Query psy10337
Match_columns 87
No_of_seqs 178 out of 1100
Neff 10.2
Searched_HMMs 29240
Date Fri Aug 16 15:24:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10337.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10337hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jif_A Short/branched chain sp 99.7 5.8E-17 2E-21 102.7 7.5 72 15-86 333-404 (404)
2 1egd_A Medium chain acyl-COA d 99.7 1.4E-16 4.7E-21 100.7 7.4 73 14-86 322-394 (396)
3 4hr3_A Putative acyl-COA dehyd 99.7 1.6E-16 5.3E-21 100.9 7.5 72 16-87 342-413 (415)
4 1ivh_A Isovaleryl-COA dehydrog 99.7 1.7E-16 5.7E-21 100.2 6.8 72 15-86 322-393 (394)
5 3owa_A Acyl-COA dehydrogenase; 99.7 2.4E-16 8.1E-21 104.1 7.7 69 18-86 358-426 (597)
6 3pfd_A Acyl-COA dehydrogenase; 99.7 1.3E-16 4.4E-21 100.7 5.7 68 17-84 326-393 (393)
7 2dvl_A Acyl-COA dehydrogenase; 99.6 2.5E-16 8.6E-21 98.7 6.5 71 14-84 302-372 (372)
8 2vig_A Short-chain specific ac 99.6 3.9E-16 1.3E-20 98.5 7.3 71 16-86 312-382 (391)
9 1rx0_A Acyl-COA dehydrogenase 99.6 4.1E-16 1.4E-20 98.5 7.4 70 16-85 324-393 (393)
10 3swo_A Glutaryl-COA dehydrogen 99.6 4.8E-16 1.6E-20 98.3 7.4 73 13-85 322-394 (399)
11 3nf4_A Acyl-COA dehydrogenase; 99.6 1.9E-16 6.5E-21 99.7 5.5 72 13-84 316-387 (387)
12 2d29_A Acyl-COA dehydrogenase; 99.6 5.3E-16 1.8E-20 97.7 7.4 70 16-85 317-386 (387)
13 3sf6_A Glutaryl-COA dehydrogen 99.6 3.9E-16 1.3E-20 98.8 6.8 72 14-85 328-399 (403)
14 1ukw_A Acyl-COA dehydrogenase; 99.6 3.6E-16 1.2E-20 98.2 6.5 69 16-84 310-378 (379)
15 1r2j_A Protein FKBI; polyketid 99.6 3.2E-16 1.1E-20 98.2 5.8 70 15-84 294-363 (366)
16 2wbi_A Acyl-COA dehydrogenase 99.6 1.2E-15 4E-20 97.3 7.7 71 16-86 350-420 (428)
17 3ii9_A Glutaryl-COA dehydrogen 99.6 4.1E-16 1.4E-20 98.5 5.4 71 14-84 321-391 (396)
18 1buc_A Butyryl-COA dehydrogena 99.6 7E-16 2.4E-20 97.0 6.2 69 16-84 315-383 (383)
19 2ix5_A Acyl-coenzyme A oxidase 99.6 9.4E-16 3.2E-20 98.1 6.7 70 16-85 356-425 (436)
20 3r7k_A Probable acyl COA dehyd 99.6 1E-15 3.5E-20 96.9 6.6 70 13-82 332-401 (403)
21 2eba_A Putative glutaryl-COA d 99.6 1.4E-15 4.7E-20 95.8 6.8 70 15-84 312-381 (385)
22 1siq_A GCD, glutaryl-COA dehyd 99.6 2.4E-15 8.1E-20 94.9 6.3 69 16-84 316-384 (392)
23 3p4t_A Putative acyl-COA dehyd 99.6 3.8E-15 1.3E-19 94.3 6.6 65 18-82 335-399 (403)
24 2pg0_A Acyl-COA dehydrogenase; 99.6 3.7E-15 1.3E-19 93.8 6.4 68 15-82 316-383 (385)
25 3mpi_A Glutaryl-COA dehydrogen 99.6 5.5E-15 1.9E-19 93.3 7.1 68 15-82 314-382 (397)
26 3djl_A Protein AIDB; alpha hel 99.6 1.5E-14 5.1E-19 94.7 9.1 68 18-85 375-442 (541)
27 2z1q_A Acyl-COA dehydrogenase; 99.6 1.8E-15 6.2E-20 99.6 4.7 68 18-85 348-415 (577)
28 3mxl_A Nitrososynthase; flavin 99.6 7.7E-15 2.6E-19 92.4 7.1 67 18-84 326-393 (395)
29 2rfq_A 3-HSA hydroxylase, oxyg 99.5 1.8E-14 6.1E-19 90.8 7.7 68 18-85 319-387 (394)
30 3mkh_A Nitroalkane oxidase; ox 99.5 1E-14 3.5E-19 93.1 6.5 67 19-85 350-417 (438)
31 2jbr_A P-hydroxyphenylacetate 99.5 2.2E-14 7.6E-19 91.2 5.6 68 18-85 347-415 (422)
32 1w07_A Acyl-COA oxidase; oxido 99.5 6.1E-14 2.1E-18 93.6 7.6 70 17-86 373-442 (659)
33 2or0_A Hydroxylase; APC7385, r 99.5 2.6E-14 8.9E-19 90.7 5.6 68 18-85 334-402 (414)
34 2uxw_A VERY-long-chain specifi 99.5 4.4E-14 1.5E-18 93.5 6.7 66 17-82 363-428 (607)
35 2ddh_A Acyl-COA oxidase; beta 99.5 9.7E-14 3.3E-18 92.7 6.4 70 17-86 370-439 (661)
36 3m9v_A FAD-dependent oxidoredu 99.5 1.8E-13 6E-18 87.4 7.1 68 18-85 337-405 (439)
37 2c12_A Nitroalkane oxidase; ox 99.4 2.3E-13 7.8E-18 87.0 5.1 66 18-83 352-418 (439)
38 2yyk_A 4-hydroxyphenylacetate- 98.5 2.5E-07 8.5E-12 60.1 5.1 64 16-82 353-422 (481)
39 1u8v_A Gamma-aminobutyrate met 98.3 3.3E-07 1.1E-11 59.7 2.6 43 17-61 362-404 (490)
40 4g5e_A 2,4,6-trichlorophenol 4 96.6 0.0025 8.4E-08 42.0 4.2 35 16-50 358-392 (517)
41 3hwc_A Chlorophenol-4-monooxyg 96.3 0.0051 1.7E-07 40.5 4.0 36 16-51 357-392 (515)
42 3owa_A Acyl-COA dehydrogenase; 95.3 0.0064 2.2E-07 40.7 1.5 38 2-39 379-416 (597)
43 3nf4_A Acyl-COA dehydrogenase; 95.3 0.0057 1.9E-07 38.4 1.2 38 2-39 342-379 (387)
44 3pfd_A Acyl-COA dehydrogenase; 95.2 0.0067 2.3E-07 38.2 1.4 38 2-39 348-385 (393)
45 2jif_A Short/branched chain sp 95.2 0.0072 2.5E-07 38.3 1.5 38 2-39 357-394 (404)
46 2z1q_A Acyl-COA dehydrogenase; 95.2 0.0083 2.8E-07 39.9 1.8 39 2-40 369-407 (577)
47 1ukw_A Acyl-COA dehydrogenase; 95.2 0.0073 2.5E-07 37.9 1.4 38 2-39 333-370 (379)
48 2pg0_A Acyl-COA dehydrogenase; 95.2 0.01 3.5E-07 37.3 2.1 38 2-39 340-377 (385)
49 3r7k_A Probable acyl COA dehyd 95.1 0.007 2.4E-07 38.3 1.3 38 2-39 358-395 (403)
50 1r2j_A Protein FKBI; polyketid 95.1 0.0085 2.9E-07 37.4 1.5 37 2-38 318-354 (366)
51 3swo_A Glutaryl-COA dehydrogen 95.0 0.0093 3.2E-07 37.7 1.6 37 2-38 348-384 (399)
52 1rx0_A Acyl-COA dehydrogenase 95.0 0.0078 2.7E-07 38.0 1.3 37 2-38 347-383 (393)
53 2dvl_A Acyl-COA dehydrogenase; 95.0 0.0079 2.7E-07 37.6 1.2 38 2-39 327-364 (372)
54 4hr3_A Putative acyl-COA dehyd 94.9 0.0093 3.2E-07 37.8 1.4 37 2-38 365-401 (415)
55 2d29_A Acyl-COA dehydrogenase; 94.9 0.0099 3.4E-07 37.4 1.5 37 2-38 340-376 (387)
56 3mpi_A Glutaryl-COA dehydrogen 94.9 0.011 3.7E-07 37.3 1.7 39 2-40 338-376 (397)
57 1egd_A Medium chain acyl-COA d 94.8 0.011 3.7E-07 37.3 1.6 37 2-38 347-383 (396)
58 1ivh_A Isovaleryl-COA dehydrog 94.8 0.0095 3.3E-07 37.5 1.3 38 2-39 346-383 (394)
59 3sf6_A Glutaryl-COA dehydrogen 94.8 0.011 3.6E-07 37.5 1.4 37 2-38 353-389 (403)
60 2wbi_A Acyl-COA dehydrogenase 94.7 0.013 4.3E-07 37.4 1.7 37 2-38 373-409 (428)
61 1buc_A Butyryl-COA dehydrogena 94.7 0.012 4.1E-07 36.9 1.5 37 2-38 338-374 (383)
62 2vig_A Short-chain specific ac 94.7 0.012 4.1E-07 37.1 1.5 37 2-38 335-371 (391)
63 3mxl_A Nitrososynthase; flavin 94.6 0.012 4.2E-07 36.9 1.5 37 2-38 347-384 (395)
64 3p4t_A Putative acyl-COA dehyd 94.6 0.012 3.9E-07 37.3 1.3 37 2-38 356-392 (403)
65 2eba_A Putative glutaryl-COA d 94.6 0.012 4E-07 37.0 1.2 37 2-38 336-372 (385)
66 3ii9_A Glutaryl-COA dehydrogen 94.5 0.0091 3.1E-07 37.7 0.7 37 2-38 346-382 (396)
67 2ix5_A Acyl-coenzyme A oxidase 94.5 0.012 3.9E-07 37.9 1.2 37 2-38 379-415 (436)
68 1siq_A GCD, glutaryl-COA dehyd 94.3 0.013 4.3E-07 36.9 1.0 37 2-38 339-375 (392)
69 3djl_A Protein AIDB; alpha hel 94.2 0.042 1.4E-06 36.4 3.4 38 2-39 396-433 (541)
70 2rfq_A 3-HSA hydroxylase, oxyg 94.2 0.024 8.1E-07 35.6 2.1 35 2-36 340-375 (394)
71 2uxw_A VERY-long-chain specifi 93.9 0.01 3.6E-07 39.7 0.1 36 2-37 385-420 (607)
72 2jbr_A P-hydroxyphenylacetate 93.7 0.03 1E-06 35.6 1.8 33 2-34 368-400 (422)
73 2or0_A Hydroxylase; APC7385, r 93.4 0.034 1.2E-06 35.2 1.7 31 2-32 355-385 (414)
74 3mkh_A Nitroalkane oxidase; ox 93.0 0.016 5.4E-07 37.0 -0.2 33 2-34 370-402 (438)
75 3m9v_A FAD-dependent oxidoredu 92.4 0.13 4.4E-06 32.8 3.4 33 2-34 358-391 (439)
76 1w07_A Acyl-COA oxidase; oxido 90.6 0.098 3.4E-06 35.4 1.5 37 2-38 395-431 (659)
77 2c12_A Nitroalkane oxidase; ox 90.4 0.054 1.9E-06 34.6 0.2 33 2-34 373-405 (439)
78 2ddh_A Acyl-COA oxidase; beta 86.1 0.13 4.6E-06 34.8 -0.1 37 2-38 392-428 (661)
No 1
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=99.69 E-value=5.8e-17 Score=102.72 Aligned_cols=72 Identities=38% Similarity=0.494 Sum_probs=67.6
Q ss_pred ChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHhc
Q psy10337 15 YPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIERN 86 (87)
Q Consensus 15 ~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~~ 86 (87)
.+....++++|+++++.+.++++.++|++||.||++++|++++|||++...+++|++|+|+++|++.++++|
T Consensus 333 ~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~~~~~ 404 (404)
T 2jif_A 333 KPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAEY 404 (404)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHhcCcceecCCCcHHHHHhhccceeecCCHHHHHHHHHHHHHhhcC
Confidence 344567899999999999999999999999999999999999999999999999999999999999998875
No 2
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=99.67 E-value=1.4e-16 Score=100.66 Aligned_cols=73 Identities=48% Similarity=0.694 Sum_probs=68.5
Q ss_pred CChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHhc
Q psy10337 14 DYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIERN 86 (87)
Q Consensus 14 ~~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~~ 86 (87)
+.+....++++|.++++.+.++++.++|++||.||+++++++++|||++...+++|++|+|+++|++.++++|
T Consensus 322 g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~~ 394 (396)
T 1egd_A 322 GRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKY 394 (396)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHTT
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCChHHHHHHHhhCeeecCCHHHHHHHHHHHHHHhhc
Confidence 3344567899999999999999999999999999999999999999999999999999999999999999876
No 3
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=99.67 E-value=1.6e-16 Score=100.87 Aligned_cols=72 Identities=18% Similarity=0.366 Sum_probs=68.7
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHhcC
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIERNS 87 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~~~ 87 (87)
+....++++|+++++.+.++++.++|++||.||++++|++++|||++..++++|++|+|+++|++.+|++|.
T Consensus 342 ~~~~~~~~aK~~a~e~a~~v~~~a~qi~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l~~~~ 413 (415)
T 4hr3_A 342 GALSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVVARIELAKYA 413 (415)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSSSSSHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCchHHHHHHHhhhheeecCcHHHHHHHHHHHHHHHhh
Confidence 456788999999999999999999999999999999999999999999999999999999999999999874
No 4
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.66 E-value=1.7e-16 Score=100.22 Aligned_cols=72 Identities=32% Similarity=0.519 Sum_probs=67.3
Q ss_pred ChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHhc
Q psy10337 15 YPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIERN 86 (87)
Q Consensus 15 ~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~~ 86 (87)
.+....++++|.++++.+.++++.++|++||.||++++|++++|||++..++++|++|+|+++|++.+++.|
T Consensus 322 ~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~ll~~~ 393 (394)
T 1ivh_A 322 HCTAKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNADF 393 (394)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSTHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHTC-
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCchHHHHHHhcccccccCChHHHHHHHHHHHHHhhc
Confidence 344667899999999999999999999999999999999999999999999999999999999999999876
No 5
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=99.66 E-value=2.4e-16 Score=104.12 Aligned_cols=69 Identities=28% Similarity=0.512 Sum_probs=66.0
Q ss_pred HHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHhc
Q psy10337 18 EKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIERN 86 (87)
Q Consensus 18 ~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~~ 86 (87)
...++++|+++++.+..+++.++|++||.||++++|++++|||++..+|++|++|||+++|++.+++++
T Consensus 358 ~~~~s~aK~~ase~a~~v~~~a~qi~GG~G~~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia~~ll~~~ 426 (597)
T 3owa_A 358 AIECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKA 426 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccChHHHHHHHhhhhheeCcHHHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999999999999999999999864
No 6
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=99.66 E-value=1.3e-16 Score=100.72 Aligned_cols=68 Identities=41% Similarity=0.710 Sum_probs=64.5
Q ss_pred HHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHH
Q psy10337 17 VEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84 (87)
Q Consensus 17 ~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~ 84 (87)
.....+++|+++++.+.++++.++|++||.||++++|++++|||++..+|++|++|+|+++|++.+|+
T Consensus 326 ~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~ll~ 393 (393)
T 3pfd_A 326 LGFISAASKCFASDVAMEVTTDAVQLFGGYGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSRALLR 393 (393)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhchhhccCCChHHHHHHhhcceeeecCHHHHHHHHHHHHHhC
Confidence 45678999999999999999999999999999999999999999999999999999999999999875
No 7
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=99.65 E-value=2.5e-16 Score=98.75 Aligned_cols=71 Identities=34% Similarity=0.594 Sum_probs=66.3
Q ss_pred CChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHH
Q psy10337 14 DYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84 (87)
Q Consensus 14 ~~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~ 84 (87)
+.+....++++|.++++.+.++++.++|++||.||++++|++++|||++...+++|++|+|+++|++.+++
T Consensus 302 g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 372 (372)
T 2dvl_A 302 GERFTLEASAAKLFASAAAVEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR 372 (372)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGGGSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhcCeecCCCCcHHHHHHHhhcceecCCHHHHHHHHHHHHhhC
Confidence 33456789999999999999999999999999999999999999999999999999999999999998874
No 8
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=99.65 E-value=3.9e-16 Score=98.47 Aligned_cols=71 Identities=35% Similarity=0.567 Sum_probs=67.3
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHhc
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIERN 86 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~~ 86 (87)
+....++++|+++++.+.++++.++|++||.||++++|++++|||++..++++|++|+++++|++.+++.|
T Consensus 312 ~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~ 382 (391)
T 2vig_A 312 PFIKEAAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLRSY 382 (391)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhCCeEecCCChHHHHHHHhhcceeecCHHHHHHHHHHHHHHhhc
Confidence 34667999999999999999999999999999999999999999999999999999999999999998865
No 9
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.65 E-value=4.1e-16 Score=98.48 Aligned_cols=70 Identities=29% Similarity=0.554 Sum_probs=66.3
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHh
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~ 85 (87)
+....++++|+++++.+.++++.++|++||.||++++|++++|||++...+++|++|+|+++|++.+|++
T Consensus 324 ~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~ 393 (393)
T 1rx0_A 324 DAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQE 393 (393)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTSTHHHHHHHHHHTTTSSSCHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCChHHHHHHhccCceecCChHHHHHHHHHHHHhcC
Confidence 3467889999999999999999999999999999999999999999999999999999999999998863
No 10
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=99.64 E-value=4.8e-16 Score=98.28 Aligned_cols=73 Identities=18% Similarity=0.317 Sum_probs=67.9
Q ss_pred CCChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHh
Q psy10337 13 SDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85 (87)
Q Consensus 13 ~~~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~ 85 (87)
.+.+....++++|.++++.+.++++.++|++||.||++++|++++|||++..++++|++|+++++|++.+++.
T Consensus 322 ~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg~ 394 (399)
T 3swo_A 322 AEGVRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGK 394 (399)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBSSSTHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCCcHHHHHHHhhcceeecCHHHHHHHHHHHHHcCc
Confidence 3344567889999999999999999999999999999999999999999999999999999999999999874
No 11
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=99.64 E-value=1.9e-16 Score=99.67 Aligned_cols=72 Identities=39% Similarity=0.621 Sum_probs=66.0
Q ss_pred CCChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHH
Q psy10337 13 SDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84 (87)
Q Consensus 13 ~~~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~ 84 (87)
.+.+.....+++|.++++.+.++++.++|++||.||++++|++++|||++..+|++|++|+|+++|++.+++
T Consensus 316 ~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l~~ 387 (387)
T 3nf4_A 316 QGRPYSQQASIAKLTATDAAMKVTTDAVQVFGGVGYTRDYRVERYMREAKIMQIFEGTNQIQRLVIARGLTR 387 (387)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHTTC-
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCcHhhcCCCcHHHHHhHhhcCeeecChHHHHHHHHHHHHhC
Confidence 344556788999999999999999999999999999999999999999999999999999999999997753
No 12
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=99.64 E-value=5.3e-16 Score=97.71 Aligned_cols=70 Identities=33% Similarity=0.616 Sum_probs=66.5
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHh
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~ 85 (87)
+....++++|+++++.+.++++.++|++||.||++++|++++|||++..++++|++|++++.|++.+++.
T Consensus 317 ~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~i~~~~ia~~~l~~ 386 (387)
T 2d29_A 317 PFTLEAAQAKLFASEAAVKACDEAIQILGGYGYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEA 386 (387)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCChHHHHHHHhhCccccCCHHHHHHHHHHHHHhhc
Confidence 4467899999999999999999999999999999999999999999999999999999999999999874
No 13
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=99.64 E-value=3.9e-16 Score=98.82 Aligned_cols=72 Identities=21% Similarity=0.362 Sum_probs=67.3
Q ss_pred CChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHh
Q psy10337 14 DYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85 (87)
Q Consensus 14 ~~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~ 85 (87)
+.+....++++|+++++.+.++++.++|++||.||++++|++++|||++..++++|++|+|+++|++.+++.
T Consensus 328 ~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llgl 399 (403)
T 3sf6_A 328 GELAPEQVSLGKLNNVREAIEIARTARTVLGASGITGEYPVMRHANNLESVLTYEGTSEMHTLIIGQALTGV 399 (403)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSC
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCeEccccCcHHHHHhhcccceeecCHHHHHHHHHHHHHhCc
Confidence 334567889999999999999999999999999999999999999999999999999999999999999864
No 14
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=99.64 E-value=3.6e-16 Score=98.22 Aligned_cols=69 Identities=42% Similarity=0.670 Sum_probs=65.6
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHH
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~ 84 (87)
+....++++|.++++.+.++++.++|++||.||++++|++++|||++..++++|++|+|+++|++.+|+
T Consensus 310 ~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 378 (379)
T 1ukw_A 310 PHAHASAIAKAYASEIAFEAANQAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHILA 378 (379)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhCCeecCCCChHHHHHHHhcCceecCCHHHHHHHHHHHHHhc
Confidence 446789999999999999999999999999999999999999999999999999999999999999875
No 15
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=99.64 E-value=3.2e-16 Score=98.16 Aligned_cols=70 Identities=21% Similarity=0.245 Sum_probs=63.3
Q ss_pred ChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHH
Q psy10337 15 YPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84 (87)
Q Consensus 15 ~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~ 84 (87)
.+....++++|.++++.+.++++.++|++||.||++++|++++|||++..++++|++|+++++|++.+++
T Consensus 294 ~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~~~ia~~~lg 363 (366)
T 1r2j_A 294 PEMVPATILAKHVAAERAAAGAATAAQVLASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQHALA 363 (366)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGC--CCHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHTT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhccCceecCCHHHHHHHHHHHHHhc
Confidence 3446689999999999999999999999999999999999999999999999999999999999999876
No 16
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=99.63 E-value=1.2e-15 Score=97.32 Aligned_cols=71 Identities=15% Similarity=0.303 Sum_probs=67.1
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHhc
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIERN 86 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~~ 86 (87)
+....++++|+++++.+.++++.++|++||.||+++++++++|||++...+++|++++++++|++.+|+.|
T Consensus 350 ~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~ 420 (428)
T 2wbi_A 350 GAKKEIAMIKVAAPRAVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAIATMELRDQ 420 (428)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCCcHHHHHHHHhhcEecCChHHHHHHHHHHHHHHHh
Confidence 34567899999999999999999999999999999999999999999999999999999999999998875
No 17
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=99.62 E-value=4.1e-16 Score=98.49 Aligned_cols=71 Identities=21% Similarity=0.304 Sum_probs=66.7
Q ss_pred CChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHH
Q psy10337 14 DYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84 (87)
Q Consensus 14 ~~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~ 84 (87)
+.+.....+++|.++++.+.++++.++|++||.||++++|++++|||++..++++|++|+|+++|++.+++
T Consensus 321 ~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~~~~~~ia~~llg 391 (396)
T 3ii9_A 321 GTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAQTG 391 (396)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSCSGGGHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHS
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHHhC
Confidence 34456688999999999999999999999999999999999999999999999999999999999999986
No 18
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=99.62 E-value=7e-16 Score=97.01 Aligned_cols=69 Identities=35% Similarity=0.554 Sum_probs=65.4
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHH
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~ 84 (87)
+....++++|.++++.+.++++.++|++||.||++++|++++|||++...+++|++|++++.|++.+++
T Consensus 315 ~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 383 (383)
T 1buc_A 315 PFTVDAAIAKRVASDVAMRVTTEAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALLR 383 (383)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCChHHHHHHHhhcccccCCHHHHHHHHHHHHHhC
Confidence 456788999999999999999999999999999999999999999999999999999999999998864
No 19
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=99.62 E-value=9.4e-16 Score=98.10 Aligned_cols=70 Identities=23% Similarity=0.259 Sum_probs=65.9
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHh
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~ 85 (87)
+.....+++|+++++.+..+++.++|++||.||+++++++++|||++...+++|++|+++++|++.+++.
T Consensus 356 ~~~~~as~aK~~a~e~a~~v~~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~~Gt~ei~~~~iar~llgl 425 (436)
T 2ix5_A 356 MTPGQASLGKAWISSKARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTGI 425 (436)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBGGGSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSC
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCChHHHHHHHhhcceeecCHHHHHHHHHHHHHhCC
Confidence 4456789999999999999999999999999999999999999999999999999999999999998763
No 20
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=99.61 E-value=1e-15 Score=96.89 Aligned_cols=70 Identities=24% Similarity=0.393 Sum_probs=65.0
Q ss_pred CCChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHH
Q psy10337 13 SDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAI 82 (87)
Q Consensus 13 ~~~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~ 82 (87)
.+.+....++++|.++++.+.++++.++|++||.||+++++++++|||++..+|++|++|+|+++|++.+
T Consensus 332 ~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 401 (403)
T 3r7k_A 332 AGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRI 401 (403)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEecCCchHHHHHHHhCcceeecCHHHHHHHHHHHHh
Confidence 3344567799999999999999999999999999999999999999999999999999999999999875
No 21
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=99.61 E-value=1.4e-15 Score=95.77 Aligned_cols=70 Identities=20% Similarity=0.320 Sum_probs=66.0
Q ss_pred ChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHH
Q psy10337 15 YPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84 (87)
Q Consensus 15 ~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~ 84 (87)
.+.....+++|.++++.+.++++.++|++||.||++++|++++|||++..++++|++|+++++|++.+++
T Consensus 312 ~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~~~~~~ia~~llg 381 (385)
T 2eba_A 312 KLTPAQVSLAKRQNVWKALQAARMARDILGGSGITLEYHAIRHMLNLETVYTYEGTHDVHTLVLGREITG 381 (385)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcChHHHHHHhccCceeeCChHHHHHHHHHHHHhC
Confidence 3446678899999999999999999999999999999999999999999999999999999999999876
No 22
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=99.59 E-value=2.4e-15 Score=94.89 Aligned_cols=69 Identities=25% Similarity=0.352 Sum_probs=65.3
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHH
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 84 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~ 84 (87)
+....++++|.++++.+.++++.++|++||.||++++|++++|||++...+++|+++++++.|++.+++
T Consensus 316 ~~~~~~~~aK~~~~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rd~~~~~~~~G~~~~~~~~i~~~llg 384 (392)
T 1siq_A 316 AAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITG 384 (392)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGGGSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcHHHHHhhCcCCeeecCcHHHHHHHHHHHHhC
Confidence 345678999999999999999999999999999999999999999999999999999999999999875
No 23
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=99.58 E-value=3.8e-15 Score=94.30 Aligned_cols=65 Identities=25% Similarity=0.345 Sum_probs=63.2
Q ss_pred HHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHH
Q psy10337 18 EKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAI 82 (87)
Q Consensus 18 ~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~ 82 (87)
...++++|+++++.+.++++.++|++||.||+++++++++|||++..++++|++|+|+++|++.+
T Consensus 335 ~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 399 (403)
T 3p4t_A 335 IAEVCFAKNTAVEAGEWVANQAVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAKTL 399 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhChhhccCCCcHHHHHHHhhcceeccCHHHHHHHHHHHHc
Confidence 67889999999999999999999999999999999999999999999999999999999999987
No 24
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=99.58 E-value=3.7e-15 Score=93.82 Aligned_cols=68 Identities=21% Similarity=0.390 Sum_probs=64.0
Q ss_pred ChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHH
Q psy10337 15 YPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAI 82 (87)
Q Consensus 15 ~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~ 82 (87)
.+....++++|.++++.+.++++.++|++||.||++++|++++|||++...+++|++|+|+++|++.+
T Consensus 316 ~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~l 383 (385)
T 2pg0_A 316 KQIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQL 383 (385)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTSHHHHHHHHGGGGGTTTSCHHHHHHHHHHHT
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHh
Confidence 34567899999999999999999999999999999999999999999999999999999999999864
No 25
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=99.57 E-value=5.5e-15 Score=93.29 Aligned_cols=68 Identities=24% Similarity=0.381 Sum_probs=63.7
Q ss_pred ChHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHH-HHH
Q psy10337 15 YPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVS-RAI 82 (87)
Q Consensus 15 ~~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia-~~~ 82 (87)
.+....++++|+++++.+.++++.++|++||.||++++|++++|||++..+|++|++|+|+++|+ +.+
T Consensus 314 ~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l 382 (397)
T 3mpi_A 314 LNNGLDVAMAKYAAGEAVSKCANYAMRILGAYGYSTEYPVARFYRDAPTYYMVEGSANICKMIIALDQL 382 (397)
T ss_dssp TEEHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHHHHHHHHTTHHHHSSSCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeecCCCCHHHHHhhccceeeecCHHHHHHHHHHHHhc
Confidence 44567889999999999999999999999999999999999999999999999999999999999 554
No 26
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=99.57 E-value=1.5e-14 Score=94.73 Aligned_cols=68 Identities=24% Similarity=0.386 Sum_probs=64.1
Q ss_pred HHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHh
Q psy10337 18 EKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85 (87)
Q Consensus 18 ~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~ 85 (87)
...++++|+++++.+..++..++|++||.||+++++++++|||++...|++||+|||++.|++.+++.
T Consensus 375 ~~~~~~aK~~ase~a~~~~~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~~i~r~l~~~ 442 (541)
T 3djl_A 375 RLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQ 442 (541)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHHHHHHHHHhC
Confidence 35678999999999999999999999999999999999999999999999999999999999988653
No 27
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=99.57 E-value=1.8e-15 Score=99.56 Aligned_cols=68 Identities=28% Similarity=0.523 Sum_probs=64.1
Q ss_pred HHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHh
Q psy10337 18 EKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIER 85 (87)
Q Consensus 18 ~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~ 85 (87)
...++++|+++++.+..+++.++|+|||.||++++|++++|||++..+|++|++++|+++|++.+++.
T Consensus 348 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~~l~~ 415 (577)
T 2z1q_A 348 AVEASIIKVLGSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLLIPGMLLRR 415 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTGGGSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCeeecCCChHHHHHhhCcceeeeCcHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999887654
No 28
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=99.57 E-value=7.7e-15 Score=92.42 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=63.6
Q ss_pred HHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHH-hhhCHHHHHHHHHHHHHHH
Q psy10337 18 EKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQ-IYEGTAQIQRLIVSRAIIE 84 (87)
Q Consensus 18 ~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~-i~~g~~~~~~~~ia~~~l~ 84 (87)
...++++|+++++.+.++++.++|++||.||++++|++++|||++..+ +++|+++++++.|++.+|+
T Consensus 326 ~~~~~~ak~~~~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia~~~Lg 393 (395)
T 3mxl_A 326 MTPFQYAKMTVNELAPAVVDDCLSLVGGLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAVDYLSGQALG 393 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHhccCCCcHHHHHHHHHhccccCCCCHHHHHHHHHHHHhC
Confidence 356788999999999999999999999999999999999999999999 9999999999999999886
No 29
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=99.55 E-value=1.8e-14 Score=90.77 Aligned_cols=68 Identities=12% Similarity=0.183 Sum_probs=64.7
Q ss_pred HHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhC-HHHHHHHHHHHHHHHh
Q psy10337 18 EKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEG-TAQIQRLIVSRAIIER 85 (87)
Q Consensus 18 ~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g-~~~~~~~~ia~~~l~~ 85 (87)
...++++|+++++.+.++++.++|++||.||++++|++++|||++...+++| ++|++++.|++.+++.
T Consensus 319 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~g~~~~~~~~~i~~~llg~ 387 (394)
T 2rfq_A 319 RLRARRDQVRATGRAISSIDKLFESSGATALANGTPLQRFWRDAHAGRVHAANDPERAYVMYGTGEFGL 387 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTCHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChhhhhcCCcHHHHHHHHHHHHcccccCchhHHHHHHHHHhCC
Confidence 4578999999999999999999999999999999999999999999999999 9999999999998863
No 30
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=99.55 E-value=1e-14 Score=93.07 Aligned_cols=67 Identities=18% Similarity=0.339 Sum_probs=64.0
Q ss_pred HHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHH-HHHHHHHHHHHHHh
Q psy10337 19 KLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA-QIQRLIVSRAIIER 85 (87)
Q Consensus 19 ~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~-~~~~~~ia~~~l~~ 85 (87)
..++++|+++++.+.++++.++|++||.||++++|++++|||++..+|++|++ ++++.+|++.++++
T Consensus 350 ~~~~~aK~~a~e~a~~~~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~~~v~~~~i~r~ll~~ 417 (438)
T 3mkh_A 350 ELALAAKVFCSEAAVKACTDVINAVGISAYDLQRPFSDLLNTAVVLPIFDGGNVGIRRRHLQQLMLKP 417 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGGCTTSSHHHHHHHHTHHHHSSSCTTTTHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhhccCCCcHHHHHHHhheeeeecCChHHHHHHHHHHHHHhc
Confidence 34778999999999999999999999999999999999999999999999999 99999999999986
No 31
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=99.51 E-value=2.2e-14 Score=91.23 Aligned_cols=68 Identities=19% Similarity=0.320 Sum_probs=64.8
Q ss_pred HHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHH-HHHHHHHHHHHHHh
Q psy10337 18 EKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA-QIQRLIVSRAIIER 85 (87)
Q Consensus 18 ~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~-~~~~~~ia~~~l~~ 85 (87)
...++++|+++++.+.++++.++|++||.||+++++++++|||++...+++|++ |++++.|++.+++.
T Consensus 347 ~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~e~~~~~ia~~~lg~ 415 (422)
T 2jbr_A 347 LAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMGM 415 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTCHHHHHHHHHHHHTSSTTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHhhhcCCcHHHHHHHHHHHhcCCccchhHHHHHHHHHHhCC
Confidence 457899999999999999999999999999999999999999999999999999 99999999998864
No 32
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=99.50 E-value=6.1e-14 Score=93.58 Aligned_cols=70 Identities=17% Similarity=0.160 Sum_probs=67.1
Q ss_pred HHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHhc
Q psy10337 17 VEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIERN 86 (87)
Q Consensus 17 ~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~~ 86 (87)
....++++|.++++.+.++++.++|++||.||+++++++++|||++...+++|+++++++.+++.+++.+
T Consensus 373 ~~~~~a~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~v~~~~iar~lL~~~ 442 (659)
T 1w07_A 373 AHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTV 442 (659)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGBGGGSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCHHHHHHhcceeEEEeCChHHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999999999999999999999999999999865
No 33
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=99.50 E-value=2.6e-14 Score=90.67 Aligned_cols=68 Identities=12% Similarity=0.154 Sum_probs=64.7
Q ss_pred HHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhC-HHHHHHHHHHHHHHHh
Q psy10337 18 EKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEG-TAQIQRLIVSRAIIER 85 (87)
Q Consensus 18 ~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g-~~~~~~~~ia~~~l~~ 85 (87)
...++++|+++++.+.++++.++|++||.||++++|++++|||++...+++| ++|++++.|++.+|+.
T Consensus 334 ~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~~~lg~ 402 (414)
T 2or0_A 334 RAIGRRTQIAAAWRAVRAADEIFARAGGGALHYKTPMQRFWRDAHAGLAHAVHVPGPTNHASALTQLGG 402 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTSSHHHHHHHHHHHHTSGGGCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhChHhhccCCchhHHHHHHHHHHcCCcccchHHHHHHHHHHhCC
Confidence 4578999999999999999999999999999999999999999999999999 9999999999998763
No 34
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=99.50 E-value=4.4e-14 Score=93.54 Aligned_cols=66 Identities=30% Similarity=0.454 Sum_probs=61.9
Q ss_pred HHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHH
Q psy10337 17 VEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAI 82 (87)
Q Consensus 17 ~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~ 82 (87)
....++++|.++++.+..++..++|++||.||+++++++++|||++...|++|++++++++|+...
T Consensus 363 ~~~~~~~aK~~~se~a~~v~~~a~qv~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~g 428 (607)
T 2uxw_A 363 FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQG 428 (607)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSHHHHHHHHGGGGTSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccHHHHHHHhcccceeeCChHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999996554
No 35
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=99.46 E-value=9.7e-14 Score=92.65 Aligned_cols=70 Identities=16% Similarity=0.293 Sum_probs=66.9
Q ss_pred HHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHHHHHHHHHHHHHHHhc
Q psy10337 17 VEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIERN 86 (87)
Q Consensus 17 ~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ia~~~l~~~ 86 (87)
....++++|.++++.+.++++.|++++||.||+++++++++|||++...+++|+++++++++++.+++.|
T Consensus 370 ~~~~aa~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~vl~~~iar~lL~~~ 439 (661)
T 2ddh_A 370 LHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIY 439 (661)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCcHHHHHHhcceeeEecCchHHHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999999999999999999999999999999998865
No 36
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=99.46 E-value=1.8e-13 Score=87.42 Aligned_cols=68 Identities=13% Similarity=0.152 Sum_probs=63.8
Q ss_pred HHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHH-hhhCHHHHHHHHHHHHHHHh
Q psy10337 18 EKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQ-IYEGTAQIQRLIVSRAIIER 85 (87)
Q Consensus 18 ~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~-i~~g~~~~~~~~ia~~~l~~ 85 (87)
...++++|+++.+.+.++++.++|++||.||+++++++++|||++..+ +++|+++++++.|++.+|+.
T Consensus 337 ~~~~~~ak~~a~~~a~~v~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i~~~~lg~ 405 (439)
T 3m9v_A 337 MRHFQCAKLAVNRLAPEIVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFLSAQALGI 405 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCchHHHHHHHHHHHhCC
Confidence 456778899999999999999999999999999999999999999999 99999999999999998864
No 37
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=99.41 E-value=2.3e-13 Score=86.95 Aligned_cols=66 Identities=15% Similarity=0.346 Sum_probs=61.3
Q ss_pred HHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHhhhCHH-HHHHHHHHHHHH
Q psy10337 18 EKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA-QIQRLIVSRAII 83 (87)
Q Consensus 18 ~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i~~g~~-~~~~~~ia~~~l 83 (87)
...++++|+++++.+.++++.++|++||.||++++|++++|||++...+++|++ +++++.|++.+.
T Consensus 352 ~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~~~~~~~~i~~~l~ 418 (439)
T 2c12_A 352 LEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMA 418 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTTSSHHHHHHHHTTTTTSSSCTTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCceEEcCCChHHHHHHhhhcceeecCChHHHHHHHHHHHHh
Confidence 346889999999999999999999999999999999999999999999999988 799999987553
No 38
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=98.46 E-value=2.5e-07 Score=60.12 Aligned_cols=64 Identities=13% Similarity=-0.006 Sum_probs=53.8
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhhhhHHh------hhCHHHHHHHHHHHHH
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQI------YEGTAQIQRLIVSRAI 82 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~~~~~i------~~g~~~~~~~~ia~~~ 82 (87)
+....++++|+++++.+.++++.++|++||.+++ +|+++.| +.+..++ ..|+++++|..|++.+
T Consensus 353 ~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~e~~~-~~~i~~~l~~~l~~~g~~~~~r~~i~rl~ 422 (481)
T 2yyk_A 353 PDRGALDGARNLYPRLYPRIREILEQIGASGLIT--LPSEKDF-KGPLGPFLEKFLQGAALEAKERVALFRLA 422 (481)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CCCHHHH-HSTTHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--CccHHHh-ChhhhHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 3356899999999999999999999999998777 8888888 8855442 3599999999999754
No 39
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=98.29 E-value=3.3e-07 Score=59.70 Aligned_cols=43 Identities=14% Similarity=-0.045 Sum_probs=37.6
Q ss_pred HHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCCchHHHHhhhh
Q psy10337 17 VEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDA 61 (87)
Q Consensus 17 ~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~~~~~~~~~~~ 61 (87)
....++++|+++++...++++.++|++||.|++ +|+++.|||.
T Consensus 362 ~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~er~~rd~ 404 (490)
T 1u8v_A 362 DLLLANVCKQNITRFPYEIVRLAEDIAGGLMVT--MPSEADFKSE 404 (490)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHCTHHHH--CCCHHHHTCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhc--ChHHHHHhCc
Confidence 356899999999999999999999999999998 6666777766
No 40
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=96.62 E-value=0.0025 Score=42.02 Aligned_cols=35 Identities=11% Similarity=0.045 Sum_probs=31.3
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccC
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNS 50 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~ 50 (87)
|-...++++|.++++...+++..++|++||.|++.
T Consensus 358 P~~~~a~~aK~~a~~~~~rv~~eaiqi~GG~g~~~ 392 (517)
T 4g5e_A 358 PNILIYDFGRALYLENFSQMIYELVDLSGRSALIF 392 (517)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence 34567899999999999999999999999999983
No 41
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=96.25 E-value=0.0051 Score=40.54 Aligned_cols=36 Identities=8% Similarity=0.067 Sum_probs=32.0
Q ss_pred hHHHHHHHhhhHhhHhHHHHHHHHHHHHhcCcccCC
Q psy10337 16 PVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSD 51 (87)
Q Consensus 16 ~~~~~~~~aK~~~~~~~~~~~~~a~~~~G~~g~~~~ 51 (87)
+....++++|+++++...++++.++|++||.+++.+
T Consensus 357 p~~~~as~AK~~ase~~~rv~~~a~qi~GG~~i~~P 392 (515)
T 3hwc_A 357 PNPLIYDFGRAHFLQNQMSVMYELLDLAGRSSLMIP 392 (515)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCC
Confidence 446779999999999999999999999999998743
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=95.29 E-value=0.0064 Score=40.66 Aligned_cols=38 Identities=42% Similarity=0.882 Sum_probs=34.1
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRL 39 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a 39 (87)
++|+||+.||..++++++.++++|......+++.++..
T Consensus 379 a~qi~GG~G~~~e~~ler~~RDar~~~i~eGt~ei~r~ 416 (597)
T 3owa_A 379 GVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRL 416 (597)
T ss_dssp HHHHHGGGGGBTTSHHHHHHHHHGGGGTSSSCHHHHHH
T ss_pred HHHhhCCccccccChHHHHHHHhhhhheeCcHHHHHHH
Confidence 67999999999999999999999999999888766553
No 43
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=95.28 E-value=0.0057 Score=38.41 Aligned_cols=38 Identities=63% Similarity=1.018 Sum_probs=33.9
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRL 39 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a 39 (87)
++|+||+.||..++++++.++.+|......+++.++..
T Consensus 342 a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~ 379 (387)
T 3nf4_A 342 AVQVFGGVGYTRDYRVERYMREAKIMQIFEGTNQIQRL 379 (387)
T ss_dssp HHHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred HHHhhCcHhhcCCCcHHHHHhHhhcCeeecChHHHHHH
Confidence 57999999999999999999999999998888776654
No 44
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=95.22 E-value=0.0067 Score=38.23 Aligned_cols=38 Identities=63% Similarity=1.097 Sum_probs=33.8
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRL 39 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a 39 (87)
++|+||+.||..++++++.++.+|......+++.++..
T Consensus 348 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~ 385 (393)
T 3pfd_A 348 AVQLFGGYGYTQDFPVERMMRDAKITQIYEGTNQIQRV 385 (393)
T ss_dssp HHHHTGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred HHHHhchhhccCCChHHHHHHhhcceeeecCHHHHHHH
Confidence 57999999999999999999999999998888776653
No 45
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=95.20 E-value=0.0072 Score=38.32 Aligned_cols=38 Identities=53% Similarity=0.809 Sum_probs=33.8
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRL 39 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a 39 (87)
++|+||+.||..++++++..+.+|......+++.++..
T Consensus 357 a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~ 394 (404)
T 2jif_A 357 CIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLN 394 (404)
T ss_dssp HHHHHGGGGGBTTSSHHHHHHHHGGGGTTTSCHHHHHH
T ss_pred HHHhcCcceecCCCcHHHHHhhccceeecCCHHHHHHH
Confidence 67999999999999999999999999998888766653
No 46
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=95.18 E-value=0.0083 Score=39.86 Aligned_cols=39 Identities=44% Similarity=0.932 Sum_probs=35.0
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLI 40 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a~ 40 (87)
++|+||+.||..++++++.++.++......+++.++..+
T Consensus 369 a~qi~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ 407 (577)
T 2z1q_A 369 GVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLL 407 (577)
T ss_dssp HHHHHGGGGGBTTSHHHHHHHHHGGGGTTTSCHHHHHHH
T ss_pred HHHHhCCeeecCCChHHHHHhhCcceeeeCcHHHHHHHH
Confidence 679999999999999999999999999999998766544
No 47
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=95.16 E-value=0.0073 Score=37.86 Aligned_cols=38 Identities=55% Similarity=0.986 Sum_probs=33.7
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRL 39 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a 39 (87)
++|+||+.||..++++++.++.++.+....+++.++..
T Consensus 333 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~ 370 (379)
T 1ukw_A 333 AIQIHGGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRL 370 (379)
T ss_dssp HHHHHGGGGGSTTSSHHHHHHHHHGGGTTTSCHHHHHH
T ss_pred HHHhhCCeecCCCChHHHHHHHhcCceecCCHHHHHHH
Confidence 57999999999999999999999999998888766543
No 48
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=95.15 E-value=0.01 Score=37.29 Aligned_cols=38 Identities=26% Similarity=0.611 Sum_probs=33.5
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRL 39 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a 39 (87)
++|+||+.||..++++++.++.++......+.+.++..
T Consensus 340 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~ 377 (385)
T 2pg0_A 340 AMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKT 377 (385)
T ss_dssp HHHHTGGGGGBTTSHHHHHHHHGGGGGTTTSCHHHHHH
T ss_pred HHHHhCccccCCCCcHHHHHhhhcCceeecCHHHHHHH
Confidence 57999999999999999999999999998887665543
No 49
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=95.13 E-value=0.007 Score=38.31 Aligned_cols=38 Identities=32% Similarity=0.544 Sum_probs=33.9
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRL 39 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a 39 (87)
++|+||+.||..++++++.++.+|......+++.++..
T Consensus 358 a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~ 395 (403)
T 3r7k_A 358 AVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNE 395 (403)
T ss_dssp HHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHH
T ss_pred HHHhcCCeEecCCchHHHHHHHhCcceeecCHHHHHHH
Confidence 57999999999999999999999999998888776653
No 50
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=95.05 E-value=0.0085 Score=37.42 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=30.6
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++......+....+.
T Consensus 318 a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~ 354 (366)
T 1r2j_A 318 AAQVLASAGAREGHVVERAYRDAKLMEIIEGSSEMCR 354 (366)
T ss_dssp HHHHHGGGGC--CCHHHHHHHHHHHHHHSSSCHHHHH
T ss_pred HHHhhCCeeecCCCcHHHHHHhccCceecCCHHHHHH
Confidence 6799999999999999999999999998888766554
No 51
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=95.01 E-value=0.0093 Score=37.66 Aligned_cols=37 Identities=22% Similarity=0.470 Sum_probs=32.9
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++......+.+.++.
T Consensus 348 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~ 384 (399)
T 3swo_A 348 CRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHL 384 (399)
T ss_dssp HHHHHGGGGGBSSSTHHHHHHHHHHHHHSSSCHHHHH
T ss_pred HHHhhCcccccCCCcHHHHHHHhhcceeecCHHHHHH
Confidence 5799999999999999999999999998888776654
No 52
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=95.00 E-value=0.0078 Score=37.97 Aligned_cols=37 Identities=35% Similarity=0.739 Sum_probs=32.6
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.+|......+++.++.
T Consensus 347 a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~ 383 (393)
T 1rx0_A 347 ALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMR 383 (393)
T ss_dssp HHHHTGGGGGBTTSTHHHHHHHHHHTTTSSSCHHHHH
T ss_pred HHHhcCCeeecCCChHHHHHHhccCceecCChHHHHH
Confidence 6799999999999999999999999988887776554
No 53
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=94.96 E-value=0.0079 Score=37.59 Aligned_cols=38 Identities=55% Similarity=0.962 Sum_probs=33.5
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRL 39 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a 39 (87)
++|+||+.||..++++++.++.+|......+++.++..
T Consensus 327 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~ 364 (372)
T 2dvl_A 327 AVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRL 364 (372)
T ss_dssp HHHHTGGGGGSGGGSHHHHHHHHHGGGTTTSCHHHHHH
T ss_pred HHHhhcCeecCCCCcHHHHHHHhhcceecCCHHHHHHH
Confidence 57999999999999999999999999988888766543
No 54
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=94.91 E-value=0.0093 Score=37.81 Aligned_cols=37 Identities=22% Similarity=0.612 Sum_probs=33.1
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++......+.+..+.
T Consensus 365 a~qi~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~ 401 (415)
T 4hr3_A 365 AIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHR 401 (415)
T ss_dssp HHHHTGGGGGSSSSSHHHHHHHHHHTTTTTSCHHHHH
T ss_pred HHHHhCccccCCCchHHHHHHHhhhheeecCcHHHHH
Confidence 6799999999999999999999999999888876654
No 55
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=94.89 E-value=0.0099 Score=37.36 Aligned_cols=37 Identities=43% Similarity=0.817 Sum_probs=32.9
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++......+.+.++.
T Consensus 340 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~i~~ 376 (387)
T 2d29_A 340 AIQILGGYGYVKDYPVERYWRDARLTRIGEGTSEILK 376 (387)
T ss_dssp HHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHH
T ss_pred HHHhcCCeecCCCChHHHHHHHhhCccccCCHHHHHH
Confidence 6799999999999999999999999999888766554
No 56
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=94.88 E-value=0.011 Score=37.28 Aligned_cols=39 Identities=36% Similarity=0.801 Sum_probs=34.8
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLI 40 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a~ 40 (87)
++|+||+.||..++++++.++.++.+....+++.++..+
T Consensus 338 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ 376 (397)
T 3mpi_A 338 AMRILGAYGYSTEYPVARFYRDAPTYYMVEGSANICKMI 376 (397)
T ss_dssp HHHHHGGGGGSTTSHHHHHHHHTTHHHHSSSCHHHHHHH
T ss_pred HHHHhCCeeecCCCCHHHHHhhccceeeecCHHHHHHHH
Confidence 578999999999999999999999999998888776643
No 57
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=94.83 E-value=0.011 Score=37.33 Aligned_cols=37 Identities=76% Similarity=1.264 Sum_probs=33.2
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++......+++.++.
T Consensus 347 a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~ 383 (396)
T 1egd_A 347 AVQILGGNGFNTEYPVEKLMRDAKIYQIYGGTSQIQR 383 (396)
T ss_dssp HHHHHGGGTTBTTSSHHHHHHHHGGGGTTTSCHHHHH
T ss_pred HHHHhCcccccCCChHHHHHHHhhCeeecCCHHHHHH
Confidence 5799999999999999999999999999888876654
No 58
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=94.83 E-value=0.0095 Score=37.54 Aligned_cols=38 Identities=45% Similarity=0.957 Sum_probs=33.4
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRL 39 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a 39 (87)
++|+||+.||..++++++..+.++......+.+.++..
T Consensus 346 a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~ 383 (394)
T 1ivh_A 346 GIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRL 383 (394)
T ss_dssp HHHHHGGGGGBTTSTHHHHHHHHHHTTTTTSCHHHHHH
T ss_pred HHHhcCCccccCCchHHHHHHhcccccccCChHHHHHH
Confidence 57999999999999999999999999988887766543
No 59
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=94.76 E-value=0.011 Score=37.47 Aligned_cols=37 Identities=27% Similarity=0.598 Sum_probs=32.8
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.+|......+++.++.
T Consensus 353 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~ 389 (403)
T 3sf6_A 353 ARTVLGASGITGEYPVMRHANNLESVLTYEGTSEMHT 389 (403)
T ss_dssp HHHHHGGGGGSTTSSHHHHHHHHHHHHHSSSCHHHHH
T ss_pred HHHhcCCeEccccCcHHHHHhhcccceeecCHHHHHH
Confidence 6799999999999999999999999998888776554
No 60
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=94.72 E-value=0.013 Score=37.45 Aligned_cols=37 Identities=22% Similarity=0.573 Sum_probs=32.3
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++......+....+.
T Consensus 373 a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G~~~~~~ 409 (428)
T 2wbi_A 373 AIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHL 409 (428)
T ss_dssp HHHHTGGGGGSTTSSHHHHHHHHHHHTTTTSCHHHHH
T ss_pred HHHHhCCcccCCCCcHHHHHHHHhhcEecCChHHHHH
Confidence 6799999999999999999999999988887765543
No 61
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=94.69 E-value=0.012 Score=36.90 Aligned_cols=37 Identities=54% Similarity=0.978 Sum_probs=32.8
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++..+.++......+...++.
T Consensus 338 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~ 374 (383)
T 1buc_A 338 AVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQL 374 (383)
T ss_dssp HHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHH
T ss_pred HHHhcCCeecCCCChHHHHHHHhhcccccCCHHHHHH
Confidence 5799999999999999999999999998888766554
No 62
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=94.68 E-value=0.012 Score=37.05 Aligned_cols=37 Identities=46% Similarity=0.868 Sum_probs=32.7
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++.+....+.+.++.
T Consensus 335 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~~~~ 371 (391)
T 2vig_A 335 AIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQR 371 (391)
T ss_dssp HHHHHGGGGGBTTSSHHHHHHHHHHHTTTTSCHHHHH
T ss_pred HHHhhCCeEecCCChHHHHHHHhhcceeecCHHHHHH
Confidence 5799999999999999999999999998888766553
No 63
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=94.62 E-value=0.012 Score=36.89 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=32.3
Q ss_pred cccccccccccCCChHHHHHHHhhhHh-hHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQ-IYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~-~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++... ...+.+....
T Consensus 347 a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~ 384 (395)
T 3mxl_A 347 CLSLVGGLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAV 384 (395)
T ss_dssp HHHHHCGGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHH
T ss_pred HHHHhChHhccCCCcHHHHHHHHHhccccCCCCHHHHH
Confidence 579999999999999999999999999 7777766544
No 64
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=94.61 E-value=0.012 Score=37.31 Aligned_cols=37 Identities=35% Similarity=0.576 Sum_probs=33.3
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++......+++.++.
T Consensus 356 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~ 392 (403)
T 3p4t_A 356 AVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEILT 392 (403)
T ss_dssp HHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHH
T ss_pred HHHhhChhhccCCCcHHHHHHHhhcceeccCHHHHHH
Confidence 5799999999999999999999999999888876665
No 65
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=94.56 E-value=0.012 Score=37.01 Aligned_cols=37 Identities=24% Similarity=0.538 Sum_probs=32.5
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++.+....+......
T Consensus 336 a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~~~~ 372 (385)
T 2eba_A 336 ARDILGGSGITLEYHAIRHMLNLETVYTYEGTHDVHT 372 (385)
T ss_dssp HHHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHH
T ss_pred HHHHhCCcccCCcChHHHHHHhccCceeeCChHHHHH
Confidence 6799999999999999999999999998888765544
No 66
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=94.54 E-value=0.0091 Score=37.66 Aligned_cols=37 Identities=27% Similarity=0.650 Sum_probs=31.6
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++......+.+.++.
T Consensus 346 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~~~~ 382 (396)
T 3ii9_A 346 ARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHA 382 (396)
T ss_dssp HHHHHCSCSCSGGGHHHHHHHHHHHHHHHHCSSCHHH
T ss_pred HHHhhCcccccCCCcHHHHHhhhcCceeecCHHHHHH
Confidence 5799999999999999999999998888777665443
No 67
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=94.54 E-value=0.012 Score=37.85 Aligned_cols=37 Identities=35% Similarity=0.557 Sum_probs=32.4
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++.++.++.+....+...++.
T Consensus 379 a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~~Gt~ei~~ 415 (436)
T 2ix5_A 379 GRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINT 415 (436)
T ss_dssp HHHHTGGGGGBGGGSHHHHHHHHHHHHHSSSCHHHHH
T ss_pred HHHHhCccccccCChHHHHHHHhhcceeecCHHHHHH
Confidence 6799999999999999999999999998877765554
No 68
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=94.31 E-value=0.013 Score=36.93 Aligned_cols=37 Identities=30% Similarity=0.591 Sum_probs=32.5
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
++|+||+.||..++++++..+.++......+...++.
T Consensus 339 a~q~~Gg~g~~~~~~l~r~~Rd~~~~~~~~G~~~~~~ 375 (392)
T 1siq_A 339 ARDMLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHA 375 (392)
T ss_dssp HHHHTGGGGGSGGGSHHHHHHHHHHHTTSSSCHHHHH
T ss_pred HHHHhCCccccCCCcHHHHHhhCcCCeeecCcHHHHH
Confidence 5799999999999999999999999998887765554
No 69
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=94.23 E-value=0.042 Score=36.38 Aligned_cols=38 Identities=29% Similarity=0.586 Sum_probs=34.2
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRL 39 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~a 39 (87)
++|++|+.||..++++++.++.++......+++.++..
T Consensus 396 a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~ 433 (541)
T 3djl_A 396 AMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCL 433 (541)
T ss_dssp HHHHHGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHH
T ss_pred HHHhhCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHH
Confidence 57899999999999999999999999999998876653
No 70
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=94.19 E-value=0.024 Score=35.60 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=30.9
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhH-HHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEG-TAQI 36 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~-~~~~ 36 (87)
++|+||+.||..++++++.++.++......+ ....
T Consensus 340 a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~g~~~~~ 375 (394)
T 2rfq_A 340 LFESSGATALANGTPLQRFWRDAHAGRVHAANDPER 375 (394)
T ss_dssp HHHHHGGGGGBTTCHHHHHHHHHHHHTTSGGGCHHH
T ss_pred HHHHhChhhhhcCCcHHHHHHHHHHHHcccccCchh
Confidence 5799999999999999999999999999887 4443
No 71
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=93.94 E-value=0.01 Score=39.69 Aligned_cols=36 Identities=39% Similarity=0.766 Sum_probs=32.1
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQ 37 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~ 37 (87)
++|+||+.||..++++++.++.+++.....+++.+.
T Consensus 385 a~qv~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~ 420 (607)
T 2uxw_A 385 CIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDIL 420 (607)
T ss_dssp HHHHHTHHHHSSTTSHHHHHHHHGGGGTSSSCHHHH
T ss_pred HHHHhCCccccCccHHHHHHHhcccceeeCChHHHH
Confidence 689999999999999999999999999888876443
No 72
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=93.66 E-value=0.03 Score=35.63 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=30.3
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA 34 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~ 34 (87)
++|+||+.||..++++++.++.++......+.+
T Consensus 368 a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~ 400 (422)
T 2jbr_A 368 LMAAAGATSFMDNSELQRLFRDAHMTGAHAYTD 400 (422)
T ss_dssp HHTTSCGGGGBTTCHHHHHHHHHHHHTSSTTTC
T ss_pred HHHHhCHHhhhcCCcHHHHHHHHHHHhcCCccc
Confidence 679999999999999999999999999888765
No 73
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=93.37 E-value=0.034 Score=35.23 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=29.0
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEG 32 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~ 32 (87)
++|++|+.||..++++++.++.++......+
T Consensus 355 a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G 385 (414)
T 2or0_A 355 IFARAGGGALHYKTPMQRFWRDAHAGLAHAV 385 (414)
T ss_dssp HHTTSCGGGGBTTSSHHHHHHHHHHHHTSGG
T ss_pred HHHhhChHhhccCCchhHHHHHHHHHHcCCc
Confidence 6899999999999999999999999998877
No 74
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=93.05 E-value=0.016 Score=37.00 Aligned_cols=33 Identities=18% Similarity=0.418 Sum_probs=30.4
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA 34 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~ 34 (87)
++|++|+.||..++++++.++++|.+....+.+
T Consensus 370 a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~ 402 (438)
T 3mkh_A 370 VINAVGISAYDLQRPFSDLLNTAVVLPIFDGGN 402 (438)
T ss_dssp HHHHHGGGGGCTTSSHHHHHHHHTHHHHSSSCT
T ss_pred HHHHhchhhccCCCcHHHHHHHhheeeeecCCh
Confidence 679999999999999999999999999888765
No 75
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=92.39 E-value=0.13 Score=32.83 Aligned_cols=33 Identities=18% Similarity=0.402 Sum_probs=28.5
Q ss_pred cccccccccccCCChHHHHHHHhhhHh-hHhHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQ-IYEGTA 34 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~-~~~~~~ 34 (87)
++|+||+.||..++++.+.++.++... ...+.+
T Consensus 358 a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~ 391 (439)
T 3m9v_A 358 CLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAY 391 (439)
T ss_dssp HHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCH
T ss_pred HHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCch
Confidence 679999999999999999999999998 544444
No 76
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=90.65 E-value=0.098 Score=35.41 Aligned_cols=37 Identities=19% Similarity=0.234 Sum_probs=32.3
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
|+|+|||.||..++++++..+.++...+..+.+.+..
T Consensus 395 a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~v~~ 431 (659)
T 1w07_A 395 CRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVLQ 431 (659)
T ss_dssp HHHTTGGGGGBGGGSHHHHHHHHGGGGTTTSCHHHHH
T ss_pred HHHHhcCcccccccCHHHHHHhcceeEEEeCChHHHH
Confidence 6789999999999999999999999999888665543
No 77
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=90.45 E-value=0.054 Score=34.59 Aligned_cols=33 Identities=15% Similarity=0.467 Sum_probs=29.5
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA 34 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~ 34 (87)
++|+||+.||..++++++.++.++.+....+.+
T Consensus 373 a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~ 405 (439)
T 2c12_A 373 AMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGN 405 (439)
T ss_dssp HHHHHCGGGGBTTSSHHHHHHHHTTTTTSSSCT
T ss_pred HHHhcCceEEcCCChHHHHHHhhhcceeecCCh
Confidence 579999999999999999999999998877644
No 78
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=86.07 E-value=0.13 Score=34.81 Aligned_cols=37 Identities=14% Similarity=0.268 Sum_probs=32.3
Q ss_pred cccccccccccCCChHHHHHHHhhhHhhHhHHHHHHH
Q psy10337 2 SHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQR 38 (87)
Q Consensus 2 ~~~i~g~~g~~~~~~~~~~~~~aK~~~~~~~~~~~~~ 38 (87)
|++++|+.||..++++++..+.++...+..+.+.+..
T Consensus 392 a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~vl~ 428 (661)
T 2ddh_A 392 CRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMM 428 (661)
T ss_dssp HHHHTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHHHH
T ss_pred HHHHhCcccccccCcHHHHHHhcceeeEecCchHHHH
Confidence 6789999999999999999999999999887765544
Done!