Query psy10330
Match_columns 109
No_of_seqs 128 out of 1345
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 15:15:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10330.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10330hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kk8_A Myosin heavy chain, str 99.8 1.3E-19 4.5E-24 146.0 9.8 104 6-109 708-821 (837)
2 2dfs_A Myosin-5A; myosin-V, in 99.8 2.3E-19 7.8E-24 147.7 9.5 104 6-109 699-807 (1080)
3 1i84_S Smooth muscle myosin he 99.7 5.3E-17 1.8E-21 134.8 8.7 104 6-109 721-834 (1184)
4 1w7j_A Myosin VA; motor protei 99.6 5.1E-16 1.8E-20 124.7 7.9 91 6-96 699-794 (795)
5 4anj_A Unconventional myosin-V 99.6 5.4E-16 1.9E-20 127.3 7.6 102 6-108 706-812 (1052)
6 2ix7_C Myosin-5A; contractIle 99.3 3.1E-12 1E-16 71.9 5.4 42 68-109 3-44 (58)
7 1n2d_C IQ2 and IQ3 motifs from 99.2 2.9E-11 9.8E-16 65.3 5.3 40 70-109 3-44 (48)
8 1g8x_A Myosin II heavy chain f 99.1 1.8E-10 6.1E-15 94.7 9.8 101 6-106 693-808 (1010)
9 2ycu_A Non muscle myosin 2C, a 99.1 1.9E-12 6.5E-17 106.2 -5.4 103 6-108 688-802 (995)
10 1wdc_A Scallop myosin; calcium 98.7 1.3E-08 4.3E-13 58.0 4.7 43 66-108 2-47 (64)
11 2v26_A Myosin VI; calmodulin-b 98.7 5.5E-09 1.9E-13 84.1 3.4 77 6-83 702-783 (784)
12 2bl0_A Major plasmodial myosin 98.6 6.6E-08 2.3E-12 54.8 4.9 41 68-108 2-45 (63)
13 4db1_A Myosin-7; S1DC, cardiac 98.5 2E-08 6.9E-13 80.8 0.2 65 6-70 710-782 (783)
14 1w9i_A Myosin II heavy chain; 98.4 1.3E-08 4.4E-13 81.8 -2.2 69 6-74 693-767 (770)
15 2dfs_A Myosin-5A; myosin-V, in 98.4 7.9E-07 2.7E-11 73.8 7.1 41 69-109 815-855 (1080)
16 1lkx_A Myosin IE heavy chain; 98.3 4.9E-08 1.7E-12 77.8 -1.9 46 24-69 650-696 (697)
17 2ix7_C Myosin-5A; contractIle 98.1 1.1E-05 3.7E-10 44.7 5.8 43 52-94 10-52 (58)
18 1n2d_C IQ2 and IQ3 motifs from 97.9 2.8E-05 9.6E-10 41.3 5.0 37 53-89 9-47 (48)
19 2l53_B CAM, voltage-gated sodi 95.9 0.0081 2.8E-07 29.0 2.7 19 70-88 6-24 (31)
20 2kxw_B Sodium channel protein 95.7 0.0067 2.3E-07 28.4 2.0 18 70-87 6-23 (27)
21 3gn4_A Myosin-VI; unconvention 94.4 0.16 5.5E-06 33.0 6.4 32 69-100 44-75 (148)
22 3gn4_A Myosin-VI; unconvention 93.7 0.1 3.6E-06 33.9 4.5 17 93-109 45-61 (148)
23 1wdc_A Scallop myosin; calcium 92.0 0.21 7.2E-06 27.5 3.7 38 53-90 12-52 (64)
24 1kk8_A Myosin heavy chain, str 91.7 0.19 6.4E-06 41.0 4.4 42 51-92 783-827 (837)
25 2bl0_A Major plasmodial myosin 91.6 0.32 1.1E-05 26.7 4.1 38 53-90 10-50 (63)
26 4dck_A Sodium channel protein 82.7 2.4 8.3E-05 28.0 4.8 21 71-91 131-151 (168)
27 1i84_S Smooth muscle myosin he 76.9 2.2 7.6E-05 35.9 3.9 40 51-90 796-838 (1184)
28 1w7j_A Myosin VA; motor protei 67.4 4.5 0.00015 32.8 3.5 20 90-109 765-784 (795)
29 3dvk_B Voltage-dependent R-typ 44.5 18 0.00061 15.9 1.9 10 97-106 10-19 (23)
30 3dve_B Voltage-dependent N-typ 35.9 29 0.001 15.1 1.9 13 95-107 7-19 (23)
31 2f3y_B Voltage-dependent L-typ 35.5 34 0.0012 15.3 2.3 16 73-88 5-20 (26)
32 4anj_A Unconventional myosin-V 26.2 1.3E+02 0.0045 25.3 5.7 33 55-87 782-814 (1052)
33 2lma_A THP5 peptide; CD4+, imm 25.5 28 0.00095 15.2 0.9 9 1-9 13-21 (26)
34 2be6_D Voltage-dependent L-typ 25.1 68 0.0023 15.6 2.9 17 72-88 13-29 (37)
35 3bxl_B CAM, voltage-dependent 20.6 73 0.0025 14.2 2.4 16 72-87 4-19 (26)
No 1
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=99.80 E-value=1.3e-19 Score=146.02 Aligned_cols=104 Identities=26% Similarity=0.430 Sum_probs=91.6
Q ss_pred hhhhhhhhhHHHHHHHh-------ccchHHHHHHHhhhhCCCcchhhhcceEEEEehhHHHHHHHHHHHHhHHHHHHHHH
Q psy10330 6 ANEKLEGENLQLIEKIQ-------SIADEMETSKINIEKDHDCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQK 78 (109)
Q Consensus 6 ~~~~~~~~~~~~~e~~~-------~~~~~~~~~~il~~~~~~~~~~~~G~tkvF~k~~~~~~Le~~r~~~l~~~a~~IQ~ 78 (109)
|.++..+++.+....+. ..+++..|+.||..+++++++|++|+||||+|.+++..||..|+..+..+++.||+
T Consensus 708 p~R~~f~eF~~RY~~L~~~~~~~~~~d~k~~~~~ll~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQa 787 (837)
T 1kk8_A 708 PSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQA 787 (837)
T ss_dssp CEEEEHHHHHHHHGGGSGGGCCC---CHHHHHHHHHHHHTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHcCCCccceeecCEEEEehhhHHHHHHHHHHHHHHhHHHHHHH
Confidence 55666666666665442 24789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHhhhcC
Q psy10330 79 NVRCFLVRKKYLSI---LKSVATLQRWTRGYLAR 109 (109)
Q Consensus 79 ~~Rg~~~Rr~~~~~---r~a~~~iQ~~~R~~~aR 109 (109)
+||||++|++|.++ +.|+++||++||+|++|
T Consensus 788 ~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~ 821 (837)
T 1kk8_A 788 HIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVL 821 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 68999999999999864
No 2
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.79 E-value=2.3e-19 Score=147.74 Aligned_cols=104 Identities=42% Similarity=0.638 Sum_probs=90.9
Q ss_pred hhhhhhhhhHHHHHHHhcc-----chHHHHHHHhhhhCCCcchhhhcceEEEEehhHHHHHHHHHHHHhHHHHHHHHHHH
Q psy10330 6 ANEKLEGENLQLIEKIQSI-----ADEMETSKINIEKDHDCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNV 80 (109)
Q Consensus 6 ~~~~~~~~~~~~~e~~~~~-----~~~~~~~~il~~~~~~~~~~~~G~tkvF~k~~~~~~Le~~r~~~l~~~a~~IQ~~~ 80 (109)
|.++..+++.+....+... +++..|+.||..++.++++|++|+||||++.+.+..||+.|...++.+++.||++|
T Consensus 699 p~R~~~~eF~~RY~~L~~~~~~~~d~k~~~~~il~~~~~~~~~~~~G~TKVF~r~g~l~~LE~~R~~~l~~aa~~IQa~~ 778 (1080)
T 2dfs_A 699 PSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTI 778 (1080)
T ss_dssp CEEEEHHHHHHHHTTTSCGGGCCSSHHHHHHHHHTTTSCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHCCccCCCCChHHHHHHHHHHhcCChhhheeccccchhccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5556666666655544221 67999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy10330 81 RCFLVRKKYLSILKSVATLQRWTRGYLAR 109 (109)
Q Consensus 81 Rg~~~Rr~~~~~r~a~~~iQ~~~R~~~aR 109 (109)
|||.+|++|.+++.+++.||++|||+++|
T Consensus 779 Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR 807 (1080)
T 2dfs_A 779 RGWLMRKKYMRMRRAAITIQRYVRGHQAR 807 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998764
No 3
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.69 E-value=5.3e-17 Score=134.75 Aligned_cols=104 Identities=26% Similarity=0.337 Sum_probs=89.2
Q ss_pred hhhhhhhhhHHHHHHHh-------ccchHHHHHHHhhhhCCCcchhhhcceEEEEehhHHHHHHHHHHHHhHHHHHHHHH
Q psy10330 6 ANEKLEGENLQLIEKIQ-------SIADEMETSKINIEKDHDCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQK 78 (109)
Q Consensus 6 ~~~~~~~~~~~~~e~~~-------~~~~~~~~~~il~~~~~~~~~~~~G~tkvF~k~~~~~~Le~~r~~~l~~~a~~IQ~ 78 (109)
|.++.+.++.+....+. ..+++..|..||..++++++.|++|+||||++.+++..||..|...+..+++.||+
T Consensus 721 p~R~~~~~F~~ry~~L~~~~~~~~~~d~k~~~~~lL~~l~l~~~~~~iG~TKVF~r~g~l~~LE~~r~~~l~~~~~~iQ~ 800 (1184)
T 1i84_S 721 PNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQA 800 (1184)
T ss_dssp CEEEEHHHHHHHTTTTCTTTSCSSCCCHHHHHHHHHHTTTCCTTTCCBCSSEEEECTTHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhccccCCcCCCCHHHHHHHHHHHcCCCccceeEcCeEEEEechHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555556555544332 23678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHhhhcC
Q psy10330 79 NVRCFLVRKKYLSIL---KSVATLQRWTRGYLAR 109 (109)
Q Consensus 79 ~~Rg~~~Rr~~~~~r---~a~~~iQ~~~R~~~aR 109 (109)
+||||++|+.|.+++ .+++.||++||+|+++
T Consensus 801 ~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~ 834 (1184)
T 1i84_S 801 QCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNV 834 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999874 7999999999999753
No 4
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=99.63 E-value=5.1e-16 Score=124.69 Aligned_cols=91 Identities=41% Similarity=0.604 Sum_probs=78.1
Q ss_pred hhhhhhhhhHHHHHHHhcc-----chHHHHHHHhhhhCCCcchhhhcceEEEEehhHHHHHHHHHHHHhHHHHHHHHHHH
Q psy10330 6 ANEKLEGENLQLIEKIQSI-----ADEMETSKINIEKDHDCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNV 80 (109)
Q Consensus 6 ~~~~~~~~~~~~~e~~~~~-----~~~~~~~~il~~~~~~~~~~~~G~tkvF~k~~~~~~Le~~r~~~l~~~a~~IQ~~~ 80 (109)
|.++..+++.+....+... +++..|+.||..++.++++|++|+||||+|.+++..||..|+..+..+++.||++|
T Consensus 699 p~R~~f~eF~~RY~~L~~~~~~~~d~k~~~~~il~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQ~~~ 778 (795)
T 1w7j_A 699 PSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTI 778 (795)
T ss_dssp CEEEEHHHHHHHHGGGSCGGGCCSCHHHHHHHHHHHHCCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccHHHHHHHHHHhCCcccCCCCHHHHHHHHHHHhCCCccceEEcCceEEEchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556666666666544322 67999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy10330 81 RCFLVRKKYLSILKSV 96 (109)
Q Consensus 81 Rg~~~Rr~~~~~r~a~ 96 (109)
|||++|++|.+++.++
T Consensus 779 Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 779 RGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998764
No 5
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=99.62 E-value=5.4e-16 Score=127.32 Aligned_cols=102 Identities=15% Similarity=0.230 Sum_probs=88.1
Q ss_pred hhhhhhhhhHHHHHHH-----hccchHHHHHHHhhhhCCCcchhhhcceEEEEehhHHHHHHHHHHHHhHHHHHHHHHHH
Q psy10330 6 ANEKLEGENLQLIEKI-----QSIADEMETSKINIEKDHDCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNV 80 (109)
Q Consensus 6 ~~~~~~~~~~~~~e~~-----~~~~~~~~~~~il~~~~~~~~~~~~G~tkvF~k~~~~~~Le~~r~~~l~~~a~~IQ~~~ 80 (109)
|.++..+++.+....+ ...+++..|+.||..+++++++|++|+||||+|++++..||+.|...+..+++.||+ +
T Consensus 706 p~R~~f~eF~~RY~~L~~~~~~~~d~k~~~~~iL~~l~l~~~~y~iG~TKVFlr~~~~~~LE~~r~~~~~~~~~~iq~-~ 784 (1052)
T 4anj_A 706 PSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKR-V 784 (1052)
T ss_dssp CEEEEHHHHHHHHHTTSCSSGGGSCHHHHHHHHHHHTSCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHHHHHHHHH-H
T ss_pred CCcCcHHHHHHHHHHhCcccccCCCHHHHHHHHHHHcCcCcccEEecCCEEeeCcCHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 5566666776666544 335789999999999999999999999999999999999999999999988888886 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy10330 81 RCFLVRKKYLSILKSVATLQRWTRGYLA 108 (109)
Q Consensus 81 Rg~~~Rr~~~~~r~a~~~iQ~~~R~~~a 108 (109)
|||++|++|++++.+++.||..+|+...
T Consensus 785 r~~l~r~~~~k~~~~a~~i~~~~r~~~~ 812 (1052)
T 4anj_A 785 NHWLICSRWKKVQWCSLSVIKLKNKIKY 812 (1052)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998877543
No 6
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=99.31 E-value=3.1e-12 Score=71.86 Aligned_cols=42 Identities=50% Similarity=0.918 Sum_probs=39.3
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy10330 68 KLKRCCIVIQKNVRCFLVRKKYLSILKSVATLQRWTRGYLAR 109 (109)
Q Consensus 68 ~l~~~a~~IQ~~~Rg~~~Rr~~~~~r~a~~~iQ~~~R~~~aR 109 (109)
.++.+++.||++||||.+|+.|.+++.+++.||+.|||+++|
T Consensus 3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR 44 (58)
T 2ix7_C 3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQAR 44 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999875
No 7
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=99.20 E-value=2.9e-11 Score=65.33 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhcC
Q psy10330 70 KRCCIVIQKNVRCFLVRKKYLSILK--SVATLQRWTRGYLAR 109 (109)
Q Consensus 70 ~~~a~~IQ~~~Rg~~~Rr~~~~~r~--a~~~iQ~~~R~~~aR 109 (109)
..+++.||++|||+++|+.|...+. +++.||+.|||+.+|
T Consensus 3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~R 44 (48)
T 1n2d_C 3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIR 44 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 5689999999999999999999887 999999999999875
No 8
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.14 E-value=1.8e-10 Score=94.75 Aligned_cols=101 Identities=21% Similarity=0.245 Sum_probs=78.1
Q ss_pred hhhhhhhhhHHHHHHHh------ccchHHHHHHHhhhhCCCcchhhhcceEEEEehhHHHHHHHHHHHHhHHHHHHHHHH
Q psy10330 6 ANEKLEGENLQLIEKIQ------SIADEMETSKINIEKDHDCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKN 79 (109)
Q Consensus 6 ~~~~~~~~~~~~~e~~~------~~~~~~~~~~il~~~~~~~~~~~~G~tkvF~k~~~~~~Le~~r~~~l~~~a~~IQ~~ 79 (109)
|.++..+++.+....+. ..+++..|+.||..+++++++|++|+||||+|.+++..||..|+..+..+++.||-.
T Consensus 693 p~r~~~~~F~~RY~~L~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~~G~tkVF~r~~~l~~LE~~R~~~l~~~~~~iQY~ 772 (1010)
T 1g8x_A 693 PNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRLGSEQTKSDYL 772 (1010)
T ss_dssp CEEEEHHHHHHHHGGGSTTCCTTCSCHHHHHHHHHHHTTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhCCCCCcCCCCHHHHHHHHHHHcCCCccceeehhhhhhhcccchhHHHHHHHHHHHHHHHHHHHH
Confidence 55566666666655443 347899999999999999999999999999999999999999999999999999976
Q ss_pred HHHHHHHHHHHHHH---------HHHHHHHHHHHhh
Q psy10330 80 VRCFLVRKKYLSIL---------KSVATLQRWTRGY 106 (109)
Q Consensus 80 ~Rg~~~Rr~~~~~r---------~a~~~iQ~~~R~~ 106 (109)
.++...+..+.... .++..+|+.++++
T Consensus 773 ~~a~~L~~WIr~kqa~l~~r~~~~sl~~IQ~ll~~f 808 (1010)
T 1g8x_A 773 KRANELVQWINDKQASLESRDFGDSIESVQSFMNAH 808 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHH
Confidence 66555444333321 2467788887764
No 9
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.06 E-value=1.9e-12 Score=106.21 Aligned_cols=103 Identities=21% Similarity=0.224 Sum_probs=83.4
Q ss_pred hhhhhhhhhHHHHHHHh-------ccchHHHHHHHhhhhCCCcchhhhcceEEEEehhHHHHHHHHHHHHhHHH-----H
Q psy10330 6 ANEKLEGENLQLIEKIQ-------SIADEMETSKINIEKDHDCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRC-----C 73 (109)
Q Consensus 6 ~~~~~~~~~~~~~e~~~-------~~~~~~~~~~il~~~~~~~~~~~~G~tkvF~k~~~~~~Le~~r~~~l~~~-----a 73 (109)
|.++..+++.+....+. ..+++..|+.||..+++++++|++|+||||++.+++..||..|+..+... +
T Consensus 688 p~r~~~~~F~~RY~~L~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~~G~tkVF~r~~~~~~LE~~R~~~l~~~eYe~~a 767 (995)
T 2ycu_A 688 PNRILFQEFRQRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERASEQTKSDYLKRA 767 (995)
T ss_dssp CEEEEHHHHHHHHGGGSTTTSCSCCCCSCCSCCCSCCCSSEEESSEEEESSCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccHHHHHHHHHHhCcccccccCCCHHHHHHHHHHHcCCChhheeecceEEEEecchhhhHHHHHHHHhhhhhHHHHH
Confidence 55666677766666552 23678899999999999999999999999999999999999999887643 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy10330 74 IVIQKNVRCFLVRKKYLSILKSVATLQRWTRGYLA 108 (109)
Q Consensus 74 ~~IQ~~~Rg~~~Rr~~~~~r~a~~~iQ~~~R~~~a 108 (109)
..++.++++...+..+.+.+.++..||+.|+++.+
T Consensus 768 ~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~ 802 (995)
T 2ycu_A 768 NELVQWINDKQASLESRDFGDSIESVQSFMNAHKE 802 (995)
T ss_dssp HHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 55667777777777788888999999999998754
No 10
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=98.75 E-value=1.3e-08 Score=58.01 Aligned_cols=43 Identities=28% Similarity=0.511 Sum_probs=39.2
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhc
Q psy10330 66 AEKLKRCCIVIQKNVRCFLVRKKYLSI---LKSVATLQRWTRGYLA 108 (109)
Q Consensus 66 ~~~l~~~a~~IQ~~~Rg~~~Rr~~~~~---r~a~~~iQ~~~R~~~a 108 (109)
++++...++.+|+.+|||++|+.|.+. +.|+..||.++|+|+.
T Consensus 2 d~~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~ 47 (64)
T 1wdc_A 2 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLV 47 (64)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567788999999999999999999998 7898999999999875
No 11
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=98.71 E-value=5.5e-09 Score=84.11 Aligned_cols=77 Identities=19% Similarity=0.271 Sum_probs=58.3
Q ss_pred hhhhhhhhhHHHHHHH-----hccchHHHHHHHhhhhCCCcchhhhcceEEEEehhHHHHHHHHHHHHhHHHHHHHHHHH
Q psy10330 6 ANEKLEGENLQLIEKI-----QSIADEMETSKINIEKDHDCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCIVIQKNV 80 (109)
Q Consensus 6 ~~~~~~~~~~~~~e~~-----~~~~~~~~~~~il~~~~~~~~~~~~G~tkvF~k~~~~~~Le~~r~~~l~~~a~~IQ~~~ 80 (109)
|.++..+++.+....+ ...+++..|+.||..+++++++|++|+||||+|.++++.||..+......++. |++.+
T Consensus 702 p~R~~f~eF~~RY~~L~~~~~~~~d~~~~~~~ll~~~~~~~~~~~~G~TKVF~r~g~~~~le~~~~~~~~~~~~-ii~~v 780 (784)
T 2v26_A 702 PSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAE-LVKRV 780 (784)
T ss_dssp SEEEEHHHHHHHHGGGCCHHHHTSCHHHHHHHHHHHTTCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHHHHH-HHHHH
T ss_pred CccccHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHcCCCcCcEEeCCceEEEcCCHHHHHHHHHhhCHHHHHH-HHHHH
Confidence 4555566666555432 33578999999999999999999999999999999999999886655444444 44667
Q ss_pred HHH
Q psy10330 81 RCF 83 (109)
Q Consensus 81 Rg~ 83 (109)
|+|
T Consensus 781 ~~w 783 (784)
T 2v26_A 781 NHW 783 (784)
T ss_dssp HHH
T ss_pred Hhh
Confidence 776
No 12
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=98.61 E-value=6.6e-08 Score=54.85 Aligned_cols=41 Identities=24% Similarity=0.347 Sum_probs=37.2
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhc
Q psy10330 68 KLKRCCIVIQKNVRCFLVRKKYLSI---LKSVATLQRWTRGYLA 108 (109)
Q Consensus 68 ~l~~~a~~IQ~~~Rg~~~Rr~~~~~---r~a~~~iQ~~~R~~~a 108 (109)
++...++.+|+.+|||++|+.|.++ +.|+..||.++|+|+.
T Consensus 2 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~ 45 (63)
T 2bl0_A 2 RIGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLE 45 (63)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567899999999999999999998 7899999999999875
No 13
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=98.46 E-value=2e-08 Score=80.81 Aligned_cols=65 Identities=34% Similarity=0.535 Sum_probs=38.0
Q ss_pred hhhhhhhhhHHHHHHHh--------ccchHHHHHHHhhhhCCCcchhhhcceEEEEehhHHHHHHHHHHHHhH
Q psy10330 6 ANEKLEGENLQLIEKIQ--------SIADEMETSKINIEKDHDCDKYKFGKTKIFFRSGQVAYLEKLRAEKLK 70 (109)
Q Consensus 6 ~~~~~~~~~~~~~e~~~--------~~~~~~~~~~il~~~~~~~~~~~~G~tkvF~k~~~~~~Le~~r~~~l~ 70 (109)
|.++..+++.+....+. ..+++..|+.||..+++++++|++|+||||+|.+++..||+.|+.++.
T Consensus 710 p~R~~f~eF~~RY~~L~~~~~~~~~~~d~k~~~~~ll~~~~~~~~~~~~G~TKVFlr~g~~~~LE~~R~~~l~ 782 (783)
T 4db1_A 710 PNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERLS 782 (783)
T ss_dssp CEEEEC--------------------------CCHHHHSSSSCGGGEEECSSEEEECTTHHHHHHHHC-----
T ss_pred CccCcHHHHHHHHHHhCccccCCCCCCCHHHHHHHHHHhCCCCcCeEEECCEEEEECcCHHHHHHHHHHHHhc
Confidence 44445555554444332 247889999999999999999999999999999999999999987764
No 14
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=98.41 E-value=1.3e-08 Score=81.77 Aligned_cols=69 Identities=23% Similarity=0.293 Sum_probs=21.5
Q ss_pred hhhhhhhhhHHHHHHHh------ccchHHHHHHHhhhhCCCcchhhhcceEEEEehhHHHHHHHHHHHHhHHHHH
Q psy10330 6 ANEKLEGENLQLIEKIQ------SIADEMETSKINIEKDHDCDKYKFGKTKIFFRSGQVAYLEKLRAEKLKRCCI 74 (109)
Q Consensus 6 ~~~~~~~~~~~~~e~~~------~~~~~~~~~~il~~~~~~~~~~~~G~tkvF~k~~~~~~Le~~r~~~l~~~a~ 74 (109)
|.++..+++.+....+. ..+++..|+.||..+++++++|++|+||||+|.+++..||..|+.++...++
T Consensus 693 p~R~~f~eF~~RY~~L~~~~~~~~~d~k~~~~~lL~~~~~~~~~~~~G~TKVF~r~~~l~~LE~~R~~~l~~~~~ 767 (770)
T 1w9i_A 693 PNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEARELRGDYKDD 767 (770)
T ss_dssp CEEEESCC-----------------------------------CCCCCSSEEEECTTTTTC--------------
T ss_pred cccccHHHHHHHHHHhccccccCCCCHHHHHHHHHHhcCCCcccEEeCCeeEEecccHHHHHHHHHHHHHHHHhc
Confidence 34444445544443321 2477899999999999999999999999999999999999999998876654
No 15
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=98.36 E-value=7.9e-07 Score=73.78 Aligned_cols=41 Identities=41% Similarity=0.656 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy10330 69 LKRCCIVIQKNVRCFLVRKKYLSILKSVATLQRWTRGYLAR 109 (109)
Q Consensus 69 l~~~a~~IQ~~~Rg~~~Rr~~~~~r~a~~~iQ~~~R~~~aR 109 (109)
...+++.||++||||.+|+.|.+.+.+++.||+.|||+.+|
T Consensus 815 ~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laR 855 (1080)
T 2dfs_A 815 RTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVR 855 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678888888888888888888888888888888887664
No 16
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=98.27 E-value=4.9e-08 Score=77.75 Aligned_cols=46 Identities=26% Similarity=0.406 Sum_probs=36.8
Q ss_pred cchHHHHHHHhhhhCCCcchhhhcceEEEEehh-HHHHHHHHHHHHh
Q psy10330 24 IADEMETSKINIEKDHDCDKYKFGKTKIFFRSG-QVAYLEKLRAEKL 69 (109)
Q Consensus 24 ~~~~~~~~~il~~~~~~~~~~~~G~tkvF~k~~-~~~~Le~~r~~~l 69 (109)
.+++..|+.||..++.++++|++|+||||+|.+ ++..||+.|+.++
T Consensus 650 ~~~k~~~~~ll~~~~~~~~~~~~G~TKVF~r~~~~l~~LE~~R~~~l 696 (697)
T 1lkx_A 650 GTAKQATELILQQHNIDKEEIRMGKTKVFIRNPTTLFYFEEKRELEM 696 (697)
T ss_dssp ---CHHHHHHHHTTCCCGGGEEECSSBEEESSSHHHHHHHTCC----
T ss_pred CCHHHHHHHHHHHcCCCcCcEEeCCeeEEEeCCchHHHHHHHHHhhC
Confidence 467899999999999999999999999999996 7899999887764
No 17
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.09 E-value=1.1e-05 Score=44.66 Aligned_cols=43 Identities=19% Similarity=0.192 Sum_probs=37.4
Q ss_pred EEehhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10330 52 FFRSGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRKKYLSILK 94 (109)
Q Consensus 52 F~k~~~~~~Le~~r~~~l~~~a~~IQ~~~Rg~~~Rr~~~~~r~ 94 (109)
.++..+.+++.+.....+..+++.||++||||.+|+.|..++.
T Consensus 10 ~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r~ 52 (58)
T 2ix7_C 10 RIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRR 52 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456678889999988999999999999999999999998764
No 18
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=97.89 E-value=2.8e-05 Score=41.28 Aligned_cols=37 Identities=14% Similarity=0.315 Sum_probs=29.0
Q ss_pred EehhHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHH
Q psy10330 53 FRSGQVAYLEKLRAEKLK--RCCIVIQKNVRCFLVRKKY 89 (109)
Q Consensus 53 ~k~~~~~~Le~~r~~~l~--~~a~~IQ~~~Rg~~~Rr~~ 89 (109)
++..+.+++.+....... .+++.||++||||.+|+.|
T Consensus 9 iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 9 LQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 445667777776655554 4999999999999999987
No 19
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=95.86 E-value=0.0081 Score=29.00 Aligned_cols=19 Identities=26% Similarity=0.482 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy10330 70 KRCCIVIQKNVRCFLVRKK 88 (109)
Q Consensus 70 ~~~a~~IQ~~~Rg~~~Rr~ 88 (109)
..+|+.||..||+|+.++.
T Consensus 6 e~aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 6 EVSAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3589999999999998865
No 20
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=95.72 E-value=0.0067 Score=28.41 Aligned_cols=18 Identities=33% Similarity=0.608 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy10330 70 KRCCIVIQKNVRCFLVRK 87 (109)
Q Consensus 70 ~~~a~~IQ~~~Rg~~~Rr 87 (109)
..+|+.||..||+|+.++
T Consensus 6 e~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 6 EVSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 468999999999998764
No 21
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=94.36 E-value=0.16 Score=33.04 Aligned_cols=32 Identities=19% Similarity=0.457 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10330 69 LKRCCIVIQKNVRCFLVRKKYLSILKSVATLQ 100 (109)
Q Consensus 69 l~~~a~~IQ~~~Rg~~~Rr~~~~~r~a~~~iQ 100 (109)
...+++.||+.+|||++|+.|.-.-.++..+.
T Consensus 44 R~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~ 75 (148)
T 3gn4_A 44 RAEACIKMQKTIRMWLCKRRHKPRIDGLVKVG 75 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 35789999999999999999986655544443
No 22
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=93.71 E-value=0.1 Score=33.94 Aligned_cols=17 Identities=18% Similarity=0.335 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHhhhcC
Q psy10330 93 LKSVATLQRWTRGYLAR 109 (109)
Q Consensus 93 r~a~~~iQ~~~R~~~aR 109 (109)
..+++.||+.+|||++|
T Consensus 45 ~~~~i~iQktvR~~L~r 61 (148)
T 3gn4_A 45 AEACIKMQKTIRMWLCK 61 (148)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 57899999999999985
No 23
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=92.02 E-value=0.21 Score=27.50 Aligned_cols=38 Identities=32% Similarity=0.453 Sum_probs=27.9
Q ss_pred EehhHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHH
Q psy10330 53 FRSGQVAYLEKLRAEKL---KRCCIVIQKNVRCFLVRKKYL 90 (109)
Q Consensus 53 ~k~~~~~~Le~~r~~~l---~~~a~~IQ~~~Rg~~~Rr~~~ 90 (109)
+++...|++.+...... ..++..||.++|+|...+.+.
T Consensus 12 ~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w~ 52 (64)
T 1wdc_A 12 FQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ 52 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh
Confidence 34556778777655544 577889999999999887654
No 24
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=91.67 E-value=0.19 Score=41.03 Aligned_cols=42 Identities=29% Similarity=0.368 Sum_probs=33.5
Q ss_pred EEEehhHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHH
Q psy10330 51 IFFRSGQVAYLEKLRAEKL---KRCCIVIQKNVRCFLVRKKYLSI 92 (109)
Q Consensus 51 vF~k~~~~~~Le~~r~~~l---~~~a~~IQ~~~Rg~~~Rr~~~~~ 92 (109)
+.++..+++++.+.+..++ ..++++||++||+|+.++.|.-.
T Consensus 783 ~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~w~ 827 (837)
T 1kk8_A 783 SMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWW 827 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHH
Confidence 4456677888888877665 57899999999999999887643
No 25
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=91.59 E-value=0.32 Score=26.69 Aligned_cols=38 Identities=18% Similarity=0.354 Sum_probs=27.8
Q ss_pred EehhHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHH
Q psy10330 53 FRSGQVAYLEKLRAEKL---KRCCIVIQKNVRCFLVRKKYL 90 (109)
Q Consensus 53 ~k~~~~~~Le~~r~~~l---~~~a~~IQ~~~Rg~~~Rr~~~ 90 (109)
+++...|++.+....+. ..++..||.++|+|..++.+.
T Consensus 10 ~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w~ 50 (63)
T 2bl0_A 10 VQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNWA 50 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCh
Confidence 34556788877655554 578889999999999876543
No 26
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=82.75 E-value=2.4 Score=27.98 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy10330 71 RCCIVIQKNVRCFLVRKKYLS 91 (109)
Q Consensus 71 ~~a~~IQ~~~Rg~~~Rr~~~~ 91 (109)
.+|..||.+||.|..|+.+..
T Consensus 131 ~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 131 VSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccc
Confidence 589999999999998887764
No 27
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=76.92 E-value=2.2 Score=35.87 Aligned_cols=40 Identities=28% Similarity=0.327 Sum_probs=30.5
Q ss_pred EEEehhHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHH
Q psy10330 51 IFFRSGQVAYLEKLRAEKL---KRCCIVIQKNVRCFLVRKKYL 90 (109)
Q Consensus 51 vF~k~~~~~~Le~~r~~~l---~~~a~~IQ~~~Rg~~~Rr~~~ 90 (109)
+.++..+++++.+.+..++ ..+++.||++||+|..++.|.
T Consensus 796 ~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~~ 838 (1184)
T 1i84_S 796 IAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWP 838 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3455667788887766554 478999999999999987654
No 28
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=67.42 E-value=4.5 Score=32.84 Aligned_cols=20 Identities=25% Similarity=0.400 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHhhhcC
Q psy10330 90 LSILKSVATLQRWTRGYLAR 109 (109)
Q Consensus 90 ~~~r~a~~~iQ~~~R~~~aR 109 (109)
.++..+++.||+.||||++|
T Consensus 765 ~~l~~~~~~iQ~~~Rg~l~R 784 (795)
T 1w7j_A 765 DKLRAACIRIQKTIRGWLMR 784 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34467899999999999876
No 29
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=44.51 E-value=18 Score=15.85 Aligned_cols=10 Identities=0% Similarity=0.075 Sum_probs=4.5
Q ss_pred HHHHHHHHhh
Q psy10330 97 ATLQRWTRGY 106 (109)
Q Consensus 97 ~~iQ~~~R~~ 106 (109)
..||.+||.+
T Consensus 10 llI~d~~r~~ 19 (23)
T 3dvk_B 10 MMIMDYYKQS 19 (26)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444444443
No 30
>3dve_B Voltage-dependent N-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.35A {Oryctolagus cuniculus} PDB: 3dvj_B
Probab=35.93 E-value=29 Score=15.13 Aligned_cols=13 Identities=0% Similarity=-0.018 Sum_probs=7.4
Q ss_pred HHHHHHHHHHhhh
Q psy10330 95 SVATLQRWTRGYL 107 (109)
Q Consensus 95 a~~~iQ~~~R~~~ 107 (109)
|+..||.+||.+.
T Consensus 7 AallI~d~~r~~k 19 (23)
T 3dve_B 7 AALMIFDFYKQNK 19 (26)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHh
Confidence 4455666666554
No 31
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=35.51 E-value=34 Score=15.32 Aligned_cols=16 Identities=38% Similarity=0.482 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHH
Q psy10330 73 CIVIQKNVRCFLVRKK 88 (109)
Q Consensus 73 a~~IQ~~~Rg~~~Rr~ 88 (109)
.-.||-++|.+..|+.
T Consensus 5 t~LIqdyfRkfkkrke 20 (26)
T 2f3y_B 5 TFLIQEYFRKFKKRKE 20 (26)
T ss_pred hhhHHHHHHHHHHhHH
Confidence 3467888877766653
No 32
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=26.20 E-value=1.3e+02 Score=25.30 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q psy10330 55 SGQVAYLEKLRAEKLKRCCIVIQKNVRCFLVRK 87 (109)
Q Consensus 55 ~~~~~~Le~~r~~~l~~~a~~IQ~~~Rg~~~Rr 87 (109)
+.+++++.+.+..++..+++.||..++++..|+
T Consensus 782 q~~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~ 814 (1052)
T 4anj_A 782 KRVNHWLICSRWKKVQWCSLSVIKLKNKIKYRA 814 (1052)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346788888888889999999999888765443
No 33
>2lma_A THP5 peptide; CD4+, immune system; NMR {Synthetic}
Probab=25.49 E-value=28 Score=15.20 Aligned_cols=9 Identities=33% Similarity=0.401 Sum_probs=6.2
Q ss_pred Ccccchhhh
Q psy10330 1 MELIAANEK 9 (109)
Q Consensus 1 ~~~~~~~~~ 9 (109)
|..|.|+|+
T Consensus 13 mtvisppef 21 (26)
T 2lma_A 13 MTVISPPEF 21 (26)
T ss_dssp STTSSGGGG
T ss_pred EEEeCCccc
Confidence 556777775
No 34
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens}
Probab=25.13 E-value=68 Score=15.55 Aligned_cols=17 Identities=35% Similarity=0.464 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy10330 72 CCIVIQKNVRCFLVRKK 88 (109)
Q Consensus 72 ~a~~IQ~~~Rg~~~Rr~ 88 (109)
+.-.||-++|.+..|+.
T Consensus 13 atfLIQdyFRkfkkrke 29 (37)
T 2be6_D 13 ATFLIQEYFRKFKKRKE 29 (37)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34578888887776654
No 35
>3bxl_B CAM, voltage-dependent R-type calcium channel subunit alpha-1E peptide; ION channel, calmodulin, IQ domain, facillitation, inactivation; 2.30A {Rattus norvegicus} PDB: 3bxk_B
Probab=20.55 E-value=73 Score=14.22 Aligned_cols=16 Identities=19% Similarity=0.227 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHH
Q psy10330 72 CCIVIQKNVRCFLVRK 87 (109)
Q Consensus 72 ~a~~IQ~~~Rg~~~Rr 87 (109)
++..|+-+||-+..++
T Consensus 4 Aa~mI~e~yrq~K~~r 19 (26)
T 3bxl_B 4 AAMMIMDYYKQSKVKK 19 (26)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 4667788887666654
Done!