BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10335
(177 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8WQI7|RL18A_SPOFR 60S ribosomal protein L18a OS=Spodoptera frugiperda GN=RpL18A PE=2
SV=1
Length = 177
Score = 306 bits (785), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 145/177 (81%), Positives = 158/177 (89%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKAKG LKEYEVIGRKLP+E E PLYKMRIF+PD IVAKSRFWYFLRQLKKFKK+TGE
Sbjct: 1 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDQIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IVS++ I EKSP KIKNFGIWLRY+SRSG HNMYREYRDLSV GAVTQCYRDMGARHRAR
Sbjct: 61 IVSIREIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYFL 177
AHSIQIIK+EV+KASACRRP VKQFH+S IRFPLPKR+ H R+N F+ +RP TYFL
Sbjct: 121 AHSIQIIKVEVIKASACRRPQVKQFHNSTIRFPLPKRVHHHKRLNTFAYKRPSTYFL 177
>sp|P41093|RL18A_DROME 60S ribosomal protein L18a OS=Drosophila melanogaster GN=RpL18A
PE=1 SV=1
Length = 177
Score = 291 bits (746), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 137/176 (77%), Positives = 155/176 (88%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
M+AKGLLKEYEV+GRKLP+EKE TPLYKMRIFAPD+IVAKSRFWYFLRQLKKFKK+TGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IVS+K + E SP KIKNFGIWLRYDSRSGTHNMYREYRDL+V GAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQIIK++ + A+ RR VKQFHDS+I+FPL +R+ H LFS R+P+TYF
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>sp|Q7ZWJ4|RL18A_DANRE 60S ribosomal protein L18a OS=Danio rerio GN=rpl18a PE=2 SV=1
Length = 176
Score = 263 bits (671), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 146/176 (82%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LP+ K PLY+MRIFAP+ +VAKSRFWYF+ QL+K KK++GE
Sbjct: 1 MKASGTLREYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV L+ EKSP K+KNFGIWLRYDSRSGTHNMYREYRDL+ SGAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGLVFEKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AH+IQI+K++V+ A+ CRRP +KQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHAIQIMKVQVIAANKCRRPAIKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>sp|Q02543|RL18A_HUMAN 60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2
Length = 176
Score = 263 bits (671), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 144/176 (81%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + AS CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>sp|Q3T003|RL18A_BOVIN 60S ribosomal protein L18a OS=Bos taurus GN=RPL18A PE=2 SV=1
Length = 176
Score = 263 bits (671), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 144/176 (81%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + AS CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>sp|P62718|RL18A_RAT 60S ribosomal protein L18a OS=Rattus norvegicus GN=Rpl18a PE=2 SV=1
Length = 176
Score = 261 bits (667), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/176 (68%), Positives = 143/176 (81%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + A CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>sp|P62717|RL18A_MOUSE 60S ribosomal protein L18a OS=Mus musculus GN=Rpl18a PE=1 SV=1
Length = 176
Score = 261 bits (667), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/176 (68%), Positives = 143/176 (81%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + A CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>sp|Q90YU9|RL18A_ICTPU 60S ribosomal protein L18a OS=Ictalurus punctatus GN=rpl18a PE=2
SV=1
Length = 176
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 116/176 (65%), Positives = 144/176 (81%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LP+ K PLY+MRIFAP+ +VAKSRFWYF+ QL+K KK+ GE
Sbjct: 1 MKASGTLREYKVVGRLLPSAKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
V L+ E+SP K+KNFGIWLRYDSRSGTHNMYREYRDL+ SGAVTQCYRDMGARHRAR
Sbjct: 61 TVYCGLVHEQSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AH+IQI+K++V+ A+ CRR +KQFHDS+I+FPLP R+ F++RRP+T+F
Sbjct: 121 AHAIQIMKVQVIAANKCRRAAIKQFHDSKIKFPLPHRVLRRQHKPRFTTRRPQTFF 176
>sp|O57561|RL18A_SALSA 60S ribosomal protein L18a OS=Salmo salar GN=rpl18a PE=2 SV=1
Length = 176
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 140/176 (79%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LP+ K PLY+MRIFAP+ +VAKSRFWYF+ QL+K KK+ GE
Sbjct: 1 MKASGTLREYKVVGRLLPSVKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
V L+ EK+P K+KNFG+WLR DSRSGTHNMYREYRDL+ S AVTQCYRDMGARHRAR
Sbjct: 61 TVYCGLVHEKTPLKVKNFGVWLRNDSRSGTHNMYREYRDLTTSAAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSI I+K++ + A+ CRRP +KQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHSIHIMKVQEIAANKCRRPAIKQFHDSKIKFPLPHRVLRRQHNPRFTTKRPNTFF 176
>sp|O44480|RL18A_CAEEL 60S ribosomal protein L18a OS=Caenorhabditis elegans GN=rpl-20 PE=3
SV=2
Length = 180
Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 136/170 (80%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
L EY V+GRK+PTEKE +TP++KM+IFA + ++AKSRFWYF+ L++ KK+ GEI+S+K
Sbjct: 10 LNEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGEILSIKQ 69
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
+ EK+P +KN+G+WL+YDSR+G HNMYREYRD +V+GAVTQCYRDMGARHRA+A I I
Sbjct: 70 VFEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQADRIHI 129
Query: 127 IKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
+K++ VKA +R +K FHD++IRFPLP R+ +++F++ R T+F
Sbjct: 130 LKVQTVKAEDTKRAGIKMFHDAKIRFPLPHRVTKRKNLSVFTTARQNTHF 179
>sp|P0CX24|RL20B_YEAST 60S ribosomal protein L20-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL20B PE=1 SV=1
Length = 172
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 126/171 (73%), Gaps = 3/171 (1%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
KEY+VIGR+LPTE L++MRIFA ++++AKSR+WYFL++L K KK++GEIVS+
Sbjct: 4 FKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQ 63
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
I+E PTK+KNFG+W+RYDSRSGTHNMY+E RD+S AV Y+DM ARHRAR SI I
Sbjct: 64 INEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHI 123
Query: 127 IKL-EVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
+K+ E+ K + +R VKQF ++FPLP R+Q + FS +RP T++
Sbjct: 124 LKVAEIEKTADVKRQYVKQFLTKDLKFPLPHRVQKSTKT--FSYKRPSTFY 172
>sp|P0CX23|RL20A_YEAST 60S ribosomal protein L20-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL20A PE=1 SV=1
Length = 172
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 126/171 (73%), Gaps = 3/171 (1%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
KEY+VIGR+LPTE L++MRIFA ++++AKSR+WYFL++L K KK++GEIVS+
Sbjct: 4 FKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQ 63
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
I+E PTK+KNFG+W+RYDSRSGTHNMY+E RD+S AV Y+DM ARHRAR SI I
Sbjct: 64 INEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHI 123
Query: 127 IKL-EVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
+K+ E+ K + +R VKQF ++FPLP R+Q + FS +RP T++
Sbjct: 124 LKVAEIEKTADVKRQYVKQFLTKDLKFPLPHRVQKSTKT--FSYKRPSTFY 172
>sp|P05732|RL20_SCHPO 60S ribosomal protein L20 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl20a PE=1 SV=3
Length = 176
Score = 189 bits (481), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 124/174 (71%), Gaps = 4/174 (2%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
LKEY+V+GRK+PTE E + L++MR+FAP++ VAKSR+WYFL+ + K KK+TGEIV++
Sbjct: 3 LKEYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINE 62
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
ISE P K K FGIW+RYDSRSGTHNMY+E+RD + GAV Y DM ARHRAR SI+I
Sbjct: 63 ISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRI 122
Query: 127 IK-LEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRM---NLFSSRRPKTYF 176
+K +EV K RR VKQ + ++FPLP R V + +F+ RP T++
Sbjct: 123 LKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176
>sp|Q54MK8|RL18A_DICDI 60S ribosomal protein L18a OS=Dictyostelium discoideum GN=rpl18a
PE=3 SV=2
Length = 171
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 122/170 (71%), Gaps = 2/170 (1%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
+ E++V+GR +PTE++ +Y+MR+FA I AKSRFWYFL ++ K KKSTGEI+++
Sbjct: 3 IHEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNVTE 62
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
I E P K+KNFG+++RY+SRSGTHN+Y+EYRDL+ GAV+Q Y +M +RH AR SI I
Sbjct: 63 IFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSIHI 122
Query: 127 IKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
I ++ + AS RR KQFHDS+I+FPL RI + F + RP T+F
Sbjct: 123 IDIKEIAASLTRRANTKQFHDSKIKFPLTHRI--AKSKSTFVANRPNTFF 170
>sp|P51418|R18A2_ARATH 60S ribosomal protein L18a-2 OS=Arabidopsis thaliana GN=RPL18AB
PE=1 SV=2
Length = 178
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 113/146 (77%)
Query: 9 EYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKLIS 68
+Y+V+GR LPTEK+ +Y+M+++A +++ AKS+FWYFLR+LKK KKS G+++++ I
Sbjct: 8 QYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIY 67
Query: 69 EKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQIIK 128
EK+PT IKNFGIWLRY SR+G HNMY+EYRD +++GAV Q Y +M +RHR R IQIIK
Sbjct: 68 EKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIK 127
Query: 129 LEVVKASACRRPLVKQFHDSRIRFPL 154
V A C+R KQFH+S+I+FPL
Sbjct: 128 TATVPAKLCKRESTKQFHNSKIKFPL 153
>sp|Q9LUD4|R18A3_ARATH 60S ribosomal protein L18a-3 OS=Arabidopsis thaliana GN=RPL18AC
PE=2 SV=1
Length = 178
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 112/146 (76%)
Query: 9 EYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKLIS 68
+Y+V+GR LPTE ++ +Y+M+++ +++ AKS+FWYF+R+LKK KKS G+++++ I
Sbjct: 8 QYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAINEIF 67
Query: 69 EKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQIIK 128
EK+PT IKN+GIWLRY SR+G HNMY+EYRD +++G V Q Y +M +RHR R IQIIK
Sbjct: 68 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIK 127
Query: 129 LEVVKASACRRPLVKQFHDSRIRFPL 154
V A C+R + KQFH+S+I+FPL
Sbjct: 128 TATVPAKLCKREITKQFHNSKIKFPL 153
>sp|Q9ATF5|RL18A_CASSA 60S ribosomal protein L18a OS=Castanea sativa GN=RPL18A PE=2 SV=1
Length = 178
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 115/149 (77%)
Query: 9 EYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKLIS 68
+Y+V+GR LP+E ++ +Y+M+++A +++ AKS+FWYFLR+LKK KKS G+++++ I
Sbjct: 8 QYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 67
Query: 69 EKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQIIK 128
EK+PTKIKN+GIWLRY SR+G HNMY+EYRD +++GAV Q Y +M +RHR R IQIIK
Sbjct: 68 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRFPCIQIIK 127
Query: 129 LEVVKASACRRPLVKQFHDSRIRFPLPKR 157
+ A C+R KQFH+S+I+FPL R
Sbjct: 128 TATIPAKLCKRESSKQFHNSKIKFPLVTR 156
>sp|Q943F3|RL18A_ORYSJ 60S ribosomal protein L18a OS=Oryza sativa subsp. japonica
GN=RPL18A PE=2 SV=1
Length = 178
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 109/146 (74%)
Query: 9 EYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKLIS 68
+Y+V+GR LPT ++ +Y+M+++A +++ AKS+FWYFLR+LKK KKS G+I+++ I
Sbjct: 8 QYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEIF 67
Query: 69 EKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQIIK 128
EK+PT IKN+GIWLRY SR+G HNMY+EYRD +++GAV Q Y +M +RHR R IQIIK
Sbjct: 68 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIK 127
Query: 129 LEVVKASACRRPLVKQFHDSRIRFPL 154
V C+R KQFH S I+FPL
Sbjct: 128 TATVHFKLCKRDNTKQFHKSDIKFPL 153
>sp|P0DJ18|RL18A_TETTH 60S ribosomal protein L18a OS=Tetrahymena thermophila GN=RPL18A
PE=1 SV=1
Length = 189
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 108/172 (62%), Gaps = 3/172 (1%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
+++Y V +LP E+ + +MR+FA D++ AK++FWY +R+L K K+S G I+S+
Sbjct: 18 VRQYVVSAARLPIEQGTKPEILQMRVFARDEVHAKTKFWYNMRKLNKIKRSQGRILSVNE 77
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
I EKS +K +GI L+Y SR+ HNMY+EYRD+S++GAV+Q +DM HRA+ +IQI
Sbjct: 78 IYEKSLNTVKTYGIVLKYQSRTAIHNMYKEYRDVSLNGAVSQLIQDMAGNHRAQPDTIQI 137
Query: 127 IKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRM---NLFSSRRPKTY 175
I+ ++ +RP ++ ++FP+ K I + ++ + RP T+
Sbjct: 138 IRTATLEPKDIKRPATLAMRNAALKFPIVKTIHRPSEKKYRTVYKATRPTTF 189
>sp|A6UT94|RLX_META3 50S ribosomal protein LX OS=Methanococcus aeolicus (strain Nankai-3
/ ATCC BAA-1280) GN=rplX PE=3 SV=1
Length = 73
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 30/49 (61%)
Query: 95 REYRDLSVSGAVTQCYRDMGARHRARAHSIQIIKLEVVKASACRRPLVK 143
+EY+ + A+ + Y ++G++H + SI+II++ + A + P+++
Sbjct: 22 KEYKAMKEEDAIEKIYSEIGSKHNVKRASIKIIEVSEISADEVQDPILQ 70
>sp|A6UR53|RLX_METVS 50S ribosomal protein LX OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rplX PE=3 SV=1
Length = 76
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 95 REYRDLSVSGAVTQCYRDMGARHRARAHSIQIIKLEVVKASACRRPLVKQ 144
+EY L S A+ Y DMG++H + +IQ++++ + P+V++
Sbjct: 22 KEYNVLKESDALEIMYSDMGSKHSVKRANIQVLEISEISQEEVLDPIVRK 71
>sp|P54052|RLX_METJA 50S ribosomal protein LX OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rplX PE=3 SV=1
Length = 76
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 86 SRSGTHNMY--REYRDLSVSGAVTQCYRDMGARHRARAHSIQIIKLEVVKASACRRPLVK 143
S+ G +Y +EY+ L A+ Y + G R++ + I+I+ +E +K P++K
Sbjct: 12 SKKGKDPLYFRKEYKALKPEDALEILYSEFGGRYKVKRSRIKILNIEEIKPEDVTDPVLK 71
Query: 144 QF 145
+
Sbjct: 72 KL 73
>sp|Q03824|INP2_YEAST Inheritance of peroxisomes protein 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=INP2 PE=1 SV=1
Length = 705
Score = 33.1 bits (74), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 48 LRQLKKFKKSTGEIVSLKLISEKSPTKIKNFGIWL-----RYDSRSGT---HNMYREYRD 99
L +L F K++ ++ I + SPT N G L R RS + ++ R+
Sbjct: 502 LEELITFWKTSKICGNISRIQKVSPTNTINHGFHLDILKGRKSPRSSSVQGLSLERKVDF 561
Query: 100 LSVSGAVTQC---------YRDMGARHRARAHSIQIIKLEVVKASACRRPLVKQFHDSRI 150
+ V+ +V Y D + A S Q +++ + +CR+P KQ D+ +
Sbjct: 562 IDVAESVNDSFENDTELEEYEDYDCQEECSAGSRQNHRVDFIGKDSCRKPDFKQLSDNEL 621
Query: 151 RFPLPKRIQHVNRMN 165
R L +RI + + N
Sbjct: 622 RRKLDERILKLAQEN 636
>sp|A6ZMM2|INP2_YEAS7 Inheritance of peroxisomes protein 2 OS=Saccharomyces cerevisiae
(strain YJM789) GN=INP2 PE=3 SV=1
Length = 705
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 48 LRQLKKFKKSTGEIVSLKLISEKSPTKIKNFGIWL-----RYDSRSGT---HNMYREYRD 99
L +L F K++ ++ I + SPT N G L R RS + ++ R+
Sbjct: 502 LEELITFWKTSKICGNISRIQKVSPTNTINHGFHLDILKGRKSPRSSSVQGLSLERKVDF 561
Query: 100 LSVSGAVTQC---------YRDMGARHRARAHSIQIIKLEVVKASACRRPLVKQFHDSRI 150
+ V+ +V Y D + A S Q +++ + CR+P KQ D+ +
Sbjct: 562 IDVAESVNDSFENDTELEEYEDYDCQEECSAGSRQNHRVDFIGKDNCRKPDFKQLSDNEL 621
Query: 151 RFPLPKRIQHVNRMN 165
R L +RI + + N
Sbjct: 622 RRKLDERILKLAQEN 636
>sp|Q09773|MUG62_SCHPO Meiotically up-regulated gene 62 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug62 PE=1 SV=1
Length = 1428
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 3 AKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWY 46
A +E V+ + EK +I P +R ++P++++ S FWY
Sbjct: 465 ADTCYQEILVLKSSIEKEKVEIVPFLDIRKYSPNEVLCMSPFWY 508
>sp|Q75JF2|Y9532_DICDI Putative uncharacterized protein DDB_G0276139 OS=Dictyostelium
discoideum GN=DDB_G0276139 PE=4 SV=1
Length = 131
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 18/62 (29%)
Query: 131 VVKASACRRPLVKQFHDS---------RIRFP---------LPKRIQHVNRMNLFSSRRP 172
+ + +C +PL+ Q+HD R++FP +P+R+Q+ NL S +R
Sbjct: 53 IQSSPSCAQPLLTQYHDDGSTPLLIPERLQFPTSQNLTPRLIPERLQYPTSQNLTSIKRK 112
Query: 173 KT 174
T
Sbjct: 113 TT 114
>sp|A4G0D0|RLX_METM5 50S ribosomal protein LX OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rplX PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 10/50 (20%), Positives = 28/50 (56%)
Query: 95 REYRDLSVSGAVTQCYRDMGARHRARAHSIQIIKLEVVKASACRRPLVKQ 144
+EY + A+ Y +MG++H + +I+++++ + + P++K+
Sbjct: 22 KEYNVVKEDDALETMYSEMGSKHAVKRANIKVVEISEISEEDIQNPILKK 71
>sp|Q5JGT3|RLX_PYRKO 50S ribosomal protein LX OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rplX PE=3 SV=1
Length = 77
Score = 30.4 bits (67), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 74 KIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQIIKLEVVK 133
++K F + ++ +EYR L Y D+G++HR I I +E +K
Sbjct: 2 EVKVFRVKGTFERLGKKQPFTKEYRALKEEHVRELVYSDIGSKHRVPRTKIWIESIEEIK 61
Query: 134 ASACRRPLVKQF 145
P+V++
Sbjct: 62 PEEAEDPVVRRL 73
>sp|Q6M157|RLX_METMP 50S ribosomal protein LX OS=Methanococcus maripaludis (strain S2 /
LL) GN=rplX PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/50 (20%), Positives = 29/50 (58%)
Query: 95 REYRDLSVSGAVTQCYRDMGARHRARAHSIQIIKLEVVKASACRRPLVKQ 144
+EY L + A+ Y ++G++H + +I+++++ + + P++K+
Sbjct: 22 KEYNVLKENDALETMYSEIGSKHAVKRANIKVVEISEISVEEIQSPILKK 71
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,880,371
Number of Sequences: 539616
Number of extensions: 2281737
Number of successful extensions: 7020
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6988
Number of HSP's gapped (non-prelim): 32
length of query: 177
length of database: 191,569,459
effective HSP length: 110
effective length of query: 67
effective length of database: 132,211,699
effective search space: 8858183833
effective search space used: 8858183833
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)