BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10339
(476 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0P569|NUCB1_BOVIN Nucleobindin-1 OS=Bos taurus GN=NUCB1 PE=2 SV=1
Length = 474
Score = 191 bits (485), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 112/267 (41%), Positives = 166/267 (62%), Gaps = 10/267 (3%)
Query: 80 GIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTE 139
G+ Y+RYL EV+ LE+D FR+KL+ A+ DI+SGK+++EL++V+H VR+KLDELKR E
Sbjct: 45 GLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQE 104
Query: 140 LDRLRELAKRQYELSEGKAVP-------DAPGHVDHNNPHSFEINDLHKLIVQVTNDLAE 192
+ RLR L K + + + + H+D N H+FE DL LI T DLA+
Sbjct: 105 VSRLRMLLKAKMDAQQEPNIQLDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQ 164
Query: 193 ADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGS 252
D E FK YE+ K +ER + L + +++++E +K E+ R+ + + V+ PGS
Sbjct: 165 YDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREH---PKVNVPGS 221
Query: 253 KKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQN 312
+ QL+EVW+E D + FNPK FF +HD++ + V DE+E++ LF KEL+K+Y +
Sbjct: 222 QAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEDD 281
Query: 313 DLMERAEEMERMREHVFKEADVNRDHL 339
D+ E EE RMREHV K D N+D L
Sbjct: 282 DMREMEEERLRMREHVMKNVDTNQDRL 308
>sp|Q9JI85|NUCB2_RAT Nucleobindin-2 OS=Rattus norvegicus GN=Nucb2 PE=2 SV=1
Length = 420
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 170/268 (63%), Gaps = 14/268 (5%)
Query: 80 GIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTE 139
G+ Y+ YL +V+E LE+DP FR+KL+ A +IRSG+++QEL+ V+H+VR++LDELKR E
Sbjct: 51 GLYYDEYLKQVIEVLETDPHFREKLQKADIEEIRSGRLSQELDLVSHKVRTRLDELKRQE 110
Query: 140 LDRLRELAKRQYELSEGKA-----VPDAPGHVDHNNPHSFEINDLHKLIVQVTNDLAEAD 194
+ RLR L K + + + + H++H NP +FE DL LI T DL + D
Sbjct: 111 VGRLRMLIKAKLDALQDTGMNHHLLLKQFEHLNHQNPDTFESKDLDMLIKAATADLEQYD 170
Query: 195 RKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKK 254
R R E FK+YE+ K +ER + L +++++++E K AE RK + D V+HPGSK
Sbjct: 171 RTRHEEFKKYEMMKEHERREYLKTLSEEKRKEEEAKFAEMKRKHE---DHPKVNHPGSKD 227
Query: 255 QLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDL 314
QL+EVW+E D + +F+PK FF +HD++ + DE+E++ LF KELDK+Y PQN
Sbjct: 228 QLKEVWEETDGLDPNDFDPKTFFKLHDVNNDGFLDEQELEALFTKELDKVYN---PQNAE 284
Query: 315 MERAEEME---RMREHVFKEADVNRDHL 339
+ E E RMREHV E D N+D L
Sbjct: 285 DDMIEMEEERLRMREHVMNEIDNNKDRL 312
>sp|P81117|NUCB2_MOUSE Nucleobindin-2 OS=Mus musculus GN=Nucb2 PE=1 SV=2
Length = 420
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 200/336 (59%), Gaps = 31/336 (9%)
Query: 80 GIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTE 139
G+ Y+ YL +V+E LE+DP FR+KL+ A +IRSG+++QEL+ V+H+VR++LDELKR E
Sbjct: 51 GLYYDEYLKQVIEVLETDPHFREKLQKADIEEIRSGRLSQELDLVSHKVRTRLDELKRQE 110
Query: 140 LDRLRELAKRQYELSEGKA-----VPDAPGHVDHNNPHSFEINDLHKLIVQVTNDLAEAD 194
+ RLR L K + + + + H++H NP++FE DL LI T DL + D
Sbjct: 111 VGRLRMLIKAKLDALQDTGMNHHLLLKQFEHLNHQNPNTFESRDLDMLIKAATADLEQYD 170
Query: 195 RKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKK 254
R R E FK+YE+ K +ER + L +++++++E K E RK + D V+HPGSK
Sbjct: 171 RTRHEEFKKYEMMKEHERREYLKTLSEEKRKEEESKFEEMKRKHE---DHPKVNHPGSKD 227
Query: 255 QLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDL 314
QL+EVW+E D + +F+PK FF +HD++ + DE+E++ LF +EL+K+Y PQN
Sbjct: 228 QLKEVWEETDGLDPNDFDPKTFFKLHDVNNDGFLDEQELEALFTRELEKVYN---PQNAE 284
Query: 315 MERAEEME---RMREHVFKEADVNRDHLDG---------------NHVWDEEEVKMLFLK 356
+ E E RMREHV E D N+D L W+ + + LF +
Sbjct: 285 DDMIEMEEERLRMREHVMSEIDNNKDRLVTLEEFLRATEKKEFLEPDSWETLDQQQLFTE 344
Query: 357 ELDKMYKE--GMPQNDLMERAEEMERMREHVFKEAD 390
+ K Y+ + +N+L +RAEE+++ +E + ++ D
Sbjct: 345 DELKEYESIIAIQENELKKRAEELQKQKEDLQRQHD 380
>sp|Q63083|NUCB1_RAT Nucleobindin-1 OS=Rattus norvegicus GN=Nucb1 PE=1 SV=1
Length = 459
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 171/283 (60%), Gaps = 16/283 (5%)
Query: 67 HHEGGNGNMAEELGIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNH 126
H E + G+ Y+RYL EV+ LE+D FR+KL+ A+ DI+SGK++QEL++V+H
Sbjct: 34 HQEDNQATETPDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSQELDFVSH 93
Query: 127 QVRSKLDELKRTELDRLRELAKRQYELSEGKAVPDAPG----------HVDHNNPHSFEI 176
VR+KLDELKR E+ RLR L K + + K P+ H+D N H+FE
Sbjct: 94 NVRTKLDELKRQEVSRLRMLLKAKMD---AKQEPNLQVDHMNLLKQFEHLDPQNQHTFEA 150
Query: 177 NDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIR 236
DL LI T DLA+ D E FK YE+ K +ER + L + +++++E +K E+ R
Sbjct: 151 RDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAERKLQEQQR 210
Query: 237 KRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKML 296
+ + + V+ PGS+ QL+EVW+E D + FNPK FF +HD++ + V DE+E++ L
Sbjct: 211 RHREH---PKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEAL 267
Query: 297 FLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHL 339
F KEL+K+Y ++D+ E EE RMREHV K D N+D L
Sbjct: 268 FTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRL 310
>sp|Q02819|NUCB1_MOUSE Nucleobindin-1 OS=Mus musculus GN=Nucb1 PE=1 SV=2
Length = 459
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 170/281 (60%), Gaps = 16/281 (5%)
Query: 69 EGGNGNMAEELGIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQV 128
E + G+ Y+RYL EV+ LE+D FR+KL+ A+ DI+SGK++QEL++V+H V
Sbjct: 36 EDSQATETPDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSQELDFVSHNV 95
Query: 129 RSKLDELKRTELDRLRELAKRQYELSEGKAVPDAPG----------HVDHNNPHSFEIND 178
R+KLDELKR E+ RLR L K + + K P+ H+D N H+FE D
Sbjct: 96 RTKLDELKRQEVSRLRMLLKAKMD---AKQEPNLQVDHMNLLKQFEHLDPQNQHTFEARD 152
Query: 179 LHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKR 238
L LI T DLA+ D E FK YE+ K +ER + L + +++++E +K E+ R+
Sbjct: 153 LELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAERKLQEQQRRH 212
Query: 239 KSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFL 298
+ + V+ PGS+ QL+EVW+E D + FNPK FF +HD++ + V DE+E++ LF
Sbjct: 213 REH---PKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFT 269
Query: 299 KELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHL 339
KEL+K+Y ++D+ E EE RMREHV K D N+D L
Sbjct: 270 KELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRL 310
>sp|Q02818|NUCB1_HUMAN Nucleobindin-1 OS=Homo sapiens GN=NUCB1 PE=1 SV=4
Length = 461
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 168/267 (62%), Gaps = 10/267 (3%)
Query: 80 GIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTE 139
G+ Y+RYL EV++ LE+D FR+KL+ A+ DI+SGK+++EL++V+H VR+KLDELKR E
Sbjct: 48 GLYYHRYLQEVIDVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQE 107
Query: 140 LDRLRELAKRQYELSEGKAVP-------DAPGHVDHNNPHSFEINDLHKLIVQVTNDLAE 192
+ RLR L K + + + V H+D N H+FE DL LI T DLA+
Sbjct: 108 VSRLRMLLKAKMDAEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQ 167
Query: 193 ADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGS 252
D E FK YE+ K +ER + L + +++++E +K E+ R+ + + V+ PGS
Sbjct: 168 YDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREH---PKVNVPGS 224
Query: 253 KKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQN 312
+ QL+EVW+E D + FNPK FF +HD++ + V DE+E++ LF KEL+K+Y ++
Sbjct: 225 QAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEED 284
Query: 313 DLMERAEEMERMREHVFKEADVNRDHL 339
D+ E EE RMREHV K D N+D L
Sbjct: 285 DMREMEEERLRMREHVMKNVDTNQDRL 311
>sp|Q5R4U1|NUCB1_PONAB Nucleobindin-1 OS=Pongo abelii GN=NUCB1 PE=2 SV=1
Length = 463
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/267 (41%), Positives = 168/267 (62%), Gaps = 10/267 (3%)
Query: 80 GIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTE 139
G+ Y+RYL EV++ LE+D FR+KL+ A+ DI+SGK+++EL++V+H VR+KLDELKR E
Sbjct: 48 GLYYHRYLQEVIDVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQE 107
Query: 140 LDRLRELAKRQYELSEGKAVP-------DAPGHVDHNNPHSFEINDLHKLIVQVTNDLAE 192
+ RLR L K + + + V H+D N H+FE DL LI T DLA+
Sbjct: 108 VSRLRMLLKAKMDAEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQ 167
Query: 193 ADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGS 252
D E FK YE+ K +ER + L + +++++E ++ E+ R+ + + V+ PGS
Sbjct: 168 YDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAERRLEEQQRRHREH---PKVNVPGS 224
Query: 253 KKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQN 312
+ QL+EVW+E D + FNPK FF +HD++ + V DE+E++ LF KEL+K+Y ++
Sbjct: 225 QAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEED 284
Query: 313 DLMERAEEMERMREHVFKEADVNRDHL 339
D+ E EE RMREHV K D N+D L
Sbjct: 285 DMREMEEERLRMREHVMKNVDTNQDRL 311
>sp|P80303|NUCB2_HUMAN Nucleobindin-2 OS=Homo sapiens GN=NUCB2 PE=1 SV=2
Length = 420
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 170/265 (64%), Gaps = 8/265 (3%)
Query: 80 GIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTE 139
G+ Y+ YL +V++ LE+D FR+KL+ A +I+SG++++EL+ V+H VR+KLDELKR E
Sbjct: 51 GLYYDEYLKQVIDVLETDKHFREKLQKADIEEIKSGRLSKELDLVSHHVRTKLDELKRQE 110
Query: 140 LDRLRELAKRQYELSEG-----KAVPDAPGHVDHNNPHSFEINDLHKLIVQVTNDLAEAD 194
+ RLR L K + + + +A+ H++H NP FE DL LI T+DL D
Sbjct: 111 VGRLRMLIKAKLDSLQDIGMDHQALLKQFDHLNHLNPDKFESTDLDMLIKAATSDLEHYD 170
Query: 195 RKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKK 254
+ R E FK+YE+ K +ER + L + +++++E K E +K +++ V+HPGSK
Sbjct: 171 KTRHEEFKKYEMMKEHERREYLKTLNEEKRKEEESKFEEMKKKHENH---PKVNHPGSKD 227
Query: 255 QLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDL 314
QL+EVW+E D + +F+PK FF +HD++ + DE+E++ LF KEL+K+Y ++D+
Sbjct: 228 QLKEVWEETDGLDPNDFDPKTFFKLHDVNSDGFLDEQELEALFTKELEKVYDPKNEEDDM 287
Query: 315 MERAEEMERMREHVFKEADVNRDHL 339
+E EE RMREHV E D N+D L
Sbjct: 288 VEMEEERLRMREHVMSEVDTNKDRL 312
>sp|Q54VQ7|HDA22_DICDI Type-2 histone deacetylase 2 OS=Dictyostelium discoideum GN=hdaC
PE=2 SV=1
Length = 1704
Score = 39.3 bits (90), Expect = 0.075, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 66 EHHEGGNGNMAEELGIEYNRYLNEVVEALESDPEFRKKLE-NASEADIRSGKIAQELEYV 124
E+HE G + +E N + + AL + +++ LE N E +RS K++ E+E +
Sbjct: 840 ENHETA-GLIGKECCSTRNALIYSIEVALRAIADYQHDLEDNLMEESLRSNKVSTEIEQI 898
Query: 125 NHQVRSKLDEL---KRTELDRLRELAKRQYELSEGKAVPD 161
HQ+++ LDE+ K E++ L L+K + ++ +++ D
Sbjct: 899 EHQIKANLDEIHKFKYQEVELLDSLSKVRGAIAAHESIRD 938
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,872,431
Number of Sequences: 539616
Number of extensions: 8556689
Number of successful extensions: 39886
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 1231
Number of HSP's that attempted gapping in prelim test: 36273
Number of HSP's gapped (non-prelim): 3518
length of query: 476
length of database: 191,569,459
effective HSP length: 121
effective length of query: 355
effective length of database: 126,275,923
effective search space: 44827952665
effective search space used: 44827952665
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)