BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10337
(87 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VSA3|ACADM_DROME Probable medium-chain specific acyl-CoA dehydrogenase,
mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1
SV=1
Length = 419
Score = 83.2 bits (204), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/45 (80%), Positives = 42/45 (93%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84
+ +FGGNGFNS+YPVEKLMRDAKIYQIYEGT+QIQRLI+SR + E
Sbjct: 369 VQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNMYE 413
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/37 (89%), Positives = 37/37 (100%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+FGGNGFNS+YPVEKLMRDAKIYQIYEGT+QIQRLI+
Sbjct: 371 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLII 407
>sp|A8XNF0|ACAD1_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 1,
mitochondrial OS=Caenorhabditis briggsae GN=CBG15946
PE=3 SV=1
Length = 417
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/44 (75%), Positives = 42/44 (95%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 83
+ +FGGNGFNS+YPVEKLMRDAKIYQIYEGT+QIQR+++SR ++
Sbjct: 363 VQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVISRMLL 406
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/37 (83%), Positives = 37/37 (100%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+FGGNGFNS+YPVEKLMRDAKIYQIYEGT+QIQR+++
Sbjct: 365 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVI 401
>sp|A8WP91|ACAD2_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 2,
mitochondrial OS=Caenorhabditis briggsae GN=CBG00953
PE=3 SV=2
Length = 408
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 46/49 (93%)
Query: 35 QIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 83
+I+RL+++F NGFNS+YPVEKLMRDAKIYQIYEGT+QIQR+++SR ++
Sbjct: 349 RIRRLLMLFRCNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVISRMLL 397
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 35/37 (94%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+F NGFNS+YPVEKLMRDAKIYQIYEGT+QIQR+++
Sbjct: 356 LFRCNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVI 392
>sp|Q22347|ACADM_CAEEL Probable medium-chain specific acyl-CoA dehydrogenase 10,
mitochondrial OS=Caenorhabditis elegans GN=acdh-10 PE=2
SV=1
Length = 417
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 45/60 (75%)
Query: 24 AKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 83
AK + + +FGGNGFNS+YPVEKLMRDAKIYQIYEGT+QIQR+++SR ++
Sbjct: 347 AKCFAADTANQAATNAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVISRMLL 406
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 37/37 (100%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+FGGNGFNS+YPVEKLMRDAKIYQIYEGT+QIQR+++
Sbjct: 365 IFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVI 401
>sp|Q3SZB4|ACADM_BOVIN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADM PE=2 SV=1
Length = 421
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 42/46 (91%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85
+ +FGGNGFN++YPVEKLMRDAKIYQIYEGTAQIQRLI++R I R
Sbjct: 373 VQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIGR 418
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/38 (86%), Positives = 37/38 (97%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVV 42
+FGGNGFN++YPVEKLMRDAKIYQIYEGTAQIQRLI+
Sbjct: 375 IFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIA 412
>sp|P41367|ACADM_PIG Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADM PE=1 SV=3
Length = 421
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 42/46 (91%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85
+ VFGGNGFN++YPVEKLMRDAKIYQIYEGTAQIQR+I++R I R
Sbjct: 373 VQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRIIIAREHIGR 418
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/38 (86%), Positives = 37/38 (97%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVV 42
VFGGNGFN++YPVEKLMRDAKIYQIYEGTAQIQR+I+
Sbjct: 375 VFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRIIIA 412
>sp|P45952|ACADM_MOUSE Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acadm PE=1 SV=1
Length = 421
Score = 79.7 bits (195), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85
+ +FGG GFN++YPVEKLMRDAKIYQIYEGTAQIQRLI++R IE+
Sbjct: 373 VQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIEK 418
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+FGG GFN++YPVEKLMRDAKIYQIYEGTAQIQRLI+
Sbjct: 375 IFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLII 411
>sp|P08503|ACADM_RAT Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadm PE=1 SV=1
Length = 421
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85
+ +FGG GFN++YPVEKLMRDAKIYQIYEGTAQIQRLI++R IE+
Sbjct: 373 VQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIEK 418
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 36/38 (94%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVV 42
+FGG GFN++YPVEKLMRDAKIYQIYEGTAQIQRLI+
Sbjct: 375 IFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIA 412
>sp|Q8HXY8|ACADM_MACFA Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADM PE=2 SV=1
Length = 421
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 40/41 (97%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSR 80
+ +FGGNGFN++YPVEKLMRDAKIYQIYEGT+QIQRLI++R
Sbjct: 373 VQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIIAR 413
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 37/38 (97%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVV 42
+FGGNGFN++YPVEKLMRDAKIYQIYEGT+QIQRLI+
Sbjct: 375 IFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIIA 412
>sp|P11310|ACADM_HUMAN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADM PE=1 SV=1
Length = 421
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 42/46 (91%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85
+ + GGNGFN++YPVEKLMRDAKIYQIYEGT+QIQRLIV+R I++
Sbjct: 373 VQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDK 418
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 36/38 (94%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVV 42
+ GGNGFN++YPVEKLMRDAKIYQIYEGT+QIQRLIV
Sbjct: 375 ILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVA 412
>sp|A5A6I0|ACADM_PANTR Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan
troglodytes GN=ACADM PE=2 SV=1
Length = 421
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 42/46 (91%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85
+ + GGNGFN++YPVEKLMRDAKIYQIYEGT+QIQRLIV+R I++
Sbjct: 373 VQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDK 418
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 36/38 (94%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVV 42
+ GGNGFN++YPVEKLMRDAKIYQIYEGT+QIQRLIV
Sbjct: 375 ILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVA 412
>sp|P46703|ACDP_MYCLE Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae
(strain TN) GN=fadE25 PE=3 SV=1
Length = 389
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 38/44 (86%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 83
+ +FGG G+ SD+PVE+ MRDAKI QIYEGT QIQR+++SRA++
Sbjct: 345 VQLFGGAGYTSDFPVERFMRDAKITQIYEGTNQIQRVVMSRALL 388
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+FGG G+ SD+PVE+ MRDAKI QIYEGT QIQR+++
Sbjct: 347 LFGGAGYTSDFPVERFMRDAKITQIYEGTNQIQRVVM 383
>sp|P63427|ACDP_MYCTU Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium
tuberculosis GN=fadE25 PE=3 SV=1
Length = 389
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 38/44 (86%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 83
+ +FGG G+ +D+PVE+ MRDAKI QIYEGT QIQR+++SRA++
Sbjct: 345 VQLFGGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSRALL 388
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 32/37 (86%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+FGG G+ +D+PVE+ MRDAKI QIYEGT QIQR+++
Sbjct: 347 LFGGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVM 383
>sp|P63428|ACDP_MYCBO Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadE25 PE=3 SV=1
Length = 389
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 38/44 (86%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 83
+ +FGG G+ +D+PVE+ MRDAKI QIYEGT QIQR+++SRA++
Sbjct: 345 VQLFGGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSRALL 388
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 32/37 (86%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+FGG G+ +D+PVE+ MRDAKI QIYEGT QIQR+++
Sbjct: 347 LFGGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVM 383
>sp|P45867|ACDA_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA
PE=2 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84
+ +FGG G+ DYPVE+ MRDAKI QIYEGT +IQRL++SR + +
Sbjct: 335 VQIFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLAD 379
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+FGG G+ DYPVE+ MRDAKI QIYEGT +IQRL++
Sbjct: 337 IFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVI 373
>sp|P52042|ACDS_CLOAB Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=bcd PE=3 SV=1
Length = 379
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 37/45 (82%)
Query: 38 RLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAI 82
+ + +FGG G+ DYPVE++MRDAKI +IYEGT+++Q+L++S I
Sbjct: 333 KAVQLFGGYGYTKDYPVERMMRDAKITEIYEGTSEVQKLVISGKI 377
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 33/37 (89%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+FGG G+ DYPVE++MRDAKI +IYEGT+++Q+L++
Sbjct: 337 LFGGYGYTKDYPVERMMRDAKITEIYEGTSEVQKLVI 373
>sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC
PE=2 SV=3
Length = 379
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 37/44 (84%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 83
+ ++GG G+ DYPVE+L+RDAK+ QIYEGT +IQRLI+S+ ++
Sbjct: 333 VQIYGGYGYMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYLL 376
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 32/37 (86%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
++GG G+ DYPVE+L+RDAK+ QIYEGT +IQRLI+
Sbjct: 335 IYGGYGYMKDYPVERLLRDAKVTQIYEGTNEIQRLII 371
>sp|O34421|ACDC_BACSU Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain
168) GN=yngJ PE=3 SV=1
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 45/69 (65%)
Query: 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 75
P K AK++ T + I + GG+G+ +Y VE+++RDAK+ +I EGT++IQR
Sbjct: 312 PFTKEAAYAKLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLMEIGEGTSEIQR 371
Query: 76 LIVSRAIIE 84
L+++R +++
Sbjct: 372 LVIARQLLK 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 31/37 (83%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+ GG+G+ +Y VE+++RDAK+ +I EGT++IQRL++
Sbjct: 338 IHGGSGYMKEYGVERMLRDAKLMEIGEGTSEIQRLVI 374
>sp|Q5RBD5|IVD_PONAB Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD
PE=2 SV=1
Length = 423
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 37/47 (78%), Gaps = 3/47 (6%)
Query: 6 FGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDY 52
FGGNG+ +D+P+ + +RDAK+Y+I GT++++RL++ G FN+D+
Sbjct: 379 FGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVI---GRAFNADF 422
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 34/42 (80%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRA 81
I FGGNG+ +D+P+ + +RDAK+Y+I GT++++RL++ RA
Sbjct: 376 IQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRA 417
>sp|P26440|IVD_HUMAN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD
PE=1 SV=1
Length = 423
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 37/47 (78%), Gaps = 3/47 (6%)
Query: 6 FGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDY 52
FGGNG+ +D+P+ + +RDAK+Y+I GT++++RL++ G FN+D+
Sbjct: 379 FGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVI---GRAFNADF 422
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 34/42 (80%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRA 81
I FGGNG+ +D+P+ + +RDAK+Y+I GT++++RL++ RA
Sbjct: 376 IQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRA 417
>sp|Q07417|ACADS_MOUSE Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acads PE=2 SV=2
Length = 412
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 75
P K AK+ TA + I + GG G+ ++ P E+ RDA+I +IYEGT++IQR
Sbjct: 340 PFTKESAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERYYRDARITEIYEGTSEIQR 399
Query: 76 LIVS 79
L+++
Sbjct: 400 LVIA 403
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+ GG G+ ++ P E+ RDA+I +IYEGT++IQRL++
Sbjct: 366 ILGGMGYVTEMPAERYYRDARITEIYEGTSEIQRLVI 402
>sp|P15651|ACADS_RAT Short-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acads PE=1 SV=2
Length = 412
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 75
P K AK+ TA + I + GG G+ ++ P E+ RDA+I +IYEGT++IQR
Sbjct: 340 PFTKESAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERYYRDARITEIYEGTSEIQR 399
Query: 76 LIVS 79
L+++
Sbjct: 400 LVIA 403
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+ GG G+ ++ P E+ RDA+I +IYEGT++IQRL++
Sbjct: 366 ILGGMGYVTEMPAERYYRDARITEIYEGTSEIQRLVI 402
>sp|P79273|ACADS_PIG Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADS PE=2 SV=1
Length = 413
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 12 NSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA 71
N P K AK+ TA + I + GG G+ ++ P E+ RDA+I +IYEGT+
Sbjct: 337 NKKNPFIKEPAMAKLAASEAATAITHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTS 396
Query: 72 QIQRLIVS 79
+IQRL+++
Sbjct: 397 EIQRLVIA 404
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+ GG G+ ++ P E+ RDA+I +IYEGT++IQRL++
Sbjct: 367 ILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVI 403
>sp|Q3SZI8|IVD_BOVIN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD
PE=2 SV=1
Length = 426
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 36/47 (76%), Gaps = 3/47 (6%)
Query: 6 FGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDY 52
GGNG+ +D+P+ + +RDAK+Y+I GT++++RL++ G FN+D+
Sbjct: 382 LGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVI---GRAFNADF 425
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 33/42 (78%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRA 81
I GGNG+ +D+P+ + +RDAK+Y+I GT++++RL++ RA
Sbjct: 379 IQCLGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRA 420
>sp|Q9JHI5|IVD_MOUSE Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd
PE=1 SV=1
Length = 424
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDY 52
GGNG+ +D+P+ + +RDAK+Y+I GT++++RL++ G FN+D+
Sbjct: 379 CLGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVI---GRAFNADF 423
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 33/42 (78%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRA 81
I GGNG+ +D+P+ + +RDAK+Y+I GT++++RL++ RA
Sbjct: 377 IQCLGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRA 418
>sp|Q06319|ACDS_MEGEL Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera
elsdenii PE=1 SV=1
Length = 383
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 83
+ +FGG G++ +YPV + MRDAKI QIYEGT ++Q ++ A++
Sbjct: 339 VQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALL 382
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGG 45
+FGG G++ +YPV + MRDAKI QIYEGT ++Q ++V GG
Sbjct: 341 IFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQ--LMVTGG 379
>sp|Q3ZBF6|ACADS_BOVIN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADS PE=2 SV=1
Length = 412
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 75
P K AK+ TA + + + GG G+ + P E+ RDA+I +IYEGT++IQR
Sbjct: 340 PFTKEAAMAKLAASEAATAITHQAMQILGGMGYVKEMPAERHYRDARITEIYEGTSEIQR 399
Query: 76 LIVS 79
L+V+
Sbjct: 400 LVVA 403
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+ GG G+ + P E+ RDA+I +IYEGT++IQRL+V
Sbjct: 366 ILGGMGYVKEMPAERHYRDARITEIYEGTSEIQRLVV 402
>sp|Q5RAS0|ACADS_PONAB Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo
abelii GN=ACADS PE=2 SV=1
Length = 412
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 24 AKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVS 79
AK+ TA + I + GG G+ ++ P E+ RDA+I +IYEGT++IQRL+++
Sbjct: 348 AKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIA 403
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+ GG G+ ++ P E+ RDA+I +IYEGT++IQRL++
Sbjct: 366 ILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVI 402
>sp|P16219|ACADS_HUMAN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADS PE=1 SV=1
Length = 412
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 24 AKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVS 79
AK+ TA + I + GG G+ ++ P E+ RDA+I +IYEGT++IQRL+++
Sbjct: 348 AKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIA 403
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+ GG G+ ++ P E+ RDA+I +IYEGT++IQRL++
Sbjct: 366 ILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVI 402
>sp|Q9FS88|IVD1_SOLTU Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum
GN=IVD1 PE=2 SV=1
Length = 412
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85
I GGNG+ ++YP +L+RDAK+Y+I GT++I+RL++ R + +
Sbjct: 366 IQCLGGNGYINEYPTGRLLRDAKMYEIAAGTSEIRRLVIGRELFKH 411
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 30/37 (81%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
GGNG+ ++YP +L+RDAK+Y+I GT++I+RL++
Sbjct: 368 CLGGNGYINEYPTGRLLRDAKMYEIAAGTSEIRRLVI 404
>sp|P12007|IVD_RAT Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ivd PE=1 SV=2
Length = 424
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDY 52
GGNG+ +D+P+ + +RDAK+Y+I GT++++RL++ G FN+D+
Sbjct: 379 CLGGNGYINDFPMGRFLRDAKLYEIGGGTSEVRRLVI---GRAFNADF 423
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 33/42 (78%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRA 81
I GGNG+ +D+P+ + +RDAK+Y+I GT++++RL++ RA
Sbjct: 377 IQCLGGNGYINDFPMGRFLRDAKLYEIGGGTSEVRRLVIGRA 418
>sp|Q9D7B6|ACAD8_MOUSE Isobutyryl-CoA dehydrogenase, mitochondrial OS=Mus musculus
GN=Acad8 PE=2 SV=2
Length = 413
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 41/61 (67%)
Query: 24 AKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 83
AK++ E A + + + GG G+ DY V++ MRD++++QI EG+ ++ R+++SR ++
Sbjct: 352 AKLFATEECFAICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILEGSNEVMRMLISRNLL 411
Query: 84 E 84
+
Sbjct: 412 Q 412
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 27/35 (77%)
Query: 7 GGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
GG G+ DY V++ MRD++++QI EG+ ++ R+++
Sbjct: 372 GGYGYLKDYAVQQYMRDSRVHQILEGSNEVMRMLI 406
>sp|Q54IM8|ACAD8_DICDI Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=acad8 PE=3 SV=1
Length = 416
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 42 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAI 82
+FGG G+ DYPVE+ +RD ++++I EG+ + RLI+SR +
Sbjct: 371 LFGGYGYLKDYPVERYLRDLRVHRILEGSDAVMRLIISREL 411
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
+FGG G+ DYPVE+ +RD ++++I EG+ + RLI+
Sbjct: 371 LFGGYGYLKDYPVERYLRDLRVHRILEGSDAVMRLII 407
>sp|Q9FS87|IVD2_SOLTU Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment) OS=Solanum
tuberosum GN=IVD2 PE=1 SV=1
Length = 401
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84
I GGNG+ ++YP + +RDAK+Y+I GT++I+R+I+ R + +
Sbjct: 355 IQCLGGNGYVNEYPTGRFLRDAKLYEIGAGTSEIRRMIIGRELFK 399
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
GGNG+ ++YP + +RDAK+Y+I GT++I+R+I+
Sbjct: 357 CLGGNGYVNEYPTGRFLRDAKLYEIGAGTSEIRRMII 393
>sp|P70584|ACDSB_RAT Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadsb PE=1 SV=1
Length = 432
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 34/67 (50%)
Query: 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 75
P K AK Y + I GG G+ DYPVEK RDAKI IYEGT+ IQ
Sbjct: 362 PFIKEASMAKYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIGTIYEGTSNIQL 421
Query: 76 LIVSRAI 82
+++ I
Sbjct: 422 NTIAKHI 428
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 7 GGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQ 37
GG G+ DYPVEK RDAKI IYEGT+ IQ
Sbjct: 390 GGVGYTKDYPVEKFFRDAKIGTIYEGTSNIQ 420
>sp|Q9UKU7|ACAD8_HUMAN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens
GN=ACAD8 PE=1 SV=1
Length = 415
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 42/61 (68%)
Query: 24 AKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 83
AK++ E A + + + GG G+ DY V++ +RD++++QI EG+ ++ R+++SR+++
Sbjct: 354 AKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLL 413
Query: 84 E 84
+
Sbjct: 414 Q 414
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 27/35 (77%)
Query: 7 GGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
GG G+ DY V++ +RD++++QI EG+ ++ R+++
Sbjct: 374 GGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILI 408
>sp|Q8JZN5|ACAD9_MOUSE Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus
musculus GN=Acad9 PE=2 SV=2
Length = 625
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 1 MSHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRD 60
++ G+ GF D +E M K++ + + + GG+G+ DYP E+++RD
Sbjct: 366 LTSGMLDQPGF-PDCSIEAAM--VKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRD 422
Query: 61 AKIYQIYEGTAQIQRLIVS 79
A+I I+EGT +I RL ++
Sbjct: 423 ARILLIFEGTNEILRLFIA 441
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGG 45
+ GG+G+ DYP E+++RDA+I I+EGT +I RL + G
Sbjct: 404 ILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIALTG 444
>sp|Q54RR5|ACDSB_DICDI Probable short/branched chain specific acyl-CoA dehydrogenase
OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1
Length = 413
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 39 LIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84
I + GG GF ++P EK RD+K+ QIYEGT+ IQ +++ I++
Sbjct: 364 CISMLGGVGFTKEFPAEKFFRDSKVGQIYEGTSNIQLQTIAKEIVK 409
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQ 37
+ GG GF ++P EK RD+K+ QIYEGT+ IQ
Sbjct: 367 MLGGVGFTKEFPAEKFFRDSKVGQIYEGTSNIQ 399
>sp|Q0NXR6|ACAD8_BOVIN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACAD8
PE=2 SV=1
Length = 416
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 42/61 (68%)
Query: 24 AKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 83
AK++ E A + + + GG G+ DY V++ +RD++++QI EG+ ++ R+++SR+++
Sbjct: 355 AKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRMLISRSLL 414
Query: 84 E 84
+
Sbjct: 415 Q 415
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 27/35 (77%)
Query: 7 GGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
GG G+ DY V++ +RD++++QI EG+ ++ R+++
Sbjct: 375 GGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRMLI 409
>sp|Q9DBL1|ACDSB_MOUSE Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadsb PE=1 SV=1
Length = 432
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 33/67 (49%)
Query: 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 75
P K AK Y + I GG G+ DYPVEK RDAKI IYEG + IQ
Sbjct: 362 PFIKEASMAKYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIGTIYEGASNIQL 421
Query: 76 LIVSRAI 82
+++ I
Sbjct: 422 NTIAKHI 428
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 7 GGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQ 37
GG G+ DYPVEK RDAKI IYEG + IQ
Sbjct: 390 GGVGYTKDYPVEKFFRDAKIGTIYEGASNIQ 420
>sp|Q5EAD4|ACDSB_BOVIN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADSB PE=2 SV=1
Length = 432
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 38 RLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAI 82
+ I GG G+ YPVEK RDAKI IYEGT+ IQ +++ I
Sbjct: 384 KCIEWMGGVGYTKSYPVEKYFRDAKIGTIYEGTSNIQLNTIAKCI 428
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 22/32 (68%)
Query: 6 FGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQ 37
GG G+ YPVEK RDAKI IYEGT+ IQ
Sbjct: 389 MGGVGYTKSYPVEKYFRDAKIGTIYEGTSNIQ 420
>sp|Q5RF40|ACDSB_PONAB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Pongo abelii GN=ACADSB PE=2 SV=1
Length = 432
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 33/67 (49%)
Query: 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 75
P K AK Y + I GG G+ DYPVEK RDAKI IYEG + IQ
Sbjct: 362 PFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQL 421
Query: 76 LIVSRAI 82
+++ I
Sbjct: 422 NTIAKHI 428
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 7 GGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQ 37
GG G+ DYPVEK RDAKI IYEG + IQ
Sbjct: 390 GGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 420
>sp|P45954|ACDSB_HUMAN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADSB PE=1 SV=1
Length = 432
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 33/67 (49%)
Query: 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 75
P K AK Y + I GG G+ DYPVEK RDAKI IYEG + IQ
Sbjct: 362 PFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQL 421
Query: 76 LIVSRAI 82
+++ I
Sbjct: 422 NTIAKHI 428
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 7 GGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQ 37
GG G+ DYPVEK RDAKI IYEG + IQ
Sbjct: 390 GGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 420
>sp|Q9SWG0|IVD_ARATH Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana
GN=IVD PE=1 SV=2
Length = 409
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 33/45 (73%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84
I GGNG+ ++Y +L+RDAK+Y+I GT++I+R+++ R + +
Sbjct: 363 IQCLGGNGYINEYATGRLLRDAKLYEIGAGTSEIRRIVIGRELFK 407
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 29/37 (78%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV 41
GGNG+ ++Y +L+RDAK+Y+I GT++I+R+++
Sbjct: 365 CLGGNGYINEYATGRLLRDAKLYEIGAGTSEIRRIVI 401
>sp|Q9H845|ACAD9_HUMAN Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo
sapiens GN=ACAD9 PE=1 SV=1
Length = 621
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGG 45
+ GG G+ DYP E+++RD +I I+EGT +I R+ + G
Sbjct: 400 ILGGLGYTRDYPYERILRDTRILLIFEGTNEILRMYIALTG 440
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 1 MSHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRD 60
++ G+ GF D +E M K++ + + + GG G+ DYP E+++RD
Sbjct: 362 LTAGMLDQPGF-PDCSIEAAM--VKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRD 418
Query: 61 AKIYQIYEGTAQIQRLIVS 79
+I I+EGT +I R+ ++
Sbjct: 419 TRILLIFEGTNEILRMYIA 437
>sp|O32176|FADE_BACSU Probable acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168)
GN=fadE PE=2 SV=1
Length = 594
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 40 IVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85
+ + GG GF +Y VE+ RD++I +I+EGT +I RLIV +++
Sbjct: 377 VQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVPSTFLKK 422
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIV--VFGGNGFNSDYPV 54
+ GG GF +Y VE+ RD++I +I+EGT +I RLIV F + P+
Sbjct: 379 IHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVPSTFLKKALKGELPL 430
>sp|Q8HXY7|ACADV_MACFA Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADVL PE=2 SV=1
Length = 655
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 12 NSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA 71
++D+ +E + +KI+ I + GG GF + VE+++RD +I++I+EGT
Sbjct: 408 STDFQIEAAI--SKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTN 465
Query: 72 QIQRLIVS 79
I RL V+
Sbjct: 466 DILRLFVA 473
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGG 45
+ GG GF + VE+++RD +I++I+EGT I RL V G
Sbjct: 436 IMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQG 476
>sp|P49748|ACADV_HUMAN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADVL PE=1 SV=1
Length = 655
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 12 NSDYPVEKLMRDAKIYQIYEGTAQ---IQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYE 68
N D +A I +I+ A I + GG GF + VE+++RD +I++I+E
Sbjct: 403 NMDQGATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFE 462
Query: 69 GTAQIQRLIVS 79
GT I RL V+
Sbjct: 463 GTNDILRLFVA 473
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGG 45
+ GG GF + VE+++RD +I++I+EGT I RL V G
Sbjct: 436 IMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQG 476
>sp|P45953|ACADV_RAT Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadvl PE=1 SV=1
Length = 655
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 12 NSDYPVEKLMRDAKIYQIYEGTAQ---IQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYE 68
N D + +A I +I+ A I + GG GF + VE+++RD +I++I+E
Sbjct: 403 NMDQGFKDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDIRIFRIFE 462
Query: 69 GTAQIQRLIVS 79
GT I RL V+
Sbjct: 463 GTNDILRLFVA 473
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGG 45
+ GG GF + VE+++RD +I++I+EGT I RL V G
Sbjct: 436 IMGGMGFMKEPGVERVLRDIRIFRIFEGTNDILRLFVALQG 476
>sp|P48818|ACADV_BOVIN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADVL PE=2 SV=3
Length = 655
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 12 NSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA 71
++D+ +E + +KI+ I + GG GF + VE+++RD +I++I+EGT
Sbjct: 408 STDFQIEAAI--SKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTN 465
Query: 72 QIQRLIVS 79
I RL V+
Sbjct: 466 DILRLFVA 473
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 5 VFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGG 45
+ GG GF + VE+++RD +I++I+EGT I RL V G
Sbjct: 436 IMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQG 476
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,123,650
Number of Sequences: 539616
Number of extensions: 1171653
Number of successful extensions: 2656
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2461
Number of HSP's gapped (non-prelim): 206
length of query: 87
length of database: 191,569,459
effective HSP length: 57
effective length of query: 30
effective length of database: 160,811,347
effective search space: 4824340410
effective search space used: 4824340410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)