Your job contains 1 sequence.
>psy10331
MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI
QERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDI
FLLLQSSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL
VSI
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10331
(183 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0262937 - symbol:Rabex-5 "Rabaptin-5-associated ex... 519 7.4e-50 1
UNIPROTKB|F1RJI2 - symbol:LOC100516668 "Uncharacterized p... 448 2.5e-42 1
UNIPROTKB|F6Y7P9 - symbol:RABGEF1 "Uncharacterized protei... 445 5.2e-42 1
UNIPROTKB|O18973 - symbol:RABGEF1 "Rab5 GDP/GTP exchange ... 443 8.4e-42 1
UNIPROTKB|Q2TBX8 - symbol:RABGEF1 "RABGEF1 protein" speci... 443 8.4e-42 1
UNIPROTKB|B4DZM7 - symbol:RABGEF1 "Rab5 GDP/GTP exchange ... 441 1.4e-41 1
UNIPROTKB|E7ERJ8 - symbol:KCTD7 "BTB/POZ domain-containin... 441 1.4e-41 1
UNIPROTKB|E9PFK9 - symbol:RABGEF1 "Rab5 GDP/GTP exchange ... 441 1.4e-41 1
UNIPROTKB|E2R706 - symbol:RABGEF1 "Uncharacterized protei... 445 1.5e-41 1
MGI|MGI:1929459 - symbol:Rabgef1 "RAB guanine nucleotide ... 440 1.7e-41 1
RGD|1307295 - symbol:Rabgef1 "RAB guanine nucleotide exch... 437 3.6e-41 1
ZFIN|ZDB-GENE-040426-1486 - symbol:rabgef1 "RAB guanine n... 434 7.5e-41 1
UNIPROTKB|Q9UJ41 - symbol:RABGEF1 "Rab5 GDP/GTP exchange ... 421 3.2e-40 2
UNIPROTKB|E1C0P2 - symbol:RABGEF1 "Uncharacterized protei... 425 6.8e-40 1
ZFIN|ZDB-GENE-040426-813 - symbol:rabgef1l "RAB guanine n... 403 1.5e-37 1
WB|WBGene00012644 - symbol:rabx-5 species:6239 "Caenorhab... 334 5.7e-30 1
UNIPROTKB|Q8I100 - symbol:rabx-5 "Protein RABX-5" species... 334 5.7e-30 1
ASPGD|ASPL0000018244 - symbol:AN3678 species:162425 "Emer... 238 5.5e-21 2
TAIR|locus:2184727 - symbol:VPS9B "AT5G09320" species:370... 236 8.5e-19 1
TAIR|locus:2092211 - symbol:VPS9A species:3702 "Arabidops... 230 2.0e-18 1
POMBASE|SPBC4F6.10 - symbol:vps901 "guanyl-nucleotide exc... 227 5.1e-18 1
DICTYBASE|DDB_G0271844 - symbol:DDB_G0271844 "Rho GTPase ... 223 6.7e-17 1
DICTYBASE|DDB_G0285073 - symbol:DDB_G0285073 "vacuolar so... 213 2.6e-16 1
CGD|CAL0006139 - symbol:orf19.5533 species:5476 "Candida ... 212 3.6e-16 1
UNIPROTKB|A2RV61 - symbol:gapvd1 "GTPase-activating prote... 178 3.7e-12 1
DICTYBASE|DDB_G0275413 - symbol:DDB_G0275413 "DUF726 fami... 164 4.8e-12 2
SGD|S000004563 - symbol:VPS9 "Guanine nucleotide exchange... 165 1.6e-11 1
UNIPROTKB|A8WVM4 - symbol:rme-6 "Receptor-mediated endocy... 170 1.9e-11 1
WB|WBGene00004377 - symbol:rme-6 species:6239 "Caenorhabd... 166 4.9e-11 1
UNIPROTKB|Q9GYH7 - symbol:rme-6 "Receptor-mediated endocy... 166 4.9e-11 1
UNIPROTKB|E1C268 - symbol:GAPVD1 "Uncharacterized protein... 165 8.8e-11 1
UNIPROTKB|F8W9S7 - symbol:GAPVD1 "GTPase-activating prote... 160 2.9e-10 1
UNIPROTKB|E2RA33 - symbol:GAPVD1 "Uncharacterized protein... 160 2.9e-10 1
UNIPROTKB|E2RA13 - symbol:GAPVD1 "Uncharacterized protein... 160 3.1e-10 1
RGD|1307479 - symbol:Gapvd1 "GTPase activating protein an... 160 3.1e-10 1
UNIPROTKB|Q14C86 - symbol:GAPVD1 "GTPase-activating prote... 160 3.1e-10 1
UNIPROTKB|F1RS34 - symbol:GAPVD1 "Uncharacterized protein... 160 3.1e-10 1
UNIPROTKB|E2RA32 - symbol:GAPVD1 "Uncharacterized protein... 160 3.1e-10 1
MGI|MGI:1913941 - symbol:Gapvd1 "GTPase activating protei... 158 5.0e-10 1
ZFIN|ZDB-GENE-040718-117 - symbol:gapvd1 "GTPase activati... 158 5.0e-10 1
UNIPROTKB|A5D794 - symbol:GAPVD1 "GTPase-activating prote... 157 6.1e-10 1
DICTYBASE|DDB_G0289495 - symbol:DDB_G0289495 "vacuolar so... 152 1.7e-09 1
UNIPROTKB|Q29HW3 - symbol:GA14078 "Receptor-mediated endo... 151 3.5e-09 1
FB|FBgn0030286 - symbol:CG1657 species:7227 "Drosophila m... 147 8.9e-09 1
DICTYBASE|DDB_G0272038 - symbol:rgfA "Vps9 domain-contain... 133 1.9e-07 1
ASPGD|ASPL0000000759 - symbol:AN5920 species:162425 "Emer... 122 2.4e-05 1
UNIPROTKB|E7EPJ1 - symbol:RIN2 "Ras and Rab interactor 2"... 113 0.00021 1
UNIPROTKB|D3ZZH1 - symbol:Rin2 "Protein Rin2" species:101... 113 0.00048 1
RGD|1305873 - symbol:Rin2 "Ras and Rab interactor 2" spec... 113 0.00050 1
UNIPROTKB|Q8WYP3 - symbol:RIN2 "Ras and Rab interactor 2"... 113 0.00050 1
UNIPROTKB|F1PXX0 - symbol:RIN2 "Uncharacterized protein" ... 113 0.00051 1
UNIPROTKB|D4A6C4 - symbol:Rin2 "Ras and Rab interactor 2 ... 113 0.00051 1
MGI|MGI:1921280 - symbol:Rin2 "Ras and Rab interactor 2" ... 113 0.00051 1
UNIPROTKB|J9NY33 - symbol:RIN2 "Uncharacterized protein" ... 113 0.00051 1
UNIPROTKB|J9P0L3 - symbol:RIN2 "Uncharacterized protein" ... 113 0.00054 1
UNIPROTKB|F1P3K9 - symbol:RIN2 "Uncharacterized protein" ... 112 0.00065 1
UNIPROTKB|E1B810 - symbol:RIN2 "Uncharacterized protein" ... 112 0.00069 1
>FB|FBgn0262937 [details] [associations]
symbol:Rabex-5 "Rabaptin-5-associated exchange factor for
Rab5 ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007474 "imaginal
disc-derived wing vein specification" evidence=IMP] [GO:0035214
"eye-antennal disc development" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IDA] [GO:0005622 "intracellular" evidence=IC] [GO:0017112
"Rab guanyl-nucleotide exchange factor activity" evidence=IDA]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 EMBL:AE014296 GO:GO:0003677 GO:GO:0007474
GO:GO:0008270 GO:GO:0040015 GO:GO:0031398 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 GO:GO:0035214
GeneTree:ENSGT00530000063341 eggNOG:NOG301606 EMBL:AY058763
RefSeq:NP_612093.1 UniGene:Dm.7401 SMR:Q9W0H9 MINT:MINT-969750
EnsemblMetazoa:FBtr0072663 GeneID:38144 KEGG:dme:Dmel_CG9139
UCSC:CG9139-RA CTD:38144 FlyBase:FBgn0262937 InParanoid:Q9W0H9
OMA:RCCRHIF OrthoDB:EOG4QZ621 GenomeRNAi:38144 NextBio:807171
Uniprot:Q9W0H9
Length = 696
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 99/183 (54%), Positives = 133/183 (72%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+QN Y + + N + + +DR+ +D+ EK M + LF P FT+DED D+++
Sbjct: 182 VQNAYTKVSDIVHNDPSFEIATNEDRDSAIDFFEKVVMTQNHKFLFSPYFTTDEDSDVKV 241
Query: 61 QERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDI 120
Q+RIRQL W+ AKHLDC I+E N+ RDLVYN++++L+ +DS +PQ+KL C CCR I
Sbjct: 242 QKRIRQLSWITAKHLDCSIDEVNSEARDLVYNAISELVGIDSYYSPQEKLQCTWRCCRHI 301
Query: 121 FLLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTN 179
F LL+ + G PASAD+FLPALIF+VLK NP RL SNI+FVTRF NA+RLMSGE+GY+FTN
Sbjct: 302 FELLKRATGGPASADDFLPALIFVVLKANPVRLHSNINFVTRFTNASRLMSGESGYYFTN 361
Query: 180 LVS 182
L S
Sbjct: 362 LCS 364
>UNIPROTKB|F1RJI2 [details] [associations]
symbol:LOC100516668 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:1900235 "negative regulation of Kit signaling
pathway" evidence=IEA] [GO:1900165 "negative regulation of
interleukin-6 secretion" evidence=IEA] [GO:0060368 "regulation of
Fc receptor mediated stimulatory signaling pathway" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0048261 "negative regulation of receptor-mediated
endocytosis" evidence=IEA] [GO:0046580 "negative regulation of Ras
protein signal transduction" evidence=IEA] [GO:0043305 "negative
regulation of mast cell degranulation" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001933 "negative regulation
of protein phosphorylation" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0003677 GO:GO:0008270 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 OMA:RYMSGQA EMBL:FP340504
Ensembl:ENSSSCT00000008480 Uniprot:F1RJI2
Length = 492
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 89/180 (49%), Positives = 121/180 (67%)
Query: 2 QNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQ 61
Q+FYQT A+RM+ V + E ++D +EKY M LY +FCP T DE +DL IQ
Sbjct: 184 QDFYQTVAERMQTR---GKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ 240
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
+RIR L WV + L + E V D+V ++T ++EMDS R P+DKLAC+ C + IF
Sbjct: 241 KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF 300
Query: 122 LLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 301 NAIKVTKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 360
>UNIPROTKB|F6Y7P9 [details] [associations]
symbol:RABGEF1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0003677 GO:GO:0008270 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
Ensembl:ENSCAFT00000017144 Uniprot:F6Y7P9
Length = 492
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 88/180 (48%), Positives = 121/180 (67%)
Query: 2 QNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQ 61
Q+FYQ A+RM+ V + E ++D +EKY M LY +FCP T DE +DL IQ
Sbjct: 184 QDFYQNVAERMQTR---GKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ 240
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
+RIR L WV + L + E + V D+V ++T ++EMDS R P+DKLAC+ C + IF
Sbjct: 241 KRIRALHWVTPQMLCVPVNEEISEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF 300
Query: 122 LLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 301 NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 360
>UNIPROTKB|O18973 [details] [associations]
symbol:RABGEF1 "Rab5 GDP/GTP exchange factor" species:9913
"Bos taurus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0055037 "recycling endosome" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:1900235 "negative regulation of Kit
signaling pathway" evidence=IEA] [GO:1900165 "negative regulation
of interleukin-6 secretion" evidence=IEA] [GO:0060368 "regulation
of Fc receptor mediated stimulatory signaling pathway"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0048261 "negative regulation of
receptor-mediated endocytosis" evidence=IEA] [GO:0046580 "negative
regulation of Ras protein signal transduction" evidence=IEA]
[GO:0043305 "negative regulation of mast cell degranulation"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0002686
"negative regulation of leukocyte migration" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0046872 GO:GO:0003677 GO:GO:0015031
GO:GO:0008270 GO:GO:0006897 GO:GO:0055037 InterPro:IPR003123
PROSITE:PS51205 GO:GO:0005769 InterPro:IPR013995 SMART:SM00167
EMBL:AJ001119 IPI:IPI00691292 RefSeq:NP_777016.1 UniGene:Bt.317
PDB:2FID PDB:2FIF PDBsum:2FID PDBsum:2FIF ProteinModelPortal:O18973
SMR:O18973 DIP:DIP-29059N IntAct:O18973 STRING:O18973 PRIDE:O18973
GeneID:282335 KEGG:bta:282335 CTD:27342 eggNOG:NOG301606
HOGENOM:HOG000070180 HOVERGEN:HBG062584 InParanoid:O18973
OrthoDB:EOG42FSHP EvolutionaryTrace:O18973 NextBio:20806130
ArrayExpress:O18973 Uniprot:O18973
Length = 492
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 88/180 (48%), Positives = 120/180 (66%)
Query: 2 QNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQ 61
Q+FYQ A+RM+ V + E ++D +EKY M LY +FCP T DE +DL IQ
Sbjct: 184 QDFYQNVAERMQTR---GKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ 240
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
+RIR L WV + L + E V D+V ++T ++EMDS R P+DKLAC+ C + IF
Sbjct: 241 KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF 300
Query: 122 LLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 301 NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 360
>UNIPROTKB|Q2TBX8 [details] [associations]
symbol:RABGEF1 "RABGEF1 protein" species:9913 "Bos taurus"
[GO:1900235 "negative regulation of Kit signaling pathway"
evidence=IEA] [GO:1900165 "negative regulation of interleukin-6
secretion" evidence=IEA] [GO:0060368 "regulation of Fc receptor
mediated stimulatory signaling pathway" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0048261 "negative regulation of receptor-mediated endocytosis"
evidence=IEA] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IEA] [GO:0043305 "negative regulation
of mast cell degranulation" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0002686 "negative regulation of leukocyte
migration" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0003677 GO:GO:0008270 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 IPI:IPI00691292 UniGene:Bt.317
HOVERGEN:HBG062584 OMA:RYMSGQA EMBL:DAAA02057950 EMBL:BC109491
SMR:Q2TBX8 STRING:Q2TBX8 Ensembl:ENSBTAT00000005011
InParanoid:Q2TBX8 Uniprot:Q2TBX8
Length = 491
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 88/180 (48%), Positives = 120/180 (66%)
Query: 2 QNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQ 61
Q+FYQ A+RM+ V + E ++D +EKY M LY +FCP T DE +DL IQ
Sbjct: 183 QDFYQNVAERMQTR---GKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ 239
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
+RIR L WV + L + E V D+V ++T ++EMDS R P+DKLAC+ C + IF
Sbjct: 240 KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF 299
Query: 122 LLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 300 NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 359
>UNIPROTKB|B4DZM7 [details] [associations]
symbol:RABGEF1 "Rab5 GDP/GTP exchange factor" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 SMART:SM00259 Pfam:PF02204 GO:GO:0003677
GO:GO:0008270 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 HOGENOM:HOG000070180 HOVERGEN:HBG062584 EMBL:AC027644
UniGene:Hs.530053 UniGene:Hs.709878 HGNC:HGNC:17676 ChiTaRS:RABGEF1
EMBL:AK303006 IPI:IPI00004974 SMR:B4DZM7 STRING:B4DZM7
Ensembl:ENST00000437078 UCSC:uc011kee.2 Uniprot:B4DZM7
Length = 505
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 87/180 (48%), Positives = 120/180 (66%)
Query: 2 QNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQ 61
Q+FY A+RM+ V + E ++D +EKY M LY +FCP T DE +DL IQ
Sbjct: 197 QDFYHNVAERMQTR---GKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ 253
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
+RIR L+WV + L + E V D+V ++T ++EMDS R P+DKLAC+ C + IF
Sbjct: 254 KRIRALRWVTPQMLCVPVNEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF 313
Query: 122 LLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 314 NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 373
>UNIPROTKB|E7ERJ8 [details] [associations]
symbol:KCTD7 "BTB/POZ domain-containing protein KCTD7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR002653
Pfam:PF01754 PROSITE:PS51036 SMART:SM00259 Pfam:PF02204
GO:GO:0003677 GO:GO:0008270 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 HGNC:HGNC:21957 ChiTaRS:KCTD7
EMBL:AC027644 EMBL:AC006001 EMBL:AC079588 IPI:IPI00963967
ProteinModelPortal:E7ERJ8 SMR:E7ERJ8 Ensembl:ENST00000380828
ArrayExpress:E7ERJ8 Bgee:E7ERJ8 Uniprot:E7ERJ8
Length = 531
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 87/180 (48%), Positives = 120/180 (66%)
Query: 2 QNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQ 61
Q+FY A+RM+ V + E ++D +EKY M LY +FCP T DE +DL IQ
Sbjct: 223 QDFYHNVAERMQTR---GKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ 279
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
+RIR L+WV + L + E V D+V ++T ++EMDS R P+DKLAC+ C + IF
Sbjct: 280 KRIRALRWVTPQMLCVPVNEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF 339
Query: 122 LLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 340 NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 399
>UNIPROTKB|E9PFK9 [details] [associations]
symbol:RABGEF1 "Rab5 GDP/GTP exchange factor" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 SMART:SM00259 Pfam:PF02204 GO:GO:0003677
GO:GO:0008270 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 EMBL:AC027644 HGNC:HGNC:17676 ChiTaRS:RABGEF1
IPI:IPI00004974 ProteinModelPortal:E9PFK9 SMR:E9PFK9 PRIDE:E9PFK9
Ensembl:ENST00000439720 ArrayExpress:E9PFK9 Bgee:E9PFK9
Uniprot:E9PFK9
Length = 504
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 87/180 (48%), Positives = 120/180 (66%)
Query: 2 QNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQ 61
Q+FY A+RM+ V + E ++D +EKY M LY +FCP T DE +DL IQ
Sbjct: 196 QDFYHNVAERMQTR---GKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ 252
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
+RIR L+WV + L + E V D+V ++T ++EMDS R P+DKLAC+ C + IF
Sbjct: 253 KRIRALRWVTPQMLCVPVNEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF 312
Query: 122 LLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 313 NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 372
>UNIPROTKB|E2R706 [details] [associations]
symbol:RABGEF1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR000210 InterPro:IPR003131 Pfam:PF02214
SMART:SM00225 Pfam:PF02204 GO:GO:0051260 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 EMBL:AAEX03004190 EMBL:AAEX03004191
EMBL:AAEX03004192 Ensembl:ENSCAFT00000017144 OMA:INQRRAI
Uniprot:E2R706
Length = 700
Score = 445 (161.7 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 88/180 (48%), Positives = 121/180 (67%)
Query: 2 QNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQ 61
Q+FYQ A+RM+ V + E ++D +EKY M LY +FCP T DE +DL IQ
Sbjct: 392 QDFYQNVAERMQTR---GKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ 448
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
+RIR L WV + L + E + V D+V ++T ++EMDS R P+DKLAC+ C + IF
Sbjct: 449 KRIRALHWVTPQMLCVPVNEEISEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF 508
Query: 122 LLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 509 NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 568
>MGI|MGI:1929459 [details] [associations]
symbol:Rabgef1 "RAB guanine nucleotide exchange factor (GEF)
1" species:10090 "Mus musculus" [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IMP] [GO:0002686 "negative
regulation of leukocyte migration" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0031982 "vesicle" evidence=IDA] [GO:0033004
"negative regulation of mast cell activation" evidence=IMP]
[GO:0043305 "negative regulation of mast cell degranulation"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048261 "negative regulation of receptor-mediated
endocytosis" evidence=IMP] [GO:0050728 "negative regulation of
inflammatory response" evidence=IMP] [GO:0060368 "regulation of Fc
receptor mediated stimulatory signaling pathway" evidence=IDA;IMP]
[GO:1900165 "negative regulation of interleukin-6 secretion"
evidence=IMP] [GO:1900235 "negative regulation of Kit signaling
pathway" evidence=IMP] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 SMART:SM00259 MGI:MGI:1929459 Pfam:PF02204
GO:GO:0046872 GO:GO:0003677 GO:GO:0015031 GO:GO:0050728
GO:GO:0008270 GO:GO:0006897 GO:GO:0002686 GO:GO:0055037
GO:GO:0004842 InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769
GO:GO:0031982 InterPro:IPR013995 SMART:SM00167 GO:GO:0048261
GO:GO:0001933 GO:GO:0046580 GO:GO:1900165 GO:GO:0043305
GO:GO:0060368 GeneTree:ENSGT00530000063341 CTD:27342
eggNOG:NOG301606 HOGENOM:HOG000070180 HOVERGEN:HBG062584
OrthoDB:EOG42FSHP EMBL:AF093590 EMBL:AK044568 EMBL:AK146734
EMBL:BC018229 IPI:IPI00124636 RefSeq:NP_001185988.1
RefSeq:NP_064367.1 UniGene:Mm.288639 ProteinModelPortal:Q9JM13
SMR:Q9JM13 STRING:Q9JM13 PhosphoSite:Q9JM13 PaxDb:Q9JM13
PRIDE:Q9JM13 Ensembl:ENSMUST00000026390 Ensembl:ENSMUST00000119797
GeneID:56715 KEGG:mmu:56715 UCSC:uc008zuf.2 InParanoid:Q9JM13
OMA:RYMSGQA NextBio:313183 Bgee:Q9JM13 CleanEx:MM_RABGEF1
Genevestigator:Q9JM13 GermOnline:ENSMUSG00000025340 GO:GO:1900235
Uniprot:Q9JM13
Length = 491
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 87/180 (48%), Positives = 120/180 (66%)
Query: 2 QNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQ 61
Q+FYQ A+RM+ V + E ++D +EK+ M LY +FCP T DE +DL IQ
Sbjct: 183 QDFYQNVAERMQTR---GKVPPEKVEKIMDQIEKHIMTRLYKFVFCPETTDDEKKDLAIQ 239
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
+RIR L WV + L + E V D+V ++T ++EMDS R P+DKLAC+ C + IF
Sbjct: 240 KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIF 299
Query: 122 LLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 300 NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 359
>RGD|1307295 [details] [associations]
symbol:Rabgef1 "RAB guanine nucleotide exchange factor (GEF) 1"
species:10116 "Rattus norvegicus" [GO:0001933 "negative regulation
of protein phosphorylation" evidence=IEA;ISO] [GO:0002686 "negative
regulation of leukocyte migration" evidence=IEA;ISO] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=IEA;ISO]
[GO:0033004 "negative regulation of mast cell activation"
evidence=ISO] [GO:0043305 "negative regulation of mast cell
degranulation" evidence=IEA;ISO] [GO:0046580 "negative regulation
of Ras protein signal transduction" evidence=IEA;ISO] [GO:0048261
"negative regulation of receptor-mediated endocytosis"
evidence=IEA;ISO] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA;ISO] [GO:0060368 "regulation of Fc receptor
mediated stimulatory signaling pathway" evidence=IEA;ISO]
[GO:1900165 "negative regulation of interleukin-6 secretion"
evidence=IEA;ISO] [GO:1900235 "negative regulation of Kit signaling
pathway" evidence=IEA;ISO] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 SMART:SM00259 RGD:1307295 Pfam:PF02204
GO:GO:0003677 GO:GO:0008270 EMBL:CH473973 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 CTD:27342 RefSeq:NP_001101803.1
UniGene:Rn.21688 Ensembl:ENSRNOT00000001196 GeneID:360797
KEGG:rno:360797 NextBio:674129 Uniprot:G3V631
Length = 502
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 86/180 (47%), Positives = 120/180 (66%)
Query: 2 QNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQ 61
Q+FYQ A+R++ V + E ++D +EK+ M LY +FCP T DE +DL IQ
Sbjct: 194 QDFYQNVAERLQTR---GKVPPEKVEKMMDQIEKHIMTRLYKFVFCPETTDDEKKDLAIQ 250
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
+RIR L WV + L + E V D+V ++T ++EMDS R P+DKLAC+ C + IF
Sbjct: 251 KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIF 310
Query: 122 LLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 311 NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 370
>ZFIN|ZDB-GENE-040426-1486 [details] [associations]
symbol:rabgef1 "RAB guanine nucleotide exchange
factor (GEF) 1" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 SMART:SM00259 Pfam:PF02204
ZFIN:ZDB-GENE-040426-1486 GO:GO:0003677 GO:GO:0008270
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 CTD:27342 HOGENOM:HOG000070180
HOVERGEN:HBG062584 OrthoDB:EOG42FSHP OMA:RYMSGQA EMBL:AL935293
EMBL:BC061953 IPI:IPI00481337 RefSeq:NP_957137.1 UniGene:Dr.123825
UniGene:Dr.9342 SMR:Q6P6Y4 STRING:Q6P6Y4 Ensembl:ENSDART00000018977
Ensembl:ENSDART00000138243 GeneID:393816 KEGG:dre:393816
InParanoid:Q6P6Y4 NextBio:20814806 Uniprot:Q6P6Y4
Length = 502
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 87/181 (48%), Positives = 121/181 (66%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+Q+FYQ + R+ NH S++ + ++D VEKY M LY +FCP + DE +DL
Sbjct: 192 VQDFYQGMSDRLLNH---FKGSSEKVDRVMDQVEKYIMTRLYKSVFCPETSDDEKKDLAT 248
Query: 61 QERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDI 120
Q RIR L WV + L +EE V D V ++T ++EMDS R P+DKLAC+ +C + I
Sbjct: 249 QHRIRALHWVTIQMLCVPVEEEIPEVSDSVVKAITDIIEMDSKRVPRDKLACITSCSKHI 308
Query: 121 FLLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTN 179
F ++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTN
Sbjct: 309 FNAIRVTKNEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTN 368
Query: 180 L 180
L
Sbjct: 369 L 369
>UNIPROTKB|Q9UJ41 [details] [associations]
symbol:RABGEF1 "Rab5 GDP/GTP exchange factor" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=IDA] InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036
SMART:SM00259 Pfam:PF02204 GO:GO:0046872 GO:GO:0003677
GO:GO:0015031 GO:GO:0008270 GO:GO:0006897 GO:GO:0055037
InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769 GO:GO:0017112
InterPro:IPR013995 SMART:SM00167 GermOnline:ENSG00000154710
PDB:2OT3 PDBsum:2OT3 CTD:27342 eggNOG:NOG301606
HOGENOM:HOG000070180 HOVERGEN:HBG062584 OrthoDB:EOG42FSHP
EMBL:AJ250042 EMBL:DQ230533 EMBL:DQ230534 EMBL:AK127790
EMBL:BT007107 EMBL:AK223329 EMBL:AC027644 EMBL:BC015330
IPI:IPI00418213 IPI:IPI00816003 IPI:IPI00924641 RefSeq:NP_055319.1
UniGene:Hs.530053 UniGene:Hs.709878 PDB:1TXU PDB:2C7M PDB:2C7N
PDBsum:1TXU PDBsum:2C7M PDBsum:2C7N ProteinModelPortal:Q9UJ41
SMR:Q9UJ41 DIP:DIP-29348N IntAct:Q9UJ41 MINT:MINT-1189235
STRING:Q9UJ41 PhosphoSite:Q9UJ41 DMDM:56405102 PRIDE:Q9UJ41
DNASU:27342 Ensembl:ENST00000284957 Ensembl:ENST00000450873
GeneID:27342 KEGG:hsa:27342 UCSC:uc003tvf.3 UCSC:uc003tvh.3
GeneCards:GC07P066205 HGNC:HGNC:17676 HPA:HPA001407 MIM:609700
neXtProt:NX_Q9UJ41 PharmGKB:PA134946532 ChiTaRS:RABGEF1
EvolutionaryTrace:Q9UJ41 GenomeRNAi:27342 NextBio:50418
ArrayExpress:Q9UJ41 CleanEx:HS_RABGEF1 Genevestigator:Q9UJ41
Uniprot:Q9UJ41
Length = 708
Score = 421 (153.3 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 80/155 (51%), Positives = 109/155 (70%)
Query: 27 ELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQERIRQLKWVNAKHLDCGIEETNATV 86
E ++D +EKY M LY +FCP T DE +DL IQ+RIR L+WV + L + E V
Sbjct: 422 EKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALRWVTPQMLCVPVNEDIPEV 481
Query: 87 RDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIFLLLQSSVG-PASADEFLPALIFLVL 145
D+V ++T ++EMDS R P+DKLAC+ C + IF ++ + PASAD+FLP LI++VL
Sbjct: 482 SDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADDFLPTLIYIVL 541
Query: 146 KMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
K NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 542 KGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 576
Score = 35 (17.4 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 2 QNFYQTFAKRME 13
Q+FY A+RM+
Sbjct: 361 QDFYHNVAERMQ 372
>UNIPROTKB|E1C0P2 [details] [associations]
symbol:RABGEF1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0001933 "negative regulation
of protein phosphorylation" evidence=IEA] [GO:0002686 "negative
regulation of leukocyte migration" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0043305 "negative regulation of mast
cell degranulation" evidence=IEA] [GO:0046580 "negative regulation
of Ras protein signal transduction" evidence=IEA] [GO:0048261
"negative regulation of receptor-mediated endocytosis"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0060368 "regulation of Fc receptor
mediated stimulatory signaling pathway" evidence=IEA] [GO:1900165
"negative regulation of interleukin-6 secretion" evidence=IEA]
[GO:1900235 "negative regulation of Kit signaling pathway"
evidence=IEA] InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036
SMART:SM00259 Pfam:PF02204 GO:GO:0003677 GO:GO:0008270
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GeneTree:ENSGT00530000063341 CTD:27342 OMA:RYMSGQA
EMBL:AADN02025920 IPI:IPI00576946 RefSeq:XP_415796.2
UniGene:Gga.48513 UniGene:Gga.53522 Ensembl:ENSGALT00000004122
GeneID:417548 KEGG:gga:417548 NextBio:20820833 Uniprot:E1C0P2
Length = 491
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 84/180 (46%), Positives = 118/180 (65%)
Query: 2 QNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQ 61
Q+FYQ A++++ V + E +D +EKY M Y +FCP T DE +DL +Q
Sbjct: 183 QDFYQNVAEKLQTRW---KVPPEKVEKAMDQIEKYIMTRQYKYVFCPETTDDEKKDLAVQ 239
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
+RIR L WV + L + E V D+V ++T ++EMDS R P+DKLAC+ C + IF
Sbjct: 240 KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF 299
Query: 122 LLLQSSVG-PASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
++ + PASAD+FLP LI++VLK NP RL+SNI ++TRFCN +RLM+GE GY+FTNL
Sbjct: 300 NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL 359
>ZFIN|ZDB-GENE-040426-813 [details] [associations]
symbol:rabgef1l "RAB guanine nucleotide exchange
factor (GEF) 1, like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002653 Pfam:PF01754
PROSITE:PS51036 Pfam:PF02204 ZFIN:ZDB-GENE-040426-813 GO:GO:0003677
GO:GO:0008270 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 eggNOG:NOG301606 HOGENOM:HOG000070180
HOVERGEN:HBG062584 OrthoDB:EOG42FSHP EMBL:BC045469 IPI:IPI00859614
RefSeq:NP_957235.1 UniGene:Dr.82264 ProteinModelPortal:Q7ZVP0
SMR:Q7ZVP0 GeneID:393915 KEGG:dre:393915 CTD:393915
NextBio:20814891 ArrayExpress:Q7ZVP0 Uniprot:Q7ZVP0
Length = 470
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 83/182 (45%), Positives = 119/182 (65%)
Query: 1 MQNFYQTFAKRME-NHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLE 59
+Q+FYQ+ ++ ++ N K +V E +++ VE+Y M LY LFCP T DE +DL
Sbjct: 175 VQDFYQSMSEYLQTNFKGSPEVV----ETVMEEVERYVMGRLYEQLFCPDHTDDEKKDLT 230
Query: 60 IQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRD 119
+Q+RIR L WV+ L ++E V D V + T L+ +DS + P++KLACV C +
Sbjct: 231 VQKRIRALHWVSIAMLCVPLDEQIPKVSDSVERAKTDLINLDSKKVPKEKLACVTRCSKH 290
Query: 120 IFLLLQSSV-GPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFT 178
I +Q S ASAD+FLPAL++++LK NP RL SNI ++TR+CN +RLMSGE GY+FT
Sbjct: 291 ILTAIQGSKKAAASADDFLPALVYIILKANPPRLHSNIQYITRYCNPSRLMSGEDGYYFT 350
Query: 179 NL 180
NL
Sbjct: 351 NL 352
>WB|WBGene00012644 [details] [associations]
symbol:rabx-5 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IGI]
[GO:0034058 "endosomal vesicle fusion" evidence=IMP] [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IGI]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0003677 GO:GO:0018996 GO:GO:0008270
InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769 InterPro:IPR013995
SMART:SM00167 GO:GO:0032851 GeneTree:ENSGT00530000063341
EMBL:AL031633 eggNOG:NOG301606 GO:GO:0034058 RefSeq:NP_499337.3
ProteinModelPortal:Q8I100 SMR:Q8I100 IntAct:Q8I100 STRING:Q8I100
PaxDb:Q8I100 EnsemblMetazoa:Y39A1A.5 GeneID:176481
KEGG:cel:CELE_Y39A1A.5 UCSC:Y39A1A.5 CTD:176481 WormBase:Y39A1A.5
HOGENOM:HOG000021299 InParanoid:Q8I100 OMA:LSCALEF NextBio:892764
Uniprot:Q8I100
Length = 517
Score = 334 (122.6 bits), Expect = 5.7e-30, P = 5.7e-30
Identities = 69/181 (38%), Positives = 109/181 (60%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDR-ELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLE 59
+ ++YQ +R+ H L+ + + E ++D VEKY Y + FC +E D+
Sbjct: 167 VMSYYQYLGERIGGHSLFDSPDCKVKVEDVMDQVEKYISTFCYSIFFCANH-EEEVADMS 225
Query: 60 IQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRD 119
+Q+RIR L WV A L+ + TVRD + ++++L+E+++ R+ +KL C+ C+
Sbjct: 226 LQDRIRSLHWVTAGFLETKMVFKKQTVRDKIDEAISELIEINAKRSAFEKLDCLTKSCKA 285
Query: 120 IFLLLQSSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTN 179
IF L+ S SADEFLP LI+++ + NP ++SN+ F++RF RLMSGEA YFFTN
Sbjct: 286 IFEALKESEASTSADEFLPTLIYVLFRGNPPLIQSNVKFISRFAIPARLMSGEAAYFFTN 345
Query: 180 L 180
L
Sbjct: 346 L 346
>UNIPROTKB|Q8I100 [details] [associations]
symbol:rabx-5 "Protein RABX-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002653 Pfam:PF01754 PROSITE:PS51036 SMART:SM00259
Pfam:PF02204 GO:GO:0003677 GO:GO:0018996 GO:GO:0008270
InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769 InterPro:IPR013995
SMART:SM00167 GO:GO:0032851 GeneTree:ENSGT00530000063341
EMBL:AL031633 eggNOG:NOG301606 GO:GO:0034058 RefSeq:NP_499337.3
ProteinModelPortal:Q8I100 SMR:Q8I100 IntAct:Q8I100 STRING:Q8I100
PaxDb:Q8I100 EnsemblMetazoa:Y39A1A.5 GeneID:176481
KEGG:cel:CELE_Y39A1A.5 UCSC:Y39A1A.5 CTD:176481 WormBase:Y39A1A.5
HOGENOM:HOG000021299 InParanoid:Q8I100 OMA:LSCALEF NextBio:892764
Uniprot:Q8I100
Length = 517
Score = 334 (122.6 bits), Expect = 5.7e-30, P = 5.7e-30
Identities = 69/181 (38%), Positives = 109/181 (60%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDR-ELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLE 59
+ ++YQ +R+ H L+ + + E ++D VEKY Y + FC +E D+
Sbjct: 167 VMSYYQYLGERIGGHSLFDSPDCKVKVEDVMDQVEKYISTFCYSIFFCANH-EEEVADMS 225
Query: 60 IQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRD 119
+Q+RIR L WV A L+ + TVRD + ++++L+E+++ R+ +KL C+ C+
Sbjct: 226 LQDRIRSLHWVTAGFLETKMVFKKQTVRDKIDEAISELIEINAKRSAFEKLDCLTKSCKA 285
Query: 120 IFLLLQSSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTN 179
IF L+ S SADEFLP LI+++ + NP ++SN+ F++RF RLMSGEA YFFTN
Sbjct: 286 IFEALKESEASTSADEFLPTLIYVLFRGNPPLIQSNVKFISRFAIPARLMSGEAAYFFTN 345
Query: 180 L 180
L
Sbjct: 346 L 346
>ASPGD|ASPL0000018244 [details] [associations]
symbol:AN3678 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003892 InterPro:IPR009060 Pfam:PF02845
PROSITE:PS51140 Pfam:PF02204 EMBL:BN001302 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 SUPFAM:SSF46934
EnsemblFungi:CADANIAT00005054 HOGENOM:HOG000192136 OMA:QYILRFR
Uniprot:C8V7N4
Length = 767
Score = 238 (88.8 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 49/129 (37%), Positives = 83/129 (64%)
Query: 53 DEDQDLEIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLAC 112
D ++D + +++R WV +HLD I +++ R + + +LL+++ RAP+DK+ C
Sbjct: 408 DVERDEVLAQKMRIYSWVREEHLD--IAPVSSSGRRFLNLAQQELLKINGYRAPRDKVIC 465
Query: 113 VVACCRDIFLLLQSSV-GPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSG 171
++ CC+ IF LL+++ SAD F+P LI++VL+ NP L SNI ++ RF N +L G
Sbjct: 466 ILNCCKVIFGLLRNAKKSDTSADSFIPLLIYVVLQANPEHLVSNIQYILRFRNQEKL-GG 524
Query: 172 EAGYFFTNL 180
EAGY+ ++L
Sbjct: 525 EAGYYLSSL 533
Score = 44 (20.5 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTS 52
+ +F +M +++ DVS + + + +EK M LY F P S
Sbjct: 326 ISDFLAFITNKMAACEVWRDVSDSEFDNAKEGMEKLVMNRLYTQTFSPTIPS 377
>TAIR|locus:2184727 [details] [associations]
symbol:VPS9B "AT5G09320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006810 "transport" evidence=ISS]
Pfam:PF02204 EMBL:CP002688 EMBL:AL391712 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 IPI:IPI00543083
RefSeq:NP_196494.1 UniGene:At.32529 ProteinModelPortal:Q9FY83
SMR:Q9FY83 EnsemblPlants:AT5G09320.1 GeneID:830791
KEGG:ath:AT5G09320 TAIR:At5g09320 HOGENOM:HOG000152589
InParanoid:Q9FY83 OMA:FASNTED PhylomeDB:Q9FY83
ProtClustDB:CLSN2916871 ArrayExpress:Q9FY83 Genevestigator:Q9FY83
Uniprot:Q9FY83
Length = 712
Score = 236 (88.1 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 59/188 (31%), Positives = 103/188 (54%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+Q+F+ H L++ S + + D +EKY M L+P +F T D D ++
Sbjct: 47 VQDFFYKMESAFRAHPLWSGCSDDELDNAGDGLEKYVMTKLFPRVFASN-TEDVISDEKL 105
Query: 61 QERIRQLK-WVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRD 119
++I ++ +++ ++LD N T L + K+ + AP+DKL C++ CC+
Sbjct: 106 FQKISLVQQFISPENLDIQPTFQNQTSWLLAQKELQKI---NMYNAPRDKLMCILRCCKV 162
Query: 120 IF-LLLQSSVGP----ASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAG 174
I LLL +S+ AD+FLP LI++ +K NP + SN+ ++ R+ ++L+ GEAG
Sbjct: 163 INNLLLNASIASNQNEPGADQFLPVLIYVTIKANPPQFHSNLLYIQRYRRQSKLV-GEAG 221
Query: 175 YFFTNLVS 182
Y FTN++S
Sbjct: 222 YLFTNILS 229
>TAIR|locus:2092211 [details] [associations]
symbol:VPS9A species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006810 "transport"
evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0000919
"cell plate assembly" evidence=IMP] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IMP] [GO:0042546 "cell wall biogenesis"
evidence=IMP] [GO:0048528 "post-embryonic root development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF02204 GO:GO:0005525 GO:GO:0005829
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
GO:GO:0005096 GO:GO:0043547 GO:GO:0009790 GO:GO:0005089
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
EMBL:AP000417 EMBL:AB025631 GO:GO:0042546 GO:GO:0048528
eggNOG:NOG301606 PDB:2EFC PDB:2EFD PDB:2EFE PDB:2EFH PDBsum:2EFC
PDBsum:2EFD PDBsum:2EFE PDBsum:2EFH EMBL:AY045810 EMBL:AY079338
IPI:IPI00543757 RefSeq:NP_566645.1 UniGene:At.22893
ProteinModelPortal:Q9LT31 SMR:Q9LT31 STRING:Q9LT31 PaxDb:Q9LT31
PRIDE:Q9LT31 EnsemblPlants:AT3G19770.1 GeneID:821514
KEGG:ath:AT3G19770 TAIR:At3g19770 HOGENOM:HOG000029999
InParanoid:Q9LT31 OMA:MEESEFE PhylomeDB:Q9LT31
ProtClustDB:CLSN2688573 EvolutionaryTrace:Q9LT31
Genevestigator:Q9LT31 GO:GO:0000919 Uniprot:Q9LT31
Length = 520
Score = 230 (86.0 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 57/188 (30%), Positives = 107/188 (56%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+Q F+ H L++ S ++ + D +EKY M L+ +F T + D ++
Sbjct: 50 VQEFFSKMEAAFRAHPLWSGCSEEELDSAGDGLEKYVMTKLFTRVFASN-TEEVIADEKL 108
Query: 61 QERIRQLK-WVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRD 119
+++ ++ +++ ++LD I+ T + + +L +++ +AP+DKL C++ CC+
Sbjct: 109 FQKMSLVQQFISPENLD--IQPTFQNESSWLL-AQKELQKINMYKAPRDKLVCILNCCKV 165
Query: 120 IF-LLLQSSVGP----ASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAG 174
I LLL +S+ ADEFLP LI++ +K NP +L SN+ ++ R+ ++L+ GEA
Sbjct: 166 INNLLLNASIASNENAPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRESKLV-GEAA 224
Query: 175 YFFTNLVS 182
YFFTN++S
Sbjct: 225 YFFTNILS 232
>POMBASE|SPBC4F6.10 [details] [associations]
symbol:vps901 "guanyl-nucleotide exchange factor Vps901
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006623 "protein targeting to vacuole"
evidence=ISO] InterPro:IPR003892 InterPro:IPR009060 Pfam:PF02845
PROSITE:PS51140 SMART:SM00546 Pfam:PF02204 GO:GO:0005829
GO:GO:0005096 GO:GO:0043547 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 GO:GO:0006623 SUPFAM:SSF46934 eggNOG:NOG301606
EMBL:DQ665299 PIR:T40507 HSSP:Q9UJ41 OrthoDB:EOG4NW2VJ
NextBio:20802002 Uniprot:O74396
Length = 572
Score = 227 (85.0 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 54/192 (28%), Positives = 107/192 (55%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCP-------PFTSD 53
+++F + +++E ++ +A S + + + +EK + LY LF P P +S+
Sbjct: 155 IRDFLKFINEKIEQYEPWASGSQAEIDNAKEGMEKLVLNRLYTSLFSPEIAKSGIPLSSE 214
Query: 54 EDQDLE----IQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDK 109
D+E + E++ +W+ ++LD +++++ L + + ++ + AP+DK
Sbjct: 215 HSDDVEEDRVLSEKMELFQWITEENLDIKKQKSSSKFFKLAADELRRI---NDYHAPRDK 271
Query: 110 LACVVACCRDIFLLLQSSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLM 169
+ C++ CC+ IF L++ V SAD F+P LIF+VL+ PA L SNI ++ RF + +L
Sbjct: 272 IICLLNCCKVIFSYLRNVVKEESADMFVPILIFVVLQARPAHLVSNIQYIQRFRSPEKL- 330
Query: 170 SGEAGYFFTNLV 181
+GE Y+ + L+
Sbjct: 331 TGEVMYYLSTLM 342
>DICTYBASE|DDB_G0271844 [details] [associations]
symbol:DDB_G0271844 "Rho GTPase domain containing
protein" species:44689 "Dictyostelium discoideum" [GO:0035091
"phosphatidylinositol binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007154 "cell communication" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001683
InterPro:IPR001806 InterPro:IPR020849 Pfam:PF00071 Pfam:PF00787
PROSITE:PS50195 PROSITE:PS51421 SMART:SM00312
dictyBase:DDB_G0271844 Pfam:PF02204 GO:GO:0005525 GO:GO:0007264
GO:GO:0016020 GO:GO:0003924 EMBL:AAFI02000006 GO:GO:0035091
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
Gene3D:3.30.1520.10 SUPFAM:SSF64268 eggNOG:NOG301606
RefSeq:XP_645538.1 ProteinModelPortal:Q55AI4
EnsemblProtists:DDB0233291 GeneID:8618167 KEGG:ddi:DDB_G0271844
InParanoid:Q55AI4 OMA:ENIDAKQ Uniprot:Q55AI4
Length = 1603
Score = 223 (83.6 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 50/146 (34%), Positives = 83/146 (56%)
Query: 33 VEKYSMISLYPLLFCPPFTSDEDQDLEIQERIRQLKWVNAKHLDCGIEETNATVRDLVYN 92
+E Y ++Y ++F P T + D L ER+ +L +V KHL+ I + +DL +
Sbjct: 1242 IENYLYQTVYKIVFSTPDTLERDTLLS--ERMSKLVFVEPKHLE--ISPIHCD-KDLWFT 1296
Query: 93 SMTKLLEMDSVRAPQDKLACVVACCRDIFLLLQSSVGPASADEFLPALIFLVLKMNPARL 152
+ +L ++ + +P KL CV+ CC+ I LL +S P AD+FLP LI++V+ N L
Sbjct: 1297 AQQELQALNELYSPSQKLECVLKCCKIILFLLSNSDSPGGADDFLPHLIYVVIHANVPNL 1356
Query: 153 KSNIHFVTRFCNANRLMSGEAGYFFT 178
SN F+++FC+ ++L E Y+ T
Sbjct: 1357 CSNFEFISKFCSQDQLKM-ERYYYLT 1381
>DICTYBASE|DDB_G0285073 [details] [associations]
symbol:DDB_G0285073 "vacuolar sorting protein 9
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] dictyBase:DDB_G0285073 Pfam:PF02204 EMBL:AAFI02000073
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
eggNOG:NOG301606 RefSeq:XP_639976.1 ProteinModelPortal:Q54NU1
EnsemblProtists:DDB0234179 GeneID:8624888 KEGG:ddi:DDB_G0285073
InParanoid:Q54NU1 OMA:IEESEFY Uniprot:Q54NU1
Length = 726
Score = 213 (80.0 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 50/132 (37%), Positives = 82/132 (62%)
Query: 55 DQDLEIQERIRQLKWVNAKHLDCG-IEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACV 113
++DL++ + I ++ +HLD +N ++L + + K+ ++ + P+DK+ CV
Sbjct: 256 EEDLKLFKHITIHGFLEPQHLDIQQFINSNEQRQNLAISELRKI---NTYKTPRDKMVCV 312
Query: 114 VACCRDIFLLLQS---SVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMS 170
CC+ IF LL+S + P+ ADEFLP LI++VLK NP LKSNI +V F + +R+M+
Sbjct: 313 YNCCKVIFKLLKSVNPNGNPSGADEFLPILIYVVLKSNPIMLKSNITYVNTFRDQSRMMT 372
Query: 171 GEAGYFFTNLVS 182
E +FT+LVS
Sbjct: 373 -EIACYFTHLVS 383
>CGD|CAL0006139 [details] [associations]
symbol:orf19.5533 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=IEA] [GO:0000011 "vacuole inheritance" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF02845 PROSITE:PS51140
CGD:CAL0006139 Pfam:PF02204 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 EMBL:AACQ01000034
EMBL:AACQ01000033 SUPFAM:SSF46934 eggNOG:NOG301606
RefSeq:XP_719097.1 RefSeq:XP_719214.1 ProteinModelPortal:Q5AC17
GeneID:3639113 GeneID:3639221 KEGG:cal:CaO19.12979
KEGG:cal:CaO19.5533 Uniprot:Q5AC17
Length = 765
Score = 212 (79.7 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 45/143 (31%), Positives = 80/143 (55%)
Query: 44 LLFCP-PFTSDEDQDLEIQERIRQLKWVNAKHLDCGIEE-TNATVRD----LVYNSMTKL 97
L + P P+T D +D ++ + W+N HLD + + N V++ L Y ++T+L
Sbjct: 438 LSYIPEPYTLDLQKDESFALQLEKFSWINGNHLDIDMNDLANKIVKNDQSFLEY-AITEL 496
Query: 98 LEMDSVRAPQDKLACVVACCRDIFLLLQSSVGPASADEFLPALIFLVLKMNPARLKSNIH 157
++++ RAP+DK+ C++ C+ IF L+ S +AD F+P LI ++ K L SNIH
Sbjct: 497 NKINNYRAPRDKIICILNACKIIFSYLKLSKQETNADSFIPILILVIFKAKTDHLISNIH 556
Query: 158 FVTRFCNANRLMSGEAGYFFTNL 180
++ F L+ GE Y+ +++
Sbjct: 557 YIENFRGQEWLLHGETSYYLSSI 579
>UNIPROTKB|A2RV61 [details] [associations]
symbol:gapvd1 "GTPase-activating protein and VPS9
domain-containing protein 1" species:8355 "Xenopus laevis"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0032794
"GTPase activating protein binding" evidence=ISS] [GO:0051223
"regulation of protein transport" evidence=ISS] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204
GO:GO:0005829 GO:GO:0007165 GO:GO:0016020 GO:GO:0005096
GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005768 GO:GO:0051056
GO:GO:0006897 GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GO:GO:0051223 Gene3D:1.10.506.10
PROSITE:PS00509 GO:GO:0032794 CTD:26130 HOVERGEN:HBG107936
EMBL:BC133191 RefSeq:NP_001091308.1 UniGene:Xl.19818
ProteinModelPortal:A2RV61 PRIDE:A2RV61 GeneID:100037133
KEGG:xla:100037133 Xenbase:XB-GENE-997392 Uniprot:A2RV61
Length = 1452
Score = 178 (67.7 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 49/181 (27%), Positives = 93/181 (51%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
++ F Q+ M ++ + S + + +E+ M ++ L F P +D +D +
Sbjct: 1259 VEEFLQSLYGAMAQDVIWQNASEEQLQDAQIAIERSIMNRIFKLAFNPNQDADILRDQVL 1318
Query: 61 QERIRQL-KWVNAKHLDCGIEETNATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCR 118
E I++L K V A H I E +R+ + S T++ + + + P+DK+ C++ C
Sbjct: 1319 HEHIKRLSKVVTANHRALQIPEVY--LREAPWPSAQTEIRTISAYKTPRDKVQCILRMCS 1376
Query: 119 DIFLLLQ--SSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYF 176
I LL + AD+F+P L+F+++K NP L S + +++ F + NRL+ GE Y+
Sbjct: 1377 TIMNLLSLANEYSVPGADDFVPVLVFVLIKANPTYLLSTVQYISSFYS-NRLI-GEESYW 1434
Query: 177 F 177
+
Sbjct: 1435 W 1435
>DICTYBASE|DDB_G0275413 [details] [associations]
symbol:DDB_G0275413 "DUF726 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016021 "integral to membrane" evidence=IEA]
dictyBase:DDB_G0275413 Pfam:PF02204 GO:GO:0016021 EMBL:AAFI02000013
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
eggNOG:NOG280803 InterPro:IPR007941 PANTHER:PTHR17920 Pfam:PF05277
ProtClustDB:CLSZ2846849 RefSeq:XP_643686.2
ProteinModelPortal:Q553T5 PRIDE:Q553T5 EnsemblProtists:DDB0234182
GeneID:8619953 KEGG:ddi:DDB_G0275413 InParanoid:Q553T5 OMA:CRHISKG
Uniprot:Q553T5
Length = 1268
Score = 164 (62.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 49/152 (32%), Positives = 79/152 (51%)
Query: 33 VEKYSMISLYPLLFCPPFTSDEDQDLE-IQERIRQLKWVNAKHLD-CGIEETN--ATVRD 88
+E +I +Y +F P +D+ L+ I + ++QL + +D + N A + D
Sbjct: 328 IESLILIQIYGQIF--PINKSKDKQLKSIIQYVKQLPINDYSDIDPTKLSSVNWEAAIAD 385
Query: 89 LVYNSMTKLLEMDSVRAPQDKLACVVACCRDIFLLLQSSVGPASADEFLPALIFLVLKMN 148
L S+ L E AP+DK+ C++ CR I L + G ADEF+ LI+L ++ N
Sbjct: 386 L---SLINLYE-----APRDKIVCILRSCRHISKGL-NKFGTFGADEFIGYLIYLTVQTN 436
Query: 149 PARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
P+ L SN+ F+ F A+ M E GY+F +L
Sbjct: 437 PSYLYSNLKFIELF-RASDFMVSEEGYYFISL 467
Score = 39 (18.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEK 35
+ NF + +++ + Y + +D +L +D +EK
Sbjct: 199 LSNFSKESESILKDIQTYCETFNKDLKLFIDKLEK 233
>SGD|S000004563 [details] [associations]
symbol:VPS9 "Guanine nucleotide exchange factor involved in
vacuolar transport" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000011 "vacuole
inheritance" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006623 "protein targeting to vacuole" evidence=IMP]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF02845 PROSITE:PS51140
SMART:SM00546 SGD:S000004563 Pfam:PF02204 GO:GO:0005829
EMBL:BK006946 GO:GO:0005085 GO:GO:0000011 EMBL:Z46660
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GO:GO:0006623 GO:GO:0043130 SUPFAM:SSF46934
GeneTree:ENSGT00530000063341 eggNOG:NOG301606 PDB:1P3Q PDBsum:1P3Q
OrthoDB:EOG4NW2VJ EMBL:U50142 EMBL:U20373 PIR:S49629
RefSeq:NP_013612.1 PDB:1MN3 PDBsum:1MN3 ProteinModelPortal:P54787
SMR:P54787 DIP:DIP-4526N IntAct:P54787 MINT:MINT-516456
STRING:P54787 PaxDb:P54787 PeptideAtlas:P54787 EnsemblFungi:YML097C
GeneID:854876 KEGG:sce:YML097C HOGENOM:HOG000141911 OMA:EDVCIAK
EvolutionaryTrace:P54787 NextBio:977816 Genevestigator:P54787
GermOnline:YML097C Uniprot:P54787
Length = 451
Score = 165 (63.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 46/180 (25%), Positives = 91/180 (50%)
Query: 5 YQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCP---PFTSDEDQDLEIQ 61
Y+ F + ++N K+ ++ ++ + SLY +L P D D +
Sbjct: 119 YEPF-RSLDNSKMRNAKEGMEKLIMGKLYSRCFSPSLYEILQKPLDDEHMKDLTNDDTLL 177
Query: 62 ERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIF 121
E+IR ++++ LD NA + V+ + +L +++ ++P+DK+ CV+ + IF
Sbjct: 178 EKIRHYRFISPIMLDIPDTMPNARLNKFVHLASKELGKINRFKSPRDKMVCVLNASKVIF 237
Query: 122 -LLLQSSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNL 180
LL + + AD F+P LI+ +LK L SN++++ RF + + + GE Y+ ++L
Sbjct: 238 GLLKHTKLEQNGADSFIPVLIYCILKGQVRYLVSNVNYIERFRSPD-FIRGEEEYYLSSL 296
>UNIPROTKB|A8WVM4 [details] [associations]
symbol:rme-6 "Receptor-mediated endocytosis protein 6"
species:6238 "Caenorhabditis briggsae" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0032794 "GTPase activating
protein binding" evidence=ISS] [GO:0051223 "regulation of protein
transport" evidence=ISS] InterPro:IPR001936 InterPro:IPR008936
Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204 GO:GO:0005829
GO:GO:0007165 GO:GO:0016020 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0006897 GO:GO:0030136
GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 GO:GO:0051223 Gene3D:1.10.506.10 PROSITE:PS00509
GO:GO:0032794 eggNOG:NOG275317 EMBL:HE600974 RefSeq:XP_002643315.1
ProteinModelPortal:A8WVM4 EnsemblMetazoa:CBG04130 GeneID:8585309
KEGG:cbr:CBG04130 CTD:8585309 WormBase:CBG04130
HOGENOM:HOG000154147 OMA:VETEHRR Uniprot:A8WVM4
Length = 1104
Score = 170 (64.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 55/188 (29%), Positives = 90/188 (47%)
Query: 1 MQNFYQTFAKR-MENHKL-YADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDL 58
+QN +R M+N+ +A S R + +E++ M ++Y + F P D+ +D
Sbjct: 913 LQNLLTYLRERLMQNYDWNFATESMIARAMTT--MERFVMFAVYEIAFWPNREMDQKKDK 970
Query: 59 EIQERI-RQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEM-DSVRAPQDKLACVVAC 116
+Q I + V H I E + + + S L M D+ Q+KL C+V C
Sbjct: 971 LLQSVIGKASSSVTPVHEALKIPEH--LLGEAPWPSAQAELSMLDNYVTAQEKLNCLVRC 1028
Query: 117 CRDI--FLLLQSSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAG 174
C I + L S ASAD+ P L+F+++K NP L SN+ F+ F +++ SG
Sbjct: 1029 CDVINNLVALSSKNAVASADDLTPVLVFVIIKANPRSLLSNLQFIETFAG-DQIESGRDA 1087
Query: 175 YFFTNLVS 182
Y++ N S
Sbjct: 1088 YYWVNFKS 1095
>WB|WBGene00004377 [details] [associations]
symbol:rme-6 species:6239 "Caenorhabditis elegans"
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0051056 "regulation of small
GTPase mediated signal transduction" evidence=IEA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005769 "early endosome" evidence=IDA] [GO:2000369 "regulation
of clathrin-mediated endocytosis" evidence=IMP] [GO:0017137 "Rab
GTPase binding" evidence=IPI] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IGI] [GO:0032851 "positive
regulation of Rab GTPase activity" evidence=IGI] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204
GO:GO:0005829 GO:GO:0005886 GO:GO:0007165 GO:GO:0005096
SUPFAM:SSF48350 GO:GO:0018996 GO:GO:0006897 GO:GO:2000369
GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205 GO:GO:0005769
InterPro:IPR013995 SMART:SM00167 GO:GO:0051223 GO:GO:0032851
Gene3D:1.10.506.10 PROSITE:PS00509 GO:GO:0045334 GO:GO:0032794
eggNOG:NOG275317 GeneTree:ENSGT00530000063341 HOGENOM:HOG000154147
OMA:VETEHRR EMBL:AY750054 EMBL:FO080361 PIR:T25788 PIR:T31057
RefSeq:NP_508208.2 UniGene:Cel.22673 ProteinModelPortal:Q9GYH7
SMR:Q9GYH7 DIP:DIP-25631N IntAct:Q9GYH7 MINT:MINT-1116995
STRING:Q9GYH7 PaxDb:Q9GYH7 PRIDE:Q9GYH7 EnsemblMetazoa:F49E7.1a
GeneID:180463 KEGG:cel:CELE_F49E7.1 UCSC:F49E7.1a CTD:180463
WormBase:F49E7.1a WormBase:F49E7.1b InParanoid:Q9GYH7
NextBio:909496 Uniprot:Q9GYH7
Length = 1093
Score = 166 (63.5 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 48/153 (31%), Positives = 74/153 (48%)
Query: 33 VEKYSMISLYPLLFCPPFTSDEDQDLEIQERIRQLKWVNAKHLDCGIEETNATVRDLVYN 92
+E+Y + ++Y F P +D +D ++ I ++ V D ++ + +
Sbjct: 934 IERYVIFAVYDNAFYPNRDADHHRDKLLRGTIAKVSDVVTPVNDF-LKIPEHLHGEAPWP 992
Query: 93 SMTKLLEM-DSVRAPQDKLACVVACCRDI--FLLLQSSVGPASADEFLPALIFLVLKMNP 149
S L M D QDKL CVV CC I + L S ASAD+ P L+F+++K NP
Sbjct: 993 SAQAELSMLDIYVTAQDKLNCVVRCCDVINNLVALSSKNAVASADDLTPVLVFVIIKANP 1052
Query: 150 ARLKSNIHFVTRFCNANRLMSGEAGYFFTNLVS 182
L SN+ FV F +R+ SG Y++ N S
Sbjct: 1053 RALLSNVQFVETFAG-DRIESGRDAYYWVNFKS 1084
>UNIPROTKB|Q9GYH7 [details] [associations]
symbol:rme-6 "Receptor-mediated endocytosis protein 6"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0051223 "regulation of protein transport"
evidence=ISS] [GO:0032794 "GTPase activating protein binding"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0005829 GO:GO:0005886 GO:GO:0007165
GO:GO:0005096 SUPFAM:SSF48350 GO:GO:0018996 GO:GO:0006897
GO:GO:2000369 GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205
GO:GO:0005769 InterPro:IPR013995 SMART:SM00167 GO:GO:0051223
GO:GO:0032851 Gene3D:1.10.506.10 PROSITE:PS00509 GO:GO:0045334
GO:GO:0032794 eggNOG:NOG275317 GeneTree:ENSGT00530000063341
HOGENOM:HOG000154147 OMA:VETEHRR EMBL:AY750054 EMBL:FO080361
PIR:T25788 PIR:T31057 RefSeq:NP_508208.2 UniGene:Cel.22673
ProteinModelPortal:Q9GYH7 SMR:Q9GYH7 DIP:DIP-25631N IntAct:Q9GYH7
MINT:MINT-1116995 STRING:Q9GYH7 PaxDb:Q9GYH7 PRIDE:Q9GYH7
EnsemblMetazoa:F49E7.1a GeneID:180463 KEGG:cel:CELE_F49E7.1
UCSC:F49E7.1a CTD:180463 WormBase:F49E7.1a WormBase:F49E7.1b
InParanoid:Q9GYH7 NextBio:909496 Uniprot:Q9GYH7
Length = 1093
Score = 166 (63.5 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 48/153 (31%), Positives = 74/153 (48%)
Query: 33 VEKYSMISLYPLLFCPPFTSDEDQDLEIQERIRQLKWVNAKHLDCGIEETNATVRDLVYN 92
+E+Y + ++Y F P +D +D ++ I ++ V D ++ + +
Sbjct: 934 IERYVIFAVYDNAFYPNRDADHHRDKLLRGTIAKVSDVVTPVNDF-LKIPEHLHGEAPWP 992
Query: 93 SMTKLLEM-DSVRAPQDKLACVVACCRDI--FLLLQSSVGPASADEFLPALIFLVLKMNP 149
S L M D QDKL CVV CC I + L S ASAD+ P L+F+++K NP
Sbjct: 993 SAQAELSMLDIYVTAQDKLNCVVRCCDVINNLVALSSKNAVASADDLTPVLVFVIIKANP 1052
Query: 150 ARLKSNIHFVTRFCNANRLMSGEAGYFFTNLVS 182
L SN+ FV F +R+ SG Y++ N S
Sbjct: 1053 RALLSNVQFVETFAG-DRIESGRDAYYWVNFKS 1084
>UNIPROTKB|E1C268 [details] [associations]
symbol:GAPVD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0032794 "GTPase activating protein binding" evidence=IEA]
[GO:0051223 "regulation of protein transport" evidence=IEA]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0005829 GO:GO:0007165 GO:GO:0005096
GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005085
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GO:GO:0051223 Gene3D:1.10.506.10 GeneTree:ENSGT00530000063341
OMA:HSYPERL EMBL:AADN02026317 IPI:IPI00583672
Ensembl:ENSGALT00000001466 Uniprot:E1C268
Length = 1440
Score = 165 (63.1 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 49/181 (27%), Positives = 91/181 (50%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+++F Q M ++ + S + + +E+ M ++ L F P D +D +
Sbjct: 1247 VEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVL 1306
Query: 61 QERIRQL-KWVNAKHLDCGIEETNATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCR 118
E I++L K V A H I E +R+ + S +++ + + + P+DK+ C++ C
Sbjct: 1307 HEHIQRLSKVVTANHKALQIPEVY--LREAPWPSAQSEIRTISAYKTPRDKVQCILRMCS 1364
Query: 119 DIFLLLQ--SSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYF 176
I LL + AD+F+P L+F+++K NP L S + +++ F AN L SGE Y+
Sbjct: 1365 TIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFY-ANCL-SGEESYW 1422
Query: 177 F 177
+
Sbjct: 1423 W 1423
>UNIPROTKB|F8W9S7 [details] [associations]
symbol:GAPVD1 "GTPase-activating protein and VPS9
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204
GO:GO:0007165 GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350
GO:GO:0051056 GO:GO:0005622 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 Gene3D:1.10.506.10 EMBL:AL627223
EMBL:AL354710 HGNC:HGNC:23375 ChiTaRS:GAPVD1 IPI:IPI00946050
ProteinModelPortal:F8W9S7 SMR:F8W9S7 Ensembl:ENST00000394083
ArrayExpress:F8W9S7 Bgee:F8W9S7 Uniprot:F8W9S7
Length = 1412
Score = 160 (61.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 46/181 (25%), Positives = 90/181 (49%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+++F Q M ++ + S + + +E+ M ++ L F P D +D +
Sbjct: 1219 VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVL 1278
Query: 61 QERIRQL-KWVNAKHLDCGIEETNATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCR 118
E I++L K V A H I E +R+ + S +++ + + + P+DK+ C++ C
Sbjct: 1279 HEHIQRLSKVVTANHRALQIPEVY--LREAPWPSAQSEIRTISAYKTPRDKVQCILRMCS 1336
Query: 119 DIFLLLQ--SSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYF 176
I LL + AD+F+P L+F+++K NP L S + +++ F + +SGE Y+
Sbjct: 1337 TIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYAS--CLSGEESYW 1394
Query: 177 F 177
+
Sbjct: 1395 W 1395
>UNIPROTKB|E2RA33 [details] [associations]
symbol:GAPVD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005622 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 Gene3D:1.10.506.10
GeneTree:ENSGT00530000063341 EMBL:AAEX03006882
Ensembl:ENSCAFT00000032150 Uniprot:E2RA33
Length = 1416
Score = 160 (61.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 46/181 (25%), Positives = 90/181 (49%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+++F Q M ++ + S + + +E+ M ++ L F P D +D +
Sbjct: 1223 VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVL 1282
Query: 61 QERIRQL-KWVNAKHLDCGIEETNATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCR 118
E I++L K V A H I E +R+ + S +++ + + + P+DK+ C++ C
Sbjct: 1283 HEHIQRLSKVVTANHRALQIPEVY--LREAPWPSAQSEIRTISAYKTPRDKVQCILRMCS 1340
Query: 119 DIFLLLQ--SSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYF 176
I LL + AD+F+P L+F+++K NP L S + +++ F + +SGE Y+
Sbjct: 1341 TIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYAS--CLSGEESYW 1398
Query: 177 F 177
+
Sbjct: 1399 W 1399
>UNIPROTKB|E2RA13 [details] [associations]
symbol:GAPVD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005622 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 Gene3D:1.10.506.10
GeneTree:ENSGT00530000063341 EMBL:AAEX03006882
Ensembl:ENSCAFT00000032152 Uniprot:E2RA13
Length = 1460
Score = 160 (61.4 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 46/181 (25%), Positives = 90/181 (49%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+++F Q M ++ + S + + +E+ M ++ L F P D +D +
Sbjct: 1267 VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVL 1326
Query: 61 QERIRQL-KWVNAKHLDCGIEETNATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCR 118
E I++L K V A H I E +R+ + S +++ + + + P+DK+ C++ C
Sbjct: 1327 HEHIQRLSKVVTANHRALQIPEVY--LREAPWPSAQSEIRTISAYKTPRDKVQCILRMCS 1384
Query: 119 DIFLLLQ--SSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYF 176
I LL + AD+F+P L+F+++K NP L S + +++ F + +SGE Y+
Sbjct: 1385 TIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYAS--CLSGEESYW 1442
Query: 177 F 177
+
Sbjct: 1443 W 1443
>RGD|1307479 [details] [associations]
symbol:Gapvd1 "GTPase activating protein and VPS9 domains 1"
species:10116 "Rattus norvegicus" [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO] [GO:0005096 "GTPase
activator activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISO] [GO:0007165
"signal transduction" evidence=IEA] [GO:0032794 "GTPase activating
protein binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0051223 "regulation
of protein transport" evidence=ISO] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 RGD:1307479
Pfam:PF02204 GO:GO:0005829 GO:GO:0007165 GO:GO:0005096
GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005085
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GO:GO:0051223 Gene3D:1.10.506.10 GeneTree:ENSGT00530000063341
OrthoDB:EOG4548XR IPI:IPI00949820 Ensembl:ENSRNOT00000066961
UCSC:RGD:1307479 ArrayExpress:D4A022 Uniprot:D4A022
Length = 1463
Score = 160 (61.4 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 46/181 (25%), Positives = 90/181 (49%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+++F Q M ++ + S + + +E+ M ++ L F P D +D +
Sbjct: 1270 VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVL 1329
Query: 61 QERIRQL-KWVNAKHLDCGIEETNATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCR 118
E I++L K V A H I E +R+ + S +++ + + + P+DK+ C++ C
Sbjct: 1330 HEHIQRLSKVVTANHRALQIPEVY--LREAPWPSAQSEIRTISAYKTPRDKVQCILRMCS 1387
Query: 119 DIFLLLQ--SSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYF 176
I LL + AD+F+P L+F+++K NP L S + +++ F + +SGE Y+
Sbjct: 1388 TIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYAS--CLSGEESYW 1445
Query: 177 F 177
+
Sbjct: 1446 W 1446
>UNIPROTKB|Q14C86 [details] [associations]
symbol:GAPVD1 "GTPase-activating protein and VPS9
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0032794 "GTPase activating
protein binding" evidence=IMP] [GO:0051223 "regulation of protein
transport" evidence=IMP] InterPro:IPR001936 InterPro:IPR008936
Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204 GO:GO:0005829
GO:GO:0007165 GO:GO:0016020 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0005768 EMBL:CH471090 GO:GO:0051056
GO:GO:0006897 GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GO:GO:0051223 Gene3D:1.10.506.10
PROSITE:PS00509 GO:GO:0032794 CTD:26130 eggNOG:NOG275317
HOVERGEN:HBG107936 OMA:HSYPERL EMBL:DQ233254 EMBL:AB040954
EMBL:AL627223 EMBL:AL354710 EMBL:BC013635 EMBL:BC021119
EMBL:BC114937 EMBL:BC114962 EMBL:AK000126 EMBL:AL080196
EMBL:AL834325 IPI:IPI00292753 IPI:IPI00302156 IPI:IPI00852719
IPI:IPI00873087 IPI:IPI00883910 IPI:IPI00888069 PIR:T12506
RefSeq:NP_056450.2 UniGene:Hs.495134 ProteinModelPortal:Q14C86
SMR:Q14C86 IntAct:Q14C86 MINT:MINT-1631145 STRING:Q14C86
DMDM:172046859 PaxDb:Q14C86 PRIDE:Q14C86 Ensembl:ENST00000265956
Ensembl:ENST00000297933 Ensembl:ENST00000312123
Ensembl:ENST00000394104 Ensembl:ENST00000394105
Ensembl:ENST00000470056 Ensembl:ENST00000495955 GeneID:26130
KEGG:hsa:26130 UCSC:uc004bpp.3 UCSC:uc004bpq.3 UCSC:uc004bpr.3
UCSC:uc004bps.3 UCSC:uc010mwx.3 UCSC:uc010mwy.1
GeneCards:GC09P128024 H-InvDB:HIX0008383 HGNC:HGNC:23375
HPA:HPA029386 HPA:HPA029387 MIM:611714 neXtProt:NX_Q14C86
PharmGKB:PA142671748 ChiTaRS:GAPVD1 GenomeRNAi:26130 NextBio:48153
PMAP-CutDB:Q14C86 ArrayExpress:Q14C86 Bgee:Q14C86
Genevestigator:Q14C86 Uniprot:Q14C86
Length = 1478
Score = 160 (61.4 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 46/181 (25%), Positives = 90/181 (49%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+++F Q M ++ + S + + +E+ M ++ L F P D +D +
Sbjct: 1285 VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVL 1344
Query: 61 QERIRQL-KWVNAKHLDCGIEETNATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCR 118
E I++L K V A H I E +R+ + S +++ + + + P+DK+ C++ C
Sbjct: 1345 HEHIQRLSKVVTANHRALQIPEVY--LREAPWPSAQSEIRTISAYKTPRDKVQCILRMCS 1402
Query: 119 DIFLLLQ--SSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYF 176
I LL + AD+F+P L+F+++K NP L S + +++ F + +SGE Y+
Sbjct: 1403 TIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYAS--CLSGEESYW 1460
Query: 177 F 177
+
Sbjct: 1461 W 1461
>UNIPROTKB|F1RS34 [details] [associations]
symbol:GAPVD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051223 "regulation of protein transport" evidence=IEA]
[GO:0032794 "GTPase activating protein binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0005096 "GTPase
activator activity" evidence=IEA] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204
GO:GO:0005829 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005085 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 GO:GO:0051223
Gene3D:1.10.506.10 GeneTree:ENSGT00530000063341 OMA:HSYPERL
EMBL:CU929944 EMBL:FP312771 Ensembl:ENSSSCT00000006160
Uniprot:F1RS34
Length = 1478
Score = 160 (61.4 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 46/181 (25%), Positives = 90/181 (49%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+++F Q M ++ + S + + +E+ M ++ L F P D +D +
Sbjct: 1285 VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVL 1344
Query: 61 QERIRQL-KWVNAKHLDCGIEETNATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCR 118
E I++L K V A H I E +R+ + S +++ + + + P+DK+ C++ C
Sbjct: 1345 HEHIQRLSKVVTANHRALQIPEVY--LREAPWPSAQSEIRTISAYKTPRDKVQCILRMCS 1402
Query: 119 DIFLLLQ--SSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYF 176
I LL + AD+F+P L+F+++K NP L S + +++ F + +SGE Y+
Sbjct: 1403 TIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYAS--CLSGEESYW 1460
Query: 177 F 177
+
Sbjct: 1461 W 1461
>UNIPROTKB|E2RA32 [details] [associations]
symbol:GAPVD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0005622 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 Gene3D:1.10.506.10
GeneTree:ENSGT00530000063341 OMA:HSYPERL EMBL:AAEX03006882
Ensembl:ENSCAFT00000032151 Uniprot:E2RA32
Length = 1480
Score = 160 (61.4 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 46/181 (25%), Positives = 90/181 (49%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+++F Q M ++ + S + + +E+ M ++ L F P D +D +
Sbjct: 1287 VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVL 1346
Query: 61 QERIRQL-KWVNAKHLDCGIEETNATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCR 118
E I++L K V A H I E +R+ + S +++ + + + P+DK+ C++ C
Sbjct: 1347 HEHIQRLSKVVTANHRALQIPEVY--LREAPWPSAQSEIRTISAYKTPRDKVQCILRMCS 1404
Query: 119 DIFLLLQ--SSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYF 176
I LL + AD+F+P L+F+++K NP L S + +++ F + +SGE Y+
Sbjct: 1405 TIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYAS--CLSGEESYW 1462
Query: 177 F 177
+
Sbjct: 1463 W 1463
>MGI|MGI:1913941 [details] [associations]
symbol:Gapvd1 "GTPase activating protein and VPS9 domains 1"
species:10090 "Mus musculus" [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;IMP] [GO:0005096 "GTPase
activator activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005622 "intracellular" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005829 "cytosol" evidence=ISO;IDA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO;IMP]
[GO:0050790 "regulation of catalytic activity" evidence=IMP]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051223 "regulation of protein
transport" evidence=ISO;IMP] InterPro:IPR001936 InterPro:IPR008936
Pfam:PF00616 PROSITE:PS50018 MGI:MGI:1913941 Pfam:PF02204
GO:GO:0005829 GO:GO:0007165 GO:GO:0016020 GO:GO:0005096
GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005768 GO:GO:0051056
GO:GO:0006897 GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GO:GO:0051223 Gene3D:1.10.506.10
PROSITE:PS00509 EMBL:AL929106 GO:GO:0032794 CTD:26130
eggNOG:NOG275317 GeneTree:ENSGT00530000063341 HOVERGEN:HBG107936
OMA:HSYPERL ChiTaRS:GAPVD1 EMBL:EF155419 EMBL:AK129381
EMBL:AK014474 EMBL:AK088851 EMBL:AK003521 EMBL:AK134776
EMBL:AK150026 EMBL:AK165047 EMBL:AL845262 EMBL:BC031478
EMBL:BC043715 EMBL:BC048847 EMBL:BC057164 EMBL:BC060123
IPI:IPI00406596 IPI:IPI00889216 IPI:IPI00889225 IPI:IPI00889231
IPI:IPI00889244 IPI:IPI00889253 RefSeq:NP_079985.2
UniGene:Mm.156452 UniGene:Mm.393397 ProteinModelPortal:Q6PAR5
SMR:Q6PAR5 STRING:Q6PAR5 PhosphoSite:Q6PAR5 PaxDb:Q6PAR5
PRIDE:Q6PAR5 Ensembl:ENSMUST00000028224 Ensembl:ENSMUST00000102800
Ensembl:ENSMUST00000113099 GeneID:66691 KEGG:mmu:66691
UCSC:uc008jiq.1 UCSC:uc008jir.1 UCSC:uc012bug.1 InParanoid:Q6PAR5
OrthoDB:EOG4548XR NextBio:322389 Bgee:Q6PAR5 CleanEx:MM_GAPVD1
Genevestigator:Q6PAR5 Uniprot:Q6PAR5
Length = 1458
Score = 158 (60.7 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 45/158 (28%), Positives = 82/158 (51%)
Query: 24 QDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQERIRQL-KWVNAKHLDCGIEET 82
QD +L +E+ M ++ L F P D +D + E I++L K V A H I E
Sbjct: 1291 QDAQLA---IERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEV 1347
Query: 83 NATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCRDIFLLLQ--SSVGPASADEFLPA 139
+R+ + S +++ + + + P+DK+ C++ C I LL + AD+F+P
Sbjct: 1348 Y--LREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPV 1405
Query: 140 LIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
L+F+++K NP L S + +++ F + +SGE Y++
Sbjct: 1406 LVFVLIKANPPCLLSTVQYISSFYAS--CLSGEESYWW 1441
>ZFIN|ZDB-GENE-040718-117 [details] [associations]
symbol:gapvd1 "GTPase activating protein and VPS9
domains 1" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=IEA] [GO:0005096 "GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616
PROSITE:PS50018 Pfam:PF02204 ZFIN:ZDB-GENE-040718-117 GO:GO:0007165
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0051056
GO:GO:0005622 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 Gene3D:1.10.506.10 GeneTree:ENSGT00530000063341
EMBL:BX005399 EMBL:BX511073 IPI:IPI00920790
Ensembl:ENSDART00000112854 Uniprot:E7F237
Length = 1472
Score = 158 (60.7 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 49/165 (29%), Positives = 87/165 (52%)
Query: 18 YA-DVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQERIRQL-KWVNAKHL 75
YA + QD ++ +E+ M ++ L F P D +D E I++L + V+A H
Sbjct: 1298 YASEEQLQDAQMA---IERSVMNRIFKLAFYPNQDGDIHRDELFHEHIQRLSRVVSANHK 1354
Query: 76 DCGIEETNATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCRDIFLLLQSSVGPA--S 132
I E +++ + S ++ +++ + P+DK+ C++ C I LL + A
Sbjct: 1355 ALQIPEVY--LKEAPWPSAQAEIKTINAYKTPRDKVQCILRMCSTIMNLLSLANEDAVPG 1412
Query: 133 ADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
AD+F+P L+F+++K NP L S I ++ F A+RL SGE Y++
Sbjct: 1413 ADDFVPVLVFVLIKANPPCLLSTIQYINNFY-ASRL-SGEECYWW 1455
>UNIPROTKB|A5D794 [details] [associations]
symbol:GAPVD1 "GTPase-activating protein and VPS9
domain-containing protein 1" species:9913 "Bos taurus" [GO:0051223
"regulation of protein transport" evidence=ISS] [GO:0032794 "GTPase
activating protein binding" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0016020 "membrane" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616
PROSITE:PS50018 Pfam:PF02204 GO:GO:0005829 GO:GO:0007165
GO:GO:0016020 GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350
GO:GO:0005768 GO:GO:0051056 GO:GO:0006897 GO:GO:0005085
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
GO:GO:0051223 Gene3D:1.10.506.10 PROSITE:PS00509 GO:GO:0032794
EMBL:BC140474 IPI:IPI00704893 RefSeq:NP_001095990.1
UniGene:Bt.20982 ProteinModelPortal:A5D794 PRIDE:A5D794
Ensembl:ENSBTAT00000015341 GeneID:539646 KEGG:bta:539646 CTD:26130
eggNOG:NOG275317 GeneTree:ENSGT00530000063341 HOGENOM:HOG000038022
HOVERGEN:HBG107936 OMA:HSYPERL NextBio:20878130 Uniprot:A5D794
Length = 1413
Score = 157 (60.3 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 45/181 (24%), Positives = 90/181 (49%)
Query: 1 MQNFYQTFAKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEI 60
+++F Q M ++ + S + + +E+ M ++ L F P D +D +
Sbjct: 1220 VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVL 1279
Query: 61 QERIRQL-KWVNAKHLDCGIEETNATVRDLVYNS-MTKLLEMDSVRAPQDKLACVVACCR 118
E I++L K V A H I E +++ + S +++ + + + P+DK+ C++ C
Sbjct: 1280 HEHIQRLSKVVTANHRALQIPEVY--LKEAPWPSAQSEIRTISAYKTPRDKVQCILRMCS 1337
Query: 119 DIFLLLQ--SSVGPASADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYF 176
I LL + AD+F+P L+F+++K NP L S + +++ F + +SGE Y+
Sbjct: 1338 TIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYAS--CLSGEESYW 1395
Query: 177 F 177
+
Sbjct: 1396 W 1396
>DICTYBASE|DDB_G0289495 [details] [associations]
symbol:DDB_G0289495 "vacuolar sorting protein 9
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] dictyBase:DDB_G0289495 Pfam:PF02204 EMBL:AAFI02000141
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
eggNOG:NOG301606 RefSeq:XP_636178.1 ProteinModelPortal:Q54HF9
EnsemblProtists:DDB0234181 GeneID:8627165 KEGG:ddi:DDB_G0289495
InParanoid:Q54HF9 OMA:YLVECIN Uniprot:Q54HF9
Length = 1197
Score = 152 (58.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 48/181 (26%), Positives = 93/181 (51%)
Query: 8 FAKRMENHKLYADVSAQDRELLLDY----VEKYSMISLYPLLFCPPFT-SDEDQDLEIQE 62
F M+N +Q E L+Y +++Y + +Y +F P + +DQDL +
Sbjct: 635 FVDNMQNTLTLDPQWSQSSEEELNYSSHHLQQYVLEKIYDYVFQPSEEEAKKDQDLSML- 693
Query: 63 RIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIFL 122
I +L ++ +H++ I + + Y + LL+++ ++ + K+ ++ CC+ I
Sbjct: 694 -IDKLSFITLEHMEIPIYGFSEA---MWYKAGKYLLKINFTQSCRHKVMYIMKCCKTILK 749
Query: 123 LLQSSVGPAS-ADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNLV 181
+ + S AD LP LI+++LK NP L SN+ F+++F +++ EA Y+ T L+
Sbjct: 750 HFSTHLKELSGADFLLPNLIWVLLKTNPPFLHSNVIFISKFSDSS---DSEAIYYLTQLI 806
Query: 182 S 182
S
Sbjct: 807 S 807
>UNIPROTKB|Q29HW3 [details] [associations]
symbol:GA14078 "Receptor-mediated endocytosis protein 6
homolog" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0032794
"GTPase activating protein binding" evidence=ISS] [GO:0051223
"regulation of protein transport" evidence=ISS] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018 Pfam:PF02204
GO:GO:0005829 GO:GO:0007165 GO:GO:0016020 GO:GO:0005096
GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0051056 GO:GO:0006897
GO:GO:0005085 InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995
SMART:SM00167 GO:GO:0051223 EMBL:CH379064 Gene3D:1.10.506.10
PROSITE:PS00509 GO:GO:0032794 eggNOG:NOG275317 InterPro:IPR024767
Pfam:PF12871 OrthoDB:EOG4KKWHS RefSeq:XP_001354590.2 GeneID:4814905
KEGG:dpo:Dpse_GA14078 FlyBase:FBgn0074109 InParanoid:Q29HW3
Uniprot:Q29HW3
Length = 1774
Score = 151 (58.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 41/154 (26%), Positives = 77/154 (50%)
Query: 33 VEKYSMISLYPLLFCPPFTSDEDQDLEIQERIRQL-KWVNAKHLDCGIEETNATVRDLVY 91
+E+ + +Y + P +D +D + I +L ++V+ H I + +
Sbjct: 1614 IERMLLELMYQQVMFPNEDADVSRDTVLSAHIGKLQRFVHPAHPALCIAQEYLGEAPWTF 1673
Query: 92 NSMTKLLEMDSVRAPQDKLACVVACCRDIFLLLQSSVG--PASADEFLPALIFLVLKMNP 149
+ +L M + + P++KL C++ C I LL+ S G PA AD+ LP LI++V+ NP
Sbjct: 1674 -AQQQLCHMAAYKTPREKLQCIINCISSIMSLLRMSCGRVPA-ADDLLPVLIYVVIMANP 1731
Query: 150 ARLKSNIHFVTRFCNANRLMSGEAGYFFTNLVSI 183
L S + +++ C R + GE +++T S+
Sbjct: 1732 PYLLSTVEYIS--CFLGRKLDGENEFYWTLFGSV 1763
>FB|FBgn0030286 [details] [associations]
symbol:CG1657 species:7227 "Drosophila melanogaster"
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0051056 "regulation
of small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001936 InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
Pfam:PF02204 GO:GO:0005829 GO:GO:0007165 GO:GO:0016020
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 EMBL:AE014298
GO:GO:0051056 GO:GO:0006897 GO:GO:0005085 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 GO:GO:0051223
Gene3D:1.10.506.10 PROSITE:PS00509 GO:GO:0032794 eggNOG:NOG275317
GeneTree:ENSGT00530000063341 InterPro:IPR024767 Pfam:PF12871
EMBL:AY061391 EMBL:EU706774 EMBL:EU706775 EMBL:EU706776
EMBL:EU706777 EMBL:EU706778 EMBL:EU706779 EMBL:EU706780
EMBL:EU706781 EMBL:EU706782 EMBL:EU706783 EMBL:EU706784
EMBL:EU706785 EMBL:EU706786 EMBL:EU706787 EMBL:EU706788
RefSeq:NP_572704.1 UniGene:Dm.132 ProteinModelPortal:Q9VZ08
SMR:Q9VZ08 PaxDb:Q9VZ08 EnsemblMetazoa:FBtr0073448 GeneID:32070
KEGG:dme:Dmel_CG1657 UCSC:CG1657-RA FlyBase:FBgn0030286
InParanoid:Q9VZ08 OMA:IISDTWS OrthoDB:EOG4KKWHS PhylomeDB:Q9VZ08
ChiTaRS:CG1657 GenomeRNAi:32070 NextBio:776661 Bgee:Q9VZ08
Uniprot:Q9VZ08
Length = 1712
Score = 147 (56.8 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 40/154 (25%), Positives = 77/154 (50%)
Query: 33 VEKYSMISLYPLLFCPPFTSDEDQDLEIQERIRQL-KWVNAKHLDCGIEETNATVRDLVY 91
+E+ + +Y + P +D +D + I +L ++V+ H I + +
Sbjct: 1552 IERMLLEQMYEQVMFPNEDADVSRDEVLSAHIGKLQRFVHPAHPALCIAQEYLGEAPWTF 1611
Query: 92 NSMTKLLEMDSVRAPQDKLACVVACCRDIFLLLQSSVG--PASADEFLPALIFLVLKMNP 149
+ +L M + + P++KL C++ C I LL+ S G PA AD+ LP LI++V+ NP
Sbjct: 1612 -AQQQLCHMAAYKTPREKLQCIINCISSIMSLLRMSSGRVPA-ADDLLPVLIYVVIMANP 1669
Query: 150 ARLKSNIHFVTRFCNANRLMSGEAGYFFTNLVSI 183
L S + +++ C + + GE +++T S+
Sbjct: 1670 PYLLSTVEYIS--CFLGKKLEGEDEFYWTLFGSV 1701
>DICTYBASE|DDB_G0272038 [details] [associations]
symbol:rgfA "Vps9 domain-containing protein RgfA"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0272038 Pfam:PF02204 EMBL:AAFI02000007
InterPro:IPR003123 PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167
RefSeq:XP_645360.1 ProteinModelPortal:Q55AA6
EnsemblProtists:DDB0234180 GeneID:8618249 KEGG:ddi:DDB_G0272038
eggNOG:NOG281184 InParanoid:Q55AA6 Uniprot:Q55AA6
Length = 715
Score = 133 (51.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 43/166 (25%), Positives = 85/166 (51%)
Query: 22 SAQDRELLL-DYVEKYSMISLYPLLFCPPFTSDE--DQDLEIQERIRQLKWVNAKHLDCG 78
S + E+++ +++E+Y LY +F +S E +D + E I + + + +LD
Sbjct: 407 SINEIEIIIYEFMEQYIASRLYRRIF----SSQEAIQKDTLLCEHISRFQHITPSNLD-- 460
Query: 79 IEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDIFLLLQSSVGPA--SADEF 136
I ++ + + L +LL + ++P++KL C+ + +F LL + P+ AD
Sbjct: 461 INDSIISTQFLE-QIQEELLYISIFKSPREKLMCIKKSFKLLFQLLSKTQLPSVVGADLL 519
Query: 137 LPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFFTNLVS 182
LP +IF ++K N L SN+ F++ F + L+ E YF +++
Sbjct: 520 LPIVIFCLIKSNLPFLWSNLQFISLFRDPT-LIESETNYFLVTMIT 564
>ASPGD|ASPL0000000759 [details] [associations]
symbol:AN5920 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
Pfam:PF02204 EMBL:BN001301 InterPro:IPR003123 PROSITE:PS51205
EMBL:AACD01000101 OrthoDB:EOG4FV07T eggNOG:NOG261946
RefSeq:XP_663524.1 ProteinModelPortal:Q5B0L0
EnsemblFungi:CADANIAT00007113 GeneID:2870989 KEGG:ani:AN5920.2
HOGENOM:HOG000163647 OMA:GETAYCL Uniprot:Q5B0L0
Length = 698
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 46/183 (25%), Positives = 84/183 (45%)
Query: 9 AKRMENHKLYADVSAQDRELLLDYVEKYSMISLYPLLFCPPFTSDEDQDLEIQERIRQLK 68
A + ++ + A + L + VE+ S+Y ++ T DE +D +++ + L
Sbjct: 177 ASEVTEKRIARKLLASKQVSLEEAVERRVCESIYDKIWRHKSTLDEVRDEKLRSKTAALL 236
Query: 69 WVNAKHLDCGI--------EETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCRDI 120
V + G+ E++ D + L++M+ R P KL + A + I
Sbjct: 237 LVGINLNELGVDIDITAIDEKSQKDADDCFSTARDSLMKMNEERYPLGKLRHLAASHKAI 296
Query: 121 FLLLQSSV-GPASADEFLPALIFLVLKMNPARLK--SNIHFVTRFCNANRLMSGEAGYFF 177
L + +SADE LPALI+ ++ P + SN+ F+ RF ++++ +GE Y
Sbjct: 297 VDALTKLLPSSSSADEILPALIYTLVTCPPEGINVISNLLFIQRFRTSSKV-NGETAYCL 355
Query: 178 TNL 180
TNL
Sbjct: 356 TNL 358
>UNIPROTKB|E7EPJ1 [details] [associations]
symbol:RIN2 "Ras and Rab interactor 2" species:9606 "Homo
sapiens" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000159 InterPro:IPR000980 Pfam:PF00788 PROSITE:PS50200
SMART:SM00252 SMART:SM00314 Pfam:PF02204 GO:GO:0007165
Gene3D:3.30.505.10 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 EMBL:AL049538 EMBL:AL132821
HGNC:HGNC:18750 ChiTaRS:RIN2 IPI:IPI00827607
ProteinModelPortal:E7EPJ1 SMR:E7EPJ1 Ensembl:ENST00000440354
UCSC:uc010gcu.2 ArrayExpress:E7EPJ1 Bgee:E7EPJ1 Uniprot:E7EPJ1
Length = 462
Score = 113 (44.8 bits), Expect = 0.00021, P = 0.00021
Identities = 27/122 (22%), Positives = 64/122 (52%)
Query: 59 EIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCR 118
+++E ++ ++ N + L G+ D V K + M + +P+ K+ ++ C+
Sbjct: 190 QLKENLQLVRQRNPQEL--GVFAPTPDFVD-VEKIKVKFMTMQKMYSPEKKVMLLLRVCK 246
Query: 119 DIFLLLQSSVGPA-SADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
I+ +++++ G AD+FLP L +++ + + L + I ++ + + L+ GE GY+
Sbjct: 247 LIYTVMENNSGRMYGADDFLPVLTYVIAQCDMLELDTEIEYMMELLDPS-LLHGEGGYYL 305
Query: 178 TN 179
T+
Sbjct: 306 TS 307
>UNIPROTKB|D3ZZH1 [details] [associations]
symbol:Rin2 "Protein Rin2" species:10116 "Rattus
norvegicus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000159 InterPro:IPR000980 Pfam:PF00788 PROSITE:PS50001
PROSITE:PS50200 SMART:SM00252 SMART:SM00314 RGD:1305873
Pfam:PF02204 GO:GO:0007165 Gene3D:3.30.505.10 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 IPI:IPI00950289
ProteinModelPortal:D3ZZH1 Ensembl:ENSRNOT00000068706
ArrayExpress:D3ZZH1 Uniprot:D3ZZH1
Length = 857
Score = 113 (44.8 bits), Expect = 0.00048, P = 0.00048
Identities = 26/122 (21%), Positives = 66/122 (54%)
Query: 59 EIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCR 118
+++E ++ ++ N + L G+ + +L + K + M + +P+ K+ ++ C+
Sbjct: 586 QLKENLQLVRQRNPQEL--GVFAPTPDLMELEKIKL-KFMTMQKMYSPEKKVMLLLRVCK 642
Query: 119 DIFLLLQSSVGPA-SADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
I+ +++++ G AD+FLP L +++ + + L + I ++ + + L+ GE GY+
Sbjct: 643 LIYTVMENNSGRMYGADDFLPVLTYVIAQCDMLELDTEIEYMMELLDPS-LLHGEGGYYL 701
Query: 178 TN 179
T+
Sbjct: 702 TS 703
>RGD|1305873 [details] [associations]
symbol:Rin2 "Ras and Rab interactor 2" species:10116 "Rattus
norvegicus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000159 InterPro:IPR000980 Pfam:PF00788 PROSITE:PS50001
PROSITE:PS50200 SMART:SM00252 SMART:SM00314 RGD:1305873
Pfam:PF02204 GO:GO:0007165 Gene3D:3.30.505.10 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 IPI:IPI00364517
Ensembl:ENSRNOT00000013957 UCSC:RGD:1305873 ArrayExpress:F1LWQ1
Uniprot:F1LWQ1
Length = 888
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 26/122 (21%), Positives = 66/122 (54%)
Query: 59 EIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCR 118
+++E ++ ++ N + L G+ + +L + K + M + +P+ K+ ++ C+
Sbjct: 617 QLKENLQLVRQRNPQEL--GVFAPTPDLMELEKIKL-KFMTMQKMYSPEKKVMLLLRVCK 673
Query: 119 DIFLLLQSSVGPA-SADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
I+ +++++ G AD+FLP L +++ + + L + I ++ + + L+ GE GY+
Sbjct: 674 LIYTVMENNSGRMYGADDFLPVLTYVIAQCDMLELDTEIEYMMELLDPS-LLHGEGGYYL 732
Query: 178 TN 179
T+
Sbjct: 733 TS 734
>UNIPROTKB|Q8WYP3 [details] [associations]
symbol:RIN2 "Ras and Rab interactor 2" species:9606 "Homo
sapiens" [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005083 "small GTPase regulator activity"
evidence=NAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=NAS] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000159
InterPro:IPR000980 Pfam:PF00788 PROSITE:PS50001 PROSITE:PS50200
SMART:SM00252 SMART:SM00314 Pfam:PF02204 GO:GO:0005737
GO:GO:0007264 GO:GO:0005096 GO:GO:0043547 Gene3D:3.30.505.10
GO:GO:0006897 InterPro:IPR003123 PROSITE:PS51205 GO:GO:0017112
InterPro:IPR013995 SMART:SM00167 EMBL:AL049538 CleanEx:HS_RASSF4
EMBL:AB060339 EMBL:AL132821 EMBL:AK094884 EMBL:AL136924 EMBL:M37190
IPI:IPI00103752 IPI:IPI00549715 PIR:B38637 RefSeq:NP_001229510.1
RefSeq:NP_061866.1 UniGene:Hs.472270 ProteinModelPortal:Q8WYP3
SMR:Q8WYP3 IntAct:Q8WYP3 MINT:MINT-1493616 STRING:Q8WYP3
PhosphoSite:Q8WYP3 DMDM:28201876 PaxDb:Q8WYP3 PRIDE:Q8WYP3
Ensembl:ENST00000255006 GeneID:54453 KEGG:hsa:54453 UCSC:uc002wro.2
UCSC:uc010gcv.2 CTD:54453 GeneCards:GC20P019818 HGNC:HGNC:18750
HPA:HPA034641 MIM:610222 MIM:613075 neXtProt:NX_Q8WYP3
Orphanet:217335 PharmGKB:PA38672 eggNOG:NOG257110
HOVERGEN:HBG023719 InParanoid:Q8WYP3 OMA:FHMADGS OrthoDB:EOG46DM2M
ChiTaRS:RIN2 GenomeRNAi:54453 NextBio:56681 ArrayExpress:Q8WYP3
Bgee:Q8WYP3 CleanEx:HS_RIN2 Genevestigator:Q8WYP3
GermOnline:ENSG00000132669 Uniprot:Q8WYP3
Length = 895
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 27/122 (22%), Positives = 64/122 (52%)
Query: 59 EIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCR 118
+++E ++ ++ N + L G+ D V K + M + +P+ K+ ++ C+
Sbjct: 623 QLKENLQLVRQRNPQEL--GVFAPTPDFVD-VEKIKVKFMTMQKMYSPEKKVMLLLRVCK 679
Query: 119 DIFLLLQSSVGPA-SADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
I+ +++++ G AD+FLP L +++ + + L + I ++ + + L+ GE GY+
Sbjct: 680 LIYTVMENNSGRMYGADDFLPVLTYVIAQCDMLELDTEIEYMMELLDPS-LLHGEGGYYL 738
Query: 178 TN 179
T+
Sbjct: 739 TS 740
>UNIPROTKB|F1PXX0 [details] [associations]
symbol:RIN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000159 InterPro:IPR000980 Pfam:PF00788 PROSITE:PS50001
PROSITE:PS50200 SMART:SM00252 SMART:SM00314 Pfam:PF02204
GO:GO:0007165 Gene3D:3.30.505.10 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GeneTree:ENSGT00530000063053
EMBL:AAEX03013755 EMBL:AAEX03013756 Ensembl:ENSCAFT00000008627
Uniprot:F1PXX0
Length = 897
Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
Identities = 27/122 (22%), Positives = 64/122 (52%)
Query: 59 EIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCR 118
+++E ++ ++ N + L G+ D V K + M + +P+ K+ ++ C+
Sbjct: 625 QLKENLQLVRQRNPQEL--GVFAPTPDFVD-VEKIKVKFMTMQKMYSPEKKVMLLLRVCK 681
Query: 119 DIFLLLQSSVGPA-SADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
I+ +++++ G AD+FLP L +++ + + L + I ++ + + L+ GE GY+
Sbjct: 682 LIYTVMENNSGRMYGADDFLPVLTYVIAQCDMLELDTEIEYMMELLDPS-LLHGEGGYYL 740
Query: 178 TN 179
T+
Sbjct: 741 TS 742
>UNIPROTKB|D4A6C4 [details] [associations]
symbol:Rin2 "Ras and Rab interactor 2 (Predicted), isoform
CRA_c" species:10116 "Rattus norvegicus" [GO:0007165 "signal
transduction" evidence=IEA] InterPro:IPR000159 InterPro:IPR000980
Pfam:PF00788 PROSITE:PS50001 PROSITE:PS50200 SMART:SM00252
SMART:SM00314 RGD:1305873 Pfam:PF02204 GO:GO:0007165
Gene3D:3.30.505.10 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 EMBL:CH474026
GeneTree:ENSGT00530000063053 CTD:54453 OrthoDB:EOG46DM2M
IPI:IPI00947997 RefSeq:NP_001101256.1 UniGene:Rn.34193
Ensembl:ENSRNOT00000064695 GeneID:311494 KEGG:rno:311494
NextBio:663719 Uniprot:D4A6C4
Length = 902
Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
Identities = 26/122 (21%), Positives = 66/122 (54%)
Query: 59 EIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCR 118
+++E ++ ++ N + L G+ + +L + K + M + +P+ K+ ++ C+
Sbjct: 631 QLKENLQLVRQRNPQEL--GVFAPTPDLMELEKIKL-KFMTMQKMYSPEKKVMLLLRVCK 687
Query: 119 DIFLLLQSSVGPA-SADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
I+ +++++ G AD+FLP L +++ + + L + I ++ + + L+ GE GY+
Sbjct: 688 LIYTVMENNSGRMYGADDFLPVLTYVIAQCDMLELDTEIEYMMELLDPS-LLHGEGGYYL 746
Query: 178 TN 179
T+
Sbjct: 747 TS 748
>MGI|MGI:1921280 [details] [associations]
symbol:Rin2 "Ras and Rab interactor 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000159
InterPro:IPR000980 Pfam:PF00788 PROSITE:PS50001 PROSITE:PS50200
SMART:SM00252 SMART:SM00314 MGI:MGI:1921280 Pfam:PF02204
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:3.30.505.10 GO:GO:0006897 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 EMBL:AL672100
GeneTree:ENSGT00530000063053 CTD:54453 eggNOG:NOG257110
HOVERGEN:HBG023719 OMA:FHMADGS OrthoDB:EOG46DM2M ChiTaRS:RIN2
EMBL:AK014548 EMBL:AK040763 EMBL:AK150680 EMBL:AK151332
EMBL:AK152893 EMBL:BC005529 EMBL:BC040390 EMBL:BI660407
IPI:IPI00331209 IPI:IPI00928326 RefSeq:NP_083000.5
UniGene:Mm.228799 UniGene:Mm.433263 ProteinModelPortal:Q9D684
SMR:Q9D684 STRING:Q9D684 PhosphoSite:Q9D684 PRIDE:Q9D684
DNASU:74030 Ensembl:ENSMUST00000110005 GeneID:74030 KEGG:mmu:74030
HOGENOM:HOG000022588 InParanoid:A8Y5L0 NextBio:339580 Bgee:Q9D684
CleanEx:MM_RIN2 Genevestigator:Q9D684 GermOnline:ENSMUSG00000001768
Uniprot:Q9D684
Length = 903
Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
Identities = 26/122 (21%), Positives = 66/122 (54%)
Query: 59 EIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCR 118
+++E ++ ++ N + L G+ + +L + K + M + +P+ K+ ++ C+
Sbjct: 632 QLKENLQLVRQRNPQEL--GVFAPTPDLMELEKIKL-KFMTMQKMYSPEKKVMLLLRVCK 688
Query: 119 DIFLLLQSSVGPA-SADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
I+ +++++ G AD+FLP L +++ + + L + I ++ + + L+ GE GY+
Sbjct: 689 LIYTVMENNSGRMYGADDFLPVLTYVIAQCDMLELDTEIEYMMELLDPS-LLHGEGGYYL 747
Query: 178 TN 179
T+
Sbjct: 748 TS 749
>UNIPROTKB|J9NY33 [details] [associations]
symbol:RIN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000159 InterPro:IPR000980 Pfam:PF00788 PROSITE:PS50001
PROSITE:PS50200 SMART:SM00252 SMART:SM00314 Pfam:PF02204
GO:GO:0007165 Gene3D:3.30.505.10 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GeneTree:ENSGT00530000063053
EMBL:AAEX03013755 EMBL:AAEX03013756 Ensembl:ENSCAFT00000049150
Uniprot:J9NY33
Length = 908
Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
Identities = 27/122 (22%), Positives = 64/122 (52%)
Query: 59 EIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCR 118
+++E ++ ++ N + L G+ D V K + M + +P+ K+ ++ C+
Sbjct: 636 QLKENLQLVRQRNPQEL--GVFAPTPDFVD-VEKIKVKFMTMQKMYSPEKKVMLLLRVCK 692
Query: 119 DIFLLLQSSVGPA-SADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
I+ +++++ G AD+FLP L +++ + + L + I ++ + + L+ GE GY+
Sbjct: 693 LIYTVMENNSGRMYGADDFLPVLTYVIAQCDMLELDTEIEYMMELLDPS-LLHGEGGYYL 751
Query: 178 TN 179
T+
Sbjct: 752 TS 753
>UNIPROTKB|J9P0L3 [details] [associations]
symbol:RIN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000159 InterPro:IPR000980 Pfam:PF00788 PROSITE:PS50001
PROSITE:PS50200 SMART:SM00252 SMART:SM00314 Pfam:PF02204
GO:GO:0007165 Gene3D:3.30.505.10 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GeneTree:ENSGT00530000063053
OMA:FHMADGS EMBL:AAEX03013755 EMBL:AAEX03013756
Ensembl:ENSCAFT00000046468 Uniprot:J9P0L3
Length = 946
Score = 113 (44.8 bits), Expect = 0.00054, P = 0.00054
Identities = 27/122 (22%), Positives = 64/122 (52%)
Query: 59 EIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCR 118
+++E ++ ++ N + L G+ D V K + M + +P+ K+ ++ C+
Sbjct: 674 QLKENLQLVRQRNPQEL--GVFAPTPDFVD-VEKIKVKFMTMQKMYSPEKKVMLLLRVCK 730
Query: 119 DIFLLLQSSVGPA-SADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
I+ +++++ G AD+FLP L +++ + + L + I ++ + + L+ GE GY+
Sbjct: 731 LIYTVMENNSGRMYGADDFLPVLTYVIAQCDMLELDTEIEYMMELLDPS-LLHGEGGYYL 789
Query: 178 TN 179
T+
Sbjct: 790 TS 791
>UNIPROTKB|F1P3K9 [details] [associations]
symbol:RIN2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000159 InterPro:IPR000980 Pfam:PF00788 PROSITE:PS50001
PROSITE:PS50200 SMART:SM00252 SMART:SM00314 Pfam:PF02204
GO:GO:0007165 Gene3D:3.30.505.10 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GeneTree:ENSGT00530000063053
OMA:FHMADGS EMBL:AADN02044240 IPI:IPI00595290
Ensembl:ENSGALT00000013781 Uniprot:F1P3K9
Length = 848
Score = 112 (44.5 bits), Expect = 0.00065, P = 0.00065
Identities = 27/122 (22%), Positives = 64/122 (52%)
Query: 59 EIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCR 118
+++E ++ ++ N + L G+ D V K + M + +P+ K+ ++ C+
Sbjct: 579 QLKENLQLVRQRNPQEL--GVFVPTPDFVD-VEKIKVKFMTMQKMYSPEKKVMLLLRVCK 635
Query: 119 DIFLLLQSSVGPA-SADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
I+ +++++ G AD+FLP L +++ + + L + I ++ + + L+ GE GY+
Sbjct: 636 LIYTVMENNSGRLYGADDFLPVLTYVIAQCDMLELDTEIEYMMELLDPS-LLHGEGGYYL 694
Query: 178 TN 179
T+
Sbjct: 695 TS 696
>UNIPROTKB|E1B810 [details] [associations]
symbol:RIN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000159 InterPro:IPR000980 Pfam:PF00788 PROSITE:PS50001
PROSITE:PS50200 SMART:SM00252 SMART:SM00314 Pfam:PF02204
GO:GO:0007165 Gene3D:3.30.505.10 InterPro:IPR003123 PROSITE:PS51205
InterPro:IPR013995 SMART:SM00167 GeneTree:ENSGT00530000063053
OMA:FHMADGS EMBL:DAAA02035749 EMBL:DAAA02035750 IPI:IPI01028068
Ensembl:ENSBTAT00000056271 Uniprot:E1B810
Length = 895
Score = 112 (44.5 bits), Expect = 0.00069, P = 0.00069
Identities = 26/122 (21%), Positives = 64/122 (52%)
Query: 59 EIQERIRQLKWVNAKHLDCGIEETNATVRDLVYNSMTKLLEMDSVRAPQDKLACVVACCR 118
+++E ++ ++ N + L G+ D V K + M + +P+ K+ ++ C+
Sbjct: 623 QLKENLQLVRQRNPQEL--GVFAPTPDFVD-VEKIKVKFMTMQKMYSPEKKVMLLLRVCK 679
Query: 119 DIFLLLQSSVGPA-SADEFLPALIFLVLKMNPARLKSNIHFVTRFCNANRLMSGEAGYFF 177
I+ +++++ G AD+FLP L +++ + + L + + ++ + + L+ GE GY+
Sbjct: 680 LIYTVMENNSGRMYGADDFLPVLTYVIAQCDMLELDTEVEYMMELLDPS-LLHGEGGYYL 738
Query: 178 TN 179
T+
Sbjct: 739 TS 740
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.137 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 183 183 0.00076 110 3 11 22 0.36 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 589 (63 KB)
Total size of DFA: 159 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.81u 0.08s 16.89t Elapsed: 00:00:03
Total cpu time: 16.82u 0.08s 16.90t Elapsed: 00:00:03
Start: Thu Aug 15 11:03:00 2013 End: Thu Aug 15 11:03:03 2013