 653 (653)
T ss_pred HHHHHhCCC--CCEEecceEEEEecCHHHHHHhcC
Confidence 999998765 579999999999999999999764
No 17
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=100.00 E-value=5.6e-78 Score=670.26 Aligned_cols=329 Identities=49% Similarity=0.757 Sum_probs=283.9
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+..... .....+||||||||||+|+.|||||||||||||+||++|++++|+.||++|++|||+|+.++|.||++||
T Consensus 349 ~iN~~l~~~-~~~~~~IgiLDi~GFE~f~~NsfEQLcINy~NEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dn~~~l 427 (679)
T cd00124 349 RINSSLKPK-DGRSLFIGILDIFGFEIFEKNSFEQLCINYANEKLQQFFNQHVFKLEQEEYQEEGIDWESIDFTDNQEVI 427 (679)
T ss_pred HHHHHhcCC-CCCCceeeEEeccccccCCCCCHHHHhcccchHHHHHHHHHHHHHHHHHHHHhcCCCccCCcCCCCHHHH
Confidence 356665543 3456799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCc-cccCCCCCCcEEEeecceEEEeccccccccccchh
Q psy10328 96 DLIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHF-VKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTVY 173 (560)
Q Consensus 96 ~li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~-~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~ 173 (560)
|||++ |.|||++|||||.+|++||++|+++|...| +++ +.| ..++..+..|+|+||||+|+|+++||++||+|.++
T Consensus 428 dli~~~~~Gi~~lLdee~~~~~~~d~~~~~kl~~~~-~~~-~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~ 505 (679)
T cd00124 428 DLIEKKPGGLLSLLDEECLFPKGTDETFLEKLNNKL-KSN-NAFYPAKKNAPTEFTIKHYAGDVTYDARGFLEKNKDVLS 505 (679)
T ss_pred HHHhcCCCcHHHHHHHHhCCCCCCHHHHHHHHHHHh-cCC-cccccCCCCCCCceEEEeeceeEEecCCCHHHhcCCccc
Confidence 99997 689999999999999999999999999988 777 554 44455678999999999999999999999999999
Q ss_pred HHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCCc
Q psy10328 174 EEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDT 253 (560)
Q Consensus 174 ~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~~ 253 (560)
++++++|+.|++++....+........ ..++...+....+.+..||+++|+.||+.||++|++|+||||||||||+.
T Consensus 506 ~~~~~ll~~S~~~~i~~lf~~~~~~~~---~~~~~~~~~~~~~~~~~tv~~~f~~qL~~L~~~L~~t~~hfIRCIKPN~~ 582 (679)
T cd00124 506 PELVSLLKSSSNPFIRELFESELSKTG---NSSTGSTSSKGKKKKGQTVGSQFRTSLDALMATLNSTEPHFIRCIKPNEE 582 (679)
T ss_pred HHHHHHHHhCCcHHHHHHhcccccccc---ccccccccccccccCCCcHHHHHHHHHHHHHHHHhcCCCeEEEEECCCcc
Confidence 999999999999996655532100000 00111112233455789999999999999999999999999999999999
Q ss_pred cCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCcc
Q psy10328 254 KRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLK 333 (560)
Q Consensus 254 ~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~ 333 (560)
+.|+.||...|.+ ||+|+||||++|+++.|||+|++|.+|+.||+.|++...
T Consensus 583 k~p~~fd~~~V~~----------------------------QLr~~GvlE~irirr~Gyp~R~~~~eF~~rY~~L~~~~~ 634 (679)
T cd00124 583 KKPNAFDSGKVLQ----------------------------QLRYLGILETIRIRRLGFSVRIPFDEFLSRYRFLAPDLL 634 (679)
T ss_pred cCCCccChHHHHH----------------------------HHHHhchHHHHHHHHccCCceeeHHHHHHHHHHhCcccc
Confidence 9999999999999 999999999999999999999999999999999998652
Q ss_pred ccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHH
Q psy10328 334 QYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381 (560)
Q Consensus 334 ~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r 381 (560)
. .. ......|+.++..+.+++.+|++|+||||||.+++..||..|
T Consensus 635 ~--~~-~~~~~~~~~il~~~~~~~~~~~vGkTkVFlr~~~~~~LE~~r 679 (679)
T cd00124 635 E--KV-SLTKKQVECLLELLGLPKDEWQVGKTKVFLKEGQLSELEKMR 679 (679)
T ss_pred c--cc-CCcHHHHHHHHHhcCCCccCEEecCCeEEECcCHHHHHhccC
Confidence 1 11 223334999999999999999999999999999999998753
No 18
>KOG0162|consensus
Probab=100.00 E-value=1e-77 Score=621.59 Aligned_cols=350 Identities=36% Similarity=0.627 Sum_probs=318.3
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|...-..++....+||||||||||+|+.||||||||||+||+|||.|++-+++.|||+|.+|||.|++|+|+||.-+|
T Consensus 369 rvNkam~~~~~~~~~sIGiLDIYGFEIFe~N~FEQ~CINfVNEKLQQIFIeLTLKaEQEeYvrE~I~WTpIkYFnNKvVC 448 (1106)
T KOG0162|consen 369 RVNKAMQAFKGSEEYSIGILDIYGFEIFENNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVREGIKWTPIKYFNNKVVC 448 (1106)
T ss_pred HHHHHHhcCCCccccceeeEEeeeeeecccCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccccchhhcCCeeee
Confidence 45665554444456789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh--hcccccchhhhhcCC----CCCcHHHHHHHHHHhcCCCCCCccccCCCCCCcEEEeecceEEEeccccccccc
Q psy10328 96 DLIES--KLGILDLLDEECKMP----KGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNR 169 (560)
Q Consensus 96 ~li~~--~~Gll~lLdee~~~~----~~td~~fl~~l~~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~ 169 (560)
||||. |.||+++|||.|... .+.|.+|+.+|...+ ++| |+|.. ....|+|+||||+|+||++||.++|+
T Consensus 449 DLIE~K~PPGims~ldD~~At~Ha~~~~aDqa~~qrLn~~~-~s~-phF~~---~s~~FvIkHYAGdVtYdi~G~~drNr 523 (1106)
T KOG0162|consen 449 DLIENKRPPGIMSALDDVCATAHADSEGADQALLQRLNKLF-GSH-PHFES---RSNGFVIKHYAGDVTYDIDGFCDRNR 523 (1106)
T ss_pred ehhhccCCchHHHHHHHHHHHhccccchhHHHHHHHHHHHh-cCC-Ccccc---ccCceEEEEeccceeeecccccccch
Confidence 99995 589999999999764 367999999999777 999 99974 45689999999999999999999999
Q ss_pred cchhHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecC
Q psy10328 170 DTVYEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIK 249 (560)
Q Consensus 170 d~l~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIk 249 (560)
|.|..|++.||++|+++|....++... ...++++++|.+++.+.|-++|+++|.+|.||||||||
T Consensus 524 D~L~~DlieLm~ts~~~Fl~slFPe~v---------------~~dskrRP~Tag~kIkkqANdLVeTLmKc~P~YIR~IK 588 (1106)
T KOG0162|consen 524 DVLFKDLIELMQTSENPFLKSLFPENV---------------DADSKRRPPTAGDKIKKQANDLVETLMKCQPHYIRCIK 588 (1106)
T ss_pred hHHHHHHHHHHhccchHHHHHhCchhh---------------cccccCCCCCchhhHHhhHHHHHHHHHhcCcceeEeeC
Confidence 999999999999999999766663321 02356778999999999999999999999999999999
Q ss_pred CCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhh
Q psy10328 250 PNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLC 329 (560)
Q Consensus 250 PN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~ 329 (560)
||..+.|+.||...|.+ |+.|+|+-|.+|++++||.+|..|..|..||..|.
T Consensus 589 PNeTK~pnD~ee~~V~H----------------------------QveYLGLqENiRvRRAGfAYRr~F~kF~qRyails 640 (1106)
T KOG0162|consen 589 PNETKSPNDWEESRVKH----------------------------QVEYLGLQENIRVRRAGFAYRRAFDKFAQRYAILS 640 (1106)
T ss_pred CCCCCCCccHHHHHHHH----------------------------HHHhcchhhheeehhhhhHHHHHHHHHHHHheecC
Confidence 99999999999999999 99999999999999999999999999999999999
Q ss_pred cCccccccccCchHHHHHHHhhhcccCcccccccccceeeehh-hHHHHHHHHHhhhhhhhHhHHHHHHHHHHHHHHHHH
Q psy10328 330 GNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSG-QVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSI 408 (560)
Q Consensus 330 ~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~-~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~~~~~~ 408 (560)
|.. |..+.+|.+++|+.||+...+++++|++|.|+||++.. .+..||.+|+......|.+||++||.|++|++|.++
T Consensus 641 p~t--~~twqGD~~~av~~il~~~~m~~~qyQmG~tkVFiKnPEsLF~LEemRer~~d~~A~~IQkAWRrfv~rrky~k~ 718 (1106)
T KOG0162|consen 641 PQT--WPTWQGDEKQAVEHILRDVNMPSDQYQMGVTKVFIKNPESLFLLEEMRERKWDGMARRIQKAWRRFVARRKYEKM 718 (1106)
T ss_pred ccc--ccccccchHHHHHHHHHhcCCChhHhhccceeEEecChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 987 44556999999999999999999999999999999997 689999999999999999999999999999999999
Q ss_pred HHHHHHh
Q psy10328 409 LKSVATL 415 (560)
Q Consensus 409 ~~~~~~i 415 (560)
+..+..|
T Consensus 719 ree~t~l 725 (1106)
T KOG0162|consen 719 REEATKL 725 (1106)
T ss_pred HHHHHHH
Confidence 9766554
No 19
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=100.00 E-value=5.9e-77 Score=661.39 Aligned_cols=335 Identities=26% Similarity=0.389 Sum_probs=274.2
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCC------CcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccc-
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDS------NNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF- 88 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~------NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~- 88 (560)
.+|+.+..+. ....+||||||||||+|+. |||||||||||||+||++|++++|+.||++|++|||+|+.+++
T Consensus 360 ~IN~~l~~~~-~~~~~IgiLDIfGFE~f~~n~~~~~NsfEQLcINyaNEkLQq~f~~~vF~~Eq~eY~~EGI~~~~~~~~ 438 (767)
T cd01386 360 LINRSISSSH-HSIASIMLVDTPGFQNPASQGKDRAATFEELCHNYLQERLQLLFHHRTFVQPLERYAEEGVEVEFDLAE 438 (767)
T ss_pred HHHHHhCCCC-CCCcEEEEEecccccccccccccCCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCccccccC
Confidence 3566555442 3356899999999999974 8999999999999999999999999999999999999986554
Q ss_pred cCCHhHHHHHhhh---------------cccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccC------CCCCC
Q psy10328 89 YDNQPCIDLIESK---------------LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPR------FGAGS 147 (560)
Q Consensus 89 ~dn~~~l~li~~~---------------~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~------~~~~~ 147 (560)
.||.+|||||+++ .|||++|||||++|++||++|++||+..| ++| ++|.++. ..+..
T Consensus 439 ~dn~~~i~lid~~p~~~~~~~~~~~~~~~GIl~lLDEec~~p~~tD~~f~~kl~~~~-~~~-~~~~~~~~~~~~~~~~~~ 516 (767)
T cd01386 439 PSPGTTVALVDQAPQQVVVPAGLRAEDARGLLWLLDEEALVPGSSDDTFLERLFAAY-GDR-ETRETGLSRLRTCEGPLQ 516 (767)
T ss_pred CCchhhHHHhhcccccccccchhhccCCCchhhhhhHhhcCCCCcHHHHHHHHHHHh-ccC-CCcccCccccccCCCCCc
Confidence 6999999999963 49999999999999999999999999988 777 7776522 23468
Q ss_pred cEEEeecc--eEEEeccccccccccch-hHHHHHHHHhcCcccccccchhhh-------hh------hHHHhhccccC--
Q psy10328 148 FLVKHFAD--DVTYDTAGFLEKNRDTV-YEEQIALLHSSTNTSQQSSTKSGA-------KR------MAALAASKTAT-- 209 (560)
Q Consensus 148 F~I~H~aG--~V~Y~v~gfl~kN~d~l-~~~~~~ll~~S~~~~~~~~~~~~~-------~~------~~~~~~~~~~~-- 209 (560)
|+|+|||| +|+|+++||++||+|.+ +.++++||++|++++....+.... .+ .+....+....
T Consensus 517 F~I~HyAG~~~V~Y~~~gfleKNkD~~~~~~~~~ll~~S~~~~i~~lF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (767)
T cd01386 517 FVLFHLLGTNPVLYDVTGWLRRAKPNPAALNAPQLLQDSKREEINSLFQGRAGLAPVCLGAGAGLEGTSQQALRRSSSIR 596 (767)
T ss_pred EEEEEcCCCCceEecCCCHHHhcCCCCChHHHHHHHHhCCcHHHHHHHhccccccccccccccccccccccccccccccc
Confidence 99999999 59999999999999975 689999999999998655442110 00 00000000000
Q ss_pred CC--CCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCCccC----------------------ccccchhhhh
Q psy10328 210 LP--SSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPNDTKR----------------------AFEFNAHRTM 265 (560)
Q Consensus 210 ~~--~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~~~~----------------------p~~fd~~~v~ 265 (560)
.+ +.....+++||+++|+.||++||++|++|+||||||||||+.+. |+.||...|+
T Consensus 597 ~~~~~~~~~~k~~tv~~qFk~qL~~Lm~~L~~t~phfIRCIKPN~~k~~~~~~~~~~~~~~~~~~~~~~~p~~fd~~~V~ 676 (767)
T cd01386 597 RTFTSSTAAVKRKSPCVQVKLQVDALIDTLRRSGLHFVHCYLPQHNGGKAMARTASPSPQQSEDNGVAAEPLALDIPLLR 676 (767)
T ss_pred ccccccccccccccHHHHHHHHHHHHHHHHhccCCeeEEEeCccccccccccccccccccccccccccccccccCHHHHH
Confidence 00 00122346799999999999999999999999999999999974 6788888888
Q ss_pred hhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCccc-c--ccccCch
Q psy10328 266 QQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLKQ-Y--NTAVHSM 342 (560)
Q Consensus 266 ~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~~-~--~~~~~~~ 342 (560)
+ ||+|+||||++|++++|||+|++|.+|+.||+.|.+...+ + .....|.
T Consensus 677 ~----------------------------QLr~~GvlE~iri~r~Gfp~R~~~~~F~~RY~~L~~~~~~~~~~~~~~~d~ 728 (767)
T cd01386 677 S----------------------------QLRGSQILEAARLHRLGFPISVPLGEFVRRFGLLAEGLTKKVGGAGGGADE 728 (767)
T ss_pred H----------------------------HHHhcccHHHHHHHhcCCcccccHHHHHHHHHhhChhhcccccccccCCCH
Confidence 8 9999999999999999999999999999999999875411 1 1123688
Q ss_pred HHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHH
Q psy10328 343 NEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLR 381 (560)
Q Consensus 343 k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r 381 (560)
++.|+.||+.+.+++++|++|+||||||.+++..||+.|
T Consensus 729 r~~~~~il~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~R 767 (767)
T cd01386 729 RAAVEEILENLELDKSSYRIGHSQVFFRAGVLSRLEAQR 767 (767)
T ss_pred HHHHHHHHHHcCCCcceEEeecceEEecccHHHHHhccC
Confidence 999999999999999999999999999999999999764
No 20
>KOG0163|consensus
Probab=100.00 E-value=2.8e-71 Score=574.56 Aligned_cols=389 Identities=34% Similarity=0.542 Sum_probs=334.9
Q ss_pred ccccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhH
Q psy10328 15 SSSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPC 94 (560)
Q Consensus 15 ~~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~ 94 (560)
+.+||.++|. .+..+||||||.|||-|.+||||||||||+||+||+|||+.+++.||+.|+.||+.++.|.|.||++|
T Consensus 438 ~~iNqsiPFe--~St~fiGVLDiAGFEyf~~NSFEQFCINyCNEKLQ~FFNerILkeEQElYekEGLnv~ei~f~DNqDc 515 (1259)
T KOG0163|consen 438 GRINQSIPFE--KSTFFIGVLDIAGFEYFAVNSFEQFCINYCNEKLQKFFNERILKEEQELYEKEGLNVPEIEFTDNQDC 515 (1259)
T ss_pred HHhhcccccc--cccceeEEEeeccceeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEeccchhH
Confidence 4589999998 56789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh-cccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCC----------CCCCcEEEeecceEEEeccc
Q psy10328 95 IDLIESK-LGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRF----------GAGSFLVKHFADDVTYDTAG 163 (560)
Q Consensus 95 l~li~~~-~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~----------~~~~F~I~H~aG~V~Y~v~g 163 (560)
|+|||.+ .|||.|||||+.+|+.++..|..+.+..+ .+| -....|+. ++..|.|+||||.|.|.+..
T Consensus 516 IeL~E~K~~GifdlLDEEaklP~~s~qhFT~~vHe~~-k~H-fRL~~PRkSklksHR~lRDdEG~liRHfAGaVCYeT~~ 593 (1259)
T KOG0163|consen 516 IELIEAKSNGIFDLLDEEAKLPKPSYQHFTARVHESN-KNH-FRLDLPRKSKLKSHRELRDDEGFLIRHFAGAVCYETEQ 593 (1259)
T ss_pred HHHHHHhccchhhhhhhhccCCCcchHHHHHHHHHhh-hcc-eeecCCchhhhhhhhhhccccceeeeecccceeechHH
Confidence 9999966 89999999999999999999999999877 665 45556653 24689999999999999999
Q ss_pred cccccccchhHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCc
Q psy10328 164 FLEKNRDTVYEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPH 243 (560)
Q Consensus 164 fl~kN~d~l~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~h 243 (560)
|+|||.|.|...+..|+..|++++....+.++. ++ +.....++.+.-+|+++|+.||..||+.|.+|+.|
T Consensus 594 FvEKNnD~LH~SLe~Li~es~~~ll~sLF~S~s---------~t-~a~~~~gkL~~iSVGaKFKtQL~~LldKL~stGt~ 663 (1259)
T KOG0163|consen 594 FVEKNNDALHNSLEGLIEESDNPLLVSLFPSGS---------ST-SAKQTRGKLKFISVGAKFKTQLSELLDKLESTGTH 663 (1259)
T ss_pred HHHhccHHHHHHHHHHHHhccchHHHHHccCCC---------CC-ccccccceeeEEehhHHHHHHHHHHHHHHHhcCCe
Confidence 999999999999999999999999766664320 00 11112345667899999999999999999999999
Q ss_pred eeeecCCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHH
Q psy10328 244 YIRCIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYN 323 (560)
Q Consensus 244 fIrCIkPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ 323 (560)
||||||||..+.|..||...++. ||.|+|++..++++..|||.|..|.+.+.
T Consensus 664 FiRCiKPN~kM~~~~FeGs~iLs----------------------------QLqCsGm~SVL~LMq~GyPSR~~F~dLYa 715 (1259)
T KOG0163|consen 664 FIRCIKPNSKMIDRHFEGSAILS----------------------------QLQCSGMISVLELMQHGYPSRTSFADLYA 715 (1259)
T ss_pred eEEeecCccccccccccHHHHHH----------------------------HhhhccHHHHHHHHhcCCCccccHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999
Q ss_pred HHHhhhcCccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHHHHH
Q psy10328 324 RYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRK 403 (560)
Q Consensus 324 ry~~L~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~ 403 (560)
.|+..+|.. ....|++-+|+.+++.|+.+..+|++|.|||||+.+.+...+++....-...+..| +.+..|+.+.
T Consensus 716 mYkk~lPpk----LarLdpRlFck~lF~aLgL~q~DfkFGlTKVFFr~GKFaEFDqiMksDPe~m~~lv-~kVn~WLv~s 790 (1259)
T KOG0163|consen 716 MYKKVLPPK----LARLDPRLFCKALFQALGLDQNDFKFGLTKVFFRPGKFAEFDQIMKSDPETMLELV-AKVNKWLVRS 790 (1259)
T ss_pred HHHhhCCHh----hhcCChHHHHHHHHHHhCCCcccccccceeEeecCcchHHHHHHHhcCHHHHHHHH-HHHHHHHHHh
Confidence 999998874 45689999999999999999999999999999999999888887665544444444 4567899999
Q ss_pred HHHHHHHHHHHhhccchhhHHHHhhhhhhcchhhhHHhHHHhhHHHHHHHHHHhh
Q psy10328 404 KYLSILKSVATLQRWTRGYLARRLVLHMRRTRAAVRIQSAVRAFIRRRQYLRLRA 458 (560)
Q Consensus 404 ~~~~~~~~~~~iQ~~~R~~~~r~~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~r~ 458 (560)
+|++...++..+-..-- .-+-+..+++.+|++.|||++|+++...-.
T Consensus 791 RWkk~q~~a~sVIKLkN--------kI~yRae~v~k~Q~~~Rg~L~rkr~~~ri~ 837 (1259)
T KOG0163|consen 791 RWKKSQYGALSVIKLKN--------KIIYRAECVLKAQRIARGYLARKRHRPRIA 837 (1259)
T ss_pred HHHHhhhhhhheeehhh--------HHHHHHHHHHHHHHHHHHHHHHhhhchHHH
Confidence 99988766554432211 112234577899999999999998765443
No 21
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=100.00 E-value=3.5e-74 Score=646.90 Aligned_cols=326 Identities=50% Similarity=0.804 Sum_probs=265.3
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccc-cCCHhH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-YDNQPC 94 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~-~dn~~~ 94 (560)
.+|+.++.......++||||||||||+|..|||||||||||||+||++|++++|+.|+++|.+|||+|+.++| .||.+|
T Consensus 350 ~iN~~L~~~~~~~~~~IgILDi~GFE~~~~N~fEQLciNyanErLq~~f~~~~f~~e~~~y~~EgI~~~~i~~~~dn~~~ 429 (689)
T PF00063_consen 350 RINSALSPSESENSSSIGILDIFGFENFSVNSFEQLCINYANERLQQFFNQHIFKSEQEEYKEEGIDWPFIDFNPDNQPC 429 (689)
T ss_dssp HHHHHH--SS-S-SEEEEEEEEE-B---SSB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCS-GCGHHHHH
T ss_pred hhhhccccccccccccCcccCccccccccccccccceeeeccccccceeeeecccccccccccccccccccccccCchhh
Confidence 4677777665567889999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccC----CCCCCcEEEeecceEEEeccccccccc
Q psy10328 95 IDLIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPR----FGAGSFLVKHFADDVTYDTAGFLEKNR 169 (560)
Q Consensus 95 l~li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~----~~~~~F~I~H~aG~V~Y~v~gfl~kN~ 169 (560)
||||++ |.|||++|||||.+|++||++|++++...+.+++ +.|.+|+ ..+..|+|+||||+|+|+|+||++||+
T Consensus 430 ldLi~~~~~Gil~lLdee~~~~~~sd~~fl~kl~~~~~~~~-~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKNr 508 (689)
T PF00063_consen 430 LDLIEKKPKGILSLLDEECLLPRGSDESFLEKLLKRHSGKH-PSFVKPRFSRSTSKSSFTIKHYAGDVTYDVEGFLEKNR 508 (689)
T ss_dssp HHHHHSSTTSHHHHHHHHCTSTTS-HHHHHHHHHHHHTTTS-TTEECTSSSTSSTTSCEEEEETTEEEEEE-TTHHHHHH
T ss_pred hhhhccccCCHHHHhhhhhhcccchhhHHHHHHHhhcccCC-CcccccccccccCCCceEeecccCcceecccccccccc
Confidence 999997 7999999999999999999999999999885666 8888874 467899999999999999999999999
Q ss_pred cchhHHHHHHHHhcCcccccccchhhhhhh----HHHh---hccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCC
Q psy10328 170 DTVYEEQIALLHSSTNTSQQSSTKSGAKRM----AALA---ASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIP 242 (560)
Q Consensus 170 d~l~~~~~~ll~~S~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~ 242 (560)
|.++++++++|++|+++++...+....... .... .......+......+..||+++|+.+|+.||+.|++|+|
T Consensus 509 D~l~~~~~~ll~~S~n~~v~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~qf~~sL~~L~~~L~~t~~ 588 (689)
T PF00063_consen 509 DPLSQDFVSLLRSSTNSFVSSLFSSEATATSSSSSSLSRRSSSSSTQSRSSGSKKKKSTVSSQFRSSLDELMDTLRSTQP 588 (689)
T ss_dssp E-S-HHHHHHHHTSSSHHHHHHTHSHHH---S-S-S-BTTTTCCCTTSSCCCGGTCSSBHHHHHHHHHHHHHHHHCTSEE
T ss_pred chHHHHHHHHHHhCcCcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHhhhhhccc
Confidence 999999999999999999766553321000 0000 000001112234456699999999999999999999999
Q ss_pred ceeeecCCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHH
Q psy10328 243 HYIRCIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFY 322 (560)
Q Consensus 243 hfIrCIkPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~ 322 (560)
|||||||||+.+.|+.||...|.+ ||+++||+|++++++.|||+|++|.+|+
T Consensus 589 hfIrCIkPN~~~~~~~FD~~~V~~----------------------------QLr~~gile~vri~~~Gyp~r~~~~eF~ 640 (689)
T PF00063_consen 589 HFIRCIKPNDQKKPNQFDSKLVLR----------------------------QLRYSGILETVRIRRQGYPVRLTFDEFL 640 (689)
T ss_dssp EEEEEE-SSSS--TT---HHHHHH----------------------------HHHHTTHHHHHHHHHCSSSEEEEHHHHH
T ss_pred ceEEEeccccccccccccchheeh----------------------------hhhhhhhhhhhhhhhcccceecchhhhh
Confidence 999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHhhhcCcccc-ccccCchHHHHHHHhhhcccCcccccccccceeee
Q psy10328 323 NRYRVLCGNLKQY-NTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFR 370 (560)
Q Consensus 323 ~ry~~L~~~~~~~-~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr 370 (560)
+||+.|++..... .....+.++.|+.+|+.+.+++.+|++|+||||||
T Consensus 641 ~RY~~L~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~iG~TkVFLk 689 (689)
T PF00063_consen 641 RRYKCLLPSSSSSSDSSKEDDKEACEALLEQLDLESSDYQIGKTKVFLK 689 (689)
T ss_dssp HHHGGGSTTCSHSS--HCSSHHHHHHHHHHHTTSEGTCEEEESSEEEEC
T ss_pred hhhceechhhcccccccCCCHHHHHHHHHHhCCCCccCEEECCcEEEEC
Confidence 9999999976221 12347899999999999999999999999999996
No 22
>KOG4229|consensus
Probab=100.00 E-value=1.4e-43 Score=396.61 Aligned_cols=435 Identities=28% Similarity=0.368 Sum_probs=324.9
Q ss_pred CceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHHHHHhh-hcccccc
Q psy10328 29 SRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCIDLIES-KLGILDL 107 (560)
Q Consensus 29 ~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l~li~~-~~Gll~l 107 (560)
...||||||||||+|+.|+|||||||||||+||++|++|+|..||+||..|||+|..|.|.||..|+|+|.. |.||+.+
T Consensus 426 ~~~IgiLdiFgfE~f~~nsfEq~~in~Ane~lQ~~fnqhIf~~Eq~ey~~e~I~w~~i~~~dN~~~ldli~~kp~gil~l 505 (1062)
T KOG4229|consen 426 ILSIGILDIFGFENFERNSFEQLCINLANEQLQYYFNQHIFALEQEEYDNESIDWRNIEFADNRRRLDLISPKPMGILSL 505 (1062)
T ss_pred cceeehhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhcCCCeeeeeeeeccchhhhhccCccchhhe
Confidence 478999999999999999999999999999999999999999999999999999999999999999999995 7999999
Q ss_pred hhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCC-CCCCcEEEeecceEEEeccccccccccchhHHHHHHHHhcCcc
Q psy10328 108 LDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRF-GAGSFLVKHFADDVTYDTAGFLEKNRDTVYEEQIALLHSSTNT 186 (560)
Q Consensus 108 Ldee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~-~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~~~~~~ll~~S~~~ 186 (560)
||||+.+|+++|.+++.|+...| +.+ ..+..|+. ....|+|.||||.|.|++.||++||+|.++.|++.++.+|.+.
T Consensus 506 iDees~fP~~td~tl~~k~~~q~-~~~-~~y~~~k~~~e~~f~I~Hyagkv~y~~~~flekNrD~~~~d~~~~~~s~~~~ 583 (1062)
T KOG4229|consen 506 IDEESRFPKATDQTLLLKLNMQH-GSN-NLYVFPKSRVETVFGITHYAGKVQYNIRGFLEKNRDTVRNDLVNLLRSSDES 583 (1062)
T ss_pred ecccCcCCchHHHHHHHHhhhhh-hcc-cccccccccccceeeeeeecceehhhhhhHHHhhhhhhhhhHHhhcccccch
Confidence 99999999999999999999888 665 56665554 4669999999999999999999999999999999999998877
Q ss_pred cccccchh------h-hhhhHHH---------hhccc----cCCCCC-----ccccCCCchhHHHHHHHHHHHHHHhccC
Q psy10328 187 SQQSSTKS------G-AKRMAAL---------AASKT----ATLPSS-----KSKQHKKTVGSQFRESLSLLMRTLNSTI 241 (560)
Q Consensus 187 ~~~~~~~~------~-~~~~~~~---------~~~~~----~~~~~~-----~~~~~~~tv~~~f~~sL~~L~~~L~~t~ 241 (560)
+....... . ....+.. ..... ...+.. .......+++.+++-++.+..+.|.+..
T Consensus 584 ~~~~~~~~~~~~~~~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~s~l~rg~ 663 (1062)
T KOG4229|consen 584 LLRQLVNGDPTAVSRWFELRALKVAMPVPLEVTLRRPVRKTLTADSSRSAPETTNCLPDKVLPEDRPSLFEELSALARGQ 663 (1062)
T ss_pred hhcccCCCCCccCCcchhhhhhcccccccchhhhccccccccccccccchHHHHHhhhccccccCChhhhcchhhcCCCc
Confidence 62221100 0 0000000 00000 000000 0011356777777788999999999999
Q ss_pred CceeeecCCCCccCccccchh-hhhhhhhhcccchhhhcccccc------------------------------------
Q psy10328 242 PHYIRCIKPNDTKRAFEFNAH-RTMQQLRACGVLETIRISAAGQ------------------------------------ 284 (560)
Q Consensus 242 ~hfIrCIkPN~~~~p~~fd~~-~v~~q~r~~G~~e~~ri~~~g~------------------------------------ 284 (560)
+||.+||++|+.-.+..++.. ....++...|..++..+.+.|.
T Consensus 664 ~~~~~~i~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 743 (1062)
T KOG4229|consen 664 DHFMRAISQNPRYALEQGSQERKGPRRLSSRGSTATPSHDRPGRKTNLLYSEVVNGRKNSEYLCSPRPDLAERARVQLLE 743 (1062)
T ss_pred cchhhhhhcCchhhhhhcCcccCchhhhhhcccccCCCCCCccccccccchhhhcccccccccCCCCHHHHHHHHHHHHh
Confidence 999999999999888777765 6666677777777655555440
Q ss_pred --------------------------------------------------------------------------------
Q psy10328 285 -------------------------------------------------------------------------------- 284 (560)
Q Consensus 285 -------------------------------------------------------------------------------- 284 (560)
T Consensus 744 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~e~~t~~~l~~~~kk~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 823 (1062)
T KOG4229|consen 744 KNAINMKSERLTTLLPRYIPDPCLDPVRRERVTQLRLHQHKKKAFPQPLRSPQVRKSKLESYLAIAKELFVRRFLENQKK 823 (1062)
T ss_pred hccccchhhhhcccccccCccccCCccccchhhhHHHHHhhccccCccccccchhhccchhhhhhhhHHHHHHHHHhhhh
Confidence
Q ss_pred --ccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCccccccccCchHHHHHHHhhhcccCcccccc
Q psy10328 285 --FEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKF 362 (560)
Q Consensus 285 --~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~i 362 (560)
..++...+..|+.+.|+++...+...+++..++...+...+.+..+.. ...........+..+.++++.
T Consensus 824 i~~~~~~~~v~~~~~~t~~~~~~~v~~~~~~~~i~~~~~~~~~~i~~~~~---------~~~v~~~~~~~~~~n~~~~~~ 894 (1062)
T KOG4229|consen 824 IGLRFPDNVVLRQVSYTGELDQEQVRRSLYFAEISPQDSVNQSRIGLPET---------VDTVADEEFSTLSCNADTIRL 894 (1062)
T ss_pred hccCCChHHHHHhhhchhhhccchheeccccccccchhccccccccCCcc---------chhhchhheeecccCccchhc
Confidence 012222344577777777777777777777777777777666665532 111222233334446789999
Q ss_pred cccceeeehhhHHHHHHHHHhhhhh-hhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhh-hhhcchhhhHH
Q psy10328 363 GKTKIFFRSGQVAYLEKLRAEKLKR-CCIVIQKNVRCFLVRKKYLSILKSVATLQRWTRGYLARRLVL-HMRRTRAAVRI 440 (560)
Q Consensus 363 GktkVFlr~~~~~~Le~~r~~~l~~-aa~~IQ~~~Rg~l~R~~~~~~~~~~~~iQ~~~R~~~~r~~~~-~~~~~~aa~~I 440 (560)
|..++|+...-...++......... -+...|++++....++.+.++..+.+.+| ++.+..+.... ......++..+
T Consensus 895 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~ 972 (1062)
T KOG4229|consen 895 GVHVVFLLLNERSRTEVALKDEANDELSFFKQKWFRLTLERKGLLRLSEGSVLIQ--RLELLGRRTCPVAGAPAVAAASL 972 (1062)
T ss_pred cceEEeecccchHHHHHHHhHhhHHHHHHHHHHHHHhhhccccchhhcchhHHHH--HHHHhcccCCcchhhhhhhhhhc
Confidence 9999999887766555443333222 25667888888888888999999888888 66666654322 22334577889
Q ss_pred hHHHhhHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q psy10328 441 QSAVRAFIRRRQYLRLRALVLGLQCAARGMLVRREV 476 (560)
Q Consensus 441 Q~~~R~~~~Rr~~~~~r~aai~iQ~~~R~~~~Rr~~ 476 (560)
|..|+.+..+..+...+.+++.+|..+++...+..+
T Consensus 973 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 1008 (1062)
T KOG4229|consen 973 QNAWPVYRELSGRLGLRRSFIADQSPRSRPAYTMIF 1008 (1062)
T ss_pred cccchhhhhhhhhHHHhhhhcchhcccccchhhhhH
Confidence 999999999999999999999999988876655544
No 23
>KOG0160|consensus
Probab=98.82 E-value=5.9e-08 Score=108.33 Aligned_cols=86 Identities=35% Similarity=0.593 Sum_probs=80.1
Q ss_pred chhhhHHhHHHhhHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10328 434 TRAAVRIQSAVRAFIRRRQYLRLRALVLGLQCAARGMLVRREVRRVRENRAALRIQTRVRGFLARRNYEATRAKIVICQA 513 (560)
Q Consensus 434 ~~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~~~R~~~~Rr~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~~~a~i~iQ~ 513 (560)
..+++.||+.+|+|..|+.|..+|.+++.||+.+||+++|+ ... ++.||+.||+.||+++.|+.|...+.+++.+|+
T Consensus 673 ~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~--~~~-~~~aai~~q~~~r~~~~r~~y~~~~~~~~~~qs 749 (862)
T KOG0160|consen 673 SAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARR--ETE-REAAAIGIQKECRSYLNRRRYRALIPASITIQS 749 (862)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH--hhH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999 223 668999999999999999999999999999999
Q ss_pred HHhhHHHHH
Q psy10328 514 SIRRFLAKK 522 (560)
Q Consensus 514 ~~R~~~aR~ 522 (560)
.+|++.+|.
T Consensus 750 ~~r~~~~r~ 758 (862)
T KOG0160|consen 750 GVRAMLARN 758 (862)
T ss_pred HHHHHHhcc
Confidence 999999987
No 24
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=98.28 E-value=1e-05 Score=93.68 Aligned_cols=93 Identities=25% Similarity=0.234 Sum_probs=45.8
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhh-ccchhhHHHHhhhhhhcchhhhHHhHHHhhHHHHHHHHHHhhhhhhHHHH
Q psy10328 388 CCIVIQKNVRCFLVRKKYLSILKSVATLQ-RWTRGYLARRLVLHMRRTRAAVRIQSAVRAFIRRRQYLRLRALVLGLQCA 466 (560)
Q Consensus 388 aa~~IQ~~~Rg~l~R~~~~~~~~~~~~iQ-~~~R~~~~r~~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~~ 466 (560)
++..+|..|+....|+.+......+..+| ..++....+...+......+++.+|+.||.+..++++..+....+.+|+.
T Consensus 795 ~~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i~~~~~ 874 (1463)
T COG5022 795 LFIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSA 874 (1463)
T ss_pred hHHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhHHHHHHHH
Confidence 34444445554444555554445555555 33333333222222233345555555555555555555555555555555
Q ss_pred HHHHHHHHHHHHHH
Q psy10328 467 ARGMLVRREVRRVR 480 (560)
Q Consensus 467 ~R~~~~Rr~~~~~~ 480 (560)
+|.-.+++++..+.
T Consensus 875 ~r~~~a~r~~~e~k 888 (1463)
T COG5022 875 QRVELAERQLQELK 888 (1463)
T ss_pred HHHHHHHHHHHHHH
Confidence 55555555554443
No 25
>KOG0520|consensus
Probab=98.18 E-value=3.3e-06 Score=94.79 Aligned_cols=125 Identities=19% Similarity=0.178 Sum_probs=63.8
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhhhcchhhhHHhHHHhhHHHHHHHHHHhhhhhhHHHHH
Q psy10328 388 CCIVIQKNVRCFLVRKKYLSILKSVATLQRWTRGYLARRLVLHMRRTRAAVRIQSAVRAFIRRRQYLRLRALVLGLQCAA 467 (560)
Q Consensus 388 aa~~IQ~~~Rg~l~R~~~~~~~~~~~~iQ~~~R~~~~r~~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~~~ 467 (560)
++..||..+++|..|+.+..++..++.||+++|++..|+.+..+- ++. ...++.| .++..+|..+
T Consensus 812 aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~--wSv---------~~lek~~----lrwR~k~~g~ 876 (975)
T KOG0520|consen 812 AASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKIT--WSV---------GVLEKLI----LRWRRKGKGF 876 (975)
T ss_pred HHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheec--hhh---------hHHHHHH----HHHHHhhhhh
Confidence 456666666666666666666666666666666666665433221 000 0000000 1223344455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy10328 468 RGMLVRREVRRVRENRAALRIQTRVRGFLAR--RNYEATRAKIVICQASIRRFLAKKRFKKMKK 529 (560)
Q Consensus 468 R~~~~Rr~~~~~~~~~aa~~IQ~~~R~~~~R--r~~~~~~~a~i~iQ~~~R~~~aR~~~~~lk~ 529 (560)
||+..+....+. +.|++.||...+-|..- ..|.++.+|+++||+.+|.+.++.+++++..
T Consensus 877 Rgfk~~~~~e~~--~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQsm~rs~~a~qqyrR~~~ 938 (975)
T KOG0520|consen 877 RGFKGRALFEEQ--ETAATVIEDCYDFYKQLRKQTEERLTRAVVRVQSMFRSPKAQQQYRRLLL 938 (975)
T ss_pred cccccccchhcc--ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 555444433332 13455555555544432 3445556666666666666666666666543
No 26
>KOG0520|consensus
Probab=97.96 E-value=3.7e-05 Score=86.61 Aligned_cols=102 Identities=23% Similarity=0.356 Sum_probs=83.3
Q ss_pred cchhhhHHhHHHhhHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHH
Q psy10328 433 RTRAAVRIQSAVRAFIRRRQYLRLRALVLGLQCAARGMLVRREVRRVR--------ENRAALRIQTRVRGFLARRNYEAT 504 (560)
Q Consensus 433 ~~~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~~~R~~~~Rr~~~~~~--------~~~aa~~IQ~~~R~~~~Rr~~~~~ 504 (560)
...||..||..+|+|+.|+.|...+.-++.||+++||+..|+.|.++- -..++..+|+.+|||..+......
T Consensus 809 ~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~ 888 (975)
T KOG0520|consen 809 DPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQ 888 (975)
T ss_pred chhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhcc
Confidence 346789999999999999999999999999999999999999997552 234678999999999999888777
Q ss_pred HHHHHHHHHHHhhHHHH--HHHHHHHHHHHHH
Q psy10328 505 RAKIVICQASIRRFLAK--KRFKKMKKEARSV 534 (560)
Q Consensus 505 ~~a~i~iQ~~~R~~~aR--~~~~~lk~~~~~~ 534 (560)
-.+++.||...|.+..- ..++++..++-.+
T Consensus 889 ~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~~V 920 (975)
T KOG0520|consen 889 ETAATVIEDCYDFYKQLRKQTEERLTRAVVRV 920 (975)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77889999998888764 3455554444433
No 27
>KOG0164|consensus
Probab=97.82 E-value=0.00019 Score=77.40 Aligned_cols=85 Identities=21% Similarity=0.260 Sum_probs=68.4
Q ss_pred hhhhHHhHHHhhHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------H
Q psy10328 435 RAAVRIQSAVRAFIRRRQYLRLRALVLGLQCAARGMLVRREVRRVRENRAALRIQTRVRGFLARRNYEA----------T 504 (560)
Q Consensus 435 ~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~~~R~~~~Rr~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~----------~ 504 (560)
.-++.||+.||||++|.+|.+++.+++.|+ +||.+. ++ .++-.||+.+||+..++.|.+ +
T Consensus 697 ~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K-------~k--s~v~el~~~~rg~k~~r~ygk~~~WP~pP~~L 766 (1001)
T KOG0164|consen 697 SLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYK-------LK--SYVQELQRRFRGAKQMRDYGKSIRWPAPPLVL 766 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-------HH--HHHHHHHHHHHhhhhccccCCCCCCCCCchHH
Confidence 457899999999999999999999999998 887443 22 567799999999999998854 5
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Q psy10328 505 RAKIVICQASIRRFLAKKRFKKMKK 529 (560)
Q Consensus 505 ~~a~i~iQ~~~R~~~aR~~~~~lk~ 529 (560)
+.....+|..+-.|.+.+-+..+-+
T Consensus 767 r~~~~~L~~lf~rwra~~~~~~ipp 791 (1001)
T KOG0164|consen 767 REFEELLRELFIRWRAWQILKSIPP 791 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 5677788888888887776666533
No 28
>KOG2128|consensus
Probab=97.69 E-value=0.001 Score=77.21 Aligned_cols=145 Identities=28% Similarity=0.460 Sum_probs=96.7
Q ss_pred HHHHhhccchhhHHHHhhhhhhcch---hhhHHhHHHhhHHHHHHHHHHhh-------hhhhHHHHHHHHHH--HHHHHH
Q psy10328 411 SVATLQRWTRGYLARRLVLHMRRTR---AAVRIQSAVRAFIRRRQYLRLRA-------LVLGLQCAARGMLV--RREVRR 478 (560)
Q Consensus 411 ~~~~iQ~~~R~~~~r~~~~~~~~~~---aa~~IQ~~~R~~~~Rr~~~~~r~-------aai~iQ~~~R~~~~--Rr~~~~ 478 (560)
..+..|+.+|+...+.....+.... -..++|+..||+..|..+..... .+..||+.|||++. -+...-
T Consensus 509 ~~is~q~~v~~i~~~~~l~~~~~s~~~s~~~~~qa~~rg~~~r~~~~~~~~fl~~~~P~~~diq~~vr~~~~~~~~~~~~ 588 (1401)
T KOG2128|consen 509 SLISLQALVRGIVLRSALFSLYPSLGKSEKLRIQASERGFSTRNKFRSRLDFLKKQTPFVVDIQALVRGILQYIPRDVYL 588 (1401)
T ss_pred HHhhHHHHhhhhHHHhhHHHHhhhhccccchhhhhhccccchHHHHHhhhhHHHhcCchHHHHHHHHHHHhhhchHHHHH
Confidence 3445777777777665322222111 12456999999998887654332 77889999999885 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHhhHHHHHHHHHHH-----------------------
Q psy10328 479 VRENRAALRIQTRVRGFLARRNYEAT-------RAKIVICQASIRRFLAKKRFKKMK----------------------- 528 (560)
Q Consensus 479 ~~~~~aa~~IQ~~~R~~~~Rr~~~~~-------~~a~i~iQ~~~R~~~aR~~~~~lk----------------------- 528 (560)
.-....++.+|++.||+++|+.+.+. ..+++.||+++|.+..|..+..|.
T Consensus 589 ~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~~s~npsl~~vrkFV~lld~~~~d 668 (1401)
T KOG2128|consen 589 DSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRKDYKLLFTSENPSLETVRKFVHLLDQTDVD 668 (1401)
T ss_pred HHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccchHHHHHhcCCCCchhhHHhhhhhcCCccch
Confidence 11346788999999999999987553 368899999999999998888871
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10328 529 ---------KEARSVEHVKKLNKGLENKIISMQQRIG 556 (560)
Q Consensus 529 ---------~~~~~~~~~~~~~~~~e~~~~~l~~~~~ 556 (560)
.......++. -+..+|+.+.+++.||+
T Consensus 669 f~~e~~le~lr~eIsrk~~-sne~Lekdi~~md~kIg 704 (1401)
T KOG2128|consen 669 FEEELELEKLREEISRKIR-SNEQLEKDINEMDEKIG 704 (1401)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHh
Confidence 1112222233 36778888988888875
No 29
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=97.30 E-value=0.00037 Score=40.87 Aligned_cols=19 Identities=53% Similarity=0.877 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy10328 483 RAALRIQTRVRGFLARRNY 501 (560)
Q Consensus 483 ~aa~~IQ~~~R~~~~Rr~~ 501 (560)
+||+.||++||||++|+.|
T Consensus 2 ~aai~iQ~~~R~~~~Rk~~ 20 (21)
T PF00612_consen 2 KAAIIIQSYWRGYLARKRY 20 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3555555555555555554
No 30
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=97.16 E-value=0.00036 Score=40.93 Aligned_cols=19 Identities=42% Similarity=0.728 Sum_probs=11.2
Q ss_pred hhhhHHhHHHhhHHHHHHH
Q psy10328 435 RAAVRIQSAVRAFIRRRQY 453 (560)
Q Consensus 435 ~aa~~IQ~~~R~~~~Rr~~ 453 (560)
.||+.||+.||||++|+.|
T Consensus 2 ~aai~iQ~~~R~~~~Rk~~ 20 (21)
T PF00612_consen 2 KAAIIIQSYWRGYLARKRY 20 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3556666666666666554
No 31
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=96.26 E-value=0.0032 Score=39.00 Aligned_cols=19 Identities=47% Similarity=0.824 Sum_probs=13.1
Q ss_pred hhhhHHhHHHhhHHHHHHH
Q psy10328 435 RAAVRIQSAVRAFIRRRQY 453 (560)
Q Consensus 435 ~aa~~IQ~~~R~~~~Rr~~ 453 (560)
.+|+.||+.||||++|+.|
T Consensus 4 ~aa~~IQa~~Rg~~~r~~y 22 (26)
T smart00015 4 RAAIIIQAAWRGYLARKRY 22 (26)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 4666777777777777665
No 32
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=96.08 E-value=0.008 Score=37.20 Aligned_cols=19 Identities=58% Similarity=0.917 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy10328 483 RAALRIQTRVRGFLARRNY 501 (560)
Q Consensus 483 ~aa~~IQ~~~R~~~~Rr~~ 501 (560)
.+|+.||+.||||+.|+.|
T Consensus 4 ~aa~~IQa~~Rg~~~r~~y 22 (26)
T smart00015 4 RAAIIIQAAWRGYLARKRY 22 (26)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 5667777777777777766
No 33
>PTZ00014 myosin-A; Provisional
Probab=95.81 E-value=0.023 Score=65.29 Aligned_cols=41 Identities=17% Similarity=0.178 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy10328 483 RAALRIQTRVRGFLARRNYEATRAKIVICQASIRRFLAKKR 523 (560)
Q Consensus 483 ~aa~~IQ~~~R~~~~Rr~~~~~~~a~i~iQ~~~R~~~aR~~ 523 (560)
..+..||++||||+.|+.|.+.+.+++.||+.||++++++.
T Consensus 778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~ 818 (821)
T PTZ00014 778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAE 818 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999998865
No 34
>KOG2128|consensus
Probab=95.42 E-value=0.53 Score=55.64 Aligned_cols=114 Identities=25% Similarity=0.367 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHH-----HHHHHHhhccchhhHHHHhhh----hhh-cchhhhHHhHHHhhHHH----HHHHHHHh
Q psy10328 392 IQKNVRCFLVRKKYLSI-----LKSVATLQRWTRGYLARRLVL----HMR-RTRAAVRIQSAVRAFIR----RRQYLRLR 457 (560)
Q Consensus 392 IQ~~~Rg~l~R~~~~~~-----~~~~~~iQ~~~R~~~~r~~~~----~~~-~~~aa~~IQ~~~R~~~~----Rr~~~~~r 457 (560)
.|+..++...+.....+ ......+|+..||+..|.+.. .+. ......-||+.|||++. ........
T Consensus 513 ~q~~v~~i~~~~~l~~~~~s~~~s~~~~~qa~~rg~~~r~~~~~~~~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~ 592 (1401)
T KOG2128|consen 513 LQALVRGIVLRSALFSLYPSLGKSEKLRIQASERGFSTRNKFRSRLDFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAK 592 (1401)
T ss_pred HHHHhhhhHHHhhHHHHhhhhccccchhhhhhccccchHHHHHhhhhHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhh
Confidence 67777777766643332 123345599999998876432 222 45677889999999984 11223455
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Q psy10328 458 ALVLGLQCAARGMLVRREVRRVRE-----NRAALRIQTRVRGFLARRNYEATR 505 (560)
Q Consensus 458 ~aai~iQ~~~R~~~~Rr~~~~~~~-----~~aa~~IQ~~~R~~~~Rr~~~~~~ 505 (560)
.-++.+|++.||.++|+.+....+ ..+++.||+++|+...|..|..+.
T Consensus 593 ~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~ 645 (1401)
T KOG2128|consen 593 KEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRKDYKLLF 645 (1401)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccchHHHHHh
Confidence 689999999999999998866542 457899999999999999997654
No 35
>KOG0161|consensus
Probab=93.92 E-value=19 Score=45.50 Aligned_cols=125 Identities=21% Similarity=0.193 Sum_probs=63.0
Q ss_pred hcccchhhhcccccccc-chhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCcccc--ccccCchHHHH
Q psy10328 270 ACGVLETIRISAAGQFE-FNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNLKQY--NTAVHSMNEIG 346 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~~-~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~~~~--~~~~~~~k~~~ 346 (560)
|.||+|.+||+|.|+|. +..+.. -.||. ++ +-.....||-+...-.... +..|......| ..+...-+.++
T Consensus 687 cngVLEgIRicR~GfPnr~~~~eF--rqRy~-ll-a~~~~~~~~~d~k~~~~~~--~~~l~~d~~lyriG~tKvFfkaGv 760 (1930)
T KOG0161|consen 687 CNGVLEGIRICRQGFPNRMPFQEF--RQRYE-LL-AADEPKKGFSDGKKACEKI--LEELLLDKNLYRIGHTKVFFKAGV 760 (1930)
T ss_pred ccCcHHHHHHHHhhCccccchHHH--HHhHH-hh-hhhhccccccccchhHHHH--HHHHhcccceEeecceeeeehHHH
Confidence 45999999999999862 212222 34555 33 2333455555542222211 12222211001 11122234444
Q ss_pred HHHhhhcccCcccccccccceeeehhhHHHHHHHHHhh---hhhhhHhHHHHHHHHHHHHH
Q psy10328 347 EHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEK---LKRCCIVIQKNVRCFLVRKK 404 (560)
Q Consensus 347 ~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~---l~~aa~~IQ~~~Rg~l~R~~ 404 (560)
...|+.+ .+-.+..-.+.|+...+++|.+....+ ...++.+||+.+|.|+..+.
T Consensus 761 la~LEe~----Rd~~ls~ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~~~lr~ 817 (1930)
T KOG0161|consen 761 LAHLEEM----RDEKLSQIITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAYLKLRT 817 (1930)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4444444 333444444556666666665443222 34678999999999876553
No 36
>KOG4229|consensus
Probab=89.92 E-value=0.046 Score=63.75 Aligned_cols=205 Identities=17% Similarity=0.097 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHhccCCceeeecCCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHH
Q psy10328 225 QFRESLSLLMRTLNSTIPHYIRCIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLET 304 (560)
Q Consensus 225 ~f~~sL~~L~~~L~~t~~hfIrCIkPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~ 304 (560)
.+.....+++..+....+.|++|++-|.......|+...|..|++|+||.+++.|+.++++. ++......+.
T Consensus 794 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~t~~~~~~~v~~~~~~~--------~i~~~~~~~~ 865 (1062)
T KOG4229|consen 794 SPQVRKSKLESYLAIAKELFVRRFLENQKKIGLRFPDNVVLRQVSYTGELDQEQVRRSLYFA--------EISPQDSVNQ 865 (1062)
T ss_pred ccchhhccchhhhhhhhHHHHHHHHHhhhhhccCCChHHHHHhhhchhhhccchheeccccc--------cccchhcccc
Confidence 55667778999999999999999999988888899999999999999999999999888642 1111000000
Q ss_pred HHHHhhCCCCcccHHHHHHHHHhhhcCc--ccc----ccccCchHHHHHHHhhhcccCcccccccccceeeehhhH-HHH
Q psy10328 305 IRISAAGFPSRWTYGEFYNRYRVLCGNL--KQY----NTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQV-AYL 377 (560)
Q Consensus 305 ~r~~~~gyp~r~~~~eF~~ry~~L~~~~--~~~----~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~-~~L 377 (560)
.++..- .|......+.+. .+-+.. .+. .......+.....-++....+. ++|++.... ..+
T Consensus 866 ~~i~~~-~~~~~v~~~~~~---~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~k~~~~~~~~ 933 (1062)
T KOG4229|consen 866 SRIGLP-ETVDTVADEEFS---TLSCNADTIRLGVHVVFLLLNERSRTEVALKDEANDE--------LSFFKQKWFRLTL 933 (1062)
T ss_pred ccccCC-ccchhhchhhee---ecccCccchhccceEEeecccchHHHHHHHhHhhHHH--------HHHHHHHHHHhhh
Confidence 000000 111111111111 011110 000 0001111222222221111000 255544332 334
Q ss_pred HHHHHhhhhhhhHhHHHHHHHHHHHHHHH---HHHHHHHHhhccchhhHHHHhhhhhhcchhhhHHhHHHhhHHHHHHH
Q psy10328 378 EKLRAEKLKRCCIVIQKNVRCFLVRKKYL---SILKSVATLQRWTRGYLARRLVLHMRRTRAAVRIQSAVRAFIRRRQY 453 (560)
Q Consensus 378 e~~r~~~l~~aa~~IQ~~~Rg~l~R~~~~---~~~~~~~~iQ~~~R~~~~r~~~~~~~~~~aa~~IQ~~~R~~~~Rr~~ 453 (560)
++.....+....+.+| |+.++.|+... ..-.++..+|..|+.+..+.... -.+.+++.+|..+++...++.+
T Consensus 934 ~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~~~~~~~~~~~~~ 1008 (1062)
T KOG4229|consen 934 ERKGLLRLSEGSVLIQ--RLELLGRRTCPVAGAPAVAAASLQNAWPVYRELSGRL--GLRRSFIADQSPRSRPAYTMIF 1008 (1062)
T ss_pred ccccchhhcchhHHHH--HHHHhcccCCcchhhhhhhhhhccccchhhhhhhhhH--HHhhhhcchhcccccchhhhhH
Confidence 5555556677778888 78877776443 44456788888888877764332 3345677888888887665543
No 37
>KOG0163|consensus
Probab=81.71 E-value=20 Score=40.22 Aligned_cols=59 Identities=20% Similarity=0.287 Sum_probs=33.5
Q ss_pred HhHHHhhHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10328 440 IQSAVRAFIRRRQYLRLRALV---LGLQCAARGMLVRREVRRVRENRAALRIQTRVRGFLARRNYEATRAKIV 509 (560)
Q Consensus 440 IQ~~~R~~~~Rr~~~~~r~aa---i~iQ~~~R~~~~Rr~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~~~a~i 509 (560)
|=+.+..|+.+.+|.+...++ |++--.+ .| +..++.++|++.|||++|++++.......
T Consensus 779 lv~kVn~WLv~sRWkk~q~~a~sVIKLkNkI-------~y----Rae~v~k~Q~~~Rg~L~rkr~~~ri~~~~ 840 (1259)
T KOG0163|consen 779 LVAKVNKWLVRSRWKKSQYGALSVIKLKNKI-------IY----RAECVLKAQRIARGYLARKRHRPRIAGIR 840 (1259)
T ss_pred HHHHHHHHHHHhHHHHhhhhhhheeehhhHH-------HH----HHHHHHHHHHHHHHHHHHhhhchHHHHHH
Confidence 444556677776666554322 2221110 11 23567788999999999888876544333
No 38
>KOG4427|consensus
Probab=80.23 E-value=19 Score=40.41 Aligned_cols=20 Identities=40% Similarity=0.542 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy10328 482 NRAALRIQTRVRGFLARRNY 501 (560)
Q Consensus 482 ~~aa~~IQ~~~R~~~~Rr~~ 501 (560)
++||..||++||+|++|+++
T Consensus 30 ~~aa~~iq~~lrsyl~Rkk~ 49 (1096)
T KOG4427|consen 30 EAAALFIQRVLRSYLVRKKA 49 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555444
No 39
>KOG0162|consensus
Probab=76.58 E-value=3.9 Score=45.43 Aligned_cols=38 Identities=39% Similarity=0.493 Sum_probs=26.5
Q ss_pred hhhHHhHHHhhHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q psy10328 436 AAVRIQSAVRAFIRRRQYLRLRALVLGLQCAARGMLVRREV 476 (560)
Q Consensus 436 aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~~~R~~~~Rr~~ 476 (560)
-|.+||++||.+.+||+|.++|.-+..| .-|...||++
T Consensus 698 ~A~~IQkAWRrfv~rrky~k~ree~t~l---l~gKKeRRr~ 735 (1106)
T KOG0162|consen 698 MARRIQKAWRRFVARRKYEKMREEATKL---LLGKKERRRY 735 (1106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcchHHHHHH
Confidence 4678888888888888888888755544 2245555544
No 40
>KOG0165|consensus
Probab=75.93 E-value=9.8 Score=42.66 Aligned_cols=46 Identities=4% Similarity=-0.241 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy10328 482 NRAALRIQTRVRGFLARRNYEATRAKIVICQASIRRFLAKKRFKKM 527 (560)
Q Consensus 482 ~~aa~~IQ~~~R~~~~Rr~~~~~~~a~i~iQ~~~R~~~aR~~~~~l 527 (560)
+.++..+|...++--+++.++-...+...+|+.+++++.+...+.+
T Consensus 626 ~~~~~~~~~n~~~~~a~sie~~~~~~~~~Lr~~~~~~~i~~~Iqv~ 671 (1023)
T KOG0165|consen 626 TRLSPLCCENMAQSGAISIEKIFVLIRSCLRSIPCMEVIRYAIQVL 671 (1023)
T ss_pred HHhhHHHhhhhhhhchhhHHHHHHHHHhhhccchHHHHHHHHHHHH
Confidence 4567778888888877777777777777788888887777665554
No 41
>KOG4427|consensus
Probab=73.44 E-value=29 Score=39.11 Aligned_cols=34 Identities=26% Similarity=0.400 Sum_probs=23.0
Q ss_pred hhcchhhhHHhHHHhhHHHHHHHHHHhhhhhhHHHHHHHH
Q psy10328 431 MRRTRAAVRIQSAVRAFIRRRQYLRLRALVLGLQCAARGM 470 (560)
Q Consensus 431 ~~~~~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~~~R~~ 470 (560)
.+++.||+.||+.||+|++|+++. +.||.-|+-.
T Consensus 27 rrr~~aa~~iq~~lrsyl~Rkk~~------~~I~~e~d~~ 60 (1096)
T KOG4427|consen 27 RRREAAALFIQRVLRSYLVRKKAQ------IEIQEEFDNL 60 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHh
Confidence 345677888888888888887643 4566555543
No 42
>KOG0942|consensus
Probab=68.22 E-value=6.8 Score=44.77 Aligned_cols=22 Identities=23% Similarity=0.262 Sum_probs=15.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHH
Q psy10328 458 ALVLGLQCAARGMLVRREVRRV 479 (560)
Q Consensus 458 ~aai~iQ~~~R~~~~Rr~~~~~ 479 (560)
++++++|++|||+.+|++.+..
T Consensus 30 ~~av~vQs~~Rg~~~r~~~~~~ 51 (1001)
T KOG0942|consen 30 KNAVKVQSFWRGFRVRHNQKLL 51 (1001)
T ss_pred ccchHHHHHHHHHHHHHHHHHH
Confidence 4777777777777777655443
No 43
>KOG0942|consensus
Probab=62.90 E-value=18 Score=41.59 Aligned_cols=29 Identities=24% Similarity=0.381 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10328 478 RVRENRAALRIQTRVRGFLARRNYEATRA 506 (560)
Q Consensus 478 ~~~~~~aa~~IQ~~~R~~~~Rr~~~~~~~ 506 (560)
..+++++|+.+|++|||+++|++.+...+
T Consensus 25 ~rk~e~~av~vQs~~Rg~~~r~~~~~~~R 53 (1001)
T KOG0942|consen 25 ERKQEKNAVKVQSFWRGFRVRHNQKLLFR 53 (1001)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 33467899999999999999988766543
No 44
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=54.21 E-value=4.6 Score=46.63 Aligned_cols=16 Identities=25% Similarity=0.331 Sum_probs=14.9
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||||+|||+++||+
T Consensus 681 ~~GvlE~iri~r~Gfp 696 (767)
T cd01386 681 GSQILEAARLHRLGFP 696 (767)
T ss_pred hcccHHHHHHHhcCCc
Confidence 6899999999999986
No 45
>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]
Probab=50.31 E-value=1.5e+02 Score=34.35 Aligned_cols=18 Identities=22% Similarity=0.239 Sum_probs=12.0
Q ss_pred HhhhhhhHHHHHHHHHHH
Q psy10328 456 LRALVLGLQCAARGMLVR 473 (560)
Q Consensus 456 ~r~aai~iQ~~~R~~~~R 473 (560)
...-++++|...||+-.|
T Consensus 405 ~llni~klq~L~nG~~iR 422 (1054)
T COG5261 405 ALLNIVKLQILGNGYEIR 422 (1054)
T ss_pred HHHHHHHHHHhhcceeee
Confidence 344666777777777666
No 46
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=50.22 E-value=7.7 Score=44.16 Aligned_cols=15 Identities=13% Similarity=0.219 Sum_probs=5.9
Q ss_pred HHHHhccCCceeeec
Q psy10328 234 MRTLNSTIPHYIRCI 248 (560)
Q Consensus 234 ~~~L~~t~~hfIrCI 248 (560)
.+.|..+...||+-+
T Consensus 513 ~~ll~~S~n~~i~~l 527 (674)
T cd01384 513 QALLNASNCSFVAGL 527 (674)
T ss_pred HHHHHhCchHHHHHH
Confidence 333344444444333
No 47
>KOG3684|consensus
Probab=49.18 E-value=3.7e+02 Score=28.95 Aligned_cols=38 Identities=11% Similarity=0.091 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10328 464 QCAARGMLVRREVRRVRENRAALRIQTRVRGFLARRNY 501 (560)
Q Consensus 464 Q~~~R~~~~Rr~~~~~~~~~aa~~IQ~~~R~~~~Rr~~ 501 (560)
+.++--+..-.++.+..++.||..+|..|.-|...+-+
T Consensus 346 EKhVhNFMmDtqLTk~~KnAAA~VLqeTW~i~K~trl~ 383 (489)
T KOG3684|consen 346 EKHVHNFMMDTQLTKEHKNAAANVLQETWLIYKHTKLV 383 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 33333333444455555678889999999988877654
No 48
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=48.35 E-value=8.8 Score=43.73 Aligned_cols=19 Identities=21% Similarity=0.436 Sum_probs=11.5
Q ss_pred HHHHHHhccCCceeeecCC
Q psy10328 232 LLMRTLNSTIPHYIRCIKP 250 (560)
Q Consensus 232 ~L~~~L~~t~~hfIrCIkP 250 (560)
++++.|..+...+|+.|-|
T Consensus 512 ~~~~ll~~S~n~~i~~lf~ 530 (674)
T cd01378 512 DLIELMQSSSNPFLRSLFP 530 (674)
T ss_pred HHHHHHHhCchHHHHHHhc
Confidence 3555666666666666654
No 49
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=47.46 E-value=6.4 Score=44.83 Aligned_cols=17 Identities=47% Similarity=0.540 Sum_probs=15.3
Q ss_pred hcccchhhhcccccccc
Q psy10328 270 ACGVLETIRISAAGQFE 286 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~~ 286 (560)
|+||+|||||+++||+-
T Consensus 597 ~~GvlE~vri~r~Gyp~ 613 (677)
T cd01387 597 YSGVLETVRIRKEGFPV 613 (677)
T ss_pred HhchHHHHHHHHccCCc
Confidence 68999999999999863
No 50
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=47.19 E-value=16 Score=41.99 Aligned_cols=16 Identities=13% Similarity=0.318 Sum_probs=9.0
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||||||||+++||+
T Consensus 637 ~~GvLE~vri~r~Gyp 652 (717)
T cd01382 637 CSGMVSVLDLMQGGFP 652 (717)
T ss_pred hcchHHHHHHHHccCc
Confidence 3455555555555554
No 51
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=47.19 E-value=9.4 Score=43.67 Aligned_cols=16 Identities=50% Similarity=0.567 Sum_probs=8.5
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||+|||||+++||+
T Consensus 612 ~~GvlEtvrirr~Gyp 627 (693)
T cd01377 612 CNGVLEGIRICRKGFP 627 (693)
T ss_pred hcchHHHHHHHHcCCC
Confidence 3455555555555553
No 52
>KOG0165|consensus
Probab=46.77 E-value=1.7e+02 Score=33.46 Aligned_cols=40 Identities=25% Similarity=0.291 Sum_probs=23.3
Q ss_pred hHHhHHHhhHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH
Q psy10328 438 VRIQSAVRAFIRRRQYLRLRALVLGLQCAARGMLVRREVR 477 (560)
Q Consensus 438 ~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~~~R~~~~Rr~~~ 477 (560)
..+|+.-.....+..|-...+|+..+|++.+.|+.+..|.
T Consensus 174 ~~~~~~~~~~~~~~DfG~q~~a~~tl~Sy~~~WL~~~L~~ 213 (1023)
T KOG0165|consen 174 LRIQFFLQMAVYRRDFGQQKRAAITLQSYFRTWLTRKLFL 213 (1023)
T ss_pred hhhHHHhhhchhhhhhHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3444444444455555555567777777777776665553
No 53
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=46.33 E-value=9.3 Score=43.53 Aligned_cols=16 Identities=56% Similarity=0.941 Sum_probs=12.3
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||+||+||+++||+
T Consensus 598 ~~GvlE~iri~r~Gyp 613 (677)
T cd01383 598 CCGVLEVVRISRSGYP 613 (677)
T ss_pred hccHHHHHHHHhcCCC
Confidence 5688888888888875
No 54
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=45.40 E-value=7.4 Score=44.48 Aligned_cols=16 Identities=88% Similarity=1.122 Sum_probs=14.9
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||+|++||+++||+
T Consensus 611 ~~GvlE~iri~r~Gyp 626 (691)
T cd01380 611 ACGVLETIRISAAGFP 626 (691)
T ss_pred HhchHHHHHHHhccCC
Confidence 6899999999999986
No 55
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=45.39 E-value=7.4 Score=44.13 Aligned_cols=16 Identities=44% Similarity=0.526 Sum_probs=11.9
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||+|++||+++||+
T Consensus 575 ~~GvlE~iri~r~Gyp 590 (653)
T cd01379 575 YTGILETARIRRQGFS 590 (653)
T ss_pred HcchHHHHHHHHcCCC
Confidence 4577778888877775
No 56
>KOG0377|consensus
Probab=44.76 E-value=25 Score=37.10 Aligned_cols=18 Identities=33% Similarity=0.383 Sum_probs=12.0
Q ss_pred hhhhHHhHHHhhHHHHHH
Q psy10328 435 RAAVRIQSAVRAFIRRRQ 452 (560)
Q Consensus 435 ~aa~~IQ~~~R~~~~Rr~ 452 (560)
+||+.||+|||+|.+|..
T Consensus 18 kaAilIQkWYRr~~ARle 35 (631)
T KOG0377|consen 18 KAAILIQKWYRRYEARLE 35 (631)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 466677777777766664
No 57
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=44.43 E-value=7.9 Score=44.09 Aligned_cols=16 Identities=50% Similarity=0.634 Sum_probs=14.7
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||+|++||+++||+
T Consensus 589 ~~Gvle~iri~r~Gyp 604 (671)
T cd01381 589 YSGMMETIRIRRAGYP 604 (671)
T ss_pred hcchHHHHHHHHcCcC
Confidence 6799999999999986
No 58
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=41.26 E-value=9.3 Score=43.68 Aligned_cols=16 Identities=50% Similarity=0.648 Sum_probs=14.6
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||+||+||++.||+
T Consensus 611 ~~GvlE~irirr~Gyp 626 (692)
T cd01385 611 YTGMLETVRIRRAGYS 626 (692)
T ss_pred hhchHHHHHHHhccCC
Confidence 6799999999999986
No 59
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=36.59 E-value=12 Score=42.67 Aligned_cols=16 Identities=63% Similarity=0.644 Sum_probs=14.4
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||+||+||++.||+
T Consensus 595 ~~Gvle~iri~r~Gyp 610 (677)
T smart00242 595 YLGVLETIRIRRAGFP 610 (677)
T ss_pred hcccHHHHHHHHcccc
Confidence 6799999999999986
No 60
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=34.16 E-value=14 Score=42.29 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=23.1
Q ss_pred eccCccccCCC----cchhhhhhhhhHHHHHHhHHHHHH
Q psy10328 36 DIYGFETFDSN----NFEQFCINYANEKLQQQFNQHVFK 70 (560)
Q Consensus 36 Di~GFE~~~~N----sfEqlciNy~nErLq~~f~~~~f~ 70 (560)
+.-|||.+=.| .+.|+.+++.=+.-|..|.+--..
T Consensus 376 ~~NsfEQLcINy~NEkLq~~f~~~~f~~eq~~y~~EgI~ 414 (679)
T cd00124 376 EKNSFEQLCINYANEKLQQFFNQHVFKLEQEEYQEEGID 414 (679)
T ss_pred CCCCHHHHhcccchHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 34689966544 577888887777777776544333
No 61
>PF08763 Ca_chan_IQ: Voltage gated calcium channel IQ domain; InterPro: IPR014873 Ca2+ ions are unique in that they not only carry charge but they are also the most widely used of diffusible second messengers. Voltage-dependent Ca2+ channels (VDCC) are a family of molecules that allow cells to couple electrical activity to intracellular Ca2+ signalling. The opening and closing of these channels by depolarizing stimuli, such as action potentials, allows Ca2+ ions to enter neurons down a steep electrochemical gradient, producing transient intracellular Ca2+ signals. Many of the processes that occur in neurons, including transmitter release, gene transcription and metabolism are controlled by Ca2+ influx occurring simultaneously at different cellular locales. The pore is formed by the alpha-1 subunit which incorporates the conduction pore, the voltage sensor and gating apparatus, and the known sites of channel regulation by second messengers, drugs, and toxins []. The activity of this pore is modulated by 4 tightly-coupled subunits: an intracellular beta subunit; a transmembrane gamma subunit; and a disulphide-linked complex of alpha-2 and delta subunits, which are proteolytically cleaved from the same gene product. Properties of the protein including gating voltage-dependence, G protein modulation and kinase susceptibility can be influenced by these subunits. Voltage-gated calcium channels are classified as T, L, N, P, Q and R, and are distinguished by their sensitivity to pharmacological blocks, single-channel conductance kinetics, and voltage-dependence. On the basis of their voltage activation properties, the voltage-gated calcium classes can be further divided into two broad groups: the low (T-type) and high (L, N, P, Q and R-type) threshold-activated channels. The voltage-gated calcium channel alpha 1 subunit contains an IQ domain, named for its isoleucine-glutamine (IQ) motif, which interacts with hydrophobic pockets of Ca2+/calmodulin []. The interaction regulates two self-regulatory calcium dependent feedback mechanisms, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF). ; PDB: 3OXQ_F 2F3Z_B 3G43_E 2F3Y_B 2BE6_D 3DVM_B 3BXK_D 2VAY_B 3DVK_B 3BXL_B ....
Probab=31.71 E-value=45 Score=22.16 Aligned_cols=17 Identities=35% Similarity=0.567 Sum_probs=12.4
Q ss_pred hhhHHhHHHhhHHHHHH
Q psy10328 436 AAVRIQSAVRAFIRRRQ 452 (560)
Q Consensus 436 aa~~IQ~~~R~~~~Rr~ 452 (560)
|+..||-+||.+..|+.
T Consensus 11 At~lI~dyfr~~K~rk~ 27 (35)
T PF08763_consen 11 ATLLIQDYFRQFKKRKE 27 (35)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66778888887777664
No 62
>PF15157 IQ-like: IQ-like
Probab=29.00 E-value=45 Score=26.89 Aligned_cols=20 Identities=30% Similarity=0.429 Sum_probs=16.0
Q ss_pred hhhhhHhHHHHHHHHHHHHH
Q psy10328 385 LKRCCIVIQKNVRCFLVRKK 404 (560)
Q Consensus 385 l~~aa~~IQ~~~Rg~l~R~~ 404 (560)
+...+.+||++||.|++|..
T Consensus 46 Leskvkiiqrawre~lq~qd 65 (97)
T PF15157_consen 46 LESKVKIIQRAWREYLQRQD 65 (97)
T ss_pred hhHHHHHHHHHHHHHHHhcC
Confidence 44567889999999998775
No 63
>KOG1419|consensus
Probab=28.17 E-value=39 Score=36.88 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=17.6
Q ss_pred HHhhhhhhHHHHHHhhCCCCcc
Q psy10328 295 QLRACGVLETIRISAAGFPSRW 316 (560)
Q Consensus 295 Ql~~~~ile~~r~~~~gyp~r~ 316 (560)
+||-.+||..+++.+.|-..++
T Consensus 200 slRFlQILRmlr~DRrggTWKL 221 (654)
T KOG1419|consen 200 SLRFLQILRMLRMDRRGGTWKL 221 (654)
T ss_pred hhHHHHHHHHHHhhccCchhhh
Confidence 6888999999999988855443
No 64
>KOG0377|consensus
Probab=27.96 E-value=1.1e+02 Score=32.45 Aligned_cols=23 Identities=26% Similarity=0.086 Sum_probs=18.2
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHH
Q psy10328 457 RALVLGLQCAARGMLVRREVRRV 479 (560)
Q Consensus 457 r~aai~iQ~~~R~~~~Rr~~~~~ 479 (560)
-+||+.||.|+|++.+|.+.++.
T Consensus 17 ikaAilIQkWYRr~~ARle~rrr 39 (631)
T KOG0377|consen 17 IKAAILIQKWYRRYEARLEARRR 39 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 46888899999999988876543
No 65
>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]
Probab=21.43 E-value=1.2e+02 Score=34.94 Aligned_cols=101 Identities=25% Similarity=0.349 Sum_probs=62.8
Q ss_pred HHHHHHhhccchhhHHHHhhhhhh-----------cchhhhHHhHHHhhHHHHHHHHHHhh-------hhhhHHH-----
Q psy10328 409 LKSVATLQRWTRGYLARRLVLHMR-----------RTRAAVRIQSAVRAFIRRRQYLRLRA-------LVLGLQC----- 465 (560)
Q Consensus 409 ~~~~~~iQ~~~R~~~~r~~~~~~~-----------~~~aa~~IQ~~~R~~~~Rr~~~~~r~-------aai~iQ~----- 465 (560)
.+.++.||+.+|-+. +++....+ ....+..+|..++| |++|..... ....||.
T Consensus 314 s~qvv~Le~~iRl~i-qKR~~~ir~li~n~~pqeedtk~~erlqs~i~g---r~KY~~l~~rLslf~p~f~LlQ~~iPlf 389 (1054)
T COG5261 314 SKQVVVLERDIRLLI-QKRGNKIRLLIQNRMPQEEDTKFAERLQSNING---RKKYFPLDRRLSLFGPLFFLLQSSIPLF 389 (1054)
T ss_pred HHHHHHHHHHHHHHH-HhhhhhhhhhhcccCchhhcchHHHHHHHHHhC---ccccchHHhhhhhcCCceehhhhccchh
Confidence 356888999998443 33221111 23456789999998 777755432 3456662
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHh
Q psy10328 466 ---AARGMLVRREVRRVRENRAALRIQTRVRGFLARRNYE------ATRAKIVICQASIR 516 (560)
Q Consensus 466 ---~~R~~~~Rr~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~------~~~~a~i~iQ~~~R 516 (560)
.++|...|.....+ .-.+++|...||+..|+-|. ...-++...|..+|
T Consensus 390 S~aic~grv~r~sid~l---lni~klq~L~nG~~iRkl~~l~~s~~~~hlsv~~~q~L~R 446 (1054)
T COG5261 390 SIAICVGRVKRFSIDAL---LNIVKLQILGNGYEIRKLYSLGKSNCEEHLSVSLFQMLLR 446 (1054)
T ss_pred hhHHhhcchheecHHHH---HHHHHHHHhhcceeeeeeecccccchhHHHHHHHHHHHHH
Confidence 44555555444322 35678999999998885442 24457778888888
No 66
>PF09322 DUF1979: Domain of unknown function (DUF1979); InterPro: IPR015401 This N-terminal domain is functionally uncharacterised and found in various Oryza sativa (Rice) mutator-like transposases.
Probab=20.76 E-value=69 Score=23.33 Aligned_cols=19 Identities=26% Similarity=0.403 Sum_probs=16.7
Q ss_pred CCcEEEeecceEEEecccc
Q psy10328 146 GSFLVKHFADDVTYDTAGF 164 (560)
Q Consensus 146 ~~F~I~H~aG~V~Y~v~gf 164 (560)
-.|.|.|-.|.|.|-.+|+
T Consensus 5 ~~F~~~hg~GNvR~Gp~Gv 23 (58)
T PF09322_consen 5 VIFQIYHGEGNVRYGPTGV 23 (58)
T ss_pred eeEEEEEcCCceeECCCcc
Confidence 4799999999999998874
No 67
>PF10905 DUF2695: Protein of unknown function (DUF2695); InterPro: IPR024248 This bacterial family of proteins has no known function.
Probab=20.49 E-value=75 Score=23.35 Aligned_cols=44 Identities=20% Similarity=0.443 Sum_probs=33.5
Q ss_pred hhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHHHHHhhhcc
Q psy10328 52 CINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCIDLIESKLG 103 (560)
Q Consensus 52 ciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l~li~~~~G 103 (560)
|+.|.||+|...=-+|+|...++--..-+++| .++++-|++..|
T Consensus 1 Lf~yl~~~l~~~~CdHtlr~t~~fl~~~~~~~--------~~vl~~l~~nGg 44 (53)
T PF10905_consen 1 LFDYLDEKLSAFGCDHTLRLTRQFLRQRQLDW--------EDVLEWLRENGG 44 (53)
T ss_pred ChhHHHhHcCcCCCCCcHHHHHHHHHHcCCCH--------HHHHHHHHHcCC
Confidence 57899999998888899988877777777665 556777765544
No 68
>KOG2655|consensus
Probab=20.35 E-value=89 Score=32.66 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=26.8
Q ss_pred ceeEEeeccCccccCCCcch-hhhhhhhhHHHHHHh
Q psy10328 30 RFIGVLDIYGFETFDSNNFE-QFCINYANEKLQQQF 64 (560)
Q Consensus 30 ~~IgiLDi~GFE~~~~NsfE-qlciNy~nErLq~~f 64 (560)
-.+.|+|+|||-.+-.|+.. +=.+||..++.++||
T Consensus 79 l~LtvidtPGfGD~vdns~~w~pi~~yi~~q~~~yl 114 (366)
T KOG2655|consen 79 LNLTVIDTPGFGDAVDNSNCWRPIVNYIDSQFDQYL 114 (366)
T ss_pred EeeEEeccCCCcccccccccchhhhHHHHHHHHHHH
Confidence 35778999999988667655 356799988887775
Done!