Query psy10328
Match_columns 560
No_of_seqs 290 out of 2333
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 15:11:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10328.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10328hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dfs_A Myosin-5A; myosin-V, in 100.0 1E-115 5E-120 1010.9 39.7 509 16-558 418-940 (1080)
2 1kk8_A Myosin heavy chain, str 100.0 2.8E-92 9.7E-97 792.4 27.0 381 16-457 441-828 (837)
3 1w7j_A Myosin VA; motor protei 100.0 1.9E-91 6.3E-96 782.1 29.8 363 16-412 418-794 (795)
4 4anj_A Unconventional myosin-V 100.0 3.7E-91 1.3E-95 796.3 23.7 404 16-465 438-854 (1052)
5 1i84_S Smooth muscle myosin he 100.0 1.5E-88 5.3E-93 801.8 36.8 378 16-426 444-835 (1184)
6 1g8x_A Myosin II heavy chain f 100.0 2.9E-84 9.8E-89 743.1 38.3 373 16-451 436-812 (1010)
7 2ycu_A Non muscle myosin 2C, a 100.0 2.7E-85 9.1E-90 752.9 20.8 376 16-426 413-804 (995)
8 4db1_A Myosin-7; S1DC, cardiac 100.0 2.1E-85 7.2E-90 729.9 19.2 336 16-386 442-782 (783)
9 2v26_A Myosin VI; calmodulin-b 100.0 3E-84 1E-88 724.2 25.0 340 16-400 434-784 (784)
10 1w9i_A Myosin II heavy chain; 100.0 9.6E-85 3.3E-89 722.3 16.7 329 16-390 436-767 (770)
11 1lkx_A Myosin IE heavy chain; 100.0 4.2E-84 1.4E-88 713.8 19.4 322 16-385 367-696 (697)
12 2dfs_A Myosin-5A; myosin-V, in 99.8 6.4E-21 2.2E-25 221.0 16.3 142 363-508 768-913 (1080)
13 2ix7_C Myosin-5A; contractIle 99.1 8.9E-11 3.1E-15 87.7 6.7 53 434-486 5-57 (58)
14 2ix7_C Myosin-5A; contractIle 99.0 2.3E-09 7.9E-14 80.0 8.5 50 482-531 5-54 (58)
15 1n2d_C IQ2 and IQ3 motifs from 98.9 1.6E-09 5.4E-14 77.6 6.8 45 457-501 3-47 (48)
16 1n2d_C IQ2 and IQ3 motifs from 98.7 1.5E-08 5.1E-13 72.4 5.9 42 435-476 4-47 (48)
17 1wdc_A Scallop myosin; calcium 97.4 0.00014 4.7E-09 54.9 4.9 43 382-424 2-47 (64)
18 1wdc_A Scallop myosin; calcium 97.4 0.00044 1.5E-08 52.1 7.5 44 458-501 7-51 (64)
19 2bl0_A Major plasmodial myosin 97.4 0.00039 1.3E-08 52.2 6.7 44 458-501 5-49 (63)
20 1i84_S Smooth muscle myosin he 97.3 0.00045 1.5E-08 81.9 9.7 43 458-500 793-836 (1184)
21 2bl0_A Major plasmodial myosin 97.2 0.0004 1.4E-08 52.2 4.8 40 385-424 3-45 (63)
22 1kk8_A Myosin heavy chain, str 96.9 0.0016 5.4E-08 73.6 8.1 43 483-525 780-825 (837)
23 3gn4_A Myosin-VI; unconvention 96.7 0.029 1E-06 48.8 13.1 65 443-515 14-78 (148)
24 3gn4_A Myosin-VI; unconvention 95.8 0.039 1.3E-06 48.1 9.0 66 392-465 11-76 (148)
25 4anj_A Unconventional myosin-V 95.3 0.0016 5.4E-08 75.2 -2.1 57 372-428 783-843 (1052)
26 2l53_B CAM, voltage-gated sodi 94.9 0.025 8.7E-07 35.4 3.4 20 481-500 5-24 (31)
27 2kxw_B Sodium channel protein 94.8 0.011 3.9E-07 35.8 1.5 19 433-451 5-23 (27)
28 2kxw_B Sodium channel protein 94.7 0.02 6.8E-07 34.7 2.5 19 481-499 5-23 (27)
29 2l53_B CAM, voltage-gated sodi 94.6 0.015 5.3E-07 36.4 1.9 20 433-452 5-24 (31)
30 1g8x_A Myosin II heavy chain f 89.1 4.1 0.00014 47.0 14.4 16 270-285 678-693 (1010)
31 1w7j_A Myosin VA; motor protei 74.9 2.7 9.4E-05 47.1 5.3 29 502-530 765-793 (795)
32 4dck_A Sodium channel protein 68.6 5.6 0.00019 35.4 4.8 19 483-501 131-149 (168)
33 4dck_A Sodium channel protein 61.6 4.7 0.00016 36.0 2.9 22 433-454 129-150 (168)
34 2ycu_A Non muscle myosin 2C, a 56.2 5.8 0.0002 45.7 3.3 15 48-62 259-273 (995)
35 1w9i_A Myosin II heavy chain; 51.8 3.5 0.00012 45.9 0.5 16 270-285 678-693 (770)
36 4db1_A Myosin-7; S1DC, cardiac 51.4 3.2 0.00011 46.5 0.0 16 270-285 695-710 (783)
37 2v26_A Myosin VI; calmodulin-b 47.8 4.1 0.00014 45.6 0.2 16 270-285 687-702 (784)
38 1lkx_A Myosin IE heavy chain; 44.7 4.2 0.00014 44.9 -0.3 16 270-285 610-625 (697)
39 2iqc_A Protein FACF, fanconi a 37.1 18 0.00061 32.6 2.6 44 313-363 152-195 (210)
40 3dvk_B Voltage-dependent R-typ 33.1 20 0.00068 20.6 1.4 15 436-450 8-22 (23)
41 3nmd_A CGMP dependent protein 30.9 1.6E+02 0.0054 22.1 6.4 37 522-558 30-66 (72)
42 2kl8_A OR15; structural genomi 26.8 22 0.00075 25.8 1.1 12 152-163 28-39 (85)
No 1
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=1.3e-115 Score=1010.91 Aligned_cols=509 Identities=55% Similarity=0.885 Sum_probs=433.0
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+.++.+. +...+||||||||||+|+.|||||||||||||+||++|++|+|+.||+||.+|||+|+.|+|.||++||
T Consensus 418 ~iN~~l~~~~-~~~~~IgvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dn~~~i 496 (1080)
T 2dfs_A 418 HVNKALHSTV-KQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCI 496 (1080)
T ss_dssp HHHHHHCCSS-CCCEEEEEEEECCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCCCCCHHHH
T ss_pred HHHHhhcccc-ccCceEEeeccCCccccCcCCHHHHHHHhhhHHHHHHHHHHhhHHHHHHHhhcCCccccccccccHHHH
Confidence 4677666443 457899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCCCCCcEEEeecceEEEeccccccccccchhHH
Q psy10328 96 DLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEE 175 (560)
Q Consensus 96 ~li~~~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~~~ 175 (560)
|||++|.|||+||||||++|++||++|+++|+..|.++| ++|.+|+.....|+|+||||+|+|+++||++||+|.|+++
T Consensus 497 dlie~~~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~~~-~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~ 575 (1080)
T 2dfs_A 497 NLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKC-ALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEE 575 (1080)
T ss_dssp HHHHSTTSHHHHHHHHTTSTTCCHHHHHHHHHHHHBTTB-SSEECCTTCSSEEEEECSSCEEEEECTTHHHHHBCCCCHH
T ss_pred HHHhcCCceeeeccccccCCCCChHHHHHHHHHHhhcCC-CCccCCCCCCCceEEEecceEEEEehhhHHHhccccccHH
Confidence 999999999999999999999999999999999886888 9999999888999999999999999999999999999999
Q ss_pred HHHHHHhc-Ccccccccchhhh-------------hhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccC
Q psy10328 176 QIALLHSS-TNTSQQSSTKSGA-------------KRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTI 241 (560)
Q Consensus 176 ~~~ll~~S-~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~ 241 (560)
+++||++| +++|....+.... .+++....+++.+.|+...+.+++||+++|+.||+.||++|.+|+
T Consensus 576 ~~~ll~~S~~~~~v~~lf~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~ 655 (1080)
T 2dfs_A 576 QIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATT 655 (1080)
T ss_dssp HHHHHHTCSSCSHHHHSCC-------------------------------------CCCBHHHHHHHHHHHHHHHHHSSE
T ss_pred HHHHHHcccccHHHHHHhcccccccccccccccccccccccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhcC
Confidence 99999999 9999655442210 001111111111222233456789999999999999999999999
Q ss_pred CceeeecCCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHH
Q psy10328 242 PHYIRCIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEF 321 (560)
Q Consensus 242 ~hfIrCIkPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF 321 (560)
||||||||||+.+.|+.||...|++ ||+|+||||++|+++.|||+|++|.+|
T Consensus 656 phfVRCIkPN~~k~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gyp~R~~~~eF 707 (1080)
T 2dfs_A 656 PHYVRCIKPNDFKFPFTFDEKRAVQ----------------------------QLRACGVLETIRISAAGFPSRWTYQEF 707 (1080)
T ss_dssp EEEEEEECCCSSCCTTCCCHHHHHH----------------------------HHHTTTHHHHHHHHTTSCCEEEEHHHH
T ss_pred CeeEEEecCCCCCCchhcCHHhhHH----------------------------HHhhcccHHHHhHHhcCCCchhhHHHH
Confidence 9999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHhhhcCccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHHH
Q psy10328 322 YNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLV 401 (560)
Q Consensus 322 ~~ry~~L~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~ 401 (560)
+.||+.|+|.. ... .|.++.|+.+|..+.+++++|++|+|||||+.+.+..||++|...+..+|+.||++||||+.
T Consensus 708 ~~RY~~L~~~~---~~~-~d~k~~~~~il~~~~~~~~~~~~G~TKVF~r~g~l~~LE~~R~~~l~~aa~~IQa~~Rg~l~ 783 (1080)
T 2dfs_A 708 FSRYRVLMKQK---DVL-SDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLM 783 (1080)
T ss_dssp HHHHTTTSCGG---GCC-SSHHHHHHHHHTTTSCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcc---CCC-CChHHHHHHHHHHhcCChhhheeccccchhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999875 222 28999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhhHHHHhhhhhhcchhhhHHhHHHhhHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy10328 402 RKKYLSILKSVATLQRWTRGYLARRLVLHMRRTRAAVRIQSAVRAFIRRRQYLRLRALVLGLQCAARGMLVRREVRRVRE 481 (560)
Q Consensus 402 R~~~~~~~~~~~~iQ~~~R~~~~r~~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~~~R~~~~Rr~~~~~~~ 481 (560)
|++|.+++.+++.||++||++++|+.+..+++..||+.||++||||++|+.|..++.+++.||++|||+++|+.+..++.
T Consensus 784 Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~~lr~ 863 (1080)
T 2dfs_A 784 RKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLR 863 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy10328 482 NRAALRIQTRVRGFLARRNYEATRAKIVICQASIRRFLAKKRFKKMKKEARSVEHVKKLNKGLENKIISMQQRIGDL 558 (560)
Q Consensus 482 ~~aa~~IQ~~~R~~~~Rr~~~~~~~a~i~iQ~~~R~~~aR~~~~~lk~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~ 558 (560)
+.+|+.||++||||++|+.|...+++++.||+.||++++|++++.|+.+++.++++++.+.++|+++++|+++|+++
T Consensus 864 ~~aav~IQ~~~Rg~l~R~~y~~~~~aai~iQs~~R~~laRr~~~~Lk~ear~~~~l~~~~~~LE~kl~eLq~rL~~~ 940 (1080)
T 2dfs_A 864 EHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQ 940 (1080)
T ss_dssp HHHHHHHHHHHTTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHTTTC-------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999764
No 2
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=2.8e-92 Score=792.41 Aligned_cols=381 Identities=40% Similarity=0.665 Sum_probs=322.6
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccc-cCCHhH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-YDNQPC 94 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~-~dn~~~ 94 (560)
.+|+.++ +..+...+||||||||||+|+.|||||||||||||+||++|++++|+.||+||.+|||+|..|+| .||++|
T Consensus 441 ~IN~~l~-~~~~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~ 519 (837)
T 1kk8_A 441 RVNKTLD-TKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMC 519 (837)
T ss_dssp HHHHHHC-CCCCCCEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHH
T ss_pred HHHHhcc-CCCCCcceEEEEecCCccccccccHHHHHHHHhhHHHHHHHHHhhhHHHHHHhhhcCCceeecccccCHHHH
Confidence 4677776 33456789999999999999999999999999999999999999999999999999999999999 599999
Q ss_pred HHHHhhhcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCC------CCCcEEEeecceEEEecccccccc
Q psy10328 95 IDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG------AGSFLVKHFADDVTYDTAGFLEKN 168 (560)
Q Consensus 95 l~li~~~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~------~~~F~I~H~aG~V~Y~v~gfl~kN 168 (560)
||||++|.|||+||||||++|++||++|++||...+.++| ++|.+|+.. ...|+|+||||+|+|+++||++||
T Consensus 520 idLiekp~GIlslLDEec~~p~~tD~tf~~kl~~~~~~~~-~~f~~p~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKN 598 (837)
T 1kk8_A 520 IDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKN-RMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKN 598 (837)
T ss_dssp HHHHHSTTSHHHHHHHHTTCTTCCHHHHHHHHHHHHTTTC-SSEECCCSCSSTTCCCCSEEEEETTEEEEECCSSHHHHH
T ss_pred HHHHhcCCcHHHHHHHHhcCCCCChHHHHHHHHHHhcCCC-cCccCCCccccccccCCceEEeeccCcccccHHHHHHhc
Confidence 9999999999999999999999999999999876666888 999998753 679999999999999999999999
Q ss_pred ccchhHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeec
Q psy10328 169 RDTVYEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCI 248 (560)
Q Consensus 169 ~d~l~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCI 248 (560)
+|.|++++++||++|+++|....+.... +.+ ++ +..........+||+++|+.||++||++|.+|+|||||||
T Consensus 599 kD~l~~~~~~ll~~S~~~~v~~Lf~~~~-~~~----g~--~~~~k~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCI 671 (837)
T 1kk8_A 599 KDPINENVVALLGASKEPLVAELFKAPE-EPA----GG--GKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCI 671 (837)
T ss_dssp SCCCCHHHHHHHHTCSSHHHHHHTCC-------------------------CCHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cccccHHHHHHHHhchHHHHHHHhcccc-ccc----CC--CCCCCCCCCCCCchHHHHHHHHHHHHHHHHccCCeeeeee
Confidence 9999999999999999999776653311 000 00 0000001135689999999999999999999999999999
Q ss_pred CCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhh
Q psy10328 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVL 328 (560)
Q Consensus 249 kPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L 328 (560)
|||+.+.|+.||...|++ ||+|+||||++|++++|||+|++|.+|+.||+.|
T Consensus 672 kPN~~k~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gfp~R~~f~eF~~RY~~L 723 (837)
T 1kk8_A 672 IPNELKQPGLVDAELVLH----------------------------QLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSIL 723 (837)
T ss_dssp CCCSSCCTTCCCHHHHHH----------------------------HHTTSSSCC-----CCCSCEEEEHHHHHHHHGGG
T ss_pred CCCccCCcccccchheee----------------------------eccccCccHHHHHHHHhccccccHHHHHHHHHHh
Confidence 999999999999999999 8888888888888999999999999999999999
Q ss_pred hcCccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHHHHHHHHHH
Q psy10328 329 CGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSI 408 (560)
Q Consensus 329 ~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~~~~~~ 408 (560)
++...+. ...|.++.|+.+|..+.+++.+|++|+||||||.+++..||.+|.+.+..+++.||++||||++|++|.++
T Consensus 724 ~~~~~~~--~~~d~k~~~~~ll~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQa~~Rg~l~R~~~~k~ 801 (837)
T 1kk8_A 724 APNAIPQ--GFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKL 801 (837)
T ss_dssp SGGGCCC-----CHHHHHHHHHHHHTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccc--CCCCHHHHHHHHHHHcCCCccceeecCEEEEehhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9875221 13689999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred HHHHHHhhccchhhHHHHhhhhhhcchhhhHHhHHHhhHHHHHHHHHHh
Q psy10328 409 LKSVATLQRWTRGYLARRLVLHMRRTRAAVRIQSAVRAFIRRRQYLRLR 457 (560)
Q Consensus 409 ~~~~~~iQ~~~R~~~~r~~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~r 457 (560)
+. ++.|+++||+.||+|++|+.|..++
T Consensus 802 ~~----------------------~r~a~~~IQ~~~R~~~~~r~~~w~~ 828 (837)
T 1kk8_A 802 QD----------------------QRIGLSVIQRNIRKWLVLRNWQWWK 828 (837)
T ss_dssp HH----------------------HHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HH----------------------HHHHHHHHHHHHHHHHHHcchHHHH
Confidence 32 1246677777777777777665433
No 3
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=1.9e-91 Score=782.10 Aligned_cols=363 Identities=59% Similarity=0.987 Sum_probs=316.7
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+.++.+. +...+||||||||||+|+.|||||||||||||+||++|++++|+.||+||.+|||+|..|+|.||++||
T Consensus 418 ~IN~~l~~~~-~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~DN~~~i 496 (795)
T 1w7j_A 418 HVNKALHSTV-KQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCI 496 (795)
T ss_dssp HHHHHHCCSS-CCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCCCHHHH
T ss_pred HHHHhhcCCc-cccceEEeeccCcccccCcCCHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCcccccCccccHHHH
Confidence 4677666443 357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCCCCCcEEEeecceEEEeccccccccccchhHH
Q psy10328 96 DLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTVYEE 175 (560)
Q Consensus 96 ~li~~~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l~~~ 175 (560)
|||+++.|||+||||||++|++||++|++||+..|.++| ++|.+|+.....|+|+||||+|+|+++||++||+|.|+++
T Consensus 497 dLie~~~GIlslLDEec~~p~~tD~~f~~kl~~~~~~~~-~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~ 575 (795)
T 1w7j_A 497 NLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKC-ALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEE 575 (795)
T ss_dssp HHHHSTTSHHHHHHHHHTSTTCCHHHHHHHHHHHHTTTC-TTEECCTTCSSEEEEECSSCEEEEECTTHHHHHHCCCCHH
T ss_pred HHHHhcCCHHHhhhhhccCCCCChHHHHHHHHHHhhccC-CccccCCCCCCceEEEecceEEEEechhHHhhccccccHH
Confidence 999999999999999999999999999999999886888 9999999888999999999999999999999999999999
Q ss_pred HHHHHHhcC-cccccccchhhh-----h--------hhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccC
Q psy10328 176 QIALLHSST-NTSQQSSTKSGA-----K--------RMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTI 241 (560)
Q Consensus 176 ~~~ll~~S~-~~~~~~~~~~~~-----~--------~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~ 241 (560)
+++||++|+ ++|....+.... . ++++...++..+.++...+.+++||+++|+.||++||++|.+|+
T Consensus 576 ~~~ll~~S~~~~~v~~lf~~~~~~~~~~~~~~s~~~~~s~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~ 655 (795)
T 1w7j_A 576 QIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATT 655 (795)
T ss_dssp HHHHHHTCSSCSHHHHTTC---------------------------------------CCHHHHHHHHHHHHHHHHHTSE
T ss_pred HHHHHHhccccHHHHHHhccccccccccccccccccccccccccccccccccccCCCCCcHHHHHHHHHHHHHHHHhcCC
Confidence 999999999 998655442210 0 00111111111122223456788999999999999999999999
Q ss_pred CceeeecCCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHH
Q psy10328 242 PHYIRCIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEF 321 (560)
Q Consensus 242 ~hfIrCIkPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF 321 (560)
||||||||||+.+.|+.||...|++ ||+|+||||++|++++|||+|++|.+|
T Consensus 656 phfVRCIkPN~~k~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gyp~R~~f~eF 707 (795)
T 1w7j_A 656 PHYVRCIKPNDFKFPFTFDEKRAVQ----------------------------QLRACGVLETIRISAAGFPSRWTYQEF 707 (795)
T ss_dssp EEEEEEECCCTTCCTTCCCHHHHHH----------------------------HHHHTTHHHHHHHHHHSCCEEEEHHHH
T ss_pred CeEEEEeCCCCcCChhhcCcccccc----------------------------hhhhCChHHHHHHHHcCCCccccHHHH
Confidence 9999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHhhhcCccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHHH
Q psy10328 322 YNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLV 401 (560)
Q Consensus 322 ~~ry~~L~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~ 401 (560)
+.||+.|++.. ... .|.++.|+.+|..+.+++++|++|+||||||.+.+..||.+|.+.+..+++.||++||||++
T Consensus 708 ~~RY~~L~~~~---~~~-~d~k~~~~~il~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQ~~~Rg~l~ 783 (795)
T 1w7j_A 708 FSRYRVLMKQK---DVL-SDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLM 783 (795)
T ss_dssp HHHHGGGSCGG---GCC-SCHHHHHHHHHHHHCCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcc---cCC-CCHHHHHHHHHHHhCCCccceEEcCceEEEchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999875 222 28999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10328 402 RKKYLSILKSV 412 (560)
Q Consensus 402 R~~~~~~~~~~ 412 (560)
|++|.+++.++
T Consensus 784 R~~~~~~r~a~ 794 (795)
T 1w7j_A 784 RKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHHhc
Confidence 99999988764
No 4
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=3.7e-91 Score=796.27 Aligned_cols=404 Identities=31% Similarity=0.483 Sum_probs=349.8
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+.++.+ ...++||||||||||+|+.|||||||||||||+||++|++++|+.||+||.+|||+|+.|+|.||++||
T Consensus 438 ~IN~~l~~~--~~~~~IGILDI~GFE~f~~NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~i 515 (1052)
T 4anj_A 438 RVNQCFPFE--TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCI 515 (1052)
T ss_dssp HHHTTSCCS--CCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHH
T ss_pred hhhcccccc--cccceEEEEecCCCcccccCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCcccCCcCCcHHHH
Confidence 467766544 456899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCC----------CCCcEEEeecceEEEecccc
Q psy10328 96 DLIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG----------AGSFLVKHFADDVTYDTAGF 164 (560)
Q Consensus 96 ~li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~----------~~~F~I~H~aG~V~Y~v~gf 164 (560)
|||++ |.|||++|||||++|++||++|+++|+..| ++| ++|.+|+.+ +..|+|+||||+|+|+++||
T Consensus 516 dLie~kp~GIl~lLDEe~~~p~~tD~~f~~kl~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gf 593 (1052)
T 4anj_A 516 DLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKH-KDH-FRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQF 593 (1052)
T ss_dssp HHHHCTTTSHHHHHHHHHHSSSCCHHHHHHHHHHTT-TTC-TTEECGGGCSCSTTTTCCTTSEEEEEETTEEEEEECTTH
T ss_pred HHHHcCcccHHHHHHHHhcCCCCcHHHHHHHHHHHh-ccC-ccccCCcccccccccccCCCCCeEEEcCCccEEEecCCh
Confidence 99995 589999999999999999999999999988 888 888877642 35799999999999999999
Q ss_pred ccccccchhHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCce
Q psy10328 165 LEKNRDTVYEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHY 244 (560)
Q Consensus 165 l~kN~d~l~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hf 244 (560)
++||+|.|++++++||++|+++|....+........ .......+.+..||+++|+.||+.||++|.+|+|||
T Consensus 594 leKNrD~l~~~~~~ll~~S~~~~i~~Lf~~~~~~~~--------~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phf 665 (1052)
T 4anj_A 594 VEKNNDALHMSLESLICESRDKFIRELFESSTNNNK--------DTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASF 665 (1052)
T ss_dssp HHHHBCCCCHHHHHHHHTCSCHHHHHTTCC------------------------CCBHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred hhhccccccHHHHHHHHhCCcHHHHHhhhccccccc--------cccCCCCCCCCccHHHHHHHHHHHHHHHHcCcCCEE
Confidence 999999999999999999999997776643211100 011112345568999999999999999999999999
Q ss_pred eeecCCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHH
Q psy10328 245 IRCIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNR 324 (560)
Q Consensus 245 IrCIkPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~r 324 (560)
|||||||+.+.|+.||...|++ ||+|+||||++|++++|||+|++|.+|++|
T Consensus 666 VRCIkPN~~k~p~~fd~~~V~~----------------------------QLr~~GvLE~irI~r~Gyp~R~~f~eF~~R 717 (1052)
T 4anj_A 666 IRCIKPNLKMTSHHFEGAQILS----------------------------QLQCSGMVSVLDLMQGGFPSRASFHELYNM 717 (1052)
T ss_dssp EEEECCCSSCCSSCCCHHHHHH----------------------------HHHHHTHHHHHHHTTTCCCEEEEHHHHHHH
T ss_pred EEEECCCccCCCCcCCHHHHHH----------------------------HHHHhhHHHHHHHHhcCCCCcCcHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999
Q ss_pred HHhhhcCccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHHHHHH
Q psy10328 325 YRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKK 404 (560)
Q Consensus 325 y~~L~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~~ 404 (560)
|+.|+|.. ....|+++.|+.+|+.+.+++.+|++|+||||||.+++..||++|...+..+++.||+ +|||++|++
T Consensus 718 Y~~L~~~~----~~~~d~k~~~~~iL~~l~l~~~~y~iG~TKVFlr~~~~~~LE~~r~~~~~~~~~~iq~-~r~~l~r~~ 792 (1052)
T 4anj_A 718 YKKYMPDK----LARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKR-VNHWLICSR 792 (1052)
T ss_dssp HHTTSCSS----GGGSCHHHHHHHHHHHTSCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHhCccc----ccCCCHHHHHHHHHHHcCcCcccEEecCCEEeeCcCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 99999875 2236899999999999999999999999999999999999999999999998888885 799999999
Q ss_pred HHHHHHHHHHhhccchhhHHHHhh--hhhhcchhhhHHhHHHhhHHHHHHHHHHhhhhhhHHH
Q psy10328 405 YLSILKSVATLQRWTRGYLARRLV--LHMRRTRAAVRIQSAVRAFIRRRQYLRLRALVLGLQC 465 (560)
Q Consensus 405 ~~~~~~~~~~iQ~~~R~~~~r~~~--~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~ 465 (560)
|++++.+++.||..+|+...|+.. ...+.-.++..+++.||++..|++|... .+...||.
T Consensus 793 ~~k~~~~a~~i~~~~r~~~~r~~~~~~w~~l~~~v~pll~~~~~~~~~r~~~~~-~~~~~~~~ 854 (1052)
T 4anj_A 793 WKKVQWCSLSVIKLKNKIKYRAEAVSKGEELFTGVVPILVELDGDVNGHKFSVS-GEGEGDAT 854 (1052)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCEEEEEEEEEEETTEEEEEE-EEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhhhhhHHHHHHHHHhhhhhcc-CCccccch
Confidence 999999999999988887776532 2223345677889999999999998553 34455554
No 5
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=100.00 E-value=1.5e-88 Score=801.82 Aligned_cols=378 Identities=40% Similarity=0.646 Sum_probs=322.6
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccc-cCCHhH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-YDNQPC 94 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~-~dn~~~ 94 (560)
.+|+.++....+..++||||||||||+|+.|||||||||||||+||++|++|+|+.||++|.+|||+|..|+| .||++|
T Consensus 444 ~iN~~l~~~~~~~~~~IgvLDi~GFE~f~~NsfeQlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~ 523 (1184)
T 1i84_S 444 RVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPC 523 (1184)
T ss_dssp HHTTTCC------CEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHH
T ss_pred HHHHhhCCCccCCcceEEEeecCCcCCCCcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCccccccCCCcHHH
Confidence 4677666443456789999999999999999999999999999999999999999999999999999999999 599999
Q ss_pred HHHHhhhc---ccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCC--CCCCcEEEeecceEEEeccccccccc
Q psy10328 95 IDLIESKL---GILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRF--GAGSFLVKHFADDVTYDTAGFLEKNR 169 (560)
Q Consensus 95 l~li~~~~---Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~--~~~~F~I~H~aG~V~Y~v~gfl~kN~ 169 (560)
||||++|. |||+||||||++|++||.+|+++|+..| ++| ++|.+|+. ...+|+|+||||+|+|+++||++||+
T Consensus 524 ~~lie~~~~~~Gil~lLdee~~~p~~td~~~~~kl~~~~-~~~-~~~~~~~~~~~~~~F~i~Hyag~V~Y~~~gfl~kN~ 601 (1184)
T 1i84_S 524 IELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQ-GNH-AKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNM 601 (1184)
T ss_dssp HHTTSCCSSSCCHHHHHHHTTSCTTCCHHHHHHHHHHHT-SSC-TTEEECSSCTTTCEEEEECSSCEEEEECTTHHHHHH
T ss_pred HHHHhCCCCCCCchhhhhhhhCCCCCChHHHHHHHHHHh-CCC-CCccCCCCCCCCCcEEEECCCceEEeccCCchhhcc
Confidence 99999887 9999999999999999999999999988 888 99999975 46899999999999999999999999
Q ss_pred cchhHHHHHHHHhcCcccccccchhhh-----hhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCce
Q psy10328 170 DTVYEEQIALLHSSTNTSQQSSTKSGA-----KRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHY 244 (560)
Q Consensus 170 d~l~~~~~~ll~~S~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hf 244 (560)
|+|+++++.||+.|+++|+...+.... +..+.....+ .+..+...++..+||+++|+.||+.||++|.+|.|||
T Consensus 602 d~l~~~~~~ll~~s~~~~~~~lf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~tv~~~f~~~l~~L~~~l~~t~phf 680 (1184)
T 1i84_S 602 DPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTESS-LPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNF 680 (1184)
T ss_dssp CCCCHHHHHHHHTCSCHHHHHHHSCCTTCCCC----------------------CCCHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred CcccHHHHHHHHhCchHHHHHHhccccccccccccccccccc-cCccccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCc
Confidence 999999999999999999665553210 0000000000 0000011234568999999999999999999999999
Q ss_pred eeecCCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHH
Q psy10328 245 IRCIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNR 324 (560)
Q Consensus 245 IrCIkPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~r 324 (560)
|||||||+.+.|+.||...|++ ||+|+||||++|+++.|||+|++|.+|+.|
T Consensus 681 vRCIkPN~~k~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gfp~R~~~~~F~~r 732 (1184)
T 1i84_S 681 VRCIIPNHEKRAGKLDAHLVLE----------------------------QLRCNGVLEGIRICRQGFPNRIVFQEFRQR 732 (1184)
T ss_dssp CCEECCCSSCCSSCCCHHHHHH----------------------------HHHHTTHHHHHHHHHHSCCEEEEHHHHHHH
T ss_pred eeeeCCCCcCCCCcccHHHHHH----------------------------HHhhcCchHHHHhHhhcCcccccHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999
Q ss_pred HHhhhcCccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHHHHHH
Q psy10328 325 YRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKK 404 (560)
Q Consensus 325 y~~L~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~~ 404 (560)
|++|.|...+. ...|.+..|..+|..+.+++..|++|+|||||+.+.+..||.+|...+..+++.||++||||++|++
T Consensus 733 y~~L~~~~~~~--~~~d~k~~~~~lL~~l~l~~~~~~iG~TKVF~r~g~l~~LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~ 810 (1184)
T 1i84_S 733 YEILAANAIPK--GFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKA 810 (1184)
T ss_dssp TTTTCTTTSCS--SCCCHHHHHHHHHHTTTCCTTTCCBCSSEEEECTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccCCc--CCCCHHHHHHHHHHHcCCCccceeEcCeEEEEechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998865221 1358899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HHHHHhhccchhhHHHH
Q psy10328 405 YLSIL---KSVATLQRWTRGYLARR 426 (560)
Q Consensus 405 ~~~~~---~~~~~iQ~~~R~~~~r~ 426 (560)
|.+++ .+++.||+.||+|+.++
T Consensus 811 ~~k~~~~~~a~~~iQ~~~r~~~~~k 835 (1184)
T 1i84_S 811 FAKRQQQLESIFCIQYNVRSFMNVX 835 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98764 45666666666666654
No 6
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=2.9e-84 Score=743.09 Aligned_cols=373 Identities=37% Similarity=0.595 Sum_probs=323.0
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCcccccccc-CCHhH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFY-DNQPC 94 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~-dn~~~ 94 (560)
.+|+.++... ...+||||||||||+|+.|||||||||||||+||++|++++|+.||+||.+|||+|..|+|. ||++|
T Consensus 436 ~IN~~l~~~~--~~~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~ 513 (1010)
T 1g8x_A 436 KINNVLCSER--KAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQAT 513 (1010)
T ss_dssp HHHHHHCCSS--CSEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCSHHH
T ss_pred HHHHHhcCCC--cCceeeeccCcccccCCcCcHHHHHHHhhhHHHHHHHHHHhhHHHHHHhhccCCCccccccccChHHH
Confidence 4677666432 67899999999999999999999999999999999999999999999999999999999995 99999
Q ss_pred HHHHhh--hcccccchhhhhcCCCCCcHHHHHHHHHHhcC-CCCCCccccCCCCCCcEEEeecceEEEeccccccccccc
Q psy10328 95 IDLIES--KLGILDLLDEECKMPKGSDTSWAEKLYTKCSD-KWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDT 171 (560)
Q Consensus 95 l~li~~--~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~-~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~ 171 (560)
||||++ |.|||+||||||++|++||++|++|+...+ + +| ++|.+|+.....|+|+||||+|+|+++||++||+|.
T Consensus 514 idlie~~~~~Gil~lLdee~~~p~~td~~f~~kl~~~~-~~~~-~~f~~~~~~~~~F~i~HyAG~V~Y~~~gfleKN~D~ 591 (1010)
T 1g8x_A 514 IDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHF-SKKN-AKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDP 591 (1010)
T ss_dssp HHHHHCTTTTCHHHHHHHHTTSSSCCHHHHHHHHHHHH-TTTC-TTEECCTTCSSEEEEEETTEEEEEECTTHHHHHHCC
T ss_pred HHHHhcCCCCeeehhhhHHhCCCCCChHHHHHHHHHHh-cCCC-CCcccCCCCCCCEEEeeeceEEEEeecCcccccccc
Confidence 999997 799999999999999999999999999888 7 88 999999887789999999999999999999999999
Q ss_pred hhHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCC
Q psy10328 172 VYEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPN 251 (560)
Q Consensus 172 l~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN 251 (560)
|+++++.||++|+++|....+.... . . + ....++..+||+++|+.||+.||++|.+|+||||||||||
T Consensus 592 l~~~~~~ll~~S~~~~~~~lf~~~~-----~-~-~-----~~~k~~~~~tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN 659 (1010)
T 1g8x_A 592 LQQDLELCFKDSSDNVVTKLFNDPN-----I-A-S-----RAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPN 659 (1010)
T ss_dssp CCHHHHHHHTTCSCHHHHHHHHCHH-----H-H-S-----CCCCSSSCCCHHHHHHHHHHHHHHHHTTSEEEEEEEECSC
T ss_pred ccHHHHHHHHhCcHHHHHHHhcccc-----c-c-c-----CCCCCCCCCchHHHHHHHHHHHHHHHHhcCCeeeeeecCC
Confidence 9999999999999999777664321 0 0 0 0122345689999999999999999999999999999999
Q ss_pred CccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcC
Q psy10328 252 DTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGN 331 (560)
Q Consensus 252 ~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~ 331 (560)
+.+.|+.||...|++ ||+|+||||++|+++.|||+|++|.+|+.||+.|++.
T Consensus 660 ~~k~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gfp~r~~~~~F~~RY~~L~~~ 711 (1010)
T 1g8x_A 660 NKQLPAKLEDKVVLD----------------------------QLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPN 711 (1010)
T ss_dssp SSCCTTCCCHHHHHH----------------------------HHHHSSHHHHHHHHTTSCCEEEEHHHHHHHHGGGSTT
T ss_pred cccccCCcChhhcch----------------------------hcccCccHHHHHHHHhCCcccccHHHHHHHHHHhCCC
Confidence 999999999999999 9999999999999999999999999999999999987
Q ss_pred ccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Q psy10328 332 LKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSILKS 411 (560)
Q Consensus 332 ~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~~~~~~~~~ 411 (560)
. .....|.+++|+.+|..+.+++.+|++|+||||||.+++..||.+|...+..+++.||-..++.
T Consensus 712 ~---~~~~~d~~~~~~~ll~~~~~~~~~~~~G~tkVF~r~~~l~~LE~~R~~~l~~~~~~iQY~~~a~------------ 776 (1010)
T 1g8x_A 712 V---PRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRLGSEQTKSDYLKRAN------------ 776 (1010)
T ss_dssp C---CTTCSCHHHHHHHHHHHTTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHH------------
T ss_pred C---CcCCCCHHHHHHHHHHHcCCCccceeehhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 2 2224689999999999999999999999999999999999999999999999998888544332
Q ss_pred HHHhhccchhhHHHHhhhhhhcchhhhHHhHHHhhHHHHH
Q psy10328 412 VATLQRWTRGYLARRLVLHMRRTRAAVRIQSAVRAFIRRR 451 (560)
Q Consensus 412 ~~~iQ~~~R~~~~r~~~~~~~~~~aa~~IQ~~~R~~~~Rr 451 (560)
.++.|++...+.. .......++..||+.++++...+
T Consensus 777 --~L~~WIr~kqa~l--~~r~~~~sl~~IQ~ll~~f~~fk 812 (1010)
T 1g8x_A 777 --ELVQWINDKQASL--ESRDFGDSIESVQSFMNAHKEYK 812 (1010)
T ss_dssp --HHHHHHHHHHHHH--HCCCCCSSHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHH--HhhhccccHHHHHHHHHHHHHHH
Confidence 2344555554432 12223456778888887764433
No 7
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=2.7e-85 Score=752.86 Aligned_cols=376 Identities=38% Similarity=0.594 Sum_probs=314.4
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccc-cCCHhH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-YDNQPC 94 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~-~dn~~~ 94 (560)
.+|+.++........+||||||||||+|+.|||||||||||||+||++|++++|+.||+||.+|||+|..|+| .||++|
T Consensus 413 ~iN~~l~~~~~~~~~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~ 492 (995)
T 2ycu_A 413 RLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPC 492 (995)
T ss_dssp HHHHHHCCCSCCCSEEEEEEECCCBCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHH
T ss_pred HHHHHhcCCCCCccceEEEeccccccccccchHHHHHHHhhHHHHHHHHHHhhhHHHHHHHhccCCCccccccccChHHH
Confidence 4677766432225789999999999999999999999999999999999999999999999999999999999 699999
Q ss_pred HHHHhh---hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCC--CCCcEEEeecceEEEeccccccccc
Q psy10328 95 IDLIES---KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG--AGSFLVKHFADDVTYDTAGFLEKNR 169 (560)
Q Consensus 95 l~li~~---~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~--~~~F~I~H~aG~V~Y~v~gfl~kN~ 169 (560)
||||++ |.|||+||||||++|++||.+|++||+..| ++| ++|.+|+.. ...|+|+||||+|+|+++||++||+
T Consensus 493 idlie~~~~p~Gil~lLdee~~~p~~tD~~f~~kl~~~~-~~~-~~f~~~~~~~~~~~F~i~HyAG~V~Y~~~gfleKN~ 570 (995)
T 2ycu_A 493 IDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQ-GGH-PKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNM 570 (995)
T ss_dssp HHHHHCCSSSCCHHHHHHHSSSSTTCCHHHHHHHHHHHH-TTS-TTEECCCTTTCCSSEEEEETTEEEEECCTTHHHHHH
T ss_pred HHHHhccCCCCchhhhhHHHhcCCCCchHHHHHHHHHhc-CCC-CCcccCCccCCCCeeEEECCCCCccccccchhhhcc
Confidence 999998 789999999999999999999999999999 888 999998753 6799999999999999999999999
Q ss_pred cchhHHHHHHHHhcCcccccccchhhh-----hhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCce
Q psy10328 170 DTVYEEQIALLHSSTNTSQQSSTKSGA-----KRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHY 244 (560)
Q Consensus 170 d~l~~~~~~ll~~S~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hf 244 (560)
|.|+++++.||++|+++|+...+.... ++.+.+ +++ +..+...++..+||+++|+.||+.||++|.+|+|||
T Consensus 571 D~l~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~~--~~~-~~g~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~phf 647 (995)
T 2ycu_A 571 DPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQVSSL--GDG-PPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSF 647 (995)
T ss_dssp CCCCHHHHHHHHTCSSHHHHHHTSSCCSSCSCCC----------------CCCSSCCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred ccccHHHHHHHHhCcHHHHHHHhhcccccccccccccc--ccc-ccccCcCCCCCCchHHHHHHHHHHHHHHHHhcCcce
Confidence 999999999999999999665553210 000000 000 000011234578999999999999999999999999
Q ss_pred eeecCCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHH
Q psy10328 245 IRCIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNR 324 (560)
Q Consensus 245 IrCIkPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~r 324 (560)
|||||||+.+.|+.||...|++ ||+|+||||++|+++.|||+|++|.+|+.|
T Consensus 648 VRCIkPN~~k~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gfp~r~~~~~F~~R 699 (995)
T 2ycu_A 648 VRCIVPNHEKRAGKLEPRLVLD----------------------------QLRCNGVLEGIRICRQGFPNRILFQEFRQR 699 (995)
T ss_dssp EEEECCCSSCCTTCCCTTTHHH----------------------------HHHHHTHHHHHHHHHHSCCEEEEHHHHHHH
T ss_pred eeeecCCccccccccCHHHHHH----------------------------HhcccchHHHHHHHHhcCCccccHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999
Q ss_pred HHhhhcCccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhh-----hHhHHHHHHHH
Q psy10328 325 YRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRC-----CIVIQKNVRCF 399 (560)
Q Consensus 325 y~~L~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~a-----a~~IQ~~~Rg~ 399 (560)
|++|++...+. ...|.++.|+.+|..+.+++.+|++|+||||||.+++..||.+|...+..+ |..++.++++.
T Consensus 700 Y~~L~~~~~~~--~~~d~~~~~~~ll~~~~~~~~~~~~G~tkVF~r~~~~~~LE~~R~~~l~~~eYe~~a~~Ll~WIr~k 777 (995)
T 2ycu_A 700 YEILTPNAIPK--GFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERASEQTKSDYLKRANELVQWINDK 777 (995)
T ss_dssp HGGGSTTTSCS--CCCCSCCSCCCSCCCSSEEESSEEEESSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHhCcccccc--cCCCHHHHHHHHHHHcCCChhheeecceEEEEecchhhhHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99999875321 135788999999999999999999999999999999999999999887654 23344444444
Q ss_pred HHHHHHHHHHHHHHHhhccchhhHHHH
Q psy10328 400 LVRKKYLSILKSVATLQRWTRGYLARR 426 (560)
Q Consensus 400 l~R~~~~~~~~~~~~iQ~~~R~~~~r~ 426 (560)
..+..+.....++..+|+.+|++..++
T Consensus 778 ~a~l~~r~~~~sl~~IQ~~ir~f~~fr 804 (995)
T 2ycu_A 778 QASLESRDFGDSIESVQSFMNAHKEYK 804 (995)
T ss_dssp TCCCSCHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 444444455566666666666665544
No 8
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=2.1e-85 Score=729.92 Aligned_cols=336 Identities=43% Similarity=0.689 Sum_probs=267.4
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccc-cCCHhH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDF-YDNQPC 94 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~-~dn~~~ 94 (560)
.+|+.++.. .+..++||||||||||+|+.|||||||||||||+||++|++|+|+.||+||.+|||+|..|+| .||++|
T Consensus 442 ~IN~~l~~~-~~~~~~IGvLDI~GFE~f~~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~~Dn~~~ 520 (783)
T 4db1_A 442 RINATLETK-QPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQAC 520 (783)
T ss_dssp HHHHHHCCS-CCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCGGGGGHHH
T ss_pred HHHHhcCCC-CCCCceEEEeccccccccccCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCCcccccccCChHHH
Confidence 467766643 455689999999999999999999999999999999999999999999999999999999999 599999
Q ss_pred HHHHhhhcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCC----CCCcEEEeecceEEEecccccccccc
Q psy10328 95 IDLIESKLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG----AGSFLVKHFADDVTYDTAGFLEKNRD 170 (560)
Q Consensus 95 l~li~~~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~----~~~F~I~H~aG~V~Y~v~gfl~kN~d 170 (560)
||||++|.|||+||||||++|++||.+|++||+..|.++| ++|.+|+.. ...|+|+||||+|+|+++||++||+|
T Consensus 521 idLiekp~Gil~lLDEec~~p~~tD~tf~~kl~~~~~~~~-~~f~~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD 599 (783)
T 4db1_A 521 IDLIEKPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKS-ANFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKD 599 (783)
T ss_dssp HHHHHSTTSHHHHHCC-TTCTTCCHHHHHHHHHHHHTTTC-TTEECCCC----C-CCEEEEETTEEEEECCTTHHHHHHC
T ss_pred HHHHhCCCchHhhhhHHhcCCCCCHHHHHHHHHHHhcCCC-CCccCCCCCCCCCCCCeEEeCcCCceEEeCcChhhhccc
Confidence 9999999999999999999999999999999998887888 999998753 57899999999999999999999999
Q ss_pred chhHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCC
Q psy10328 171 TVYEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKP 250 (560)
Q Consensus 171 ~l~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkP 250 (560)
.|++++++||++|+++|....+.......+. .....++.......+||+++|+.||+.||++|.+|+|||||||||
T Consensus 600 ~l~~~~~~ll~~S~~~~v~~lf~~~~~~~~~----~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkP 675 (783)
T 4db1_A 600 PLNETVVGLYQKSSLKLLSTLFANYAGADAP----IEKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIP 675 (783)
T ss_dssp CCCHHHHHHHHTCSSHHHHHHHHSCC----------------------CCCHHHHHHHHHHHHHHHHHTSEEEEEEEECC
T ss_pred cccHHHHHHHHHCccHHHHHHhhcccccccc----ccCccCCCCcCCCCccHHHHHHHHHHHHHHHHHccCCEEEEeeCC
Confidence 9999999999999999976665321100000 000000011122458999999999999999999999999999999
Q ss_pred CCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhc
Q psy10328 251 NDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCG 330 (560)
Q Consensus 251 N~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~ 330 (560)
|+.+.|+.||...|++ ||+|+||||++|++++|||+|++|.+|+.||+.|.+
T Consensus 676 N~~k~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~ 727 (783)
T 4db1_A 676 NETKSPGVMDNPLVMH----------------------------QLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNP 727 (783)
T ss_dssp CSSCCTTCCCHHHHHH----------------------------HHHHSSHHHHHHHHHTSCCEEEEC------------
T ss_pred CcccCCCcccchhhhe----------------------------eccccChHhheeehhcCCCccCcHHHHHHHHHHhCc
Confidence 9999999999999999 999999999999999999999999999999999998
Q ss_pred CccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhh
Q psy10328 331 NLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLK 386 (560)
Q Consensus 331 ~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~ 386 (560)
...+ .....|.++.|+.+|+.+.+++.+|++|+||||||.+++..||.+|.+++.
T Consensus 728 ~~~~-~~~~~d~k~~~~~ll~~~~~~~~~~~~G~TKVFlr~g~~~~LE~~R~~~l~ 782 (783)
T 4db1_A 728 AAIP-EGQFIDSRKGAEKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERLS 782 (783)
T ss_dssp ---------------CCHHHHSSSSCGGGEEECSSEEEECTTHHHHHHHHC-----
T ss_pred cccC-CCCCCCHHHHHHHHHHhCCCCcCeEEECCEEEEECcCHHHHHHHHHHHHhc
Confidence 7522 111257899999999999999999999999999999999999999987654
No 9
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=3e-84 Score=724.17 Aligned_cols=340 Identities=36% Similarity=0.584 Sum_probs=295.9
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+.++.+ ....+||||||||||+|+.|||||||||||||+||++|++++|+.||+||.+|||+|..|+|.||++||
T Consensus 434 ~IN~~l~~~--~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~i 511 (784)
T 2v26_A 434 RVNQCFPFE--TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCI 511 (784)
T ss_dssp HHHTTSCCS--CCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHH
T ss_pred HHHHhcCcc--cccceeeecccCCcccCCcCCHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCCcccccccChHHHH
Confidence 467766543 456899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCC----------CCCcEEEeecceEEEecccc
Q psy10328 96 DLIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFG----------AGSFLVKHFADDVTYDTAGF 164 (560)
Q Consensus 96 ~li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~----------~~~F~I~H~aG~V~Y~v~gf 164 (560)
|||++ |.|||+||||||++|++||++|++||+..| ++| ++|.+|+.+ ...|+|+||||+|+|+++||
T Consensus 512 dLie~kp~GIlslLDEe~~~p~~tD~~f~~kl~~~~-~~~-~~~~~p~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gf 589 (784)
T 2v26_A 512 DLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKH-KDH-FRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQF 589 (784)
T ss_dssp HHHHCTTTSHHHHHHHHHHSSSCCHHHHHHHHHHHT-TTC-TTEECGGGCSSGGGTTSCTTSEEEEEETTEEEEEECTTH
T ss_pred HHHhhccccHHHHHHHHhcCCCCChHHHHHHHHHHh-CCC-cccccCCCccccccccccCCCceEeeecCccEeeeccCH
Confidence 99996 589999999999999999999999999988 888 888887643 35899999999999999999
Q ss_pred ccccccchhHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCce
Q psy10328 165 LEKNRDTVYEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHY 244 (560)
Q Consensus 165 l~kN~d~l~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hf 244 (560)
++||+|.|+++++.||++|+++|....+......+. + + .....+....||+++|+.||++||++|.+|+|||
T Consensus 590 leKN~D~l~~~~~~ll~~S~~~~l~~Lf~~~~~~~~-----~--~-~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phf 661 (784)
T 2v26_A 590 VEKNNDALHMSLESLICESRDKFIRELFESSTNNNK-----D--T-KQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASF 661 (784)
T ss_dssp HHHTBCCCCHHHHHHHHTCSCHHHHHHC------------------------CCCCBHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHhccchhhHHHHHHHHhchhhHHHHHccccccccc-----C--c-ccCCCCCccccHHHHHHHHHHHHHHHHHccCCee
Confidence 999999999999999999999997766533210000 0 0 0011334568999999999999999999999999
Q ss_pred eeecCCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHH
Q psy10328 245 IRCIKPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNR 324 (560)
Q Consensus 245 IrCIkPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~r 324 (560)
|||||||+.+.|+.||...|++ ||+|+||||++|++++|||+|++|.+|+.|
T Consensus 662 VRCIkPN~~k~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gyp~R~~f~eF~~R 713 (784)
T 2v26_A 662 IRCIKPNLKMTSHHFEGAQILS----------------------------QLQCSGMVSVLDLMQGGFPSRASFHELYNM 713 (784)
T ss_dssp EEEECCCSSCCSSCCCHHHHHH----------------------------HHHHTTHHHHHHHHTSCCSEEEEHHHHHHH
T ss_pred EEEecCCcccccCccccccccc----------------------------cccccccHHHHHHHHhcCCccccHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999
Q ss_pred HHhhhcCccccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHH
Q psy10328 325 YRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFL 400 (560)
Q Consensus 325 y~~L~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l 400 (560)
|+.|++.. ....|.++.|+.+|..+.+++.+|++|+||||||.+.+..||+++.......+ .|++.+|+|+
T Consensus 714 Y~~L~~~~----~~~~d~~~~~~~ll~~~~~~~~~~~~G~TKVF~r~g~~~~le~~~~~~~~~~~-~ii~~v~~wl 784 (784)
T 2v26_A 714 YKKYMPDK----LARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA-ELVKRVNHWL 784 (784)
T ss_dssp HGGGCCHH----HHTSCHHHHHHHHHHHTTCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHHHH-HHHHHHHHHC
T ss_pred HhhcCCcc----cCCCCHHHHHHHHHHHcCCCcCcEEeCCceEEEcCCHHHHHHHHHhhCHHHHH-HHHHHHHhhC
Confidence 99998864 22368899999999999999999999999999999999999988665544433 3557778774
No 10
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=9.6e-85 Score=722.33 Aligned_cols=329 Identities=40% Similarity=0.653 Sum_probs=255.8
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCcccccccc-CCHhH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFY-DNQPC 94 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~-dn~~~ 94 (560)
.+|+.++.. .+ ..+||||||||||+|+.|||||||||||||+||++|++++|+.||+||.+|||+|..|+|. ||++|
T Consensus 436 ~IN~~l~~~-~~-~~~IGvLDI~GFE~F~~NsFEQlCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~ 513 (770)
T 1w9i_A 436 KINNVLCQE-RK-AYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQAT 513 (770)
T ss_dssp HHHHHHCCS-CC-SEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGGGHHH
T ss_pred HHHHHhcCC-CC-CCeeeeccCccccccccCCHHHHHHHhhHHHHHHHHHhhhhHHHHHHhhccCCCceeeccccCcHHH
Confidence 467777633 23 7899999999999999999999999999999999999999999999999999999999994 99999
Q ss_pred HHHHhh--hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccCCCCCCcEEEeecceEEEeccccccccccch
Q psy10328 95 IDLIES--KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPRFGAGSFLVKHFADDVTYDTAGFLEKNRDTV 172 (560)
Q Consensus 95 l~li~~--~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~v~gfl~kN~d~l 172 (560)
||||++ |.|||+||||||++|++||.+|++||...+.++| ++|.+|+.....|+|+||||+|+|+++||++||+|.|
T Consensus 514 idLiek~~p~GilslLDEec~~p~~tD~~f~~kL~~~~~~~~-~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l 592 (770)
T 1w9i_A 514 IDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKN-AKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPL 592 (770)
T ss_dssp HHHHHCTTTTCHHHHHHHHHSSSSCCHHHHHHHHHHHHTTTS-TTEECCSSCSSEEEEEETTEEEEEECTTHHHHHHCCC
T ss_pred HHHHhCCCCCchhhhhhhhhCCCCCChHHHHHHHHHHhcCCC-CCccCCCCCCCceEeeccCccccccccChhhhccCcc
Confidence 999997 7999999999999999999999999877766888 9999998777899999999999999999999999999
Q ss_pred hHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeecCCCC
Q psy10328 173 YEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCIKPND 252 (560)
Q Consensus 173 ~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCIkPN~ 252 (560)
+++++.||++|+++|....+.... + + + +...+...+||+++|+.||+.||++|.+|+||||||||||+
T Consensus 593 ~~~~~~ll~~S~~~~v~~Lf~~~~--~------~--~--~~~k~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~ 660 (770)
T 1w9i_A 593 QQDLELCFKDSSDNVVTKLFNDPN--I------A--S--RAKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNN 660 (770)
T ss_dssp CHHHHHHHHTCSSTTHHHHHHCHH--H------H--C--CCEETTEECCHHHHHHHHHHHHHHHHHTSEEEEEEEECSCS
T ss_pred cHHHHHHHHhchHHHHHHHhhccC--C------C--C--CCCCCCCCcchhHHHHHHHHHHHHHHHhcCceeeeeecCCc
Confidence 999999999999999777664321 0 0 0 01122346899999999999999999999999999999999
Q ss_pred ccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhhhcCc
Q psy10328 253 TKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVLCGNL 332 (560)
Q Consensus 253 ~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L~~~~ 332 (560)
.+.|+.||...|++ ||+|+||||++|++++|||+|++|.+|+.||+.|++ .
T Consensus 661 ~k~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~-~ 711 (770)
T 1w9i_A 661 KQLPAKLEDKVVLD----------------------------QLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAP-N 711 (770)
T ss_dssp SCCSSCCCHHHHHH----------------------------HHHHSSHHHHHHHTTSSCCEEEESCC------------
T ss_pred ccccCccCchhhHh----------------------------HhcccchHHHHHHHHhcCcccccHHHHHHHHHHhcc-c
Confidence 99999999999999 999999999999999999999999999999999998 4
Q ss_pred cccccccCchHHHHHHHhhhcccCcccccccccceeeehhhHHHHHHHHHhhhhhhhH
Q psy10328 333 KQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCI 390 (560)
Q Consensus 333 ~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~ 390 (560)
. .....|.+++|+.+|+.+.+++.+|++|+||||||.+++..||.+|.+.+..+++
T Consensus 712 ~--~~~~~d~k~~~~~lL~~~~~~~~~~~~G~TKVF~r~~~l~~LE~~R~~~l~~~~~ 767 (770)
T 1w9i_A 712 V--PRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEARELRGDYKDD 767 (770)
T ss_dssp --------------------------CCCCCSSEEEECTTTTTC--------------
T ss_pred c--ccCCCCHHHHHHHHHHhcCCCcccEEeCCeeEEecccHHHHHHHHHHHHHHHHhc
Confidence 2 2123688999999999999999999999999999999999999999998877654
No 11
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=4.2e-84 Score=713.77 Aligned_cols=322 Identities=39% Similarity=0.685 Sum_probs=280.5
Q ss_pred cccccccCCCCCCCceeEEeeccCccccCCCcchhhhhhhhhHHHHHHhHHHHHHHHHHHHhhcCCccccccccCCHhHH
Q psy10328 16 SSNQGAAFQTTPPSRFIGVLDIYGFETFDSNNFEQFCINYANEKLQQQFNQHVFKLEQEEYLQEGIEWKFIDFYDNQPCI 95 (560)
Q Consensus 16 ~~~~~~~~~~~~~~~~IgiLDi~GFE~~~~NsfEqlciNy~nErLq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~l 95 (560)
.+|+.++... ....+||||||||||+|+.|||||||||||||+||++|++++|+.||+||.+|||+|..|+|.||++||
T Consensus 367 ~IN~~l~~~~-~~~~~IGvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dN~~~i 445 (697)
T 1lkx_A 367 KINTIINCTT-EKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPIC 445 (697)
T ss_dssp HHHHHHCCCS-CCCCEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHH
T ss_pred HHHhhcCCCC-CCceeEEeeccccccccCcCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCHHHH
Confidence 4677666432 346899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-hcccccchhhhhcCCCCCcHHHHHHHHHHhcCCCCCCccccC------CCCCCcEEEeecceEEEecccccccc
Q psy10328 96 DLIES-KLGILDLLDEECKMPKGSDTSWAEKLYTKCSDKWSKHFVKPR------FGAGSFLVKHFADDVTYDTAGFLEKN 168 (560)
Q Consensus 96 ~li~~-~~Gll~lLdee~~~~~~td~~fl~~l~~~~~~~~~~~~~~~~------~~~~~F~I~H~aG~V~Y~v~gfl~kN 168 (560)
|||++ |.|||+||||||++|++||.+|++||+..| ++| ++|.+|+ .....|+|+||||+|+|+++||++||
T Consensus 446 dLie~kp~GilslLDEec~~p~~tD~~f~~kl~~~~-~~~-~~f~~~~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKN 523 (697)
T 1lkx_A 446 ELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQF-EKN-PHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKN 523 (697)
T ss_dssp HHTTSSSSSHHHHHHHHHHSTTCCHHHHHHHHHHHS-SSS-TTEECTTTSCCTTSCTTEEEEEETTEEEEEECTTHHHHH
T ss_pred HHHhcccCChhhhhHHhhCCCCCChHHHHHHHHHHh-cCC-CccccCCCCCCCccccCceeeeeeeeEEEEccCChhhhh
Confidence 99996 699999999999999999999999999887 888 8998765 23579999999999999999999999
Q ss_pred ccchhHHHHHHHHhcCcccccccchhhhhhhHHHhhccccCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCceeeec
Q psy10328 169 RDTVYEEQIALLHSSTNTSQQSSTKSGAKRMAALAASKTATLPSSKSKQHKKTVGSQFRESLSLLMRTLNSTIPHYIRCI 248 (560)
Q Consensus 169 ~d~l~~~~~~ll~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~sL~~L~~~L~~t~~hfIrCI 248 (560)
+|.|++++++||++|+++|....+..... ...+++++||+++|+.||++||++|.+|+|||||||
T Consensus 524 kD~l~~~~~~ll~~S~~~~l~~lf~~~~~---------------~~~~~r~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCI 588 (697)
T 1lkx_A 524 KDTLFGDLISSMQSSSDPLVQGLFPPTRP---------------EDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCI 588 (697)
T ss_dssp HCCCCHHHHHHHHTCCSHHHHHHCC--------------------------CCHHHHHHHHHHHHHHHHTTSEEEEEEEE
T ss_pred cccccHHHHHHHhccchHHHHHhcccccc---------------ccccCCCCcHHHHHHHHHHHHHHHHHccCCcceEee
Confidence 99999999999999999997776633100 112345689999999999999999999999999999
Q ss_pred CCCCccCccccchhhhhhhhhhcccchhhhccccccccchhhhhhHHHhhhhhhHHHHHHhhCCCCcccHHHHHHHHHhh
Q psy10328 249 KPNDTKRAFEFNAHRTMQQLRACGVLETIRISAAGQFEFNAHRTMQQLRACGVLETIRISAAGFPSRWTYGEFYNRYRVL 328 (560)
Q Consensus 249 kPN~~~~p~~fd~~~v~~q~r~~G~~e~~ri~~~g~~~~~~~~~~~Ql~~~~ile~~r~~~~gyp~r~~~~eF~~ry~~L 328 (560)
|||+.+.|+.||...|++ ||+|+||||++|++++|||+|++|.+|+.||+.|
T Consensus 589 kPN~~k~p~~fd~~~V~~----------------------------QLr~~GvlE~iri~r~Gyp~R~~~~eF~~RY~~L 640 (697)
T 1lkx_A 589 KSNDNKQAGVIDEDRVRH----------------------------QVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKML 640 (697)
T ss_dssp CCCTTCCTTCCCHHHHHH----------------------------HHHHHTSHHHHHHHHHSCSBCCBSHHHHTTSCSS
T ss_pred cCCCcCCCCCcChhhccc----------------------------cCcccccHHHHHHHhcCCCccccHHHHHHHHHHh
Confidence 999999999999999999 9999999999999999999999999999999999
Q ss_pred hcCccccccccCchHHHHHHHhhhcccCcccccccccceeeehh-hHHHHHHHHHhhh
Q psy10328 329 CGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFGKTKIFFRSG-QVAYLEKLRAEKL 385 (560)
Q Consensus 329 ~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iGktkVFlr~~-~~~~Le~~r~~~l 385 (560)
++...+ ....+.++.|+.+|..+.+++.+|++|+||||||.+ .+..||.+|..++
T Consensus 641 ~~~~~~--~~~~~~k~~~~~ll~~~~~~~~~~~~G~TKVF~r~~~~l~~LE~~R~~~l 696 (697)
T 1lkx_A 641 CKKTWP--SFNGTAKQATELILQQHNIDKEEIRMGKTKVFIRNPTTLFYFEEKRELEM 696 (697)
T ss_dssp SCC-----------CHHHHHHHHTTCCCGGGEEECSSBEEESSSHHHHHHHTCC----
T ss_pred Cccccc--ccCCCHHHHHHHHHHHcCCCcCcEEeCCeeEEEeCCchHHHHHHHHHhhC
Confidence 986521 123678999999999999999999999999999996 7899999887654
No 12
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.85 E-value=6.4e-21 Score=221.01 Aligned_cols=142 Identities=22% Similarity=0.328 Sum_probs=122.0
Q ss_pred cccceeeehhhHHHHHHHHHhhhhhhhHhHHHHHHHHHHHHHHHHH--HHHHHHhhccchhhHHHHhhhhhhcchhhhHH
Q psy10328 363 GKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSI--LKSVATLQRWTRGYLARRLVLHMRRTRAAVRI 440 (560)
Q Consensus 363 GktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~~~~~~--~~~~~~iQ~~~R~~~~r~~~~~~~~~~aa~~I 440 (560)
...-+.++...++++.+.+...+..+++.||++||||+.|+.+..+ ..+++.||++||++.+|+.+..++ .+++.|
T Consensus 768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~lr--~aai~I 845 (1080)
T 2dfs_A 768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMR--DATIAL 845 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHHHHHHH--HHHHHH
Confidence 3445778888889999988888899999999999999999988755 578999999999999998766554 789999
Q ss_pred hHHHhhHHHHHHHHHHhh--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10328 441 QSAVRAFIRRRQYLRLRA--LVLGLQCAARGMLVRREVRRVRENRAALRIQTRVRGFLARRNYEATRAKI 508 (560)
Q Consensus 441 Q~~~R~~~~Rr~~~~~r~--aai~iQ~~~R~~~~Rr~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~~~a~ 508 (560)
|++|||+++|+.|..++. +++.||++|||+++|+.|...+ .+++.||+.||++++|+.+..++.++
T Consensus 846 Qs~~Rg~laRr~~~~lr~~~aav~IQ~~~Rg~l~R~~y~~~~--~aai~iQs~~R~~laRr~~~~Lk~ea 913 (1080)
T 2dfs_A 846 QALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTL--KAIVYLQCCYRRMMAKRELKKLKIEA 913 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHTTTTH--HHHHHHHHHHHHHHHHHHTTTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987764 8999999999999999998765 89999999999999999987765443
No 13
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=99.13 E-value=8.9e-11 Score=87.75 Aligned_cols=53 Identities=28% Similarity=0.475 Sum_probs=48.4
Q ss_pred chhhhHHhHHHhhHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10328 434 TRAAVRIQSAVRAFIRRRQYLRLRALVLGLQCAARGMLVRREVRRVRENRAAL 486 (560)
Q Consensus 434 ~~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~~~R~~~~Rr~~~~~~~~~aa~ 486 (560)
..||+.||+.||||++|+.|..++.+++.||++|||+++|+.+..++++.||+
T Consensus 5 ~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r~~~aA~ 57 (58)
T 2ix7_C 5 RAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAAT 57 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 46899999999999999999999999999999999999999999988877764
No 14
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.96 E-value=2.3e-09 Score=79.99 Aligned_cols=50 Identities=26% Similarity=0.458 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy10328 482 NRAALRIQTRVRGFLARRNYEATRAKIVICQASIRRFLAKKRFKKMKKEA 531 (560)
Q Consensus 482 ~~aa~~IQ~~~R~~~~Rr~~~~~~~a~i~iQ~~~R~~~aR~~~~~lk~~~ 531 (560)
..+|+.||++||||++|+.|...+.+++.||+.|||+++|+.+..++.+.
T Consensus 5 ~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r~~~ 54 (58)
T 2ix7_C 5 RAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTK 54 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 46888889999999999998888888999999999999998888876653
No 15
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.94 E-value=1.6e-09 Score=77.56 Aligned_cols=45 Identities=24% Similarity=0.302 Sum_probs=32.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10328 457 RALVLGLQCAARGMLVRREVRRVRENRAALRIQTRVRGFLARRNY 501 (560)
Q Consensus 457 r~aai~iQ~~~R~~~~Rr~~~~~~~~~aa~~IQ~~~R~~~~Rr~~ 501 (560)
+.+++.||++|||+++|+.+..++++.||+.||++||||++|+.|
T Consensus 3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 456677777777777777777666666777788888877777765
No 16
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.74 E-value=1.5e-08 Score=72.44 Aligned_cols=42 Identities=29% Similarity=0.309 Sum_probs=33.2
Q ss_pred hhhhHHhHHHhhHHHHHHHHHHhh--hhhhHHHHHHHHHHHHHH
Q psy10328 435 RAAVRIQSAVRAFIRRRQYLRLRA--LVLGLQCAARGMLVRREV 476 (560)
Q Consensus 435 ~aa~~IQ~~~R~~~~Rr~~~~~r~--aai~iQ~~~R~~~~Rr~~ 476 (560)
.+++.||+.|||+++|+.|..++. |++.||++|||+++|+.|
T Consensus 4 ~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 4 QAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 467788888888888888877776 888888888888887754
No 17
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=97.44 E-value=0.00014 Score=54.92 Aligned_cols=43 Identities=28% Similarity=0.511 Sum_probs=28.8
Q ss_pred HhhhhhhhHhHHHHHHHHHHHHHHHHH---HHHHHHhhccchhhHH
Q psy10328 382 AEKLKRCCIVIQKNVRCFLVRKKYLSI---LKSVATLQRWTRGYLA 424 (560)
Q Consensus 382 ~~~l~~aa~~IQ~~~Rg~l~R~~~~~~---~~~~~~iQ~~~R~~~~ 424 (560)
++.+...++.+|+.+|||++|+.|.++ +.++..||+.+|+++.
T Consensus 2 d~~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~ 47 (64)
T 1wdc_A 2 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLV 47 (64)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456677888999999999999988876 3333344444444443
No 18
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=97.43 E-value=0.00044 Score=52.15 Aligned_cols=44 Identities=27% Similarity=0.543 Sum_probs=25.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q psy10328 458 ALVLGLQCAARGMLVRREVRRVRENR-AALRIQTRVRGFLARRNY 501 (560)
Q Consensus 458 ~aai~iQ~~~R~~~~Rr~~~~~~~~~-aa~~IQ~~~R~~~~Rr~~ 501 (560)
..++.+|+.+||+++|+.+.++.... |+..||..+|+|+.++.+
T Consensus 7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w 51 (64)
T 1wdc_A 7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 51 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 45566666666666666665554333 334666666666665543
No 19
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=97.38 E-value=0.00039 Score=52.24 Aligned_cols=44 Identities=36% Similarity=0.566 Sum_probs=26.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q psy10328 458 ALVLGLQCAARGMLVRREVRRVRENR-AALRIQTRVRGFLARRNY 501 (560)
Q Consensus 458 ~aai~iQ~~~R~~~~Rr~~~~~~~~~-aa~~IQ~~~R~~~~Rr~~ 501 (560)
..++.+|+.+||+++|+.+.++.... |+..||..+|+|+.++.+
T Consensus 5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w 49 (63)
T 2bl0_A 5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW 49 (63)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 45566666666666666666554333 444677777776665543
No 20
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=97.32 E-value=0.00045 Score=81.88 Aligned_cols=43 Identities=23% Similarity=0.458 Sum_probs=20.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q psy10328 458 ALVLGLQCAARGMLVRREVRRVRE-NRAALRIQTRVRGFLARRN 500 (560)
Q Consensus 458 ~aai~iQ~~~R~~~~Rr~~~~~~~-~~aa~~IQ~~~R~~~~Rr~ 500 (560)
..++.||++|||+++|+.|.+++. ..|++.||+.||+|+.++.
T Consensus 793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~ 836 (1184)
T 1i84_S 793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH 836 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344455555555555555444432 2344455555555555443
No 21
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=97.19 E-value=0.0004 Score=52.20 Aligned_cols=40 Identities=25% Similarity=0.333 Sum_probs=25.7
Q ss_pred hhhhhHhHHHHHHHHHHHHHHHHH---HHHHHHhhccchhhHH
Q psy10328 385 LKRCCIVIQKNVRCFLVRKKYLSI---LKSVATLQRWTRGYLA 424 (560)
Q Consensus 385 l~~aa~~IQ~~~Rg~l~R~~~~~~---~~~~~~iQ~~~R~~~~ 424 (560)
+...++.+|+.+|||++|+.|.++ +.++..||+.+|+++.
T Consensus 3 l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~ 45 (63)
T 2bl0_A 3 IGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLE 45 (63)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456678888888888888888776 3333344444444433
No 22
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=96.87 E-value=0.0016 Score=73.58 Aligned_cols=43 Identities=26% Similarity=0.574 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhHHHHHHHH
Q psy10328 483 RAALRIQTRVRGFLARRNYEAT---RAKIVICQASIRRFLAKKRFK 525 (560)
Q Consensus 483 ~aa~~IQ~~~R~~~~Rr~~~~~---~~a~i~iQ~~~R~~~aR~~~~ 525 (560)
..++.||++||||++|+.|.+. +.|++.||+.||++++|+.+.
T Consensus 780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~ 825 (837)
T 1kk8_A 780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ 825 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchH
Confidence 4455666666666666666554 455566666666666655543
No 23
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=96.72 E-value=0.029 Score=48.83 Aligned_cols=65 Identities=12% Similarity=0.179 Sum_probs=38.1
Q ss_pred HHhhHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10328 443 AVRAFIRRRQYLRLRALVLGLQCAARGMLVRREVRRVRENRAALRIQTRVRGFLARRNYEATRAKIVICQASI 515 (560)
Q Consensus 443 ~~R~~~~Rr~~~~~r~aai~iQ~~~R~~~~Rr~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~~~a~i~iQ~~~ 515 (560)
....|+.+.++.+..-++...=..-..... +..++++||+.+|||++|+.++.......++-+..
T Consensus 14 kV~~WLi~sRWrK~q~~~lsvIKLknKI~y--------R~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~ 78 (148)
T 3gn4_A 14 RVNHWLICSRWKKVQWCSLSVIKLKNKIKY--------RAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK 78 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 455666666666555433322111111111 23678899999999999998887666655555433
No 24
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=95.83 E-value=0.039 Score=48.08 Aligned_cols=66 Identities=12% Similarity=0.221 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhhhcchhhhHHhHHHhhHHHHHHHHHHhhhhhhHHH
Q psy10328 392 IQKNVRCFLVRKKYLSILKSVATLQRWTRGYLARRLVLHMRRTRAAVRIQSAVRAFIRRRQYLRLRALVLGLQC 465 (560)
Q Consensus 392 IQ~~~Rg~l~R~~~~~~~~~~~~iQ~~~R~~~~r~~~~~~~~~~aa~~IQ~~~R~~~~Rr~~~~~r~aai~iQ~ 465 (560)
+-+.+..|+.+.+|++...++..+=..-.... .+..+++.||+.+|||++|+++...-.+...+-+
T Consensus 11 Lv~kV~~WLi~sRWrK~q~~~lsvIKLknKI~--------yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~ 76 (148)
T 3gn4_A 11 LVKRVNHWLICSRWKKVQWCSLSVIKLKNKIK--------YRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGT 76 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 33456789999999998877665543322222 2356889999999999999998776555544443
No 25
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=95.33 E-value=0.0016 Score=75.17 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=40.4
Q ss_pred hhHHHHHHHHHhhhhhhhHhHHHHHHHHHHHHHHHH----HHHHHHHhhccchhhHHHHhh
Q psy10328 372 GQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLS----ILKSVATLQRWTRGYLARRLV 428 (560)
Q Consensus 372 ~~~~~Le~~r~~~l~~aa~~IQ~~~Rg~l~R~~~~~----~~~~~~~iQ~~~R~~~~r~~~ 428 (560)
.+++++.+.+..++..+++.||..+|++..|+...- +-.++.-+++.+|++..++++
T Consensus 783 ~~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~~~~w~~l~~~v~pll~~~~~~~~~r~~ 843 (1052)
T 4anj_A 783 RVNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEAVSKGEELFTGVVPILVELDGDVNGHKF 843 (1052)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCEEEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhhhhhHHHHHHHHHhhhh
Confidence 468888888888899999999998888765553322 223456677777777766543
No 26
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=94.91 E-value=0.025 Score=35.39 Aligned_cols=20 Identities=35% Similarity=0.439 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy10328 481 ENRAALRIQTRVRGFLARRN 500 (560)
Q Consensus 481 ~~~aa~~IQ~~~R~~~~Rr~ 500 (560)
++.+|+.||.+||+|+.++.
T Consensus 5 Ee~aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 5 EEVSAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 56788888888888888754
No 27
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=94.78 E-value=0.011 Score=35.81 Aligned_cols=19 Identities=26% Similarity=0.434 Sum_probs=15.6
Q ss_pred cchhhhHHhHHHhhHHHHH
Q psy10328 433 RTRAAVRIQSAVRAFIRRR 451 (560)
Q Consensus 433 ~~~aa~~IQ~~~R~~~~Rr 451 (560)
++.||++||++||+|+.++
T Consensus 5 Ee~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 5 EEVSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4568899999999998875
No 28
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=94.74 E-value=0.02 Score=34.74 Aligned_cols=19 Identities=32% Similarity=0.482 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy10328 481 ENRAALRIQTRVRGFLARR 499 (560)
Q Consensus 481 ~~~aa~~IQ~~~R~~~~Rr 499 (560)
++.||+.||.+||+|+.++
T Consensus 5 Ee~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 5 EEVSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 5678888888888888764
No 29
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=94.64 E-value=0.015 Score=36.37 Aligned_cols=20 Identities=30% Similarity=0.358 Sum_probs=16.2
Q ss_pred cchhhhHHhHHHhhHHHHHH
Q psy10328 433 RTRAAVRIQSAVRAFIRRRQ 452 (560)
Q Consensus 433 ~~~aa~~IQ~~~R~~~~Rr~ 452 (560)
++.+|++||.+||+|+.++.
T Consensus 5 Ee~aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 5 EEVSAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 45688999999999988764
No 30
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=89.12 E-value=4.1 Score=47.04 Aligned_cols=16 Identities=50% Similarity=0.596 Sum_probs=14.8
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||+|++||+++||+
T Consensus 678 ~~GvlE~iri~r~Gfp 693 (1010)
T 1g8x_A 678 CNGVLEGIRITRKGFP 693 (1010)
T ss_dssp HSSHHHHHHHHTTSCC
T ss_pred cCccHHHHHHHHhCCc
Confidence 6799999999999986
No 31
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=74.92 E-value=2.7 Score=47.09 Aligned_cols=29 Identities=28% Similarity=0.558 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy10328 502 EATRAKIVICQASIRRFLAKKRFKKMKKE 530 (560)
Q Consensus 502 ~~~~~a~i~iQ~~~R~~~aR~~~~~lk~~ 530 (560)
..+..+++.||+.||+|++|+++.+++.+
T Consensus 765 ~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a 793 (795)
T 1w7j_A 765 DKLRAACIRIQKTIRGWLMRKKYMRMRRG 793 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445677777777777777777776543
No 32
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=68.56 E-value=5.6 Score=35.44 Aligned_cols=19 Identities=32% Similarity=0.384 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy10328 483 RAALRIQTRVRGFLARRNY 501 (560)
Q Consensus 483 ~aa~~IQ~~~R~~~~Rr~~ 501 (560)
.||..||.+||.|+.|+.+
T Consensus 131 ~aA~~IQra~R~~~~r~~~ 149 (168)
T 4dck_A 131 VSAMVIQRAFRRHLLQRSL 149 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 4555666666655555443
No 33
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=61.62 E-value=4.7 Score=35.96 Aligned_cols=22 Identities=27% Similarity=0.294 Sum_probs=15.6
Q ss_pred cchhhhHHhHHHhhHHHHHHHH
Q psy10328 433 RTRAAVRIQSAVRAFIRRRQYL 454 (560)
Q Consensus 433 ~~~aa~~IQ~~~R~~~~Rr~~~ 454 (560)
+..||.+||.+||.|+.|+.+.
T Consensus 129 e~~aA~~IQra~R~~~~r~~~~ 150 (168)
T 4dck_A 129 EEVSAMVIQRAFRRHLLQRSLK 150 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccc
Confidence 3457888888888887766543
No 34
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=56.24 E-value=5.8 Score=45.74 Aligned_cols=15 Identities=13% Similarity=0.020 Sum_probs=8.9
Q ss_pred chhhhhhhhhHHHHH
Q psy10328 48 FEQFCINYANEKLQQ 62 (560)
Q Consensus 48 fEqlciNy~nErLq~ 62 (560)
|-|||-....|....
T Consensus 259 FYqll~g~~~~~~~~ 273 (995)
T 2ycu_A 259 FYQLLGGAGEQLKAD 273 (995)
T ss_dssp HHHHHHHCCHHHHHH
T ss_pred HHHHHcCCCHHHHHH
Confidence 667777665554443
No 35
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=51.82 E-value=3.5 Score=45.94 Aligned_cols=16 Identities=50% Similarity=0.596 Sum_probs=14.7
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||||++||+++||+
T Consensus 678 ~~GvlE~iri~r~Gyp 693 (770)
T 1w9i_A 678 CNGVLEGIRITRKGFP 693 (770)
T ss_dssp HSSHHHHHHHTTSSCC
T ss_pred ccchHHHHHHHHhcCc
Confidence 6799999999999985
No 36
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=51.44 E-value=3.2 Score=46.45 Aligned_cols=16 Identities=50% Similarity=0.567 Sum_probs=14.7
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||||++||+++||+
T Consensus 695 ~~GvlE~iri~r~Gyp 710 (783)
T 4db1_A 695 CNGVLEGIRICRKGFP 710 (783)
T ss_dssp HSSHHHHHHHHHTSCC
T ss_pred ccChHhheeehhcCCC
Confidence 6899999999999985
No 37
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=47.76 E-value=4.1 Score=45.60 Aligned_cols=16 Identities=13% Similarity=0.318 Sum_probs=14.8
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||+|++||+++||+
T Consensus 687 ~~GvlE~iri~r~Gyp 702 (784)
T 2v26_A 687 CSGMVSVLDLMQGGFP 702 (784)
T ss_dssp HTTHHHHHHHHTSCCS
T ss_pred ccccHHHHHHHHhcCC
Confidence 6799999999999985
No 38
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=44.71 E-value=4.2 Score=44.87 Aligned_cols=16 Identities=38% Similarity=0.563 Sum_probs=14.0
Q ss_pred hcccchhhhccccccc
Q psy10328 270 ACGVLETIRISAAGQF 285 (560)
Q Consensus 270 ~~G~~e~~ri~~~g~~ 285 (560)
|+||+|++||+++||+
T Consensus 610 ~~GvlE~iri~r~Gyp 625 (697)
T 1lkx_A 610 YLGLLENVRVRRAGFA 625 (697)
T ss_dssp HHTSHHHHHHHHHSCS
T ss_pred ccccHHHHHHHhcCCC
Confidence 5799999999999975
No 39
>2iqc_A Protein FACF, fanconi anemia group F protein; heat-like repeat, DNA-damage, complex subunit, protein binding; 2.40A {Homo sapiens}
Probab=37.10 E-value=18 Score=32.60 Aligned_cols=44 Identities=14% Similarity=0.255 Sum_probs=33.9
Q ss_pred CCcccHHHHHHHHHhhhcCccccccccCchHHHHHHHhhhcccCccccccc
Q psy10328 313 PSRWTYGEFYNRYRVLCGNLKQYNTAVHSMNEIGEHIVTSSIADCDKYKFG 363 (560)
Q Consensus 313 p~r~~~~eF~~ry~~L~~~~~~~~~~~~~~k~~~~~ll~~l~~~~~~~~iG 363 (560)
|..+++.||+.||+.|+... .+.|+.+...|+.+.....+|.+-
T Consensus 152 ~~~lpweeL~~Rf~sLcqa~-------p~Lkeev~taLkslKaqDGDFeVp 195 (210)
T 2iqc_A 152 SQDVPWEELHNRFQSLCQAP-------PPLKDKVLTALETCKAQDGDFEVP 195 (210)
T ss_dssp TTCCCHHHHHHHHHHHHTSC-------HHHHHHHHHHHHHHHHHTTCCCST
T ss_pred CcCCCHHHHHHHHHHHhcCC-------hhhHHHHHHHHHHHHHhcCCcCCC
Confidence 34599999999999999976 567777877777776555666653
No 40
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=33.07 E-value=20 Score=20.60 Aligned_cols=15 Identities=20% Similarity=0.073 Sum_probs=10.1
Q ss_pred hhhHHhHHHhhHHHH
Q psy10328 436 AAVRIQSAVRAFIRR 450 (560)
Q Consensus 436 aa~~IQ~~~R~~~~R 450 (560)
|+..||-.||.+..|
T Consensus 8 A~llI~d~~r~~k~r 22 (23)
T 3dvk_B 8 AAMMIMDYYKQSKVK 22 (26)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcc
Confidence 566777777776554
No 41
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=30.93 E-value=1.6e+02 Score=22.08 Aligned_cols=37 Identities=5% Similarity=0.206 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy10328 522 KRFKKMKKEARSVEHVKKLNKGLENKIISMQQRIGDL 558 (560)
Q Consensus 522 ~~~~~lk~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~ 558 (560)
+....++.....+..+.+.-.+.++.+.+|+-.|++.
T Consensus 30 ~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 30 EKIEELRQRDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445566666667777777778888899999888765
No 42
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=26.76 E-value=22 Score=25.82 Aligned_cols=12 Identities=50% Similarity=0.800 Sum_probs=10.1
Q ss_pred eecceEEEeccc
Q psy10328 152 HFADDVTYDTAG 163 (560)
Q Consensus 152 H~aG~V~Y~v~g 163 (560)
.|||.|+|..+|
T Consensus 28 kfagtvtytldg 39 (85)
T 2kl8_A 28 KFAGTVTYTLDG 39 (85)
T ss_dssp TTTCEEEEEECS
T ss_pred hhcceEEEEecC
Confidence 369999999876
Done!