Your job contains 1 sequence.
>psy10334
MDELDGLSTIEVLFLRLFISTTSHVSRALAEVFRCFICIEKLRDTHLCPHCSKLCCLACI
RQFLTEERSQCPHCRASLHMTDLVNCRWMEEVTQHLDNLQMNSKSSLQTYQRLFPNSTLC
LNVKNLLSELKLKYGLSIKLVWIPGHMNISGNCAVDLAAKQAQTSPDAEILNVTHTDLKS
FFKKIPSEKWKLTWSYETCDNKLKNIKQDTKYWASSTRNIRKEEVVLTRLRIGHSLLTHK
FLLDRQEPPMCNDCQVQITIKQFKHILCDCPLYQSFRRKNNLTELTLSSLLRDDSTQIYK
VMRFLRQTKLFKLI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10334
(314 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|J3QRK3 - symbol:TRIM37 "E3 ubiquitin-protein li... 329 1.0e-29 1
UNIPROTKB|J3QSH5 - symbol:TRIM37 "E3 ubiquitin-protein li... 329 1.0e-29 1
UNIPROTKB|F1S260 - symbol:LOC100739276 "Uncharacterized p... 329 1.0e-29 1
UNIPROTKB|E1BGD4 - symbol:TRIM37 "Uncharacterized protein... 329 1.6e-28 1
MGI|MGI:2153072 - symbol:Trim37 "tripartite motif-contain... 329 1.6e-28 1
UNIPROTKB|E2RKB8 - symbol:TRIM37 "Uncharacterized protein... 329 1.6e-28 1
UNIPROTKB|F1PKZ8 - symbol:TRIM37 "Uncharacterized protein... 329 1.6e-28 1
UNIPROTKB|O94972 - symbol:TRIM37 "E3 ubiquitin-protein li... 329 1.6e-28 1
ZFIN|ZDB-GENE-030131-2957 - symbol:trim37 "tripartite mot... 328 2.0e-28 1
UNIPROTKB|F1NYX7 - symbol:TRIM37 "Uncharacterized protein... 328 2.1e-28 1
UNIPROTKB|J3KS72 - symbol:TRIM37 "E3 ubiquitin-protein li... 243 1.3e-20 1
UNIPROTKB|J3QSA0 - symbol:TRIM37 "E3 ubiquitin-protein li... 236 7.2e-20 1
UNIPROTKB|F8WEE6 - symbol:TRIM37 "E3 ubiquitin-protein li... 164 5.0e-09 1
UNIPROTKB|C9J0Q4 - symbol:RAD18 "E3 ubiquitin-protein lig... 123 2.7e-07 1
UNIPROTKB|F8WFA6 - symbol:RAD18 "E3 ubiquitin-protein lig... 118 9.6e-07 1
UNIPROTKB|F8WE49 - symbol:RAD18 "E3 ubiquitin-protein lig... 123 1.1e-05 2
UNIPROTKB|Q58DB5 - symbol:RAD18 "Uncharacterized protein"... 125 2.7e-05 1
UNIPROTKB|Q32LH8 - symbol:RAD18 "RAD18 protein" species:9... 125 4.6e-05 1
UNIPROTKB|Q9NS91 - symbol:RAD18 "E3 ubiquitin-protein lig... 123 5.4e-05 2
MGI|MGI:1890476 - symbol:Rad18 "RAD18 homolog (S. cerevis... 120 8.1e-05 2
DICTYBASE|DDB_G0272454 - symbol:DDB_G0272454 "TNF recepto... 114 8.9e-05 2
UNIPROTKB|E2RJU5 - symbol:RAD18 "Uncharacterized protein"... 122 0.00012 1
DICTYBASE|DDB_G0278935 - symbol:rad18 "C3HC4-type zinc fi... 123 0.00014 1
RGD|1306993 - symbol:Rad18 "RAD18 homolog (S. cerevisiae)... 119 0.00027 1
UNIPROTKB|F1NVL6 - symbol:RAD18 "Uncharacterized protein"... 118 0.00033 1
UNIPROTKB|E9PN08 - symbol:RNF5 "E3 ubiquitin-protein liga... 91 0.00088 1
>UNIPROTKB|J3QRK3 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC099850 EMBL:AC100832 HGNC:HGNC:7523 ChiTaRS:TRIM37
EMBL:AC005207 EMBL:AC036154 ProteinModelPortal:J3QRK3
Ensembl:ENST00000584889 Uniprot:J3QRK3
Length = 103
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCR 87
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCRA L + +LVNCR
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCR 67
Query: 88 WMEEVTQHLDNLQMNS 103
W EEVTQ LD LQ+ S
Sbjct: 68 WAEEVTQQLDTLQLCS 83
>UNIPROTKB|J3QSH5 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC099850 EMBL:AC100832 HGNC:HGNC:7523 ChiTaRS:TRIM37
EMBL:AC005207 EMBL:AC036154 Ensembl:ENST00000580122 Uniprot:J3QSH5
Length = 113
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCR 87
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCRA L + +LVNCR
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCR 67
Query: 88 WMEEVTQHLDNLQMNS 103
W EEVTQ LD LQ+ S
Sbjct: 68 WAEEVTQQLDTLQLCS 83
>UNIPROTKB|F1S260 [details] [associations]
symbol:LOC100739276 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR002083 InterPro:IPR003649
InterPro:IPR008974 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
PROSITE:PS50144 SMART:SM00184 SMART:SM00336 SMART:SM00502
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 SUPFAM:SSF49599 GeneTree:ENSGT00410000025800
EMBL:FP340197 EMBL:FP016131 RefSeq:XP_003483092.1
Ensembl:ENSSSCT00000019212 GeneID:100739276 KEGG:ssc:100739276
OMA:SELMAKS Uniprot:F1S260
Length = 340
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCR 87
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCRA L + +LVNCR
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCR 67
Query: 88 WMEEVTQHLDNLQMNS 103
W EEVTQ LD LQ+ S
Sbjct: 68 WAEEVTQQLDTLQLCS 83
>UNIPROTKB|E1BGD4 [details] [associations]
symbol:TRIM37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070842 "aggresome assembly" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0044445 "cytosolic
part" evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0016235 "aggresome"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005164
"tumor necrosis factor receptor binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR002083 InterPro:IPR003649 InterPro:IPR008974
Pfam:PF00643 Pfam:PF00917 PROSITE:PS50089 PROSITE:PS50119
PROSITE:PS50144 SMART:SM00061 SMART:SM00184 SMART:SM00336
SMART:SM00502 GO:GO:0005777 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016235 GO:GO:0032088
GO:GO:0004842 GO:GO:0044445 GO:GO:0051865 SUPFAM:SSF49599
GO:GO:0070842 OMA:CYIRNST GeneTree:ENSGT00410000025800
EMBL:DAAA02048326 EMBL:DAAA02048327 EMBL:DAAA02048328
IPI:IPI00715943 UniGene:Bt.24470 Ensembl:ENSBTAT00000035518
ArrayExpress:E1BGD4 Uniprot:E1BGD4
Length = 961
Score = 329 (120.9 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCR 87
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCRA L + +LVNCR
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCR 67
Query: 88 WMEEVTQHLDNLQMNS 103
W EEVTQ LD LQ+ S
Sbjct: 68 WAEEVTQQLDTLQLCS 83
>MGI|MGI:2153072 [details] [associations]
symbol:Trim37 "tripartite motif-containing 37" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005164 "tumor necrosis factor receptor binding"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016235 "aggresome" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=ISO] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR002083 InterPro:IPR003649 InterPro:IPR008974
Pfam:PF00643 Pfam:PF00917 PROSITE:PS50089 PROSITE:PS50119
PROSITE:PS50144 SMART:SM00061 SMART:SM00184 SMART:SM00336
SMART:SM00502 UniPathway:UPA00143 MGI:MGI:2153072 Prosite:PS00518
GO:GO:0048471 GO:GO:0005777 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016235 GO:GO:0032088
GO:GO:0004842 GO:GO:0044445 GO:GO:0051865 SUPFAM:SSF49599
GO:GO:0070842 CTD:4591 eggNOG:NOG251245 HOGENOM:HOG000013010
HOVERGEN:HBG057591 KO:K10608 OMA:CYIRNST OrthoDB:EOG42NHZP
ChiTaRS:TRIM37 EMBL:AB093271 EMBL:BC058678 EMBL:BC059070
IPI:IPI00381355 RefSeq:NP_932104.1 UniGene:Mm.17436
ProteinModelPortal:Q6PCX9 SMR:Q6PCX9 STRING:Q6PCX9
PhosphoSite:Q6PCX9 PRIDE:Q6PCX9 Ensembl:ENSMUST00000041282
GeneID:68729 KEGG:mmu:68729 GeneTree:ENSGT00410000025800
InParanoid:Q6PCX9 NextBio:327786 Bgee:Q6PCX9 CleanEx:MM_TRIM37
Genevestigator:Q6PCX9 GermOnline:ENSMUSG00000018548 Uniprot:Q6PCX9
Length = 961
Score = 329 (120.9 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCR 87
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCRA L + +LVNCR
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCR 67
Query: 88 WMEEVTQHLDNLQMNS 103
W EEVTQ LD LQ+ S
Sbjct: 68 WAEEVTQQLDTLQLCS 83
>UNIPROTKB|E2RKB8 [details] [associations]
symbol:TRIM37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR002083 InterPro:IPR003649
InterPro:IPR008974 Pfam:PF00643 Pfam:PF00917 PROSITE:PS50089
PROSITE:PS50119 PROSITE:PS50144 SMART:SM00061 SMART:SM00184
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
CTD:4591 KO:K10608 OMA:CYIRNST GeneTree:ENSGT00410000025800
EMBL:AAEX03006581 EMBL:AAEX03006582 RefSeq:XP_537697.3
RefSeq:XP_853278.1 Ensembl:ENSCAFT00000027859 GeneID:480575
KEGG:cfa:480575 NextBio:20855573 Uniprot:E2RKB8
Length = 962
Score = 329 (120.9 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCR 87
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCRA L + +LVNCR
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCR 67
Query: 88 WMEEVTQHLDNLQMNS 103
W EEVTQ LD LQ+ S
Sbjct: 68 WAEEVTQQLDTLQLCS 83
>UNIPROTKB|F1PKZ8 [details] [associations]
symbol:TRIM37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR002083 InterPro:IPR003649
InterPro:IPR008974 Pfam:PF00643 Pfam:PF00917 PROSITE:PS50089
PROSITE:PS50119 PROSITE:PS50144 SMART:SM00061 SMART:SM00184
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
GeneTree:ENSGT00410000025800 EMBL:AAEX03006581 EMBL:AAEX03006582
Ensembl:ENSCAFT00000027862 Uniprot:F1PKZ8
Length = 962
Score = 329 (120.9 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCR 87
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCRA L + +LVNCR
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCR 67
Query: 88 WMEEVTQHLDNLQMNS 103
W EEVTQ LD LQ+ S
Sbjct: 68 WAEEVTQQLDTLQLCS 83
>UNIPROTKB|O94972 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0070842 "aggresome assembly"
evidence=IDA] [GO:0005164 "tumor necrosis factor receptor binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR002083
InterPro:IPR003649 InterPro:IPR008974 Pfam:PF00643 Pfam:PF00917
PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50144 SMART:SM00061
SMART:SM00184 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0042803
GO:GO:0005777 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016235 GO:GO:0032088 GO:GO:0004842
GO:GO:0044445 GO:GO:0051865 SUPFAM:SSF49599 GO:GO:0070842
EMBL:AF213365 EMBL:AB020705 EMBL:BX537955 EMBL:BC036012
IPI:IPI00016619 IPI:IPI00479325 RefSeq:NP_001005207.1
RefSeq:NP_056109.1 UniGene:Hs.579079 UniGene:Hs.605697 PDB:3LRQ
PDBsum:3LRQ ProteinModelPortal:O94972 SMR:O94972 DIP:DIP-34437N
IntAct:O94972 MINT:MINT-1433848 STRING:O94972 PhosphoSite:O94972
PaxDb:O94972 PRIDE:O94972 Ensembl:ENST00000262294
Ensembl:ENST00000376149 Ensembl:ENST00000393066 GeneID:4591
KEGG:hsa:4591 UCSC:uc002iwy.4 UCSC:uc002ixa.4 CTD:4591
GeneCards:GC17M057059 H-InvDB:HIX0014039 HGNC:HGNC:7523
HPA:HPA021911 MIM:253250 MIM:605073 neXtProt:NX_O94972
Orphanet:2576 PharmGKB:PA35497 eggNOG:NOG251245
HOGENOM:HOG000013010 HOVERGEN:HBG057591 InParanoid:O94972 KO:K10608
OMA:CYIRNST OrthoDB:EOG42NHZP ChiTaRS:TRIM37
EvolutionaryTrace:O94972 GenomeRNAi:4591 NextBio:17650
ArrayExpress:O94972 Bgee:O94972 CleanEx:HS_TRIM37
Genevestigator:O94972 GermOnline:ENSG00000108395 Uniprot:O94972
Length = 964
Score = 329 (120.9 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCR 87
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCRA L + +LVNCR
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCR 67
Query: 88 WMEEVTQHLDNLQMNS 103
W EEVTQ LD LQ+ S
Sbjct: 68 WAEEVTQQLDTLQLCS 83
>ZFIN|ZDB-GENE-030131-2957 [details] [associations]
symbol:trim37 "tripartite motif containing 37"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR002083 InterPro:IPR003649
InterPro:IPR008974 Pfam:PF00643 Pfam:PF00917 PROSITE:PS50089
PROSITE:PS50119 PROSITE:PS50144 SMART:SM00061 SMART:SM00184
SMART:SM00336 SMART:SM00502 ZFIN:ZDB-GENE-030131-2957 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
SUPFAM:SSF49599 CTD:4591 KO:K10608 GeneTree:ENSGT00410000025800
EMBL:AL935293 IPI:IPI00900684 RefSeq:XP_003199407.1
UniGene:Dr.156359 UniGene:Dr.158189 UniGene:Dr.160250
UniGene:Dr.22929 Ensembl:ENSDART00000110986
Ensembl:ENSDART00000134255 GeneID:324237 KEGG:dre:324237
NextBio:20808670 Uniprot:E7FBZ8
Length = 957
Score = 328 (120.5 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 54/74 (72%), Positives = 65/74 (87%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCR 87
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCRA L + +LVNCR
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCR 67
Query: 88 WMEEVTQHLDNLQM 101
W EEVTQ LD LQ+
Sbjct: 68 WAEEVTQQLDTLQL 81
>UNIPROTKB|F1NYX7 [details] [associations]
symbol:TRIM37 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005164 "tumor necrosis factor receptor binding" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0016235 "aggresome"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0044445 "cytosolic
part" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR002083
InterPro:IPR003649 InterPro:IPR008974 Pfam:PF00643 Pfam:PF00917
PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50144 SMART:SM00061
SMART:SM00184 SMART:SM00336 SMART:SM00502 GO:GO:0005777
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016235 GO:GO:0032088 GO:GO:0004842 GO:GO:0044445
GO:GO:0051865 SUPFAM:SSF49599 GO:GO:0070842 OMA:CYIRNST
GeneTree:ENSGT00410000025800 EMBL:AADN02025792 EMBL:AADN02025793
IPI:IPI00593166 PRIDE:F1NYX7 Ensembl:ENSGALT00000008153
Uniprot:F1NYX7
Length = 983
Score = 328 (120.5 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 54/74 (72%), Positives = 65/74 (87%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCR 87
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCRA L + +LVNCR
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCR 67
Query: 88 WMEEVTQHLDNLQM 101
W EEVTQ LD LQ+
Sbjct: 68 WAEEVTQQLDTLQL 81
>UNIPROTKB|J3KS72 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC099850 EMBL:AC100832 HGNC:HGNC:7523 ChiTaRS:TRIM37
EMBL:AC005207 EMBL:AC036154 ProteinModelPortal:J3KS72
Ensembl:ENST00000577554 Uniprot:J3KS72
Length = 67
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 39/51 (76%), Positives = 47/51 (92%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASL 78
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCR SL
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRVSL 58
>UNIPROTKB|J3QSA0 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC099850 EMBL:AC100832 HGNC:HGNC:7523 ChiTaRS:TRIM37
EMBL:AC005207 EMBL:AC036154 ProteinModelPortal:J3QSA0
Ensembl:ENST00000580973 Uniprot:J3QSA0
Length = 58
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 37/51 (72%), Positives = 46/51 (90%)
Query: 28 ALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASL 78
++AEVFRCFIC+EKLRD LCPHCSKLCC +CIR++LTE+R+QCPHCR +
Sbjct: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRKGM 58
>UNIPROTKB|F8WEE6 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR002083 InterPro:IPR003649
InterPro:IPR008974 Pfam:PF00643 Pfam:PF00917 PROSITE:PS50119
PROSITE:PS50144 SMART:SM00061 SMART:SM00336 SMART:SM00502
GO:GO:0008270 GO:GO:0005622 SUPFAM:SSF49599 EMBL:AC099850
EMBL:AC100832 HGNC:HGNC:7523 ChiTaRS:TRIM37 EMBL:AC005207
EMBL:AC036154 IPI:IPI00872140 ProteinModelPortal:F8WEE6 SMR:F8WEE6
Ensembl:ENST00000393065 UCSC:uc010woc.2 ArrayExpress:F8WEE6
Bgee:F8WEE6 Uniprot:F8WEE6
Length = 930
Score = 164 (62.8 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 60 IRQFLTEERSQCPHCRASLHMTDLVNCRWMEEVTQHLDNLQMNS 103
+ ++LTE+R+QCPHCRA L + +LVNCRW EEVTQ LD LQ+ S
Sbjct: 6 VERWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQLCS 49
>UNIPROTKB|C9J0Q4 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0001741 "XY
body" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0045910 "negative regulation of DNA
recombination" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0009411
GO:GO:0046872 GO:GO:0008270 GO:GO:0000785 GO:GO:0007283
GO:GO:0006974 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0045910 EMBL:AC068312
EMBL:AC008151 EMBL:AC034186 HGNC:HGNC:18278 HOGENOM:HOG000234845
IPI:IPI00879143 ProteinModelPortal:C9J0Q4 SMR:C9J0Q4 STRING:C9J0Q4
Ensembl:ENST00000413832 ArrayExpress:C9J0Q4 Bgee:C9J0Q4
Uniprot:C9J0Q4
Length = 92
Score = 123 (48.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 25 VSRALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLV 84
V + + ++ RC IC E + P CS C CIR+FL+ ++QCP C ++ DL
Sbjct: 15 VMKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY-KTQCPTCCVTVTEPDLK 73
Query: 85 NCRWMEEVTQHLD 97
N R ++E+ + L+
Sbjct: 74 NNRILDELVKSLN 86
>UNIPROTKB|F8WFA6 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC068312 EMBL:AC008151
EMBL:AC034186 HGNC:HGNC:18278 IPI:IPI00925824
ProteinModelPortal:F8WFA6 SMR:F8WFA6 Ensembl:ENST00000421052
ArrayExpress:F8WFA6 Bgee:F8WFA6 Uniprot:F8WFA6
Length = 126
Score = 118 (46.6 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 25 VSRALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLV 84
V + + ++ RC IC E + P CS C CIR+FL+ ++QCP C ++ DL
Sbjct: 15 VMKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY-KTQCPTCCVTVTEPDLK 73
Query: 85 NCRWMEEV 92
N R ++E+
Sbjct: 74 NNRILDEL 81
>UNIPROTKB|F8WE49 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 Prosite:PS00518
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:1.10.720.30 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC068312 EMBL:AC008151 EMBL:AC034186
HGNC:HGNC:18278 IPI:IPI00878498 ProteinModelPortal:F8WE49
SMR:F8WE49 Ensembl:ENST00000415439 ArrayExpress:F8WE49 Bgee:F8WE49
Uniprot:F8WE49
Length = 310
Score = 123 (48.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 25 VSRALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLV 84
V + + ++ RC IC E + P CS C CIR+FL+ ++QCP C ++ DL
Sbjct: 15 VMKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY-KTQCPTCCVTVTEPDLK 73
Query: 85 NCRWMEEVTQHLD 97
N R ++E+ + L+
Sbjct: 74 NNRILDELVKSLN 86
Score = 42 (19.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 92 VTQHLDNLQMNSKSSLQTYQRLFPNSTLCLNVKNLLSELKLK-----YGLSIK 139
+ +HLD+ + + L V NLLS+ LK +GLSI+
Sbjct: 216 INKHLDSCLSREEKKESLRSSVHKRKPLPKTVYNLLSDRDLKKKLKEHGLSIQ 268
>UNIPROTKB|Q58DB5 [details] [associations]
symbol:RAD18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 Gene3D:1.10.720.30 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HOVERGEN:HBG054721
GeneTree:ENSGT00390000011230 EMBL:DAAA02053765 EMBL:DAAA02053766
EMBL:DAAA02053767 EMBL:DAAA02053768 EMBL:DAAA02053769
EMBL:DAAA02053770 IPI:IPI00702052 UniGene:Bt.26308 EMBL:BT021682
STRING:Q58DB5 Ensembl:ENSBTAT00000066111 InParanoid:Q58DB5
Uniprot:Q58DB5
Length = 336
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 25 VSRALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLV 84
V + + ++ RC IC E + P CS C CIR+FL+ ++QCP C ++ DL
Sbjct: 15 VMKKVDDLLRCGICFEYFNIAMMIPQCSHNYCSLCIRKFLSY-KTQCPTCCVTVTEPDLK 73
Query: 85 NCRWMEEVTQHLDNLQMNSKSSLQTYQRLFPNSTLCLNVKNLLSE 129
N R ++E+ ++L N N LQ P S + KNL ++
Sbjct: 74 NNRVLDELVKNL-NFARNHL--LQFALESPPISAASSSSKNLATK 115
>UNIPROTKB|Q32LH8 [details] [associations]
symbol:RAD18 "RAD18 protein" species:9913 "Bos taurus"
[GO:0045910 "negative regulation of DNA recombination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001741 "XY
body" evidence=IEA] [GO:0000785 "chromatin" evidence=IEA]
[GO:0000403 "Y-form DNA binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 GO:GO:0009411 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0007283
Gene3D:1.10.720.30 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0005657 GO:GO:0000403
GO:GO:0045910 eggNOG:COG5432 KO:K10627 CTD:56852
HOGENOM:HOG000234845 HOVERGEN:HBG054721 OMA:HSKYRKK
GeneTree:ENSGT00390000011230 EMBL:DAAA02053765 EMBL:DAAA02053766
EMBL:DAAA02053767 EMBL:DAAA02053768 EMBL:DAAA02053769
EMBL:DAAA02053770 EMBL:BC109568 IPI:IPI00702052
RefSeq:NP_001030372.2 UniGene:Bt.26308 STRING:Q32LH8
Ensembl:ENSBTAT00000047319 GeneID:514440 KEGG:bta:514440
InParanoid:Q32LH8 OrthoDB:EOG4RFKTF NextBio:20871333 Uniprot:Q32LH8
Length = 456
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 25 VSRALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLV 84
V + + ++ RC IC E + P CS C CIR+FL+ ++QCP C ++ DL
Sbjct: 15 VMKKVDDLLRCGICFEYFNIAMMIPQCSHNYCSLCIRKFLSY-KTQCPTCCVTVTEPDLK 73
Query: 85 NCRWMEEVTQHLDNLQMNSKSSLQTYQRLFPNSTLCLNVKNLLSE 129
N R ++E+ ++L N N LQ P S + KNL ++
Sbjct: 74 NNRVLDELVKNL-NFARNHL--LQFALESPPISAASSSSKNLATK 115
>UNIPROTKB|Q9NS91 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0045910 "negative
regulation of DNA recombination" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=NAS] [GO:0006281 "DNA repair" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] [GO:0000403 "Y-form DNA binding"
evidence=IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031593
"polyubiquitin binding" evidence=IDA] InterPro:IPR001841
InterPro:IPR003034 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0009411
GO:GO:0046872 GO:GO:0003684 GO:GO:0016874 GO:GO:0008270
GO:GO:0006281 GO:GO:0000785 GO:GO:0007283 GO:GO:0016567
Gene3D:1.10.720.30 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031593 InterPro:IPR017907 GO:GO:0001741 GO:GO:0005657
GO:GO:0000403 GO:GO:0045910 eggNOG:COG5432 KO:K10627 EMBL:AB035274
EMBL:AF169796 EMBL:AY004333 EMBL:AK023075 EMBL:AY961989
EMBL:AC008151 EMBL:AC034186 EMBL:BC001302 IPI:IPI00024579
RefSeq:NP_064550.3 UniGene:Hs.375684 PDB:2Y43 PDB:2YBF PDBsum:2Y43
PDBsum:2YBF ProteinModelPortal:Q9NS91 SMR:Q9NS91 DIP:DIP-29831N
IntAct:Q9NS91 STRING:Q9NS91 PhosphoSite:Q9NS91 DMDM:21362876
PaxDb:Q9NS91 PeptideAtlas:Q9NS91 PRIDE:Q9NS91 DNASU:56852
Ensembl:ENST00000264926 GeneID:56852 KEGG:hsa:56852 UCSC:uc003brd.3
CTD:56852 GeneCards:GC03M008896 H-InvDB:HIX0003022 HGNC:HGNC:18278
MIM:605256 neXtProt:NX_Q9NS91 PharmGKB:PA134912253
HOGENOM:HOG000234845 HOVERGEN:HBG054721 InParanoid:Q9NS91
OMA:HSKYRKK PhylomeDB:Q9NS91 GenomeRNAi:56852 NextBio:62262
ArrayExpress:Q9NS91 Bgee:Q9NS91 CleanEx:HS_RAD18
Genevestigator:Q9NS91 GermOnline:ENSG00000070950 Uniprot:Q9NS91
Length = 495
Score = 123 (48.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 25 VSRALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLV 84
V + + ++ RC IC E + P CS C CIR+FL+ ++QCP C ++ DL
Sbjct: 15 VMKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY-KTQCPTCCVTVTEPDLK 73
Query: 85 NCRWMEEVTQHLD 97
N R ++E+ + L+
Sbjct: 74 NNRILDELVKSLN 86
Score = 42 (19.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 92 VTQHLDNLQMNSKSSLQTYQRLFPNSTLCLNVKNLLSELKLK-----YGLSIK 139
+ +HLD+ + + L V NLLS+ LK +GLSI+
Sbjct: 216 INKHLDSCLSREEKKESLRSSVHKRKPLPKTVYNLLSDRDLKKKLKEHGLSIQ 268
>MGI|MGI:1890476 [details] [associations]
symbol:Rad18 "RAD18 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000403 "Y-form DNA binding" evidence=ISO]
[GO:0000785 "chromatin" evidence=IDA] [GO:0001741 "XY body"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005657 "replication fork" evidence=ISO] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009411 "response
to UV" evidence=IMP] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0045910
"negative regulation of DNA recombination" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003034 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
UniPathway:UPA00143 MGI:MGI:1890476 Prosite:PS00518 GO:GO:0005634
GO:GO:0009411 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0007283
GO:GO:0006974 GO:GO:0016567 Gene3D:1.10.720.30 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031593 InterPro:IPR017907 GO:GO:0001741
GO:GO:0045910 eggNOG:COG5432 KO:K10627 CTD:56852
HOGENOM:HOG000234845 HOVERGEN:HBG054721 EMBL:AF205278 EMBL:AK012795
IPI:IPI00470179 RefSeq:NP_067360.2 UniGene:Mm.103812
ProteinModelPortal:Q9QXK2 SMR:Q9QXK2 STRING:Q9QXK2
PhosphoSite:Q9QXK2 PRIDE:Q9QXK2 Ensembl:ENSMUST00000077088
GeneID:58186 KEGG:mmu:58186 UCSC:uc009dec.2
GeneTree:ENSGT00390000011230 NextBio:314151 Bgee:Q9QXK2
CleanEx:MM_RAD18 Genevestigator:Q9QXK2
GermOnline:ENSMUSG00000030254 Uniprot:Q9QXK2
Length = 509
Score = 120 (47.3 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 25 VSRALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLV 84
V + + ++ RC IC E + P CS C CIR+FL+ ++QCP C ++ DL
Sbjct: 15 VMKTIDDLLRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSY-KTQCPTCCVAVTEPDLR 73
Query: 85 NCRWMEEVTQHLD 97
N R ++E+ + ++
Sbjct: 74 NNRLLDELVKSMN 86
Score = 44 (20.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 92 VTQHLDNLQMNSKSSLQTYQRLFPNSTLCLNVKNLLSELKLK-----YGLSIK 139
+ +HLD+ + L V NLLS+ LK YGLS++
Sbjct: 216 INKHLDSCLSREEKKESLRSSAHKRKPLPKTVYNLLSDRDLKKKLKQYGLSVQ 268
>DICTYBASE|DDB_G0272454 [details] [associations]
symbol:DDB_G0272454 "TNF receptor-associated factor
3" species:44689 "Dictyostelium discoideum" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015880 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
SMART:SM00355 dictyBase:DDB_G0272454 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 EMBL:AAFI02000008 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
eggNOG:NOG321306 RefSeq:XP_645272.1 ProteinModelPortal:Q559R2
EnsemblProtists:DDB0217014 GeneID:8618438 KEGG:ddi:DDB_G0272454
InParanoid:Q559R2 OMA:KNYLECK Uniprot:Q559R2
Length = 595
Score = 114 (45.2 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 34 RCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCRWMEEVT 93
+C IC++ L C + L CL CI+Q L + R +CP CR SL L ++E+
Sbjct: 22 QCGICLQILVTPRQCRN-GHLFCLGCIQQSLKKNRHECPQCRCSLDFDSLSRSLFLEK-- 78
Query: 94 QHLDNLQMNSKS 105
HL NL + K+
Sbjct: 79 -HLKNLNVYCKN 89
Score = 52 (23.4 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 251 CNDCQVQITIKQFK-HILCDCP 271
CN C+ QI+ K+ K H+ +CP
Sbjct: 354 CNQCKSQISKKELKYHLDENCP 375
>UNIPROTKB|E2RJU5 [details] [associations]
symbol:RAD18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045910 "negative regulation of DNA
recombination" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001741 "XY body" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0000403 "Y-form DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003034 InterPro:IPR006642
Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800 SMART:SM00184
SMART:SM00513 SMART:SM00734 Pfam:PF00097 Prosite:PS00518
GO:GO:0005634 GO:GO:0009411 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0000785 GO:GO:0007283 Gene3D:1.10.720.30
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0001741 GO:GO:0005657 GO:GO:0000403 GO:GO:0045910 KO:K10627
CTD:56852 OMA:HSKYRKK GeneTree:ENSGT00390000011230
EMBL:AAEX03012082 EMBL:AAEX03012083 EMBL:AAEX03012084
RefSeq:XP_533750.2 ProteinModelPortal:E2RJU5
Ensembl:ENSCAFT00000008937 GeneID:476544 KEGG:cfa:476544
Uniprot:E2RJU5
Length = 503
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 25 VSRALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLV 84
V + + ++ RC IC + + P CS C CIR+FL+ ++QCP C ++ DL
Sbjct: 15 VMKTIDDLLRCGICFDYFNIAMMIPQCSHNYCSLCIRKFLSY-KTQCPTCCVTVTEPDLK 73
Query: 85 NCRWMEEVTQHLDNLQMNSKSSLQTYQRLFPNSTLCLNVKNLLSEL 130
N R ++E+ + L N N LQ P S + KNL +++
Sbjct: 74 NNRILDELVKSL-NFARNHL--LQFALESPPISPASSSSKNLAAKV 116
>DICTYBASE|DDB_G0278935 [details] [associations]
symbol:rad18 "C3HC4-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR003034
Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800 SMART:SM00513
dictyBase:DDB_G0278935 Prosite:PS00518 GenomeReviews:CM000152_GR
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 EMBL:AAFI02000024
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0008094 KO:K10695 RefSeq:XP_641970.2
ProteinModelPortal:Q54XR0 EnsemblProtists:DDB0304878 GeneID:8621702
KEGG:ddi:DDB_G0278935 eggNOG:NOG328594 InParanoid:Q54XR0
OMA:IHANECL Uniprot:Q54XR0
Length = 668
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 31 EVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNCRWME 90
++ +C IC + + P CS C CIRQ L+ + CP CR S + T LVN R ++
Sbjct: 15 QLLKCPICYDFFNTAMMIPKCSHNYCSFCIRQSLSFKEF-CPSCRISCNATQLVNNRQLD 73
Query: 91 EVTQHLDNL--QMNS-KSSLQTYQRLFPNSTLC-LNVKNLLSE 129
+ Q+ +L +++ K SLQ Q + L L ++N ++
Sbjct: 74 LIVQNYKSLIKEISKQKQSLQNQQNQIQDQILLHLKLENQFNQ 116
>RGD|1306993 [details] [associations]
symbol:Rad18 "RAD18 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000403 "Y-form DNA binding" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0001741 "XY body"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005657 "replication fork" evidence=ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009411 "response
to UV" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0045910 "negative regulation of DNA
recombination" evidence=ISO] InterPro:IPR001841 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 RGD:1306993
Prosite:PS00518 GO:GO:0005634 GO:GO:0009411 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0007283
Gene3D:1.10.720.30 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0005657 GO:GO:0000403
GO:GO:0045910 IPI:IPI00951538 Ensembl:ENSRNOT00000008214
UCSC:RGD:1306993 ArrayExpress:F1LYK9 Uniprot:F1LYK9
Length = 528
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 41/160 (25%), Positives = 76/160 (47%)
Query: 27 RALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNC 86
+ + ++ RC IC E + P CS C CIR+FL+ ++QCP C ++ DL N
Sbjct: 15 QTIDDLLRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSY-KTQCPTCCVAVTEPDLRNN 73
Query: 87 RWMEEVTQHLDNLQMNSKSSLQTYQRLFP-NST---LCLNVKNL-LSELKLKYGLSIKLV 141
R ++E+ + + + + P +ST + + V N+ ++ +K G +
Sbjct: 74 RLLDELVKSMSFARTRLLQFALESPPISPVSSTSKKVVVKVHNVEATQHPVKQGNRLMDK 133
Query: 142 WIPGHMNISGNCAVDLAAKQAQT--SPDAEILNVTHTDLK 179
++ + +G+C +L K+ + SP EI T D+K
Sbjct: 134 FL---IRETGDCVSELLGKENERKFSPQKEIS--TSADIK 168
>UNIPROTKB|F1NVL6 [details] [associations]
symbol:RAD18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000403 "Y-form DNA binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0001741 "XY
body" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045910
"negative regulation of DNA recombination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003034 InterPro:IPR006642
Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800 SMART:SM00184
SMART:SM00513 SMART:SM00734 Prosite:PS00518 GO:GO:0005634
GO:GO:0009411 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0005657 GO:GO:0000403
GO:GO:0045910 GeneTree:ENSGT00390000011230 EMBL:AADN02014513
EMBL:AADN02014514 EMBL:AADN02014515 EMBL:AADN02014516
IPI:IPI00589734 Ensembl:ENSGALT00000013623 OMA:TKCSHNF
Uniprot:F1NVL6
Length = 501
Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 27 RALAEVFRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTEERSQCPHCRASLHMTDLVNC 86
+A+ ++ RC IC + + P CS C CIR+FL+ ++QCP C ++ +DL N
Sbjct: 18 KAVDDLLRCGICFDYFSIAVIIPQCSHNYCSLCIRKFLSY-KTQCPTCCVAVSESDLKNN 76
Query: 87 RWMEEVTQ 94
R ++E+ +
Sbjct: 77 RTLDELVK 84
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 91 (37.1 bits), Expect = 0.00088, P = 0.00088
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 33 FRCFICIEKLRDTHLCPHCSKLCCLACIRQFLTE--ERSQCPHCRASLHMTDLV 84
F C IC+E R+ + C L C C+ Q+L ER +CP C+A + +V
Sbjct: 25 FECNICLETAREA-VVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVV 77
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.136 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 314 299 0.00095 115 3 11 22 0.44 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 619 (66 KB)
Total size of DFA: 241 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.39u 0.11s 27.50t Elapsed: 00:00:06
Total cpu time: 27.39u 0.11s 27.50t Elapsed: 00:00:06
Start: Thu Aug 15 11:06:38 2013 End: Thu Aug 15 11:06:44 2013