Your job contains 1 sequence.
>psy10335
MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE
IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR
AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYFL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10335
(177 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010409 - symbol:RpL18A "Ribosomal protein L18A" s... 733 1.6e-72 1
UNIPROTKB|J9NVM6 - symbol:RPL18A "60S ribosomal protein L... 665 2.5e-65 1
UNIPROTKB|E2RL34 - symbol:RPL18A "60S ribosomal protein L... 660 8.5e-65 1
UNIPROTKB|F1S935 - symbol:RPL18A "Uncharacterized protein... 660 8.5e-65 1
ZFIN|ZDB-GENE-040426-1071 - symbol:rpl18a "ribosomal prot... 659 1.1e-64 1
UNIPROTKB|Q3T003 - symbol:RPL18A "60S ribosomal protein L... 657 1.8e-64 1
UNIPROTKB|Q02543 - symbol:RPL18A "60S ribosomal protein L... 657 1.8e-64 1
MGI|MGI:1924058 - symbol:Rpl18a "ribosomal protein L18A" ... 653 4.7e-64 1
RGD|1302976 - symbol:Rpl18a "ribosomal protein L18A" spec... 653 4.7e-64 1
UNIPROTKB|P62718 - symbol:Rpl18a "60S ribosomal protein L... 653 4.7e-64 1
UNIPROTKB|F1NPD3 - symbol:RPL18A "60S ribosomal protein L... 638 1.8e-62 1
RGD|1565566 - symbol:RGD1565566 "similar to 60S ribosomal... 587 4.6e-57 1
UNIPROTKB|B4DM74 - symbol:RPL18A "60S ribosomal protein L... 550 2.0e-55 2
UNIPROTKB|F1MHJ6 - symbol:F1MHJ6 "60S ribosomal protein L... 571 2.3e-55 1
WB|WBGene00004432 - symbol:rpl-20 species:6239 "Caenorhab... 568 4.8e-55 1
UNIPROTKB|G4N6U9 - symbol:MGG_03653 "60S ribosomal protei... 530 5.1e-51 1
SGD|S000004855 - symbol:RPL20A "Ribosomal 60S subunit pro... 490 8.8e-47 1
SGD|S000005839 - symbol:RPL20B "Ribosomal 60S subunit pro... 490 8.8e-47 1
CGD|CAL0003667 - symbol:RPL20B species:5476 "Candida albi... 487 1.8e-46 1
UNIPROTKB|Q5AML4 - symbol:RPL20B "60S ribosomal protein L... 487 1.8e-46 1
POMBASE|SPAC26A3.04 - symbol:rpl2002 "60S ribosomal prote... 479 1.3e-45 1
POMBASE|SPAC3A12.10 - symbol:rpl2001 "60S ribosomal prote... 479 1.3e-45 1
TAIR|locus:1005716700 - symbol:AT1G29965 species:3702 "Ar... 467 2.4e-44 1
TAIR|locus:2198269 - symbol:RPL18AA "60S ribosomal protei... 467 2.4e-44 1
DICTYBASE|DDB_G0285881 - symbol:rpl18a "S60 ribosomal pro... 465 3.9e-44 1
TAIR|locus:2040914 - symbol:AT2G34480 species:3702 "Arabi... 460 1.3e-43 1
ASPGD|ASPL0000056380 - symbol:AN0433 species:162425 "Emer... 456 3.5e-43 1
TAIR|locus:2089516 - symbol:AT3G14600 species:3702 "Arabi... 449 1.9e-42 1
GENEDB_PFALCIPARUM|PF13_0224 - symbol:PF13_0224 "60S ribo... 442 1.1e-41 1
UNIPROTKB|Q8IDS6 - symbol:PF13_0224 "60S ribosomal protei... 442 1.1e-41 1
UNIPROTKB|F1M6F8 - symbol:F1M6F8 "60S ribosomal protein L... 391 2.7e-36 1
>FB|FBgn0010409 [details] [associations]
symbol:RpL18A "Ribosomal protein L18A" species:7227
"Drosophila melanogaster" [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;NAS]
[GO:0005840 "ribosome" evidence=NAS] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0051298 "centrosome duplication"
evidence=IMP] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 EMBL:AE013599 GO:GO:0051298 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0000022 eggNOG:COG2157 KO:K02882
OMA:KSRYWYF PANTHER:PTHR10052 CTD:6142 GeneTree:ENSGT00390000015797
EMBL:X75339 EMBL:AY071222 PIR:S45364 RefSeq:NP_523774.1
UniGene:Dm.669 ProteinModelPortal:P41093 SMR:P41093 DIP:DIP-19043N
IntAct:P41093 MINT:MINT-321854 STRING:P41093 PaxDb:P41093
PRIDE:P41093 EnsemblMetazoa:FBtr0086947 GeneID:36985
KEGG:dme:Dmel_CG6510 FlyBase:FBgn0010409 InParanoid:P41093
OrthoDB:EOG44XGZX PhylomeDB:P41093 ChiTaRS:RPL18A GenomeRNAi:36985
NextBio:801363 Bgee:P41093 GermOnline:CG6510 Uniprot:P41093
Length = 177
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 137/176 (77%), Positives = 155/176 (88%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
M+AKGLLKEYEV+GRKLP+EKE TPLYKMRIFAPD+IVAKSRFWYFLRQLKKFKK+TGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IVS+K + E SP KIKNFGIWLRYDSRSGTHNMYREYRDL+V GAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQIIK++ + A+ RR VKQFHDS+I+FPL +R+ H LFS R+P+TYF
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>UNIPROTKB|J9NVM6 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10052
GeneTree:ENSGT00390000015797 EMBL:AAEX03012236
Ensembl:ENSCAFT00000020448 OMA:TNEVRSK Uniprot:J9NVM6
Length = 176
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 122/176 (69%), Positives = 145/176 (82%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + AS CRRP VKQFHDS+I+FPLP R+ H F+++RP T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLHRQHKPRFTTKRPNTFF 176
>UNIPROTKB|E2RL34 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052
CTD:6142 GeneTree:ENSGT00390000015797 EMBL:AAEX03012289
RefSeq:XP_533877.1 Ensembl:ENSCAFT00000024008 GeneID:476672
KEGG:cfa:476672 NextBio:20852289 Uniprot:E2RL34
Length = 176
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 121/176 (68%), Positives = 145/176 (82%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K + PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCRTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + AS CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>UNIPROTKB|F1S935 [details] [associations]
symbol:RPL18A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
OMA:KSRYWYF PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
EMBL:CU463003 Ensembl:ENSSSCT00000015175 Uniprot:F1S935
Length = 224
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 121/176 (68%), Positives = 145/176 (82%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K + PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 49 MKASGTLREYKVVGRCLPTPKCRTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 108
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 109 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 168
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + AS CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 169 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 224
>ZFIN|ZDB-GENE-040426-1071 [details] [associations]
symbol:rpl18a "ribosomal protein L18a"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 ZFIN:ZDB-GENE-040426-1071
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:BX890562
eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 CTD:6142 GeneTree:ENSGT00390000015797
HOVERGEN:HBG066281 OrthoDB:EOG40P47V EMBL:AL928834 EMBL:BC049045
IPI:IPI00500619 RefSeq:NP_957354.1 UniGene:Dr.51263
ProteinModelPortal:Q7ZWJ4 STRING:Q7ZWJ4 PRIDE:Q7ZWJ4
Ensembl:ENSDART00000030215 GeneID:394035 KEGG:dre:394035
InParanoid:Q7ZWJ4 NextBio:20814997 ArrayExpress:Q7ZWJ4 Bgee:Q7ZWJ4
Uniprot:Q7ZWJ4
Length = 176
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 118/176 (67%), Positives = 146/176 (82%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LP+ K PLY+MRIFAP+ +VAKSRFWYF+ QL+K KK++GE
Sbjct: 1 MKASGTLREYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV L+ EKSP K+KNFGIWLRYDSRSGTHNMYREYRDL+ SGAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGLVFEKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AH+IQI+K++V+ A+ CRRP +KQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHAIQIMKVQVIAANKCRRPAIKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>UNIPROTKB|Q3T003 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9913
"Bos taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 EMBL:BC102624 IPI:IPI00707386
RefSeq:NP_001028791.1 UniGene:Bt.49052 ProteinModelPortal:Q3T003
SMR:Q3T003 STRING:Q3T003 PRIDE:Q3T003 Ensembl:ENSBTAT00000021033
GeneID:404142 KEGG:bta:404142 CTD:6142 GeneTree:ENSGT00390000015797
HOVERGEN:HBG066281 InParanoid:Q3T003 OrthoDB:EOG40P47V
NextBio:20817578 Uniprot:Q3T003
Length = 176
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 121/176 (68%), Positives = 144/176 (81%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + AS CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>UNIPROTKB|Q02543 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9606
"Homo sapiens" [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0003735 "structural constituent of ribosome" evidence=NAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 GO:GO:0003723
GO:GO:0003735 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 eggNOG:COG2157
HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052
CTD:6142 HOVERGEN:HBG066281 EMBL:L05093 EMBL:X80822 EMBL:AC005796
EMBL:BC007512 EMBL:BC066319 EMBL:BC071920 IPI:IPI00026202
PIR:S47353 RefSeq:NP_000971.1 UniGene:Hs.337766
ProteinModelPortal:Q02543 SMR:Q02543 IntAct:Q02543
MINT:MINT-5000271 STRING:Q02543 PhosphoSite:Q02543 DMDM:730538
SWISS-2DPAGE:Q02543 PaxDb:Q02543 PeptideAtlas:Q02543 PRIDE:Q02543
DNASU:6142 Ensembl:ENST00000222247 GeneID:6142 KEGG:hsa:6142
UCSC:uc002nhp.2 GeneCards:GC19P017970 HGNC:HGNC:10311 MIM:604178
neXtProt:NX_Q02543 PharmGKB:PA34680 InParanoid:Q02543
GenomeRNAi:6142 NextBio:23861 ArrayExpress:Q02543 Bgee:Q02543
CleanEx:HS_RPL18A Genevestigator:Q02543 GermOnline:ENSG00000105640
Uniprot:Q02543
Length = 176
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 121/176 (68%), Positives = 144/176 (81%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + AS CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>MGI|MGI:1924058 [details] [associations]
symbol:Rpl18a "ribosomal protein L18A" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 MGI:MGI:1924058 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882
OMA:KSRYWYF PANTHER:PTHR10052 CTD:6142 GeneTree:ENSGT00390000015797
HOVERGEN:HBG066281 OrthoDB:EOG40P47V EMBL:AK010983 EMBL:AK146543
EMBL:AK161942 EMBL:AK162047 EMBL:BC037146 IPI:IPI00162790
RefSeq:NP_084027.1 UniGene:Mm.379251 UniGene:Mm.431334
ProteinModelPortal:P62717 SMR:P62717 STRING:P62717
PhosphoSite:P62717 PaxDb:P62717 PRIDE:P62717
Ensembl:ENSMUST00000054220 GeneID:76808 KEGG:mmu:76808
UCSC:uc009mca.2 InParanoid:P62717 NextBio:345857 Bgee:P62717
CleanEx:MM_RPL18A Genevestigator:P62717
GermOnline:ENSMUSG00000045128 Uniprot:P62717
Length = 176
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 120/176 (68%), Positives = 143/176 (81%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + A CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>RGD|1302976 [details] [associations]
symbol:Rpl18a "ribosomal protein L18A" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA;ISO]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 RGD:1302976 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882
PANTHER:PTHR10052 CTD:6142 HOVERGEN:HBG066281 OrthoDB:EOG40P47V
EMBL:X14181 EMBL:BC058498 IPI:IPI00192257 PIR:JC4231
RefSeq:NP_997675.1 UniGene:Rn.105821 ProteinModelPortal:P62718
SMR:P62718 IntAct:P62718 STRING:P62718 PhosphoSite:P62718
PRIDE:P62718 GeneID:290641 KEGG:rno:290641 UCSC:RGD:1302976
InParanoid:P62718 NextBio:631381 ArrayExpress:P62718
Genevestigator:P62718 GermOnline:ENSRNOG00000018795 Uniprot:P62718
Length = 176
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 120/176 (68%), Positives = 143/176 (81%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + A CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>UNIPROTKB|P62718 [details] [associations]
symbol:Rpl18a "60S ribosomal protein L18a" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 RGD:1302976 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882
PANTHER:PTHR10052 CTD:6142 HOVERGEN:HBG066281 OrthoDB:EOG40P47V
EMBL:X14181 EMBL:BC058498 IPI:IPI00192257 PIR:JC4231
RefSeq:NP_997675.1 UniGene:Rn.105821 ProteinModelPortal:P62718
SMR:P62718 IntAct:P62718 STRING:P62718 PhosphoSite:P62718
PRIDE:P62718 GeneID:290641 KEGG:rno:290641 UCSC:RGD:1302976
InParanoid:P62718 NextBio:631381 ArrayExpress:P62718
Genevestigator:P62718 GermOnline:ENSRNOG00000018795 Uniprot:P62718
Length = 176
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 120/176 (68%), Positives = 143/176 (81%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AHSIQI+K+E + A CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>UNIPROTKB|F1NPD3 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
OMA:KSRYWYF PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
EMBL:AADN02009919 IPI:IPI00594850 Ensembl:ENSGALT00000015981
Uniprot:F1NPD3
Length = 182
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 116/170 (68%), Positives = 141/170 (82%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
L+EY+V+GR LPT K + PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GEIV
Sbjct: 13 LREYKVVGRCLPTPKCRTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 72
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
+ EK+P ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRARAHSIQI
Sbjct: 73 VYEKTPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 132
Query: 127 IKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
+K+E + AS CRRP VKQFHDS+I+FPLP R+ F+++RP T+F
Sbjct: 133 MKVEQIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 182
>RGD|1565566 [details] [associations]
symbol:RGD1565566 "similar to 60S ribosomal protein L18a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 RGD:1565566 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
IPI:IPI00392231 Ensembl:ENSRNOT00000068694 Uniprot:F1M0K6
Length = 176
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 109/172 (63%), Positives = 134/172 (77%)
Query: 5 GLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSL 64
G L+EY+++GR LPT K PLY+MRIFAP+ +VAKS FW+F+ QLKK KKS+GEIV
Sbjct: 5 GTLREYKMVGRCLPTPKCHSPPLYRMRIFAPNHVVAKSGFWHFVSQLKKMKKSSGEIVYC 64
Query: 65 KLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSI 124
+ EKSP ++KNFGIWLRYDSRSGTHNMYREYR L+ +G VTQCY+DMGARH ARAHSI
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRYLTTAGLVTQCYQDMGARHCARAHSI 124
Query: 125 QIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
QI+K+ + A CRRP VKQFHDS+I+FPLP R+ F+ +RP T+F
Sbjct: 125 QIMKVVEIAAGKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTIKRPNTFF 176
>UNIPROTKB|B4DM74 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AC007201 PANTHER:PTHR10052 HOVERGEN:HBG066281
EMBL:AC005796 UniGene:Hs.337766 HGNC:HGNC:10311 EMBL:AK297323
IPI:IPI00847774 SMR:B4DM74 STRING:B4DM74 Ensembl:ENST00000420197
Uniprot:B4DM74
Length = 154
Score = 550 (198.7 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 104/149 (69%), Positives = 121/149 (81%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K PLY+MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWLRYDSRSGTHNMYREYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSR 149
AHSIQI+K+E + AS CRR +F R
Sbjct: 121 AHSIQIMKVEEIAASKCRRQHKPRFTTKR 149
Score = 39 (18.8 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 157 RIQHVNRMNLFSSRRPKTYF 176
R QH R F+++RP T+F
Sbjct: 138 RRQHKPR---FTTKRPNTFF 154
>UNIPROTKB|F1MHJ6 [details] [associations]
symbol:F1MHJ6 "60S ribosomal protein L18a" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
EMBL:DAAA02029600 IPI:IPI00714344 PRIDE:F1MHJ6
Ensembl:ENSBTAT00000012903 OMA:IASKFHD NextBio:20866654
Uniprot:F1MHJ6
Length = 168
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 111/176 (63%), Positives = 135/176 (76%)
Query: 1 MKAKGLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
MKA G L+EY+V+GR LPT K + PLY MRIFAP+ +VAKSRFWYF+ QLKK KKS+GE
Sbjct: 1 MKASGTLQEYKVVGRCLPTPKCRTLPLYCMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
IV + EKSP ++KNFGIWL YDSRSGTHNM REYRDL+ +GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLHYDSRSGTHNMDREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
AH IQI+K+E + AS +FHDS+I+FPLP R+ F+++RP T+F
Sbjct: 121 AHLIQIMKVEEIIAS--------KFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 168
>WB|WBGene00004432 [details] [associations]
symbol:rpl-20 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0006412 GO:GO:0000003 GO:GO:0005840 GO:GO:0003735
EMBL:FO081039 eggNOG:COG2157 HOGENOM:HOG000211377 OMA:KSRYWYF
PANTHER:PTHR10052 GeneTree:ENSGT00390000015797 PIR:B88677
PIR:T32612 ProteinModelPortal:O44480 SMR:O44480 MINT:MINT-1093825
STRING:O44480 PaxDb:O44480 EnsemblMetazoa:E04A4.8.1
EnsemblMetazoa:E04A4.8.2 UCSC:E04A4.8.1 WormBase:E04A4.8
InParanoid:O44480 NextBio:955817 Uniprot:O44480
Length = 180
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 100/176 (56%), Positives = 139/176 (78%)
Query: 2 KAKG-LLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGE 60
KA G L EY V+GRK+PTEKE +TP++KM+IFA + ++AKSRFWYF+ L++ KK+ GE
Sbjct: 4 KALGETLNEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGE 63
Query: 61 IVSLKLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRAR 120
I+S+K + EK+P +KN+G+WL+YDSR+G HNMYREYRD +V+GAVTQCYRDMGARHRA+
Sbjct: 64 ILSIKQVFEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQ 123
Query: 121 AHSIQIIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
A I I+K++ VKA +R +K FHD++IRFPLP R+ +++F++ R T+F
Sbjct: 124 ADRIHILKVQTVKAEDTKRAGIKMFHDAKIRFPLPHRVTKRKNLSVFTTARQNTHF 179
>UNIPROTKB|G4N6U9 [details] [associations]
symbol:MGG_03653 "60S ribosomal protein L20" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0043581 EMBL:CM001234 KO:K02882 PANTHER:PTHR10052
RefSeq:XP_003716235.1 ProteinModelPortal:G4N6U9
EnsemblFungi:MGG_03653T0 GeneID:2676638 KEGG:mgr:MGG_03653
Uniprot:G4N6U9
Length = 174
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 99/172 (57%), Positives = 128/172 (74%)
Query: 5 GLLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSL 64
G L+EY+VIGR LPTE LY+MRIFAP+++VAKSR+WYFLR LKK KK+TGEIV++
Sbjct: 2 GRLQEYQVIGRHLPTESNPTPSLYRMRIFAPNEVVAKSRYWYFLRGLKKVKKATGEIVAV 61
Query: 65 KLISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSI 124
I EK P K+KNFGIW+RY+SRSGTHNMY+EYR+LS + AV Y+DM ARHRAR SI
Sbjct: 62 NKIHEKHPLKVKNFGIWIRYNSRSGTHNMYKEYRELSRTAAVEAMYQDMAARHRARFASI 121
Query: 125 QIIKL-EVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTY 175
I+++ E+ K +RP +KQ + FPLP R+ +N +FS+RRP T+
Sbjct: 122 HILRVVELEKTDDIKRPYIKQLTTKGLTFPLPHRVPKINNKKIFSARRPSTF 173
>SGD|S000004855 [details] [associations]
symbol:RPL20A "Ribosomal 60S subunit protein L20A"
species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0002181
"cytoplasmic translation" evidence=TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 SGD:S000004855 EMBL:BK006946 GO:GO:0003735
GO:GO:0002181 PDB:4B6A PDBsum:4B6A EMBL:Z48756 GO:GO:0022625
KO:K02882 PANTHER:PTHR10052 PDB:3U5E PDB:3U5I PDBsum:3U5E
PDBsum:3U5I EMBL:EF138821 PIR:S56056 RefSeq:NP_013969.3
RefSeq:NP_014957.2 ProteinModelPortal:P0CX23 SMR:P0CX23
EnsemblFungi:YMR242C EnsemblFungi:YOR312C GeneID:854489
GeneID:855283 KEGG:sce:YMR242C KEGG:sce:YOR312C CYGD:YMR242c
NextBio:976816 ArrayExpress:P0CX23 Uniprot:P0CX23
Length = 172
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 93/170 (54%), Positives = 126/170 (74%)
Query: 8 KEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKLI 67
KEY+VIGR+LPTE L++MRIFA ++++AKSR+WYFL++L K KK++GEIVS+ I
Sbjct: 5 KEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQI 64
Query: 68 SEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQII 127
+E PTK+KNFG+W+RYDSRSGTHNMY+E RD+S AV Y+DM ARHRAR SI I+
Sbjct: 65 NEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHIL 124
Query: 128 KL-EVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
K+ E+ K + +R VKQF ++FPLP R+Q + FS +RP T++
Sbjct: 125 KVAEIEKTADVKRQYVKQFLTKDLKFPLPHRVQKSTKT--FSYKRPSTFY 172
>SGD|S000005839 [details] [associations]
symbol:RPL20B "Ribosomal 60S subunit protein L20B"
species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 SGD:S000005839 EMBL:BK006948 GO:GO:0003735
GO:GO:0002181 EMBL:X90565 GO:GO:0022625 KO:K02882 PANTHER:PTHR10052
GeneTree:ENSGT00390000015797 PIR:S56056 RefSeq:NP_013969.3
RefSeq:NP_014957.2 EnsemblFungi:YMR242C EnsemblFungi:YOR312C
GeneID:854489 GeneID:855283 KEGG:sce:YMR242C KEGG:sce:YOR312C
NextBio:976816 EMBL:Z75220 EMBL:EF138822 ProteinModelPortal:P0CX24
SMR:P0CX24 CYGD:YOR312c ArrayExpress:P0CX24 GermOnline:YOR312C
Uniprot:P0CX24
Length = 172
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 93/170 (54%), Positives = 126/170 (74%)
Query: 8 KEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKLI 67
KEY+VIGR+LPTE L++MRIFA ++++AKSR+WYFL++L K KK++GEIVS+ I
Sbjct: 5 KEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQI 64
Query: 68 SEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQII 127
+E PTK+KNFG+W+RYDSRSGTHNMY+E RD+S AV Y+DM ARHRAR SI I+
Sbjct: 65 NEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHIL 124
Query: 128 KL-EVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
K+ E+ K + +R VKQF ++FPLP R+Q + FS +RP T++
Sbjct: 125 KVAEIEKTADVKRQYVKQFLTKDLKFPLPHRVQKSTKT--FSYKRPSTFY 172
>CGD|CAL0003667 [details] [associations]
symbol:RPL20B species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 CGD:CAL0003667
GO:GO:0009986 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000006 eggNOG:COG2157 KO:K02882 PANTHER:PTHR10052
RefSeq:XP_722704.1 ProteinModelPortal:Q5AML4 STRING:Q5AML4
GeneID:3635615 KEGG:cal:CaO19.4632 Uniprot:Q5AML4
Length = 172
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 94/171 (54%), Positives = 124/171 (72%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
L EY+VIGR LPTE L++MRIFAP+ +VAKSR+WYFL++L K KK++GEIVS+ +
Sbjct: 4 LNEYQVIGRNLPTESVPEPKLFRMRIFAPNTVVAKSRYWYFLQKLHKVKKASGEIVSVNI 63
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
ISE PTK+K FGIWLRY+SRSG HNMY+EYRD++ GAV Y+D+ ARHRAR SI I
Sbjct: 64 ISEAKPTKVKTFGIWLRYESRSGIHNMYKEYRDVTRVGAVETMYQDLAARHRARFRSIHI 123
Query: 127 IKL-EVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
+K+ E+ K +R VKQF ++FPLP R+Q + LF + P T++
Sbjct: 124 LKVVELEKTDDVKRQYVKQFLTKDLKFPLPHRVQKSKK--LFQATAPTTFY 172
>UNIPROTKB|Q5AML4 [details] [associations]
symbol:RPL20B "60S ribosomal protein L20" species:237561
"Candida albicans SC5314" [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 CGD:CAL0003667 GO:GO:0009986 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000006 eggNOG:COG2157
KO:K02882 PANTHER:PTHR10052 RefSeq:XP_722704.1
ProteinModelPortal:Q5AML4 STRING:Q5AML4 GeneID:3635615
KEGG:cal:CaO19.4632 Uniprot:Q5AML4
Length = 172
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 94/171 (54%), Positives = 124/171 (72%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
L EY+VIGR LPTE L++MRIFAP+ +VAKSR+WYFL++L K KK++GEIVS+ +
Sbjct: 4 LNEYQVIGRNLPTESVPEPKLFRMRIFAPNTVVAKSRYWYFLQKLHKVKKASGEIVSVNI 63
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
ISE PTK+K FGIWLRY+SRSG HNMY+EYRD++ GAV Y+D+ ARHRAR SI I
Sbjct: 64 ISEAKPTKVKTFGIWLRYESRSGIHNMYKEYRDVTRVGAVETMYQDLAARHRARFRSIHI 123
Query: 127 IKL-EVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
+K+ E+ K +R VKQF ++FPLP R+Q + LF + P T++
Sbjct: 124 LKVVELEKTDDVKRQYVKQFLTKDLKFPLPHRVQKSKK--LFQATAPTTFY 172
>POMBASE|SPAC26A3.04 [details] [associations]
symbol:rpl2002 "60S ribosomal protein L20 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 PomBase:SPAC26A3.04 PomBase:SPAC3A12.10
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003735
GO:GO:0002181 GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377
KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052 EMBL:AF127913 EMBL:AB009012
PIR:S10051 PIR:T38392 PIR:T43301 RefSeq:NP_593336.1
RefSeq:NP_594147.1 ProteinModelPortal:P05732 IntAct:P05732
MINT:MINT-4686805 STRING:P05732 PRIDE:P05732
EnsemblFungi:SPAC26A3.04.1 EnsemblFungi:SPAC3A12.10.1
GeneID:2542093 GeneID:2542725 KEGG:spo:SPAC26A3.04
KEGG:spo:SPAC3A12.10 OrthoDB:EOG46MFTW NextBio:20803166
Uniprot:P05732
Length = 176
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 94/174 (54%), Positives = 124/174 (71%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
LKEY+V+GRK+PTE E + L++MR+FAP++ VAKSR+WYFL+ + K KK+TGEIV++
Sbjct: 3 LKEYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINE 62
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
ISE P K K FGIW+RYDSRSGTHNMY+E+RD + GAV Y DM ARHRAR SI+I
Sbjct: 63 ISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRI 122
Query: 127 IKL-EVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRM---NLFSSRRPKTYF 176
+K+ EV K RR VKQ + ++FPLP R V + +F+ RP T++
Sbjct: 123 LKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176
>POMBASE|SPAC3A12.10 [details] [associations]
symbol:rpl2001 "60S ribosomal protein L20a (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190
PomBase:SPAC26A3.04 PomBase:SPAC3A12.10 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 EMBL:AF127913 EMBL:AB009012 PIR:S10051 PIR:T38392
PIR:T43301 RefSeq:NP_593336.1 RefSeq:NP_594147.1
ProteinModelPortal:P05732 IntAct:P05732 MINT:MINT-4686805
STRING:P05732 PRIDE:P05732 EnsemblFungi:SPAC26A3.04.1
EnsemblFungi:SPAC3A12.10.1 GeneID:2542093 GeneID:2542725
KEGG:spo:SPAC26A3.04 KEGG:spo:SPAC3A12.10 OrthoDB:EOG46MFTW
NextBio:20803166 Uniprot:P05732
Length = 176
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 94/174 (54%), Positives = 124/174 (71%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
LKEY+V+GRK+PTE E + L++MR+FAP++ VAKSR+WYFL+ + K KK+TGEIV++
Sbjct: 3 LKEYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINE 62
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
ISE P K K FGIW+RYDSRSGTHNMY+E+RD + GAV Y DM ARHRAR SI+I
Sbjct: 63 ISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRI 122
Query: 127 IKL-EVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRM---NLFSSRRPKTYF 176
+K+ EV K RR VKQ + ++FPLP R V + +F+ RP T++
Sbjct: 123 LKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176
>TAIR|locus:1005716700 [details] [associations]
symbol:AT1G29965 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 EnsemblPlants:AT1G29965.1
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 HOGENOM:HOG000211377 KO:K02882
ProtClustDB:CLSN2683643 PANTHER:PTHR10052 UniGene:At.40639
EMBL:AY128411 EMBL:BT000059 IPI:IPI00541044 RefSeq:NP_849729.1
ProteinModelPortal:Q8L7K0 SMR:Q8L7K0 STRING:Q8L7K0 PRIDE:Q8L7K0
DNASU:839875 GeneID:839875 KEGG:ath:AT1G29965 TAIR:At1g29965
InParanoid:Q8L7K0 PhylomeDB:Q8L7K0 ArrayExpress:Q8L7K0
Genevestigator:Q8L7K0 Uniprot:Q8L7K0
Length = 178
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 85/172 (49%), Positives = 126/172 (73%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
L +Y+V+GR LPTEK++ +Y+M+++A ++++AKS+FWY+LR+ KK KKS G+++++
Sbjct: 6 LHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINE 65
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
I EK+PT IKNFGIWLRY SR+G HNMY+EYRD +++GAV Q Y +M +RHR R IQI
Sbjct: 66 IFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQI 125
Query: 127 IKLEVVKASACRRPLVKQFHDSRIRFPLP-KRIQHVNRM--NLFSSRRPKTY 175
IK V AS C+R KQFH+S+I+FPL ++++ R F + +P +
Sbjct: 126 IKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLF 177
>TAIR|locus:2198269 [details] [associations]
symbol:RPL18AA "60S ribosomal protein L18A-1"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0006914 "autophagy"
evidence=RCA] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
EMBL:CP002684 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC022455 eggNOG:COG2157 KO:K02882 PANTHER:PTHR10052
IPI:IPI00846921 RefSeq:NP_001077626.1 UniGene:At.40639
ProteinModelPortal:A8MRF3 SMR:A8MRF3 STRING:A8MRF3 PaxDb:A8MRF3
EnsemblPlants:AT1G29970.2 GeneID:839876 KEGG:ath:AT1G29970
HOGENOM:HOG000015168 OMA:LAKSKFW ProtClustDB:CLSN2699051
Genevestigator:A8MRF3 Uniprot:A8MRF3
Length = 312
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 85/172 (49%), Positives = 126/172 (73%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
L +Y+V+GR LPTEK++ +Y+M+++A ++++AKS+FWY+LR+ KK KKS G+++++
Sbjct: 140 LHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINE 199
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
I EK+PT IKNFGIWLRY SR+G HNMY+EYRD +++GAV Q Y +M +RHR R IQI
Sbjct: 200 IFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQI 259
Query: 127 IKLEVVKASACRRPLVKQFHDSRIRFPLP-KRIQHVNRM--NLFSSRRPKTY 175
IK V AS C+R KQFH+S+I+FPL ++++ R F + +P +
Sbjct: 260 IKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLF 311
>DICTYBASE|DDB_G0285881 [details] [associations]
symbol:rpl18a "S60 ribosomal protein L18a"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190
dictyBase:DDB_G0285881 GenomeReviews:CM000153_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000082 eggNOG:COG2157
KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052 RefSeq:XP_637982.2
ProteinModelPortal:Q54MK8 STRING:Q54MK8 PRIDE:Q54MK8
EnsemblProtists:DDB0233692 GeneID:8625334 KEGG:ddi:DDB_G0285881
ProtClustDB:CLSZ2447207 Uniprot:Q54MK8
Length = 171
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 88/170 (51%), Positives = 122/170 (71%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
+ E++V+GR +PTE++ +Y+MR+FA I AKSRFWYFL ++ K KKSTGEI+++
Sbjct: 3 IHEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNVTE 62
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
I E P K+KNFG+++RY+SRSGTHN+Y+EYRDL+ GAV+Q Y +M +RH AR SI I
Sbjct: 63 IFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSIHI 122
Query: 127 IKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKTYF 176
I ++ + AS RR KQFHDS+I+FPL RI + F + RP T+F
Sbjct: 123 IDIKEIAASLTRRANTKQFHDSKIKFPLTHRI--AKSKSTFVANRPNTFF 170
>TAIR|locus:2040914 [details] [associations]
symbol:AT2G34480 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 EnsemblPlants:AT2G34480.1 GO:GO:0005886
GO:GO:0005774 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0003735 EMBL:AC004077 EMBL:AC004481 GO:GO:0022625
EMBL:AY042803 EMBL:AY120778 EMBL:BT000076 EMBL:BT006559 EMBL:Z18039
IPI:IPI00548475 PIR:T02335 RefSeq:NP_180995.1 UniGene:At.23545
ProteinModelPortal:P51418 SMR:P51418 IntAct:P51418 STRING:P51418
PaxDb:P51418 PRIDE:P51418 GeneID:818011 KEGG:ath:AT2G34480
TAIR:At2g34480 eggNOG:COG2157 HOGENOM:HOG000211377
InParanoid:P51418 KO:K02882 OMA:KSRYWYF PhylomeDB:P51418
ProtClustDB:CLSN2683643 Genevestigator:P51418 GermOnline:AT2G34480
PANTHER:PTHR10052 Uniprot:P51418
Length = 178
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 84/170 (49%), Positives = 124/170 (72%)
Query: 9 EYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKLIS 68
+Y+V+GR LPTEK+ +Y+M+++A +++ AKS+FWYFLR+LKK KKS G+++++ I
Sbjct: 8 QYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIY 67
Query: 69 EKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQIIK 128
EK+PT IKNFGIWLRY SR+G HNMY+EYRD +++GAV Q Y +M +RHR R IQIIK
Sbjct: 68 EKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIK 127
Query: 129 LEVVKASACRRPLVKQFHDSRIRFPLP-KRIQHVNRM--NLFSSRRPKTY 175
V A C+R KQFH+S+I+FPL ++++ +R + + +P +
Sbjct: 128 TATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLF 177
>ASPGD|ASPL0000056380 [details] [associations]
symbol:AN0433 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 EMBL:BN001308 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 OMA:KSRYWYF PANTHER:PTHR10052
EnsemblFungi:CADANIAT00002262 Uniprot:C8VTE9
Length = 148
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 87/147 (59%), Positives = 110/147 (74%)
Query: 30 MRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKLISEKSPTKIKNFGIWLRYDSRSG 89
MRIFAP+ +VAKSRFWYFL QL+K KK+ GEIVSL +I EK P K+KNFGIWLRYDSRSG
Sbjct: 1 MRIFAPNAVVAKSRFWYFLTQLRKVKKANGEIVSLNVIHEKRPLKVKNFGIWLRYDSRSG 60
Query: 90 THNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQIIKL-EVVKASACRRPLVKQFHDS 148
THNMY+E+R++S + AV Y+DM ARHRAR SI I+K+ E+ KA + RRP +KQ
Sbjct: 61 THNMYKEFREMSRTEAVEALYQDMAARHRARFGSIHILKVVEIEKADSIRRPYIKQLLQK 120
Query: 149 RIRFPLPKRIQHVNRMNLFSSRRPKTY 175
++FPLP R N+ +F+ RP T+
Sbjct: 121 NLKFPLPHRSATGNKKKVFAYSRPSTF 147
>TAIR|locus:2089516 [details] [associations]
symbol:AT3G14600 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 EnsemblPlants:AT3G14600.1 GO:GO:0009506
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 EMBL:AB023038 GO:GO:0022625 eggNOG:COG2157
HOGENOM:HOG000211377 KO:K02882 ProtClustDB:CLSN2683643
PANTHER:PTHR10052 EMBL:AY072540 EMBL:AY097377 EMBL:AY088351
IPI:IPI00548788 RefSeq:NP_188078.1 UniGene:At.22267
ProteinModelPortal:Q9LUD4 SMR:Q9LUD4 STRING:Q9LUD4 PaxDb:Q9LUD4
PRIDE:Q9LUD4 GeneID:820688 KEGG:ath:AT3G14600 TAIR:At3g14600
InParanoid:Q9LUD4 OMA:LCKREIT PhylomeDB:Q9LUD4
Genevestigator:Q9LUD4 GermOnline:AT3G14600 Uniprot:Q9LUD4
Length = 178
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 77/146 (52%), Positives = 112/146 (76%)
Query: 9 EYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKLIS 68
+Y+V+GR LPTE ++ +Y+M+++ +++ AKS+FWYF+R+LKK KKS G+++++ I
Sbjct: 8 QYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAINEIF 67
Query: 69 EKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQIIK 128
EK+PT IKN+GIWLRY SR+G HNMY+EYRD +++G V Q Y +M +RHR R IQIIK
Sbjct: 68 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIK 127
Query: 129 LEVVKASACRRPLVKQFHDSRIRFPL 154
V A C+R + KQFH+S+I+FPL
Sbjct: 128 TATVPAKLCKREITKQFHNSKIKFPL 153
>GENEDB_PFALCIPARUM|PF13_0224 [details] [associations]
symbol:PF13_0224 "60S ribosomal subunit protein
L18, putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 EMBL:AL844509
GO:GO:0022625 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 ProtClustDB:CLSZ2447207 RefSeq:XP_001350134.1
ProteinModelPortal:Q8IDS6 PRIDE:Q8IDS6
EnsemblProtists:PF13_0224:mRNA GeneID:814191 KEGG:pfa:PF13_0224
EuPathDB:PlasmoDB:PF3D7_1341200 Uniprot:Q8IDS6
Length = 184
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 83/172 (48%), Positives = 120/172 (69%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
+ +Y ++GR +PT K+K +Y+M IFA +D AKSRFWYF++++ K KKS GE+++ +
Sbjct: 13 IHQYHIVGRAIPTAKDKNPNVYRMCIFAKNDTNAKSRFWYFMKKINKLKKSNGELLACEQ 72
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
I E+ P ++KN+G+ LRYDSR+GTHNMY+E+RD + GA+ Q Y +M RHRARA SI I
Sbjct: 73 IKERFPLRVKNYGVLLRYDSRTGTHNMYKEFRDTTKEGAIAQLYSEMAGRHRARASSINI 132
Query: 127 IKLEVVKASACRRPLVKQFHDSRIRFP---LPKRIQHVNRMNLFSSRRPKTY 175
I++ + +S RRP +KQ R+RFP LP +Q R F+S+RP TY
Sbjct: 133 IRISEISSSLVRRPHIKQLLKRRLRFPALHLPT-LQKEYRKK-FASKRPSTY 182
>UNIPROTKB|Q8IDS6 [details] [associations]
symbol:PF13_0224 "60S ribosomal protein L18a" species:36329
"Plasmodium falciparum 3D7" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735
EMBL:AL844509 GO:GO:0022625 HOGENOM:HOG000211377 KO:K02882
OMA:KSRYWYF PANTHER:PTHR10052 ProtClustDB:CLSZ2447207
RefSeq:XP_001350134.1 ProteinModelPortal:Q8IDS6 PRIDE:Q8IDS6
EnsemblProtists:PF13_0224:mRNA GeneID:814191 KEGG:pfa:PF13_0224
EuPathDB:PlasmoDB:PF3D7_1341200 Uniprot:Q8IDS6
Length = 184
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 83/172 (48%), Positives = 120/172 (69%)
Query: 7 LKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLKL 66
+ +Y ++GR +PT K+K +Y+M IFA +D AKSRFWYF++++ K KKS GE+++ +
Sbjct: 13 IHQYHIVGRAIPTAKDKNPNVYRMCIFAKNDTNAKSRFWYFMKKINKLKKSNGELLACEQ 72
Query: 67 ISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQI 126
I E+ P ++KN+G+ LRYDSR+GTHNMY+E+RD + GA+ Q Y +M RHRARA SI I
Sbjct: 73 IKERFPLRVKNYGVLLRYDSRTGTHNMYKEFRDTTKEGAIAQLYSEMAGRHRARASSINI 132
Query: 127 IKLEVVKASACRRPLVKQFHDSRIRFP---LPKRIQHVNRMNLFSSRRPKTY 175
I++ + +S RRP +KQ R+RFP LP +Q R F+S+RP TY
Sbjct: 133 IRISEISSSLVRRPHIKQLLKRRLRFPALHLPT-LQKEYRKK-FASKRPSTY 182
>UNIPROTKB|F1M6F8 [details] [associations]
symbol:F1M6F8 "60S ribosomal protein L18a" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10052 IPI:IPI00950365
Ensembl:ENSRNOT00000001255 Uniprot:F1M6F8
Length = 165
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 88/169 (52%), Positives = 110/169 (65%)
Query: 6 LLKEYEVIGRKLPTEKEKITPLYKMRIFAPDDIVAKSRFWYFLRQLKKFKKSTGEIVSLK 65
+L+EY V+GR LP K T + + + V KSRFWY + QLK ++GEIV
Sbjct: 6 MLQEYNVVGRCLPHPKNA-THCHCTK---SNHAVVKSRFWYSVSQLK----TSGEIVYHG 57
Query: 66 LISEKSPTKIKNFGIWLRYDSRSGTHNMYREYRDLSVSGAVTQCYRDMGARHRARAHSIQ 125
+ EKSP ++KNFGIWL YDSRSGTHNM REY DL +G VTQCYRDMGA H A HSIQ
Sbjct: 58 QVFEKSPLRVKNFGIWLCYDSRSGTHNMDREYWDLIATGVVTQCYRDMGAGHGA-THSIQ 116
Query: 126 IIKLEVVKASACRRPLVKQFHDSRIRFPLPKRIQHVNRMNLFSSRRPKT 174
+K+E + RRP VKQFHDSRI+FPLP + + F+++ P T
Sbjct: 117 NVKVEEIADGKHRRP-VKQFHDSRIKFPLPHHMLRQQKP-CFTAKSPNT 163
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.137 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 177 177 0.00084 109 3 11 22 0.49 31
31 0.50 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 579 (62 KB)
Total size of DFA: 151 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.02u 0.10s 18.12t Elapsed: 00:00:01
Total cpu time: 18.02u 0.10s 18.12t Elapsed: 00:00:01
Start: Thu Aug 15 11:07:47 2013 End: Thu Aug 15 11:07:48 2013