RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1033
(67 letters)
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1,
saccharide binding domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 302
Score = 47.5 bits (112), Expect = 7e-09
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 1 PNAPLYPAVTDQGYFKSLNANWSVNYYLYKGIPANKLLLGLPTYG 45
N+PLY + D G LN + ++Y+ G + KL++G P
Sbjct: 203 ENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKLIVGFPADN 247
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 327
Score = 46.7 bits (110), Expect = 1e-08
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 1 PNAPLYPAVTDQGYFKSLNANWSVNYYLYKGIPANKLLLGLPT 43
+AP+Y + LNA++ V Y+L +G P+NK+ LG+ T
Sbjct: 235 YSAPIYHPDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGVAT 277
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus
(Coccidioides immitis) [TaxId: 5501]}
Length = 330
Score = 46.0 bits (108), Expect = 2e-08
Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 1 PNAPLYPAVTDQGYFKSLNANWSVNYYLYKGIPANKLLLGLPTYGHSYTLVNPD 54
+ ++P+ T +++ +V Y+ G+PANK++LG+P +
Sbjct: 216 HMSNVFPSTTKPESTP-FSSDKAVKDYIKAGVPANKIVLGMPLDTVKIAGKKAE 268
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain
{Serratia marcescens [TaxId: 615]}
Length = 358
Score = 45.9 bits (108), Expect = 3e-08
Identities = 8/50 (16%), Positives = 14/50 (28%), Gaps = 2/50 (4%)
Query: 1 PNAPLYPAVTDQGYFKSLNANWSVNYYLYKGIPANKLLLGLPTYGHSYTL 50
L + VN L +G+ K+++G S
Sbjct: 271 HQTALNAPAWKPD--TAYTTVNGVNALLAQGVKPGKIVVGTAMDARSVQA 318
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 297
Score = 43.6 bits (102), Expect = 2e-07
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 2 NAPLYPAVTDQGYFKSLNANWSVNYYLYKGIPANKLLLGLPT 43
N+PLY + G SLN + +V +L KG PA+KL+LG+PT
Sbjct: 204 NSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPT 245
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus
fumigatus [TaxId: 5085]}
Length = 333
Score = 42.8 bits (100), Expect = 4e-07
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 1 PNAPLYPAVTDQGYFKSLNANWSVNYYLYKGIPANKLLLGLPTYGHSYTLVNPD 54
A +Y ++ N +++ Y G+PANK++LG+P +
Sbjct: 219 HQANVYNDTSNPLSTP-FNTQTALDLYRAGGVPANKIVLGMPLDNPQVANLKSG 271
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B
{Arthrobacter sp., tad20 [TaxId: 1667]}
Length = 374
Score = 41.8 bits (97), Expect = 8e-07
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 1 PNAPLYPAVTDQGYF-KSLNANWSVNYYLYKGIPANKLLLGLPTYG 45
A LY D K +A+ +V YL GI +L LGL
Sbjct: 275 HQANLYDDPADPRAPSKKFSADKAVKKYLAAGIDPKQLGLGLAADN 320
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein
(SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]}
Length = 292
Score = 40.6 bits (94), Expect = 2e-06
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 1 PNAPLYPAVTDQGYFKSLNANWSVNYYLYKGIPANKLLLGLPTY 44
++PL+ + + NA+++V+Y L G PANKL++G+PT
Sbjct: 197 HHSPLFRG-NEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTD 239
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus
circulans [TaxId: 1397]}
Length = 347
Score = 35.2 bits (80), Expect = 2e-04
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 1 PNAPLYP----AVTDQGYFKSLNANWSVNYYLYKGIPANKLLLGLP 42
NAPL + + N +L G+PA KL+LG+P
Sbjct: 259 HNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGVPAAKLVLGVP 304
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 70
Score = 28.7 bits (64), Expect = 0.013
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 44 YGHSYTLVNPDSTDYGMPASEKGP 67
YGH++ L +P T G P GP
Sbjct: 1 YGHTFILSDPSKTGIGAPTISTGP 24
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 68
Score = 27.9 bits (62), Expect = 0.028
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 44 YGHSYTLVNPDSTDYGMPASEKGP 67
YG S+TL + T G PA+ G
Sbjct: 1 YGRSFTLASSSDTRVGAPATGSGT 24
>d1vi6a_ c.23.15.1 (A:) Ribosomal protein S2 {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 193
Score = 26.1 bits (57), Expect = 0.27
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 39 LGLPTYGHSYTLVNPDSTDYGMPASEKGP 67
+G+P + + D +P + KG
Sbjct: 132 VGIPVVALCDSNNSSADVDLVIPTNNKGR 160
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber
tree (Hevea brasiliensis) [TaxId: 3981]}
Length = 273
Score = 25.9 bits (56), Expect = 0.39
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 12 QGYFKSLNANWSVNYYLYKGIPANKLLLGLPTYG 45
Q ++N + I A K+ LGLP
Sbjct: 189 QYSSGNINNIINSWNRWTTSINAGKIFLGLPAAP 222
>d2gy9b1 c.23.15.1 (B:8-225) Ribosomal protein S2 {Escherichia coli
[TaxId: 562]}
Length = 218
Score = 25.1 bits (54), Expect = 0.75
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 39 LGLPTYGHSYTLVNPDSTDYGMPASEKGP 67
LG+P + T +PD D+ +P ++
Sbjct: 171 LGIPVFAIVDTNSDPDGVDFVIPGNDDAI 199
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40,
MGP-40) {Sheep (Ovis aries) [TaxId: 9940]}
Length = 68
Score = 24.0 bits (52), Expect = 0.82
Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 44 YGHSYTLVNPDSTDYGMPASEKGP 67
+G S+TL + TD G P S G
Sbjct: 1 FGRSFTLASSK-TDVGAPVSGPGI 23
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans
[TaxId: 1397]}
Length = 72
Score = 23.4 bits (50), Expect = 1.8
Identities = 2/24 (8%), Positives = 4/24 (16%)
Query: 44 YGHSYTLVNPDSTDYGMPASEKGP 67
YG + +
Sbjct: 1 YGRGWDGCAQAGNGQYQTCTGGSS 24
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase
{Flavobacterium meningosepticum, endoglycosidase F3
[TaxId: 238]}
Length = 282
Score = 23.3 bits (49), Expect = 2.9
Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 3 APLYPAVTDQGYFKSLNANWSVNYY--LYKGIPANKLLLGLPTYGHSYTLVNPDSTDYGM 60
+ + Q Y +++ + Y IPA+K++ G G + + + +
Sbjct: 195 RNNFNYIQLQSYGANVSRTQLMMNYATGTNKIPASKMVFGAYAEGGTNQANDVEVAKWTP 254
Query: 61 PASEKG 66
KG
Sbjct: 255 TQGAKG 260
Score = 22.1 bits (46), Expect = 7.3
Identities = 7/48 (14%), Positives = 14/48 (29%), Gaps = 5/48 (10%)
Query: 1 PNAPLYPAVTDQGYFKSLNANWSVNYYLYKGIPANKLLLGLPTYGHSY 48
P + + +G N + K P G+ Y ++
Sbjct: 227 PASKMVFGAYAEGGTNQANDVE-----VAKWTPTQGAKGGMMIYTYNS 269
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat
(Triticum aestivum) [TaxId: 4565]}
Length = 274
Score = 23.2 bits (49), Expect = 2.9
Identities = 9/56 (16%), Positives = 17/56 (30%)
Query: 11 DQGYFKSLNANWSVNYYLYKGIPANKLLLGLPTYGHSYTLVNPDSTDYGMPASEKG 66
+ PA + +GL S+ V+P + YG+ +
Sbjct: 191 SDKWCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQK 246
>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA
synthase) {Amycolatopsis mediterranei [TaxId: 33910]}
Length = 384
Score = 22.4 bits (46), Expect = 6.5
Identities = 7/48 (14%), Positives = 14/48 (29%), Gaps = 4/48 (8%)
Query: 1 PNAPLYPAVTDQGYFKSLNANWSVNYYLYKGIP-ANKL---LLGLPTY 44
P + A+ F L A + + P + + + L
Sbjct: 314 PAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHR 361
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.312 0.136 0.427
Gapped
Lambda K H
0.267 0.0650 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 252,555
Number of extensions: 8997
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 24
Length of query: 67
Length of database: 2,407,596
Length adjustment: 36
Effective length of query: 31
Effective length of database: 1,913,316
Effective search space: 59312796
Effective search space used: 59312796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 47 (22.0 bits)