Query psy10338
Match_columns 312
No_of_seqs 372 out of 2201
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 15:25:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10338.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10338hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfd_A Acyl-COA dehydrogenase; 99.9 2E-27 6.9E-32 221.1 15.1 148 44-305 13-187 (393)
2 3ii9_A Glutaryl-COA dehydrogen 99.9 6.8E-27 2.3E-31 217.8 14.7 151 40-304 9-187 (396)
3 1rx0_A Acyl-COA dehydrogenase 99.9 1.7E-26 5.7E-31 214.9 16.7 153 38-304 7-186 (393)
4 3p4t_A Putative acyl-COA dehyd 99.9 1.7E-26 5.8E-31 215.6 16.6 149 43-305 19-196 (403)
5 2d29_A Acyl-COA dehydrogenase; 99.9 1.8E-26 6.1E-31 214.3 16.2 147 46-306 3-177 (387)
6 2vig_A Short-chain specific ac 99.9 1.8E-26 6.2E-31 214.5 16.1 148 45-306 1-176 (391)
7 1ukw_A Acyl-COA dehydrogenase; 99.9 1.9E-26 6.5E-31 213.5 15.7 146 46-305 1-173 (379)
8 3nf4_A Acyl-COA dehydrogenase; 99.9 2.2E-26 7.6E-31 213.7 15.9 146 45-304 11-183 (387)
9 1buc_A Butyryl-COA dehydrogena 99.9 3.6E-26 1.2E-30 211.9 15.4 147 46-306 1-179 (383)
10 1egd_A Medium chain acyl-COA d 99.9 5E-26 1.7E-30 211.9 15.3 148 45-306 11-185 (396)
11 2jif_A Short/branched chain sp 99.9 8.7E-26 3E-30 210.8 16.6 146 45-305 24-197 (404)
12 2pg0_A Acyl-COA dehydrogenase; 99.9 1E-25 3.5E-30 209.1 16.6 147 46-306 5-179 (385)
13 3mpi_A Glutaryl-COA dehydrogen 99.9 4.9E-26 1.7E-30 212.0 13.5 146 46-305 1-177 (397)
14 3sf6_A Glutaryl-COA dehydrogen 99.9 8.3E-26 2.9E-30 210.9 15.1 146 44-304 24-198 (403)
15 3r7k_A Probable acyl COA dehyd 99.9 9.4E-26 3.2E-30 210.5 15.3 146 46-305 25-199 (403)
16 2eba_A Putative glutaryl-COA d 99.9 6.8E-26 2.3E-30 210.2 14.0 146 45-304 6-180 (385)
17 4hr3_A Putative acyl-COA dehyd 99.9 1.1E-25 3.8E-30 210.8 13.4 149 45-307 4-202 (415)
18 3swo_A Glutaryl-COA dehydrogen 99.9 1.4E-25 4.7E-30 209.1 13.9 145 45-304 21-193 (399)
19 2ix5_A Acyl-coenzyme A oxidase 99.9 1.6E-25 5.6E-30 210.8 14.4 144 46-304 51-222 (436)
20 1ivh_A Isovaleryl-COA dehydrog 99.9 2.3E-25 7.9E-30 207.3 15.1 145 48-306 11-185 (394)
21 2dvl_A Acyl-COA dehydrogenase; 99.9 2.7E-25 9.4E-30 205.3 15.4 143 48-304 1-171 (372)
22 1siq_A GCD, glutaryl-COA dehyd 99.9 1.1E-24 3.8E-29 202.5 14.0 145 45-304 9-183 (392)
23 3mkh_A Nitroalkane oxidase; ox 99.9 2E-24 7E-29 203.6 12.2 146 45-304 2-192 (438)
24 3owa_A Acyl-COA dehydrogenase; 99.9 9E-24 3.1E-28 205.6 13.8 144 48-305 31-204 (597)
25 2c12_A Nitroalkane oxidase; ox 99.9 1.1E-23 3.9E-28 198.5 14.1 145 45-303 1-190 (439)
26 1r2j_A Protein FKBI; polyketid 99.9 8.3E-23 2.8E-27 188.2 12.1 132 59-305 2-160 (366)
27 2z1q_A Acyl-COA dehydrogenase; 99.9 2.9E-22 1E-26 194.7 14.4 141 49-304 27-198 (577)
28 2wbi_A Acyl-COA dehydrogenase 99.9 1.4E-22 4.7E-27 190.5 9.9 62 245-306 143-207 (428)
29 2uxw_A VERY-long-chain specifi 99.9 4.5E-21 1.6E-25 187.0 16.1 140 49-304 45-218 (607)
30 3m9v_A FAD-dependent oxidoredu 99.9 2.1E-21 7.2E-26 183.0 12.1 143 44-306 14-190 (439)
31 3mxl_A Nitrososynthase; flavin 99.8 3.9E-21 1.3E-25 178.7 10.5 140 46-305 5-178 (395)
32 2or0_A Hydroxylase; APC7385, r 99.8 6.3E-21 2.1E-25 178.4 11.8 134 46-304 14-171 (414)
33 2jbr_A P-hydroxyphenylacetate 99.8 4.2E-19 1.5E-23 166.4 12.2 130 48-304 33-186 (422)
34 2rfq_A 3-HSA hydroxylase, oxyg 99.8 1.1E-18 3.9E-23 162.0 12.7 123 56-303 11-157 (394)
35 1w07_A Acyl-COA oxidase; oxido 99.5 8.4E-15 2.9E-19 144.2 5.3 61 244-304 125-193 (659)
36 2d29_A Acyl-COA dehydrogenase; 99.5 5.3E-14 1.8E-18 130.2 8.3 100 98-197 199-298 (387)
37 2jif_A Short/branched chain sp 99.5 5.8E-14 2E-18 130.7 8.4 95 103-197 221-315 (404)
38 1ukw_A Acyl-COA dehydrogenase; 99.5 5.7E-14 1.9E-18 129.7 8.2 95 103-197 197-291 (379)
39 2dvl_A Acyl-COA dehydrogenase; 99.5 6.3E-14 2.2E-18 129.0 8.5 95 103-197 191-285 (372)
40 2pg0_A Acyl-COA dehydrogenase; 99.5 6.4E-14 2.2E-18 129.6 8.5 96 102-197 203-298 (385)
41 3pfd_A Acyl-COA dehydrogenase; 99.5 5.6E-14 1.9E-18 130.3 7.7 95 103-197 211-305 (393)
42 2vig_A Short-chain specific ac 99.5 7.3E-14 2.5E-18 129.5 8.4 95 102-196 198-292 (391)
43 1buc_A Butyryl-COA dehydrogena 99.5 6.1E-14 2.1E-18 129.6 7.8 94 103-196 202-295 (383)
44 1egd_A Medium chain acyl-COA d 99.5 6.8E-14 2.3E-18 129.9 7.9 100 98-197 206-305 (396)
45 3r7k_A Probable acyl COA dehyd 99.5 6.3E-14 2.1E-18 130.4 7.3 95 103-197 222-316 (403)
46 2z1q_A Acyl-COA dehydrogenase; 99.5 1.3E-13 4.3E-18 134.0 9.6 93 103-195 219-311 (577)
47 3owa_A Acyl-COA dehydrogenase; 99.5 8.5E-14 2.9E-18 135.4 8.4 93 103-195 224-316 (597)
48 1rx0_A Acyl-COA dehydrogenase 99.5 9.9E-14 3.4E-18 128.7 8.4 100 98-197 205-304 (393)
49 3p4t_A Putative acyl-COA dehyd 99.5 7.5E-14 2.6E-18 129.9 7.3 95 103-197 219-313 (403)
50 1ivh_A Isovaleryl-COA dehydrog 99.4 8.4E-14 2.9E-18 129.2 7.4 96 102-197 209-304 (394)
51 4hr3_A Putative acyl-COA dehyd 99.4 8.1E-14 2.8E-18 130.2 7.1 95 103-197 225-321 (415)
52 3nf4_A Acyl-COA dehydrogenase; 99.4 1.3E-13 4.3E-18 127.7 8.3 95 103-197 206-300 (387)
53 1r2j_A Protein FKBI; polyketid 99.4 5.9E-14 2E-18 129.0 5.5 95 103-197 180-275 (366)
54 2uxw_A VERY-long-chain specifi 99.4 1.7E-13 6E-18 133.5 8.5 94 103-196 248-341 (607)
55 3swo_A Glutaryl-COA dehydrogen 99.4 1.9E-13 6.6E-18 126.9 8.0 93 103-196 213-305 (399)
56 3mpi_A Glutaryl-COA dehydrogen 99.4 1.9E-13 6.4E-18 126.9 7.7 95 103-197 201-295 (397)
57 3mkh_A Nitroalkane oxidase; ox 99.4 2.9E-13 1E-17 127.2 9.1 94 103-196 229-323 (438)
58 2wbi_A Acyl-COA dehydrogenase 99.4 1.4E-13 4.9E-18 129.0 6.9 93 103-195 232-327 (428)
59 3ii9_A Glutaryl-COA dehydrogen 99.4 4.1E-13 1.4E-17 124.6 8.8 94 102-196 210-303 (396)
60 2eba_A Putative glutaryl-COA d 99.4 3.4E-13 1.2E-17 124.7 8.1 93 103-196 201-293 (385)
61 3sf6_A Glutaryl-COA dehydrogen 99.4 2.7E-13 9.3E-18 126.1 7.5 93 103-196 218-310 (403)
62 3djl_A Protein AIDB; alpha hel 99.4 3.7E-13 1.3E-17 129.4 7.8 105 198-303 89-231 (541)
63 2ix5_A Acyl-coenzyme A oxidase 99.4 4.8E-13 1.7E-17 125.6 7.6 92 103-195 244-335 (436)
64 1siq_A GCD, glutaryl-COA dehyd 99.4 8.3E-13 2.8E-17 122.4 8.7 92 103-195 204-295 (392)
65 2c12_A Nitroalkane oxidase; ox 99.4 5.9E-13 2E-17 125.2 7.5 101 97-197 225-327 (439)
66 2jbr_A P-hydroxyphenylacetate 99.3 2.1E-12 7.2E-17 120.8 4.1 94 103-196 209-317 (422)
67 2rfq_A 3-HSA hydroxylase, oxyg 99.2 5E-12 1.7E-16 117.1 4.9 94 103-196 181-289 (394)
68 2or0_A Hydroxylase; APC7385, r 99.2 3.1E-12 1.1E-16 119.3 3.5 94 102-195 197-303 (414)
69 2ddh_A Acyl-COA oxidase; beta 99.1 7.1E-11 2.4E-15 116.2 7.6 92 103-194 226-335 (661)
70 3djl_A Protein AIDB; alpha hel 99.1 8.7E-11 3E-15 112.9 7.0 90 103-195 257-346 (541)
71 1w07_A Acyl-COA oxidase; oxido 99.1 5.9E-11 2E-15 116.8 4.9 91 103-193 225-337 (659)
72 3mxl_A Nitrososynthase; flavin 99.0 3.1E-10 1E-14 105.0 7.5 90 103-197 202-293 (395)
73 2yyk_A 4-hydroxyphenylacetate- 99.0 4.8E-10 1.6E-14 106.3 8.5 58 245-304 133-199 (481)
74 2ddh_A Acyl-COA oxidase; beta 99.0 1.8E-09 6.1E-14 106.2 12.4 57 248-304 130-194 (661)
75 1u8v_A Gamma-aminobutyrate met 99.0 4.9E-10 1.7E-14 106.4 7.4 60 244-304 137-205 (490)
76 3m9v_A FAD-dependent oxidoredu 99.0 8.8E-10 3E-14 103.5 7.7 87 103-194 213-301 (439)
77 3hwc_A Chlorophenol-4-monooxyg 98.9 1.7E-09 5.8E-14 102.8 7.7 59 244-304 141-207 (515)
78 2yyk_A 4-hydroxyphenylacetate- 98.4 2.3E-07 8E-12 87.8 6.6 90 108-202 240-334 (481)
79 1u8v_A Gamma-aminobutyrate met 98.1 4.3E-06 1.5E-10 79.3 7.3 84 112-200 255-340 (490)
80 4g5e_A 2,4,6-trichlorophenol 4 98.0 1.6E-05 5.5E-10 75.6 9.4 83 114-201 254-338 (517)
81 3hwc_A Chlorophenol-4-monooxyg 97.9 1.3E-05 4.5E-10 76.1 6.8 82 114-200 253-336 (515)
82 4g5e_A 2,4,6-trichlorophenol 4 97.6 4E-05 1.4E-09 72.9 4.7 59 250-310 148-214 (517)
83 3hhg_A Transcriptional regulat 26.9 77 0.0026 26.2 4.9 61 5-67 16-76 (306)
84 1ixc_A CBNR, LYSR-type regulat 23.0 1E+02 0.0035 25.2 4.9 60 5-66 14-73 (294)
85 3szp_A Transcriptional regulat 20.8 74 0.0025 25.9 3.6 61 5-67 14-74 (291)
86 3fxq_A LYSR type regulator of 20.7 86 0.0029 26.0 4.0 61 5-67 15-75 (305)
No 1
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=99.95 E-value=2e-27 Score=221.13 Aligned_cols=148 Identities=30% Similarity=0.491 Sum_probs=128.7
Q ss_pred cccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEccee
Q psy10338 44 QVFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVR 123 (312)
Q Consensus 44 ~~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~ 123 (312)
.+|+|.++++|++|++.+++|+++++.|...++|+.+.+|+++|++|.+.||+++.+|+
T Consensus 13 ~~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~--------------------- 71 (393)
T 3pfd_A 13 SFELFQLPEEHIALREAIRALAEKEIAPYAAEVDEKARFPEEALAALNSSGFSAIHVPE--------------------- 71 (393)
T ss_dssp ---------CHHHHHHHHHHHHHHHTGGGHHHHHHTTCCCHHHHHHHHHHTCSCTTSCG---------------------
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHhCchHHHHHhhhCCCCHHHHHHHHHCCCCCCCCCh---------------------
Confidence 46899999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHH
Q psy10338 124 VPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLM 203 (312)
Q Consensus 124 Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~ 203 (312)
T Consensus 72 -------------------------------------------------------------------------------- 71 (393)
T 3pfd_A 72 -------------------------------------------------------------------------------- 71 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh---------------------------hcccceeee
Q psy10338 204 LLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE---------------------------ASGLGAYCV 256 (312)
Q Consensus 204 ~~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~---------------------------g~~~~~~a~ 256 (312)
+|||.|++..+++.++|+++++|.+++++.. |+.++++++
T Consensus 72 -------------~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~ 138 (393)
T 3pfd_A 72 -------------EYGGQGADSVATCIVIEEVARVDCSASLIPAVNKLGTMGLILRGSEELKKQVLPAVASGEAMASYAL 138 (393)
T ss_dssp -------------GGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEEC
T ss_pred -------------hHCCCCCCHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEE
Confidence 7899999999999999999999998876432 445679999
Q ss_pred cCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCC
Q psy10338 257 TEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRY 305 (312)
Q Consensus 257 tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~ 305 (312)
|||++|||+.+++|+|++++|||+|||+|.|+||+.+|||++|++.+++
T Consensus 139 tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~ 187 (393)
T 3pfd_A 139 SEREAGSDAASMRTRAVADGDDWILNGSKCWITNGGKSTWYTVMAVTDP 187 (393)
T ss_dssp CBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESCG
T ss_pred cCCCCCCCcccCeeEEEEcCCEEEEeeEEEEecCCcccCEEEEEEEeCC
Confidence 9999999999999999999999999999999999999999999976654
No 2
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=99.94 E-value=6.8e-27 Score=217.75 Aligned_cols=151 Identities=25% Similarity=0.355 Sum_probs=130.5
Q ss_pred cccccccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEE
Q psy10338 40 IAAHQVFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITF 119 (312)
Q Consensus 40 ~~~~~~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f 119 (312)
...+..|+|.+++||++|++.+++|+++++.|...+.|+.+.+|+++|++|.+.||+++.+|+
T Consensus 9 ~~~~~~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~----------------- 71 (396)
T 3ii9_A 9 WDDPLLLDQQLADDERMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTIPE----------------- 71 (396)
T ss_dssp TTSTTCGGGGSCHHHHHHHHHHHHHCCCCCHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTSCG-----------------
T ss_pred CCcccccCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHhCCCCCCCCCh-----------------
Confidence 344567999999999999999999999999999999999999999999999999999999998
Q ss_pred cceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHH
Q psy10338 120 EDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFERE 199 (312)
Q Consensus 120 ~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~ 199 (312)
T Consensus 72 -------------------------------------------------------------------------------- 71 (396)
T 3ii9_A 72 -------------------------------------------------------------------------------- 71 (396)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh----------------------------hccc
Q psy10338 200 IQLMLLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE----------------------------ASGL 251 (312)
Q Consensus 200 ~~~~~~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~----------------------------g~~~ 251 (312)
+|||.|++..+...++|+++++|.++++.+. |+.+
T Consensus 72 -----------------~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~ 134 (396)
T 3ii9_A 72 -----------------QYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWI 134 (396)
T ss_dssp -----------------GGTSCCCCHHHHHHHHHHHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSC
T ss_pred -----------------hhCCCCCCHHHHHHHHHHHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCee
Confidence 7799999999999999999999988664332 4445
Q ss_pred ceeeecCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 252 GAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 252 ~~~a~tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
+++++|||++|||+.+++|+|++++|||+|||+|.||||+.+|||++|++.++
T Consensus 135 ~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~ 187 (396)
T 3ii9_A 135 GCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLD 187 (396)
T ss_dssp EEEECCCCC------CCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEEE
T ss_pred eEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEEeECCCccCCEEEEEEEec
Confidence 69999999999999999999999999999999999999999999999996553
No 3
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.94 E-value=1.7e-26 Score=214.92 Aligned_cols=153 Identities=34% Similarity=0.503 Sum_probs=134.7
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccE
Q psy10338 38 VPIAAHQVFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGI 117 (312)
Q Consensus 38 ~p~~~~~~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v 117 (312)
.++..+..|+|.+++||+++++.+++|+++++.|...++|..+.+|+++|++|.+.||+++.+|+
T Consensus 7 ~~~~~~~~~~~~~~~e~~~~~~~~r~~~~~~~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~--------------- 71 (393)
T 1rx0_A 7 RSLTSCIDPSMGLNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQT--------------- 71 (393)
T ss_dssp ---CCTTCTTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCHHHHHHHHHTTCSSTTSCG---------------
T ss_pred CCcccCCcCCCCCCHHHHHHHHHHHHHHHHhCCccHHHHhhcCCCCHHHHHHHHhCCCCcCCCCh---------------
Confidence 33444555788999999999999999999999999888999999999999999999999999998
Q ss_pred EEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHH
Q psy10338 118 TFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFE 197 (312)
Q Consensus 118 ~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~ 197 (312)
T Consensus 72 -------------------------------------------------------------------------------- 71 (393)
T 1rx0_A 72 -------------------------------------------------------------------------------- 71 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh---------------------------hcc
Q psy10338 198 REIQLMLLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE---------------------------ASG 250 (312)
Q Consensus 198 ~~~~~~~~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~---------------------------g~~ 250 (312)
+|||.|++..+.+.++|+++++|.++++.+. |+.
T Consensus 72 -------------------e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~G~~ 132 (393)
T 1rx0_A 72 -------------------DVGGSGLSRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEK 132 (393)
T ss_dssp -------------------GGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSS
T ss_pred -------------------hhCCCCCCHHHHHHHHHHHHHhCcchhHHHHHhHHHHHHHHHHCCHHHHHHHHHHHhCCCc
Confidence 7799999999999999999999987664322 445
Q ss_pred cceeeecCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 251 LGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 251 ~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
++++++|||++|||+.+++|+|++++|||+|||+|.||||+.+||+++|+++++
T Consensus 133 ~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~ 186 (393)
T 1rx0_A 133 FASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTG 186 (393)
T ss_dssp CEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESS
T ss_pred eEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEeecCCccCCEEEEEEEcC
Confidence 679999999999999999999999999999999999999999999999997654
No 4
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=99.94 E-value=1.7e-26 Score=215.56 Aligned_cols=149 Identities=30% Similarity=0.463 Sum_probs=133.3
Q ss_pred ccccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcce
Q psy10338 43 HQVFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDV 122 (312)
Q Consensus 43 ~~~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv 122 (312)
+..|++.++++|+++++.+++|+++++.|...++|+.+.+|+++|++|.+.||+++.+|+
T Consensus 19 ~~~M~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~-------------------- 78 (403)
T 3p4t_A 19 PGSMSIWTTAEREALRKTVRAFAEREVLPHAHEWERAGEIPRELHRKAAELGLLGAGFPE-------------------- 78 (403)
T ss_dssp ----CTTSSHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCTTBTSCG--------------------
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCcCCCCh--------------------
Confidence 456999999999999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHH
Q psy10338 123 RVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQL 202 (312)
Q Consensus 123 ~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~ 202 (312)
T Consensus 79 -------------------------------------------------------------------------------- 78 (403)
T 3p4t_A 79 -------------------------------------------------------------------------------- 78 (403)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcccccccccccccCCCChhHhHHHHHHHHHHccCcch-HHHhh----------------------------hcccce
Q psy10338 203 MLLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGI-MTALE----------------------------ASGLGA 253 (312)
Q Consensus 203 ~~~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~-~~~~~----------------------------g~~~~~ 253 (312)
+|||.|++..+.+.++|+++++|.++ ++... |+.+++
T Consensus 79 --------------e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~ 144 (403)
T 3p4t_A 79 --------------DAGGSGGDGADPVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGA 144 (403)
T ss_dssp --------------GGTCCBCCTHHHHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEE
T ss_pred --------------hhCCCCCCHHHHHHHHHHHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEE
Confidence 77999999999999999999999887 43211 445669
Q ss_pred eeecCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCC
Q psy10338 254 YCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRY 305 (312)
Q Consensus 254 ~a~tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~ 305 (312)
+++|||++|||+.+++|+|++++|||+|||+|.||||+.+||+++|++.+++
T Consensus 145 ~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~ 196 (403)
T 3p4t_A 145 LAITEPGGGSDVGHLRTRADLDGDHYVINGAKTYITSGVRADYVVTAARTGG 196 (403)
T ss_dssp EECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSS
T ss_pred EEecCCCCCCCcccceEEEEEeCCEEEEEEEEEEecCCcccCEEEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999976654
No 5
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=99.94 E-value=1.8e-26 Score=214.31 Aligned_cols=147 Identities=35% Similarity=0.530 Sum_probs=133.0
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecC
Q psy10338 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVP 125 (312)
Q Consensus 46 m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp 125 (312)
|+|.++++|+++++.+++|+++++.|...++|+.+.+|+++|++|.+.||+++.+|+
T Consensus 3 m~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~----------------------- 59 (387)
T 2d29_A 3 LWFEEGAEERQVLGPFREFLKAEVAPGAAERDRTGAFPWDLVRKLAEFGVFGALVPE----------------------- 59 (387)
T ss_dssp CTTSCCHHHHHHHHHHHHHHHHHTGGGHHHHHHHCCCCHHHHHHHHTTTGGGSSSCG-----------------------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCCh-----------------------
Confidence 899999999999999999999999998888999999999999999999999999998
Q ss_pred CCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHh
Q psy10338 126 KENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLL 205 (312)
Q Consensus 126 ~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~ 205 (312)
T Consensus 60 -------------------------------------------------------------------------------- 59 (387)
T 2d29_A 60 -------------------------------------------------------------------------------- 59 (387)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh----------------------------hcccceeeec
Q psy10338 206 GVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE----------------------------ASGLGAYCVT 257 (312)
Q Consensus 206 ~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~----------------------------g~~~~~~a~t 257 (312)
+|||.|+++.+.+.++|++++.|+++++.+. |+.+.++++|
T Consensus 60 -----------~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~t 128 (387)
T 2d29_A 60 -----------AYGGAGLSTRLFARMVEAIAYYDGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLT 128 (387)
T ss_dssp -----------GGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECC
T ss_pred -----------hhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeC
Confidence 6799999999999999999999888775321 3345699999
Q ss_pred CCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCCC
Q psy10338 258 EPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRYE 306 (312)
Q Consensus 258 Ep~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~~ 306 (312)
||++|||+.+++|+|++++|||+|||+|.||||+.+|||++|++.++++
T Consensus 129 Ep~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 177 (387)
T 2d29_A 129 EPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMARTDPP 177 (387)
T ss_dssp BTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSCC
T ss_pred CCCCCCCHhhCceEEEEeCCEEEEEeEEeccCCCCcCCEEEEEEEeCCc
Confidence 9999999999999999999999999999999999999999999766533
No 6
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=99.94 E-value=1.8e-26 Score=214.53 Aligned_cols=148 Identities=32% Similarity=0.530 Sum_probs=129.0
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceec
Q psy10338 45 VFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRV 124 (312)
Q Consensus 45 ~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~V 124 (312)
+|+|.++++|+++++.+++|+++++.|.+.++|..+.+|+++|++|.+.||+++.+|+
T Consensus 1 m~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~---------------------- 58 (391)
T 2vig_A 1 MQSVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPE---------------------- 58 (391)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTTSTTSCG----------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCcccHHHHHhcCCCCHHHHHHHHHCCCCCCCCCH----------------------
Confidence 5889999999999999999999999999888999999999999999999999999998
Q ss_pred CCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHH
Q psy10338 125 PKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204 (312)
Q Consensus 125 p~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~ 204 (312)
T Consensus 59 -------------------------------------------------------------------------------- 58 (391)
T 2vig_A 59 -------------------------------------------------------------------------------- 58 (391)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh----------------------------hcccceeee
Q psy10338 205 LGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE----------------------------ASGLGAYCV 256 (312)
Q Consensus 205 ~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~----------------------------g~~~~~~a~ 256 (312)
+|||.|++..+...++|+++++|.++++.+. |+.++++++
T Consensus 59 ------------~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~ 126 (391)
T 2vig_A 59 ------------ELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFAL 126 (391)
T ss_dssp ------------GGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEEC
T ss_pred ------------hhCCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEe
Confidence 7799999999999999999999887654322 334569999
Q ss_pred cCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCCC
Q psy10338 257 TEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRYE 306 (312)
Q Consensus 257 tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~~ 306 (312)
|||++|||+.+++|+|++++|||+|||+|.||||+.+|||++|++.++++
T Consensus 127 tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 176 (391)
T 2vig_A 127 SEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRA 176 (391)
T ss_dssp CBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECCSS
T ss_pred cCCCCCCCcccceeEEEEeCCEEEEeeEEEeecCCCcCCEEEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999766543
No 7
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=99.94 E-value=1.9e-26 Score=213.54 Aligned_cols=146 Identities=45% Similarity=0.818 Sum_probs=132.9
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecC
Q psy10338 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVP 125 (312)
Q Consensus 46 m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp 125 (312)
|+|.++++|+++++.+++|+++++.|...++|..+.+|+++|++|.+.||+++.+|+
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~----------------------- 57 (379)
T 1ukw_A 1 IDFSLTEEQRQLQALARRFAKEVILPVAQEYDEKEEVPWPVIEKLHEVGLLNAIIPE----------------------- 57 (379)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTTGGGHHHHHHHTCCCHHHHHHHHHTTCTTTTSCG-----------------------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCcCCCh-----------------------
Confidence 789999999999999999999999998888999999999999999999999999998
Q ss_pred CCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHh
Q psy10338 126 KENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLL 205 (312)
Q Consensus 126 ~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~ 205 (312)
T Consensus 58 -------------------------------------------------------------------------------- 57 (379)
T 1ukw_A 58 -------------------------------------------------------------------------------- 57 (379)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh---------------------------hcccceeeecC
Q psy10338 206 GVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE---------------------------ASGLGAYCVTE 258 (312)
Q Consensus 206 ~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~---------------------------g~~~~~~a~tE 258 (312)
+|||.|+++.+...++|++++.|.++++.+. |+.++++++||
T Consensus 58 -----------~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tE 126 (379)
T 1ukw_A 58 -----------EYGGMGLKMLDEVIVGEELAYACMGIYTIPMASDLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSE 126 (379)
T ss_dssp -----------GGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCB
T ss_pred -----------hhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 7799999999999999999999988775321 34456899999
Q ss_pred CCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCC
Q psy10338 259 PGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRY 305 (312)
Q Consensus 259 p~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~ 305 (312)
|++|||+.+++|+|++++|||+|||+|.||||+.+|||++|++.+++
T Consensus 127 p~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~ 173 (379)
T 1ukw_A 127 PGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEWVVVFATVNP 173 (379)
T ss_dssp TTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTEEEEEEEEESCG
T ss_pred CCCCcChhhCeEEEEEeCCEEEEEEEEecccCCCcCCEEEEEEEcCC
Confidence 99999999999999999999999999999999999999999976653
No 8
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=99.94 E-value=2.2e-26 Score=213.66 Aligned_cols=146 Identities=26% Similarity=0.400 Sum_probs=134.3
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceec
Q psy10338 45 VFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRV 124 (312)
Q Consensus 45 ~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~V 124 (312)
.+++.++++|+++++.+++|+++++.|...++|+.+.+|+++|++|.+.||+++.+|+
T Consensus 11 ~~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~---------------------- 68 (387)
T 3nf4_A 11 VDRLLPSQEAAELIELTREIADKVLDPIVDRHEKDETYPEGVFEQLGAAGLLSLPQPE---------------------- 68 (387)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCTTHHHHHHTTTTTSTTSCG----------------------
T ss_pred cccccCCHHHHHHHHHHHHHHHHhCCccHHHHhhhCCCCHHHHHHHHHCCCCCCCCCH----------------------
Confidence 4578899999999999999999999999999999999999999999999999999998
Q ss_pred CCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHH
Q psy10338 125 PKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204 (312)
Q Consensus 125 p~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~ 204 (312)
T Consensus 69 -------------------------------------------------------------------------------- 68 (387)
T 3nf4_A 69 -------------------------------------------------------------------------------- 68 (387)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh---------------------------hcccceeeec
Q psy10338 205 LGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE---------------------------ASGLGAYCVT 257 (312)
Q Consensus 205 ~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~---------------------------g~~~~~~a~t 257 (312)
+|||.|++..+++.++|+++++|.++++... |+.++++++|
T Consensus 69 ------------~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~t 136 (387)
T 3nf4_A 69 ------------EWGGGGQPYEVYLQVLEEIAARWASVAVAVSVHSLSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLS 136 (387)
T ss_dssp ------------GGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECC
T ss_pred ------------hhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEc
Confidence 7799999999999999999999998875432 4456699999
Q ss_pred CCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 258 EPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 258 Ep~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
||++|||+.+++|+|++++|||+|||+|.||||+.+||+++|++.++
T Consensus 137 Ep~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~ 183 (387)
T 3nf4_A 137 EPQAGSDAAALRCAATPTDGGYVINGSKSWITHGGKADFYTLFARTG 183 (387)
T ss_dssp BTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECC
T ss_pred CCCCCCChhhCEEEEEEeCCEEEEEeEEecccCCcccCEEEEEEEeC
Confidence 99999999999999999999999999999999999999999997665
No 9
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=99.94 E-value=3.6e-26 Score=211.95 Aligned_cols=147 Identities=32% Similarity=0.456 Sum_probs=132.9
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecC
Q psy10338 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVP 125 (312)
Q Consensus 46 m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp 125 (312)
|+|.++++|+++++.+++|+++++.|.+.++|..+.+|+++|++|.+.||+++.+|+
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~----------------------- 57 (383)
T 1buc_A 1 MDFNLTDIQQDFLKLAHDFGEKKLAPTVTERDHKGIYDKELIDELLSLGITGAYFEE----------------------- 57 (383)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTTTTTHHHHHHHTCCCHHHHHHHHTTSGGGTTSCG-----------------------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCCh-----------------------
Confidence 789999999999999999999999999888999999999999999999999999998
Q ss_pred CCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHh
Q psy10338 126 KENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLL 205 (312)
Q Consensus 126 ~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~ 205 (312)
T Consensus 58 -------------------------------------------------------------------------------- 57 (383)
T 1buc_A 58 -------------------------------------------------------------------------------- 57 (383)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccCCCC---hhHhHHHHHHHHHHccCcchHHHhh----------------------------hccccee
Q psy10338 206 GVHNCNVFLVSVSGGLE---LSVFDGCLVAEELAYGCTGIMTALE----------------------------ASGLGAY 254 (312)
Q Consensus 206 ~~g~~~~~~p~~~GG~g---~~~~~~~~v~e~l~~~~~~~~~~~~----------------------------g~~~~~~ 254 (312)
+|||.| ++..+...++|+++++|.++++.+. |+.++++
T Consensus 58 -----------~~GG~g~~~~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~ 126 (383)
T 1buc_A 58 -----------KYGGSGDDGGDVLSYILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAF 126 (383)
T ss_dssp -----------GGTCGGGGTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEE
T ss_pred -----------hhCCCCCCCCCHHHHHHHHHHHHhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEE
Confidence 679999 9999999999999999888775322 3445699
Q ss_pred eecCCCCCCCcCCceeEEEEe-CCEEEEeeeeeeeeCCCcccEEEEEeccCCC
Q psy10338 255 CVTEPGAGSDVNGVKTKAVKK-GDEWILNGQKMWITNGGVANWQNRTRDFRYE 306 (312)
Q Consensus 255 a~tEp~~gsd~~~~~t~A~~~-~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~~ 306 (312)
++|||++|||+.+++|+|+++ +|||+|||+|.||||+.+||+++|++.++++
T Consensus 127 a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 179 (383)
T 1buc_A 127 GLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKS 179 (383)
T ss_dssp ECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEETTTTCSEEEEEEESCSS
T ss_pred EeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEeccCCCCcCCEEEEEEEeCCC
Confidence 999999999999999999999 9999999999999999999999999766543
No 10
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=99.93 E-value=5e-26 Score=211.91 Aligned_cols=148 Identities=64% Similarity=1.028 Sum_probs=133.2
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceec
Q psy10338 45 VFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRV 124 (312)
Q Consensus 45 ~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~V 124 (312)
.|+|.++++|+++++.+++|+++++.|...++|..+.+|+++|++|.+.||+++.+|+
T Consensus 11 ~m~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~---------------------- 68 (396)
T 1egd_A 11 GFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPE---------------------- 68 (396)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHCCCCHHHHHHHHHHTCSSTTSCG----------------------
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHHCCCCCCCCch----------------------
Confidence 4899999999999999999999999998888999999999999999999999999998
Q ss_pred CCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHH
Q psy10338 125 PKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204 (312)
Q Consensus 125 p~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~ 204 (312)
T Consensus 69 -------------------------------------------------------------------------------- 68 (396)
T 1egd_A 69 -------------------------------------------------------------------------------- 68 (396)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh---------------------------hcccceeeec
Q psy10338 205 LGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE---------------------------ASGLGAYCVT 257 (312)
Q Consensus 205 ~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~---------------------------g~~~~~~a~t 257 (312)
+|||.|+++.+.+.++|+++++|.++++.+. |+.++++++|
T Consensus 69 ------------~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~t 136 (396)
T 1egd_A 69 ------------NCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVT 136 (396)
T ss_dssp ------------GGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECC
T ss_pred ------------hhCCCCCCHHHHHHHHHHHHhhCccHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEec
Confidence 6799999999999999999998888775421 3345689999
Q ss_pred CCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCCC
Q psy10338 258 EPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRYE 306 (312)
Q Consensus 258 Ep~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~~ 306 (312)
||++|||+.+++|+|++++|||+|||+|.||||+.+|||++|++.++++
T Consensus 137 Ep~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 185 (396)
T 1egd_A 137 EPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPD 185 (396)
T ss_dssp BTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECCCC
T ss_pred CCCCCcchhhCeeEEEEeCCEEEEEEEEEcccCCcccCEEEEEEEeCCC
Confidence 9999999999999999999999999999999999999999999766543
No 11
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=99.93 E-value=8.7e-26 Score=210.78 Aligned_cols=146 Identities=27% Similarity=0.443 Sum_probs=132.3
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceec
Q psy10338 45 VFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRV 124 (312)
Q Consensus 45 ~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~V 124 (312)
.|+|.+++||+++++.+++|+++++.|...++|..+.+|+++|++|.+.||+++.+|+
T Consensus 24 ~~~~~~~~e~~~l~~~~r~~~~~~~~p~~~~~d~~~~~~~~~~~~l~e~Gl~~l~~P~---------------------- 81 (404)
T 2jif_A 24 APLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDP---------------------- 81 (404)
T ss_dssp CCTTCCCHHHHHHHHHHHHHHHHHTGGGHHHHHHHTCCCHHHHHHHHHTTTTSSSSCG----------------------
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCHHHHHHHHHCCCCccCCch----------------------
Confidence 3678899999999999999999999998888999999999999999999999999998
Q ss_pred CCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHH
Q psy10338 125 PKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204 (312)
Q Consensus 125 p~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~ 204 (312)
T Consensus 82 -------------------------------------------------------------------------------- 81 (404)
T 2jif_A 82 -------------------------------------------------------------------------------- 81 (404)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh----------------------------hcccceeee
Q psy10338 205 LGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE----------------------------ASGLGAYCV 256 (312)
Q Consensus 205 ~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~----------------------------g~~~~~~a~ 256 (312)
+|||.|+++.+.+.++|++++.|.++++... + .++++++
T Consensus 82 ------------e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g-~~~~~a~ 148 (404)
T 2jif_A 82 ------------EYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTE-KVGSFCL 148 (404)
T ss_dssp ------------GGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHT-CCEEEEC
T ss_pred ------------hhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCC-CcceEEe
Confidence 7799999999999999999999988765421 2 2458999
Q ss_pred cCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCC
Q psy10338 257 TEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRY 305 (312)
Q Consensus 257 tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~ 305 (312)
|||++|||+.+++|+|++++|+|+|||+|.||||+.+||+++|++++++
T Consensus 149 tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is~a~~Ad~~~v~ar~~~ 197 (404)
T 2jif_A 149 SEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDP 197 (404)
T ss_dssp CBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESCG
T ss_pred cCCCCCCChhhceeEEEEeCCEEEEEeEEEeecCCcccCEEEEEEEeCC
Confidence 9999999999999999999999999999999999999999999976553
No 12
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=99.93 E-value=1e-25 Score=209.09 Aligned_cols=147 Identities=31% Similarity=0.394 Sum_probs=131.6
Q ss_pred cC-CCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceec
Q psy10338 46 FY-SELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRV 124 (312)
Q Consensus 46 m~-~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~V 124 (312)
|+ |.++++|+++++.+++|+++++.|...++|..+.+|+++|++|.+.||+++.+|+
T Consensus 5 m~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~---------------------- 62 (385)
T 2pg0_A 5 MTARYLREEHHMFRAAFRKFLEKEAYPHYNDWEKRGIIPRSFWAKMGENGFLCPWVDE---------------------- 62 (385)
T ss_dssp -CCTTCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCSSTTSCG----------------------
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHHhcCCCCHHHHHHHHHCCCCCcCCCh----------------------
Confidence 66 8899999999999999999999998888999999999999999999999999998
Q ss_pred CCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHH
Q psy10338 125 PKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204 (312)
Q Consensus 125 p~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~ 204 (312)
T Consensus 63 -------------------------------------------------------------------------------- 62 (385)
T 2pg0_A 63 -------------------------------------------------------------------------------- 62 (385)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccccccccccCCCChhHhHHHHHHHHHHccC-cchHHHhh--------------------------hcccceeeec
Q psy10338 205 LGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGC-TGIMTALE--------------------------ASGLGAYCVT 257 (312)
Q Consensus 205 ~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~-~~~~~~~~--------------------------g~~~~~~a~t 257 (312)
+|||.|++..+.+.++|+++++| +++++.+. |+.++++++|
T Consensus 63 ------------~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~t 130 (385)
T 2pg0_A 63 ------------KYGGLNADFAYSVVINEELEKVGSSLVGIGLHNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMT 130 (385)
T ss_dssp ------------GGTCCCCCHHHHHHHHHHHHHHCGGGHHHHHHHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECC
T ss_pred ------------hhCCCCCCHHHHHHHHHHHHhhCCchHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeC
Confidence 77999999999999999999998 77665221 3445699999
Q ss_pred CCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCCC
Q psy10338 258 EPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRYE 306 (312)
Q Consensus 258 Ep~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~~ 306 (312)
||++|||+.+++|+|++++|||+|||+|.||||+.+|||++|.+.++++
T Consensus 131 Ep~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 179 (385)
T 2pg0_A 131 EPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGIHADLIVVACKTDPQ 179 (385)
T ss_dssp BTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEESCTT
T ss_pred CCCCCcCHhhCeEEEEEcCCEEEEEeEEecccCCcccCEEEEEEEeCCc
Confidence 9999999999999999999999999999999999999999999766543
No 13
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=99.93 E-value=4.9e-26 Score=212.05 Aligned_cols=146 Identities=33% Similarity=0.518 Sum_probs=132.1
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCC-HHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceec
Q psy10338 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYP-WGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRV 124 (312)
Q Consensus 46 m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p-~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~V 124 (312)
|+|.++++|+++++.+++|+++++.|.+.++|..+.+| +++|++|.+.||+++.+|+
T Consensus 1 M~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~~Gl~~l~~P~---------------------- 58 (397)
T 3mpi_A 1 MDFNLSKELQMLQKEVRNFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPE---------------------- 58 (397)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCTTTTHHHHHHTTTTCTTSCG----------------------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHHHCCCCccCCCh----------------------
Confidence 89999999999999999999999999999999999999 9999999999999999998
Q ss_pred CCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHH
Q psy10338 125 PKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204 (312)
Q Consensus 125 p~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~ 204 (312)
T Consensus 59 -------------------------------------------------------------------------------- 58 (397)
T 3mpi_A 59 -------------------------------------------------------------------------------- 58 (397)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccccccccccCCCCh--hHhHHHHHHHHHHccCcchHHHhh----------------------------hccccee
Q psy10338 205 LGVHNCNVFLVSVSGGLEL--SVFDGCLVAEELAYGCTGIMTALE----------------------------ASGLGAY 254 (312)
Q Consensus 205 ~~~g~~~~~~p~~~GG~g~--~~~~~~~v~e~l~~~~~~~~~~~~----------------------------g~~~~~~ 254 (312)
+|||.|+ +..+.+.+.|+++++|.++++... |+.++++
T Consensus 59 ------------~~GG~g~~~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~ 126 (397)
T 3mpi_A 59 ------------EYGGEGMDQGWLAAMIVTEEIARGSSALRVQLNMEVLGCAYTILTYGSEALKKKYVPKLSSAEFLGGF 126 (397)
T ss_dssp ------------GGTSCCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHTTTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCE
T ss_pred ------------hhCCCCCCCCHHHHHHHHHHHHhhCchHHHHHHHHHHhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEE
Confidence 6799998 888999999999998887664321 3445689
Q ss_pred eecCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCC
Q psy10338 255 CVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRY 305 (312)
Q Consensus 255 a~tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~ 305 (312)
++|||++|||+.+++|+|++++|||+|||+|.|+||+.+|||++|++.+++
T Consensus 127 a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~ 177 (397)
T 3mpi_A 127 GITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIYYAYTDK 177 (397)
T ss_dssp ECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSSEEEEEESCG
T ss_pred EecCCCCCCCcccCeEEEEEeCCEEEEEEEEEeeCCCcccCEEEEEEEcCC
Confidence 999999999999999999999999999999999999999999999976543
No 14
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=99.93 E-value=8.3e-26 Score=210.87 Aligned_cols=146 Identities=32% Similarity=0.496 Sum_probs=132.4
Q ss_pred cccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCC-HHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcce
Q psy10338 44 QVFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYP-WGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDV 122 (312)
Q Consensus 44 ~~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p-~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv 122 (312)
..|+|.++++|+++++.+++|+.+++.|.+.++|+.+.+| +++|++|.+.||+++.+ +
T Consensus 24 ~~m~~~l~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~Gl~~l~~-~-------------------- 82 (403)
T 3sf6_A 24 IGINAVLSAEEREIRDTVRSVVQRRIKPHIASWYEDGELPARELAVELGELGLLGMHL-K-------------------- 82 (403)
T ss_dssp HTCGGGSCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTCSSTTS-C--------------------
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHhcChhHHHHHhcCCCCHHHHHHHHHHCCCCcccc-h--------------------
Confidence 3589999999999999999999999999999999999999 99999999999999998 7
Q ss_pred ecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHH
Q psy10338 123 RVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQL 202 (312)
Q Consensus 123 ~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~ 202 (312)
T Consensus 83 -------------------------------------------------------------------------------- 82 (403)
T 3sf6_A 83 -------------------------------------------------------------------------------- 82 (403)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh----------------------------hccccee
Q psy10338 203 MLLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE----------------------------ASGLGAY 254 (312)
Q Consensus 203 ~~~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~----------------------------g~~~~~~ 254 (312)
+|||.|++..++..++|+++++|.++++++. |+.++++
T Consensus 83 --------------e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~ 148 (403)
T 3sf6_A 83 --------------GYGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCF 148 (403)
T ss_dssp --------------STTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEE
T ss_pred --------------hhCCCCCCHHHHHHHHHHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEE
Confidence 6799999999999999999999988654321 4456699
Q ss_pred eecCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 255 CVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 255 a~tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
++|||++|||+.+++|+|++++|||+|||+|.||||+.+||+++|++.++
T Consensus 149 a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~ar~~ 198 (403)
T 3sf6_A 149 GLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVADVAVVWARTD 198 (403)
T ss_dssp ECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEET
T ss_pred EEccCCCCCCchhcEEEEEEECCEEEEEEEEEeecCCcccCEEEEEEEeC
Confidence 99999999999999999999999999999999999999999999986553
No 15
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=99.93 E-value=9.4e-26 Score=210.51 Aligned_cols=146 Identities=32% Similarity=0.452 Sum_probs=132.2
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecC
Q psy10338 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVP 125 (312)
Q Consensus 46 m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp 125 (312)
+++.++++|+++++.+++|+++++.|...++|+.+.+|+++|++|.+.||+++.+|+
T Consensus 25 ~~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~----------------------- 81 (403)
T 3r7k_A 25 PEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLGIGFPE----------------------- 81 (403)
T ss_dssp CGGGGCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCTHHHHHHHHHTCTTBTSCG-----------------------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHhCCCCcCCCCh-----------------------
Confidence 467899999999999999999999999989999999999999999999999999998
Q ss_pred CCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHh
Q psy10338 126 KENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLL 205 (312)
Q Consensus 126 ~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~ 205 (312)
T Consensus 82 -------------------------------------------------------------------------------- 81 (403)
T 3r7k_A 82 -------------------------------------------------------------------------------- 81 (403)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccCCCChhHhHHHHHHHHHHcc-CcchHHHhh----------------------------hcccceeee
Q psy10338 206 GVHNCNVFLVSVSGGLELSVFDGCLVAEELAYG-CTGIMTALE----------------------------ASGLGAYCV 256 (312)
Q Consensus 206 ~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~-~~~~~~~~~----------------------------g~~~~~~a~ 256 (312)
+|||.|+++.+.+.++|++++. |+++++.+. |+.++++++
T Consensus 82 -----------e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~ 150 (403)
T 3r7k_A 82 -----------EVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGV 150 (403)
T ss_dssp -----------GGTCCBCCHHHHHHHHHHHHHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEEC
T ss_pred -----------hhCCCCCCHHHHHHHHHHHHhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEe
Confidence 7899999999999999999997 777532211 445679999
Q ss_pred cCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCC
Q psy10338 257 TEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRY 305 (312)
Q Consensus 257 tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~ 305 (312)
|||++|||+.+++|+|++++|||+|||+|.||||+.+|||++|++.+++
T Consensus 151 tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~ 199 (403)
T 3r7k_A 151 TEPGAGSDVANLRTRAVREGDTYVVNGAKTFITSGVRADFVTTAVRTGG 199 (403)
T ss_dssp CBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECSS
T ss_pred cCCCCCCChhhceEEEEEECCEEEEEEEEEcccCCccCCEEEEEEEcCC
Confidence 9999999999999999999999999999999999999999999976654
No 16
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=99.93 E-value=6.8e-26 Score=210.25 Aligned_cols=146 Identities=31% Similarity=0.505 Sum_probs=129.9
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceec
Q psy10338 45 VFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRV 124 (312)
Q Consensus 45 ~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~V 124 (312)
.|+|.++++|+++++.+++|+++++.|...+.|+.+.+|+++|++|.+.||+++.+|+
T Consensus 6 ~~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~---------------------- 63 (385)
T 2eba_A 6 ALEDLLTPEEKEVQKAARRFLEKEALPHIRDWWEEGVFPTHLIPRFAELGFLGPTLPP---------------------- 63 (385)
T ss_dssp CGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCGGGHHHHHHHTCSSTTSCG----------------------
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhCCccHHHHHHhCCCCHHHHHHHHHCCCcCCCCch----------------------
Confidence 4788999999999999999999999999888898899999999999999999999998
Q ss_pred CCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHH
Q psy10338 125 PKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204 (312)
Q Consensus 125 p~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~ 204 (312)
T Consensus 64 -------------------------------------------------------------------------------- 63 (385)
T 2eba_A 64 -------------------------------------------------------------------------------- 63 (385)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh----------------------------hcccceeee
Q psy10338 205 LGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE----------------------------ASGLGAYCV 256 (312)
Q Consensus 205 ~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~----------------------------g~~~~~~a~ 256 (312)
+|||.|+++.+.+.++|+++++|.++++.+. |+.++++++
T Consensus 64 ------------~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~ 131 (385)
T 2eba_A 64 ------------EYGGAGVSSAAYGLICYELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGL 131 (385)
T ss_dssp ------------GGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEEC
T ss_pred ------------hhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 7799999999999999999998888764321 444569999
Q ss_pred cCCCCCCCc-CCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 257 TEPGAGSDV-NGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 257 tEp~~gsd~-~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
|||++|||+ .+++|+|++++|||+|||+|.||||+.+|||++|++.++
T Consensus 132 tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~ 180 (385)
T 2eba_A 132 TEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDE 180 (385)
T ss_dssp CCTTCTTSTTTTCCCEEEC--CEEEEEEEEEEEETTTTCSEEEEEEECC
T ss_pred CCCCcCCCccccCeeEEEEeCCEEEEEeeeeccCCCcccCEEEEEEEeC
Confidence 999999999 999999999999999999999999999999999997654
No 17
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=99.93 E-value=1.1e-25 Score=210.81 Aligned_cols=149 Identities=26% Similarity=0.257 Sum_probs=125.0
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcC------------------CCCHHHHHHHHHcCCccccCCCCCCc
Q psy10338 45 VFYSELNETQQEFQALARKFCREEIIPVAAEHDRTG------------------EYPWGIVKKAHELGLINGHIPASEQN 106 (312)
Q Consensus 45 ~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~------------------~~p~~~~~~l~~~G~~~~~~P~~~~~ 106 (312)
.|+|.++++|+++++.+++|+++++.|...+++..+ .+|+++|++|.+.||+++.+|+
T Consensus 4 ~M~~~~~~~~~~l~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~G~~~~~~P~---- 79 (415)
T 4hr3_A 4 SMDFAPSARAAELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLPD---- 79 (415)
T ss_dssp ---CCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCSCSGGGGSCCTHHHHHHHHHHHTTCSSTTCCC----
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCccHHHHhhhccccccccccccccccCcchhHHHHHHHHHhCCCcCcCCCH----
Confidence 489999999999999999999999988877665443 2678999999999999999998
Q ss_pred cCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhh
Q psy10338 107 MGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGM 186 (312)
Q Consensus 107 ~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v 186 (312)
T Consensus 80 -------------------------------------------------------------------------------- 79 (415)
T 4hr3_A 80 -------------------------------------------------------------------------------- 79 (415)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhhHHHHHHHHHhcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHH---------------------
Q psy10338 187 YLKIQYVSIFEREIQLMLLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTA--------------------- 245 (312)
Q Consensus 187 ~~~l~~~a~~~~~~~~~~~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~--------------------- 245 (312)
+|||.|++..+.+.++|++++.|.+..++
T Consensus 80 ------------------------------~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q 129 (415)
T 4hr3_A 80 ------------------------------PELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQ 129 (415)
T ss_dssp ------------------------------TTTSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHH
T ss_pred ------------------------------HHCCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHH
Confidence 77999999999999999999887432211
Q ss_pred --------hhhcccceeeecCCC-CCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCc--ccEEEEEeccCCCC
Q psy10338 246 --------LEASGLGAYCVTEPG-AGSDVNGVKTKAVKKGDEWILNGQKMWITNGGV--ANWQNRTRDFRYEK 307 (312)
Q Consensus 246 --------~~g~~~~~~a~tEp~-~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~--ad~~~v~~~~~~~~ 307 (312)
..|+.++++++|||+ +|||+.+++|+|++++|||+|||+|.||||+.+ |||++|++.++++.
T Consensus 130 ~~~~l~~~~~G~~~~~~a~tEp~~~gsd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~~~~ 202 (415)
T 4hr3_A 130 KEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAATAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNA 202 (415)
T ss_dssp HHHTHHHHHTTSCEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCTTS
T ss_pred HHHHHHHHhCCCceeEEEEcCCCCCCCchhhCeeEEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEEeCCCC
Confidence 114556799999999 999999999999999999999999999999977 99999997776544
No 18
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=99.93 E-value=1.4e-25 Score=209.14 Aligned_cols=145 Identities=27% Similarity=0.450 Sum_probs=131.7
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceec
Q psy10338 45 VFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRV 124 (312)
Q Consensus 45 ~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~V 124 (312)
.|++.++++|+++++.+++|+.+++.|...++|+.+.+|+++|++|.+.||+++.+ +
T Consensus 21 ~m~~~l~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~-~---------------------- 77 (399)
T 3swo_A 21 DTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHL-Q---------------------- 77 (399)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCTTHHHHHHHHTCTTTTS-C----------------------
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHHCCCCcCCh-h----------------------
Confidence 37889999999999999999999999999999999999999999999999999998 8
Q ss_pred CCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHH
Q psy10338 125 PKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204 (312)
Q Consensus 125 p~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~ 204 (312)
T Consensus 78 -------------------------------------------------------------------------------- 77 (399)
T 3swo_A 78 -------------------------------------------------------------------------------- 77 (399)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh----------------------------hcccceeee
Q psy10338 205 LGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE----------------------------ASGLGAYCV 256 (312)
Q Consensus 205 ~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~----------------------------g~~~~~~a~ 256 (312)
+|||.|+++.+.+.++|+++++|.++++++. |+.++++++
T Consensus 78 ------------e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~ 145 (399)
T 3swo_A 78 ------------GYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGL 145 (399)
T ss_dssp ------------STTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEEC
T ss_pred ------------hhCCCCCCHHHHHHHHHHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEe
Confidence 6799999999999999999999988754321 445569999
Q ss_pred cCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 257 TEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 257 tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
|||++|||+.+++|+|++++|||+|||+|.||||+.+|||++|++.++
T Consensus 146 tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~ 193 (399)
T 3swo_A 146 TEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTD 193 (399)
T ss_dssp CBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEBCT
T ss_pred cCCCCCCCCccceEEEEEeCCEEEEEEEEEeECCCCccCEEEEEEEeC
Confidence 999999999999999999999999999999999999999999997654
No 19
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=99.93 E-value=1.6e-25 Score=210.77 Aligned_cols=144 Identities=27% Similarity=0.413 Sum_probs=125.3
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecC
Q psy10338 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVP 125 (312)
Q Consensus 46 m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp 125 (312)
|++.+++||+++++.+++|+++++.|...++++.+.+|+++|++|.+.||+++.+| +
T Consensus 51 ~~~~l~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~p~~~~~~l~e~Gl~~l~~p-e---------------------- 107 (436)
T 2ix5_A 51 FNDLLTPEEQAIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIK-G---------------------- 107 (436)
T ss_dssp GGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCGGGHHHHHTTTCTTTTCC-S----------------------
T ss_pred cCCCCCHHHHHHHHHHHHHHHhhCChhhHHHHhcCCCCHHHHHHHHHcCCCcCcCC-C----------------------
Confidence 56689999999999999999999999888888788999999999999999999988 3
Q ss_pred CCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHh
Q psy10338 126 KENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLL 205 (312)
Q Consensus 126 ~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~ 205 (312)
T Consensus 108 -------------------------------------------------------------------------------- 107 (436)
T 2ix5_A 108 -------------------------------------------------------------------------------- 107 (436)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHh----------------------------hhcccceeeec
Q psy10338 206 GVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTAL----------------------------EASGLGAYCVT 257 (312)
Q Consensus 206 ~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~----------------------------~g~~~~~~a~t 257 (312)
|||.|++..+...++|+++++|.++++++ .|+.++++++|
T Consensus 108 ------------~GG~G~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~t 175 (436)
T 2ix5_A 108 ------------YGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALT 175 (436)
T ss_dssp ------------TTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECC
T ss_pred ------------CCCCCCCHHHHHHHHHHHHhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEec
Confidence 47777777788888888888777765322 14456699999
Q ss_pred CCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 258 EPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 258 Ep~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
||++|||+.+++|+|++++|||+|||+|.||||+.+|||++|+++++
T Consensus 176 Ep~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~a~~Ad~~lv~Ar~~ 222 (436)
T 2ix5_A 176 EPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNT 222 (436)
T ss_dssp BTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEET
T ss_pred CCCCCCCcccceEEEEEeCCEEEEeeeccCCCCCcccCEEEEEEEEC
Confidence 99999999999999999999999999999999999999999996654
No 20
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.93 E-value=2.3e-25 Score=207.30 Aligned_cols=145 Identities=34% Similarity=0.490 Sum_probs=130.8
Q ss_pred CCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCH--HHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecC
Q psy10338 48 SELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPW--GIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVP 125 (312)
Q Consensus 48 ~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~--~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp 125 (312)
|.+++||+++++.+++|+++++.|...++|..+.+|+ ++|++|.+.||+++.+|+
T Consensus 11 ~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~----------------------- 67 (394)
T 1ivh_A 11 NGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPV----------------------- 67 (394)
T ss_dssp GTCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCG-----------------------
T ss_pred cCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCchHHHHHHHHHCCCCCCCCCc-----------------------
Confidence 6799999999999999999999998888999999998 999999999999999998
Q ss_pred CCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHh
Q psy10338 126 KENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLL 205 (312)
Q Consensus 126 ~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~ 205 (312)
T Consensus 68 -------------------------------------------------------------------------------- 67 (394)
T 1ivh_A 68 -------------------------------------------------------------------------------- 67 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh----------------------------hcccceeeec
Q psy10338 206 GVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE----------------------------ASGLGAYCVT 257 (312)
Q Consensus 206 ~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~----------------------------g~~~~~~a~t 257 (312)
+|||.|+++.+.+.++|++++.|.++++... |+.++++++|
T Consensus 68 -----------e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~t 136 (394)
T 1ivh_A 68 -----------QYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMS 136 (394)
T ss_dssp -----------GGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECC
T ss_pred -----------ccCCCCCCHHHHHHHHHHHHhhchhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 7799999999999999999999888765332 3445699999
Q ss_pred CCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCCC
Q psy10338 258 EPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRYE 306 (312)
Q Consensus 258 Ep~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~~ 306 (312)
||++|||+.+++|+|++++|||+|||+|.||||+.+|||++|++.++++
T Consensus 137 Ep~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~~~Ad~~~v~ar~~~~ 185 (394)
T 1ivh_A 137 EPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLA 185 (394)
T ss_dssp BTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETGGGCSEEEEEEESCTT
T ss_pred CCCCCcCcccceEEEEEcCCEEEEEeEEEeeCCCCcCCEEEEEEEeCCc
Confidence 9999999999999999999999999999999999999999999766543
No 21
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=99.93 E-value=2.7e-25 Score=205.26 Aligned_cols=143 Identities=34% Similarity=0.535 Sum_probs=127.1
Q ss_pred CCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecCCC
Q psy10338 48 SELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKE 127 (312)
Q Consensus 48 ~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp~~ 127 (312)
|.+++||+++++.+++|+++++.|...++|+.+.+|+++|++|.+.||+++.+|+
T Consensus 1 ~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~------------------------- 55 (372)
T 2dvl_A 1 MTLTQEQRLVLDAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPE------------------------- 55 (372)
T ss_dssp --CCHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHTTGGGTTSCG-------------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHhCCCCCCCCCh-------------------------
Confidence 4579999999999999999999998888899899999999999999999999998
Q ss_pred CccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHhcc
Q psy10338 128 NVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLLGV 207 (312)
Q Consensus 128 ~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~~~ 207 (312)
T Consensus 56 -------------------------------------------------------------------------------- 55 (372)
T 2dvl_A 56 -------------------------------------------------------------------------------- 55 (372)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh----------------------------hcccceeeecCC
Q psy10338 208 HNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE----------------------------ASGLGAYCVTEP 259 (312)
Q Consensus 208 g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~----------------------------g~~~~~~a~tEp 259 (312)
+|||.|+++.+...+.|++++.|.++++.+. |+.++++++|||
T Consensus 56 ---------~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp 126 (372)
T 2dvl_A 56 ---------EWGGVGLDSVTWALALEELAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEP 126 (372)
T ss_dssp ---------GGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCS
T ss_pred ---------hhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCC
Confidence 6799999999999999999998887664322 334568999999
Q ss_pred CCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 260 GAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 260 ~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
++|||+.+++|+|++++|||+|||+|.||||+.+|||++|++.++
T Consensus 127 ~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~ 171 (372)
T 2dvl_A 127 QAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHAHLYVVMARTE 171 (372)
T ss_dssp SCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEET
T ss_pred CCCCChhhCeeEEEEECCEEEEEeEEEeecCCCcCCEEEEEEEeC
Confidence 999999999999999999999999999999999999999986553
No 22
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=99.92 E-value=1.1e-24 Score=202.52 Aligned_cols=145 Identities=27% Similarity=0.398 Sum_probs=128.1
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceec
Q psy10338 45 VFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRV 124 (312)
Q Consensus 45 ~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~V 124 (312)
.|+|.+++||+++++.+++|+++++.|...+.+..+.+|+++|++|.+.||+++.+ +
T Consensus 9 ~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~-~---------------------- 65 (392)
T 1siq_A 9 VLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTI-K---------------------- 65 (392)
T ss_dssp CGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTC-E----------------------
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhcCcchHHHHhhCCCCHHHHHHHHhCCCCcccH-H----------------------
Confidence 48889999999999999999999999988888888899999999999999999988 7
Q ss_pred CCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHH
Q psy10338 125 PKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204 (312)
Q Consensus 125 p~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~ 204 (312)
T Consensus 66 -------------------------------------------------------------------------------- 65 (392)
T 1siq_A 66 -------------------------------------------------------------------------------- 65 (392)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHh----------------------------hhcccceeee
Q psy10338 205 LGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTAL----------------------------EASGLGAYCV 256 (312)
Q Consensus 205 ~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~----------------------------~g~~~~~~a~ 256 (312)
+|||.|++..+...+.|++++.|.++++.. .|+.++++++
T Consensus 66 ------------~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~ 133 (392)
T 1siq_A 66 ------------GYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGL 133 (392)
T ss_dssp ------------ETTEECCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEEC
T ss_pred ------------hhCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 668888888888888888888887654321 1445679999
Q ss_pred cCCCCCCCcCCceeEEEEe--CCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 257 TEPGAGSDVNGVKTKAVKK--GDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 257 tEp~~gsd~~~~~t~A~~~--~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
|||++|||+.+++|+|+++ +|||+|||+|.||||+.+|||++|++.++
T Consensus 134 tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~a~~~ 183 (392)
T 1siq_A 134 TEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCE 183 (392)
T ss_dssp CBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEEEETGGGCSEEEEEEEET
T ss_pred CCCCCCcCccccEEEEEEeCCCCEEEEEEEEEeecCCcccCEEEEEEEEC
Confidence 9999999999999999999 99999999999999999999999996654
No 23
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=99.91 E-value=2e-24 Score=203.59 Aligned_cols=146 Identities=23% Similarity=0.342 Sum_probs=125.4
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhh----cC-CCC--HHHHHHHHHcCCccccCCCCCCccCCcCCCcccE
Q psy10338 45 VFYSELNETQQEFQALARKFCREEIIPVAAEHDR----TG-EYP--WGIVKKAHELGLINGHIPASEQNMGQRASDTRGI 117 (312)
Q Consensus 45 ~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~----~~-~~p--~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v 117 (312)
+|+|.+++||++|++.+++|+++++.|...+++. .+ .|| +++|++|.+.||+++.+|+
T Consensus 2 ~m~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~--------------- 66 (438)
T 3mkh_A 2 AIDFHLSASQKGTYQAARSLARNLLMPARQTYLQHPPNSPLRFQSTQPTYAAAVSAGILKGQISP--------------- 66 (438)
T ss_dssp CCBCCCCHHHHHHHHHHHHHHHHTHHHHHHHHTTSCTTCHHHHHTTHHHHHHHHHTTTTGGGSCG---------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhcCcHHHHHhhccccccCcCCCcHHHHHHHHhCCCCCCCCCc---------------
Confidence 3899999999999999999999999998776643 22 465 8999999999999999998
Q ss_pred EEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHH
Q psy10338 118 TFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFE 197 (312)
Q Consensus 118 ~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~ 197 (312)
T Consensus 67 -------------------------------------------------------------------------------- 66 (438)
T 3mkh_A 67 -------------------------------------------------------------------------------- 66 (438)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh--------------------------h--c
Q psy10338 198 REIQLMLLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE--------------------------A--S 249 (312)
Q Consensus 198 ~~~~~~~~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~--------------------------g--~ 249 (312)
+|||.|++..+++.++|+|++.|+++++.+. | +
T Consensus 67 -------------------e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~l~~~~~G~g~ 127 (438)
T 3mkh_A 67 -------------------AHGGTGGTLIESAILVEECYSVEPSAALTIFATGLGLTPINLAAGPQHAEFLAPFLSGEGS 127 (438)
T ss_dssp -------------------GGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCGGGHHHHGGGSSSCSC
T ss_pred -------------------ccCCCCCCHHHHHHHHHHHHhhChhHHHHHHHhhHHHHHHHhhCCHHHHHHHHHHhcCCCC
Confidence 7799999999999999999988887664211 2 3
Q ss_pred ccceeeecCCCCCC-----CcCCceeEEEEeCCEEEEeeeeeeeeCCC-----cccEEEEEeccC
Q psy10338 250 GLGAYCVTEPGAGS-----DVNGVKTKAVKKGDEWILNGQKMWITNGG-----VANWQNRTRDFR 304 (312)
Q Consensus 250 ~~~~~a~tEp~~gs-----d~~~~~t~A~~~~~g~~l~G~k~~vs~~~-----~ad~~~v~~~~~ 304 (312)
.++++++|||++|| |+.+++|+|++++|||+|||+|.||||+. +||+++|++.+.
T Consensus 128 ~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~~~~Ad~~~v~a~~~ 192 (438)
T 3mkh_A 128 PLASLVFSEPGGVANALEKGAPGFQTTARLEGDEWVINGEKMWATNCAGWDFKGCDLACVVCRDA 192 (438)
T ss_dssp CCEEEECCCTTCCTTTTCTTSCCCSCEEEEETTEEEEEEEECSCTTTTCTTSSCCSEEEEEEEEC
T ss_pred ceEEEEEccCCCCCCccccccccceeEEEEeCCEEEEEeEEEEecCCCccccccCcEEEEEEEec
Confidence 56799999999998 68899999999999999999999999997 899999996553
No 24
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=99.90 E-value=9e-24 Score=205.57 Aligned_cols=144 Identities=28% Similarity=0.460 Sum_probs=123.4
Q ss_pred CCCCHHHHHHHHHHHHhhhhcccchhhhhhhcC-CCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecCC
Q psy10338 48 SELNETQQEFQALARKFCREEIIPVAAEHDRTG-EYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPK 126 (312)
Q Consensus 48 ~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~-~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp~ 126 (312)
..+++||++|++.+++|+++++.|...+++..+ .+|+++|++++++||+++.+|+
T Consensus 31 ~~lt~eq~~l~~~vr~f~~~~~~p~~~~~d~~~~~~~~~~~~~l~e~Gl~gl~vPe------------------------ 86 (597)
T 3owa_A 31 EDFSSEHKMIAKTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPE------------------------ 86 (597)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHTGGGHHHHTTTCHHHHHHHHHHHHHTTTTCTTSCG------------------------
T ss_pred cCCCHHHHHHHHHHHHHHHHhCchhHHHHHhcCCcCCHHHHHHHHHCCCCcCCCCh------------------------
Confidence 458999999999999999999999888888765 6889999999999999999998
Q ss_pred CCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHhc
Q psy10338 127 ENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLLG 206 (312)
Q Consensus 127 ~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~~ 206 (312)
T Consensus 87 -------------------------------------------------------------------------------- 86 (597)
T 3owa_A 87 -------------------------------------------------------------------------------- 86 (597)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccCCCChhHhHHHHHHHHHHccCcchHHH---------------------------hhhcccceeeecCC
Q psy10338 207 VHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTA---------------------------LEASGLGAYCVTEP 259 (312)
Q Consensus 207 ~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~---------------------------~~g~~~~~~a~tEp 259 (312)
+|||.|+++.+...+.|++++++.+..++ ..|+.++++++|||
T Consensus 87 ----------e~GG~G~~~~~~~~v~Eel~~~~~~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp 156 (597)
T 3owa_A 87 ----------EYGGIGLDKVSSALIAEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEP 156 (597)
T ss_dssp ----------GGTCCCCCHHHHHHHHHHHGGGTHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBT
T ss_pred ----------hhCCCCCCHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCC
Confidence 67888888888888888888876433221 11556779999999
Q ss_pred CCCCCcCCceeEEEEe--CCEEEEeeeeeeeeCCCcccEEEEEeccCC
Q psy10338 260 GAGSDVNGVKTKAVKK--GDEWILNGQKMWITNGGVANWQNRTRDFRY 305 (312)
Q Consensus 260 ~~gsd~~~~~t~A~~~--~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~ 305 (312)
++|||+.+++|+|+++ |++|+|||+|.||||+.+|||++|++.+++
T Consensus 157 ~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~a~~Ad~~lV~Art~~ 204 (597)
T 3owa_A 157 GSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDG 204 (597)
T ss_dssp TBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT
T ss_pred CCCCCcccceeEEEEeCCCCEEEEeeEEEEeCCCccCCEEEEEEEeCC
Confidence 9999999999999985 457999999999999999999999976653
No 25
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=99.90 E-value=1.1e-23 Score=198.52 Aligned_cols=145 Identities=23% Similarity=0.360 Sum_probs=125.2
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhc----CCCC--HHHHHHHHHcCCccccCCCCCCccCCcCCCcccEE
Q psy10338 45 VFYSELNETQQEFQALARKFCREEIIPVAAEHDRT----GEYP--WGIVKKAHELGLINGHIPASEQNMGQRASDTRGIT 118 (312)
Q Consensus 45 ~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~----~~~p--~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~ 118 (312)
+|+|.++++|+++++.+++|+++++.|...+++.. +.+| +++|++|.+.||+++.+|+
T Consensus 1 ~M~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~P~---------------- 64 (439)
T 2c12_A 1 MVDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPI---------------- 64 (439)
T ss_dssp -CBCCCCHHHHHHHHHHHHHHHHTGGGHHHHHTTCSSHHHHHHTTHHHHHHHHHTTTTGGGSBG----------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCChhHHHHhhcccccCCCCChHHHHHHHHHCCCCCCCCCh----------------
Confidence 48999999999999999999999999987766653 3455 8999999999999999997
Q ss_pred EcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHH
Q psy10338 119 FEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFER 198 (312)
Q Consensus 119 f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~ 198 (312)
T Consensus 65 -------------------------------------------------------------------------------- 64 (439)
T 2c12_A 65 -------------------------------------------------------------------------------- 64 (439)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhh-----------------------------hc
Q psy10338 199 EIQLMLLGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALE-----------------------------AS 249 (312)
Q Consensus 199 ~~~~~~~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~-----------------------------g~ 249 (312)
+|||.|++..+.+.++|++++.|+++++.+. |+
T Consensus 65 ------------------~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~~~G~ 126 (439)
T 2c12_A 65 ------------------PLGGTMESLVHESIILEELFAVEPATSITIVATALGLMPVILCDSPSLQEKFLKPFISGEGE 126 (439)
T ss_dssp ------------------GGTCCBCCHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHHSSCHHHHHHHTGGGGSSCSC
T ss_pred ------------------hhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHhhcCCC
Confidence 7799999999999999999998887764321 33
Q ss_pred ccceeeecCCCCCC-----CcCCceeEEEEeCCEEEEeeeeeeeeCCC-----cccEEEEEecc
Q psy10338 250 GLGAYCVTEPGAGS-----DVNGVKTKAVKKGDEWILNGQKMWITNGG-----VANWQNRTRDF 303 (312)
Q Consensus 250 ~~~~~a~tEp~~gs-----d~~~~~t~A~~~~~g~~l~G~k~~vs~~~-----~ad~~~v~~~~ 303 (312)
.++++++|||++|| |+.+++|+|++++|||+|||+|.||||+. +||+++|++++
T Consensus 127 ~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g~~lnG~K~~is~~~~~~~~~Ad~~~v~ar~ 190 (439)
T 2c12_A 127 PLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRV 190 (439)
T ss_dssp CCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTEEEEEEEEECCTTTTTTTSSCCSEEEEEEEE
T ss_pred EEEEEEecCCCCCCCccccccccceeEEEEcCCEEEEEeEEEeecCCCccccccCcEEEEEEEc
Confidence 45689999999997 58889999999999999999999999997 99999999765
No 26
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=99.88 E-value=8.3e-23 Score=188.23 Aligned_cols=132 Identities=23% Similarity=0.329 Sum_probs=116.5
Q ss_pred HHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecCCCCccccCCccHH
Q psy10338 59 ALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFK 138 (312)
Q Consensus 59 ~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~ 138 (312)
+.+++|+++++.|...++|..+.+|+++|++|.+.||+++.+|+
T Consensus 2 ~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~------------------------------------ 45 (366)
T 1r2j_A 2 PERDALLTDLVGDRAAEWDTSGELPRDLLVRLGADGLLCAEVAA------------------------------------ 45 (366)
T ss_dssp -CCHHHHHHHHSSCHHHHHHHTCCCHHHHHHHHHTTTTSTTSCG------------------------------------
T ss_pred hHHHHHHHHhccccHHHHhhcCCCCHHHHHHHHHCCCCCCCCCh------------------------------------
Confidence 45788999999998888999999999999999999999999998
Q ss_pred HHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHhccccccccccccc
Q psy10338 139 IAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLLGVHNCNVFLVSVS 218 (312)
Q Consensus 139 ~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~~~g~~~~~~p~~~ 218 (312)
+|
T Consensus 46 ------------------------------------------------------------------------------~~ 47 (366)
T 1r2j_A 46 ------------------------------------------------------------------------------EH 47 (366)
T ss_dssp ------------------------------------------------------------------------------GG
T ss_pred ------------------------------------------------------------------------------hh
Confidence 67
Q ss_pred CCCChhHhHHHHHHHHHHccCcchHHHhh---------------------------hcccceeeecCCCCCCCcCCceeE
Q psy10338 219 GGLELSVFDGCLVAEELAYGCTGIMTALE---------------------------ASGLGAYCVTEPGAGSDVNGVKTK 271 (312)
Q Consensus 219 GG~g~~~~~~~~v~e~l~~~~~~~~~~~~---------------------------g~~~~~~a~tEp~~gsd~~~~~t~ 271 (312)
||.|+++.+...++|++++.|.++++... |+ +.++++|||++|||+.+++|+
T Consensus 48 GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~ 126 (366)
T 1r2j_A 48 GGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAAWTVQRLGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTR 126 (366)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCE
T ss_pred CCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeE
Confidence 99999999999999999998888764321 33 668999999999999999999
Q ss_pred EEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCC
Q psy10338 272 AVKKGDEWILNGQKMWITNGGVANWQNRTRDFRY 305 (312)
Q Consensus 272 A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~ 305 (312)
|++++|||+|||+|.||||+.+|||++|++++++
T Consensus 127 A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~ 160 (366)
T 1r2j_A 127 VRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQED 160 (366)
T ss_dssp EEEETTEEEEEEEEEEETTTTTCSEEEEEEBCSS
T ss_pred EEEeCCEEEEEEEEecccCCcccCEEEEEEEeCC
Confidence 9999999999999999999999999999976653
No 27
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=99.88 E-value=2.9e-22 Score=194.71 Aligned_cols=141 Identities=35% Similarity=0.583 Sum_probs=117.7
Q ss_pred CCCHHHHHHHHHHHHhhhhcccchhhhhhhc-CCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecCCC
Q psy10338 49 ELNETQQEFQALARKFCREEIIPVAAEHDRT-GEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKE 127 (312)
Q Consensus 49 ~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~-~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp~~ 127 (312)
++++||+++++.+++|+++++.|...+.+.. ..+|+++|+++.+.||+++.+|+
T Consensus 27 ~~~~e~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~l~e~Gl~~l~vPe------------------------- 81 (577)
T 2z1q_A 27 DFDESVKEIARTTRTFVEREVLPLLERMEHGELELNVPLMRKAGELGLLAIDVPE------------------------- 81 (577)
T ss_dssp GCCHHHHHHHHHHHHHHHTTTHHHHHHHHTTCGGGHHHHHHHHHHTTTTSTTSCG-------------------------
T ss_pred CCCHHHHHHHHHHHHHHhccCchhHHhhhcccCCCCHHHHHHHHHCCCCCcCCCh-------------------------
Confidence 4799999999999999999998885555433 36899999999999999999998
Q ss_pred CccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHhcc
Q psy10338 128 NVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLLGV 207 (312)
Q Consensus 128 ~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~~~ 207 (312)
T Consensus 82 -------------------------------------------------------------------------------- 81 (577)
T 2z1q_A 82 -------------------------------------------------------------------------------- 81 (577)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccCCCChhHhHHHHHHHHHHccCcchHHHh----------------------------hhcccceeeecCC
Q psy10338 208 HNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTAL----------------------------EASGLGAYCVTEP 259 (312)
Q Consensus 208 g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~----------------------------~g~~~~~~a~tEp 259 (312)
+|||.|++..+...++|++ ..|++.++.+ .|+.++|+++|||
T Consensus 82 ---------e~GG~g~~~~~~~~v~eel-~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp 151 (577)
T 2z1q_A 82 ---------EYGGLDLPKVISTVVAEEL-SGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEP 151 (577)
T ss_dssp ---------GGTCCCCCHHHHHHHHHHH-TTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBT
T ss_pred ---------hhCCCCCCHHHHHHHHHHH-hhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCC
Confidence 6688888888888888888 5565544321 2555679999999
Q ss_pred CCCCCcCCceeEEEEe--CCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 260 GAGSDVNGVKTKAVKK--GDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 260 ~~gsd~~~~~t~A~~~--~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
++|||+.+++|+|+++ +++|+|||+|.||||+.+||+++|+++++
T Consensus 152 ~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V~Ar~~ 198 (577)
T 2z1q_A 152 GSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVD 198 (577)
T ss_dssp TBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEET
T ss_pred CCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCCCCccCEEEEEEEeC
Confidence 9999999999999984 55899999999999999999999997654
No 28
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=99.87 E-value=1.4e-22 Score=190.53 Aligned_cols=62 Identities=23% Similarity=0.461 Sum_probs=56.1
Q ss_pred HhhhcccceeeecCCC-CCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCc--ccEEEEEeccCCC
Q psy10338 245 ALEASGLGAYCVTEPG-AGSDVNGVKTKAVKKGDEWILNGQKMWITNGGV--ANWQNRTRDFRYE 306 (312)
Q Consensus 245 ~~~g~~~~~~a~tEp~-~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~--ad~~~v~~~~~~~ 306 (312)
+..|+.++++++|||+ +|||+.+++|+|++++|||+|||+|.||||+.+ |||++|++.++++
T Consensus 143 l~~G~~~~~~a~tEp~~aGsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~~~Ad~~~v~art~~~ 207 (428)
T 2wbi_A 143 LLQGNITSCFCMTEPDVASSDATNIECSIQRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNT 207 (428)
T ss_dssp HHHTSSEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCCT
T ss_pred HhCCCeEEEEEEecCCcCCCCcccceEEEEEeCCEEEEEeEEeccCCCCCCcCCEEEEEEEeCCc
Confidence 4457788899999999 999999999999999999999999999999988 9999999776543
No 29
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=99.86 E-value=4.5e-21 Score=187.01 Aligned_cols=140 Identities=28% Similarity=0.408 Sum_probs=115.2
Q ss_pred CCCHHHHH----HHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceec
Q psy10338 49 ELNETQQE----FQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRV 124 (312)
Q Consensus 49 ~l~~~~~~----l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~V 124 (312)
.+++++++ +++.+++|+.+++.|. ++|....+|+++|+++.+.||+++.+|+
T Consensus 45 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~--~~d~~~~~p~~~~~~l~e~Gl~~l~~P~---------------------- 100 (607)
T 2uxw_A 45 VLNEEQTQFLKELVEPVSRFFEEVNDPA--KNDALEMVEETTWQGLKELGAFGLQVPS---------------------- 100 (607)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTCCHH--HHHHHTSCCHHHHHHHHHTTTTCTTSCG----------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCHH--HhccccCCCHHHHHHHHHcCCcCCCCCh----------------------
Confidence 45777754 8899999999887653 4577788999999999999999999998
Q ss_pred CCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHH
Q psy10338 125 PKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLML 204 (312)
Q Consensus 125 p~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~ 204 (312)
T Consensus 101 -------------------------------------------------------------------------------- 100 (607)
T 2uxw_A 101 -------------------------------------------------------------------------------- 100 (607)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHh----------------------------hhcccceeee
Q psy10338 205 LGVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTAL----------------------------EASGLGAYCV 256 (312)
Q Consensus 205 ~~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~----------------------------~g~~~~~~a~ 256 (312)
+|||.|++..+...+.|+++++|.++++.+ .|+.++++++
T Consensus 101 ------------e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~al 168 (607)
T 2uxw_A 101 ------------ELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCL 168 (607)
T ss_dssp ------------GGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEEC
T ss_pred ------------hhCCCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 567777777777777777777666654322 2555779999
Q ss_pred cCCCCCCCcCCceeEEEEeC--CEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 257 TEPGAGSDVNGVKTKAVKKG--DEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 257 tEp~~gsd~~~~~t~A~~~~--~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
|||++|||+.+++|+|++++ ++|+|||+|.|||++..||+++|++.+.
T Consensus 169 TEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~~ 218 (607)
T 2uxw_A 169 TEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTP 218 (607)
T ss_dssp CBTTBSSCGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEEE
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEec
Confidence 99999999999999999973 4899999999999999999999986553
No 30
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=99.85 E-value=2.1e-21 Score=183.02 Aligned_cols=143 Identities=19% Similarity=0.270 Sum_probs=117.7
Q ss_pred cccCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEccee
Q psy10338 44 QVFYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVR 123 (312)
Q Consensus 44 ~~m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~ 123 (312)
..|+|.++++|+++++.+++|+. ++.|.+.++|+.+.+|+++|++|.+.||+++.+|+
T Consensus 14 ~~m~~~lt~e~~~l~~~~r~~~~-~~~~~a~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~--------------------- 71 (439)
T 3m9v_A 14 TGLYAPVTPAGRVLLDRLAAHLP-RIRSTAAEHDRDGTFPTDTFDALRKDGLMGATVPA--------------------- 71 (439)
T ss_dssp STTSSCSSHHHHHHHHHHHTTHH-HHHHHHHHHHHHTCCCHHHHHHHHHTTGGGTTSCG---------------------
T ss_pred CCCCCCCCHHHHHHHHHHHHHHH-HHhhhHHHHHhcCCCCHHHHHHHHHCCCccCCCCh---------------------
Confidence 34999999999999999999997 58888889999999999999999999999999998
Q ss_pred cCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHH
Q psy10338 124 VPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLM 203 (312)
Q Consensus 124 Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~ 203 (312)
T Consensus 72 -------------------------------------------------------------------------------- 71 (439)
T 3m9v_A 72 -------------------------------------------------------------------------------- 71 (439)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcccccccccccccCCCC-hhHhHHHHHHHHHHccCcchHHHh---------------------------------hhc
Q psy10338 204 LLGVHNCNVFLVSVSGGLE-LSVFDGCLVAEELAYGCTGIMTAL---------------------------------EAS 249 (312)
Q Consensus 204 ~~~~g~~~~~~p~~~GG~g-~~~~~~~~v~e~l~~~~~~~~~~~---------------------------------~g~ 249 (312)
+|||.| .++.+++.++|++++.|.++++.+ .|+
T Consensus 72 -------------~~GG~gl~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~ 138 (439)
T 3m9v_A 72 -------------ELGGLGVDRLYDVAVALLAVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGD 138 (439)
T ss_dssp -------------GGTSCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTC
T ss_pred -------------hhCCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCC
Confidence 667777 677777788888887777655321 134
Q ss_pred ccceeeecCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCCC
Q psy10338 250 GLGAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRYE 306 (312)
Q Consensus 250 ~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~~ 306 (312)
.++++++|||++ |...++|+ ++|||+|||+|.||||+.+|||++|.+.++++
T Consensus 139 ~~~~~a~tEp~~--~~~~~~t~---~~~g~vlnG~K~~~s~a~~Ad~~~v~art~~~ 190 (439)
T 3m9v_A 139 AVVCSGIKDHHT--AVTTLRPD---GAGGWLLSGRKTLVSMAPVGTHFVINARTDGT 190 (439)
T ss_dssp CCEEEECEECTT--CCCEEEEC---SSSCEEEEEEEEEETTGGGCSEEEECEEECC-
T ss_pred ceEEEeecCCCC--CCCceeec---cCCEEEEEeEEEeecCccccCEEEEEEEecCC
Confidence 567999999975 44444433 78899999999999999999999999766543
No 31
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=99.84 E-value=3.9e-21 Score=178.68 Aligned_cols=140 Identities=21% Similarity=0.285 Sum_probs=115.3
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecC
Q psy10338 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVP 125 (312)
Q Consensus 46 m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp 125 (312)
|.+.+|+||+++++.+++|+. ++.|.+.++|+++.+|+++|++|.+.||+++.+|+
T Consensus 5 ~~~~lt~e~~~~~~~~r~~~~-~~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~----------------------- 60 (395)
T 3mxl_A 5 LRAPLTPAGRTVVDLLAGVIP-RISAEAADRDRTGTFPVEAFEQFAKLGLMGATVPA----------------------- 60 (395)
T ss_dssp SSSCCSHHHHHHHHHHTTTHH-HHHHHHHHHHHHTCCCHHHHHHHHHHTGGGCSSCT-----------------------
T ss_pred cccCCCHHHHHHHHHHHHHHH-HHhhchHHHhhhCCCCHHHHHHHHHCCCcCcCCCh-----------------------
Confidence 567899999999999999997 48899999999999999999999999999999998
Q ss_pred CCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHh
Q psy10338 126 KENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLL 205 (312)
Q Consensus 126 ~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~ 205 (312)
T Consensus 61 -------------------------------------------------------------------------------- 60 (395)
T 3mxl_A 61 -------------------------------------------------------------------------------- 60 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccCCCC-hhHhHHHHHHHHHHccCcchHHHh---------------------------------hhccc
Q psy10338 206 GVHNCNVFLVSVSGGLE-LSVFDGCLVAEELAYGCTGIMTAL---------------------------------EASGL 251 (312)
Q Consensus 206 ~~g~~~~~~p~~~GG~g-~~~~~~~~v~e~l~~~~~~~~~~~---------------------------------~g~~~ 251 (312)
+|||.| .+..+.+.++|+++++|.++++.. .|+.+
T Consensus 61 -----------~~GG~g~~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~ 129 (395)
T 3mxl_A 61 -----------ELGGLGLTRLYDVATALMRLAEADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAA 129 (395)
T ss_dssp -----------TTTSCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCC
T ss_pred -----------hhCCCCCcCHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcE
Confidence 567777 777777788888888777655321 13346
Q ss_pred ceeeecCCCCCCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCC
Q psy10338 252 GAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRY 305 (312)
Q Consensus 252 ~~~a~tEp~~gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~ 305 (312)
.++++|||++|+ ..++| +++|||+|||+|.||||+.+|||++|++.+++
T Consensus 130 ~~~a~tEp~~~~--~~~~t---~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~ 178 (395)
T 3mxl_A 130 VCGALKDAPGVV--TELHS---DGAGGWLLSGRKVLVSMAPIATHFFVHAQRRD 178 (395)
T ss_dssp EECCCSBCTTCC--CEEEE---CSSSCEEEEEEEEEETTGGGCSEECCCEEEEC
T ss_pred EEEEecCCCCCC--CceEE---ecCCEEEEeeEEEEecCccccCEEEEEEEeCC
Confidence 699999998653 33333 37889999999999999999999999866543
No 32
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=99.84 E-value=6.3e-21 Score=178.45 Aligned_cols=134 Identities=12% Similarity=-0.023 Sum_probs=108.3
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecC
Q psy10338 46 FYSELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVP 125 (312)
Q Consensus 46 m~~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp 125 (312)
.+|.++++|+++++.+++|+++ +.|.+.++|+.+.+|+++|++|.+.||+++.+|+
T Consensus 14 ~~~~~~~~~~~l~~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~----------------------- 69 (414)
T 2or0_A 14 RENLYFQGMGRVLDRIEVVAEE-IRGQAVQSEADCRLTDAAAGLLRDSGAIRLLQPR----------------------- 69 (414)
T ss_dssp ---------CHHHHHHHHTHHH-HHHHHHHHHHHTSCCHHHHHHHHHHTGGGTTSCG-----------------------
T ss_pred ccCCCCccHHHHHHHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCchhcCch-----------------------
Confidence 4788999999999999999985 8888888999999999999999999999999998
Q ss_pred CCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHh
Q psy10338 126 KENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLL 205 (312)
Q Consensus 126 ~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~ 205 (312)
T Consensus 70 -------------------------------------------------------------------------------- 69 (414)
T 2or0_A 70 -------------------------------------------------------------------------------- 69 (414)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhhhcc------------------------cceeeecCCCC
Q psy10338 206 GVHNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALEASG------------------------LGAYCVTEPGA 261 (312)
Q Consensus 206 ~~g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~g~~------------------------~~~~a~tEp~~ 261 (312)
+|||.|+++.+.+.++|++++.|.++++.+..+. +.++++|
T Consensus 70 -----------e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~g~~~~a~a~t---- 134 (414)
T 2or0_A 70 -----------LYGGYEVHPREFAETVMGVAALDGASGWVTGIVGVHPWELAFADPQVQEEIWGEDNDTWMASPYA---- 134 (414)
T ss_dssp -----------GGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTHHHHHTTSCHHHHHHHHSSCTTCCEECCCS----
T ss_pred -----------hhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHhCCHHHHHHHHccCCCeEEEeccC----
Confidence 7799999999999999999999999886543221 1222222
Q ss_pred CCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 262 GSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 262 gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
++|+|++++|||+|||+|.||||+.+|||++|++.++
T Consensus 135 ------p~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~ 171 (414)
T 2or0_A 135 ------PMGVATPVDGGYVLKGRWSFSSGTDHCQWAFLGAMVG 171 (414)
T ss_dssp ------CCEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEC
T ss_pred ------CCceeEEECCeEEEEeeEeccCCCchhhEEEEEEEec
Confidence 4789999999999999999999999999999997654
No 33
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=99.79 E-value=4.2e-19 Score=166.41 Aligned_cols=130 Identities=21% Similarity=0.208 Sum_probs=108.8
Q ss_pred CCCCHHHHHHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecCCC
Q psy10338 48 SELNETQQEFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKE 127 (312)
Q Consensus 48 ~~l~~~~~~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp~~ 127 (312)
.++++ +++++.+++|++ ++.|.+.++|+.+.+|+++|++|.+.||+++.+|+
T Consensus 33 ~~~~~--~~l~~~~r~~~~-~~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~------------------------- 84 (422)
T 2jbr_A 33 PDVSG--VSMLEKIQQILP-QIAKNAESAEQLRRVPDENIKLLKEIGLHRAFQPK------------------------- 84 (422)
T ss_dssp CCCSS--CCHHHHHHHHHH-HHHHTHHHHHHHTSCCHHHHHHHHHTTGGGSSSCG-------------------------
T ss_pred CCCCH--HHHHHHHHHHHH-HHHHhhHHHHHcCCCCHHHHHHHHHCCchhcCCch-------------------------
Confidence 33444 468999999997 58888888899999999999999999999999998
Q ss_pred CccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHhcc
Q psy10338 128 NVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLLGV 207 (312)
Q Consensus 128 ~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~~~ 207 (312)
T Consensus 85 -------------------------------------------------------------------------------- 84 (422)
T 2jbr_A 85 -------------------------------------------------------------------------------- 84 (422)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccCCCChhHhHHHHHHHHHHccCcchHHHhhhc------------------------ccceeeecCCCCCC
Q psy10338 208 HNCNVFLVSVSGGLELSVFDGCLVAEELAYGCTGIMTALEAS------------------------GLGAYCVTEPGAGS 263 (312)
Q Consensus 208 g~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~g~------------------------~~~~~a~tEp~~gs 263 (312)
+|||.|+++.+...++|+++++|.++++.+..+ .+.++++|
T Consensus 85 ---------e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~g~~~~a~a~t------ 149 (422)
T 2jbr_A 85 ---------VYGGLEMSLPDFANCIVTLAGACAGTAWAFSLLCTHSHQIAMFSKQLQDEIWLKDPDATASSSIA------ 149 (422)
T ss_dssp ---------GGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCTTCCEEEECS------
T ss_pred ---------hcCCCCCCHHHHHHHHHHHHhhCcCHHHHHHHHHHHHHHHHhCCHHHHHHHHccCCCeEEEeecC------
Confidence 789999999999999999999999988643311 12233333
Q ss_pred CcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 264 DVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 264 d~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
++|+|++++|||+|||+|.||||+.+|||++|++.++
T Consensus 150 ----p~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~ 186 (422)
T 2jbr_A 150 ----PFGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGFNRF 186 (422)
T ss_dssp ----CCSEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEE
T ss_pred ----CCeeEEEeCCEEEEeeeEeeecCCccccEEEEEEEec
Confidence 4789999999999999999999999999999996654
No 34
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=99.78 E-value=1.1e-18 Score=161.96 Aligned_cols=123 Identities=14% Similarity=0.081 Sum_probs=105.7
Q ss_pred HHHHHHHHhhhhcccchhhhhhhcCCCCHHHHHHHHHcCCccccCCCCCCccCCcCCCcccEEEcceecCCCCccccCCc
Q psy10338 56 EFQALARKFCREEIIPVAAEHDRTGEYPWGIVKKAHELGLINGHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGA 135 (312)
Q Consensus 56 ~l~~~~~~f~~~~~~p~~~~~d~~~~~p~~~~~~l~~~G~~~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~ 135 (312)
++++.+++|+++ +.|.+.++|+.+.+|+++|++|.+.||+++.+|+
T Consensus 11 ~l~~~~~~~~~~-~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~--------------------------------- 56 (394)
T 2rfq_A 11 EVMQRLDALLPT-LRERAQETEDLRRIPDDSMKALQETGFFRLLQPE--------------------------------- 56 (394)
T ss_dssp HHHHHHHHHHHH-HHHTHHHHHHHTSCCHHHHHHHHHHTGGGTTSCG---------------------------------
T ss_pred HHHHHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCceecCch---------------------------------
Confidence 688999999974 8888888999999999999999999999999998
Q ss_pred cHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHHHhhhHHHHHHHHHhcccccccccc
Q psy10338 136 GFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQYVSIFEREIQLMLLGVHNCNVFLV 215 (312)
Q Consensus 136 G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~~~a~~~~~~~~~~~~~g~~~~~~p 215 (312)
T Consensus 57 -------------------------------------------------------------------------------- 56 (394)
T 2rfq_A 57 -------------------------------------------------------------------------------- 56 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCChhHhHHHHHHHHHHccCcchHHHhhhc------------------------ccceeeecCCCCCCCcCCceeE
Q psy10338 216 SVSGGLELSVFDGCLVAEELAYGCTGIMTALEAS------------------------GLGAYCVTEPGAGSDVNGVKTK 271 (312)
Q Consensus 216 ~~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~g~------------------------~~~~~a~tEp~~gsd~~~~~t~ 271 (312)
+|||.|++..+.+.++|+++++|.++++.+..+ .+.++++| ++|+
T Consensus 57 -~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~g~~~~~~a~t----------p~t~ 125 (394)
T 2rfq_A 57 -QWGGYQADPVLFYSAVRKIASACGSTGWVSSIIGVHNWHLALFSQQAQEDVWGNDTDVRISSSYA----------PMGA 125 (394)
T ss_dssp -GGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHSSCTTCCEEEECS----------CSEE
T ss_pred -hhCCCCCCHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHHhCCHHHHHHHhCCCCCeEEEeccC----------CCce
Confidence 789999999999999999999999988653311 12233332 3789
Q ss_pred EEEeCCEEEEeeeeeeeeCCCcccEEEEEecc
Q psy10338 272 AVKKGDEWILNGQKMWITNGGVANWQNRTRDF 303 (312)
Q Consensus 272 A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~ 303 (312)
|++++|||+|||+|.||||+.+|||++|++.+
T Consensus 126 A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~ 157 (394)
T 2rfq_A 126 GQVVDGGYTVNGAWAWSSGCDHASWAVLGGPV 157 (394)
T ss_dssp EEEETTEEEEEEEEEEETTGGGCSEEEEEEEE
T ss_pred EEEeCCeEEEeeeEeccCCCcccceEEEeeee
Confidence 99999999999999999999999999999665
No 35
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=99.50 E-value=8.4e-15 Score=144.18 Aligned_cols=61 Identities=30% Similarity=0.452 Sum_probs=55.2
Q ss_pred HHhhhcccceeeecCCCCCCCcCCceeEEEEe--CCEEEEe-----eeeeeeeC-CCcccEEEEEeccC
Q psy10338 244 TALEASGLGAYCVTEPGAGSDVNGVKTKAVKK--GDEWILN-----GQKMWITN-GGVANWQNRTRDFR 304 (312)
Q Consensus 244 ~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~l~-----G~k~~vs~-~~~ad~~~v~~~~~ 304 (312)
.+..|+.++|+++|||++|||+.+++|+|+++ +|+|+|| |+|.|||| +.+|||++|++.++
T Consensus 125 ~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad~~lV~Ar~~ 193 (659)
T 1w07_A 125 LANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLI 193 (659)
T ss_dssp HHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEECCTTTTTTCSEEEEEEEEE
T ss_pred HHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCCEEEEEEEEC
Confidence 34568889999999999999999999999998 6899999 99999999 89999999996554
No 36
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=99.48 E-value=5.3e-14 Score=130.23 Aligned_cols=100 Identities=38% Similarity=0.497 Sum_probs=91.3
Q ss_pred ccCCCCCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy10338 98 GHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFG 177 (312)
Q Consensus 98 ~~~P~~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg 177 (312)
+.+.+.++++|+++.+++++.||||+||.++++|.++.||.+.+..++.+|+.+++.++|+++++++.+++|+++|++||
T Consensus 199 v~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg 278 (387)
T 2d29_A 199 LKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFG 278 (387)
T ss_dssp EEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETT
T ss_pred eeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCC
Confidence 33333678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchhhHHHHHHhhhHH
Q psy10338 178 VPIAAHQGMYLKIQYVSIFE 197 (312)
Q Consensus 178 ~~l~~~q~v~~~l~~~a~~~ 197 (312)
+|+.++|.+|++++......
T Consensus 279 ~~i~~~q~vq~~la~~~~~~ 298 (387)
T 2d29_A 279 RPIAEFEGVSFKLAEAATEL 298 (387)
T ss_dssp EEGGGSHHHHHHHHHHHHHH
T ss_pred cchHhhHHHHHHHHHHHHHH
Confidence 99999999999977665543
No 37
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=99.47 E-value=5.8e-14 Score=130.68 Aligned_cols=95 Identities=37% Similarity=0.566 Sum_probs=88.9
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.+++++.||||+||.++++|.++.||.+.+..++.+|+.+++.++|+++++++.+++|+++|++||+|+.+
T Consensus 221 ~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~ 300 (404)
T 2jif_A 221 PENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFD 300 (404)
T ss_dssp CCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred CcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCcccc
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhHH
Q psy10338 183 HQGMYLKIQYVSIFE 197 (312)
Q Consensus 183 ~q~v~~~l~~~a~~~ 197 (312)
+|.+|++++......
T Consensus 301 ~q~vq~~la~~~~~~ 315 (404)
T 2jif_A 301 FQGLQHQVAHVATQL 315 (404)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH
Confidence 999999977665543
No 38
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=99.47 E-value=5.7e-14 Score=129.65 Aligned_cols=95 Identities=58% Similarity=0.782 Sum_probs=89.1
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.+++++.||||+||.++++|.++.||.+.+..++.+|+.+++.++|+++++++.+++|+++|++||+|+.+
T Consensus 197 ~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fg~~i~~ 276 (379)
T 1ukw_A 197 IHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIAN 276 (379)
T ss_dssp CCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGG
T ss_pred ccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhh
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhHH
Q psy10338 183 HQGMYLKIQYVSIFE 197 (312)
Q Consensus 183 ~q~v~~~l~~~a~~~ 197 (312)
+|.+|++++......
T Consensus 277 ~q~vq~~la~~~~~~ 291 (379)
T 1ukw_A 277 FQAIQFKLVDMLIGI 291 (379)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 999999977665543
No 39
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=99.47 E-value=6.3e-14 Score=129.02 Aligned_cols=95 Identities=38% Similarity=0.546 Sum_probs=88.7
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.+++++.||||+||.++++|.++.||.+.+..++.+|+.+++.++|+++++++.+++|+++|++||+|+.+
T Consensus 191 ~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~ 270 (372)
T 2dvl_A 191 PEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGKKLKE 270 (372)
T ss_dssp CCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred cccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhh
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhHH
Q psy10338 183 HQGMYLKIQYVSIFE 197 (312)
Q Consensus 183 ~q~v~~~l~~~a~~~ 197 (312)
+|.+|++++......
T Consensus 271 ~q~vq~~la~~~~~~ 285 (372)
T 2dvl_A 271 HQAIAFKIADMHVKI 285 (372)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 999999977655543
No 40
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=99.47 E-value=6.4e-14 Score=129.58 Aligned_cols=96 Identities=27% Similarity=0.397 Sum_probs=89.5
Q ss_pred CCCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcc
Q psy10338 102 ASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIA 181 (312)
Q Consensus 102 ~~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~ 181 (312)
+.++++|+++.+++++.||||+||.++++|.++.||.+++..++.+|+.+++.++|+++++++.+++|+++|++||+|+.
T Consensus 203 ~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~ 282 (385)
T 2pg0_A 203 RKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVS 282 (385)
T ss_dssp CCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGG
T ss_pred CCccccccCCCceEEEEEcceEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCccc
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHhhhHH
Q psy10338 182 AHQGMYLKIQYVSIFE 197 (312)
Q Consensus 182 ~~q~v~~~l~~~a~~~ 197 (312)
++|.+|++++......
T Consensus 283 ~~q~v~~~la~~~~~~ 298 (385)
T 2pg0_A 283 EFQTVQFRLAEMATEI 298 (385)
T ss_dssp GSHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHH
Confidence 9999999977655543
No 41
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=99.47 E-value=5.6e-14 Score=130.34 Aligned_cols=95 Identities=38% Similarity=0.665 Sum_probs=89.4
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
+++++|+++.++++++||||+||.++++|.++.||.+.+..++.+|+.+++.++|+++++++.+++|+++|.+||+|+.+
T Consensus 211 ~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~ 290 (393)
T 3pfd_A 211 KERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSD 290 (393)
T ss_dssp ECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred CCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhh
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhHH
Q psy10338 183 HQGMYLKIQYVSIFE 197 (312)
Q Consensus 183 ~q~v~~~l~~~a~~~ 197 (312)
+|.+|+++.......
T Consensus 291 ~q~vq~~la~~~~~~ 305 (393)
T 3pfd_A 291 NQGVQFMLADMAMKI 305 (393)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 999999977655543
No 42
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=99.47 E-value=7.3e-14 Score=129.46 Aligned_cols=95 Identities=41% Similarity=0.645 Sum_probs=89.1
Q ss_pred CCCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcc
Q psy10338 102 ASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIA 181 (312)
Q Consensus 102 ~~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~ 181 (312)
+.++++|+++.+++++.||||+||.++++|.++.||.+.+..++.+|+.+++.++|+++++++.+++|+++|++||+|+.
T Consensus 198 ~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~ 277 (391)
T 2vig_A 198 KKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLT 277 (391)
T ss_dssp CCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGG
T ss_pred CccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcch
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHhhhH
Q psy10338 182 AHQGMYLKIQYVSIF 196 (312)
Q Consensus 182 ~~q~v~~~l~~~a~~ 196 (312)
++|.+|++++.....
T Consensus 278 ~~q~v~~~la~~~~~ 292 (391)
T 2vig_A 278 KLQVIQFKLADMALA 292 (391)
T ss_dssp GSHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHH
Confidence 999999997765554
No 43
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=99.47 E-value=6.1e-14 Score=129.61 Aligned_cols=94 Identities=41% Similarity=0.638 Sum_probs=88.6
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.++++++||||+||.++++|.++.||.+++..++.+|+.+++.++|+++++++.+++|+++|++||+|+.+
T Consensus 202 ~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~~i~~ 281 (383)
T 1buc_A 202 KEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCK 281 (383)
T ss_dssp ECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred ccccccccCCceeEEEEccEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhh
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhH
Q psy10338 183 HQGMYLKIQYVSIF 196 (312)
Q Consensus 183 ~q~v~~~l~~~a~~ 196 (312)
+|.+|++++.....
T Consensus 282 ~q~vq~~la~~~~~ 295 (383)
T 1buc_A 282 FQSISFKLADMKMQ 295 (383)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 99999997765554
No 44
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=99.46 E-value=6.8e-14 Score=129.90 Aligned_cols=100 Identities=64% Similarity=0.943 Sum_probs=91.1
Q ss_pred ccCCCCCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy10338 98 GHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFG 177 (312)
Q Consensus 98 ~~~P~~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg 177 (312)
+.+-+.++++|+++.++++++||||+||.++++|.++.||.+.+..++.+|+.+++.++|+++++++.+++|+++|++||
T Consensus 206 v~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG 285 (396)
T 1egd_A 206 IQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFG 285 (396)
T ss_dssp EEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETT
T ss_pred eeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCC
Confidence 33333678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchhhHHHHHHhhhHH
Q psy10338 178 VPIAAHQGMYLKIQYVSIFE 197 (312)
Q Consensus 178 ~~l~~~q~v~~~l~~~a~~~ 197 (312)
+|+.++|.+|++++......
T Consensus 286 ~~i~~~q~vq~~la~~~~~~ 305 (396)
T 1egd_A 286 KLLVEHQAISFMLAEMAMKV 305 (396)
T ss_dssp EEGGGSHHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHHH
Confidence 99999999999977665543
No 45
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=99.46 E-value=6.3e-14 Score=130.43 Aligned_cols=95 Identities=36% Similarity=0.494 Sum_probs=89.6
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
+++++|+++.++++|.||||+||.++++|.++.|+.+.+..++.+|+.+++.++|+++++++.+++|+++|++||+|+.+
T Consensus 222 ~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~ 301 (403)
T 3r7k_A 222 RLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTG 301 (403)
T ss_dssp ECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred cccccCCCCCCceEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCCCchhh
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhHH
Q psy10338 183 HQGMYLKIQYVSIFE 197 (312)
Q Consensus 183 ~q~v~~~l~~~a~~~ 197 (312)
+|.+|+++.......
T Consensus 302 ~q~vq~~la~~~~~~ 316 (403)
T 3r7k_A 302 RQIIRHKLAEMARQV 316 (403)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH
Confidence 999999977665543
No 46
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=99.46 E-value=1.3e-13 Score=133.97 Aligned_cols=93 Identities=41% Similarity=0.580 Sum_probs=87.9
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
..+++|+++.+++++.|+||+||.+++||.++.||.+++..++.+|+.+++.++|.++++++.+++|+++|+|||+|+.+
T Consensus 219 ~~~~~G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~pi~~ 298 (577)
T 2z1q_A 219 EEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGRPIGR 298 (577)
T ss_dssp CCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSSSBGGG
T ss_pred CCCCCCCCCCceeEEEecceeccHHHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhh
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhh
Q psy10338 183 HQGMYLKIQYVSI 195 (312)
Q Consensus 183 ~q~v~~~l~~~a~ 195 (312)
+|.+|++++....
T Consensus 299 ~q~vq~~La~~~~ 311 (577)
T 2z1q_A 299 FGLIQQKLGEMAS 311 (577)
T ss_dssp SHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999999765444
No 47
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=99.46 E-value=8.5e-14 Score=135.43 Aligned_cols=93 Identities=34% Similarity=0.514 Sum_probs=88.0
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.+++++.||||+||.++++|.++.|+.+++..++.+|+.+++.++|.++++++.+++|+++|.+||+|+++
T Consensus 224 ~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~pi~~ 303 (597)
T 3owa_A 224 EEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIAR 303 (597)
T ss_dssp CCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred ccccccCCCCCceEEEEeceeecHHHhcCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCccccc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhh
Q psy10338 183 HQGMYLKIQYVSI 195 (312)
Q Consensus 183 ~q~v~~~l~~~a~ 195 (312)
+|.+|++++....
T Consensus 304 ~q~vq~~LA~m~~ 316 (597)
T 3owa_A 304 FPLIQEKLANMAA 316 (597)
T ss_dssp SHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9999999655444
No 48
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.45 E-value=9.9e-14 Score=128.67 Aligned_cols=100 Identities=27% Similarity=0.365 Sum_probs=90.4
Q ss_pred ccCCCCCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy10338 98 GHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFG 177 (312)
Q Consensus 98 ~~~P~~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg 177 (312)
+.+.+...++|+++.++++|+||||+||.++++|.++.||.+++..++.+|+.+++.++|+++++++.+++|+++|++||
T Consensus 205 v~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG 284 (393)
T 1rx0_A 205 LSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFG 284 (393)
T ss_dssp EEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETT
T ss_pred eEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCC
Confidence 33333567789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchhhHHHHHHhhhHH
Q psy10338 178 VPIAAHQGMYLKIQYVSIFE 197 (312)
Q Consensus 178 ~~l~~~q~v~~~l~~~a~~~ 197 (312)
+|+.++|.+|++++......
T Consensus 285 ~~i~~~q~vq~~la~~~~~~ 304 (393)
T 1rx0_A 285 EPLASNQYLQFTLADMATRL 304 (393)
T ss_dssp EEGGGCHHHHHHHHHHHHHH
T ss_pred CchhhhHHHHHHHHHHHHHH
Confidence 99999999999977655543
No 49
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=99.45 E-value=7.5e-14 Score=129.91 Aligned_cols=95 Identities=32% Similarity=0.460 Sum_probs=89.5
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.++++|+||||+||.++++|.++.|+.+.+..++.+|+.+++.++|+++++++.+++|+++|.+||+|+.+
T Consensus 219 ~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~pi~~ 298 (403)
T 3p4t_A 219 KLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAYAGAQRCLDLTVEWCRNRDTFGRPLIS 298 (403)
T ss_dssp ECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred CCCcccCCCCCeeEEEEcceEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcccc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhHH
Q psy10338 183 HQGMYLKIQYVSIFE 197 (312)
Q Consensus 183 ~q~v~~~l~~~a~~~ 197 (312)
+|.+|++++......
T Consensus 299 ~q~vq~~la~~~~~~ 313 (403)
T 3p4t_A 299 RQAVQNTLAGMARRI 313 (403)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH
Confidence 999999977665543
No 50
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.45 E-value=8.4e-14 Score=129.17 Aligned_cols=96 Identities=32% Similarity=0.428 Sum_probs=89.5
Q ss_pred CCCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcc
Q psy10338 102 ASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIA 181 (312)
Q Consensus 102 ~~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~ 181 (312)
+.++++|+++.+++++.||||+||.++++|.++.||.+.+..++.+|+.+++.++|+++++++.+++|+++|++||+|+.
T Consensus 209 ~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~ 288 (394)
T 1ivh_A 209 KKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIG 288 (394)
T ss_dssp CCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTEEGG
T ss_pred cccccccCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchh
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHhhhHH
Q psy10338 182 AHQGMYLKIQYVSIFE 197 (312)
Q Consensus 182 ~~q~v~~~l~~~a~~~ 197 (312)
++|.+|++++......
T Consensus 289 ~~q~vq~~la~~~~~~ 304 (394)
T 1ivh_A 289 HFQLMQGKMADMYTRL 304 (394)
T ss_dssp GSHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH
Confidence 9999999977665543
No 51
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=99.45 E-value=8.1e-14 Score=130.16 Aligned_cols=95 Identities=29% Similarity=0.454 Sum_probs=88.7
Q ss_pred CCCccCCcCCC--cccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCc
Q psy10338 103 SEQNMGQRASD--TRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPI 180 (312)
Q Consensus 103 ~~~~~g~~~~~--~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l 180 (312)
+++++|+++.+ +++|+||||+||+++++|.++.||.+.+..++.+|+.+++.++|+++++++.+++|+++|++||+|+
T Consensus 225 ~~~~~g~r~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i 304 (415)
T 4hr3_A 225 MLPTMGFYDEPGGHGVVSFDNVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPL 304 (415)
T ss_dssp ECCBTTBCCTTTCEEEEEEEEEEEEGGGBSSCTTCHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEG
T ss_pred CCCccccCCCCCCeeEEEEccEEECHHHcCCCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCcH
Confidence 47789999887 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHhhhHH
Q psy10338 181 AAHQGMYLKIQYVSIFE 197 (312)
Q Consensus 181 ~~~q~v~~~l~~~a~~~ 197 (312)
.++|.+|++++......
T Consensus 305 ~~~q~vq~~la~~~~~~ 321 (415)
T 4hr3_A 305 VNLGGNRERIADARIAI 321 (415)
T ss_dssp GGSTTHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHH
Confidence 99999999977655543
No 52
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=99.44 E-value=1.3e-13 Score=127.67 Aligned_cols=95 Identities=37% Similarity=0.521 Sum_probs=82.5
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.+++++.||||+||.++++|.++.|+.+.+..++.+|+.+++.++|+++++++.+++|+++|.+||+|+.+
T Consensus 206 ~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~ 285 (387)
T 3nf4_A 206 PEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGRKIID 285 (387)
T ss_dssp CCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CTTT
T ss_pred cccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCCchhh
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhHH
Q psy10338 183 HQGMYLKIQYVSIFE 197 (312)
Q Consensus 183 ~q~v~~~l~~~a~~~ 197 (312)
+|.+|++++......
T Consensus 286 ~q~v~~~la~~~~~~ 300 (387)
T 3nf4_A 286 HQGLGFLLADMAAAV 300 (387)
T ss_dssp C-CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 999999977665543
No 53
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=99.44 E-value=5.9e-14 Score=128.95 Aligned_cols=95 Identities=31% Similarity=0.432 Sum_probs=88.3
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHH-HhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIA-MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIA 181 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~-~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~ 181 (312)
.++++|+++.++++++||||+||.++++|.++.||.++ +..++.+|+.+++.++|+++++++.+++|+++|++||+|+.
T Consensus 180 ~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~ 259 (366)
T 1r2j_A 180 VPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAWGCVGILRACRTAAVAHARTREQFGRPLG 259 (366)
T ss_dssp CSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEGG
T ss_pred CcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCchh
Confidence 45789999999999999999999999999999999998 88999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHhhhHH
Q psy10338 182 AHQGMYLKIQYVSIFE 197 (312)
Q Consensus 182 ~~q~v~~~l~~~a~~~ 197 (312)
++|.+|+++.......
T Consensus 260 ~~q~v~~~la~~~~~~ 275 (366)
T 1r2j_A 260 DHQLVAGHIADLWTAE 275 (366)
T ss_dssp GSHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHH
Confidence 9999999977655543
No 54
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=99.43 E-value=1.7e-13 Score=133.53 Aligned_cols=94 Identities=34% Similarity=0.487 Sum_probs=89.0
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
..+++|+++.+++++.|+||+||.++++|.+++||.+++..++.+|+.+++.++|+++++++.+++|+++|.|||+||++
T Consensus 248 ~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~ 327 (607)
T 2uxw_A 248 PEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHN 327 (607)
T ss_dssp CCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred CccccCCCCCCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchhh
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhH
Q psy10338 183 HQGMYLKIQYVSIF 196 (312)
Q Consensus 183 ~q~v~~~l~~~a~~ 196 (312)
+|.+|++++.....
T Consensus 328 ~~~vq~~La~~~~~ 341 (607)
T 2uxw_A 328 FGLIQEKLARMVML 341 (607)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 99999997765554
No 55
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=99.42 E-value=1.9e-13 Score=126.95 Aligned_cols=93 Identities=23% Similarity=0.374 Sum_probs=87.3
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.+++++.||||+||+++++|. +.||.+.+..++.+|+.+++.++|+++++++.+++|+++|.+||+|+.+
T Consensus 213 ~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fG~~i~~ 291 (399)
T 3swo_A 213 IHRKLSLRASVTSELVLDNVRLPASAQLPL-AEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSN 291 (399)
T ss_dssp CCCBSSCCSSCEEEEEEEEEEECGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred CcCcccCCCCceeEEEEccEEEcHHHcCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhh
Confidence 467889999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhH
Q psy10338 183 HQGMYLKIQYVSIF 196 (312)
Q Consensus 183 ~q~v~~~l~~~a~~ 196 (312)
+|.+|++++.....
T Consensus 292 ~q~vq~~la~~~~~ 305 (399)
T 3swo_A 292 YQLTQEKLANMTVE 305 (399)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999997665554
No 56
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=99.42 E-value=1.9e-13 Score=126.91 Aligned_cols=95 Identities=40% Similarity=0.596 Sum_probs=89.0
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.+++++.||||+||+++++|.++.|+.+.+..++..|+.+++.++|+++++++.+++|+++|.+||+|+.+
T Consensus 201 ~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~~i~~ 280 (397)
T 3mpi_A 201 NLEKLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGKPIGD 280 (397)
T ss_dssp ECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred cCccccCcCCceeEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhh
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhHH
Q psy10338 183 HQGMYLKIQYVSIFE 197 (312)
Q Consensus 183 ~q~v~~~l~~~a~~~ 197 (312)
+|.+|+++.......
T Consensus 281 ~q~vq~~la~~~~~~ 295 (397)
T 3mpi_A 281 FQMNQDMIAQMAVEV 295 (397)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 999999976655543
No 57
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=99.42 E-value=2.9e-13 Score=127.23 Aligned_cols=94 Identities=32% Similarity=0.431 Sum_probs=87.7
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCC-CCcc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFG-VPIA 181 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg-~~l~ 181 (312)
.++++|+++.++++|.||||+||++++||.++.||.+++..++.+|+.+++.++|+++++++.+++|+++|++|| +|++
T Consensus 229 ~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~pi~ 308 (438)
T 3mkh_A 229 HVATPGHTSVSGPHVRYTNVRVPTKNVLCPAGQGAKVAFGAFDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLL 308 (438)
T ss_dssp CCCCSSCTTCCCCEEEEEEEEEEGGGEEECTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSCGG
T ss_pred cCCCcCCcCCCceEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCeecc
Confidence 466789999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cchhhHHHHHHhhhH
Q psy10338 182 AHQGMYLKIQYVSIF 196 (312)
Q Consensus 182 ~~q~v~~~l~~~a~~ 196 (312)
++|.+|++++.....
T Consensus 309 ~~q~vq~~la~~~~~ 323 (438)
T 3mkh_A 309 ERQAFADLLSGVKIQ 323 (438)
T ss_dssp GSHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHH
Confidence 999999996655443
No 58
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=99.42 E-value=1.4e-13 Score=129.02 Aligned_cols=93 Identities=32% Similarity=0.400 Sum_probs=86.4
Q ss_pred CCCccCCcCCC---cccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q psy10338 103 SEQNMGQRASD---TRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVP 179 (312)
Q Consensus 103 ~~~~~g~~~~~---~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~ 179 (312)
.++++|+++.+ +++|+||||+||.++++|.++.||.+.+..++.+|+.+++.++|+++++++.+++|+++|++||+|
T Consensus 232 ~~~~~G~~~~~~~~~~~v~fddv~VP~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~ 311 (428)
T 2wbi_A 232 PLSVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEISQGRLGPGRIHHCMRTVGLAERALQIMCERATQRIAFKKK 311 (428)
T ss_dssp ECCBTTBCCGGGCCEEEEEEEEEEEEGGGBCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE
T ss_pred CCCccccCCCCCCCeEEEEeCceEECHHHhcCCccchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCC
Confidence 56788999885 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHhhh
Q psy10338 180 IAAHQGMYLKIQYVSI 195 (312)
Q Consensus 180 l~~~q~v~~~l~~~a~ 195 (312)
+.++|.+|++++....
T Consensus 312 i~~~q~vq~~la~~~~ 327 (428)
T 2wbi_A 312 LYAHEVVAHWIAESRI 327 (428)
T ss_dssp GGGSHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHH
Confidence 9999999999665443
No 59
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=99.40 E-value=4.1e-13 Score=124.60 Aligned_cols=94 Identities=34% Similarity=0.484 Sum_probs=86.8
Q ss_pred CCCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcc
Q psy10338 102 ASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIA 181 (312)
Q Consensus 102 ~~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~ 181 (312)
+...++|+++.+++++.||||+||.++++|. +.|+.+.+..++.+|+.+++.++|+++++++.+++|+++|.+||+|+.
T Consensus 210 ~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~ 288 (396)
T 3ii9_A 210 AIHGKVGLRASITGEIVLDEAFVPEENILPH-VKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLA 288 (396)
T ss_dssp BCCCCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGG
T ss_pred cccccccCCcCCeeEEEEccEEECHHHccCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCCchh
Confidence 3567889999999999999999999999987 899999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHhhhH
Q psy10338 182 AHQGMYLKIQYVSIF 196 (312)
Q Consensus 182 ~~q~v~~~l~~~a~~ 196 (312)
++|.+|+++......
T Consensus 289 ~~q~vq~~la~~~~~ 303 (396)
T 3ii9_A 289 ANQLIQKKLADMQTE 303 (396)
T ss_dssp GSHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHH
Confidence 999999996654443
No 60
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=99.40 E-value=3.4e-13 Score=124.70 Aligned_cols=93 Identities=30% Similarity=0.448 Sum_probs=86.8
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.+++++.||||+||+++++ .++.|+...+..++.+|+.+++.++|+++++++.+++|+++|++||+|+.+
T Consensus 201 ~~~~~G~~~~~~~~v~f~~v~Vp~~~~l-~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~ 279 (385)
T 2eba_A 201 VKRKMSLRASVTSELVLEEVRVPESLRL-PKALGLKAPLSCLTQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGEPLAK 279 (385)
T ss_dssp CCSBSSSCSSCEEEEEEEEEEEEGGGBC-TTCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGG
T ss_pred cccccccccCceeEEEEccEEEcHHHcc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCeeHHh
Confidence 4578899999999999999999999999 788999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhH
Q psy10338 183 HQGMYLKIQYVSIF 196 (312)
Q Consensus 183 ~q~v~~~l~~~a~~ 196 (312)
+|.+|++++.....
T Consensus 280 ~q~vq~~la~~~~~ 293 (385)
T 2eba_A 280 KQLVQAKLAEMLAW 293 (385)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999997765554
No 61
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=99.40 E-value=2.7e-13 Score=126.11 Aligned_cols=93 Identities=28% Similarity=0.444 Sum_probs=87.3
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.+++++.||||+||+++++|. +.|+.+.+..++.+|+.+++.++|+++++++.+++|+++|++||+|+.+
T Consensus 218 ~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~pi~~ 296 (403)
T 3sf6_A 218 IKSKMSLRASVTSELVLDGVRLPDSARLPG-ATSLGAPLRCLNEARFGIVFGALGAARDCLETALAYACSREQFDRPIGG 296 (403)
T ss_dssp CCSCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred CCCccCCCCCceeEEEEccEEEcHHHccCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCcchh
Confidence 567889999999999999999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhhH
Q psy10338 183 HQGMYLKIQYVSIF 196 (312)
Q Consensus 183 ~q~v~~~l~~~a~~ 196 (312)
+|.+|+++......
T Consensus 297 ~q~vq~~la~~~~~ 310 (403)
T 3sf6_A 297 FQLTQQKLADMTLE 310 (403)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 99999997665543
No 62
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=99.39 E-value=3.7e-13 Score=129.39 Aligned_cols=105 Identities=21% Similarity=0.095 Sum_probs=80.9
Q ss_pred HHHHHHHhccccccccc--ccccCCCChhHhHHHHHHHHH-HccCcchHH---------------------Hhhhcc---
Q psy10338 198 REIQLMLLGVHNCNVFL--VSVSGGLELSVFDGCLVAEEL-AYGCTGIMT---------------------ALEASG--- 250 (312)
Q Consensus 198 ~~~~~~~~~~g~~~~~~--p~~~GG~g~~~~~~~~v~e~l-~~~~~~~~~---------------------~~~g~~--- 250 (312)
.++++.+.+.||.++.+ |++|||.+..........++. +..|+...+ +.+++.
T Consensus 89 ~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~t~~~~~~L~~~g~eqk~~~lp~l~sge~~p~ 168 (541)
T 3djl_A 89 HLLMQALCTNRVHNLAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSH 168 (541)
T ss_dssp HHHHHHHHHTTTTTGGGSTTCCTTHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHCCGGGGGGHHHHTCSCCCCC
T ss_pred HHHHHHHHhCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHcCHHHHHHHHHHHhCCCcccc
Confidence 45677889999999999 789998776665554444332 333332111 112444
Q ss_pred ----------cceeeecCCCCCCCcCCceeEEEEe-CCEEEEeeeeeeeeCCCcccEEEEEecc
Q psy10338 251 ----------LGAYCVTEPGAGSDVNGVKTKAVKK-GDEWILNGQKMWITNGGVANWQNRTRDF 303 (312)
Q Consensus 251 ----------~~~~a~tEp~~gsd~~~~~t~A~~~-~~g~~l~G~k~~vs~~~~ad~~~v~~~~ 303 (312)
+.++++|||++|||+.+++|+|+++ +|+|+|||+|+|+| +.+|||++|++.+
T Consensus 169 ~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~Ad~~lVlArt 231 (541)
T 3djl_A 169 LLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQSDAHLVLAQT 231 (541)
T ss_dssp SSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTSSEEEEEEEE
T ss_pred cccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-ccccCEEEEEEEE
Confidence 5789999999999999999999999 78999999999999 9999999998665
No 63
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=99.38 E-value=4.8e-13 Score=125.63 Aligned_cols=92 Identities=28% Similarity=0.364 Sum_probs=85.1
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
..+++|+++.++++++||||+||+++++|.. .||...+..++.+|+.+++.++|+++++++.+++|+++|++||+|+.+
T Consensus 244 ~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~-~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~ 322 (436)
T 2ix5_A 244 IPNKIGLRMVQNGDILLQNVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAA 322 (436)
T ss_dssp CCCBSSSTTSCEEEEEEEEEEEEGGGBCTTC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred cccccCCCcCCceeEEeccEEECHHHcCCcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhh
Confidence 5667899999999999999999999999876 689999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhh
Q psy10338 183 HQGMYLKIQYVSI 195 (312)
Q Consensus 183 ~q~v~~~l~~~a~ 195 (312)
+|.+|++++....
T Consensus 323 ~q~vq~~la~~~~ 335 (436)
T 2ix5_A 323 FQLNQQKLVQMLG 335 (436)
T ss_dssp SHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9999999665544
No 64
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=99.37 E-value=8.3e-13 Score=122.36 Aligned_cols=92 Identities=34% Similarity=0.505 Sum_probs=84.9
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
.++++|+++.+++++.||||+||.++++|.. .|+...+..++.+|+.+++.++|+++++++.+++|+++|++||+|+.+
T Consensus 204 ~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~-~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~ 282 (392)
T 1siq_A 204 IQGKFSLRASATGMIIMDGVEVPEENVLPGA-SSLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLAR 282 (392)
T ss_dssp CCCCSSSTTSCEEEEEEEEEEEEGGGBCTTC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred ccccccccCCceEEEEEccEEECHHHcCCcc-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhh
Confidence 4567899999999999999999999999876 689888899999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhh
Q psy10338 183 HQGMYLKIQYVSI 195 (312)
Q Consensus 183 ~q~v~~~l~~~a~ 195 (312)
+|.+|++++....
T Consensus 283 ~q~vq~~la~~~~ 295 (392)
T 1siq_A 283 NQLIQKKLADMLT 295 (392)
T ss_dssp SHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999999766544
No 65
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=99.37 E-value=5.9e-13 Score=125.21 Aligned_cols=101 Identities=23% Similarity=0.249 Sum_probs=90.5
Q ss_pred cccCCCCCCccCCcCCCcccEEEcceecCCCCccccCCccHH-HHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHh-hc
Q psy10338 97 NGHIPASEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFK-IAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALE-RK 174 (312)
Q Consensus 97 ~~~~P~~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~-~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~-R~ 174 (312)
|+.+-+.++++|+++.++++++||||+||.++++|.++.|+. +.+..++.+|+.+++.++|+++++++.+++|+++ |.
T Consensus 225 Gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~ 304 (439)
T 2c12_A 225 AYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTR 304 (439)
T ss_dssp GEEEEECCCBSSCTTCCCCEEEEEEEEEEGGGBCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred ceEeCCcccccccCCCCceEEEEccEEecHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcee
Confidence 344444678899999999999999999999999999999999 9999999999999999999999999999999997 78
Q ss_pred cCCCCcccchhhHHHHHHhhhHH
Q psy10338 175 AFGVPIAAHQGMYLKIQYVSIFE 197 (312)
Q Consensus 175 ~fg~~l~~~q~v~~~l~~~a~~~ 197 (312)
+||+|+.++|.+|++++......
T Consensus 305 ~~G~~i~~~q~vq~~la~~~~~~ 327 (439)
T 2c12_A 305 GGSKHIIEHQSVADKLIDCKIRL 327 (439)
T ss_dssp TSSSCGGGSHHHHHHHHHHHHHH
T ss_pred eCCeehhccHHHHHHHHHHHHHH
Confidence 99999999999999977655543
No 66
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=99.26 E-value=2.1e-12 Score=120.81 Aligned_cols=94 Identities=13% Similarity=0.119 Sum_probs=84.9
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccC--------Ccc-----HHHHHhhhhccChhHHHHHHHHHHHHHHHHHHH
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGE--------GAG-----FKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKY 169 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~--------g~G-----~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~y 169 (312)
.++++|+++.+++++.||||+||.++++|.+ +.| +.+.+..++.+|+.+++.++|+++++++.+++|
T Consensus 209 ~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g~g~~~~~~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~y 288 (422)
T 2jbr_A 209 NWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRPYFASGFSAVSLGIAERMIEAFKEK 288 (422)
T ss_dssp CCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTTTTSCTTCSSSSSCHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCcCCCCCCcEEEeeEEecHHHeecccccccCCCCcccccCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999975 666 777777888999999999999999999999999
Q ss_pred HHhhc--cCCCCcccchhhHHHHHHhhhH
Q psy10338 170 ALERK--AFGVPIAAHQGMYLKIQYVSIF 196 (312)
Q Consensus 170 a~~R~--~fg~~l~~~q~v~~~l~~~a~~ 196 (312)
+++|+ +||+|++++|.+|++++.....
T Consensus 289 a~~R~~~~fG~~i~~~q~vq~~la~~~~~ 317 (422)
T 2jbr_A 289 QRNRVRAYTGANVGLATPALMRIAESTHQ 317 (422)
T ss_dssp HTTCBCTTTCCBCTTCHHHHHHHHHHHHH
T ss_pred HhcCCCCCCCCccccCHHHHHHHHHHHHH
Confidence 99998 9999999999999997655543
No 67
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=99.22 E-value=5e-12 Score=117.10 Aligned_cols=94 Identities=21% Similarity=0.126 Sum_probs=83.0
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCcccc--------CC----ccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHH
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLG--------EG----AGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYA 170 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~--------~g----~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya 170 (312)
.++++|+++.+++++.||||+||.++++|. ++ .|+.+....+..+|+.+++.++|+++++++.+++|+
T Consensus 181 ~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~ya 260 (394)
T 2rfq_A 181 VWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTIHPTTISAPIVGMAYGAYDAHVEHQ 260 (394)
T ss_dssp CCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 578899999999999999999999999986 33 356666667888999999999999999999999999
Q ss_pred Hhhc---cCCCCcccchhhHHHHHHhhhH
Q psy10338 171 LERK---AFGVPIAAHQGMYLKIQYVSIF 196 (312)
Q Consensus 171 ~~R~---~fg~~l~~~q~v~~~l~~~a~~ 196 (312)
++|+ +||+|+.++|.+|++++.....
T Consensus 261 ~~R~~~~~fG~~i~~~q~vq~~la~~~~~ 289 (394)
T 2rfq_A 261 GKRVRAAFAGEKAKDDPFAKVRIAEASSD 289 (394)
T ss_dssp HHHHHHSCTTCGGGSCHHHHHHHHHHHHH
T ss_pred ccCCcCCCCCcccccCHHHHHHHHHHHHH
Confidence 9999 9999999999999997655543
No 68
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=99.22 E-value=3.1e-12 Score=119.31 Aligned_cols=94 Identities=15% Similarity=0.130 Sum_probs=83.3
Q ss_pred CCCCccCCcCCCcccEEEcceecCCCCcccc--------CC----ccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHH
Q psy10338 102 ASEQNMGQRASDTRGITFEDVRVPKENVLLG--------EG----AGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKY 169 (312)
Q Consensus 102 ~~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~--------~g----~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~y 169 (312)
+.++++|+++.+++++.||||+||.++++|. ++ .|+.+....++.+|+.+++.++|+++++++.+++|
T Consensus 197 ~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~y 276 (414)
T 2or0_A 197 DTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMDGRAQKEAGRPEPLFNMPYSCMFPLGITAAVIGITEGALACHIAV 276 (414)
T ss_dssp TCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHHSHHHHHHTCSCSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccCcccCCCcEEEccEEecHHHeeccccccccCCCccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999999999999999986 33 45666667788899999999999999999999999
Q ss_pred HHhhccC-CCCcccchhhHHHHHHhhh
Q psy10338 170 ALERKAF-GVPIAAHQGMYLKIQYVSI 195 (312)
Q Consensus 170 a~~R~~f-g~~l~~~q~v~~~l~~~a~ 195 (312)
+++|++| |+|+.++|.+|++++....
T Consensus 277 a~~R~~f~G~~i~~~q~vq~~la~~~~ 303 (414)
T 2or0_A 277 QKDRVAITGQKIKEDPYVLSAIGESAA 303 (414)
T ss_dssp HTTCBCTTSCBGGGCHHHHHHHHHHHH
T ss_pred HhcCCCCCCCccccCHHHHHHHHHHHH
Confidence 9999999 9999999999999765544
No 69
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=99.12 E-value=7.1e-11 Score=116.17 Aligned_cols=92 Identities=20% Similarity=0.242 Sum_probs=76.7
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccC------Ccc-----HHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHH
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGE------GAG-----FKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYAL 171 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~------g~G-----~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~ 171 (312)
..+++|+++.+++++.||||+||.+++||.. |.+ +.+....+..+|+.+++.++|.++++++.+++|++
T Consensus 226 ~~~k~Gl~g~~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~ 305 (661)
T 2ddh_A 226 IGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSA 305 (661)
T ss_dssp CCCCSSCTTCCCEEEEESSEEEEGGGBCCSSCEECTTCCEECCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCcceEEEeccEEECHHHhcCcccccCCCCceeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4568899999999999999999999999974 433 67888889999999999999999999999999999
Q ss_pred hhccCCC-------CcccchhhHHHHHHhh
Q psy10338 172 ERKAFGV-------PIAAHQGMYLKIQYVS 194 (312)
Q Consensus 172 ~R~~fg~-------~l~~~q~v~~~l~~~a 194 (312)
+|++||. |+.++|.+|+++....
T Consensus 306 ~R~qfg~~~~~~e~~i~~~q~vq~rLa~~~ 335 (661)
T 2ddh_A 306 VRRQSEIKQSEPEPQILDFQTQQYKLFPLL 335 (661)
T ss_dssp HCBCSCSSTTSCCCBGGGSHHHHHHHHHHH
T ss_pred hCcccCCCCCCccccccccHHHHHHHHHHH
Confidence 9999998 8999999999965443
No 70
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=99.10 E-value=8.7e-11 Score=112.91 Aligned_cols=90 Identities=22% Similarity=0.327 Sum_probs=83.9
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLLGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
..+++|+++.++++++|+||+ ++++|+++.||.+++..++.+|+.+++.++|+++++++.+++|+++|.+||+++.+
T Consensus 257 ~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~ 333 (541)
T 3djl_A 257 LKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQ 333 (541)
T ss_dssp ECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred ccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCCCchhh
Confidence 456889999999999999996 89999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhh
Q psy10338 183 HQGMYLKIQYVSI 195 (312)
Q Consensus 183 ~q~v~~~l~~~a~ 195 (312)
+|.+|+++.....
T Consensus 334 ~p~vq~~La~~~~ 346 (541)
T 3djl_A 334 QPLMRHVLSRMAL 346 (541)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999655444
No 71
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=99.07 E-value=5.9e-11 Score=116.79 Aligned_cols=91 Identities=23% Similarity=0.375 Sum_probs=80.9
Q ss_pred CCCccC---CcCCCcccEEEcceecCCCCcccc------CCccH------HHHHhhhhccChhHHHHHHHHHHHHHHHHH
Q psy10338 103 SEQNMG---QRASDTRGITFEDVRVPKENVLLG------EGAGF------KIAMDTFDKTRPPVAAGAVGLAQRCLDEAT 167 (312)
Q Consensus 103 ~~~~~g---~~~~~~~~v~f~dv~Vp~~~llG~------~g~G~------~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~ 167 (312)
...++| +++.+++.+.|+||+||.+++||. +|.|+ .+....++.+|+.+++.++|+++++++.++
T Consensus 225 ~~~~~G~~~~~g~~~~~v~fd~VrVP~~~lLg~~~~v~~~g~~~~~~~~~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~ 304 (659)
T 1w07_A 225 IGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIAT 304 (659)
T ss_dssp CCCBSSSSGGGGSCCEEEEESSEEEEGGGBCCSSEEECTTCCEEECSSCGGGCTTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCccccccCCCCceEEEeccEEECHHHhcCCcCccCCCCceecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456889 999999999999999999999996 66655 356778899999999999999999999999
Q ss_pred HHHHhhccCCC-------CcccchhhHHHHHHh
Q psy10338 168 KYALERKAFGV-------PIAAHQGMYLKIQYV 193 (312)
Q Consensus 168 ~ya~~R~~fg~-------~l~~~q~v~~~l~~~ 193 (312)
+|+++|++||. |+.++|.+|+++...
T Consensus 305 ~ya~~R~qfg~~~~~~e~pi~~~q~vq~rLa~~ 337 (659)
T 1w07_A 305 RYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPL 337 (659)
T ss_dssp HHHHHCBCSCC---CCCCBGGGSHHHHHHHHHH
T ss_pred HHHhcCcccCCCCCCcccchhccHHHHHHHHHH
Confidence 99999999998 899999999996443
No 72
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=99.03 E-value=3.1e-10 Score=105.03 Aligned_cols=90 Identities=19% Similarity=0.155 Sum_probs=79.4
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccc--cCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLL--GEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPI 180 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG--~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l 180 (312)
.++++|+++.++++++||||+||+++++| .++.|+......+..+|+.+++.++|+++++++.+++|++ ++|+
T Consensus 202 ~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i 276 (395)
T 3mxl_A 202 NWDGLGMRASGTLEVVFDRCPVRADELLERGPVGARRDAVLAGQTVSSITMLGIYAGIAQAARDIAVGFCA-----GRGG 276 (395)
T ss_dssp CCCBSSCTTSCCEEEEEEEEEECGGGCCEEEESSCCCTTHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TTCS
T ss_pred CchhcCCCCCCcceEEEcceEcCHHHhcCCCCCCccHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCC
Confidence 57889999999999999999999999999 7888887776666778999999999999999999999999 5589
Q ss_pred ccchhhHHHHHHhhhHH
Q psy10338 181 AAHQGMYLKIQYVSIFE 197 (312)
Q Consensus 181 ~~~q~v~~~l~~~a~~~ 197 (312)
.++|.+|+++.......
T Consensus 277 ~~~q~vq~~la~~~~~~ 293 (395)
T 3mxl_A 277 EPRAGARALVAGLDTRL 293 (395)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 99999999976655543
No 73
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=99.02 E-value=4.8e-10 Score=106.29 Aligned_cols=58 Identities=14% Similarity=0.078 Sum_probs=49.4
Q ss_pred HhhhcccceeeecCCCCC--------CCcCCceeEEE-EeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 245 ALEASGLGAYCVTEPGAG--------SDVNGVKTKAV-KKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 245 ~~~g~~~~~~a~tEp~~g--------sd~~~~~t~A~-~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
+..|..+.++++|||++| ||+. +.|+++ +++|||+|||+|+|+|| ..||+++|+++++
T Consensus 133 l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~ 199 (481)
T 2yyk_A 133 LRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSIL 199 (481)
T ss_dssp HHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSC
T ss_pred HHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecC
Confidence 456788899999999976 6764 666664 78999999999999999 9999999997765
No 74
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=99.01 E-value=1.8e-09 Score=106.22 Aligned_cols=57 Identities=30% Similarity=0.433 Sum_probs=52.6
Q ss_pred hcccceeeecCCCCCCCcCCceeEEEEe--CCEEEEe-----eeeeeeeC-CCcccEEEEEeccC
Q psy10338 248 ASGLGAYCVTEPGAGSDVNGVKTKAVKK--GDEWILN-----GQKMWITN-GGVANWQNRTRDFR 304 (312)
Q Consensus 248 g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~l~-----G~k~~vs~-~~~ad~~~v~~~~~ 304 (312)
|+.++|+++|||++|||+.+++|+|+++ +|+|+|| |+|.|||| +.+|||++|++.+.
T Consensus 130 Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~~ 194 (661)
T 2ddh_A 130 LEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLI 194 (661)
T ss_dssp TSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSSTTSEECCTTTTTTCSEEEEEEEEE
T ss_pred CCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEEEcCCCCCeEEEecCCCcccCCEEEEEEEEc
Confidence 6677899999999999999999999998 7899999 99999999 88999999996554
No 75
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=98.99 E-value=4.9e-10 Score=106.40 Aligned_cols=60 Identities=15% Similarity=0.048 Sum_probs=51.1
Q ss_pred HHhhhcccceeeecCCCCC--------CCc-CCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 244 TALEASGLGAYCVTEPGAG--------SDV-NGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 244 ~~~~g~~~~~~a~tEp~~g--------sd~-~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
.+..|..++++++|||+++ ||+ ..++ +|++++|||+|||+|+|+||+..||+++|+++++
T Consensus 137 ~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad~~iV~art~ 205 (490)
T 1u8v_A 137 YIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSHEHIIMPTIA 205 (490)
T ss_dssp HHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCSEEEECCSSC
T ss_pred HHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccCEEEEEEecC
Confidence 3456888999999999874 775 4455 8999999999999999999999999999997654
No 76
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=98.96 E-value=8.8e-10 Score=103.46 Aligned_cols=87 Identities=24% Similarity=0.287 Sum_probs=74.2
Q ss_pred CCCccCCcCCCcccEEEcceecCCCCccc--cCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCc
Q psy10338 103 SEQNMGQRASDTRGITFEDVRVPKENVLL--GEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPI 180 (312)
Q Consensus 103 ~~~~~g~~~~~~~~v~f~dv~Vp~~~llG--~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l 180 (312)
.++++|+++.++++|+||||+||.++++| .++.|+......+..+|+.+++.++|+++++++.+++|++ ++++
T Consensus 213 ~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i 287 (439)
T 3m9v_A 213 NWDGLGMRASGTVDIVFDDCPIPADHVLMRDPVGARNDAVLAGQTVSSVSVLGVYVGVAQAAYDTAVAALE-----RRPE 287 (439)
T ss_dssp CCCCSSCTTSCCEEEEEEEEEECGGGEEECCC--CCCGGGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TCSS
T ss_pred CcccCCcCCCCceeEEEeeeEcCHHHccCCCCCCchHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCC
Confidence 56789999999999999999999999999 7788876665556668999999999999999999999999 4589
Q ss_pred ccchhhHHHHHHhh
Q psy10338 181 AAHQGMYLKIQYVS 194 (312)
Q Consensus 181 ~~~q~v~~~l~~~a 194 (312)
.++|.+|+++....
T Consensus 288 ~~~~~vq~~la~~~ 301 (439)
T 3m9v_A 288 PPQAAALTLVAEID 301 (439)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999999854433
No 77
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=98.91 E-value=1.7e-09 Score=102.85 Aligned_cols=59 Identities=17% Similarity=0.112 Sum_probs=49.1
Q ss_pred HHhhhcccceeeecCCCC--------CCCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccC
Q psy10338 244 TALEASGLGAYCVTEPGA--------GSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFR 304 (312)
Q Consensus 244 ~~~~g~~~~~~a~tEp~~--------gsd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~ 304 (312)
.+..|..+.++|+|||++ |||+ .++++ .+++|||+|||+|.||||+..||+++|++.++
T Consensus 141 ~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~~-~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a~t~ 207 (515)
T 3hwc_A 141 LLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRIV-EKTDDGIIVNGVKAVGTGIAFGDYMHIGCLYR 207 (515)
T ss_dssp HHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEEE-EECSSEEEEEEEEEEEESGGGCSEEEECCCCC
T ss_pred HHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEEE-EEECCEEEEEEEEEEECCccccCEEEEEEEec
Confidence 345678888999999986 5787 66654 45689999999999999999999999997663
No 78
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=98.43 E-value=2.3e-07 Score=87.82 Aligned_cols=90 Identities=18% Similarity=0.126 Sum_probs=72.9
Q ss_pred CCcC-CCcccEEEcceecCCCCcc--ccCCccHHHH--HhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q psy10338 108 GQRA-SDTRGITFEDVRVPKENVL--LGEGAGFKIA--MDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAA 182 (312)
Q Consensus 108 g~~~-~~~~~v~f~dv~Vp~~~ll--G~~g~G~~~~--~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~ 182 (312)
|.+. .++++|+||||+||.+++| |+++.|+... +..++.+|+..++..+|.++.++..+..++.. |+ +.+
T Consensus 240 g~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~g--i~~ 314 (481)
T 2yyk_A 240 SSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGATGALNHMAHQVVALKTAKTEAFLGVAALMAEG---IG--ADV 314 (481)
T ss_dssp TTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TT--GGG
T ss_pred cccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--hhh
Confidence 4443 5678899999999999998 6777777655 67888999999999999999999999988875 44 999
Q ss_pred chhhHHHHHHhhhHHHHHHH
Q psy10338 183 HQGMYLKIQYVSIFEREIQL 202 (312)
Q Consensus 183 ~q~v~~~l~~~a~~~~~~~~ 202 (312)
+|.||++++.........+.
T Consensus 315 ~q~vq~~laem~~~leaar~ 334 (481)
T 2yyk_A 315 YGHVQEKIAEIIVYLEAMRA 334 (481)
T ss_dssp SHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 99999998877766544433
No 79
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=98.11 E-value=4.3e-06 Score=79.31 Aligned_cols=84 Identities=12% Similarity=0.105 Sum_probs=64.4
Q ss_pred CCcccEEEcceecCCCCcc--ccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHH
Q psy10338 112 SDTRGITFEDVRVPKENVL--LGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLK 189 (312)
Q Consensus 112 ~~~~~v~f~dv~Vp~~~ll--G~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~ 189 (312)
..+++|+||||+||.++++ |.++.|+.+++..+.+.|+.+++..+|.++.++..+...... ++ +.++|.||++
T Consensus 255 ~~~~~v~FddV~VP~e~vl~~g~~~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~---~g--i~~~q~vq~~ 329 (490)
T 1u8v_A 255 GQEALVVFDNVFIPNDRIFLCQEYDFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAADY---NG--AQKASHVKDK 329 (490)
T ss_dssp CCCEEEEEEEEEEEGGGEEEESCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HT--CTTCHHHHHH
T ss_pred CceEEEEECceEeCHHHccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--chhcHHHHHH
Confidence 5668899999999999998 778889998888888899888776666666655555443322 33 8999999999
Q ss_pred HHHhhhHHHHH
Q psy10338 190 IQYVSIFEREI 200 (312)
Q Consensus 190 l~~~a~~~~~~ 200 (312)
++.........
T Consensus 330 laem~~~leaa 340 (490)
T 1u8v_A 330 LIEMTHLNETL 340 (490)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88776655443
No 80
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=98.02 E-value=1.6e-05 Score=75.59 Aligned_cols=83 Identities=12% Similarity=0.021 Sum_probs=69.8
Q ss_pred cccEEEcceecCCCCcc--ccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHH
Q psy10338 114 TRGITFEDVRVPKENVL--LGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQ 191 (312)
Q Consensus 114 ~~~v~f~dv~Vp~~~ll--G~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~ 191 (312)
++.|+||||+||.|+++ |+++.++.+.+..++..|...++..++.++.++..+..+++.. | +.++|.||++++
T Consensus 254 da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~ae~~---G--i~~fq~Vq~kLa 328 (517)
T 4g5e_A 254 DGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHYHALIRQSVRAELMAGLAILITEHI---G--TNKIPAVQTRVA 328 (517)
T ss_dssp EEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T--CTTSHHHHHHHH
T ss_pred ceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---C--CcccHHHHHHHH
Confidence 46799999999999987 8888898888888999998888888898888888888888643 3 889999999998
Q ss_pred HhhhHHHHHH
Q psy10338 192 YVSIFEREIQ 201 (312)
Q Consensus 192 ~~a~~~~~~~ 201 (312)
.........+
T Consensus 329 Em~~~~E~~r 338 (517)
T 4g5e_A 329 KLIGFHQAML 338 (517)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777655443
No 81
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=97.92 E-value=1.3e-05 Score=76.14 Aligned_cols=82 Identities=15% Similarity=0.105 Sum_probs=55.4
Q ss_pred cccEEEcceecCCCCcc--ccCCccHHHHHhhhhccChhHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhHHHHH
Q psy10338 114 TRGITFEDVRVPKENVL--LGEGAGFKIAMDTFDKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQGMYLKIQ 191 (312)
Q Consensus 114 ~~~v~f~dv~Vp~~~ll--G~~g~G~~~~~~~l~~~R~~~aa~~~G~~~~~l~~a~~ya~~R~~fg~~l~~~q~v~~~l~ 191 (312)
+++|+||||+||.++++ |+++.||.+++..+...+.......++.+..++..+..++. .|| +.++|.||++++
T Consensus 253 ~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~~~~~~~r~~~~~~~~~a~~~lG~A~~~~e---~~g--I~~fQ~Vq~kLA 327 (515)
T 3hwc_A 253 DSTTVFDNVFIPWEQVFHIGNPEHAKLYPQRIFDWVHYHILIRQVLRAELIVGLAILITE---HIG--TSKLPTVSARVA 327 (515)
T ss_dssp EEEEEEEEEEEEGGGEEEESCTTGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHT--CTTSHHHHHHHH
T ss_pred eEEEEECceEECHHHccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcC--CcccHHHHHHHH
Confidence 67899999999999999 88999998775554444321223334444444444444433 234 999999999988
Q ss_pred HhhhHHHHH
Q psy10338 192 YVSIFEREI 200 (312)
Q Consensus 192 ~~a~~~~~~ 200 (312)
.........
T Consensus 328 em~~~lEaa 336 (515)
T 3hwc_A 328 KLVAFHLAM 336 (515)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777665443
No 82
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=97.61 E-value=4e-05 Score=72.90 Aligned_cols=59 Identities=22% Similarity=0.223 Sum_probs=42.6
Q ss_pred ccceeeecCCCCC--------CCcCCceeEEEEeCCEEEEeeeeeeeeCCCcccEEEEEeccCCCCCCC
Q psy10338 250 GLGAYCVTEPGAG--------SDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWQNRTRDFRYEKPGH 310 (312)
Q Consensus 250 ~~~~~a~tEp~~g--------sd~~~~~t~A~~~~~g~~l~G~k~~vs~~~~ad~~~v~~~~~~~~~~~ 310 (312)
...+.++++|... .|+ .++ ..++++|||+|||.|.|+||+..||+++|+..++++.+++
T Consensus 148 L~~~~a~~dPk~dRs~~~~~q~d~-~l~-Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~~~d 214 (517)
T 4g5e_A 148 LNCAPQFVDPQMDRSNPDAQQRSP-GLR-VIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGIPGD 214 (517)
T ss_dssp CCEEEECCCCCC-----------C-BCE-EEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTCCGG
T ss_pred ceeeeeeeCCCCCCCCCchhcCCC-ceE-EEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCCCcc
Confidence 3457788888531 122 132 3566789999999999999999999999987776665543
No 83
>3hhg_A Transcriptional regulator, LYSR family; transcription factor, structur genomics, oxford protein production facility, OPPF; 3.20A {Neisseria meningitidis serogroup B}
Probab=26.92 E-value=77 Score=26.18 Aligned_cols=61 Identities=15% Similarity=0.169 Sum_probs=51.2
Q ss_pred cCCChhhhhhhhhhHHHHHHHHHHHHHHhhhcCcccccccccCCCCCHHHHHHHHHHHHhhhh
Q psy10338 5 DKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQALARKFCRE 67 (312)
Q Consensus 5 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~m~~~l~~~~~~l~~~~~~f~~~ 67 (312)
++..+..||..+|.+..++++. .++.++++|.++.....=.+.+|++-+.|.+.+++.+..
T Consensus 16 ~~gs~t~AA~~L~isq~avS~~--i~~LE~~lg~~Lf~R~~~~~~lT~~G~~l~~~a~~il~~ 76 (306)
T 3hhg_A 16 ESGSFSRAAEQLAMANSAVSRI--VKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQE 76 (306)
T ss_dssp HSSSHHHHHHHHTCCHHHHHHH--HHHHHHHHTSCCEETTSSSCEECHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHhCCCHHHHHHH--HHHHHHHhCCeeEeecCCCeeECHhHHHHHHHHHHHHHH
Confidence 5667889999999999999876 468899999999987776778999998888888887753
No 84
>1ixc_A CBNR, LYSR-type regulatory protein; long alpha helix connecting DNA binding and regulatory domai binding protein; 2.20A {Cupriavidus necator} SCOP: a.4.5.37 c.94.1.1 PDB: 1iz1_A
Probab=23.04 E-value=1e+02 Score=25.21 Aligned_cols=60 Identities=17% Similarity=0.136 Sum_probs=45.7
Q ss_pred cCCChhhhhhhhhhHHHHHHHHHHHHHHhhhcCcccccccccCCCCCHHHHHHHHHHHHhhh
Q psy10338 5 DKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQALARKFCR 66 (312)
Q Consensus 5 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~m~~~l~~~~~~l~~~~~~f~~ 66 (312)
++..+..||..+|.+..+++... ++.++++|.++.....-...+|++-+.|.+.+++.+.
T Consensus 14 ~~gs~s~AA~~L~isq~avS~~i--~~LE~~lg~~Lf~R~~~~~~lT~~G~~l~~~a~~~l~ 73 (294)
T 1ixc_A 14 EAGNMAAAAKRLHVSQPPITRQM--QALEADLGVVLLERSHRGIELTAAGHAFLEDARRILE 73 (294)
T ss_dssp HHSSHHHHHHHHTCCHHHHHHHH--HHHHHHHTSCCBC-----CCBCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHhCCCcchHHHHH--HHHHHHHCCEEEEeCCCCeeECHhHHHHHHHHHHHHH
Confidence 45677889999999999988764 6788999999998776677899998888877777665
No 85
>3szp_A Transcriptional regulator, LYSR family; winged helix-turn helix, DNA-binding, transcription factor; 2.20A {Vibrio cholerae} PDB: 3t1b_B
Probab=20.76 E-value=74 Score=25.90 Aligned_cols=61 Identities=5% Similarity=0.034 Sum_probs=50.5
Q ss_pred cCCChhhhhhhhhhHHHHHHHHHHHHHHhhhcCcccccccccCCCCCHHHHHHHHHHHHhhhh
Q psy10338 5 DKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQALARKFCRE 67 (312)
Q Consensus 5 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~m~~~l~~~~~~l~~~~~~f~~~ 67 (312)
++..+..||..++.+..+++.. .++.++++|.++.....=.+.+|++-+.+.+.+++.+..
T Consensus 14 ~~~s~t~AA~~L~isq~avS~~--i~~LE~~lg~~Lf~R~~~~~~lT~~G~~l~~~a~~~l~~ 74 (291)
T 3szp_A 14 ENGSYTSTSKKTMIPVATITRR--IQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLER 74 (291)
T ss_dssp HHSSHHHHHHHHTCCHHHHHHH--HHHHHHHHTCCCEEEETTEEEECHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHhCCCHHHHHHH--HHHHHHHhCCceEeecCCCcccCHhHHHHHHHHHHHHHH
Confidence 4567788999999999998876 467899999999987666677899999888888887753
No 86
>3fxq_A LYSR type regulator of TSAMBCD; transcriptional regulator, LTTR, TSAR, WHTH, DNA- transcription, transcription regulation; 1.85A {Comamonas testosteroni} PDB: 3fxr_A* 3fxu_A* 3fzj_A 3n6t_A 3n6u_A*
Probab=20.66 E-value=86 Score=26.03 Aligned_cols=61 Identities=21% Similarity=0.155 Sum_probs=49.9
Q ss_pred cCCChhhhhhhhhhHHHHHHHHHHHHHHhhhcCcccccccccCCCCCHHHHHHHHHHHHhhhh
Q psy10338 5 DKTRPPVAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQVFYSELNETQQEFQALARKFCRE 67 (312)
Q Consensus 5 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~m~~~l~~~~~~l~~~~~~f~~~ 67 (312)
++..+..||..+|.+..+++.. .++.++++|.++.....=.+.+|++-+.|.+.+++.+..
T Consensus 15 ~~gs~t~AA~~L~isq~avS~~--i~~LE~~lg~~Lf~R~~r~~~lT~~G~~l~~~a~~~l~~ 75 (305)
T 3fxq_A 15 EVGSLRAAAQLLHLSQPALSAA--IQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTE 75 (305)
T ss_dssp HHSCHHHHHHHTTCCHHHHHHH--HHHHHHHHTSCSEEECSSSEEECHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHhCCCHHHHHHH--HHHHHHHhCCeeEEecCCCccCCHhHHHHHHHHHHHHHH
Confidence 4567788999999999998876 467889999999887666678899988888888877753
Done!