BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10338
(312 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VSA3|ACADM_DROME Probable medium-chain specific acyl-CoA dehydrogenase,
mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1
SV=1
Length = 419
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 87/111 (78%), Gaps = 3/111 (2%)
Query: 85 GIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTF 144
G + + GL G E NMGQRASDTRGITFEDVRVPKENVL+GEGAGFKIAM TF
Sbjct: 217 GFIVERDSPGLTPGR---KELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTF 273
Query: 145 DKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSI 195
DKTRPPVAAGAVGLAQRCLDEA KYALERK FGVPIA HQ + + ++I
Sbjct: 274 DKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAI 324
Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 73/105 (69%), Gaps = 27/105 (25%)
Query: 219 GGLELSVFDGCLVAEELAYGCTGIMTALEASGLG-------------------------- 252
GGL+L VF CL AEELAYGCTGIMTALEASGLG
Sbjct: 92 GGLDLDVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLV 151
Query: 253 -AYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANW 296
AYCVTEPGAGSDV+G+KT+A KKGDEW++NGQKMWITNGGVANW
Sbjct: 152 AAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANW 196
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 40/44 (90%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M TFDKTRPPVAAGAVGLAQRCLDEA KYALERK FGVPIA HQ
Sbjct: 270 MGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQ 313
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 44/53 (83%)
Query: 50 LNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPA 102
L E Q + Q LARKF REEIIPVAA++D++GEYPW I+KKA ELGL+N HIPA
Sbjct: 37 LTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPA 89
>sp|P41367|ACADM_PIG Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADM PE=1 SV=3
Length = 421
Score = 144 bits (363), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 74/88 (84%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
I E NMGQR SDTRGI FEDVRVPKENVL GEGAGFKIAM TFDKTRPPVAAGAVGL
Sbjct: 232 QIGRKEINMGQRCSDTRGIVFEDVRVPKENVLTGEGAGFKIAMGTFDKTRPPVAAGAVGL 291
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGM 186
AQR LDEATKYALERK FG +A HQG+
Sbjct: 292 AQRALDEATKYALERKTFGKLLAEHQGI 319
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 78/131 (59%), Gaps = 32/131 (24%)
Query: 193 VSIFEREIQLMLLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALEASGLG 252
V + +R +L L+ H F GGL L + D CL+ EELAYGCTG+ TA+EA+ LG
Sbjct: 75 VPLLKRAWELGLMNTHIPESF-----GGLGLGIIDSCLITEELAYGCTGVQTAIEANTLG 129
Query: 253 ---------------------------AYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQK 285
AYCVTEPGAGSDV G+KTKA KKGDE+I+NGQK
Sbjct: 130 QVPLIIGGNYQQQKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQK 189
Query: 286 MWITNGGVANW 296
MWITNGG ANW
Sbjct: 190 MWITNGGKANW 200
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 54/75 (72%)
Query: 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQ 105
F EL E Q+EFQA ARKF REEIIPVAAE+DRTGEYP ++K+A ELGL+N HIP S
Sbjct: 37 FSFELTEQQKEFQATARKFAREEIIPVAAEYDRTGEYPVPLLKRAWELGLMNTHIPESFG 96
Query: 106 NMGQRASDTRGITFE 120
+G D+ IT E
Sbjct: 97 GLGLGIIDSCLITEE 111
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 38/44 (86%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M TFDKTRPPVAAGAVGLAQR LDEATKYALERK FG +A HQ
Sbjct: 274 MGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQ 317
>sp|P08503|ACADM_RAT Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadm PE=1 SV=1
Length = 421
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 74/88 (84%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
HI E NMGQR SDTRGITFEDVRVPKENVL+GEGAGFKIAM FD+TRP VAAGAVGL
Sbjct: 232 HIGKKELNMGQRCSDTRGITFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGL 291
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGM 186
AQR LDEATKYAL+RK FG + HQG+
Sbjct: 292 AQRALDEATKYALDRKTFGKLLVEHQGV 319
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 76/129 (58%), Gaps = 32/129 (24%)
Query: 195 IFEREIQLMLLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALEASGLG-- 252
+ +R +L L+ H + GGL L FD CL+ EELAYGCTG+ TA+EA+ LG
Sbjct: 77 LIKRAWELGLINTH-----IPESCGGLGLGTFDACLITEELAYGCTGVQTAIEANSLGQM 131
Query: 253 -------------------------AYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMW 287
AYCVTEP AGSDV G+KTKA KKGDE+++NGQKMW
Sbjct: 132 PVIIAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAGIKTKAEKKGDEYVINGQKMW 191
Query: 288 ITNGGVANW 296
ITNGG ANW
Sbjct: 192 ITNGGKANW 200
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQ 105
F EL E Q+EFQ +ARKF REEIIPVA ++D++GEYP+ ++K+A ELGLIN HIP S
Sbjct: 37 FSFELTEQQKEFQTIARKFAREEIIPVAPDYDKSGEYPFPLIKRAWELGLINTHIPESCG 96
Query: 106 NMGQRASDTRGITFE 120
+G D IT E
Sbjct: 97 GLGLGTFDACLITEE 111
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 35/44 (79%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M FD+TRP VAAGAVGLAQR LDEATKYAL+RK FG + HQ
Sbjct: 274 MGAFDRTRPTVAAGAVGLAQRALDEATKYALDRKTFGKLLVEHQ 317
>sp|Q3SZB4|ACADM_BOVIN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADM PE=2 SV=1
Length = 421
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 72/88 (81%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
I E NMGQR SDTRGI FEDVRVPKENVL+GEGAGFKIAM FDKTRPPVAA AVGL
Sbjct: 232 QIGRKELNMGQRCSDTRGIVFEDVRVPKENVLIGEGAGFKIAMGAFDKTRPPVAAAAVGL 291
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGM 186
AQR LDEATKYALERK FG + HQG+
Sbjct: 292 AQRALDEATKYALERKTFGKLLIEHQGI 319
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 78/131 (59%), Gaps = 32/131 (24%)
Query: 193 VSIFEREIQLMLLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALEASGLG 252
V + +R +L L+ H + GGL L FD CL++EELAYGCTG+ TA+EA+ LG
Sbjct: 75 VPLIKRAWELGLMNTH-----IPESCGGLGLGTFDSCLISEELAYGCTGVQTAIEANSLG 129
Query: 253 ---------------------------AYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQK 285
AYCVTEP AGSDV G+KTKA KKGDE+I+NGQK
Sbjct: 130 QMPVIIAGNDQQQKKYLGRMTEEPLMCAYCVTEPVAGSDVAGIKTKAEKKGDEYIINGQK 189
Query: 286 MWITNGGVANW 296
MWITNGG ANW
Sbjct: 190 MWITNGGKANW 200
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQ 105
F E E Q+EFQA ARKF REEIIP+AAE+D+TGEYP ++K+A ELGL+N HIP S
Sbjct: 37 FSFEFTEQQKEFQATARKFAREEIIPLAAEYDKTGEYPVPLIKRAWELGLMNTHIPESCG 96
Query: 106 NMGQRASDT 114
+G D+
Sbjct: 97 GLGLGTFDS 105
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 35/44 (79%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M FDKTRPPVAA AVGLAQR LDEATKYALERK FG + HQ
Sbjct: 274 MGAFDKTRPPVAAAAVGLAQRALDEATKYALERKTFGKLLIEHQ 317
>sp|P45952|ACADM_MOUSE Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acadm PE=1 SV=1
Length = 421
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 73/88 (82%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
HI E NMGQR SDTRGI FEDVRVPKENVL+GEGAGFKIAM FD+TRP VAAGAVGL
Sbjct: 232 HIGKKELNMGQRCSDTRGIAFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGL 291
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGM 186
AQR LDEATKYAL+RK FG + HQG+
Sbjct: 292 AQRALDEATKYALDRKTFGKLLVEHQGV 319
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 75/129 (58%), Gaps = 32/129 (24%)
Query: 195 IFEREIQLMLLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALEASGLG-- 252
+ +R +L L+ H + GGL L FD CL+ EELAYGCTG+ TA+EA+ LG
Sbjct: 77 LIKRAWELGLINAH-----IPESCGGLGLGTFDACLITEELAYGCTGVQTAIEANSLGQM 131
Query: 253 -------------------------AYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMW 287
AYCVTEP AGSDV +KTKA KKGDE+++NGQKMW
Sbjct: 132 PVILAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAAIKTKAEKKGDEYVINGQKMW 191
Query: 288 ITNGGVANW 296
ITNGG ANW
Sbjct: 192 ITNGGKANW 200
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%)
Query: 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQ 105
F EL E Q+EFQA ARKF REEIIPVA E+D++GEYP+ ++K+A ELGLIN HIP S
Sbjct: 37 FSFELTEQQKEFQATARKFAREEIIPVAPEYDKSGEYPFPLIKRAWELGLINAHIPESCG 96
Query: 106 NMGQRASDTRGITFE 120
+G D IT E
Sbjct: 97 GLGLGTFDACLITEE 111
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 35/44 (79%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M FD+TRP VAAGAVGLAQR LDEATKYAL+RK FG + HQ
Sbjct: 274 MGAFDRTRPTVAAGAVGLAQRALDEATKYALDRKTFGKLLVEHQ 317
>sp|P11310|ACADM_HUMAN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADM PE=1 SV=1
Length = 421
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 71/88 (80%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
I E NMGQR SDTRGI FEDV+VPKENVL+G+GAGFK+AM FDKTRP VAAGAVGL
Sbjct: 232 QIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGL 291
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGM 186
AQR LDEATKYALERK FG + HQ +
Sbjct: 292 AQRALDEATKYALERKTFGKLLVEHQAI 319
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 87/151 (57%), Gaps = 43/151 (28%)
Query: 178 VPIAAHQGMYLKI-QY-VSIFEREIQLMLLGVH---NCNVFLVSVSGGLELSVFDGCLVA 232
+P+AA Y K +Y V + R +L L+ H NC GGL L FD CL++
Sbjct: 61 IPVAAE---YDKTGEYPVPLIRRAWELGLMNTHIPENC--------GGLGLGTFDACLIS 109
Query: 233 EELAYGCTGIMTALEASGLG---------------------------AYCVTEPGAGSDV 265
EELAYGCTG+ TA+E + LG AYCVTEPGAGSDV
Sbjct: 110 EELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDV 169
Query: 266 NGVKTKAVKKGDEWILNGQKMWITNGGVANW 296
G+KTKA KKGDE+I+NGQKMWITNGG ANW
Sbjct: 170 AGIKTKAEKKGDEYIINGQKMWITNGGKANW 200
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQ 105
F E E Q+EFQA ARKF REEIIPVAAE+D+TGEYP ++++A ELGL+N HIP +
Sbjct: 37 FSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCG 96
Query: 106 NMG 108
+G
Sbjct: 97 GLG 99
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQAL 60
M FDKTRP VAAGAVGLAQR LDEATKYALERK FG + HQ L E + + L
Sbjct: 274 MGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVE-L 332
Query: 61 AR 62
AR
Sbjct: 333 AR 334
>sp|A5A6I0|ACADM_PANTR Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan
troglodytes GN=ACADM PE=2 SV=1
Length = 421
Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 71/88 (80%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
I E NMGQR SDTRGI FEDV+VP+ENVL+G+GAGFK+AM FDKTRP VAAGAVGL
Sbjct: 232 QIGRKELNMGQRCSDTRGIVFEDVKVPRENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGL 291
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGM 186
AQR LDEATKYALERK FG + HQ +
Sbjct: 292 AQRALDEATKYALERKTFGKLLVEHQAI 319
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 87/151 (57%), Gaps = 43/151 (28%)
Query: 178 VPIAAHQGMYLKI-QY-VSIFEREIQLMLLGVH---NCNVFLVSVSGGLELSVFDGCLVA 232
+P+AA Y K +Y V + R +L L+ H NC GGL L FD CL++
Sbjct: 61 IPVAAE---YDKTGEYPVPLIRRAWELGLMNTHIPENC--------GGLGLGTFDACLIS 109
Query: 233 EELAYGCTGIMTALEASGLG---------------------------AYCVTEPGAGSDV 265
EELAYGCTG+ TA+E + LG AYCVTEPGAGSDV
Sbjct: 110 EELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDV 169
Query: 266 NGVKTKAVKKGDEWILNGQKMWITNGGVANW 296
G+KTKA KKGDE+I+NGQKMWITNGG ANW
Sbjct: 170 AGIKTKAEKKGDEYIINGQKMWITNGGKANW 200
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQ 105
F E E Q+EFQA ARKF REEIIPVAAE+D+TGEYP ++++A ELGL+N HIP +
Sbjct: 37 FSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCG 96
Query: 106 NMG 108
+G
Sbjct: 97 GLG 99
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQAL 60
M FDKTRP VAAGAVGLAQR LDEATKYALERK FG + HQ L E + + L
Sbjct: 274 MGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVE-L 332
Query: 61 AR 62
AR
Sbjct: 333 AR 334
>sp|Q22347|ACADM_CAEEL Probable medium-chain specific acyl-CoA dehydrogenase 10,
mitochondrial OS=Caenorhabditis elegans GN=acdh-10 PE=2
SV=1
Length = 417
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 85/129 (65%), Gaps = 8/129 (6%)
Query: 72 VAAEHDRTGEYPWGIVKKAHELGLINGHIPA-----SEQNMGQRASDTRGITFEDVRVPK 126
V A D + P G KA +++G P E+NMGQR SDTR ITFEDVRVP
Sbjct: 193 VLARSDPNPKTPAG---KAFTAFIVDGDTPGITRGKKEKNMGQRCSDTRVITFEDVRVPA 249
Query: 127 ENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGM 186
ENVL GAGFK+AM+ FD TRP VAAGA+GL+ RCLDE+ KYALERKAFG IA HQ +
Sbjct: 250 ENVLGAPGAGFKVAMEAFDMTRPGVAAGALGLSWRCLDESAKYALERKAFGTVIANHQAV 309
Query: 187 YLKIQYVSI 195
+ +++
Sbjct: 310 QFMLADMAV 318
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 55/105 (52%), Gaps = 27/105 (25%)
Query: 219 GGLELSVFDGCLVAEELAYGCTGIMTALEASGLG-------------------------- 252
GG ++ + L+ E L+YGCTGI + L
Sbjct: 86 GGPGMTTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYISGNEEQKKKYLGALAAEPII 145
Query: 253 -AYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANW 296
+YCVTEPGAGSDVNGVKTK KKGDE+I+NG K WIT GG A W
Sbjct: 146 ASYCVTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWITGGGHAKW 190
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 27 TKYALERKAFGVPIAAHQVFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGI 86
+ L R A GV + +L+ETQ+E Q A KF ++ ++P AA+ D +GE+PW I
Sbjct: 8 SSLGLSRSATGVIATQSRQISFDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEI 67
Query: 87 VKKAHELGLINGHIP 101
V++AH LGL+N IP
Sbjct: 68 VRQAHSLGLMNPQIP 82
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 36/44 (81%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M+ FD TRP VAAGA+GL+ RCLDE+ KYALERKAFG IA HQ
Sbjct: 264 MEAFDMTRPGVAAGALGLSWRCLDESAKYALERKAFGTVIANHQ 307
>sp|A8XNF0|ACAD1_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 1,
mitochondrial OS=Caenorhabditis briggsae GN=CBG15946
PE=3 SV=1
Length = 417
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 84/129 (65%), Gaps = 8/129 (6%)
Query: 72 VAAEHDRTGEYPWGIVKKAHELGLINGHIPA-----SEQNMGQRASDTRGITFEDVRVPK 126
V A D + P G KA +++G P E+NMGQR SDTR ITFEDVRVP
Sbjct: 193 VLARSDSDPKAPAG---KAFTAFIVDGDTPGISRGKKEKNMGQRCSDTRTITFEDVRVPA 249
Query: 127 ENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGM 186
ENVL GAGFK+AM FD TRP VAAGA+GLA RCLDE+ KYAL+RKAFG IA HQ +
Sbjct: 250 ENVLGAPGAGFKVAMGAFDMTRPGVAAGALGLAWRCLDESAKYALQRKAFGTEIANHQAV 309
Query: 187 YLKIQYVSI 195
+ +++
Sbjct: 310 QFMLADMAV 318
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 27/105 (25%)
Query: 219 GGLELSVFDGCLVAEELAYGCTGIMTALEASGLG-------------------------- 252
GG ++ + L+ E L+YGCTG+ + L
Sbjct: 86 GGPGMTTLETALIVEALSYGCTGLQLGIMGPSLAIAPVYIAGNEEQKKKYLGALAAEPII 145
Query: 253 -AYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANW 296
+YCVTEPGAGSDVNGVKTK KKGDE+I+NG K WIT GG A W
Sbjct: 146 ASYCVTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWITGGGHAKW 190
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 27 TKYALERKAFGVPIAAHQVFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGI 86
T L R A GV + + +L++TQ+E QA A KF +E ++P AA+ D +GE+PW I
Sbjct: 8 TSLGLSRSATGVLASQSRQISFDLSDTQKEIQAAALKFSKEVLVPNAAKFDESGEFPWEI 67
Query: 87 VKKAHELGLINGHIP 101
V++AH LGL+N IP
Sbjct: 68 VRQAHSLGLMNPQIP 82
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 35/44 (79%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M FD TRP VAAGA+GLA RCLDE+ KYAL+RKAFG IA HQ
Sbjct: 264 MGAFDMTRPGVAAGALGLAWRCLDESAKYALQRKAFGTEIANHQ 307
>sp|Q8HXY8|ACADM_MACFA Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADM PE=2 SV=1
Length = 421
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 70/88 (79%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
I E NMGQR SDTRGI FEDV+V KENVL+G+GAGFKIAM FDKTRP V++GAVGL
Sbjct: 232 QIGRKELNMGQRCSDTRGIVFEDVKVLKENVLIGDGAGFKIAMGAFDKTRPTVSSGAVGL 291
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGM 186
AQR LDEATKYALERK FG + HQ +
Sbjct: 292 AQRALDEATKYALERKTFGKLLIEHQAI 319
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 78/134 (58%), Gaps = 38/134 (28%)
Query: 193 VSIFEREIQLMLLGVH---NCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALEAS 249
V + R +L L+ H NC GGL L FD CL++EELAYGCTG+ TA+E +
Sbjct: 75 VPLIRRAWELGLMNPHIPQNC--------GGLGLGTFDACLISEELAYGCTGVQTAIEGN 126
Query: 250 GLG---------------------------AYCVTEPGAGSDVNGVKTKAVKKGDEWILN 282
LG AYCVTEPGAGSDV G+KTKA KKGDE+I+N
Sbjct: 127 SLGQMPIIIAGNEQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIIN 186
Query: 283 GQKMWITNGGVANW 296
GQKMWITNGG A+W
Sbjct: 187 GQKMWITNGGKASW 200
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 3/63 (4%)
Query: 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQ 105
F E E Q+EFQA ARKF REEIIPVAAE+D+TGEYP ++++A ELGL+N HIP Q
Sbjct: 37 FSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNPHIP---Q 93
Query: 106 NMG 108
N G
Sbjct: 94 NCG 96
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQAL 60
M FDKTRP V++GAVGLAQR LDEATKYALERK FG + HQ L E + + L
Sbjct: 274 MGAFDKTRPTVSSGAVGLAQRALDEATKYALERKTFGKLLIEHQAISFMLAEMAMKVE-L 332
Query: 61 AR 62
AR
Sbjct: 333 AR 334
>sp|A8WP91|ACAD2_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 2,
mitochondrial OS=Caenorhabditis briggsae GN=CBG00953
PE=3 SV=2
Length = 408
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 72/92 (78%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E+NMGQR SDTR ITFEDVRVP+ENVL GAGFK+AM FD TRP VAAGA+GL+ RCL
Sbjct: 222 EKNMGQRCSDTRTITFEDVRVPEENVLGPPGAGFKVAMSAFDMTRPGVAAGALGLSWRCL 281
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKIQYVSI 195
DE+ KYAL+RKAFG IA HQ + + ++I
Sbjct: 282 DESAKYALQRKAFGTEIANHQAVQFMLSDMAI 313
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 27/105 (25%)
Query: 219 GGLELSVFDGCLVAEELAYGCTGIMTALEASGLG-------------------------- 252
GG ++ + L+ E L+YGCTG+ + L
Sbjct: 81 GGPGMTTLETTLIVEALSYGCTGLQLGIMGPSLAIAPVYIAGNEEQKKKYLGALAAEPII 140
Query: 253 -AYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANW 296
+YCVTEPGAGSDVNGVKTK KKG+E+I+NG K WIT GG A W
Sbjct: 141 ASYCVTEPGAGSDVNGVKTKCEKKGNEYIINGSKAWITGGGHAKW 185
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 49 ELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIP 101
+LNETQ+E QA A KF +E ++P AA+ D +GE+PW I+++AH LGL+N IP
Sbjct: 25 DLNETQKEIQAAALKFSKEVLVPNAAKFDESGEFPWEIIRQAHSLGLMNPQIP 77
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 35/44 (79%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M FD TRP VAAGA+GL+ RCLDE+ KYAL+RKAFG IA HQ
Sbjct: 259 MSAFDMTRPGVAAGALGLSWRCLDESAKYALQRKAFGTEIANHQ 302
>sp|P79273|ACADS_PIG Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADS PE=2 SV=1
Length = 413
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E +G RAS T + FED R+PKEN+L G GFKIAM T D R +A+ A+G++Q L
Sbjct: 228 EDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKIAMKTLDMGRIGIASKALGISQAAL 287
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLM 203
D A YA R+AFGVP+ QG+ K+ +++ +L+
Sbjct: 288 DCAVNYAENRRAFGVPLTKLQGIQFKLADMALALESARLL 327
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 43 HQVFYS-ELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIP 101
H +F S EL ET Q + R F +E++P+AA+ D+ +P VKK ELGL+ +P
Sbjct: 26 HTIFQSVELPETYQMLRQTCRDFAEKELVPIAAQVDKEHRFPEAQVKKMGELGLMAMDVP 85
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNG 291
+G + ++EPG GSD T A D W+L+G K WITN
Sbjct: 149 VGCFALSEPGNGSDAGAAATTAQADHDSWVLSGTKAWITNA 189
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M T D R +A+ A+G++Q LD A YA R+AFGVP+ Q
Sbjct: 265 MKTLDMGRIGIASKALGISQAALDCAVNYAENRRAFGVPLTKLQ 308
>sp|Q07417|ACADS_MOUSE Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acads PE=2 SV=2
Length = 412
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E +G RAS T + FED R+PKEN+L G GFKIAM T D R +A+ A+G+AQ L
Sbjct: 228 EDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKIAMQTLDMGRIGIASQALGIAQASL 287
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLM 203
D A KYA R AFG P+ Q + K+ +++ +L+
Sbjct: 288 DCAVKYAENRNAFGAPLTKLQNIQFKLADMALALESARLL 327
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITN 290
+G + ++EPG GSD T A ++GD W+LNG K WITN
Sbjct: 149 IGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITN 188
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 33 RKAFGVP--IAAHQVFYS-ELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKK 89
R+A GV H V+ S EL ET Q + R F +E++P+AA+ DR +P VKK
Sbjct: 14 RRALGVRDWRRLHTVYQSVELPETHQMLRQTCRDFAEKELVPIAAQLDREHLFPTAQVKK 73
Query: 90 AHELGLINGHIP 101
ELGL+ +P
Sbjct: 74 MGELGLLAMDVP 85
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M T D R +A+ A+G+AQ LD A KYA R AFG P+ Q
Sbjct: 265 MQTLDMGRIGIASQALGIAQASLDCAVKYAENRNAFGAPLTKLQ 308
>sp|P15651|ACADS_RAT Short-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acads PE=1 SV=2
Length = 412
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E +G RAS T + FED R+PKEN+L G GFKIAM T D R +A+ A+G+AQ L
Sbjct: 228 EDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKIAMQTLDMGRIGIASQALGIAQASL 287
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLM 203
D A KYA R AFG P+ Q + K+ +++ +L+
Sbjct: 288 DCAVKYAENRHAFGAPLTKLQNIQFKLADMALALESARLL 327
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 218 SGGLELSVFDGCLVAEELAYGCTG-----IMTALEASGLGAYCVTEPGAGSDVNGVKTKA 272
S G+ +SV + + L +G + I +G + ++EPG GSD T A
Sbjct: 111 STGVIMSVNNSLYLGPILKFGSSQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTA 170
Query: 273 VKKGDEWILNGQKMWITN 290
++GD W+LNG K WITN
Sbjct: 171 REEGDSWVLNGTKAWITN 188
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 43 HQVFYS-ELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIP 101
H V+ S EL ET Q + R F +E++P+AA+ D+ +P VKK ELGL+ +P
Sbjct: 26 HTVYQSVELPETHQMLRQTCRDFAEKELVPIAAQLDKEHLFPTSQVKKMGELGLLAMDVP 85
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M T D R +A+ A+G+AQ LD A KYA R AFG P+ Q
Sbjct: 265 MQTLDMGRIGIASQALGIAQASLDCAVKYAENRHAFGAPLTKLQ 308
>sp|P45867|ACDA_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA
PE=2 SV=1
Length = 379
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 86 IVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFD 145
IV+K E G G E+ +G R+S T I FED VP L EG GFKIAM T D
Sbjct: 185 IVEKDFE-GFFTGK---KEKKLGIRSSPTTEIMFEDCVVPASKRLGEEGEGFKIAMKTLD 240
Query: 146 KTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKI 190
R +AA AVG+AQ LD A +YA ERK FG IA QG+ K+
Sbjct: 241 GGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQGIAFKL 285
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVAN 295
+GA+ +TE G+GSD +KT A + GD+++LNG K++ITNGGVA+
Sbjct: 120 IGAFALTEAGSGSDAGSMKTTAERIGDDYVLNGSKVFITNGGVAD 164
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 27/44 (61%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M T D R +AA AVG+AQ LD A +YA ERK FG IA Q
Sbjct: 236 MKTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQ 279
>sp|Q3ZBF6|ACADS_BOVIN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADS PE=2 SV=1
Length = 412
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E +G RAS T + FED R+PK+++L G GFKIAM T D R +A+ A+G+AQ L
Sbjct: 228 EDKLGIRASSTANLIFEDRRIPKDSLLGEPGLGFKIAMQTLDTGRIGIASQALGIAQAAL 287
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLM 203
D A YA R AFG P+ Q + K+ +++ +L+
Sbjct: 288 DCAVTYAENRSAFGAPLTKLQAIQFKLADMALALESARLL 327
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 43 HQVFYS-ELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIP 101
H V+ S EL ET Q + R F +E+ P+AA+ D+ +P VKK ELGL+ ++P
Sbjct: 26 HTVYQSVELPETHQMLRQTCRDFAEKELFPIAAQVDKEHRFPAAQVKKMGELGLMAMNVP 85
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNE 52
M T D R +A+ A+G+AQ LD A YA R AFG P+ Q +L +
Sbjct: 265 MQTLDTGRIGIASQALGIAQAALDCAVTYAENRSAFGAPLTKLQAIQFKLAD 316
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNG 291
+G + ++EPG GSD T A GD W+L+G K WITN
Sbjct: 149 IGCFALSEPGNGSDAGAAATTARADGDSWVLSGTKAWITNA 189
>sp|P16219|ACADS_HUMAN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADS PE=1 SV=1
Length = 412
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E +G R S T + FED R+PK+++L G GFKIAM T D R +A+ A+G+AQ L
Sbjct: 228 EDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTAL 287
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLM 203
D A YA R AFG P+ Q + K+ +++ +L+
Sbjct: 288 DCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLL 327
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITN 290
+G + ++EPG GSD T A +GD W+LNG K WITN
Sbjct: 149 IGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITN 188
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 43 HQVFYS-ELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIP 101
H ++ S EL ET Q R F +E+ P+AA+ D+ +P VKK LGL+ +P
Sbjct: 26 HTIYQSVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVP 85
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNE 52
M T D R +A+ A+G+AQ LD A YA R AFG P+ QV +L +
Sbjct: 265 MQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLAD 316
>sp|Q5RAS0|ACADS_PONAB Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo
abelii GN=ACADS PE=2 SV=1
Length = 412
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E +G R S T + FED R+PK+++L G GFKIAM T D R +A+ A+G+AQ L
Sbjct: 228 EDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTAL 287
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLM 203
D A YA R AFG P+ Q + K+ +++ +L+
Sbjct: 288 DCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLL 327
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITN 290
+G + ++EPG GSD T A +GD W+LNG K WITN
Sbjct: 149 IGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITN 188
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 43 HQVFYS-ELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIP 101
H ++ S EL ET Q R F +E+ P+AA+ D+ +P VKK LGL+ +P
Sbjct: 26 HTIYQSVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVP 85
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNE 52
M T D R +A+ A+G+AQ LD A YA R AFG P+ QV +L +
Sbjct: 265 MQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLAD 316
>sp|P52042|ACDS_CLOAB Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=bcd PE=3 SV=1
Length = 379
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 72 VAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKENVLL 131
+ A DRT + GI E G I EQ +G RAS T + FED+ VP EN++
Sbjct: 168 IFAMTDRT-KGTKGISAFIIEKGFKGFSIGKVEQKLGIRASSTTELVFEDMIVPVENMIG 226
Query: 132 GEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGM 186
EG GF IAM T D R +AA A+G+A+ +EA Y ERK FG + QG+
Sbjct: 227 KEGKGFPIAMKTLDGGRIGIAAQALGIAEGAFNEARAYMKERKQFGRSLDKFQGL 281
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVAN 295
+GAY +TEP AG+D +T AV +GD +++NG K++ITNGGVA+
Sbjct: 120 IGAYGLTEPNAGTDSGAQQTVAVLEGDHYVINGSKIFITNGGVAD 164
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 50 LNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQ 105
L Q+ + + R+F E+ P+AAE D T +P VKK + G++ IP S++
Sbjct: 5 LTREQELVRQMVREFAENEVKPIAAEIDETERFPMENVKKMGQYGMMG--IPFSKE 58
Score = 34.7 bits (78), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M T D R +AA A+G+A+ +EA Y ERK FG + Q
Sbjct: 236 MKTLDGGRIGIAAQALGIAEGAFNEARAYMKERKQFGRSLDKFQ 279
>sp|Q06319|ACDS_MEGEL Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera
elsdenii PE=1 SV=1
Length = 383
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E MG S T + F+DV+VP EN+L EG GFKIAM T D R VAA A+G+A+ L
Sbjct: 203 EDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIAEAAL 262
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKI 190
+A +Y+ +R FG P+ Q + K+
Sbjct: 263 ADAVEYSKQRVQFGKPLCKFQSISFKL 289
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 246 LEASGLGAYCVTEPGAGSDVNGVKTKAVKKGD-EWILNGQKMWITNGGVAN 295
+E + LGA+ +TEP AG+D +G +T A K D + LNG K++ITNGG A+
Sbjct: 118 VEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAAD 168
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQA 59
M T D R VAA A+G+A+ L +A +Y+ +R FG P+ Q +L + + + +A
Sbjct: 240 MMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEA 298
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 50 LNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHI 100
L + QQ+F LA F +++ P E D G Y ++ + LG+ +
Sbjct: 5 LTDIQQDFLKLAHDFGEKKLAPTVTERDHKGIYDKELIDELLSLGITGAYF 55
>sp|O34421|ACDC_BACSU Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain
168) GN=yngJ PE=3 SV=1
Length = 380
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 52/91 (57%)
Query: 100 IPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLA 159
I + MG R S+T I EDVRVP N+L GFK + T D R +AA AVG+A
Sbjct: 196 ITSPYDKMGVRGSNTAEILLEDVRVPAANLLGDPTKGFKQFLYTLDGGRISIAALAVGIA 255
Query: 160 QRCLDEATKYALERKAFGVPIAAHQGMYLKI 190
Q LD + YA ERK FG PI++ Q + K+
Sbjct: 256 QAALDASLAYAKERKQFGQPISSFQAIQFKL 286
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 249 SGLGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVA 294
+ LG++ +TEP AGSD G +TKA+ GDE+++NG+K WITN A
Sbjct: 118 TALGSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNASYA 163
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3 TFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQALAR 62
T D R +AA AVG+AQ LD + YA ERK FG PI++ Q +L + E LAR
Sbjct: 239 TLDGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEID-LAR 297
Query: 63 KFC 65
+
Sbjct: 298 QMV 300
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 49 ELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQ 105
EL + QQ + + + F ++EI P A D+TGE+P KK ELGL+ IP E+
Sbjct: 4 ELTKEQQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQTFKKMGELGLMG--IPFPEE 58
>sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1
SV=1
Length = 389
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%)
Query: 105 QNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLD 164
+ +G AS T + ++V+VPKEN+L G G +I + + TR AAG VGLAQ CLD
Sbjct: 203 EKLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQACLD 262
Query: 165 EATKYALERKAFGVPIAAHQ 184
A KY ER+ FG PI Q
Sbjct: 263 AAIKYCNERRQFGKPIGDFQ 282
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVAN 295
LG + +TEP AGSDV + + A KGD W+LNG K WI+N A+
Sbjct: 123 LGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQAD 167
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 27/43 (62%)
Query: 3 TFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQV 45
+ + TR AAG VGLAQ CLD A KY ER+ FG PI Q+
Sbjct: 241 SLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGKPIGDFQM 283
>sp|Q5EAD4|ACDSB_BOVIN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADSB PE=2 SV=1
Length = 432
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 57/96 (59%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
H+ E +G RAS T +TFE+V+VPK N+L G G+K A+ + ++ R +AA +G+
Sbjct: 245 HVGKPENKLGIRASSTCPVTFENVKVPKTNILGQVGHGYKYAIGSLNEGRIGIAAQMLGV 304
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVS 194
AQ C D Y ERK FG + QG+ ++ +++
Sbjct: 305 AQGCFDYTIPYIKERKQFGRRVFDFQGLQHQVAHMA 340
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 255 CVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVA 294
C++E GAGSD +KT+A KKGD +I+NG KMWI++ +A
Sbjct: 175 CISETGAGSDSFAMKTRADKKGDYYIINGSKMWISSAEIA 214
>sp|P63427|ACDP_MYCTU Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium
tuberculosis GN=fadE25 PE=3 SV=1
Length = 389
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E+ +G + S T + FE+ R+P + ++ G GFK A+ T D TRP + A AVG+AQ L
Sbjct: 208 ERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGAL 267
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204
D A Y +RK FG I+ Q + + +++ +LM+
Sbjct: 268 DAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMV 308
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 242 IMTALEASG-LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANW 296
++ AL A G + +Y ++E AGSD ++T+A GD WILNG K WITNGG + W
Sbjct: 119 VLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTW 174
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQAL 60
+ T D TRP + A AVG+AQ LD A Y +RK FG I+ Q L + + +A
Sbjct: 245 LATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEA- 303
Query: 61 ARKFCREEIIPVAAEHDRTGEYPWGIVKKAHE 92
R + AA +R GE G + A +
Sbjct: 304 ----ARLMVYSAAARAER-GEPDLGFISAASK 330
>sp|P63428|ACDP_MYCBO Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadE25 PE=3 SV=1
Length = 389
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E+ +G + S T + FE+ R+P + ++ G GFK A+ T D TRP + A AVG+AQ L
Sbjct: 208 ERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGAL 267
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204
D A Y +RK FG I+ Q + + +++ +LM+
Sbjct: 268 DAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMV 308
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 242 IMTALEASG-LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANW 296
++ AL A G + +Y ++E AGSD ++T+A GD WILNG K WITNGG + W
Sbjct: 119 VLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTW 174
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQAL 60
+ T D TRP + A AVG+AQ LD A Y +RK FG I+ Q L + + +A
Sbjct: 245 LATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEA- 303
Query: 61 ARKFCREEIIPVAAEHDRTGEYPWGIVKKAHE 92
R + AA +R GE G + A +
Sbjct: 304 ----ARLMVYSAAARAER-GEPDLGFISAASK 330
>sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC
PE=2 SV=3
Length = 379
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E+ +G S+T + F++ VP+ N+L EG GF IAM + R +AA A+G+A+ L
Sbjct: 197 ERKLGLYGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLNVGRIGIAAQALGIAEAAL 256
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKI 190
+ A YA +R FG PIAA+QG+ K+
Sbjct: 257 EHAVDYAKQRVQFGRPIAANQGISFKL 283
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Query: 248 ASG--LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVAN 295
ASG LGA+ +TEP +GSD ++T A+KK +++LNG K++ITNGG A+
Sbjct: 113 ASGDHLGAFALTEPHSGSDAGSLRTTAIKKNGKYLLNGSKIFITNGGAAD 162
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 49 ELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQ 105
+ + Q + + R F R+EI P A ++T E+P+ ++KK + GL+ IP EQ
Sbjct: 2 HVTQEQVMMRKMVRDFARKEIAPAAEIMEKTDEFPFQLIKKMGKHGLMG--IPVPEQ 56
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
M + R +AA A+G+A+ L+ A YA +R FG PIAA+Q
Sbjct: 234 MANLNVGRIGIAAQALGIAEAALEHAVDYAKQRVQFGRPIAANQ 277
>sp|Q5RF40|ACDSB_PONAB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Pongo abelii GN=ACADSB PE=2 SV=1
Length = 432
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
HI E +G RAS T +TFE+V+VP+ N+L G G+K A+ + ++ R +AA +GL
Sbjct: 245 HIGKPENKLGLRASSTCPLTFENVKVPETNILGQIGHGYKYAIGSLNEGRIGIAAQMLGL 304
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVS 194
AQ C D Y ER FG + QG+ ++ +V+
Sbjct: 305 AQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVA 340
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 246 LEASGLGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITN 290
L +G++C++E GAGSD +KT+A K+GD ++LNG KMWI++
Sbjct: 166 LTTEKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISS 210
>sp|P45954|ACDSB_HUMAN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADSB PE=1 SV=1
Length = 432
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
HI E +G RAS T +TFE+V+VP+ N+L G G+K A+ + ++ R +AA +GL
Sbjct: 245 HIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGL 304
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVS 194
AQ C D Y ER FG + QG+ ++ +V+
Sbjct: 305 AQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVA 340
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 246 LEASGLGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITN 290
L +G++C++E GAGSD +KT+A K+GD ++LNG KMWI++
Sbjct: 166 LTTEKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISS 210
>sp|Q9FS88|IVD1_SOLTU Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum
GN=IVD1 PE=2 SV=1
Length = 412
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%)
Query: 107 MGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEA 166
+G R SDT + FE+ VPKENVL EG G + M D R +AAG VG+ Q C+D
Sbjct: 233 LGMRGSDTCELVFENCFVPKENVLGQEGKGVYVLMSGLDLERLVLAAGPVGIMQACMDIV 292
Query: 167 TKYALERKAFGVPIAAHQ 184
Y +R+ FG PI Q
Sbjct: 293 IPYVRQREQFGRPIGEFQ 310
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 30/137 (21%)
Query: 189 KIQYVSIFEREIQL-MLLGVHNCN-VFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTA- 245
KI + F +EI L L+G N + + GGL L C+ EE++ + +
Sbjct: 59 KIDRTNSFPKEINLWKLMGDFNLHGITAPEEYGGLNLGYLYHCIALEEISRASGAVAVSY 118
Query: 246 ---------------------------LEASGLGAYCVTEPGAGSDVNGVKTKAVKKGDE 278
+ +GA ++EP AGSDV +K +A +
Sbjct: 119 GVQSNVCINQLVRNGTPDQKQKYLPKLISGDHIGALAMSEPNAGSDVVSMKCRADRVDGG 178
Query: 279 WILNGQKMWITNGGVAN 295
++LNG KMW TNG VAN
Sbjct: 179 YVLNGNKMWCTNGPVAN 195
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQAL 60
M D R +AAG VG+ Q C+D Y +R+ FG PI Q+ +L + Q+
Sbjct: 267 MSGLDLERLVLAAGPVGIMQACMDIVIPYVRQREQFGRPIGEFQLIQGKLADMYTALQS- 325
Query: 61 ARKFCREEIIPVAAEHD 77
R + VA + D
Sbjct: 326 ----SRSYVYAVAKDCD 338
Score = 34.7 bits (78), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 50 LNETQQEFQALARKFCREEIIPVAAEHDRTGEYP 83
L++TQ++F+ KF +E I P A + DRT +P
Sbjct: 34 LDDTQKQFKESVAKFAQENIAPYAEKIDRTNSFP 67
>sp|Q9DBL1|ACDSB_MOUSE Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadsb PE=1 SV=1
Length = 432
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
I E MG RAS T +TFE+V+VP+ N+L G G+K A+ + ++ R +AA +GL
Sbjct: 245 QIGKRENKMGIRASSTCQLTFENVKVPETNILGKIGHGYKYAIGSLNEGRIGIAAQMLGL 304
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVS 194
AQ C D Y ER FG I QG+ ++ V+
Sbjct: 305 AQGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAQVA 340
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 27/100 (27%)
Query: 219 GGLELSVFDGCLVAEELAYGCTGI---------------------------MTALEASGL 251
GG E S F LV EELA + + L L
Sbjct: 112 GGTEASFFCSVLVIEELAKVDASVALLCDIQNTIINNLFRKHASEEQKATYLPKLVTEKL 171
Query: 252 GAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNG 291
G++C++E GAGSD +KT+A K G+ ++LNG KMWI++
Sbjct: 172 GSFCLSEAGAGSDSFAMKTRADKSGNYYVLNGSKMWISHA 211
>sp|P70584|ACDSB_RAT Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadsb PE=1 SV=1
Length = 432
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
I E MG RAS T +TFE+V+VP+ +VL G G+K A+ + ++ R +AA +GL
Sbjct: 245 QIGRRENKMGIRASSTCQLTFENVKVPETSVLGKIGHGYKYAIGSLNEGRIGIAAQMLGL 304
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVS 194
AQ C D Y ER FG I QG+ ++ +V+
Sbjct: 305 AQGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAHVA 340
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNG 291
LG++C++E GAGSD +KT+A K G+ +++NG KMWI+N
Sbjct: 171 LGSFCLSEAGAGSDSFALKTRADKSGNYYVINGSKMWISNA 211
>sp|P46703|ACDP_MYCLE Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae
(strain TN) GN=fadE25 PE=3 SV=1
Length = 389
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%)
Query: 100 IPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLA 159
I E+ +G + S T + F+ R+P + ++ G GFK A+ T D TRP + A AVG+A
Sbjct: 204 IGPKEKKLGIKGSPTTELYFDKCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIA 263
Query: 160 QRCLDEATKYALERKAFGVPIAAHQGMYLKI 190
Q LD A Y +RK FG I+ Q + +
Sbjct: 264 QGALDAAIVYTKDRKQFGESISTFQSIQFML 294
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 242 IMTALEASG-LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANW 296
++ +L A G + +Y ++E AGSD ++T+A GD+WILNG K WITNGG + W
Sbjct: 119 VLPSLAAEGAMASYALSEREAGSDAASMRTRAKADGDDWILNGFKCWITNGGKSTW 174
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQA 59
+ T D TRP + A AVG+AQ LD A Y +RK FG I+ Q L + + +A
Sbjct: 245 LATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQFMLADMAMKVEA 303
>sp|Q9SWG0|IVD_ARATH Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana
GN=IVD PE=1 SV=2
Length = 409
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%)
Query: 85 GIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTF 144
GI E G+ +G R SDT + FE+ VP+EN+L EG G + M
Sbjct: 208 GITAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCFVPEENILDKEGKGVYVLMSGL 267
Query: 145 DKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 184
D R +AAG +G+ Q CLD Y +R+ FG P+ Q
Sbjct: 268 DLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQ 307
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNG 291
+GA ++EP AGSDV G+K KA K +ILNG KMW TNG
Sbjct: 148 VGALAMSEPNAGSDVVGMKCKAEKVDGGYILNGNKMWCTNG 188
Score = 38.1 bits (87), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQV-------FYSELNET 53
M D R +AAG +G+ Q CLD Y +R+ FG P+ Q Y+ L +
Sbjct: 264 MSGLDLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSS 323
Query: 54 QQEFQALAR 62
+ ++AR
Sbjct: 324 RSYVYSVAR 332
>sp|Q9FS87|IVD2_SOLTU Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment) OS=Solanum
tuberosum GN=IVD2 PE=1 SV=1
Length = 401
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Query: 68 EIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKE 127
+ + V A+ D T GI E G+ +G R SDT + FE+ VP+E
Sbjct: 184 QTLVVYAKTDVTASSK-GITAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCFVPEE 242
Query: 128 NVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ--- 184
NVL G G + M D R +A+G VG+ Q CLD Y +R+ FG PI Q
Sbjct: 243 NVLGQVGKGVYVLMSGLDLERLVLASGPVGIMQACLDVVLPYVKQREQFGRPIGEFQFVQ 302
Query: 185 ----GMYLKIQ----YVSIFEREIQLMLLGVHNCNVFLVSVS 218
MY +Q Y+ RE + +C ++S +
Sbjct: 303 GKVADMYTSMQSSRSYLYSVARECDSGTINTKDCAGVILSAA 344
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVA 294
+GA ++EP AGSDV +K KA + ++LNG KMW TNG A
Sbjct: 140 VGALAMSEPDAGSDVVSMKCKADRVEGGYVLNGNKMWCTNGPTA 183
Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQV-------FYSELNET 53
M D R +A+G VG+ Q CLD Y +R+ FG PI Q Y+ + +
Sbjct: 256 MSGLDLERLVLASGPVGIMQACLDVVLPYVKQREQFGRPIGEFQFVQGKVADMYTSMQSS 315
Query: 54 QQEFQALARK 63
+ ++AR+
Sbjct: 316 RSYLYSVARE 325
>sp|P28330|ACADL_HUMAN Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADL PE=2 SV=2
Length = 430
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 34/152 (22%)
Query: 173 RKAFGVPIAAHQGMYLKIQYVS--IFEREIQLMLLGVHNCNVFLVSVSGGLELSVFDGCL 230
RK F + H + K VS ++E+ + LLGV+ + GG+ ++ +
Sbjct: 65 RKFFQEEVIPHHSEWEKAGEVSREVWEKAGKQGLLGVN-----IAEHLGGIGGDLYSAAI 119
Query: 231 VAEELAYG-CTG---------IMTALEASG-----------------LGAYCVTEPGAGS 263
V EE AY C+G +M+ + G +GA +TEPGAGS
Sbjct: 120 VWEEQAYSNCSGPGFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGS 179
Query: 264 DVNGVKTKAVKKGDEWILNGQKMWITNGGVAN 295
D+ G+KT A K G +WILNG K++I+NG +++
Sbjct: 180 DLQGIKTNAKKDGSDWILNGSKVFISNGSLSD 211
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 105 QNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLD 164
MG +A DT + FED+R+P +L E GF M + R +A A+ ++ +
Sbjct: 249 HKMGLKAQDTAELFFEDIRLPASALLGEENKGFYYIMKELPQERLLIADVAISASEFMFE 308
Query: 165 EATKYALERKAFGVPIAAHQGMYLKI 190
E Y +RKAFG +A Q + K+
Sbjct: 309 ETRNYVKQRKAFGKTVAHLQTVQHKL 334
>sp|P79274|ACADL_PIG Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADL PE=2 SV=1
Length = 430
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 34/152 (22%)
Query: 173 RKAFGVPIAAHQGMYLKIQYVS--IFEREIQLMLLGVHNCNVFLVSVSGGLELSVFDGCL 230
RK F + H + K VS ++E+ + LLG++ + GG+ ++ +
Sbjct: 65 RKFFQEEVIPHHAEWEKAGEVSRELWEKAGKQGLLGIN-----IAERHGGIGGDLYSAAI 119
Query: 231 VAEELAYG-CTG---------IMTALEASG-----------------LGAYCVTEPGAGS 263
V EE AY CTG +M + G +GA +TEPGAGS
Sbjct: 120 VWEEQAYSNCTGPGFSLHSDIVMPYIANYGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGS 179
Query: 264 DVNGVKTKAVKKGDEWILNGQKMWITNGGVAN 295
D+ GV+T A K G +WILNG K++ITNG +++
Sbjct: 180 DLQGVRTNAKKDGSDWILNGSKVFITNGWLSD 211
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 105 QNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLD 164
+G +A DT + FEDVR+P +L E GF M + R +A AV ++ +
Sbjct: 249 HKIGLKAQDTAELFFEDVRLPASALLGEENKGFYYLMQELPQERLLIAELAVSASEFMFE 308
Query: 165 EATKYALERKAFGVPIAAHQGMYLKI 190
E Y +RKAFG +A Q + K+
Sbjct: 309 ETRNYVKQRKAFGKTVAHIQTVQHKL 334
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 19 AQRCLDEATKYALERKAFG--VPIAAHQVFYSELNETQQEFQALARKFCREEIIPVAAEH 76
A RC + LE + I ++F SE F+ RKF +EE+IP AE
Sbjct: 24 ASRCSHSGGEERLESPSAKKLTDIGIRRIFSSE----HDIFRESVRKFFQEEVIPHHAEW 79
Query: 77 DRTGEYPWGIVKKAHELGLINGHIPASEQNMG 108
++ GE + +KA + GL+ +I +G
Sbjct: 80 EKAGEVSRELWEKAGKQGLLGINIAERHGGIG 111
>sp|Q54RR5|ACDSB_DICDI Probable short/branched chain specific acyl-CoA dehydrogenase
OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1
Length = 413
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 99 HIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGL 158
I E +G RAS T + ++ V ++L G G+KIA++ ++ R +AA +GL
Sbjct: 224 RIGKKEDKLGIRASSTCEVILDNCVVKPTDILGELGRGYKIAIEGLNEGRIGIAAQMLGL 283
Query: 159 AQRCLDEATKYALERKAFGVPIAAHQGM 186
AQ D Y +ERK FG PIA QGM
Sbjct: 284 AQGVFDSTIPYLMERKQFGKPIATFQGM 311
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 243 MTALEASGLGAYCVTEPGAGSDVNGVKTKAVKKGD-EWILNGQKMWITN 290
++ L + +G++C++E G+GSD + T+AV++ D ++LNG K WITN
Sbjct: 141 LSMLATNTVGSFCLSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITN 189
Score = 38.1 bits (87), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 1 MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 44
++ ++ R +AA +GLAQ D Y +ERK FG PIA Q
Sbjct: 266 IEGLNEGRIGIAAQMLGLAQGVFDSTIPYLMERKQFGKPIATFQ 309
>sp|Q20772|GCDH_CAEEL Probable glutaryl-CoA dehydrogenase, mitochondrial
OS=Caenorhabditis elegans GN=F54D5.7 PE=1 SV=1
Length = 409
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 92 ELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPV 151
E G+ P E + RAS T I +DV VP+EN LL G + + R +
Sbjct: 213 ERGMKGLTTPKIEGKLSLRASITGQIAMDDVPVPEEN-LLPNAEGLQGPFGCLNNARLGI 271
Query: 152 AAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKI 190
A GA+G A+ C A +Y L+R+ FG P+A +Q M LK+
Sbjct: 272 AWGALGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKM 310
Score = 38.5 bits (88), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 4 FDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEF 57
+ R +A GA+G A+ C A +Y L+R+ FG P+A +Q+ ++ + E
Sbjct: 264 LNNARLGIAWGALGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKMADMLTEI 317
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 248 ASG--LGAYCVTEPGAGSDVNGVKTKAV--KKGDEWILNGQKMWITNGGVAN 295
ASG +G + +TEP GS+ G++TKA + + LNG K WI+N V++
Sbjct: 141 ASGKKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLNGSKTWISNSPVSD 192
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 49 ELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLI 96
+L E ++ AR++C+E ++P E RT ++ ++ + +GL+
Sbjct: 31 QLTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLL 78
>sp|Q54IM8|ACAD8_DICDI Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=acad8 PE=3 SV=1
Length = 416
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E+ +G TR + FED RVP N++ EG GF IAM+ + R + A ++G AQ CL
Sbjct: 232 EEKLGWNTQPTRALIFEDCRVPVGNLIGKEGQGFSIAMNALNGGRINIGACSLGGAQSCL 291
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKI 190
A + RK F P+ Q + K+
Sbjct: 292 VAARDHVKVRKQFNQPLEHFQAVQFKM 318
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGG 292
+ +YC+TEPG+GSD + TKA K GD +ILNG K +I+ GG
Sbjct: 153 IASYCLTEPGSGSDAGSLSTKATKDGDHYILNGSKAFISGGG 194
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 20 QRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQALARKFCREEIIPVAAEHDRT 79
Q L ATK L+R+ F + V L E Q++FQ++A F +E++ P A + D+
Sbjct: 12 QSVLQNATKLVLQRRTFFNIVPNPSV---GLTEDQKQFQSMALDFAQEKMKPFAEKWDKE 68
Query: 80 GEYPWGIVKKAHELGL 95
+P ++++A ELG
Sbjct: 69 EYFPRDVMREAAELGF 84
>sp|P51174|ACADL_MOUSE Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acadl PE=2 SV=2
Length = 430
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 34/152 (22%)
Query: 173 RKAFGVPIAAHQGMYLKIQYVS--IFEREIQLMLLGVHNCNVFLVSVSGGLELSVFDGCL 230
RK F + H + K VS ++E+ + LLG++ + GG+ + +
Sbjct: 65 RKFFQEEVIPHHTEWEKAGEVSREVWEKAGKQGLLGIN-----IAEKHGGIGGDLLSTAV 119
Query: 231 VAEELAYG-CTG---------IMTALEASG-----------------LGAYCVTEPGAGS 263
EE AY CTG +M + G +GA +TEPGAGS
Sbjct: 120 TWEEQAYSNCTGPGFSLHSDIVMPYIANYGTKEQIEKFIPQMTAGKCIGAIAMTEPGAGS 179
Query: 264 DVNGVKTKAVKKGDEWILNGQKMWITNGGVAN 295
D+ GV+T A + G +WILNG K++ITNG +++
Sbjct: 180 DLQGVRTNAKRSGSDWILNGSKVFITNGWLSD 211
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 105 QNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLD 164
MG +A DT + FEDVR+P +L E GF M + R +A A+ + +
Sbjct: 249 HKMGMKAQDTAELFFEDVRLPANALLGEENKGFYYLMQELPQERLLIAELAISACEFMFE 308
Query: 165 EATKYALERKAFGVPIAAHQGMYLKI 190
E Y +RKAFG +A Q + K+
Sbjct: 309 ETRNYVKQRKAFGKTVAHIQTVQHKL 334
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 8 RPPVAAGAVGLAQRCLDEATKYALERKAFG--VPIAAHQVFYSELNETQQEFQALARKFC 65
RPP +A RC + LE + + ++F SE F+ RKF
Sbjct: 20 RPPPSA-------RCSHSGAEARLETPSAKKLTDVGIRRIFSSE----HDIFRESVRKFF 68
Query: 66 REEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFED 121
+EE+IP E ++ GE + +KA + GL+ +I +G T +T+E+
Sbjct: 69 QEEVIPHHTEWEKAGEVSREVWEKAGKQGLLGINIAEKHGGIGGDLLST-AVTWEE 123
>sp|P15650|ACADL_RAT Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=Acadl PE=1 SV=1
Length = 430
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVAN 295
+GA +TEPGAGSD+ GV+T A + G +WILNG K++ITNG +++
Sbjct: 167 IGAIAMTEPGAGSDLQGVRTNAKRSGSDWILNGSKVFITNGWLSD 211
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 105 QNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLD 164
MG +A DT + FEDVR+P +L E GF M + R +A A+ + +
Sbjct: 249 HKMGMKAQDTAELFFEDVRLPASALLGEENKGFYYLMQELPQERLLIADLAISACEFMFE 308
Query: 165 EATKYALERKAFGVPIAAHQGMYLKI 190
E Y +RKAFG +A Q + K+
Sbjct: 309 ETRNYVRQRKAFGKTVAHIQTVQHKL 334
Score = 32.3 bits (72), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 14/117 (11%)
Query: 7 TRPPVAAGAVGLAQRCLDEATKYALERKAFG--VPIAAHQVFYSELNETQQEFQALARKF 64
T PP +A RC + LE + I ++F SE F+ RKF
Sbjct: 19 TLPPPSA-------RCSHSGAEARLETPSAKKLTDIGIRRIFSSE----HDIFRESVRKF 67
Query: 65 CREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFED 121
+EE+IP E ++ GE + +KA + GL+ +I +G T +T+E+
Sbjct: 68 FQEEVIPYHEEWEKAGEVSRELWEKAGKQGLLGINIAEKHGGIGGDLLST-AVTWEE 123
>sp|P34275|IVD_CAEEL Probable acyl coa dehydrogenase 6 OS=Caenorhabditis elegans
GN=acdh-6 PE=3 SV=2
Length = 408
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%)
Query: 93 LGLINGHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVA 152
L I H +G R+SDT + FEDVRVP ++ EG GF M+ F+ R
Sbjct: 211 LDSIGVHRSTPLDKLGMRSSDTVQLFFEDVRVPSSYIIGEEGRGFAYQMNQFNDERLVTV 270
Query: 153 AGAVGLAQRCLDEATKYALERKAFGVPIAAHQ 184
A + Q+C++E +YA ER FG + Q
Sbjct: 271 AVGLLPLQKCINETIEYARERLIFGKTLLDQQ 302
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANW 296
+ + V+EP AGSDV+ ++T A + G + I+NG KMWITNG A+W
Sbjct: 142 VSSIAVSEPHAGSDVSAIRTHARRYGSDLIINGSKMWITNGDQADW 187
>sp|P81140|GCDH_PIG Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa
GN=GCDH PE=1 SV=1
Length = 408
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 101 PASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQ 160
P E RAS T I +DV VP+ENVL + + + + R ++ G +G A+
Sbjct: 218 PKIEGKFSLRASATGMIIMDDVEVPEENVL-PKASSLAVPFGCLNNARYGISWGVLGAAE 276
Query: 161 RCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML----LGVHNC 210
CL A +Y L+R FGVP+A +Q + +R++ ML LG+H C
Sbjct: 277 FCLHTARQYTLDRIQFGVPLAKNQ----------LIQRKLADMLTEITLGLHAC 320
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKK--GDEWILNGQKMWITNGGVAN----W----QNRT 300
LG + +TEP GSD ++T+A+ + LNG K WITN VA+ W N
Sbjct: 144 LGCFGLTEPNHGSDPGSMETRALHNPSNRSYTLNGAKTWITNSPVADLFVVWARCEDNCI 203
Query: 301 RDFRYEK 307
R F EK
Sbjct: 204 RGFLLEK 210
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 4 FDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEF 57
+ R ++ G +G A+ CL A +Y L+R FGVP+A +Q+ +L + E
Sbjct: 260 LNNARYGISWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQRKLADMLTEI 313
>sp|Q2KHZ9|GCDH_BOVIN Glutaryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=GCDH
PE=2 SV=1
Length = 438
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 92 ELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPV 151
E G+ P E RAS T I +DV VP+ENVL G +G + R +
Sbjct: 239 EKGMRGLSTPRIEGKFSLRASSTGMIIMDDVEVPEENVLPGV-SGLAGPFGCLNNARYGI 297
Query: 152 AAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLLGVHNC 210
G +G A+ CL A +Y L+R FGVP+A +Q + K+ + + + LG+H C
Sbjct: 298 TWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQKKLADM------LTEITLGLHAC 350
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKK--GDEWILNGQKMWITNGGVAN 295
LG + +TEP GSD +G++T+A +IL+G K WITN VA+
Sbjct: 174 LGCFGLTEPNHGSDPSGMETRARHNPSSRSYILSGSKTWITNSPVAD 220
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 4 FDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEF 57
+ R + G +G A+ CL A +Y L+R FGVP+A +Q+ +L + E
Sbjct: 290 LNNARYGITWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQKKLADMLTEI 343
>sp|P63430|Y897_MYCBO Probable acyl-CoA dehydrogenase FadE10 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadE10 PE=3 SV=1
Length = 650
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 107 MGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEA 166
MG R + VRVPK+N++ EG G KIA+ T + R + A A G+A++ L A
Sbjct: 250 MGLRGIENGVTRLHRVRVPKDNLIGREGDGLKIALTTLNAGRLSLPAIATGVAKQALKIA 309
Query: 167 TKYALERKAFGVPIAAHQGMYLKIQYVS 194
++++ER +G P+ H+ + KI +++
Sbjct: 310 REWSVERVQWGKPVGQHEAVASKISFIA 337
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 18/139 (12%)
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLLGVHNCNVFLVSVSGGLEL 223
DE K E FG+ I + G + + + +M+ VH+ S G L
Sbjct: 84 DEYVKGLAELGCFGLKIPSEYG---GLNMSQVAYNRVLMMVTTVHS--------SLGALL 132
Query: 224 SVFDGCLVAEELAYGCTG-----IMTALEASGLGAYCVTEPGAGSDVNGVKTKA--VKKG 276
S V E L T + A + A+ +TEP GSD + + A + G
Sbjct: 133 SAHQSIGVPEPLKLAGTAEQKRRFLPRCAAGAISAFLLTEPDVGSDPARMASTATPIDDG 192
Query: 277 DEWILNGQKMWITNGGVAN 295
+ L G K+W TNG VA+
Sbjct: 193 QAYELEGVKLWTTNGVVAD 211
>sp|P63429|Y873_MYCTU Probable acyl-CoA dehydrogenase FadE10 OS=Mycobacterium
tuberculosis GN=fadE10 PE=3 SV=1
Length = 650
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 107 MGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEA 166
MG R + VRVPK+N++ EG G KIA+ T + R + A A G+A++ L A
Sbjct: 250 MGLRGIENGVTRLHRVRVPKDNLIGREGDGLKIALTTLNAGRLSLPAIATGVAKQALKIA 309
Query: 167 TKYALERKAFGVPIAAHQGMYLKIQYVS 194
++++ER +G P+ H+ + KI +++
Sbjct: 310 REWSVERVQWGKPVGQHEAVASKISFIA 337
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 18/139 (12%)
Query: 164 DEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLLGVHNCNVFLVSVSGGLEL 223
DE K E FG+ I + G + + + +M+ VH+ S G L
Sbjct: 84 DEYVKGLAELGCFGLKIPSEYG---GLNMSQVAYNRVLMMVTTVHS--------SLGALL 132
Query: 224 SVFDGCLVAEELAYGCTG-----IMTALEASGLGAYCVTEPGAGSDVNGVKTKA--VKKG 276
S V E L T + A + A+ +TEP GSD + + A + G
Sbjct: 133 SAHQSIGVPEPLKLAGTAEQKRRFLPRCAAGAISAFLLTEPDVGSDPARMASTATPIDDG 192
Query: 277 DEWILNGQKMWITNGGVAN 295
+ L G K+W TNG VA+
Sbjct: 193 QAYELEGVKLWTTNGVVAD 211
>sp|Q8HXY7|ACADV_MACFA Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADVL PE=2 SV=1
Length = 655
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E+ MG +AS+T + F+ VRVP ENVL G+GFK+AM + R +AA G + +
Sbjct: 297 EKKMGIKASNTAEVLFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGII 356
Query: 164 DEATKYALERKAFGVPI 180
+A YA R FG I
Sbjct: 357 TKAVDYATNRIQFGEKI 373
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 163 LDEATKYAL-ERKAFGVPIAAHQGM--YLKIQYVSIFEREIQLMLLGVHNCNVFLVSVSG 219
++E T L E AFG+ + + G QY + E ++G+H+ V ++
Sbjct: 128 VEETTLQGLKELGAFGLQVPSELGGVGLCNTQYARLVE------IVGMHD---LAVGITL 178
Query: 220 GLELSV-FDGCLVAEELAYGCTGIMTALEASGLGAYCVTEPGAGSDVNGVKTKAVKK--G 276
G S+ F G L+ A + L A+C+TEP +GSD ++T AV G
Sbjct: 179 GAHQSIGFKGILLFGTKAQKEKYLPKLASGETLAAFCLTEPSSGSDAASIRTSAVPSPCG 238
Query: 277 DEWILNGQKMWITNGGVAN 295
+ LNG K+WI+NGG+A+
Sbjct: 239 KYYTLNGSKLWISNGGLAD 257
>sp|P50544|ACADV_MOUSE Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadvl PE=1 SV=3
Length = 656
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 144 FDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMY--LKIQYVSIFEREIQ 201
F++ P A+ ++ D+ + E AFG+ + + G QY + E
Sbjct: 114 FEEVNDPAKNDAL---EKVEDDTLQGLKELGAFGLQVPSELGGLGLSNTQYARLAE---- 166
Query: 202 LMLLGVHNCNVFLVSVSGGLELSV-FDGCLVAEELAYGCTGIMTALEASGLGAYCVTEPG 260
++G+H+ V SV+ G S+ F G L+ A + L A+C+TEP
Sbjct: 167 --IVGMHDLGV---SVTLGAHQSIGFKGILLYGTKAQREKYLPRVASGQALAAFCLTEPS 221
Query: 261 AGSDVNGVKTKAVKK--GDEWILNGQKMWITNGGVAN 295
+GSDV +++ A+ G + LNG K+WI+NGG+A+
Sbjct: 222 SGSDVASIRSSAIPSPCGKYYTLNGSKIWISNGGLAD 258
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E+ MG +AS+T + F+ V+VP ENVL G GFK+A++ + R +AA G + +
Sbjct: 298 EKKMGIKASNTSEVYFDGVKVPSENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKSLI 357
Query: 164 DEATKYALERKAFGVPI 180
+A +A R FG I
Sbjct: 358 AKAVDHATNRTQFGDKI 374
>sp|P45953|ACADV_RAT Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadvl PE=1 SV=1
Length = 655
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 172 ERKAFGVPIAAHQGMY--LKIQYVSIFEREIQLMLLGVHNCNVFLVSVSGGLELSV-FDG 228
E AFG+ + + G QY + E ++G+H+ V SV+ G S+ F G
Sbjct: 138 ELGAFGLQVPSELGGLGLSNTQYARLAE------IVGMHDLGV---SVTLGAHQSIGFKG 188
Query: 229 CLVAEELAYGCTGIMTALEASGLGAYCVTEPGAGSDVNGVKTKAVKK--GDEWILNGQKM 286
L+ A + L A+C+TEP +GSDV +++ AV G + LNG K+
Sbjct: 189 ILLYGTKAQKEKYLPRVASGQALAAFCLTEPSSGSDVASIRSSAVPSPCGKYYTLNGSKI 248
Query: 287 WITNGGVAN 295
WI+NGG+A+
Sbjct: 249 WISNGGLAD 257
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 104 EQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCL 163
E+ MG +AS+T + F+ V+VP ENVL G GFK+A++ + R +AA G + +
Sbjct: 297 EKKMGIKASNTSEVYFDGVKVPAENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKAII 356
Query: 164 DEATKYALERKAFGVPI 180
+A +A R FG I
Sbjct: 357 AKAVDHATNRTQFGDKI 373
>sp|Q9JHI5|IVD_MOUSE Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd
PE=1 SV=1
Length = 424
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%)
Query: 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNG 291
+GA ++EP AGSDV +K KA KKGD ++LNG K WITNG
Sbjct: 160 IGALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNG 200
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 68 EIIPVAAEHDRTG-EYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPK 126
+I+ V A+ D T GI E G+ +G R S+T + FED +VP
Sbjct: 204 DILVVYAKTDLTAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPA 263
Query: 127 ENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGM 186
NVL E G + M D R +A G +G+ Q LD Y R+AFG I Q M
Sbjct: 264 ANVLSQESKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLM 323
Query: 187 YLKI 190
K+
Sbjct: 324 QGKM 327
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,255,261
Number of Sequences: 539616
Number of extensions: 5009573
Number of successful extensions: 11355
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 10803
Number of HSP's gapped (non-prelim): 563
length of query: 312
length of database: 191,569,459
effective HSP length: 117
effective length of query: 195
effective length of database: 128,434,387
effective search space: 25044705465
effective search space used: 25044705465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)