Query psy10339
Match_columns 476
No_of_seqs 327 out of 1195
Neff 4.9
Searched_HMMs 46136
Date Fri Aug 16 15:26:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10339.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10339hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3866|consensus 100.0 1.6E-89 3.4E-94 678.9 32.1 345 14-439 6-356 (442)
2 KOG0027|consensus 99.7 1.8E-17 3.9E-22 150.6 13.1 149 219-409 2-150 (151)
3 COG5126 FRQ1 Ca2+-binding prot 99.7 3E-16 6.4E-21 146.0 13.9 147 216-409 11-157 (160)
4 PTZ00183 centrin; Provisional 99.5 1.6E-13 3.5E-18 122.2 14.0 149 216-410 8-156 (158)
5 PTZ00184 calmodulin; Provision 99.5 2.9E-13 6.4E-18 118.6 13.7 145 218-408 4-148 (149)
6 KOG4223|consensus 99.5 1.3E-13 2.7E-18 139.5 11.3 186 227-448 79-285 (325)
7 KOG0044|consensus 99.5 5E-13 1.1E-17 128.0 12.4 132 252-410 45-177 (193)
8 KOG0028|consensus 99.4 2.2E-12 4.7E-17 119.7 13.1 146 218-409 26-171 (172)
9 KOG0034|consensus 99.3 3.4E-11 7.3E-16 115.0 15.8 149 219-410 27-177 (187)
10 KOG0027|consensus 99.3 9.2E-12 2E-16 113.3 9.5 106 325-451 10-132 (151)
11 PF13499 EF-hand_7: EF-hand do 99.1 5E-10 1.1E-14 87.5 7.1 64 326-406 3-66 (66)
12 KOG3866|consensus 99.0 3E-09 6.4E-14 107.7 11.2 156 161-367 125-283 (442)
13 KOG0030|consensus 99.0 1.3E-08 2.8E-13 93.0 13.1 146 218-408 4-151 (152)
14 PTZ00183 centrin; Provisional 98.9 1.9E-08 4.1E-13 89.5 13.3 127 274-436 20-153 (158)
15 KOG0031|consensus 98.9 2.9E-08 6.4E-13 92.1 14.2 65 324-409 102-166 (171)
16 COG5126 FRQ1 Ca2+-binding prot 98.9 4.4E-09 9.6E-14 98.3 9.0 103 324-448 21-136 (160)
17 KOG0028|consensus 98.9 5.9E-09 1.3E-13 97.1 8.1 105 324-449 34-151 (172)
18 cd05022 S-100A13 S-100A13: S-1 98.9 8.3E-09 1.8E-13 87.6 8.0 65 326-409 11-76 (89)
19 PTZ00184 calmodulin; Provision 98.9 3E-08 6.4E-13 86.9 11.6 126 274-435 14-146 (149)
20 KOG0037|consensus 98.7 1E-07 2.2E-12 92.7 10.9 146 226-427 58-208 (221)
21 cd05026 S-100Z S-100Z: S-100Z 98.7 3.7E-08 8.1E-13 83.6 7.0 67 326-408 13-81 (93)
22 cd05027 S-100B S-100B: S-100B 98.7 1.1E-07 2.3E-12 80.4 8.5 68 325-408 10-79 (88)
23 cd05031 S-100A10_like S-100A10 98.6 2.1E-07 4.6E-12 78.6 8.2 69 325-409 10-80 (94)
24 cd05023 S-100A11 S-100A11: S-1 98.6 2.7E-07 5.8E-12 78.2 8.3 68 325-408 11-80 (89)
25 cd05025 S-100A1 S-100A1: S-100 98.6 3E-07 6.4E-12 77.3 8.3 69 325-409 11-81 (92)
26 KOG0036|consensus 98.5 1E-06 2.2E-11 92.4 13.0 181 217-450 6-196 (463)
27 PF13499 EF-hand_7: EF-hand do 98.5 4.2E-07 9.2E-12 70.9 6.5 65 273-354 2-66 (66)
28 PLN02964 phosphatidylserine de 98.4 6.3E-07 1.4E-11 99.5 9.5 105 217-356 135-243 (644)
29 KOG0038|consensus 98.4 1.1E-06 2.3E-11 81.5 9.2 105 274-409 74-178 (189)
30 cd00052 EH Eps15 homology doma 98.4 7.6E-07 1.6E-11 68.8 6.6 59 327-408 3-61 (67)
31 cd05029 S-100A6 S-100A6: S-100 98.4 5.9E-07 1.3E-11 75.9 6.1 65 327-409 14-80 (88)
32 cd00213 S-100 S-100: S-100 dom 98.3 1.9E-06 4E-11 71.4 8.0 69 325-409 10-80 (88)
33 KOG4223|consensus 98.3 8.4E-07 1.8E-11 90.6 6.5 132 230-404 168-301 (325)
34 smart00027 EH Eps15 homology d 98.2 3.7E-06 8.1E-11 71.1 7.8 62 324-408 11-72 (96)
35 cd00252 SPARC_EC SPARC_EC; ext 98.2 2.7E-06 5.8E-11 75.7 7.1 61 323-408 48-108 (116)
36 KOG4251|consensus 98.2 2.3E-06 5E-11 84.9 6.7 140 272-435 141-307 (362)
37 PLN02964 phosphatidylserine de 98.2 6.4E-06 1.4E-10 91.6 10.1 102 272-410 144-245 (644)
38 KOG0044|consensus 98.1 1.5E-05 3.2E-10 76.9 10.2 128 274-437 29-175 (193)
39 PF13833 EF-hand_8: EF-hand do 98.1 2.9E-06 6.4E-11 64.0 4.3 52 342-408 2-53 (54)
40 cd05026 S-100Z S-100Z: S-100Z 98.1 1.3E-05 2.9E-10 68.0 8.3 69 273-357 12-82 (93)
41 cd05027 S-100B S-100B: S-100B 98.1 2E-05 4.3E-10 66.6 8.6 68 273-356 10-79 (88)
42 cd05030 calgranulins Calgranul 98.1 1.5E-05 3.2E-10 67.0 7.5 69 327-409 12-80 (88)
43 cd05025 S-100A1 S-100A1: S-100 97.9 5.6E-05 1.2E-09 63.5 8.6 68 273-356 11-80 (92)
44 cd05031 S-100A10_like S-100A10 97.9 5.3E-05 1.1E-09 64.0 7.5 68 273-356 10-79 (94)
45 PF00036 EF-hand_1: EF hand; 97.9 1.2E-05 2.5E-10 55.0 2.8 26 383-408 3-28 (29)
46 cd00051 EFh EF-hand, calcium b 97.9 3.1E-05 6.8E-10 56.6 5.3 60 326-406 3-62 (63)
47 KOG0031|consensus 97.9 0.00013 2.8E-09 68.3 10.4 108 325-457 34-154 (171)
48 smart00027 EH Eps15 homology d 97.8 4.5E-05 9.8E-10 64.5 6.6 69 219-299 4-72 (96)
49 cd00252 SPARC_EC SPARC_EC; ext 97.8 3.8E-05 8.2E-10 68.4 6.4 58 273-355 50-107 (116)
50 cd05022 S-100A13 S-100A13: S-1 97.8 4.8E-05 1E-09 64.7 6.6 66 273-357 10-76 (89)
51 KOG0034|consensus 97.8 6.8E-05 1.5E-09 72.0 7.7 69 274-356 107-175 (187)
52 PF00036 EF-hand_1: EF hand; 97.8 1.6E-05 3.4E-10 54.3 2.3 26 273-298 2-27 (29)
53 cd05024 S-100A10 S-100A10: A s 97.8 9.2E-05 2E-09 63.6 7.5 65 327-408 12-76 (91)
54 cd00052 EH Eps15 homology doma 97.8 8.1E-05 1.7E-09 57.4 6.6 60 274-356 2-61 (67)
55 KOG0377|consensus 97.8 0.00028 6E-09 75.1 12.4 118 273-407 466-614 (631)
56 cd00213 S-100 S-100: S-100 dom 97.8 0.00013 2.8E-09 60.4 8.1 68 273-356 10-79 (88)
57 KOG0036|consensus 97.7 0.0001 2.2E-09 77.7 7.8 128 324-471 15-153 (463)
58 cd00051 EFh EF-hand, calcium b 97.6 0.00023 5E-09 51.9 6.9 61 273-354 2-62 (63)
59 KOG0037|consensus 97.6 0.00057 1.2E-08 67.0 11.3 126 272-439 58-190 (221)
60 cd05023 S-100A11 S-100A11: S-1 97.6 0.00028 6E-09 59.8 7.7 68 273-356 11-80 (89)
61 KOG0030|consensus 97.6 0.00028 6.1E-09 65.0 7.9 109 325-455 13-138 (152)
62 PRK12309 transaldolase/EF-hand 97.5 0.00031 6.7E-09 74.4 8.6 53 322-408 333-385 (391)
63 KOG0041|consensus 97.5 0.00033 7.2E-09 68.1 7.5 63 325-408 101-163 (244)
64 PF13202 EF-hand_5: EF hand; P 97.3 0.0002 4.4E-09 47.2 2.8 23 384-406 3-25 (25)
65 KOG2562|consensus 97.3 0.0046 1E-07 66.4 13.8 221 160-436 142-378 (493)
66 cd05029 S-100A6 S-100A6: S-100 97.3 0.00097 2.1E-08 56.4 7.2 66 273-356 12-79 (88)
67 PF13202 EF-hand_5: EF hand; P 97.2 0.00024 5.3E-09 46.8 2.4 25 273-297 1-25 (25)
68 PF13833 EF-hand_8: EF-hand do 97.2 0.00034 7.3E-09 52.7 3.5 46 252-298 6-52 (54)
69 PRK12309 transaldolase/EF-hand 97.0 0.0042 9.1E-08 66.0 10.9 60 263-356 326-385 (391)
70 KOG4065|consensus 97.0 0.0016 3.5E-08 58.5 6.6 72 326-405 70-142 (144)
71 KOG2643|consensus 97.0 0.0071 1.5E-07 64.6 12.4 121 265-406 229-382 (489)
72 KOG0040|consensus 97.0 0.065 1.4E-06 64.3 20.3 108 326-447 2256-2372(2399)
73 PF14658 EF-hand_9: EF-hand do 96.9 0.0015 3.2E-08 53.1 4.8 62 327-408 2-64 (66)
74 PF13405 EF-hand_6: EF-hand do 96.9 0.00075 1.6E-08 46.0 2.5 26 273-298 2-27 (31)
75 cd05030 calgranulins Calgranul 96.7 0.0077 1.7E-07 50.6 7.9 68 273-356 10-79 (88)
76 PF12763 EF-hand_4: Cytoskelet 96.5 0.0011 2.3E-08 58.1 1.0 69 217-298 2-70 (104)
77 PF13405 EF-hand_6: EF-hand do 96.4 0.0035 7.6E-08 42.7 3.0 25 326-355 3-27 (31)
78 KOG2643|consensus 96.4 0.007 1.5E-07 64.7 6.6 134 277-438 205-347 (489)
79 KOG0041|consensus 95.8 0.018 3.8E-07 56.4 6.0 69 220-298 94-162 (244)
80 KOG0038|consensus 95.8 0.061 1.3E-06 50.5 9.1 97 235-356 81-177 (189)
81 PF10591 SPARC_Ca_bdg: Secrete 95.8 0.0038 8.3E-08 55.3 1.2 58 324-404 55-112 (113)
82 KOG4666|consensus 95.7 0.017 3.7E-07 60.0 5.8 100 273-409 261-360 (412)
83 KOG4251|consensus 95.7 0.013 2.9E-07 58.8 4.9 111 274-408 104-227 (362)
84 PF12763 EF-hand_4: Cytoskelet 95.6 0.037 8E-07 48.5 6.5 58 326-407 13-70 (104)
85 KOG0040|consensus 95.4 2.8 6.1E-05 51.3 22.5 234 78-406 2144-2396(2399)
86 KOG0377|consensus 95.3 0.043 9.4E-07 59.0 7.1 68 271-355 547-614 (631)
87 smart00054 EFh EF-hand, calciu 95.1 0.026 5.5E-07 34.9 3.1 25 384-408 4-28 (29)
88 cd05024 S-100A10 S-100A10: A s 95.1 0.12 2.6E-06 44.6 8.0 66 274-356 11-76 (91)
89 smart00054 EFh EF-hand, calciu 95.1 0.025 5.4E-07 35.0 3.0 26 273-298 2-27 (29)
90 PF14658 EF-hand_9: EF-hand do 95.1 0.067 1.5E-06 43.6 6.0 62 275-356 2-64 (66)
91 PF10591 SPARC_Ca_bdg: Secrete 94.5 0.027 5.8E-07 49.9 2.6 57 273-352 56-112 (113)
92 KOG2562|consensus 93.8 1.2 2.5E-05 48.5 13.6 68 326-405 354-421 (493)
93 KOG0046|consensus 93.6 0.16 3.6E-06 55.6 6.8 94 326-438 22-128 (627)
94 KOG1029|consensus 91.7 1 2.2E-05 51.7 10.0 67 219-298 10-76 (1118)
95 PF14788 EF-hand_10: EF hand; 90.4 0.29 6.2E-06 38.1 3.0 46 252-298 3-48 (51)
96 KOG4065|consensus 90.1 0.34 7.3E-06 44.0 3.6 71 275-352 71-141 (144)
97 PF14788 EF-hand_10: EF hand; 89.1 0.93 2E-05 35.3 4.9 26 383-408 24-49 (51)
98 KOG0751|consensus 86.2 3.6 7.7E-05 45.4 8.9 156 274-435 111-312 (694)
99 KOG0751|consensus 83.5 8.3 0.00018 42.7 10.2 67 267-356 67-136 (694)
100 KOG3555|consensus 82.8 0.99 2.1E-05 47.6 2.9 58 325-407 252-309 (434)
101 KOG3555|consensus 80.7 1.3 2.9E-05 46.7 3.0 61 271-356 250-310 (434)
102 KOG0169|consensus 79.5 10 0.00022 43.7 9.6 105 321-447 134-249 (746)
103 KOG1955|consensus 79.4 2.2 4.8E-05 46.9 4.2 69 218-298 224-292 (737)
104 KOG4578|consensus 78.4 1.6 3.5E-05 45.8 2.7 62 275-356 337-398 (421)
105 KOG0046|consensus 75.2 4.9 0.00011 44.6 5.4 72 216-298 10-84 (627)
106 PF11770 GAPT: GRB2-binding ad 73.8 2.3 5E-05 40.0 2.2 32 1-32 1-32 (158)
107 PF09279 EF-hand_like: Phospho 73.1 13 0.00029 30.2 6.4 63 327-409 4-70 (83)
108 KOG1955|consensus 72.7 6.9 0.00015 43.3 5.8 65 320-407 228-292 (737)
109 KOG1029|consensus 72.7 5.9 0.00013 45.8 5.4 68 219-298 189-256 (1118)
110 PF10731 Anophelin: Thrombin i 69.1 3.8 8.3E-05 33.0 2.2 27 12-38 1-27 (65)
111 KOG0035|consensus 68.8 11 0.00024 44.3 6.6 99 325-439 749-854 (890)
112 KOG4578|consensus 67.1 4.2 9.1E-05 42.8 2.6 65 324-408 334-398 (421)
113 PRK12750 cpxP periplasmic repr 65.8 1.3E+02 0.0027 28.8 15.4 53 171-234 100-152 (170)
114 PF07862 Nif11: Nitrogen fixat 61.4 14 0.00029 27.7 3.8 33 87-121 6-39 (49)
115 PF00404 Dockerin_1: Dockerin 53.0 12 0.00027 24.0 2.0 15 281-295 1-15 (21)
116 KOG0998|consensus 52.3 15 0.00032 43.3 4.0 152 219-407 123-344 (847)
117 KOG2243|consensus 49.0 22 0.00049 43.8 4.6 57 328-406 4062-4118(5019)
118 PF05042 Caleosin: Caleosin re 47.7 32 0.00069 33.2 4.8 54 383-436 99-165 (174)
119 KOG0042|consensus 47.7 19 0.00042 40.5 3.8 65 324-409 594-658 (680)
120 PF12728 HTH_17: Helix-turn-he 45.2 22 0.00048 26.3 2.7 30 425-454 1-30 (51)
121 PF08572 PRP3: pre-mRNA proces 42.1 37 0.00081 33.8 4.5 33 424-456 139-175 (223)
122 PF09325 Vps5: Vps5 C terminal 41.4 3.2E+02 0.007 26.1 12.5 52 174-225 170-221 (236)
123 PF09279 EF-hand_like: Phospho 41.4 35 0.00076 27.7 3.6 68 273-356 2-69 (83)
124 KOG1707|consensus 41.3 99 0.0021 35.2 8.0 30 322-356 314-343 (625)
125 PF06518 DUF1104: Protein of u 40.5 2.4E+02 0.0052 24.6 8.7 52 185-239 29-80 (93)
126 TIGR01764 excise DNA binding d 39.8 26 0.00057 24.8 2.3 30 425-454 1-30 (49)
127 PLN02952 phosphoinositide phos 39.8 2.7E+02 0.0059 31.8 11.3 97 284-410 13-112 (599)
128 PF07946 DUF1682: Protein of u 37.5 1.7E+02 0.0038 30.3 8.7 81 139-231 229-314 (321)
129 PF05042 Caleosin: Caleosin re 36.7 31 0.00066 33.4 2.8 72 266-354 93-164 (174)
130 KOG4347|consensus 36.4 28 0.00061 39.7 2.9 56 273-350 557-612 (671)
131 KOG2891|consensus 34.7 3.2E+02 0.0069 28.7 9.8 40 115-154 305-350 (445)
132 PF05777 Acp26Ab: Drosophila a 34.2 30 0.00065 29.6 2.1 24 12-35 1-24 (90)
133 cd07627 BAR_Vps5p The Bin/Amph 32.2 4.8E+02 0.01 25.3 11.5 48 175-222 151-198 (216)
134 cd04762 HTH_MerR-trunc Helix-T 32.1 52 0.0011 23.0 2.8 29 426-454 1-29 (49)
135 KOG0042|consensus 32.1 85 0.0018 35.7 5.6 90 198-298 563-656 (680)
136 TIGR03798 ocin_TIGR03798 bacte 32.0 50 0.0011 26.2 2.9 26 87-112 4-30 (64)
137 PF06518 DUF1104: Protein of u 31.7 1.4E+02 0.003 26.0 5.8 48 199-259 21-68 (93)
138 PF06991 Prp19_bind: Splicing 28.8 6.7E+02 0.014 25.9 11.4 32 203-234 135-166 (276)
139 KOG0169|consensus 28.3 4.1E+02 0.009 31.2 10.3 120 274-410 139-276 (746)
140 PRK10455 periplasmic protein; 27.8 2E+02 0.0043 27.2 6.7 57 170-237 92-148 (161)
141 KOG4666|consensus 27.5 83 0.0018 33.6 4.4 68 267-356 292-359 (412)
142 PF11815 DUF3336: Domain of un 26.4 1.1E+02 0.0024 28.2 4.7 61 396-456 23-92 (145)
143 cd04761 HTH_MerR-SF Helix-Turn 26.0 1E+02 0.0022 22.0 3.5 28 426-453 1-28 (49)
144 smart00422 HTH_MERR helix_turn 25.7 92 0.002 24.0 3.4 28 427-454 2-29 (70)
145 PF08838 DUF1811: Protein of u 24.6 1.1E+02 0.0024 27.2 4.0 58 214-280 2-64 (102)
146 PHA01632 hypothetical protein 23.0 1.2E+02 0.0026 24.4 3.5 28 424-451 26-53 (64)
147 PRK00753 psbL photosystem II r 22.9 1E+02 0.0022 22.8 2.8 27 3-29 5-31 (39)
148 PF10925 DUF2680: Protein of u 21.7 1.8E+02 0.004 23.2 4.4 31 422-452 29-59 (59)
149 PF05952 ComX: Bacillus compet 21.2 87 0.0019 25.1 2.4 22 87-108 2-23 (57)
150 PF14217 DUF4327: Domain of un 21.0 96 0.0021 25.7 2.7 24 436-459 5-28 (68)
151 cd06395 PB1_Map2k5 PB1 domain 20.7 4.2E+02 0.0091 22.9 6.5 63 396-458 22-89 (91)
152 CHL00038 psbL photosystem II p 20.7 1.3E+02 0.0028 22.2 3.0 23 7-29 8-30 (38)
No 1
>KOG3866|consensus
Probab=100.00 E-value=1.6e-89 Score=678.89 Aligned_cols=345 Identities=40% Similarity=0.699 Sum_probs=320.9
Q ss_pred hHHHHHHHHHHHHHHhhhccCCCCCCCCCcccchhhhhhhhcchhhhhcccCCCCCCCCCCCchhhhHHHHHHHHHHHHH
Q psy10339 14 LKLFYLTLCIIYLHQFINALPVQQKQPSPQRFADEEFDKMTANESINEINNNEHHEGGNGNMAEELGIEYNRYLNEVVEA 93 (476)
Q Consensus 14 ~~~~~~~l~~~~~~~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~rYl~evi~~ 93 (476)
..++||.|+++|++-++.|||+.+..+. +...+ +++.|.+.+. +||+||++||+|||+|
T Consensus 6 ~~l~l~~llvllll~av~avPl~~~a~~--------------~q~~~-----~~e~pate~p--dtGlyY~~YL~eVidv 64 (442)
T KOG3866|consen 6 MILPLVILLVLLLLDAVCAVPLRQQAEQ--------------AQAQD-----VQEQPATEDP--DTGLYYTKYLEEVIDV 64 (442)
T ss_pred hHHHHHHHHHHHHHhhhcCCcccccchh--------------hhhcc-----cccCCCCCCC--cccchHHHHHHHHHHH
Confidence 3467888999999999999999999853 11111 3444555544 9999999999999999
Q ss_pred HhhChHHHHHHhhcChHHhhhhhhHHHhhhhchhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCC-----CCCCCCCCC
Q psy10339 94 LESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTELDRLRELAKRQYELSEGKAV-----PDAPGHVDH 168 (476)
Q Consensus 94 Le~dp~frekl~~a~~~di~~gk~~~~l~~v~~~vr~~ldelkr~e~~rlr~l~~~~~~~~~~~~~-----~~~~~h~d~ 168 (476)
||||||||+||++|+++||+||+||++||+||||||+|||+|||+||+|||||+++++++.++.++ +|+|.|||+
T Consensus 65 LEtD~hFrEkLq~a~~EdIKsG~ls~elD~vshhVrtKLdelKrqEv~RLRmlikak~da~qd~~~dh~~llkqfdHLd~ 144 (442)
T KOG3866|consen 65 LETDPHFREKLQNAKEEDIKSGNLSDELDDVSHHVRTKLDELKRQEVERLRMLIKAKIDADQDAHMDHIKLLKQFDHLDV 144 (442)
T ss_pred HhcChHHHHHHHhccHHhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHhhhhcccCc
Confidence 999999999999999999999999999999999999999999999999999999999999999884 899999999
Q ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q psy10339 169 NNPHSFEINDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVH 248 (476)
Q Consensus 169 ~n~~~f~~~dl~~li~~~~~dl~~~d~~r~~~fk~yem~k~~e~~~~~~~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~ 248 (476)
+|+++|+.+||++||++||+||+.||..||++||+|||+|+||||.||+.|++++|++.+.++.+..++|+ +|||++
T Consensus 145 qn~~kFe~~DL~~LIq~at~Dl~~yD~~rheeFK~YEM~KehErr~yL~~l~eE~Rkeaesk~EE~~krH~---~HpKvn 221 (442)
T KOG3866|consen 145 QNLEKFEKEDLRKLIQKATADLNVYDEQRHEEFKQYEMKKEHERRHYLAQLTEEERKEAESKHEESLKRHN---DHPKVN 221 (442)
T ss_pred cchhhhhHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhc---cCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988 999999
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHH
Q psy10339 249 HPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHV 328 (476)
Q Consensus 249 hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~ 328 (476)
||||.+||++||++++|++++.|+|++||.+||.|+||+|+..|+.+++.+++.++|.+.++++++.
T Consensus 222 hPGSkdQLkEVWEE~DgLdpn~fdPKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~------------- 288 (442)
T KOG3866|consen 222 HPGSKDQLKEVWEESDGLDPNQFDPKTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMK------------- 288 (442)
T ss_pred CCCcHHHHHHHHHHhcCCCcccCCcchheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999887766543
Q ss_pred HHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhc
Q psy10339 329 FKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408 (476)
Q Consensus 329 Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~ 408 (476)
++.+++.+|++++|+.+|+|.|..||++||++...+
T Consensus 289 --------------------------------------------EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 289 --------------------------------------------EMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred --------------------------------------------HHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhh
Confidence 567889999999999999999999999999999999
Q ss_pred ccCCCC-CCCcccCCCCCCCHHHHHHHHHHHH
Q psy10339 409 QEFNQD-PGWKPIDQEQVYSQAEVEAYERQRQ 439 (476)
Q Consensus 409 ~~~~~~-~~w~~~d~~g~is~~EL~~~~~~l~ 439 (476)
++|..+ ++|.++++..+||.+||++|++.++
T Consensus 325 kef~~p~e~WEtl~q~~~yTeEEL~~fE~e~A 356 (442)
T KOG3866|consen 325 KEFNPPKEEWETLGQKKVYTEEELQQFEREYA 356 (442)
T ss_pred cccCCcchhhhhhcccccccHHHHHHHHHHHH
Confidence 999776 7999999999999999999997663
No 2
>KOG0027|consensus
Probab=99.74 E-value=1.8e-17 Score=150.57 Aligned_cols=149 Identities=22% Similarity=0.269 Sum_probs=122.7
Q ss_pred CCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 219 MTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 219 l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
++.++..++.+.|..+++++.|.+ +..+|..+++.. |..++..++..++..+|.||||.|++.||..+|.
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i---------~~~el~~~lr~l-g~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~ 71 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKI---------SVEELGAVLRSL-GQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLME 71 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcc---------cHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 678899999999999999999988 899999999986 9999999999999999999999999999999886
Q ss_pred HHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHH
Q psy10339 299 KELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEM 378 (476)
Q Consensus 299 keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~ 378 (476)
+... ...... ...+..+.+|+.||+| |+|+||.+||+.++...+.+. +.+++
T Consensus 72 ~~~~----~~~~~~-------~~~~el~eaF~~fD~d-----~~G~Is~~el~~~l~~lg~~~------------~~~e~ 123 (151)
T KOG0027|consen 72 KLGE----EKTDEE-------ASSEELKEAFRVFDKD-----GDGFISASELKKVLTSLGEKL------------TDEEC 123 (151)
T ss_pred hhhc----cccccc-------ccHHHHHHHHHHHccC-----CCCcCcHHHHHHHHHHhCCcC------------CHHHH
Confidence 4321 111110 0011234799999999 999999999999999866543 22343
Q ss_pred HHHHHHHHHhccCCCCCcccHHHHHHHHhcc
Q psy10339 379 ERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409 (476)
Q Consensus 379 ~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~ 409 (476)
+.||+++|.|+||.|+|+||+++|...
T Consensus 124 ----~~mi~~~d~d~dg~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 124 ----KEMIREVDVDGDGKVNFEEFVKMMSGK 150 (151)
T ss_pred ----HHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence 468999999999999999999999753
No 3
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.69 E-value=3e-16 Score=145.98 Aligned_cols=147 Identities=20% Similarity=0.273 Sum_probs=124.5
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHH
Q psy10339 216 LSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKM 295 (476)
Q Consensus 216 ~~~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~a 295 (476)
...|+++|.+++.+.|.-++++..|.| +..+|..+++. .|..++.-.+..+|..+|. |.|.|++.+|..
T Consensus 11 ~~~~t~~qi~~lkeaF~l~D~d~~G~I---------~~~el~~ilr~-lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~ 79 (160)
T COG5126 11 FTQLTEEQIQELKEAFQLFDRDSDGLI---------DRNELGKILRS-LGFNPSEAEINKLFEEIDA-GNETVDFPEFLT 79 (160)
T ss_pred cccCCHHHHHHHHHHHHHhCcCCCCCC---------cHHHHHHHHHH-cCCCCcHHHHHHHHHhccC-CCCccCHHHHHH
Confidence 346999999999999999999999999 88999999995 5999988889999999999 999999999999
Q ss_pred HHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhH
Q psy10339 296 LFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERA 375 (476)
Q Consensus 296 lm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~ 375 (476)
+|..- ....++.+++. ++|+.||+| ++|+|+..||+.+++..+.++ +.
T Consensus 80 ~ms~~----~~~~~~~Eel~-----------~aF~~fD~d-----~dG~Is~~eL~~vl~~lge~~------------~d 127 (160)
T COG5126 80 VMSVK----LKRGDKEEELR-----------EAFKLFDKD-----HDGYISIGELRRVLKSLGERL------------SD 127 (160)
T ss_pred HHHHH----hccCCcHHHHH-----------HHHHHhCCC-----CCceecHHHHHHHHHhhcccC------------CH
Confidence 88542 22344444444 899999999 999999999999998755432 23
Q ss_pred HHHHHHHHHHHHhccCCCCCcccHHHHHHHHhcc
Q psy10339 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409 (476)
Q Consensus 376 eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~ 409 (476)
+++ +.||+++|.|+||.|+|++|++++...
T Consensus 128 eev----~~ll~~~d~d~dG~i~~~eF~~~~~~~ 157 (160)
T COG5126 128 EEV----EKLLKEYDEDGDGEIDYEEFKKLIKDS 157 (160)
T ss_pred HHH----HHHHHhcCCCCCceEeHHHHHHHHhcc
Confidence 454 468999999999999999999988764
No 4
>PTZ00183 centrin; Provisional
Probab=99.53 E-value=1.6e-13 Score=122.18 Aligned_cols=149 Identities=21% Similarity=0.185 Sum_probs=117.8
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHH
Q psy10339 216 LSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKM 295 (476)
Q Consensus 216 ~~~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~a 295 (476)
...+++.+.+++.+.|..++.+++|.+ +..+|..+++.. |+......+..+|..+|.|++|.|++.||..
T Consensus 8 ~~~~~~~~~~~~~~~F~~~D~~~~G~i---------~~~e~~~~l~~~-g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~ 77 (158)
T PTZ00183 8 RPGLTEDQKKEIREAFDLFDTDGSGTI---------DPKELKVAMRSL-GFEPKKEEIKQMIADVDKDGSGKIDFEEFLD 77 (158)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCCcc---------cHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 345899999999999999999999888 889999999876 7665556679999999999999999999998
Q ss_pred HHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhH
Q psy10339 296 LFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERA 375 (476)
Q Consensus 296 lm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~ 375 (476)
++... ....... ..++.+|+.+|.| ++|+|+..||..++...+. ..+ .
T Consensus 78 ~~~~~----~~~~~~~-----------~~l~~~F~~~D~~-----~~G~i~~~e~~~~l~~~~~-----~l~-------~ 125 (158)
T PTZ00183 78 IMTKK----LGERDPR-----------EEILKAFRLFDDD-----KTGKISLKNLKRVAKELGE-----TIT-------D 125 (158)
T ss_pred HHHHH----hcCCCcH-----------HHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHhCC-----CCC-------H
Confidence 76421 1111111 1245799999999 9999999999999875321 111 1
Q ss_pred HHHHHHHHHHHHhccCCCCCcccHHHHHHHHhccc
Q psy10339 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410 (476)
Q Consensus 376 eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~~ 410 (476)
.++ ..+|..+|.|+||.|+|+||+.++...+
T Consensus 126 ~~~----~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 156 (158)
T PTZ00183 126 EEL----QEMIDEADRNGDGEISEEEFYRIMKKTN 156 (158)
T ss_pred HHH----HHHHHHhCCCCCCcCcHHHHHHHHhccc
Confidence 232 4689999999999999999999987753
No 5
>PTZ00184 calmodulin; Provisional
Probab=99.51 E-value=2.9e-13 Score=118.61 Aligned_cols=145 Identities=25% Similarity=0.312 Sum_probs=113.5
Q ss_pred cCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHH
Q psy10339 218 LMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLF 297 (476)
Q Consensus 218 ~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm 297 (476)
.+++++.+++.+.|..++.++.|.+ +..+|..++... |.++..-.+..+|..+|.|++|.|+++||..++
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~~~G~i---------~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l 73 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKDGDGTI---------TTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGTIDFPEFLTLM 73 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCCCCCcC---------CHHHHHHHHHHh-CCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHH
Confidence 4789999999999999999999888 889999887764 666665567999999999999999999999877
Q ss_pred HHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHH
Q psy10339 298 LKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377 (476)
Q Consensus 298 ~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE 377 (476)
... +..... ......+|+.||.| |+|+|+.+++..++...+. ..+ .++
T Consensus 74 ~~~----~~~~~~-----------~~~~~~~F~~~D~~-----~~g~i~~~e~~~~l~~~~~-----~~~-------~~~ 121 (149)
T PTZ00184 74 ARK----MKDTDS-----------EEEIKEAFKVFDRD-----GNGFISAAELRHVMTNLGE-----KLT-------DEE 121 (149)
T ss_pred HHh----ccCCcH-----------HHHHHHHHHhhCCC-----CCCeEeHHHHHHHHHHHCC-----CCC-------HHH
Confidence 421 111111 12345799999999 9999999999998865321 111 122
Q ss_pred HHHHHHHHHHhccCCCCCcccHHHHHHHHhc
Q psy10339 378 MERMREHVFKEADVNRDRLISWEEFLEMTRR 408 (476)
Q Consensus 378 ~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~ 408 (476)
+..++..+|.|+||.|||+||+.++..
T Consensus 122 ----~~~~~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 122 ----VDEMIREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred ----HHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence 246899999999999999999988753
No 6
>KOG4223|consensus
Probab=99.49 E-value=1.3e-13 Score=139.54 Aligned_cols=186 Identities=19% Similarity=0.196 Sum_probs=126.3
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhc
Q psy10339 227 FLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYK 306 (476)
Q Consensus 227 ~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~ 306 (476)
+..-+..++-+.+|-+ +..+|+..|..+.- .--..+....|..+|.|.||+|+|+|+...+..-. ...
T Consensus 79 l~~l~~~iD~~~Dgfv---------~~~El~~wi~~s~k-~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~--~~~ 146 (325)
T KOG4223|consen 79 LGKLVPKIDSDSDGFV---------TESELKAWIMQSQK-KYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRV--DLP 146 (325)
T ss_pred HHHHHhhhcCCCCCce---------eHHHHHHHHHHHHH-HHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcc--cCc
Confidence 3344455555555444 67888886554311 01123357789999999999999999986552100 000
Q ss_pred cCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHH----H
Q psy10339 307 EGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERM----R 382 (476)
Q Consensus 307 ~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M----~ 382 (476)
....+.+.......+...++.-|+..|.| |||.+|.+||.+++..+ +...| +
T Consensus 147 ~~~~d~e~~~~~~km~~rDe~rFk~AD~d-----~dg~lt~EEF~aFLHPE-------------------e~p~M~~iVi 202 (325)
T KOG4223|consen 147 DEFPDEEDNEEYKKMIARDEERFKAADQD-----GDGSLTLEEFTAFLHPE-------------------EHPHMKDIVI 202 (325)
T ss_pred cccccchhcHHHHHHHHHHHHHHhhcccC-----CCCcccHHHHHhccChh-------------------hcchHHHHHH
Confidence 00011111112234455667889999999 99999999999987652 23333 3
Q ss_pred HHHHHhccCCCCCcccHHHHHHHHhcccC-CCCCCCccc-----------CCCCCCCHHHHHHHH-----HHHHHHHHHH
Q psy10339 383 EHVFKEADVNRDRLISWEEFLEMTRRQEF-NQDPGWKPI-----------DQEQVYSQAEVEAYE-----RQRQAEVDRL 445 (476)
Q Consensus 383 e~mi~EvD~DgDG~ISfeEFl~~m~~~~~-~~~~~w~~~-----------d~~g~is~~EL~~~~-----~~l~eE~~~m 445 (476)
.+-|.++|+||||.||++||+.-|-+... ...+.|... |+||+++.+||+.|. .....|+.+|
T Consensus 203 ~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL 282 (325)
T KOG4223|consen 203 AETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHL 282 (325)
T ss_pred HHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHH
Confidence 44578899999999999999998877654 444678733 799999999999998 5667999999
Q ss_pred HHc
Q psy10339 446 VRE 448 (476)
Q Consensus 446 i~~ 448 (476)
|.+
T Consensus 283 ~~e 285 (325)
T KOG4223|consen 283 LHE 285 (325)
T ss_pred hhh
Confidence 976
No 7
>KOG0044|consensus
Probab=99.46 E-value=5e-13 Score=127.95 Aligned_cols=132 Identities=17% Similarity=0.275 Sum_probs=97.4
Q ss_pred CHHHHHHHHHhcCC-CCCCCCCHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHH
Q psy10339 252 SKKQLEEVWQEQDH-MGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFK 330 (476)
Q Consensus 252 s~~qL~ev~~~~~G-l~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk 330 (476)
+..+++.++..... .+++.| +..+|+.||.|+||.|++.||..++.. ...+..+ +..+++|+
T Consensus 45 ~~~~F~~i~~~~fp~gd~~~y-~~~vF~~fD~~~dg~i~F~Efi~als~-----~~rGt~e-----------ekl~w~F~ 107 (193)
T KOG0044|consen 45 TLEEFREIYASFFPDGDASKY-AELVFRTFDKNKDGTIDFLEFICALSL-----TSRGTLE-----------EKLKWAFR 107 (193)
T ss_pred CHHHHHHHHHHHCCCCCHHHH-HHHHHHHhcccCCCCcCHHHHHHHHHH-----HcCCcHH-----------HHhhhhhe
Confidence 45778888888743 455556 789999999999999999998877642 2223222 23447899
Q ss_pred HhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhccc
Q psy10339 331 EADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410 (476)
Q Consensus 331 ~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~~ 410 (476)
.||.| |||+||..|+..++.+....+.....+..+ ++++++ ++.+|+.+|.|+||.||++||+..+.+++
T Consensus 108 lyD~d-----gdG~It~~Eml~iv~~i~~m~~~~~~~~~~--~~~~~~---v~~if~k~D~n~Dg~lT~eef~~~~~~d~ 177 (193)
T KOG0044|consen 108 LYDLD-----GDGYITKEEMLKIVQAIYQMTGSKALPEDE--ETPEER---VDKIFSKMDKNKDGKLTLEEFIEGCKADP 177 (193)
T ss_pred eecCC-----CCceEcHHHHHHHHHHHHHHcccccCCccc--ccHHHH---HHHHHHHcCCCCCCcccHHHHHHHhhhCH
Confidence 99999 999999999999998755433221111111 234444 57899999999999999999999988764
No 8
>KOG0028|consensus
Probab=99.42 E-value=2.2e-12 Score=119.71 Aligned_cols=146 Identities=15% Similarity=0.171 Sum_probs=119.1
Q ss_pred cCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHH
Q psy10339 218 LMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLF 297 (476)
Q Consensus 218 ~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm 297 (476)
.++++|+++.++.|.-++-.+.+.+ ...+|.-.+++. |.++..-++..+...+|++|.|+|++.+|..+|
T Consensus 26 ~l~~~q~q~i~e~f~lfd~~~~g~i---------D~~EL~vAmral-GFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~m 95 (172)
T KOG0028|consen 26 ELTEEQKQEIKEAFELFDPDMAGKI---------DVEELKVAMRAL-GFEPKKEEILKLLADVDKEGSGKITFEDFRRVM 95 (172)
T ss_pred cccHHHHhhHHHHHHhhccCCCCcc---------cHHHHHHHHHHc-CCCcchHHHHHHHHhhhhccCceechHHHHHHH
Confidence 4899999999999999998888777 567887666664 998888888999999999999999999999988
Q ss_pred HHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHH
Q psy10339 298 LKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377 (476)
Q Consensus 298 ~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE 377 (476)
.. .+...++..++. .+|+.||.| ++|.||..+|+.++...+. +.++ ++
T Consensus 96 t~----k~~e~dt~eEi~-----------~afrl~D~D-----~~Gkis~~~lkrvakeLge-----nltD-------~E 143 (172)
T KOG0028|consen 96 TV----KLGERDTKEEIK-----------KAFRLFDDD-----KTGKISQRNLKRVAKELGE-----NLTD-------EE 143 (172)
T ss_pred HH----HHhccCcHHHHH-----------HHHHccccc-----CCCCcCHHHHHHHHHHhCc-----cccH-------HH
Confidence 53 233444444444 799999999 9999999999999876442 2222 34
Q ss_pred HHHHHHHHHHhccCCCCCcccHHHHHHHHhcc
Q psy10339 378 MERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409 (476)
Q Consensus 378 ~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~ 409 (476)
+ ..||.++|.|+||.|+-+||+.+|++.
T Consensus 144 l----~eMIeEAd~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 144 L----MEMIEEADRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred H----HHHHHHhcccccccccHHHHHHHHhcC
Confidence 4 358999999999999999999999764
No 9
>KOG0034|consensus
Probab=99.33 E-value=3.4e-11 Score=114.96 Aligned_cols=149 Identities=21% Similarity=0.319 Sum_probs=115.5
Q ss_pred CCHHHHHHHHHHHHHHHHh-hccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCc-ccHHHHHHH
Q psy10339 219 MTDQEKEEFLKKEAEEIRK-RKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHV-WDEEEVKML 296 (476)
Q Consensus 219 l~eeer~e~~~~~~e~~~~-~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~-Id~eEf~al 296 (476)
++..|...+-..|.++.+. .+|.+ |..|+..+..-. .+ -+ ...+|..||.+++|. |++.+|..+
T Consensus 27 fs~~EI~~L~~rF~kl~~~~~~g~l---------t~eef~~i~~~~--~N--p~-~~rI~~~f~~~~~~~~v~F~~Fv~~ 92 (187)
T KOG0034|consen 27 FSANEIERLYERFKKLDRNNGDGYL---------TKEEFLSIPELA--LN--PL-ADRIIDRFDTDGNGDPVDFEEFVRL 92 (187)
T ss_pred cCHHHHHHHHHHHHHhccccccCcc---------CHHHHHHHHHHh--cC--cH-HHHHHHHHhccCCCCccCHHHHHHH
Confidence 8888999999999999888 88777 889998876432 22 24 488999999999999 999999987
Q ss_pred HHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHH
Q psy10339 297 FLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAE 376 (476)
Q Consensus 297 m~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~e 376 (476)
+. ++.+..... ...+-+|+.||.| ++|+|+.+||..++....+. ..+. ..+
T Consensus 93 ls-----~f~~~~~~~----------~Kl~faF~vYD~~-----~~G~I~reel~~iv~~~~~~----~~~~-----~~e 143 (187)
T KOG0034|consen 93 LS-----VFSPKASKR----------EKLRFAFRVYDLD-----GDGFISREELKQILRMMVGE----NDDM-----SDE 143 (187)
T ss_pred Hh-----hhcCCccHH----------HHHHHHHHHhcCC-----CCCcCcHHHHHHHHHHHHcc----CCcc-----hHH
Confidence 74 233332222 1233689999999 99999999999998775431 1111 134
Q ss_pred HHHHHHHHHHHhccCCCCCcccHHHHHHHHhccc
Q psy10339 377 EMERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410 (476)
Q Consensus 377 E~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~~ 410 (476)
.+..|++.+|.++|.|+||.|||+||...+.+.+
T Consensus 144 ~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P 177 (187)
T KOG0034|consen 144 QLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQP 177 (187)
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCc
Confidence 5667889999999999999999999999998763
No 10
>KOG0027|consensus
Probab=99.30 E-value=9.2e-12 Score=113.25 Aligned_cols=106 Identities=21% Similarity=0.325 Sum_probs=85.6
Q ss_pred HHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHH
Q psy10339 325 REHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLE 404 (476)
Q Consensus 325 re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~ 404 (476)
...+|+.||+| |+|+|+..||..+++..+... +..++ ..+++++|.||||.|+|+||+.
T Consensus 10 l~~~F~~fD~d-----~~G~i~~~el~~~lr~lg~~~------------t~~el----~~~~~~~D~dg~g~I~~~eF~~ 68 (151)
T KOG0027|consen 10 LKEAFQLFDKD-----GDGKISVEELGAVLRSLGQNP------------TEEEL----RDLIKEIDLDGDGTIDFEEFLD 68 (151)
T ss_pred HHHHHHHHCCC-----CCCcccHHHHHHHHHHcCCCC------------CHHHH----HHHHHHhCCCCCCeEcHHHHHH
Confidence 34799999999 999999999999998754321 22343 4689999999999999999999
Q ss_pred HHhcccCCCC----------CCCccc--CCCCCCCHHHHHHHHHHHH-----HHHHHHHHcCCC
Q psy10339 405 MTRRQEFNQD----------PGWKPI--DQEQVYSQAEVEAYERQRQ-----AEVDRLVREGKI 451 (476)
Q Consensus 405 ~m~~~~~~~~----------~~w~~~--d~~g~is~~EL~~~~~~l~-----eE~~~mi~~~~~ 451 (476)
+|.+...... .+|+.+ |++|+||++||+.++..++ +||..||++.-.
T Consensus 69 l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~ 132 (151)
T KOG0027|consen 69 LMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDV 132 (151)
T ss_pred HHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCC
Confidence 9987543211 467766 6889999999999999996 899999976543
No 11
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.05 E-value=5e-10 Score=87.47 Aligned_cols=64 Identities=30% Similarity=0.488 Sum_probs=52.8
Q ss_pred HHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy10339 326 EHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405 (476)
Q Consensus 326 e~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~ 405 (476)
+++|+.||+| ++|+||.+||..++...+... ....+..++..+|+.+|+|+||.|||+||+.+
T Consensus 3 ~~~F~~~D~d-----~~G~i~~~el~~~~~~~~~~~------------~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 3 KEAFKKFDKD-----GDGYISKEELRRALKHLGRDM------------SDEESDEMIDQIFREFDTDGDGRISFDEFLNF 65 (66)
T ss_dssp HHHHHHHSTT-----SSSEEEHHHHHHHHHHTTSHS------------THHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred HHHHHHHcCC-----ccCCCCHHHHHHHHHHhcccc------------cHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence 4799999999 999999999999997743211 12345556788999999999999999999988
Q ss_pred H
Q psy10339 406 T 406 (476)
Q Consensus 406 m 406 (476)
|
T Consensus 66 ~ 66 (66)
T PF13499_consen 66 M 66 (66)
T ss_dssp H
T ss_pred C
Confidence 6
No 12
>KOG3866|consensus
Probab=98.98 E-value=3e-09 Score=107.70 Aligned_cols=156 Identities=26% Similarity=0.389 Sum_probs=121.1
Q ss_pred CCCCCCCCCC-CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCHHHHHHHHHHHHHHHHhhc
Q psy10339 161 DAPGHVDHNN-PHSFEINDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRK 239 (476)
Q Consensus 161 ~~~~h~d~~n-~~~f~~~dl~~li~~~~~dl~~~d~~r~~~fk~yem~k~~e~~~~~~~l~eeer~e~~~~~~e~~~~~~ 239 (476)
.+..|+||.+ +..|+-=|...+=.=-+.||+.+.++...+...|+.+ +|++|++|+||++++|+.|++.+.+.+++..
T Consensus 125 ~qd~~~dh~~llkqfdHLd~qn~~kFe~~DL~~LIq~at~Dl~~yD~~-rheeFK~YEM~KehErr~yL~~l~eE~Rkea 203 (442)
T KOG3866|consen 125 DQDAHMDHIKLLKQFDHLDVQNLEKFEKEDLRKLIQKATADLNVYDEQ-RHEEFKQYEMKKEHERRHYLAQLTEEERKEA 203 (442)
T ss_pred ccccchhHHHHhhhhcccCccchhhhhHhHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 4457777777 5566655555555667899999999999999999997 9999999999999999999999999988876
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCC--ChhhHhHH
Q psy10339 240 SNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGM--PQNDLMER 317 (476)
Q Consensus 240 ~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d--~e~d~~e~ 317 (476)
...+++..++.. -+|+ +|..|+-+ . +..+|...+ ..++|.
T Consensus 204 -------------esk~EE~~krH~------~HpK-------vnhPGSkd--Q--------LkEVWEE~DgLdpn~fd-- 245 (442)
T KOG3866|consen 204 -------------ESKHEESLKRHN------DHPK-------VNHPGSKD--Q--------LKEVWEESDGLDPNQFD-- 245 (442)
T ss_pred -------------HHHHHHHHHhhc------cCcc-------CCCCCcHH--H--------HHHHHHHhcCCCcccCC--
Confidence 677888777751 2233 57777644 2 344454322 223343
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCC
Q psy10339 318 AEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMP 367 (476)
Q Consensus 318 ~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~ 367 (476)
.+.+|.++|.| |||+++..||.++|+.++.++|++...
T Consensus 246 -------PKTFF~LHD~N-----sDGfldeqELEaLFtkELEKvYdpkNe 283 (442)
T KOG3866|consen 246 -------PKTFFALHDLN-----SDGFLDEQELEALFTKELEKVYDPKNE 283 (442)
T ss_pred -------cchheeeeccC-----CcccccHHHHHHHHHHHHHHhcCCCCc
Confidence 45799999999 999999999999999999999977543
No 13
>KOG0030|consensus
Probab=98.95 E-value=1.3e-08 Score=93.04 Aligned_cols=146 Identities=18% Similarity=0.188 Sum_probs=113.4
Q ss_pred cCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCC--CCCcccHHHHHH
Q psy10339 218 LMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLD--GNHVWDEEEVKM 295 (476)
Q Consensus 218 ~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~D--gDG~Id~eEf~a 295 (476)
.+++++..++.+.|.-++++++++| +..|+.+|++.. |.+|+..++......++.+ +--.|+|++|.-
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~gD~ki---------~~~q~gdvlRal-G~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLp 73 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRTGDGKI---------SGSQVGDVLRAL-GQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLP 73 (152)
T ss_pred ccCcchHHHHHHHHHHHhccCcccc---------cHHHHHHHHHHh-cCCCcHHHHHHHHcCcccchhhhhhhhHHHHHH
Confidence 4577888999999999999999999 889999999986 9999999999999999998 667899999988
Q ss_pred HHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhH
Q psy10339 296 LFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERA 375 (476)
Q Consensus 296 lm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~ 375 (476)
+++. +.+- .....-+++. +-.+.||++ |+|.|...||+++++..|.++. .
T Consensus 74 m~q~-vakn-k~q~t~edfv-----------egLrvFDke-----g~G~i~~aeLRhvLttlGekl~------------e 123 (152)
T KOG0030|consen 74 MYQQ-VAKN-KDQGTYEDFV-----------EGLRVFDKE-----GNGTIMGAELRHVLTTLGEKLT------------E 123 (152)
T ss_pred HHHH-HHhc-cccCcHHHHH-----------HHHHhhccc-----CCcceeHHHHHHHHHHHHhhcc------------H
Confidence 7753 1111 1111223443 467899999 9999999999999999877653 2
Q ss_pred HHHHHHHHHHHHhccCCCCCcccHHHHHHHHhc
Q psy10339 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408 (476)
Q Consensus 376 eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~ 408 (476)
+|+. .+++- -.|++|.|+|+.|++.+.+
T Consensus 124 eEVe----~Llag-~eD~nG~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 124 EEVE----ELLAG-QEDSNGCINYEAFVKHIMS 151 (152)
T ss_pred HHHH----HHHcc-ccccCCcCcHHHHHHHHhc
Confidence 3442 34433 3477899999999987653
No 14
>PTZ00183 centrin; Provisional
Probab=98.93 E-value=1.9e-08 Score=89.54 Aligned_cols=127 Identities=18% Similarity=0.175 Sum_probs=89.3
Q ss_pred HhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHH
Q psy10339 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKML 353 (476)
Q Consensus 274 k~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~ 353 (476)
..+|..+|.|++|.|+..||..++.. ++...... ....+|..+|.| ++|.|+..|+..+
T Consensus 20 ~~~F~~~D~~~~G~i~~~e~~~~l~~-----~g~~~~~~-----------~~~~l~~~~d~~-----~~g~i~~~eF~~~ 78 (158)
T PTZ00183 20 REAFDLFDTDGSGTIDPKELKVAMRS-----LGFEPKKE-----------EIKQMIADVDKD-----GSGKIDFEEFLDI 78 (158)
T ss_pred HHHHHHhCCCCCCcccHHHHHHHHHH-----hCCCCCHH-----------HHHHHHHHhCCC-----CCCcEeHHHHHHH
Confidence 67799999999999999999988742 12211211 234799999999 9999999999988
Q ss_pred HHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhcccCCCC-----CCCcc--cCCCCCC
Q psy10339 354 FLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQD-----PGWKP--IDQEQVY 426 (476)
Q Consensus 354 ~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~~~~~~-----~~w~~--~d~~g~i 426 (476)
+..... ... ..+. +..+|+.+|.|++|.|+++||..++..-..... .-+.. .+++|.|
T Consensus 79 ~~~~~~----~~~-------~~~~----l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i 143 (158)
T PTZ00183 79 MTKKLG----ERD-------PREE----ILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEI 143 (158)
T ss_pred HHHHhc----CCC-------cHHH----HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcC
Confidence 754211 000 1112 356899999999999999999998875321111 11222 2688999
Q ss_pred CHHHHHHHHH
Q psy10339 427 SQAEVEAYER 436 (476)
Q Consensus 427 s~~EL~~~~~ 436 (476)
|.+|+..+..
T Consensus 144 ~~~ef~~~~~ 153 (158)
T PTZ00183 144 SEEEFYRIMK 153 (158)
T ss_pred cHHHHHHHHh
Confidence 9999987764
No 15
>KOG0031|consensus
Probab=98.91 E-value=2.9e-08 Score=92.06 Aligned_cols=65 Identities=20% Similarity=0.364 Sum_probs=54.8
Q ss_pred HHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHH
Q psy10339 324 MREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFL 403 (476)
Q Consensus 324 ~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl 403 (476)
..-.+|+.||.+ |+|.|..+.|+.+++..+.++ +.+|+ +.|++.+=.|..|.|+|.+|+
T Consensus 102 ~I~~AF~~FD~~-----~~G~I~~d~lre~Ltt~gDr~------------~~eEV----~~m~r~~p~d~~G~~dy~~~~ 160 (171)
T KOG0031|consen 102 VILNAFKTFDDE-----GSGKIDEDYLRELLTTMGDRF------------TDEEV----DEMYREAPIDKKGNFDYKAFT 160 (171)
T ss_pred HHHHHHHhcCcc-----CCCccCHHHHHHHHHHhcccC------------CHHHH----HHHHHhCCcccCCceeHHHHH
Confidence 334799999999 999999999999998866543 34565 468999999999999999999
Q ss_pred HHHhcc
Q psy10339 404 EMTRRQ 409 (476)
Q Consensus 404 ~~m~~~ 409 (476)
.++...
T Consensus 161 ~~ithG 166 (171)
T KOG0031|consen 161 YIITHG 166 (171)
T ss_pred HHHHcc
Confidence 999854
No 16
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.91 E-value=4.4e-09 Score=98.26 Aligned_cols=103 Identities=19% Similarity=0.269 Sum_probs=83.9
Q ss_pred HHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHH
Q psy10339 324 MREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFL 403 (476)
Q Consensus 324 ~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl 403 (476)
.|+.+|..||.| ++|.|+..+|..+++..+.. . +..+ +.+||..+|. |.|.|+|.+|+
T Consensus 21 ~lkeaF~l~D~d-----~~G~I~~~el~~ilr~lg~~-----~-------s~~e----i~~l~~~~d~-~~~~idf~~Fl 78 (160)
T COG5126 21 ELKEAFQLFDRD-----SDGLIDRNELGKILRSLGFN-----P-------SEAE----INKLFEEIDA-GNETVDFPEFL 78 (160)
T ss_pred HHHHHHHHhCcC-----CCCCCcHHHHHHHHHHcCCC-----C-------cHHH----HHHHHHhccC-CCCccCHHHHH
Confidence 466899999999 99999999999999863321 1 1223 3578999999 99999999999
Q ss_pred HHHhcccCCCC------CCCccc--CCCCCCCHHHHHHHHHHHH-----HHHHHHHHc
Q psy10339 404 EMTRRQEFNQD------PGWKPI--DQEQVYSQAEVEAYERQRQ-----AEVDRLVRE 448 (476)
Q Consensus 404 ~~m~~~~~~~~------~~w~~~--d~~g~is~~EL~~~~~~l~-----eE~~~mi~~ 448 (476)
.+|.......+ .+|+.+ |++|+||..||..|++.++ +|++.||..
T Consensus 79 ~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~ 136 (160)
T COG5126 79 TVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKE 136 (160)
T ss_pred HHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHh
Confidence 99988654322 477766 6999999999999999885 999999875
No 17
>KOG0028|consensus
Probab=98.87 E-value=5.9e-09 Score=97.11 Aligned_cols=105 Identities=17% Similarity=0.202 Sum_probs=85.5
Q ss_pred HHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHH
Q psy10339 324 MREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFL 403 (476)
Q Consensus 324 ~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl 403 (476)
-.+..|..||.+ ++|+|+..||..++++.|... ..+++ ..|+.++|.+|.|.|+|++|+
T Consensus 34 ~i~e~f~lfd~~-----~~g~iD~~EL~vAmralGFE~------------~k~ei----~kll~d~dk~~~g~i~fe~f~ 92 (172)
T KOG0028|consen 34 EIKEAFELFDPD-----MAGKIDVEELKVAMRALGFEP------------KKEEI----LKLLADVDKEGSGKITFEDFR 92 (172)
T ss_pred hHHHHHHhhccC-----CCCcccHHHHHHHHHHcCCCc------------chHHH----HHHHHhhhhccCceechHHHH
Confidence 345799999999 999999999999888755421 11243 468999999999999999999
Q ss_pred HHHhcccCCCC------CCCccc--CCCCCCCHHHHHHHHHHHHH-----HHHHHHHcC
Q psy10339 404 EMTRRQEFNQD------PGWKPI--DQEQVYSQAEVEAYERQRQA-----EVDRLVREG 449 (476)
Q Consensus 404 ~~m~~~~~~~~------~~w~~~--d~~g~is~~EL~~~~~~l~e-----E~~~mi~~~ 449 (476)
..|+......+ .+|+.. |.+|.||+.+|+.+..+|++ |.+.||.+-
T Consensus 93 ~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEA 151 (172)
T KOG0028|consen 93 RVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEA 151 (172)
T ss_pred HHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHh
Confidence 99887654443 366644 79999999999999999986 999999874
No 18
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.86 E-value=8.3e-09 Score=87.59 Aligned_cols=65 Identities=29% Similarity=0.435 Sum_probs=52.4
Q ss_pred HHHHHHhcc-CCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHH
Q psy10339 326 EHVFKEADV-NRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLE 404 (476)
Q Consensus 326 e~~Fk~fD~-D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~ 404 (476)
..+|+.||. + |+|+|+.+||+.+++++++... +. .++ ++.||+.+|.|+||.|+|+||+.
T Consensus 11 ~~~F~~fd~~~-----~~g~i~~~ELk~ll~~elg~~l----s~------~~~----v~~mi~~~D~d~DG~I~F~EF~~ 71 (89)
T cd05022 11 VSNFHKASVKG-----GKESLTASEFQELLTQQLPHLL----KD------VEG----LEEKMKNLDVNQDSKLSFEEFWE 71 (89)
T ss_pred HHHHHHHhCCC-----CCCeECHHHHHHHHHHHhhhhc----cC------HHH----HHHHHHHhCCCCCCCCcHHHHHH
Confidence 469999999 8 9999999999999998554221 11 023 35689999999999999999999
Q ss_pred HHhcc
Q psy10339 405 MTRRQ 409 (476)
Q Consensus 405 ~m~~~ 409 (476)
+|.+.
T Consensus 72 l~~~l 76 (89)
T cd05022 72 LIGEL 76 (89)
T ss_pred HHHHH
Confidence 98764
No 19
>PTZ00184 calmodulin; Provisional
Probab=98.85 E-value=3e-08 Score=86.90 Aligned_cols=126 Identities=17% Similarity=0.207 Sum_probs=87.9
Q ss_pred HhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHH
Q psy10339 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKML 353 (476)
Q Consensus 274 k~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~ 353 (476)
...|..+|.|++|.|++.||..++.. .+...... ....+|+.+|.| ++|.|+.+++..+
T Consensus 14 ~~~F~~~D~~~~G~i~~~e~~~~l~~-----~~~~~~~~-----------~~~~~~~~~d~~-----~~g~i~~~ef~~~ 72 (149)
T PTZ00184 14 KEAFSLFDKDGDGTITTKELGTVMRS-----LGQNPTEA-----------ELQDMINEVDAD-----GNGTIDFPEFLTL 72 (149)
T ss_pred HHHHHHHcCCCCCcCCHHHHHHHHHH-----hCCCCCHH-----------HHHHHHHhcCcC-----CCCcCcHHHHHHH
Confidence 67899999999999999999987632 12211111 235799999999 9999999999988
Q ss_pred HHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhcccCCCC-C----CCccc--CCCCCC
Q psy10339 354 FLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQD-P----GWKPI--DQEQVY 426 (476)
Q Consensus 354 ~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~~~~~~-~----~w~~~--d~~g~i 426 (476)
+...... . ... + .+..+|+.+|.|++|.|+.+||..++..-...-. . -+..+ +++|.|
T Consensus 73 l~~~~~~-------~----~~~-~---~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i 137 (149)
T PTZ00184 73 MARKMKD-------T----DSE-E---EIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQI 137 (149)
T ss_pred HHHhccC-------C----cHH-H---HHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcC
Confidence 7642110 0 011 1 1356899999999999999999988866322111 1 11122 678999
Q ss_pred CHHHHHHHH
Q psy10339 427 SQAEVEAYE 435 (476)
Q Consensus 427 s~~EL~~~~ 435 (476)
|-+|...+.
T Consensus 138 ~~~ef~~~~ 146 (149)
T PTZ00184 138 NYEEFVKMM 146 (149)
T ss_pred cHHHHHHHH
Confidence 988887665
No 20
>KOG0037|consensus
Probab=98.70 E-value=1e-07 Score=92.74 Aligned_cols=146 Identities=14% Similarity=0.167 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCH---HhhhhhccCCCCCcccHHHHHHHHHHHHH
Q psy10339 226 EFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNP---KAFFAMHDLDGNHVWDEEEVKMLFLKELD 302 (476)
Q Consensus 226 e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~p---k~~F~l~D~DgDG~Id~eEf~alm~keL~ 302 (476)
++-.-|.+.++++.+.| +.++|...+... .-+.|++ +-+..+||.+++|+|.+.||.++...
T Consensus 58 ~~~~~f~~vD~d~sg~i---------~~~eLq~aLsn~---~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~--- 122 (221)
T KOG0037|consen 58 QLAGWFQSVDRDRSGRI---------LAKELQQALSNG---TWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKY--- 122 (221)
T ss_pred HHHHHHHhhCccccccc---------cHHHHHHHhhcC---CCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH---
Confidence 45566777888888888 778888765521 1223444 66789999999999999999876631
Q ss_pred HHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHH
Q psy10339 303 KMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMR 382 (476)
Q Consensus 303 k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~ 382 (476)
..-|+.+|+.||+| ++|.|+..||+.+|...+..+. + ++ .
T Consensus 123 -------------------i~~Wr~vF~~~D~D-----~SG~I~~sEL~~Al~~~Gy~Ls------------p-q~---~ 162 (221)
T KOG0037|consen 123 -------------------INQWRNVFRTYDRD-----RSGTIDSSELRQALTQLGYRLS------------P-QF---Y 162 (221)
T ss_pred -------------------HHHHHHHHHhcccC-----CCCcccHHHHHHHHHHcCcCCC------------H-HH---H
Confidence 12477999999999 9999999999999988665431 1 22 3
Q ss_pred HHHHHhccCCCCCcccHHHHHHHHhcccCCCCCCCccc--CCCCCCC
Q psy10339 383 EHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWKPI--DQEQVYS 427 (476)
Q Consensus 383 e~mi~EvD~DgDG~ISfeEFl~~m~~~~~~~~~~w~~~--d~~g~is 427 (476)
+.+++.+|.-++|.|.|++|+..+-.-.- ..++|+.. +++|.|+
T Consensus 163 ~~lv~kyd~~~~g~i~FD~FI~ccv~L~~-lt~~Fr~~D~~q~G~i~ 208 (221)
T KOG0037|consen 163 NLLVRKYDRFGGGRIDFDDFIQCCVVLQR-LTEAFRRRDTAQQGSIT 208 (221)
T ss_pred HHHHHHhccccCCceeHHHHHHHHHHHHH-HHHHHHHhccccceeEE
Confidence 55899999888999999999986543210 01344444 4556554
No 21
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.70 E-value=3.7e-08 Score=83.57 Aligned_cols=67 Identities=18% Similarity=0.361 Sum_probs=50.7
Q ss_pred HHHHHHhc-cCCCCCCCCc-cccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHH
Q psy10339 326 EHVFKEAD-VNRDHLDGNH-VWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFL 403 (476)
Q Consensus 326 e~~Fk~fD-~D~dg~~GDG-~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl 403 (476)
..+|..|| +| |+| +||.+||+.++...++....... ...+ ++.||+++|.|+||.|+|+||+
T Consensus 13 ~~~F~~~dd~d-----gdg~~Is~~EL~~ll~~~~~~~~~~~~-------~~~~----v~~i~~elD~n~dG~Idf~EF~ 76 (93)
T cd05026 13 IRIFHNYSGKE-----GDRYKLSKGELKELLQRELTDFLSSQK-------DPML----VDKIMNDLDSNKDNEVDFNEFV 76 (93)
T ss_pred HHHHHHHHccC-----CCCCEECHHHHHHHHHHHhHHhccccc-------CHHH----HHHHHHHhCCCCCCCCCHHHHH
Confidence 36899999 88 998 59999999999775432111110 1123 4679999999999999999999
Q ss_pred HHHhc
Q psy10339 404 EMTRR 408 (476)
Q Consensus 404 ~~m~~ 408 (476)
.+|..
T Consensus 77 ~l~~~ 81 (93)
T cd05026 77 VLVAA 81 (93)
T ss_pred HHHHH
Confidence 99875
No 22
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.66 E-value=1.1e-07 Score=80.38 Aligned_cols=68 Identities=22% Similarity=0.334 Sum_probs=52.4
Q ss_pred HHHHHHHhc-cCCCCCCCCc-cccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHH
Q psy10339 325 REHVFKEAD-VNRDHLDGNH-VWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEF 402 (476)
Q Consensus 325 re~~Fk~fD-~D~dg~~GDG-~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEF 402 (476)
...+|+.|| .| |+| +|+..||+.+|+.++..+.+... +.+++ +.||+.+|.|+||.|+|+||
T Consensus 10 l~~aF~~fD~~d-----gdG~~I~~~eL~~ll~~~~~~~lg~~~-------~~~~v----~~~i~~~D~n~dG~v~f~eF 73 (88)
T cd05027 10 LIDVFHQYSGRE-----GDKHKLKKSELKELINNELSHFLEEIK-------EQEVV----DKVMETLDSDGDGECDFQEF 73 (88)
T ss_pred HHHHHHHhcccC-----CCcCEECHHHHHHHHHHHhHHHhcCCC-------CHHHH----HHHHHHhCCCCCCcCcHHHH
Confidence 347999998 79 999 59999999999875443322211 12233 56899999999999999999
Q ss_pred HHHHhc
Q psy10339 403 LEMTRR 408 (476)
Q Consensus 403 l~~m~~ 408 (476)
+.++..
T Consensus 74 ~~li~~ 79 (88)
T cd05027 74 MAFVAM 79 (88)
T ss_pred HHHHHH
Confidence 998765
No 23
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.58 E-value=2.1e-07 Score=78.57 Aligned_cols=69 Identities=25% Similarity=0.382 Sum_probs=51.7
Q ss_pred HHHHHHHhcc-CCCCCCC-CccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHH
Q psy10339 325 REHVFKEADV-NRDHLDG-NHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEF 402 (476)
Q Consensus 325 re~~Fk~fD~-D~dg~~G-DG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEF 402 (476)
+..+|..||. | | +|+||..||+.++...++...+... +.++ ++.||+.+|.|+||.|+|+||
T Consensus 10 l~~~F~~~D~~d-----g~dG~Is~~El~~~l~~~~g~~lg~~~-------s~~e----i~~~~~~~D~~~dg~I~f~eF 73 (94)
T cd05031 10 LILTFHRYAGKD-----GDKNTLSRKELKKLMEKELSEFLKNQK-------DPMA----VDKIMKDLDQNRDGKVNFEEF 73 (94)
T ss_pred HHHHHHHHhccC-----CCCCeECHHHHHHHHHHHhHHHhhccc-------cHHH----HHHHHHHhCCCCCCcCcHHHH
Confidence 3469999997 9 8 6999999999999764332111111 1123 356899999999999999999
Q ss_pred HHHHhcc
Q psy10339 403 LEMTRRQ 409 (476)
Q Consensus 403 l~~m~~~ 409 (476)
+.+|...
T Consensus 74 ~~l~~~~ 80 (94)
T cd05031 74 VSLVAGL 80 (94)
T ss_pred HHHHHHH
Confidence 9988754
No 24
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.56 E-value=2.7e-07 Score=78.18 Aligned_cols=68 Identities=22% Similarity=0.342 Sum_probs=51.4
Q ss_pred HHHHHHH-hccCCCCCCCCc-cccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHH
Q psy10339 325 REHVFKE-ADVNRDHLDGNH-VWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEF 402 (476)
Q Consensus 325 re~~Fk~-fD~D~dg~~GDG-~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEF 402 (476)
+..+|+. +|+| |+| +||.+||+.++..++........ ...+ ++.||+++|.|+||.|+|+||
T Consensus 11 l~~~F~~y~~~d-----g~~~~Ls~~Elk~ll~~e~~~~~~~~~-------~~~~----~~~ll~~~D~d~DG~I~f~EF 74 (89)
T cd05023 11 LIAVFQKYAGKD-----GDSYQLSKTEFLSFMNTELASFTKNQK-------DPGV----LDRMMKKLDLNSDGQLDFQEF 74 (89)
T ss_pred HHHHHHHHhccC-----CCcCeECHHHHHHHHHHhhhHhhcCCC-------CHHH----HHHHHHHcCCCCCCcCcHHHH
Confidence 4468888 8899 876 99999999999886533221111 1122 467899999999999999999
Q ss_pred HHHHhc
Q psy10339 403 LEMTRR 408 (476)
Q Consensus 403 l~~m~~ 408 (476)
+.+|..
T Consensus 75 ~~l~~~ 80 (89)
T cd05023 75 LNLIGG 80 (89)
T ss_pred HHHHHH
Confidence 998875
No 25
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.55 E-value=3e-07 Score=77.27 Aligned_cols=69 Identities=23% Similarity=0.375 Sum_probs=52.0
Q ss_pred HHHHHHHhc-cCCCCCCCCcc-ccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHH
Q psy10339 325 REHVFKEAD-VNRDHLDGNHV-WDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEF 402 (476)
Q Consensus 325 re~~Fk~fD-~D~dg~~GDG~-IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEF 402 (476)
..++|+.|| .| |+|+ |+..||+.++...++....... +.++ ++.||+.+|.|+||.|+|+||
T Consensus 11 l~~~F~~fDd~d-----g~G~~Is~~El~~~l~~~lg~~~~~~~-------s~~~----v~~i~~~~D~d~~G~I~f~eF 74 (92)
T cd05025 11 LINVFHAHSGKE-----GDKYKLSKKELKDLLQTELSDFLDAQK-------DADA----VDKIMKELDENGDGEVDFQEF 74 (92)
T ss_pred HHHHHHHHhccc-----CCCCeECHHHHHHHHHHHHHHHccCCC-------CHHH----HHHHHHHHCCCCCCcCcHHHH
Confidence 457999997 99 9995 9999999999764432111111 1223 356899999999999999999
Q ss_pred HHHHhcc
Q psy10339 403 LEMTRRQ 409 (476)
Q Consensus 403 l~~m~~~ 409 (476)
+.++...
T Consensus 75 ~~l~~~~ 81 (92)
T cd05025 75 VVLVAAL 81 (92)
T ss_pred HHHHHHH
Confidence 9988763
No 26
>KOG0036|consensus
Probab=98.52 E-value=1e-06 Score=92.40 Aligned_cols=181 Identities=17% Similarity=0.156 Sum_probs=128.9
Q ss_pred hcCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHH
Q psy10339 217 SLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKML 296 (476)
Q Consensus 217 ~~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~al 296 (476)
..++++-..++...|++++-+..|.+ +.++|...+....+-.+..--++.+|+..|.|.||.+|++||...
T Consensus 6 ~~~~~er~~r~~~lf~~lD~~~~g~~---------d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y 76 (463)
T KOG0036|consen 6 RETDEERDIRIRCLFKELDSKNDGQV---------DLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRY 76 (463)
T ss_pred cCCcHHHHHHHHHHHHHhccCCCCce---------eHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHH
Confidence 34677888889999999999988777 789999888886544333333688999999999999999999987
Q ss_pred HHH-HHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhH
Q psy10339 297 FLK-ELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERA 375 (476)
Q Consensus 297 m~k-eL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~ 375 (476)
+.. |+ . ...+|...|.| .||.|+.+|+...++..+.++ + .
T Consensus 77 ~~~~E~-----------~-----------l~~~F~~iD~~-----hdG~i~~~Ei~~~l~~~gi~l-----~-------d 117 (463)
T KOG0036|consen 77 LDNKEL-----------E-----------LYRIFQSIDLE-----HDGKIDPNEIWRYLKDLGIQL-----S-------D 117 (463)
T ss_pred HHHhHH-----------H-----------HHHHHhhhccc-----cCCccCHHHHHHHHHHhCCcc-----C-------H
Confidence 642 11 1 12689999999 999999999999987754332 1 1
Q ss_pred HHHHHHHHHHHHhccCCCCCcccHHHHHHHHhcccCCC-C---CCCc-----ccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q psy10339 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQ-D---PGWK-----PIDQEQVYSQAEVEAYERQRQAEVDRLV 446 (476)
Q Consensus 376 eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~~~~~-~---~~w~-----~~d~~g~is~~EL~~~~~~l~eE~~~mi 446 (476)
+++ +.+++-+|.||++.|+++||...+.--+... . +-|+ ++..+..+. ++.-.-+++-+-=..++|
T Consensus 118 e~~----~k~~e~~d~~g~~~I~~~e~rd~~ll~p~s~i~di~~~W~h~~~idigE~~~iP-dg~s~~e~~~g~ww~~li 192 (463)
T KOG0036|consen 118 EKA----AKFFEHMDKDGKATIDLEEWRDHLLLYPESDLEDIYDFWRHVLLIDIGEDAVLP-DGDSKLENDSGRWWGFLI 192 (463)
T ss_pred HHH----HHHHHHhccCCCeeeccHHHHhhhhcCChhHHHHHHHhhhhheEEEccccccCC-cchHHHHhcccchhhhhc
Confidence 233 4589999999999999999999887654211 0 4566 234667776 333333333333345566
Q ss_pred HcCC
Q psy10339 447 REGK 450 (476)
Q Consensus 447 ~~~~ 450 (476)
+.|.
T Consensus 193 AGGi 196 (463)
T KOG0036|consen 193 AGGI 196 (463)
T ss_pred cccc
Confidence 5553
No 27
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.46 E-value=4.2e-07 Score=70.88 Aligned_cols=65 Identities=25% Similarity=0.362 Sum_probs=49.2
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKM 352 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~ 352 (476)
++++|+.+|+|+||+|+.+||..++..- ...... .........+|+.+|+| +||.||.+||..
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~-----~~~~~~-------~~~~~~~~~~~~~~D~d-----~dG~i~~~Ef~~ 64 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHL-----GRDMSD-------EESDEMIDQIFREFDTD-----GDGRISFDEFLN 64 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHT-----TSHSTH-------HHHHHHHHHHHHHHTTT-----SSSSEEHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHh-----cccccH-------HHHHHHHHHHHHHhCCC-----CcCCCcHHHHhc
Confidence 4789999999999999999999887431 111111 11234566789999999 999999999987
Q ss_pred HH
Q psy10339 353 LF 354 (476)
Q Consensus 353 ~~ 354 (476)
++
T Consensus 65 ~~ 66 (66)
T PF13499_consen 65 FM 66 (66)
T ss_dssp HH
T ss_pred cC
Confidence 64
No 28
>PLN02964 phosphatidylserine decarboxylase
Probab=98.44 E-value=6.3e-07 Score=99.48 Aligned_cols=105 Identities=19% Similarity=0.191 Sum_probs=83.5
Q ss_pred hcCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCC-CCCCCCC---HHhhhhhccCCCCCcccHHH
Q psy10339 217 SLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDH-MGNTEFN---PKAFFAMHDLDGNHVWDEEE 292 (476)
Q Consensus 217 ~~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~G-l~~~~f~---pk~~F~l~D~DgDG~Id~eE 292 (476)
..++..|.+++.+.|..++.+++|.+ |..+++.. | ..+++.+ +..+|..+|.|+||.|+++|
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i-------------Lg~ilrsl-G~~~pte~e~~fi~~mf~~~D~DgdG~IdfdE 200 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV-------------VGSIFVSC-SIEDPVETERSFARRILAIVDYDEDGQLSFSE 200 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC-------------HHHHHHHh-CCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHH
Confidence 45666778888899999988877432 88888876 7 4777665 68999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHH
Q psy10339 293 VKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLK 356 (476)
Q Consensus 293 f~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~ 356 (476)
|..+|.. ++....++++ ..+|+.||.| ++|+|+.+||..++..
T Consensus 201 Fl~lL~~-----lg~~~seEEL-----------~eaFk~fDkD-----gdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 201 FSDLIKA-----FGNLVAANKK-----------EELFKAADLN-----GDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHHHH-----hccCCCHHHH-----------HHHHHHhCCC-----CCCcCCHHHHHHHHHh
Confidence 9998842 2333333333 3799999999 9999999999999876
No 29
>KOG0038|consensus
Probab=98.43 E-value=1.1e-06 Score=81.47 Aligned_cols=105 Identities=23% Similarity=0.348 Sum_probs=78.9
Q ss_pred HhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHH
Q psy10339 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKML 353 (476)
Q Consensus 274 k~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~ 353 (476)
+.+-..|-.||.|-+|+++|..+++- +....+ -++. ...+|+.+|-| +|++|..++|...
T Consensus 74 ~ri~e~FSeDG~GnlsfddFlDmfSV-----~sE~AP-rdlK---------~~YAFkIYDfd-----~D~~i~~~DL~~~ 133 (189)
T KOG0038|consen 74 RRICEVFSEDGRGNLSFDDFLDMFSV-----FSEMAP-RDLK---------AKYAFKIYDFD-----GDEFIGHDDLEKT 133 (189)
T ss_pred HHHHHHhccCCCCcccHHHHHHHHHH-----HHhhCh-HHhh---------hhheeEEeecC-----CCCcccHHHHHHH
Confidence 45556677899999999999987741 111111 1111 23689999999 9999999999988
Q ss_pred HHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhcc
Q psy10339 354 FLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409 (476)
Q Consensus 354 ~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~ 409 (476)
+++. +... -+++|+..+++.+|.++|.||||.|||.||-.++.+.
T Consensus 134 l~~l----Tr~e-------Ls~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~ra 178 (189)
T KOG0038|consen 134 LTSL----TRDE-------LSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILRA 178 (189)
T ss_pred HHHH----hhcc-------CCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhC
Confidence 7762 1111 2446788889999999999999999999999998874
No 30
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.41 E-value=7.6e-07 Score=68.83 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=48.2
Q ss_pred HHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHH
Q psy10339 327 HVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMT 406 (476)
Q Consensus 327 ~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m 406 (476)
.+|+.+|+| ++|.||.+|+..++...+ . +.++ +..+++.+|.|+||.|+|+||+.++
T Consensus 3 ~~F~~~D~~-----~~G~i~~~el~~~l~~~g-------~-------~~~~----~~~i~~~~d~~~~g~i~~~ef~~~~ 59 (67)
T cd00052 3 QIFRSLDPD-----GDGLISGDEARPFLGKSG-------L-------PRSV----LAQIWDLADTDKDGKLDKEEFAIAM 59 (67)
T ss_pred HHHHHhCCC-----CCCcCcHHHHHHHHHHcC-------C-------CHHH----HHHHHHHhcCCCCCcCCHHHHHHHH
Confidence 589999999 999999999999987632 0 1122 3568999999999999999999987
Q ss_pred hc
Q psy10339 407 RR 408 (476)
Q Consensus 407 ~~ 408 (476)
..
T Consensus 60 ~~ 61 (67)
T cd00052 60 HL 61 (67)
T ss_pred HH
Confidence 64
No 31
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.39 E-value=5.9e-07 Score=75.88 Aligned_cols=65 Identities=20% Similarity=0.422 Sum_probs=49.1
Q ss_pred HHHHHhcc-CCCCCCC-CccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHH
Q psy10339 327 HVFKEADV-NRDHLDG-NHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLE 404 (476)
Q Consensus 327 ~~Fk~fD~-D~dg~~G-DG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~ 404 (476)
.+|..||. | | +|+|+.+||+.++++... .+... +.+++ +.||+.+|.|+||.|+|+||+.
T Consensus 14 ~~F~~y~~~~-----~~~g~Is~~EL~~~l~~~~~--lg~k~-------t~~ev----~~m~~~~D~d~dG~Idf~EFv~ 75 (88)
T cd05029 14 AIFHKYSGRE-----GDKNTLSKKELKELIQKELT--IGSKL-------QDAEI----AKLMEDLDRNKDQEVNFQEYVT 75 (88)
T ss_pred HHHHHHHccC-----CCCCEECHHHHHHHHHHHHh--cCCCC-------CHHHH----HHHHHHhcCCCCCCCcHHHHHH
Confidence 68999998 6 6 899999999999975210 01111 22344 4689999999999999999999
Q ss_pred HHhcc
Q psy10339 405 MTRRQ 409 (476)
Q Consensus 405 ~m~~~ 409 (476)
+|..-
T Consensus 76 lm~~l 80 (88)
T cd05029 76 FLGAL 80 (88)
T ss_pred HHHHH
Confidence 88653
No 32
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.35 E-value=1.9e-06 Score=71.44 Aligned_cols=69 Identities=25% Similarity=0.396 Sum_probs=51.8
Q ss_pred HHHHHHHhcc--CCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHH
Q psy10339 325 REHVFKEADV--NRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEF 402 (476)
Q Consensus 325 re~~Fk~fD~--D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEF 402 (476)
...+|..||+ | ++|.|+.+||..+++..++....... +..+ ++.||+.+|.|++|.|+|+||
T Consensus 10 l~~~F~~~D~~~~-----~~G~Is~~el~~~l~~~~g~~~~~~~-------~~~e----i~~i~~~~d~~~~g~I~f~eF 73 (88)
T cd00213 10 IIDVFHKYSGKEG-----DKDTLSKKELKELLETELPNFLKNQK-------DPEA----VDKIMKDLDVNKDGKVDFQEF 73 (88)
T ss_pred HHHHHHHHhhccC-----CCCcCcHHHHHHHHHHHhhhhccCCC-------CHHH----HHHHHHHhccCCCCcCcHHHH
Confidence 4579999999 9 99999999999999763332110000 1123 356899999999999999999
Q ss_pred HHHHhcc
Q psy10339 403 LEMTRRQ 409 (476)
Q Consensus 403 l~~m~~~ 409 (476)
+.++...
T Consensus 74 ~~~~~~~ 80 (88)
T cd00213 74 LVLIGKL 80 (88)
T ss_pred HHHHHHH
Confidence 9988764
No 33
>KOG4223|consensus
Probab=98.32 E-value=8.4e-07 Score=90.57 Aligned_cols=132 Identities=20% Similarity=0.221 Sum_probs=84.6
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHh--cCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhcc
Q psy10339 230 KEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQE--QDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKE 307 (476)
Q Consensus 230 ~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~--~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~ 307 (476)
.|+..+.++++.+ +..++..++-= ..+|. .+=++.-..-+|+||||+|+++||..-|- ...+
T Consensus 168 rFk~AD~d~dg~l---------t~EEF~aFLHPEe~p~M~--~iVi~Etl~d~Dkn~DG~I~~eEfigd~~----~~~~- 231 (325)
T KOG4223|consen 168 RFKAADQDGDGSL---------TLEEFTAFLHPEEHPHMK--DIVIAETLEDIDKNGDGKISLEEFIGDLY----SHEG- 231 (325)
T ss_pred HHhhcccCCCCcc---------cHHHHHhccChhhcchHH--HHHHHHHHhhcccCCCCceeHHHHHhHHh----hccC-
Confidence 3666677777666 66777664311 11121 12236668889999999999999976442 1111
Q ss_pred CCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHH
Q psy10339 308 GMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFK 387 (476)
Q Consensus 308 ~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~ 387 (476)
+.++.+.. .--++++|...|+| +||+++.+|++..+... +-. ....+ +.+++-
T Consensus 232 ~~~epeWv------~~Ere~F~~~~Dkn-----kDG~L~~dEl~~WI~P~----------~~d--~A~~E----A~hL~~ 284 (325)
T KOG4223|consen 232 NEEEPEWV------LTEREQFFEFRDKN-----KDGKLDGDELLDWILPS----------EQD--HAKAE----ARHLLH 284 (325)
T ss_pred CCCCcccc------cccHHHHHHHhhcC-----CCCccCHHHHhcccCCC----------Ccc--HHHHH----HHHHhh
Confidence 11111111 11245788999999 99999999999765321 100 01122 368999
Q ss_pred hccCCCCCcccHHHHHH
Q psy10339 388 EADVNRDRLISWEEFLE 404 (476)
Q Consensus 388 EvD~DgDG~ISfeEFl~ 404 (476)
++|.|+||++|++|-+.
T Consensus 285 eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 285 EADEDKDGKLSKEEILE 301 (325)
T ss_pred hhccCccccccHHHHhh
Confidence 99999999999999874
No 34
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.25 E-value=3.7e-06 Score=71.13 Aligned_cols=62 Identities=19% Similarity=0.290 Sum_probs=50.0
Q ss_pred HHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHH
Q psy10339 324 MREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFL 403 (476)
Q Consensus 324 ~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl 403 (476)
....+|+.||+| ++|.|+.++|..+|...+ . +.+++ ..||..+|.|++|.|+|+||+
T Consensus 11 ~l~~~F~~~D~d-----~~G~Is~~el~~~l~~~~-------~-------~~~ev----~~i~~~~d~~~~g~I~~~eF~ 67 (96)
T smart00027 11 KYEQIFRSLDKN-----QDGTVTGAQAKPILLKSG-------L-------PQTLL----AKIWNLADIDNDGELDKDEFA 67 (96)
T ss_pred HHHHHHHHhCCC-----CCCeEeHHHHHHHHHHcC-------C-------CHHHH----HHHHHHhcCCCCCCcCHHHHH
Confidence 345799999999 999999999999987621 1 11233 568999999999999999999
Q ss_pred HHHhc
Q psy10339 404 EMTRR 408 (476)
Q Consensus 404 ~~m~~ 408 (476)
.++..
T Consensus 68 ~~~~~ 72 (96)
T smart00027 68 LAMHL 72 (96)
T ss_pred HHHHH
Confidence 88765
No 35
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.24 E-value=2.7e-06 Score=75.73 Aligned_cols=61 Identities=20% Similarity=0.218 Sum_probs=48.3
Q ss_pred HHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHH
Q psy10339 323 RMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEF 402 (476)
Q Consensus 323 e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEF 402 (476)
.-..++|..+|+| +||+||.+||..+... . ...++..+|+.+|.|+||.||++||
T Consensus 48 ~~l~w~F~~lD~d-----~DG~Ls~~EL~~~~l~-----------------~---~e~~~~~f~~~~D~n~Dg~IS~~Ef 102 (116)
T cd00252 48 DPVGWMFNQLDGN-----YDGKLSHHELAPIRLD-----------------P---NEHCIKPFFESCDLDKDGSISLDEW 102 (116)
T ss_pred HHHHHHHHHHCCC-----CCCcCCHHHHHHHHcc-----------------c---hHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 3346899999999 9999999999986510 0 0123457999999999999999999
Q ss_pred HHHHhc
Q psy10339 403 LEMTRR 408 (476)
Q Consensus 403 l~~m~~ 408 (476)
.....+
T Consensus 103 ~~cl~~ 108 (116)
T cd00252 103 CYCFIK 108 (116)
T ss_pred HHHHhC
Confidence 998743
No 36
>KOG4251|consensus
Probab=98.22 E-value=2.3e-06 Score=84.94 Aligned_cols=140 Identities=20% Similarity=0.253 Sum_probs=84.9
Q ss_pred CHHhhhhhccCCCCCcccHHHHHHHHHH-------HHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCC----
Q psy10339 272 NPKAFFAMHDLDGNHVWDEEEVKMLFLK-------ELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLD---- 340 (476)
Q Consensus 272 ~pk~~F~l~D~DgDG~Id~eEf~alm~k-------eL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~---- 340 (476)
+.++.|...|.||||.|+|+||..-+.+ ++...+....+ -.+.+ -.+.|..-+++.+|--
T Consensus 141 eSkthFraVDpdgDGhvsWdEykvkFlaskghsekevadairlnee-lkVDe--------EtqevlenlkdRwyqaDspp 211 (362)
T KOG4251|consen 141 ESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVADAIRLNEE-LKVDE--------ETQEVLENLKDRWYQADSPP 211 (362)
T ss_pred hhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHHHHhhccCc-ccccH--------HHHHHHHhhhhhhccccCch
Confidence 3488999999999999999999865531 11111110000 00000 0122333333311111
Q ss_pred CCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhcccC-----CCCC
Q psy10339 341 GNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEF-----NQDP 415 (476)
Q Consensus 341 GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~~~-----~~~~ 415 (476)
.|-.+|..||..++..+. +..-+.-|+..++...|.|||.++|..||+...-..-. +.++
T Consensus 212 adlllteeEflsFLHPEh---------------SrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdidd 276 (362)
T KOG4251|consen 212 ADLLLTEEEFLSFLHPEH---------------SRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDD 276 (362)
T ss_pred hhhhhhHHHHHHHcChHh---------------hhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHH
Confidence 234456688888876532 11234457788999999999999999999976433221 1123
Q ss_pred CCc-----------ccCCCCCCCHHHHHHHH
Q psy10339 416 GWK-----------PIDQEQVYSQAEVEAYE 435 (476)
Q Consensus 416 ~w~-----------~~d~~g~is~~EL~~~~ 435 (476)
-|. ..+.||..|.+||..|.
T Consensus 277 nwvkdRkkEFeElIDsNhDGivTaeELe~y~ 307 (362)
T KOG4251|consen 277 NWVKDRKKEFEELIDSNHDGIVTAEELEDYV 307 (362)
T ss_pred HHHHHHHHHHHHHhhcCCccceeHHHHHhhc
Confidence 454 23689999999999997
No 37
>PLN02964 phosphatidylserine decarboxylase
Probab=98.18 E-value=6.4e-06 Score=91.62 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=72.1
Q ss_pred CHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHH
Q psy10339 272 NPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVK 351 (476)
Q Consensus 272 ~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~ 351 (476)
+.+++|.++|.|+||.| +..++.. ++...+... ....++.+|+.+|.| ++|.|+.+||.
T Consensus 144 elkeaF~lfD~dgdG~i----Lg~ilrs-----lG~~~pte~-------e~~fi~~mf~~~D~D-----gdG~IdfdEFl 202 (644)
T PLN02964 144 SACESFDLLDPSSSNKV----VGSIFVS-----CSIEDPVET-------ERSFARRILAIVDYD-----EDGQLSFSEFS 202 (644)
T ss_pred HHHHHHHHHCCCCCCcC----HHHHHHH-----hCCCCCCHH-------HHHHHHHHHHHhCCC-----CCCeEcHHHHH
Confidence 34788999999999997 5444421 221112111 112356899999999 99999999999
Q ss_pred HHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhccc
Q psy10339 352 MLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410 (476)
Q Consensus 352 ~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~~ 410 (476)
.++...+. . .+.+++ ..+|+.+|.|+||.|+++||..++....
T Consensus 203 ~lL~~lg~-----~-------~seEEL----~eaFk~fDkDgdG~Is~dEL~~vL~~~~ 245 (644)
T PLN02964 203 DLIKAFGN-----L-------VAANKK----EELFKAADLNGDGVVTIDELAALLALQQ 245 (644)
T ss_pred HHHHHhcc-----C-------CCHHHH----HHHHHHhCCCCCCcCCHHHHHHHHHhcc
Confidence 99875321 1 122343 4689999999999999999999988743
No 38
>KOG0044|consensus
Probab=98.14 E-value=1.5e-05 Score=76.90 Aligned_cols=128 Identities=15% Similarity=0.122 Sum_probs=85.0
Q ss_pred HhhhhhccCCC-CCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHH
Q psy10339 274 KAFFAMHDLDG-NHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKM 352 (476)
Q Consensus 274 k~~F~l~D~Dg-DG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~ 352 (476)
+.+++.|=.+- +|.++-++|..++. .+-+...... ....+|+.||.| +||.|+..||..
T Consensus 29 ~~~Yr~Fk~~cP~G~~~~~~F~~i~~-----~~fp~gd~~~----------y~~~vF~~fD~~-----~dg~i~F~Efi~ 88 (193)
T KOG0044|consen 29 QQWYRGFKNECPSGRLTLEEFREIYA-----SFFPDGDASK----------YAELVFRTFDKN-----KDGTIDFLEFIC 88 (193)
T ss_pred HHHHHHhcccCCCCccCHHHHHHHHH-----HHCCCCCHHH----------HHHHHHHHhccc-----CCCCcCHHHHHH
Confidence 55555555554 99999999987663 2223222222 235799999999 999999999888
Q ss_pred HHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhccc--CCC------C-------C-C
Q psy10339 353 LFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQE--FNQ------D-------P-G 416 (476)
Q Consensus 353 ~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~~--~~~------~-------~-~ 416 (476)
++.-... + +.++. +.-.|+.+|.||||.|+++|++.++..-- ... . + -
T Consensus 89 als~~~r------G-------t~eek---l~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~i 152 (193)
T KOG0044|consen 89 ALSLTSR------G-------TLEEK---LKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKI 152 (193)
T ss_pred HHHHHcC------C-------cHHHH---hhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHH
Confidence 7754221 0 11222 23469999999999999999998765421 110 1 1 1
Q ss_pred Ccc--cCCCCCCCHHHHHHHHHH
Q psy10339 417 WKP--IDQEQVYSQAEVEAYERQ 437 (476)
Q Consensus 417 w~~--~d~~g~is~~EL~~~~~~ 437 (476)
|.. .|+||.+|-+|.......
T Consensus 153 f~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 153 FSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred HHHcCCCCCCcccHHHHHHHhhh
Confidence 332 378999999988776644
No 39
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.13 E-value=2.9e-06 Score=64.01 Aligned_cols=52 Identities=31% Similarity=0.471 Sum_probs=39.7
Q ss_pred CccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhc
Q psy10339 342 NHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408 (476)
Q Consensus 342 DG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~ 408 (476)
+|.||.++|+.++...+.. .. +.+++ ..+|..+|.|+||.|||+||+.++..
T Consensus 2 ~G~i~~~~~~~~l~~~g~~----~~-------s~~e~----~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIK----DL-------SEEEV----DRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSS----SS-------CHHHH----HHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCC----CC-------CHHHH----HHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 6999999999999542211 01 12333 56899999999999999999998864
No 40
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.10 E-value=1.3e-05 Score=67.98 Aligned_cols=69 Identities=17% Similarity=0.226 Sum_probs=52.3
Q ss_pred HHhhhhhcc-CCCCC-cccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHH
Q psy10339 273 PKAFFAMHD-LDGNH-VWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350 (476)
Q Consensus 273 pk~~F~l~D-~DgDG-~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL 350 (476)
+..+|..|| .|||| +|+..||..++..++...+....... .++.+|+.+|.| +||.|+.+||
T Consensus 12 ~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~-----------~v~~i~~elD~n-----~dG~Idf~EF 75 (93)
T cd05026 12 LIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPM-----------LVDKIMNDLDSN-----KDNEVDFNEF 75 (93)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHH-----------HHHHHHHHhCCC-----CCCCCCHHHH
Confidence 488899999 79999 59999999998765432222211222 245799999999 9999999999
Q ss_pred HHHHHHH
Q psy10339 351 KMLFLKE 357 (476)
Q Consensus 351 ~~~~~~e 357 (476)
..++...
T Consensus 76 ~~l~~~l 82 (93)
T cd05026 76 VVLVAAL 82 (93)
T ss_pred HHHHHHH
Confidence 9988664
No 41
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.07 E-value=2e-05 Score=66.63 Aligned_cols=68 Identities=21% Similarity=0.224 Sum_probs=55.6
Q ss_pred HHhhhhhcc-CCCCC-cccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHH
Q psy10339 273 PKAFFAMHD-LDGNH-VWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350 (476)
Q Consensus 273 pk~~F~l~D-~DgDG-~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL 350 (476)
++.+|..|| .|||| +|+.+||..+|..++....+...+..++. .+++.+|.| ++|.|+.+||
T Consensus 10 l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~-----------~~i~~~D~n-----~dG~v~f~eF 73 (88)
T cd05027 10 LIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVD-----------KVMETLDSD-----GDGECDFQEF 73 (88)
T ss_pred HHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHH-----------HHHHHhCCC-----CCCcCcHHHH
Confidence 588999998 89999 69999999999887766655544443343 788999999 9999999999
Q ss_pred HHHHHH
Q psy10339 351 KMLFLK 356 (476)
Q Consensus 351 ~~~~~~ 356 (476)
..++..
T Consensus 74 ~~li~~ 79 (88)
T cd05027 74 MAFVAM 79 (88)
T ss_pred HHHHHH
Confidence 987754
No 42
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.05 E-value=1.5e-05 Score=67.02 Aligned_cols=69 Identities=28% Similarity=0.442 Sum_probs=49.8
Q ss_pred HHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHH
Q psy10339 327 HVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMT 406 (476)
Q Consensus 327 ~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m 406 (476)
.+|..|+...+ .+|+||.+||+.+|...++....... ..++ ++.||+.+|.|+||.|+|+||+.++
T Consensus 12 ~~f~~y~~~~~---~~~~Is~~El~~ll~~~~g~~~t~~~-------~~~~----v~~i~~~~D~d~dG~I~f~eF~~~~ 77 (88)
T cd05030 12 NVFHQYSVRKG---HPDTLYKKEFKQLVEKELPNFLKKEK-------NQKA----IDKIFEDLDTNQDGQLSFEEFLVLV 77 (88)
T ss_pred HHHHHHhccCC---CcccCCHHHHHHHHHHHhhHhhccCC-------CHHH----HHHHHHHcCCCCCCcCcHHHHHHHH
Confidence 57888886621 58999999999999765443211000 0123 3678999999999999999999988
Q ss_pred hcc
Q psy10339 407 RRQ 409 (476)
Q Consensus 407 ~~~ 409 (476)
...
T Consensus 78 ~~~ 80 (88)
T cd05030 78 IKV 80 (88)
T ss_pred HHH
Confidence 753
No 43
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=97.92 E-value=5.6e-05 Score=63.50 Aligned_cols=68 Identities=24% Similarity=0.328 Sum_probs=51.8
Q ss_pred HHhhhhhcc-CCCCC-cccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHH
Q psy10339 273 PKAFFAMHD-LDGNH-VWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350 (476)
Q Consensus 273 pk~~F~l~D-~DgDG-~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL 350 (476)
++++|..|| .||+| .|+..||..++..++...++...+.. .++.+|+.+|.| ++|.|+.+++
T Consensus 11 l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~-----------~v~~i~~~~D~d-----~~G~I~f~eF 74 (92)
T cd05025 11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDAD-----------AVDKIMKELDEN-----GDGEVDFQEF 74 (92)
T ss_pred HHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHH-----------HHHHHHHHHCCC-----CCCcCcHHHH
Confidence 488999997 99999 59999999998654432222211222 244799999999 9999999999
Q ss_pred HHHHHH
Q psy10339 351 KMLFLK 356 (476)
Q Consensus 351 ~~~~~~ 356 (476)
..++..
T Consensus 75 ~~l~~~ 80 (92)
T cd05025 75 VVLVAA 80 (92)
T ss_pred HHHHHH
Confidence 998765
No 44
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.86 E-value=5.3e-05 Score=63.96 Aligned_cols=68 Identities=24% Similarity=0.218 Sum_probs=50.3
Q ss_pred HHhhhhhccC-CC-CCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHH
Q psy10339 273 PKAFFAMHDL-DG-NHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350 (476)
Q Consensus 273 pk~~F~l~D~-Dg-DG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL 350 (476)
+..+|..||. || +|+|+..||..++...+...++...+.. ....+|+.+|.| ++|.|+.+||
T Consensus 10 l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~-----------ei~~~~~~~D~~-----~dg~I~f~eF 73 (94)
T cd05031 10 LILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPM-----------AVDKIMKDLDQN-----RDGKVNFEEF 73 (94)
T ss_pred HHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHH-----------HHHHHHHHhCCC-----CCCcCcHHHH
Confidence 4789999997 98 6999999999988543221112121222 234789999999 9999999999
Q ss_pred HHHHHH
Q psy10339 351 KMLFLK 356 (476)
Q Consensus 351 ~~~~~~ 356 (476)
..++..
T Consensus 74 ~~l~~~ 79 (94)
T cd05031 74 VSLVAG 79 (94)
T ss_pred HHHHHH
Confidence 988764
No 45
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.86 E-value=1.2e-05 Score=54.96 Aligned_cols=26 Identities=38% Similarity=0.659 Sum_probs=23.7
Q ss_pred HHHHHhccCCCCCcccHHHHHHHHhc
Q psy10339 383 EHVFKEADVNRDRLISWEEFLEMTRR 408 (476)
Q Consensus 383 e~mi~EvD~DgDG~ISfeEFl~~m~~ 408 (476)
..+|+.+|+||||.||++||+.+|++
T Consensus 3 ~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 3 KEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 45899999999999999999999874
No 46
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.85 E-value=3.1e-05 Score=56.65 Aligned_cols=60 Identities=28% Similarity=0.477 Sum_probs=47.0
Q ss_pred HHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy10339 326 EHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405 (476)
Q Consensus 326 e~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~ 405 (476)
..+|+.+|.| ++|.|+..++..++...+. .. +.+. +..++..+|.|++|.|++++|+.+
T Consensus 3 ~~~f~~~d~~-----~~g~l~~~e~~~~l~~~~~-----~~-------~~~~----~~~~~~~~~~~~~~~l~~~ef~~~ 61 (63)
T cd00051 3 REAFRLFDKD-----GDGTISADELKAALKSLGE-----GL-------SEEE----IDEMIREVDKDGDGKIDFEEFLEL 61 (63)
T ss_pred HHHHHHhCCC-----CCCcCcHHHHHHHHHHhCC-----CC-------CHHH----HHHHHHHhCCCCCCeEeHHHHHHH
Confidence 3689999999 9999999999999876321 11 1112 245899999999999999999876
Q ss_pred H
Q psy10339 406 T 406 (476)
Q Consensus 406 m 406 (476)
+
T Consensus 62 ~ 62 (63)
T cd00051 62 M 62 (63)
T ss_pred h
Confidence 5
No 47
>KOG0031|consensus
Probab=97.85 E-value=0.00013 Score=68.28 Aligned_cols=108 Identities=21% Similarity=0.240 Sum_probs=82.4
Q ss_pred HHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHH
Q psy10339 325 REHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLE 404 (476)
Q Consensus 325 re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~ 404 (476)
.+++|...|.| +||.|+.++|+..+.+.+... +.+++ ++||+++ .|-|+|-=|+.
T Consensus 34 fKEAF~~mDqn-----rDG~IdkeDL~d~~aSlGk~~------------~d~el----DaM~~Ea----~gPINft~FLT 88 (171)
T KOG0031|consen 34 FKEAFNLMDQN-----RDGFIDKEDLRDMLASLGKIA------------SDEEL----DAMMKEA----PGPINFTVFLT 88 (171)
T ss_pred HHHHHHHHhcc-----CCCcccHHHHHHHHHHcCCCC------------CHHHH----HHHHHhC----CCCeeHHHHHH
Confidence 34799999999 999999999999998854321 22344 4577775 67999999999
Q ss_pred HHhcccCCCC------CCCcccC--CCCCCCHHHHHHHHHHHH-----HHHHHHHHcCCCCCCCCc
Q psy10339 405 MTRRQEFNQD------PGWKPID--QEQVYSQAEVEAYERQRQ-----AEVDRLVREGKIPSIPPQ 457 (476)
Q Consensus 405 ~m~~~~~~~~------~~w~~~d--~~g~is~~EL~~~~~~l~-----eE~~~mi~~~~~~~~~~~ 457 (476)
|+...-...+ .+|..+| +.|.|..+.|++++...+ +||..|.+.--+.-++..
T Consensus 89 mfGekL~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~ 154 (171)
T KOG0031|consen 89 MFGEKLNGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNF 154 (171)
T ss_pred HHHHHhcCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCce
Confidence 9877654443 4788886 569999999999998775 999999987544334443
No 48
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=97.83 E-value=4.5e-05 Score=64.52 Aligned_cols=69 Identities=9% Similarity=0.182 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 219 MTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 219 l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
||+++...+.+.|..++++++|.+ +..+|..+++.. |+.. -++..+|..+|.|++|.|+++||..++.
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~I---------s~~el~~~l~~~-~~~~--~ev~~i~~~~d~~~~g~I~~~eF~~~~~ 71 (96)
T smart00027 4 ISPEDKAKYEQIFRSLDKNQDGTV---------TGAQAKPILLKS-GLPQ--TLLAKIWNLADIDNDGELDKDEFALAMH 71 (96)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeE---------eHHHHHHHHHHc-CCCH--HHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 789999999999999999999989 899999999885 7643 4568999999999999999999999886
Q ss_pred H
Q psy10339 299 K 299 (476)
Q Consensus 299 k 299 (476)
.
T Consensus 72 ~ 72 (96)
T smart00027 72 L 72 (96)
T ss_pred H
Confidence 4
No 49
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.83 E-value=3.8e-05 Score=68.40 Aligned_cols=58 Identities=16% Similarity=0.177 Sum_probs=46.7
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKM 352 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~ 352 (476)
+.-+|..+|+|+||+||.+||..++ +. +. ......+|..+|.| +||.||.+||..
T Consensus 50 l~w~F~~lD~d~DG~Ls~~EL~~~~-------l~---~~----------e~~~~~f~~~~D~n-----~Dg~IS~~Ef~~ 104 (116)
T cd00252 50 VGWMFNQLDGNYDGKLSHHELAPIR-------LD---PN----------EHCIKPFFESCDLD-----KDGSISLDEWCY 104 (116)
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH-------cc---ch----------HHHHHHHHHHHCCC-----CCCCCCHHHHHH
Confidence 5788999999999999999998653 11 11 11234799999999 999999999999
Q ss_pred HHH
Q psy10339 353 LFL 355 (476)
Q Consensus 353 ~~~ 355 (476)
+|.
T Consensus 105 cl~ 107 (116)
T cd00252 105 CFI 107 (116)
T ss_pred HHh
Confidence 883
No 50
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=97.82 E-value=4.8e-05 Score=64.68 Aligned_cols=66 Identities=21% Similarity=0.199 Sum_probs=52.3
Q ss_pred HHhhhhhccC-CCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHH
Q psy10339 273 PKAFFAMHDL-DGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVK 351 (476)
Q Consensus 273 pk~~F~l~D~-DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~ 351 (476)
+..+|+.||. +++|+|+.+||..+|..++...+. ...+ .+.+|+.+|.| +||.|+.+||.
T Consensus 10 l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls---~~~~-----------v~~mi~~~D~d-----~DG~I~F~EF~ 70 (89)
T cd05022 10 LVSNFHKASVKGGKESLTASEFQELLTQQLPHLLK---DVEG-----------LEEKMKNLDVN-----QDSKLSFEEFW 70 (89)
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhcc---CHHH-----------HHHHHHHhCCC-----CCCCCcHHHHH
Confidence 4889999999 999999999999999766532111 1022 34789999999 99999999999
Q ss_pred HHHHHH
Q psy10339 352 MLFLKE 357 (476)
Q Consensus 352 ~~~~~e 357 (476)
.++.+.
T Consensus 71 ~l~~~l 76 (89)
T cd05022 71 ELIGEL 76 (89)
T ss_pred HHHHHH
Confidence 888653
No 51
>KOG0034|consensus
Probab=97.78 E-value=6.8e-05 Score=71.98 Aligned_cols=69 Identities=29% Similarity=0.385 Sum_probs=54.2
Q ss_pred HhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHH
Q psy10339 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKML 353 (476)
Q Consensus 274 k~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~ 353 (476)
+-+|+++|.|++|+|+.+|+..++. .+.+.+... .......+.+.+|..+|.| +||+||.+||..+
T Consensus 107 ~faF~vYD~~~~G~I~reel~~iv~----~~~~~~~~~-----~~e~~~~i~d~t~~e~D~d-----~DG~IsfeEf~~~ 172 (187)
T KOG0034|consen 107 RFAFRVYDLDGDGFISREELKQILR----MMVGENDDM-----SDEQLEDIVDKTFEEADTD-----GDGKISFEEFCKV 172 (187)
T ss_pred HHHHHHhcCCCCCcCcHHHHHHHHH----HHHccCCcc-----hHHHHHHHHHHHHHHhCCC-----CCCcCcHHHHHHH
Confidence 4489999999999999999998874 344444331 1123456778899999999 9999999999999
Q ss_pred HHH
Q psy10339 354 FLK 356 (476)
Q Consensus 354 ~~~ 356 (476)
+.+
T Consensus 173 v~~ 175 (187)
T KOG0034|consen 173 VEK 175 (187)
T ss_pred HHc
Confidence 864
No 52
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.77 E-value=1.6e-05 Score=54.33 Aligned_cols=26 Identities=35% Similarity=0.331 Sum_probs=24.0
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
++.+|+.+|+||||+||++||..+|.
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMK 27 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 57899999999999999999998874
No 53
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.77 E-value=9.2e-05 Score=63.58 Aligned_cols=65 Identities=15% Similarity=0.313 Sum_probs=48.8
Q ss_pred HHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHH
Q psy10339 327 HVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMT 406 (476)
Q Consensus 327 ~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m 406 (476)
.+|..|-- +.|.+|..||+.++.+++..+.+... + + ..++.+|+..|.|+||.|+|.||+.++
T Consensus 12 ~~FhkYaG------~~~tLsk~Elk~Ll~~Elp~~l~~~~-d------~----~~vd~im~~LD~n~Dg~vdF~EF~~Lv 74 (91)
T cd05024 12 LTFHKFAG------EKNYLNRDDLQKLMEKEFSEFLKNQN-D------P----MAVDKIMKDLDDCRDGKVGFQSFFSLI 74 (91)
T ss_pred HHHHHHcC------CCCcCCHHHHHHHHHHHhHHHHcCCC-C------H----HHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 35666652 45799999999999998876543321 1 1 134679999999999999999999987
Q ss_pred hc
Q psy10339 407 RR 408 (476)
Q Consensus 407 ~~ 408 (476)
..
T Consensus 75 ~~ 76 (91)
T cd05024 75 AG 76 (91)
T ss_pred HH
Confidence 65
No 54
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.77 E-value=8.1e-05 Score=57.42 Aligned_cols=60 Identities=22% Similarity=0.359 Sum_probs=47.7
Q ss_pred HhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHH
Q psy10339 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKML 353 (476)
Q Consensus 274 k~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~ 353 (476)
+.+|..+|+|++|.|+.+||..++.. . +.+... ...+|+.+|.| ++|.|+..|+..+
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~-----~--g~~~~~-----------~~~i~~~~d~~-----~~g~i~~~ef~~~ 58 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGK-----S--GLPRSV-----------LAQIWDLADTD-----KDGKLDKEEFAIA 58 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHH-----c--CCCHHH-----------HHHHHHHhcCC-----CCCcCCHHHHHHH
Confidence 57899999999999999999988742 1 222222 34789999999 9999999999987
Q ss_pred HHH
Q psy10339 354 FLK 356 (476)
Q Consensus 354 ~~~ 356 (476)
+..
T Consensus 59 ~~~ 61 (67)
T cd00052 59 MHL 61 (67)
T ss_pred HHH
Confidence 753
No 55
>KOG0377|consensus
Probab=97.76 E-value=0.00028 Score=75.12 Aligned_cols=118 Identities=18% Similarity=0.193 Sum_probs=75.6
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHHHHHH---------HHHhccCCChhh------H--------hHHH--------HHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLFLKEL---------DKMYKEGMPQND------L--------MERA--------EEM 321 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm~keL---------~k~~~~~d~e~d------~--------~e~~--------~~~ 321 (476)
+...|+.+|...+|+|+......||..-+ ..-+.+++.++. + .+.. ...
T Consensus 466 L~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetLYr~ 545 (631)
T KOG0377|consen 466 LEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVETLYRN 545 (631)
T ss_pred HHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHHHHhc
Confidence 46679999999999999999999986311 111112222211 0 0000 011
Q ss_pred HHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHH
Q psy10339 322 ERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEE 401 (476)
Q Consensus 322 ~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeE 401 (476)
..-.+.+|+..|.| ++|.||.+||+.+..- +.+-+....+++ ++ ..+-+.+|.|+||.|++.|
T Consensus 546 ks~LetiF~~iD~D-----~SG~isldEF~~a~~l-~~sh~~~~i~~~-------~i----~~la~~mD~NkDG~IDlNE 608 (631)
T KOG0377|consen 546 KSSLETIFNIIDAD-----NSGEISLDEFRTAWKL-LSSHMNGAISDD-------EI----LELARSMDLNKDGKIDLNE 608 (631)
T ss_pred hhhHHHHHHHhccC-----CCCceeHHHHHHHHHH-HHhhcCCCcCHH-------HH----HHHHHhhccCCCCcccHHH
Confidence 22346799999999 9999999999998643 222222222222 22 3466789999999999999
Q ss_pred HHHHHh
Q psy10339 402 FLEMTR 407 (476)
Q Consensus 402 Fl~~m~ 407 (476)
|++...
T Consensus 609 fLeAFr 614 (631)
T KOG0377|consen 609 FLEAFR 614 (631)
T ss_pred HHHHHh
Confidence 997543
No 56
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.76 E-value=0.00013 Score=60.39 Aligned_cols=68 Identities=22% Similarity=0.225 Sum_probs=50.0
Q ss_pred HHhhhhhccC--CCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHH
Q psy10339 273 PKAFFAMHDL--DGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350 (476)
Q Consensus 273 pk~~F~l~D~--DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL 350 (476)
++.+|..+|+ |++|.|+.+||..++...+............ ...+|+.+|.| ++|.|+.++|
T Consensus 10 l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~e-----------i~~i~~~~d~~-----~~g~I~f~eF 73 (88)
T cd00213 10 IIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEA-----------VDKIMKDLDVN-----KDGKVDFQEF 73 (88)
T ss_pred HHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHH-----------HHHHHHHhccC-----CCCcCcHHHH
Confidence 4788999999 8999999999999885432111111111222 34689999999 9999999999
Q ss_pred HHHHHH
Q psy10339 351 KMLFLK 356 (476)
Q Consensus 351 ~~~~~~ 356 (476)
..++..
T Consensus 74 ~~~~~~ 79 (88)
T cd00213 74 LVLIGK 79 (88)
T ss_pred HHHHHH
Confidence 998765
No 57
>KOG0036|consensus
Probab=97.68 E-value=0.0001 Score=77.72 Aligned_cols=128 Identities=16% Similarity=0.229 Sum_probs=88.4
Q ss_pred HHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHH
Q psy10339 324 MREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFL 403 (476)
Q Consensus 324 ~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl 403 (476)
.+..+|+.||.+ ++|.++..+|...+.+... + ... .+. +..+|+.+|.|.||.++|+||.
T Consensus 15 r~~~lf~~lD~~-----~~g~~d~~~l~k~~~~l~~----~-~~~-------~~~---~~~l~~~~d~~~dg~vDy~eF~ 74 (463)
T KOG0036|consen 15 RIRCLFKELDSK-----NDGQVDLDQLEKGLEKLDH----P-KPN-------YEA---AKMLFSAMDANRDGRVDYSEFK 74 (463)
T ss_pred HHHHHHHHhccC-----CCCceeHHHHHHHHHhcCC----C-CCc-------hHH---HHHHHHhcccCcCCcccHHHHH
Confidence 456799999999 9999999999988765211 1 011 122 2358999999999999999999
Q ss_pred HHHhcccCCCCCCCcc--cCCCCCCCHHHHHHHHHHHH-----HH----HHHHHHcCCCCCCCCcccccCCCCCchHHh
Q psy10339 404 EMTRRQEFNQDPGWKP--IDQEQVYSQAEVEAYERQRQ-----AE----VDRLVREGKIPSIPPQYAHYGHRRPSRAIQ 471 (476)
Q Consensus 404 ~~m~~~~~~~~~~w~~--~d~~g~is~~EL~~~~~~l~-----eE----~~~mi~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (476)
..+...+..-..-|+. .++||.|+..|+..+++.++ ++ +.+|-+.|.---++..++.|=---|+.-|.
T Consensus 75 ~Y~~~~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p~s~i~ 153 (463)
T KOG0036|consen 75 RYLDNKELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYPESDLE 153 (463)
T ss_pred HHHHHhHHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCChhHHH
Confidence 9988764322233443 47999999999999998885 44 445777776444444444444444444443
No 58
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.62 E-value=0.00023 Score=51.95 Aligned_cols=61 Identities=25% Similarity=0.391 Sum_probs=46.6
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKM 352 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~ 352 (476)
+..+|..+|.|++|.|++.||..++.. .....+.. ....+|+.+|.| ++|.|+.+++..
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~-----~~~~~~~~-----------~~~~~~~~~~~~-----~~~~l~~~ef~~ 60 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKS-----LGEGLSEE-----------EIDEMIREVDKD-----GDGKIDFEEFLE 60 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHH-----hCCCCCHH-----------HHHHHHHHhCCC-----CCCeEeHHHHHH
Confidence 467899999999999999999987742 12222222 234689999999 999999999986
Q ss_pred HH
Q psy10339 353 LF 354 (476)
Q Consensus 353 ~~ 354 (476)
++
T Consensus 61 ~~ 62 (63)
T cd00051 61 LM 62 (63)
T ss_pred Hh
Confidence 54
No 59
>KOG0037|consensus
Probab=97.61 E-value=0.00057 Score=66.96 Aligned_cols=126 Identities=14% Similarity=0.100 Sum_probs=91.0
Q ss_pred CHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHH
Q psy10339 272 NPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVK 351 (476)
Q Consensus 272 ~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~ 351 (476)
.+-..|..+|+|+.|.|+.+|+.+++.. +.. .-|. .+-.+-+..+||.+ .+|.|...|+.
T Consensus 58 ~~~~~f~~vD~d~sg~i~~~eLq~aLsn--------~~~-~~Fs------~~TcrlmI~mfd~~-----~~G~i~f~EF~ 117 (221)
T KOG0037|consen 58 QLAGWFQSVDRDRSGRILAKELQQALSN--------GTW-SPFS------IETCRLMISMFDRD-----NSGTIGFKEFK 117 (221)
T ss_pred HHHHHHHhhCccccccccHHHHHHHhhc--------CCC-CCCC------HHHHHHHHHHhcCC-----CCCccCHHHHH
Confidence 3577899999999999999999887631 100 1111 11234577899999 99999999999
Q ss_pred HHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhcccCCCCCCCc-----ccC-C-CC
Q psy10339 352 MLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWK-----PID-Q-EQ 424 (476)
Q Consensus 352 ~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~~~~~~~~w~-----~~d-~-~g 424 (476)
+++.. + .-|..+++.+|+|+.|.|+..|+.......-+.-++.+- .+| . +|
T Consensus 118 ~Lw~~---------------------i-~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g 175 (221)
T KOG0037|consen 118 ALWKY---------------------I-NQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGG 175 (221)
T ss_pred HHHHH---------------------H-HHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCC
Confidence 98754 1 126789999999999999999999988876453332221 223 4 89
Q ss_pred CCCHHHHHHHHHHHH
Q psy10339 425 VYSQAEVEAYERQRQ 439 (476)
Q Consensus 425 ~is~~EL~~~~~~l~ 439 (476)
.|.-++.-++.-.|.
T Consensus 176 ~i~FD~FI~ccv~L~ 190 (221)
T KOG0037|consen 176 RIDFDDFIQCCVVLQ 190 (221)
T ss_pred ceeHHHHHHHHHHHH
Confidence 999988877775543
No 60
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.58 E-value=0.00028 Score=59.85 Aligned_cols=68 Identities=21% Similarity=0.210 Sum_probs=52.7
Q ss_pred HHhhhhh-ccCCCCC-cccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHH
Q psy10339 273 PKAFFAM-HDLDGNH-VWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350 (476)
Q Consensus 273 pk~~F~l-~D~DgDG-~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL 350 (476)
+..+|+. +|.||+| +|+.+||..++..++.........+. .++.+|+.+|.| +||.|+.+|+
T Consensus 11 l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~-----------~~~~ll~~~D~d-----~DG~I~f~EF 74 (89)
T cd05023 11 LIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPG-----------VLDRMMKKLDLN-----SDGQLDFQEF 74 (89)
T ss_pred HHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHH-----------HHHHHHHHcCCC-----CCCcCcHHHH
Confidence 3778888 8899987 99999999999877644433222222 244789999999 9999999999
Q ss_pred HHHHHH
Q psy10339 351 KMLFLK 356 (476)
Q Consensus 351 ~~~~~~ 356 (476)
..++..
T Consensus 75 ~~l~~~ 80 (89)
T cd05023 75 LNLIGG 80 (89)
T ss_pred HHHHHH
Confidence 988765
No 61
>KOG0030|consensus
Probab=97.56 E-value=0.00028 Score=65.02 Aligned_cols=109 Identities=19% Similarity=0.197 Sum_probs=74.6
Q ss_pred HHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCC--CCCcccHHHH
Q psy10339 325 REHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVN--RDRLISWEEF 402 (476)
Q Consensus 325 re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~D--gDG~ISfeEF 402 (476)
.+++|..||+. |||.|+...+..+++..+. +.+ ..++ -..+...+.+ +--+|+|++|
T Consensus 13 ~ke~F~lfD~~-----gD~ki~~~q~gdvlRalG~-----nPT-------~aeV----~k~l~~~~~~~~~~~rl~FE~f 71 (152)
T KOG0030|consen 13 FKEAFLLFDRT-----GDGKISGSQVGDVLRALGQ-----NPT-------NAEV----LKVLGQPKRREMNVKRLDFEEF 71 (152)
T ss_pred HHHHHHHHhcc-----CcccccHHHHHHHHHHhcC-----CCc-------HHHH----HHHHcCcccchhhhhhhhHHHH
Confidence 45799999999 9999999999999987542 111 1233 2356666665 4467888888
Q ss_pred HHHHhcccCCCC--------CCCccc--CCCCCCCHHHHHHHHHHHH-----HHHHHHHHcCCCCCCC
Q psy10339 403 LEMTRRQEFNQD--------PGWKPI--DQEQVYSQAEVEAYERQRQ-----AEVDRLVREGKIPSIP 455 (476)
Q Consensus 403 l~~m~~~~~~~~--------~~w~~~--d~~g~is~~EL~~~~~~l~-----eE~~~mi~~~~~~~~~ 455 (476)
+-|...-..+.. .+.+.+ +++|.|...||+.++..+| +|+..|++ |...+.+
T Consensus 72 Lpm~q~vaknk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Lla-g~eD~nG 138 (152)
T KOG0030|consen 72 LPMYQQVAKNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLA-GQEDSNG 138 (152)
T ss_pred HHHHHHHHhccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHc-cccccCC
Confidence 887665432222 233333 6899999999999998886 77777664 4444443
No 62
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.51 E-value=0.00031 Score=74.38 Aligned_cols=53 Identities=25% Similarity=0.300 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHH
Q psy10339 322 ERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEE 401 (476)
Q Consensus 322 ~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeE 401 (476)
......+|+.||.| |||+|+.+||.. ++.||..+|.|+||.||++|
T Consensus 333 ~~~l~~aF~~~D~d-----gdG~Is~~E~~~-----------------------------~~~~F~~~D~d~DG~Is~eE 378 (391)
T PRK12309 333 THAAQEIFRLYDLD-----GDGFITREEWLG-----------------------------SDAVFDALDLNHDGKITPEE 378 (391)
T ss_pred hHHHHHHHHHhCCC-----CCCcCcHHHHHH-----------------------------HHHHHHHhCCCCCCCCcHHH
Confidence 34456799999999 999999999842 02479999999999999999
Q ss_pred HHHHHhc
Q psy10339 402 FLEMTRR 408 (476)
Q Consensus 402 Fl~~m~~ 408 (476)
|...+..
T Consensus 379 f~~~~~~ 385 (391)
T PRK12309 379 MRAGLGA 385 (391)
T ss_pred HHHHHHH
Confidence 9998765
No 63
>KOG0041|consensus
Probab=97.47 E-value=0.00033 Score=68.07 Aligned_cols=63 Identities=27% Similarity=0.304 Sum_probs=48.8
Q ss_pred HHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHH
Q psy10339 325 REHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLE 404 (476)
Q Consensus 325 re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~ 404 (476)
...+|+.||.| -||+|+..||+..|-+.+. +...- -...||+++|-|.||+|||-||+-
T Consensus 101 ~~~~Fk~yDe~-----rDgfIdl~ELK~mmEKLga---------------pQTHL-~lK~mikeVded~dgklSfreflL 159 (244)
T KOG0041|consen 101 AESMFKQYDED-----RDGFIDLMELKRMMEKLGA---------------PQTHL-GLKNMIKEVDEDFDGKLSFREFLL 159 (244)
T ss_pred HHHHHHHhccc-----ccccccHHHHHHHHHHhCC---------------chhhH-HHHHHHHHhhcccccchhHHHHHH
Confidence 34689999999 9999999999998876432 11111 135689999999999999999986
Q ss_pred HHhc
Q psy10339 405 MTRR 408 (476)
Q Consensus 405 ~m~~ 408 (476)
+...
T Consensus 160 Ifrk 163 (244)
T KOG0041|consen 160 IFRK 163 (244)
T ss_pred HHHH
Confidence 6544
No 64
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.32 E-value=0.0002 Score=47.19 Aligned_cols=23 Identities=35% Similarity=0.602 Sum_probs=20.9
Q ss_pred HHHHhccCCCCCcccHHHHHHHH
Q psy10339 384 HVFKEADVNRDRLISWEEFLEMT 406 (476)
Q Consensus 384 ~mi~EvD~DgDG~ISfeEFl~~m 406 (476)
.+|..+|+|+||.||++||.+++
T Consensus 3 ~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 3 DAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHTTTSSSEEEHHHHHHHH
T ss_pred HHHHHHcCCCCCcCCHHHHHHHC
Confidence 47999999999999999998864
No 65
>KOG2562|consensus
Probab=97.27 E-value=0.0046 Score=66.35 Aligned_cols=221 Identities=14% Similarity=0.180 Sum_probs=124.8
Q ss_pred CCCCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCHHHHHHHHHHHHHHHHhhc
Q psy10339 160 PDAPGHVDHNNPHSFEINDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRK 239 (476)
Q Consensus 160 ~~~~~h~d~~n~~~f~~~dl~~li~~~~~dl~~~d~~r~~~fk~yem~k~~e~~~~~~~l~eeer~e~~~~~~e~~~~~~ 239 (476)
.+.|.-+++.+...-++..+-+...+.. .+...|-.+|-+--++ ....+|+. ..=+.+++.+- .
T Consensus 142 ~~~f~k~~~d~~g~it~~~Fi~~~~~~~----~l~~t~~~~~v~~l~~---~~~~yl~q---~df~~~Lqeli---~--- 205 (493)
T KOG2562|consen 142 ASTFRKIDGDDTGHITRDKFINYWMRGL----MLTHTRLEQFVNLLIQ---AGCSYLRQ---DDFKPYLQELI---A--- 205 (493)
T ss_pred hhhhhhhccCcCCceeHHHHHHHHHhhh----hHHHHHHHHHHHHHhc---cCccceec---cccHHHHHHHH---h---
Confidence 4556666666554445444433333222 5556666655544332 22333333 22222332221 1
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHH-HHHHHHhccCCChhhHhHHH
Q psy10339 240 SNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFL-KELDKMYKEGMPQNDLMERA 318 (476)
Q Consensus 240 ~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~-keL~k~~~~~d~e~d~~e~~ 318 (476)
.|| +.--+...++.+.+..+ -+.++|-..+.-+.|.|+..|+.+.-- ..+..+... .++.+..
T Consensus 206 ---Thp-l~~l~~~pEf~~~Y~~t--------vi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eE----ed~nq~~ 269 (493)
T KOG2562|consen 206 ---THP-LEFLDEEPEFQERYAET--------VIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEE----EDINQVT 269 (493)
T ss_pred ---cCC-chhhccChhHHHHHHHH--------HhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHH----hhhhhhh
Confidence 455 44445566666666654 248899999999999999999976432 111111111 1111000
Q ss_pred H-HHHHHHHH---HHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHH----hcc
Q psy10339 319 E-EMERMREH---VFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFK----EAD 390 (476)
Q Consensus 319 ~-~~~e~re~---~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~----EvD 390 (476)
. ...+.-.. -|-..|+| .||.|+.++|...-.. +. ..++++.||. ..=
T Consensus 270 ~~FS~e~f~viy~kFweLD~D-----hd~lidk~~L~ry~d~-----------------tl--t~~ivdRIFs~v~r~~~ 325 (493)
T KOG2562|consen 270 RYFSYEHFYVIYCKFWELDTD-----HDGLIDKEDLKRYGDH-----------------TL--TERIVDRIFSQVPRGFT 325 (493)
T ss_pred hheeHHHHHHHHHHHhhhccc-----cccccCHHHHHHHhcc-----------------ch--hhHHHHHHHhhccccce
Confidence 0 00000011 25667999 9999999999864211 00 1235677887 445
Q ss_pred CCCCCcccHHHHHHHHhcccCCCCC----CCc---ccCCCCCCCHHHHHHHHH
Q psy10339 391 VNRDRLISWEEFLEMTRRQEFNQDP----GWK---PIDQEQVYSQAEVEAYER 436 (476)
Q Consensus 391 ~DgDG~ISfeEFl~~m~~~~~~~~~----~w~---~~d~~g~is~~EL~~~~~ 436 (476)
.-.+|.++|++|+.++.+.++...+ =|- +++++|++|..||+-|-+
T Consensus 326 ~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G~Lt~~el~~fye 378 (493)
T KOG2562|consen 326 VKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDGILTLNELRYFYE 378 (493)
T ss_pred eeecCcccHHHHHHHHHHhccCCCccchhhheeeeeccCCCcccHHHHHHHHH
Confidence 5679999999999999887664332 233 448999999999998764
No 66
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=97.27 E-value=0.00097 Score=56.39 Aligned_cols=66 Identities=18% Similarity=0.248 Sum_probs=50.4
Q ss_pred HHhhhhhccC-CC-CCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHH
Q psy10339 273 PKAFFAMHDL-DG-NHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350 (476)
Q Consensus 273 pk~~F~l~D~-Dg-DG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL 350 (476)
+-.+|..||. || +|+|+.+||..++.+++. ++...+..++ .++|+.+|.| ++|.|+.+||
T Consensus 12 ~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~--lg~k~t~~ev-----------~~m~~~~D~d-----~dG~Idf~EF 73 (88)
T cd05029 12 LVAIFHKYSGREGDKNTLSKKELKELIQKELT--IGSKLQDAEI-----------AKLMEDLDRN-----KDQEVNFQEY 73 (88)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHHHh--cCCCCCHHHH-----------HHHHHHhcCC-----CCCCCcHHHH
Confidence 4788999999 78 999999999998854321 2222233333 3689999999 9999999999
Q ss_pred HHHHHH
Q psy10339 351 KMLFLK 356 (476)
Q Consensus 351 ~~~~~~ 356 (476)
..++..
T Consensus 74 v~lm~~ 79 (88)
T cd05029 74 VTFLGA 79 (88)
T ss_pred HHHHHH
Confidence 988765
No 67
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.22 E-value=0.00024 Score=46.82 Aligned_cols=25 Identities=32% Similarity=0.319 Sum_probs=22.0
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLF 297 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm 297 (476)
++.+|..+|+|+||.||++||.+++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 3678999999999999999998753
No 68
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.21 E-value=0.00034 Score=52.71 Aligned_cols=46 Identities=13% Similarity=0.184 Sum_probs=39.8
Q ss_pred CHHHHHHHHHhcCCCC-CCCCCHHhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 252 SKKQLEEVWQEQDHMG-NTEFNPKAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 252 s~~qL~ev~~~~~Gl~-~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
+.++|..++.. .|.+ .+.-++..+|..+|.|+||+|+++||..+|.
T Consensus 6 ~~~~~~~~l~~-~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 6 TREEFRRALSK-LGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp EHHHHHHHHHH-TTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CHHHHHHHHHH-hCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 56889998854 4877 7777789999999999999999999998874
No 69
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.05 E-value=0.0042 Score=65.97 Aligned_cols=60 Identities=22% Similarity=0.232 Sum_probs=48.7
Q ss_pred cCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCC
Q psy10339 263 QDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGN 342 (476)
Q Consensus 263 ~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GD 342 (476)
..|...-.-.+..+|+.+|.||||.|+.+||.. ...+|..+|.| ||
T Consensus 326 ~~~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~-----------------------------~~~~F~~~D~d-----~D 371 (391)
T PRK12309 326 LEGGEAFTHAAQEIFRLYDLDGDGFITREEWLG-----------------------------SDAVFDALDLN-----HD 371 (391)
T ss_pred hhccChhhHHHHHHHHHhCCCCCCcCcHHHHHH-----------------------------HHHHHHHhCCC-----CC
Confidence 345444445579999999999999999999842 02589999999 99
Q ss_pred ccccHHHHHHHHHH
Q psy10339 343 HVWDEEEVKMLFLK 356 (476)
Q Consensus 343 G~IS~eEL~~~~~~ 356 (476)
|.||.+||..++..
T Consensus 372 G~Is~eEf~~~~~~ 385 (391)
T PRK12309 372 GKITPEEMRAGLGA 385 (391)
T ss_pred CCCcHHHHHHHHHH
Confidence 99999999998764
No 70
>KOG4065|consensus
Probab=97.05 E-value=0.0016 Score=58.51 Aligned_cols=72 Identities=26% Similarity=0.387 Sum_probs=53.0
Q ss_pred HHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcc-hhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHH
Q psy10339 326 EHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQN-DLMERAEEMERMREHVFKEADVNRDRLISWEEFLE 404 (476)
Q Consensus 326 e~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~-e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~ 404 (476)
-..|++.|.| +||+|+-=||..+++-.-..- ..+.+. .. -+..|+.+|++.+++.-|.|+||.|+|-||++
T Consensus 70 fHYF~MHDld-----knn~lDGiEl~kAiTH~H~~h--~~ghep~Pl-~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 70 FHYFSMHDLD-----KNNFLDGIELLKAITHTHDAH--DSGHEPVPL-SSEAELERLIDAVLDDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred hhhhhhhccC-----cCCcchHHHHHHHHHHHhhhh--hcCCCCCCC-CCHHHHHHHHHHHhcccccCCCceeeHHHHHh
Confidence 3579999999 999999999998876432210 111110 11 13357888999999999999999999999986
Q ss_pred H
Q psy10339 405 M 405 (476)
Q Consensus 405 ~ 405 (476)
.
T Consensus 142 ~ 142 (144)
T KOG4065|consen 142 R 142 (144)
T ss_pred h
Confidence 4
No 71
>KOG2643|consensus
Probab=97.04 E-value=0.0071 Score=64.61 Aligned_cols=121 Identities=20% Similarity=0.235 Sum_probs=76.1
Q ss_pred CCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHHH---HHHHHh------ccCCCh-----------------------h
Q psy10339 265 HMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLK---ELDKMY------KEGMPQ-----------------------N 312 (476)
Q Consensus 265 Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~k---eL~k~~------~~~d~e-----------------------~ 312 (476)
..+...| .-+|++||+||||-|+.+||..+++- +..-.. ..+..- +
T Consensus 229 S~p~~~F--~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~d 306 (489)
T KOG2643|consen 229 SIPERNF--RIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSID 306 (489)
T ss_pred ccCcccc--eeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHH
Confidence 3345556 77899999999999999999877641 110000 000000 0
Q ss_pred hHhHHH-HHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccC
Q psy10339 313 DLMERA-EEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADV 391 (476)
Q Consensus 313 d~~e~~-~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~ 391 (476)
+|.++. ..+.++.+-=|..||.. .+|.||..++..++..--+ . + .+....++..+-+.++.
T Consensus 307 eF~~F~e~Lq~Eil~lEF~~~~~~-----~~g~Ise~DFA~~lL~~a~-----~--n------~~~k~~~lkrvk~kf~~ 368 (489)
T KOG2643|consen 307 EFLKFQENLQEEILELEFERFDKG-----DSGAISEVDFAELLLAYAG-----V--N------SKKKHKYLKRVKEKFKD 368 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcc-----cccccCHHHHHHHHHHHcc-----c--c------hHhHHHHHHHHHHhccC
Confidence 122222 23556666679999999 8899999999888753110 0 0 12233456678888888
Q ss_pred CCCCcccHHHHHHHH
Q psy10339 392 NRDRLISWEEFLEMT 406 (476)
Q Consensus 392 DgDG~ISfeEFl~~m 406 (476)
+ +-.||++||..+.
T Consensus 369 ~-~~gISl~Ef~~Ff 382 (489)
T KOG2643|consen 369 D-GKGISLQEFKAFF 382 (489)
T ss_pred C-CCCcCHHHHHHHH
Confidence 7 5569999998753
No 72
>KOG0040|consensus
Probab=96.98 E-value=0.065 Score=64.30 Aligned_cols=108 Identities=18% Similarity=0.242 Sum_probs=76.3
Q ss_pred HHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy10339 326 EHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405 (476)
Q Consensus 326 e~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~ 405 (476)
.-+|+.||++ .+|.++-++|+.++++.|..+ .+.+.+ +...++ +.+|.-+|.|.||.||..+|+.+
T Consensus 2256 s~~fkhFDke-----k~G~Ldhq~F~sCLrslgY~l---pmvEe~--~~~p~f----e~~ld~vDP~r~G~Vsl~dY~af 2321 (2399)
T KOG0040|consen 2256 SMMFKHFDKE-----KNGRLDHQHFKSCLRSLGYDL---PMVEEG--EPEPEF----EEILDLVDPNRDGYVSLQDYMAF 2321 (2399)
T ss_pred HHHHHHhchh-----hccCCcHHHHHHHHHhcCCCC---cccccC--CCChhH----HHHHHhcCCCCcCcccHHHHHHH
Confidence 3689999999 999999999999999876433 111110 011123 46899999999999999999999
Q ss_pred HhcccCCC---C----CCCcccC-CCCCCCHHHHHHHHHHHH-HHHHHHHH
Q psy10339 406 TRRQEFNQ---D----PGWKPID-QEQVYSQAEVEAYERQRQ-AEVDRLVR 447 (476)
Q Consensus 406 m~~~~~~~---~----~~w~~~d-~~g~is~~EL~~~~~~l~-eE~~~mi~ 447 (476)
|-+.+... + ++|+.++ +.++++.+++..-+.+-+ +=|-.-|+
T Consensus 2322 mi~~ETeNI~s~~eIE~AfraL~a~~~yvtke~~~~~ltreqaefc~s~m~ 2372 (2399)
T KOG0040|consen 2322 MISKETENILSSEEIEDAFRALDAGKPYVTKEELYQNLTREQAEFCMSKMK 2372 (2399)
T ss_pred HHhcccccccchHHHHHHHHHhhcCCccccHHHHHhcCCHHHHHHHHHHhh
Confidence 98876422 1 4677554 678899999877665443 33444333
No 73
>PF14658 EF-hand_9: EF-hand domain
Probab=96.91 E-value=0.0015 Score=53.10 Aligned_cols=62 Identities=13% Similarity=0.224 Sum_probs=49.4
Q ss_pred HHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCC-CcccHHHHHHH
Q psy10339 327 HVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRD-RLISWEEFLEM 405 (476)
Q Consensus 327 ~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgD-G~ISfeEFl~~ 405 (476)
.+|..||++ +.|.|....|..+++..+.. ... ..++ +.+.+++|.+|. |.|+|+.|+..
T Consensus 2 ~~F~~fD~~-----~tG~V~v~~l~~~Lra~~~~----~p~-------e~~L----q~l~~elDP~g~~~~v~~d~F~~i 61 (66)
T PF14658_consen 2 TAFDAFDTQ-----KTGRVPVSDLITYLRAVTGR----SPE-------ESEL----QDLINELDPEGRDGSVNFDTFLAI 61 (66)
T ss_pred cchhhcCCc-----CCceEeHHHHHHHHHHHcCC----CCc-------HHHH----HHHHHHhCCCCCCceEeHHHHHHH
Confidence 479999999 99999999999999874431 111 1233 468999999998 99999999999
Q ss_pred Hhc
Q psy10339 406 TRR 408 (476)
Q Consensus 406 m~~ 408 (476)
|+.
T Consensus 62 M~~ 64 (66)
T PF14658_consen 62 MRD 64 (66)
T ss_pred HHH
Confidence 874
No 74
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.89 E-value=0.00075 Score=45.96 Aligned_cols=26 Identities=31% Similarity=0.466 Sum_probs=22.8
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
++.+|+.+|.|+||+|+.+||..++.
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 47899999999999999999998874
No 75
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=96.73 E-value=0.0077 Score=50.62 Aligned_cols=68 Identities=24% Similarity=0.267 Sum_probs=49.6
Q ss_pred HHhhhhhccCC--CCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHH
Q psy10339 273 PKAFFAMHDLD--GNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350 (476)
Q Consensus 273 pk~~F~l~D~D--gDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL 350 (476)
+-..|..++.+ .+|+|+.+||..+|...+...+....... .+..+|+.+|.| ++|.|+.+||
T Consensus 10 ~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~-----------~v~~i~~~~D~d-----~dG~I~f~eF 73 (88)
T cd05030 10 IINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQK-----------AIDKIFEDLDTN-----QDGQLSFEEF 73 (88)
T ss_pred HHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHH-----------HHHHHHHHcCCC-----CCCcCcHHHH
Confidence 46789999876 48999999999998644322121111122 345799999999 9999999999
Q ss_pred HHHHHH
Q psy10339 351 KMLFLK 356 (476)
Q Consensus 351 ~~~~~~ 356 (476)
..++..
T Consensus 74 ~~~~~~ 79 (88)
T cd05030 74 LVLVIK 79 (88)
T ss_pred HHHHHH
Confidence 988765
No 76
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.45 E-value=0.0011 Score=58.13 Aligned_cols=69 Identities=16% Similarity=0.207 Sum_probs=54.4
Q ss_pred hcCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHH
Q psy10339 217 SLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKML 296 (476)
Q Consensus 217 ~~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~al 296 (476)
=+++++|+..|...|...+ .++|.+ +-++...++..+ |++.+. +..++.+.|.|+||++|+.||..+
T Consensus 2 ~~ls~~e~~~y~~~F~~l~-~~~g~i---------sg~~a~~~f~~S-~L~~~~--L~~IW~LaD~~~dG~L~~~EF~iA 68 (104)
T PF12763_consen 2 PKLSPEEKQKYDQIFQSLD-PQDGKI---------SGDQAREFFMKS-GLPRDV--LAQIWNLADIDNDGKLDFEEFAIA 68 (104)
T ss_dssp ---SCCHHHHHHHHHHCTS-SSTTEE---------EHHHHHHHHHHT-TSSHHH--HHHHHHHH-SSSSSEEEHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcC-CCCCeE---------eHHHHHHHHHHc-CCCHHH--HHHHHhhhcCCCCCcCCHHHHHHH
Confidence 3578899999999998765 345555 668888999987 877644 499999999999999999999988
Q ss_pred HH
Q psy10339 297 FL 298 (476)
Q Consensus 297 m~ 298 (476)
|.
T Consensus 69 m~ 70 (104)
T PF12763_consen 69 MH 70 (104)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 77
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.39 E-value=0.0035 Score=42.65 Aligned_cols=25 Identities=28% Similarity=0.429 Sum_probs=22.3
Q ss_pred HHHHHHhccCCCCCCCCccccHHHHHHHHH
Q psy10339 326 EHVFKEADVNRDHLDGNHVWDEEEVKMLFL 355 (476)
Q Consensus 326 e~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~ 355 (476)
+.+|+.||.| +||+||.+||..+++
T Consensus 3 ~~~F~~~D~d-----~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 3 REAFKMFDKD-----GDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHH-TT-----SSSEEEHHHHHHHHH
T ss_pred HHHHHHHCCC-----CCCcCcHHHHHHHHH
Confidence 4799999999 999999999999886
No 78
>KOG2643|consensus
Probab=96.36 E-value=0.007 Score=64.65 Aligned_cols=134 Identities=13% Similarity=0.128 Sum_probs=80.9
Q ss_pred hhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHH-
Q psy10339 277 FAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFL- 355 (476)
Q Consensus 277 F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~- 355 (476)
+--+|.+.+|-||+.|+.-++.- +. .+...+. -+|++||.| |||.|+.+||..+++
T Consensus 205 siF~~lg~~GLIsfSdYiFLlTl-----LS--~p~~~F~-----------IAFKMFD~d-----gnG~IdkeEF~~v~~l 261 (489)
T KOG2643|consen 205 SIFYKLGESGLISFSDYIFLLTL-----LS--IPERNFR-----------IAFKMFDLD-----GNGEIDKEEFETVQQL 261 (489)
T ss_pred eeEEEcCCCCeeeHHHHHHHHHH-----Hc--cCcccce-----------eeeeeeecC-----CCCcccHHHHHHHHHH
Confidence 44567888999999999866531 11 1222333 489999999 999999999998863
Q ss_pred --HHHHH-h--hhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhcccCCC-CCCCccc--CCCCCCC
Q psy10339 356 --KELDK-M--YKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQ-DPGWKPI--DQEQVYS 427 (476)
Q Consensus 356 --~el~k-l--~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~~~~~-~~~w~~~--d~~g~is 427 (476)
++..- + .+...+.+- ..-++.. .-..--+-.+|+|.++++||++++..-...- .-.|.-+ ...|.||
T Consensus 262 i~sQ~~~g~~hrd~~tt~~s---~~~~~ns--aL~~yFFG~rg~~kLs~deF~~F~e~Lq~Eil~lEF~~~~~~~~g~Is 336 (489)
T KOG2643|consen 262 IRSQTSVGVRHRDHFTTGNS---FKVEVNS--ALLTYFFGKRGNGKLSIDEFLKFQENLQEEILELEFERFDKGDSGAIS 336 (489)
T ss_pred HHhccccceecccCccccce---ehhhhhh--hHHHHhhccCCCccccHHHHHHHHHHHHHHHHHHHHHHhCcccccccC
Confidence 11000 0 000000000 0001111 0134568899999999999999987632110 1133333 2459999
Q ss_pred HHHHHHHHHHH
Q psy10339 428 QAEVEAYERQR 438 (476)
Q Consensus 428 ~~EL~~~~~~l 438 (476)
+...+.++=..
T Consensus 337 e~DFA~~lL~~ 347 (489)
T KOG2643|consen 337 EVDFAELLLAY 347 (489)
T ss_pred HHHHHHHHHHH
Confidence 99999988443
No 79
>KOG0041|consensus
Probab=95.83 E-value=0.018 Score=56.40 Aligned_cols=69 Identities=13% Similarity=0.071 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 220 TDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 220 ~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
+..|.+-+...|++++..++|.| +..+|+-++++. |+..+..-++.+.+.+|-|.||+||+-||.-+++
T Consensus 94 srkqIk~~~~~Fk~yDe~rDgfI---------dl~ELK~mmEKL-gapQTHL~lK~mikeVded~dgklSfreflLIfr 162 (244)
T KOG0041|consen 94 SRKQIKDAESMFKQYDEDRDGFI---------DLMELKRMMEKL-GAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFR 162 (244)
T ss_pred HHHHHHHHHHHHHHhcccccccc---------cHHHHHHHHHHh-CCchhhHHHHHHHHHhhcccccchhHHHHHHHHH
Confidence 33667778889999999999999 899999999986 9999999999999999999999999999987764
No 80
>KOG0038|consensus
Probab=95.79 E-value=0.061 Score=50.48 Aligned_cols=97 Identities=18% Similarity=0.356 Sum_probs=69.0
Q ss_pred HHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhH
Q psy10339 235 IRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDL 314 (476)
Q Consensus 235 ~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~ 314 (476)
-+.++|++ |.+.+-+++.-.-.+-|-+.-++-+|+.+|-|+|++|-..++..++.+- -.....+.+.
T Consensus 81 SeDG~Gnl---------sfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~l----Tr~eLs~eEv 147 (189)
T KOG0038|consen 81 SEDGRGNL---------SFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSL----TRDELSDEEV 147 (189)
T ss_pred ccCCCCcc---------cHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHH----hhccCCHHHH
Confidence 36788777 7777765554433345556666889999999999999999999887532 2222222221
Q ss_pred hHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHH
Q psy10339 315 MERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLK 356 (476)
Q Consensus 315 ~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~ 356 (476)
.-+.+.+...+|.| |||.++..|+..++.+
T Consensus 148 -------~~i~ekvieEAD~D-----gDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 148 -------ELICEKVIEEADLD-----GDGKLSFAEFEHVILR 177 (189)
T ss_pred -------HHHHHHHHHHhcCC-----CCCcccHHHHHHHHHh
Confidence 12455677888999 9999999999988654
No 81
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=95.79 E-value=0.0038 Score=55.28 Aligned_cols=58 Identities=33% Similarity=0.421 Sum_probs=37.5
Q ss_pred HHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHH
Q psy10339 324 MREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFL 403 (476)
Q Consensus 324 ~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl 403 (476)
...+.|..+|.| +||.++..||..+.... ... +. =+..+++..|.|+||.||+.||.
T Consensus 55 ~~~W~F~~LD~n-----~d~~L~~~El~~l~~~l--------~~~----e~------C~~~F~~~CD~n~d~~Is~~EW~ 111 (113)
T PF10591_consen 55 VVHWKFCQLDRN-----KDGVLDRSELKPLRRPL--------MPP----EH------CARPFFRSCDVNKDGKISLDEWC 111 (113)
T ss_dssp HHHHHHHHH--T------SSEE-TTTTGGGGSTT--------STT----GG------GHHHHHHHH-TT-SSSEEHHHHH
T ss_pred hhhhhHhhhcCC-----CCCccCHHHHHHHHHHH--------hhh----HH------HHHHHHHHcCCCCCCCCCHHHHc
Confidence 445789999999 99999999998764311 000 00 12358999999999999999996
Q ss_pred H
Q psy10339 404 E 404 (476)
Q Consensus 404 ~ 404 (476)
.
T Consensus 112 ~ 112 (113)
T PF10591_consen 112 N 112 (113)
T ss_dssp H
T ss_pred c
Confidence 3
No 82
>KOG4666|consensus
Probab=95.75 E-value=0.017 Score=59.95 Aligned_cols=100 Identities=14% Similarity=0.126 Sum_probs=70.2
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKM 352 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~ 352 (476)
+..+|.+||.+++|.+|+-|....+. -+-++.... ...+-+|++|+.+ -||++...+|.-
T Consensus 261 l~~~f~LFde~~tg~~D~re~v~~la----vlc~p~~t~-----------~iiq~afk~f~v~-----eDg~~ge~~ls~ 320 (412)
T KOG4666|consen 261 LAPTFMLFDEGTTGNGDYRETVKTLA----VLCGPPVTP-----------VIIQYAFKRFSVA-----EDGISGEHILSL 320 (412)
T ss_pred hhhhhheecCCCCCcccHHHHhhhhe----eeeCCCCcH-----------HHHHHHHHhcccc-----cccccchHHHHH
Confidence 37789999999999999988754331 011222111 2345799999999 888888888877
Q ss_pred HHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHHhcc
Q psy10339 353 LFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409 (476)
Q Consensus 353 ~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m~~~ 409 (476)
+++..++- +++. +-.+|..++.-.||+|+|++|..++..-
T Consensus 321 ilq~~lgv---------------~~l~--v~~lf~~i~q~d~~ki~~~~f~~fa~~~ 360 (412)
T KOG4666|consen 321 ILQVVLGV---------------EVLR--VPVLFPSIEQKDDPKIYASNFRKFAATE 360 (412)
T ss_pred HHHHhcCc---------------ceee--ccccchhhhcccCcceeHHHHHHHHHhC
Confidence 76543220 0110 1347999999999999999999998764
No 83
>KOG4251|consensus
Probab=95.74 E-value=0.013 Score=58.79 Aligned_cols=111 Identities=20% Similarity=0.220 Sum_probs=68.7
Q ss_pred HhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHH
Q psy10339 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKML 353 (476)
Q Consensus 274 k~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~ 353 (476)
..+|+..|+|.||+||..|+..-+.......++. ..+--+..|+..|.| |||.|+-+|++--
T Consensus 104 mviFsKvDVNtDrkisAkEmqrwImektaEHfqe-------------ameeSkthFraVDpd-----gDGhvsWdEykvk 165 (362)
T KOG4251|consen 104 MVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQE-------------AMEESKTHFRAVDPD-----GDGHVSWDEYKVK 165 (362)
T ss_pred HHHHhhcccCccccccHHHHHHHHHHHHHHHHHH-------------HHhhhhhheeeeCCC-----CCCceehhhhhhH
Confidence 6789999999999999999976553322211111 112234689999999 9999999999987
Q ss_pred HHHHHHHhhhcC----CCcchhhhhHHHHHHHHHHHHHhccCCCCCcccH---------HHHHHHHhc
Q psy10339 354 FLKELDKMYKEG----MPQNDLMERAEEMERMREHVFKEADVNRDRLISW---------EEFLEMTRR 408 (476)
Q Consensus 354 ~~~el~kl~~e~----~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISf---------eEFl~~m~~ 408 (476)
|.+.-++--++. ..+++.. ..++ ..++.+-+++.+|+.+- +||.-++..
T Consensus 166 Flaskghsekevadairlneelk-VDeE-----tqevlenlkdRwyqaDsppadlllteeEflsFLHP 227 (362)
T KOG4251|consen 166 FLASKGHSEKEVADAIRLNEELK-VDEE-----TQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHP 227 (362)
T ss_pred HHhhcCcchHHHHHHhhccCccc-ccHH-----HHHHHHhhhhhhccccCchhhhhhhHHHHHHHcCh
Confidence 754322110000 0010000 0011 13577788888888776 898876543
No 84
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=95.57 E-value=0.037 Score=48.54 Aligned_cols=58 Identities=19% Similarity=0.463 Sum_probs=42.5
Q ss_pred HHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy10339 326 EHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405 (476)
Q Consensus 326 e~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~ 405 (476)
..+|...| . ++|+|+.+..+.+|.+.+ .+ .+.+ ..|...+|.|+||.++++||+-.
T Consensus 13 ~~~F~~l~-~-----~~g~isg~~a~~~f~~S~-------L~-------~~~L----~~IW~LaD~~~dG~L~~~EF~iA 68 (104)
T PF12763_consen 13 DQIFQSLD-P-----QDGKISGDQAREFFMKSG-------LP-------RDVL----AQIWNLADIDNDGKLDFEEFAIA 68 (104)
T ss_dssp HHHHHCTS-S-----STTEEEHHHHHHHHHHTT-------SS-------HHHH----HHHHHHH-SSSSSEEEHHHHHHH
T ss_pred HHHHHhcC-C-----CCCeEeHHHHHHHHHHcC-------CC-------HHHH----HHHHhhhcCCCCCcCCHHHHHHH
Confidence 35777766 4 679999999999887521 11 1233 46789999999999999999876
Q ss_pred Hh
Q psy10339 406 TR 407 (476)
Q Consensus 406 m~ 407 (476)
|.
T Consensus 69 m~ 70 (104)
T PF12763_consen 69 MH 70 (104)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 85
>KOG0040|consensus
Probab=95.39 E-value=2.8 Score=51.33 Aligned_cols=234 Identities=14% Similarity=0.254 Sum_probs=139.7
Q ss_pred hhhHHHHHHHHHHHHHHhhChHHHHHHhhcChHHhhhhhhHHHhhhhchhhhhhhhHHHH-----HHHHHHHHHHHHHHH
Q psy10339 78 ELGIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKR-----TELDRLRELAKRQYE 152 (476)
Q Consensus 78 ~~~~~Y~rYl~evi~~Le~dp~frekl~~a~~~di~~gk~~~~l~~v~~~vr~~ldelkr-----~e~~rlr~l~~~~~~ 152 (476)
-+.-.|+.++.+|-.-|+ +.-||+|-..|+.+ +.+.++.+- +.|+.+|.++...+=
T Consensus 2144 ~~a~tfh~wi~etr~el~---------------~~~sgtLE~Qleal----~~k~~evqa~rg~l~~ie~~g~lmE~~lI 2204 (2399)
T KOG0040|consen 2144 CTANTFHQWIVETRKELE---------------DGESGTLEDQLEAL----KRKIKEVQAMRGQLQKIEKLGALMESRLI 2204 (2399)
T ss_pred HHHHHHHHHHHHHHHHHH---------------hhccCcHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Confidence 344456666666655433 23677777776653 333333332 456666666655554
Q ss_pred HhcCCCCCCCCCCCCCCCCCcc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCHHHHHHHHHH
Q psy10339 153 LSEGKAVPDAPGHVDHNNPHSF--EINDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKK 230 (476)
Q Consensus 153 ~~~~~~~~~~~~h~d~~n~~~f--~~~dl~~li~~~~~dl~~~d~~r~~~fk~yem~k~~e~~~~~~~l~eeer~e~~~~ 230 (476)
..+ +-.+| .||.. +.+.|..|.-....-|++-...| --..-|+++-++|.=+
T Consensus 2205 ldn-----kyt~~----st~GlaqqwdQl~qL~~rMqhnlEQqIqar-----------------n~~GVtEe~L~EFs~~ 2258 (2399)
T KOG0040|consen 2205 LDN-----KYTEH----STVGLAQQWDQLDQLMMRMQHNLEQQIQAR-----------------NHNGVTEEQLKEFSMM 2258 (2399)
T ss_pred hcc-----ccccc----CchHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------------ccCCCCHHHHHHHHHH
Confidence 321 11122 22211 33445555555555555544443 2356888888999989
Q ss_pred HHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCC----C-C--CCHHhhhhhccCCCCCcccHHHHHHHHHH-HHH
Q psy10339 231 EAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGN----T-E--FNPKAFFAMHDLDGNHVWDEEEVKMLFLK-ELD 302 (476)
Q Consensus 231 ~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~----~-~--f~pk~~F~l~D~DgDG~Id~eEf~alm~k-eL~ 302 (476)
|+-+++++.|.+ +-.+++.|++.. |.+- + + -..+.+..++|.|.+|+|+..+|.+.|.+ |..
T Consensus 2259 fkhFDkek~G~L---------dhq~F~sCLrsl-gY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETe 2328 (2399)
T KOG0040|consen 2259 FKHFDKEKNGRL---------DHQHFKSCLRSL-GYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETE 2328 (2399)
T ss_pred HHHhchhhccCC---------cHHHHHHHHHhc-CCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhcccc
Confidence 999999999888 447899999986 5322 1 1 12388999999999999999999998842 211
Q ss_pred HHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHH
Q psy10339 303 KMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMR 382 (476)
Q Consensus 303 k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~ 382 (476)
....... .+.+|+..|.. ..||+..++...|++ ++..-.+
T Consensus 2329 ----NI~s~~e-----------IE~AfraL~a~------~~yvtke~~~~~ltr-------------------eqaefc~ 2368 (2399)
T KOG0040|consen 2329 ----NILSSEE-----------IEDAFRALDAG------KPYVTKEELYQNLTR-------------------EQAEFCM 2368 (2399)
T ss_pred ----cccchHH-----------HHHHHHHhhcC------CccccHHHHHhcCCH-------------------HHHHHHH
Confidence 1111112 23688888764 568888888765543 1222223
Q ss_pred HHHHHhccCC----CCCcccHHHHHHHH
Q psy10339 383 EHVFKEADVN----RDRLISWEEFLEMT 406 (476)
Q Consensus 383 e~mi~EvD~D----gDG~ISfeEFl~~m 406 (476)
.+|-.-+|+- --+.+.|.+|+...
T Consensus 2369 s~m~~~~e~~~~~s~q~~l~y~dfv~sl 2396 (2399)
T KOG0040|consen 2369 SKMKPYAETSSGRSDQVALDYKDFVNSL 2396 (2399)
T ss_pred HHhhhhcccccCCCccccccHHHHHHHH
Confidence 3444555553 33568888888653
No 86
>KOG0377|consensus
Probab=95.29 E-value=0.043 Score=59.00 Aligned_cols=68 Identities=15% Similarity=0.232 Sum_probs=49.2
Q ss_pred CCHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHH
Q psy10339 271 FNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350 (476)
Q Consensus 271 f~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL 350 (476)
-++.++|..+|+|++|.|+.+||.++..- +...+...-.+..+. .+-+..|-| +||.|+..||
T Consensus 547 s~LetiF~~iD~D~SG~isldEF~~a~~l-~~sh~~~~i~~~~i~-----------~la~~mD~N-----kDG~IDlNEf 609 (631)
T KOG0377|consen 547 SSLETIFNIIDADNSGEISLDEFRTAWKL-LSSHMNGAISDDEIL-----------ELARSMDLN-----KDGKIDLNEF 609 (631)
T ss_pred hhHHHHHHHhccCCCCceeHHHHHHHHHH-HHhhcCCCcCHHHHH-----------HHHHhhccC-----CCCcccHHHH
Confidence 45689999999999999999999987742 122222222222222 355678999 9999999999
Q ss_pred HHHHH
Q psy10339 351 KMLFL 355 (476)
Q Consensus 351 ~~~~~ 355 (476)
..+|.
T Consensus 610 LeAFr 614 (631)
T KOG0377|consen 610 LEAFR 614 (631)
T ss_pred HHHHh
Confidence 99885
No 87
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.14 E-value=0.026 Score=34.91 Aligned_cols=25 Identities=28% Similarity=0.500 Sum_probs=22.5
Q ss_pred HHHHhccCCCCCcccHHHHHHHHhc
Q psy10339 384 HVFKEADVNRDRLISWEEFLEMTRR 408 (476)
Q Consensus 384 ~mi~EvD~DgDG~ISfeEFl~~m~~ 408 (476)
.+|+.+|.|++|.|++.+|..+++.
T Consensus 4 ~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 4 EAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 4799999999999999999998764
No 88
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=95.10 E-value=0.12 Score=44.61 Aligned_cols=66 Identities=12% Similarity=0.119 Sum_probs=51.2
Q ss_pred HhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHH
Q psy10339 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKML 353 (476)
Q Consensus 274 k~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~ 353 (476)
-.+|..+-. +.|+++..||..++.+|+...+........+ ..+|+..|.| +||.|+.+|+..+
T Consensus 11 I~~FhkYaG-~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~v-----------d~im~~LD~n-----~Dg~vdF~EF~~L 73 (91)
T cd05024 11 MLTFHKFAG-EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAV-----------DKIMKDLDDC-----RDGKVGFQSFFSL 73 (91)
T ss_pred HHHHHHHcC-CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHH-----------HHHHHHhCCC-----CCCcCcHHHHHHH
Confidence 456666663 3569999999999999987666654333333 4789999999 9999999999988
Q ss_pred HHH
Q psy10339 354 FLK 356 (476)
Q Consensus 354 ~~~ 356 (476)
+..
T Consensus 74 v~~ 76 (91)
T cd05024 74 IAG 76 (91)
T ss_pred HHH
Confidence 755
No 89
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.10 E-value=0.025 Score=34.95 Aligned_cols=26 Identities=38% Similarity=0.400 Sum_probs=23.2
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
++.+|+.+|.|++|.|++.+|..++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 47899999999999999999988763
No 90
>PF14658 EF-hand_9: EF-hand domain
Probab=95.06 E-value=0.067 Score=43.58 Aligned_cols=62 Identities=10% Similarity=0.116 Sum_probs=46.9
Q ss_pred hhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCC-ccccHHHHHHH
Q psy10339 275 AFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGN-HVWDEEEVKML 353 (476)
Q Consensus 275 ~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GD-G~IS~eEL~~~ 353 (476)
.+|.+||+++.|.|....+..+|+. +-..+..+.++ +.+.+.+|.+ |. |.|+.+.+..+
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra----~~~~~p~e~~L-----------q~l~~elDP~-----g~~~~v~~d~F~~i 61 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRA----VTGRSPEESEL-----------QDLINELDPE-----GRDGSVNFDTFLAI 61 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHH----HcCCCCcHHHH-----------HHHHHHhCCC-----CCCceEeHHHHHHH
Confidence 4799999999999999999988742 22223333333 3677888999 65 99999999998
Q ss_pred HHH
Q psy10339 354 FLK 356 (476)
Q Consensus 354 ~~~ 356 (476)
|+.
T Consensus 62 M~~ 64 (66)
T PF14658_consen 62 MRD 64 (66)
T ss_pred HHH
Confidence 853
No 91
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=94.50 E-value=0.027 Score=49.91 Aligned_cols=57 Identities=25% Similarity=0.234 Sum_probs=36.3
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKM 352 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~ 352 (476)
+.=.|..+|.|+||.|+..|+..+. ....+.. ...+.+|+..|.| +||.||..|+..
T Consensus 56 ~~W~F~~LD~n~d~~L~~~El~~l~--------~~l~~~e----------~C~~~F~~~CD~n-----~d~~Is~~EW~~ 112 (113)
T PF10591_consen 56 VHWKFCQLDRNKDGVLDRSELKPLR--------RPLMPPE----------HCARPFFRSCDVN-----KDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHH--T-SSEE-TTTTGGGG--------STTSTTG----------GGHHHHHHHH-TT------SSSEEHHHHHH
T ss_pred hhhhHhhhcCCCCCccCHHHHHHHH--------HHHhhhH----------HHHHHHHHHcCCC-----CCCCCCHHHHcc
Confidence 4566999999999999999987532 1111111 1234689999999 999999999975
No 92
>KOG2562|consensus
Probab=93.82 E-value=1.2 Score=48.55 Aligned_cols=68 Identities=13% Similarity=0.187 Sum_probs=46.5
Q ss_pred HHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy10339 326 EHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405 (476)
Q Consensus 326 e~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~ 405 (476)
+-.|+..|.+ |+|.|+..||+.++..+...+-. .+.+. ...+.+ +..|+..+-.-..|+|++.+|++.
T Consensus 354 eYwFrclDld-----~~G~Lt~~el~~fyeeq~~rm~~-~~~e~---l~fed~---l~qi~DMvkP~~~~kItLqDlk~s 421 (493)
T KOG2562|consen 354 EYWFRCLDLD-----GDGILTLNELRYFYEEQLQRMEC-MGQEA---LPFEDA---LCQIRDMVKPEDENKITLQDLKGS 421 (493)
T ss_pred hhheeeeecc-----CCCcccHHHHHHHHHHHHHHHHh-cCCCc---ccHHHH---HHHHHHHhCccCCCceeHHHHhhc
Confidence 4579999999 99999999999998776654421 11111 112333 345566666666789999999973
No 93
>KOG0046|consensus
Probab=93.57 E-value=0.16 Score=55.62 Aligned_cols=94 Identities=17% Similarity=0.142 Sum_probs=63.5
Q ss_pred HHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy10339 326 EHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405 (476)
Q Consensus 326 e~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~ 405 (476)
+..|...| | ++|+|+..+|..+|.+..... +. ...++ +..++.+++.|.||.|+|+||+..
T Consensus 22 ~~kF~~~d-~-----~~G~v~~~~l~~~f~k~~~~~----g~-----~~~ee----i~~~l~~~~~~~~g~v~fe~f~~~ 82 (627)
T KOG0046|consen 22 KEKFNKLD-D-----QKGYVTVYELPDAFKKAKLPL----GY-----FVREE----IKEILGEVGVDADGRVEFEEFVGI 82 (627)
T ss_pred HHHHHhhc-C-----CCCeeehHHhHHHHHHhcccc----cc-----hhHHH----HHHHHhccCCCcCCccCHHHHHHH
Confidence 46788889 8 999999999999997632111 00 01123 457899999999999999999985
Q ss_pred HhcccCC----------CCCCCcccCCCC---CCCHHHHHHHHHHH
Q psy10339 406 TRRQEFN----------QDPGWKPIDQEQ---VYSQAEVEAYERQR 438 (476)
Q Consensus 406 m~~~~~~----------~~~~w~~~d~~g---~is~~EL~~~~~~l 438 (476)
+..-... ...++...-..| .|+++|=.+|...+
T Consensus 83 ~~~l~s~~~~k~~~g~~~~~~~~~~sst~~~Hti~eeEk~~fv~hI 128 (627)
T KOG0046|consen 83 FLNLKSKDIAKIGEGIKAASGTLKGSSTGTQHTINEEEKRAFVNHI 128 (627)
T ss_pred HHhhhhhhhhhhcCCcccccceeecccccceeeecHHHHHHHHHHH
Confidence 5432110 012333333333 58999999998665
No 94
>KOG1029|consensus
Probab=91.73 E-value=1 Score=51.70 Aligned_cols=67 Identities=16% Similarity=0.227 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 219 MTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 219 l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
.|.++|.++-+.|..++- ..|-+ +-+|-+.++-.+ |+..-.+ ..++.+-|.|+||.++..||.-+|+
T Consensus 10 vT~~Er~K~~~qF~~Lkp-~~gfi---------tg~qArnfflqS-~LP~~VL--aqIWALsDldkDGrmdi~EfSIAmk 76 (1118)
T KOG1029|consen 10 VTDEERQKHDAQFGQLKP-GQGFI---------TGDQARNFFLQS-GLPTPVL--AQIWALSDLDKDGRMDIREFSIAMK 76 (1118)
T ss_pred cchHHHHHHHHHHhccCC-CCCcc---------chHhhhhhHHhc-CCChHHH--HHHHHhhhcCccccchHHHHHHHHH
Confidence 577888888887776521 22222 336666655554 7765444 8899999999999999999988776
No 95
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=90.38 E-value=0.29 Score=38.10 Aligned_cols=46 Identities=13% Similarity=0.193 Sum_probs=32.8
Q ss_pred CHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 252 SKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 252 s~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
|..+++.+++.. ..+.++-.+..+|+..|++++|+++.+||...+.
T Consensus 3 sf~Evk~lLk~~-NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 3 SFKEVKKLLKMM-NIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp EHHHHHHHHHHT-T----HHHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred CHHHHHHHHHHH-ccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 345667777765 5556666689999999999999999999987663
No 96
>KOG4065|consensus
Probab=90.08 E-value=0.34 Score=43.97 Aligned_cols=71 Identities=30% Similarity=0.417 Sum_probs=44.8
Q ss_pred hhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHH
Q psy10339 275 AFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKM 352 (476)
Q Consensus 275 ~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~ 352 (476)
..|+++|.|+||.|+--|+..++..- ...-..+....-+. .......+...+.+--|.| |||+|+-.|+..
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~-H~~h~~ghep~Pl~-sE~Ele~~iD~vL~DdDfN-----~DG~IDYgEflK 141 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHT-HDAHDSGHEPVPLS-SEAELERLIDAVLDDDDFN-----GDGVIDYGEFLK 141 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHH-hhhhhcCCCCCCCC-CHHHHHHHHHHHhcccccC-----CCceeeHHHHHh
Confidence 35999999999999999998877521 11111111110000 0122345566677777888 999999988864
No 97
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=89.15 E-value=0.93 Score=35.30 Aligned_cols=26 Identities=31% Similarity=0.511 Sum_probs=22.1
Q ss_pred HHHHHhccCCCCCcccHHHHHHHHhc
Q psy10339 383 EHVFKEADVNRDRLISWEEFLEMTRR 408 (476)
Q Consensus 383 e~mi~EvD~DgDG~ISfeEFl~~m~~ 408 (476)
..+|+++|++++|.+..+||..+...
T Consensus 24 ~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 24 RQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp HHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred HHHHHHhcccCCCCccHHHHHHHHHH
Confidence 46899999999999999999988653
No 98
>KOG0751|consensus
Probab=86.19 E-value=3.6 Score=45.43 Aligned_cols=156 Identities=15% Similarity=0.112 Sum_probs=83.8
Q ss_pred HhhhhhccCCCCCcccHHHHHHHHHH-HHHHHhccCCChhh---------------HhHHH----HHHHHHHHHHHHHhc
Q psy10339 274 KAFFAMHDLDGNHVWDEEEVKMLFLK-ELDKMYKEGMPQND---------------LMERA----EEMERMREHVFKEAD 333 (476)
Q Consensus 274 k~~F~l~D~DgDG~Id~eEf~alm~k-eL~k~~~~~d~e~d---------------~~e~~----~~~~e~re~~Fk~fD 333 (476)
..+|.+||++++|.+|++++..++.. .+..-+ +-+.+.+ +.+++ ....+.-+++|+..|
T Consensus 111 ~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~-~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~qafr~~d 189 (694)
T KOG0751|consen 111 EVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHI-PFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQLEHAEQAFREKD 189 (694)
T ss_pred HHHHHHhcccCCCceehHHHHHHHhccccccCC-CccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78999999999999999999988863 111000 0011111 11111 234566788999999
Q ss_pred cCCCCCCCCccccHHHHHHHHHHHHHHhh---------h-cCCCc-chh---h-----hhHHHHHHHHHHHHHhccCCCC
Q psy10339 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMY---------K-EGMPQ-NDL---M-----ERAEEMERMREHVFKEADVNRD 394 (476)
Q Consensus 334 ~D~dg~~GDG~IS~eEL~~~~~~el~kl~---------~-e~~~~-~e~---~-----e~~eE~~~M~e~mi~EvD~DgD 394 (476)
+. ++|+||.=++..++......+. . ..+.+ ... + .-...+..++.....-.++-+|
T Consensus 190 ~~-----~ng~is~Ldfq~imvt~~~h~lt~~v~~nlv~vagg~~~H~vSf~yf~afnslL~~melirk~y~s~~~~~~d 264 (694)
T KOG0751|consen 190 KA-----KNGFISVLDFQDIMVTIRIHLLTPFVEENLVSVAGGNDSHQVSFSYFNAFNSLLNNMELIRKIYSSLAGTRKD 264 (694)
T ss_pred cc-----CCCeeeeechHhhhhhhhhhcCCHHHhhhhhhhcCCCCccccchHHHHHHHHHHhhHHHHHHHHHHhcccccc
Confidence 99 9999998777776642111110 0 00000 000 0 0001222233334555677778
Q ss_pred CcccHHHHHHHHhcccCCCC----CCCcc---cCCCCCCCHHHHHHHH
Q psy10339 395 RLISWEEFLEMTRRQEFNQD----PGWKP---IDQEQVYSQAEVEAYE 435 (476)
Q Consensus 395 G~ISfeEFl~~m~~~~~~~~----~~w~~---~d~~g~is~~EL~~~~ 435 (476)
-.|++++|......-.--.. --|.. ...-|.+|-+.+.+..
T Consensus 265 ~~~~kdq~~~~a~~~~q~t~~~idilf~la~~~~~~~~ltl~Di~~I~ 312 (694)
T KOG0751|consen 265 VEVTKDQFSLAAQTSKQVTPLEIDILFQLADLYHPMGRLTLADIERIA 312 (694)
T ss_pred hhhhHHHHHHHHHHhhccCchhhhhhhhhhhcccccccccHHHHHhhC
Confidence 88888888766544211101 11221 2345677777766654
No 99
>KOG0751|consensus
Probab=83.52 E-value=8.3 Score=42.72 Aligned_cols=67 Identities=21% Similarity=0.197 Sum_probs=46.8
Q ss_pred CCCCCCHHhh---hhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCc
Q psy10339 267 GNTEFNPKAF---FAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNH 343 (476)
Q Consensus 267 ~~~~f~pk~~---F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG 343 (476)
+.+.|+++.+ =...|.-.||.|||+||.+.=. +-. .++ .+-..+|..||+. |+|
T Consensus 67 ~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~------~lC-~pD-----------al~~~aFqlFDr~-----~~~ 123 (694)
T KOG0751|consen 67 NESNFNDKIVRLLASIADQTKDGLISFQEFRAFES------VLC-APD-----------ALFEVAFQLFDRL-----GNG 123 (694)
T ss_pred ccccCChHHHHHHHhhhhhcccccccHHHHHHHHh------hcc-Cch-----------HHHHHHHHHhccc-----CCC
Confidence 4555665433 3556888999999999986421 101 111 1234799999999 999
Q ss_pred cccHHHHHHHHHH
Q psy10339 344 VWDEEEVKMLFLK 356 (476)
Q Consensus 344 ~IS~eEL~~~~~~ 356 (476)
.+|.+++..+|.+
T Consensus 124 ~vs~~~~~~if~~ 136 (694)
T KOG0751|consen 124 EVSFEDVADIFGQ 136 (694)
T ss_pred ceehHHHHHHHhc
Confidence 9999999999863
No 100
>KOG3555|consensus
Probab=82.76 E-value=0.99 Score=47.59 Aligned_cols=58 Identities=24% Similarity=0.319 Sum_probs=45.7
Q ss_pred HHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHH
Q psy10339 325 REHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLE 404 (476)
Q Consensus 325 re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~ 404 (476)
..++|...|.| .||.++..||+.+-.. .+ ++-+..+|+..|+..||.||-.||..
T Consensus 252 ~gWMFnklD~N-----~Dl~Ld~sEl~~I~ld-----------kn---------E~CikpFfnsCD~~kDg~iS~~EWC~ 306 (434)
T KOG3555|consen 252 LGWMFNKLDTN-----YDLLLDQSELRAIELD-----------KN---------EACIKPFFNSCDTYKDGSISTNEWCY 306 (434)
T ss_pred hhhhhhccccc-----cccccCHHHhhhhhcc-----------Cc---------hhHHHHHHhhhcccccCccccchhhh
Confidence 45899999999 9999999999987422 11 11235689999999999999999986
Q ss_pred HHh
Q psy10339 405 MTR 407 (476)
Q Consensus 405 ~m~ 407 (476)
-..
T Consensus 307 CF~ 309 (434)
T KOG3555|consen 307 CFQ 309 (434)
T ss_pred hhc
Confidence 443
No 101
>KOG3555|consensus
Probab=80.71 E-value=1.3 Score=46.68 Aligned_cols=61 Identities=20% Similarity=0.192 Sum_probs=48.0
Q ss_pred CCHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHH
Q psy10339 271 FNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350 (476)
Q Consensus 271 f~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL 350 (476)
.++.=||..+|.|.||.++..|+.++-. .. + +...+.+|..-|.. .||.||..||
T Consensus 250 ds~gWMFnklD~N~Dl~Ld~sEl~~I~l--------dk---n---------E~CikpFfnsCD~~-----kDg~iS~~EW 304 (434)
T KOG3555|consen 250 DSLGWMFNKLDTNYDLLLDQSELRAIEL--------DK---N---------EACIKPFFNSCDTY-----KDGSISTNEW 304 (434)
T ss_pred hhhhhhhhccccccccccCHHHhhhhhc--------cC---c---------hhHHHHHHhhhccc-----ccCccccchh
Confidence 3457799999999999999999986531 11 1 12345799999999 8999999999
Q ss_pred HHHHHH
Q psy10339 351 KMLFLK 356 (476)
Q Consensus 351 ~~~~~~ 356 (476)
-..|.+
T Consensus 305 C~CF~k 310 (434)
T KOG3555|consen 305 CYCFQK 310 (434)
T ss_pred hhhhcc
Confidence 999865
No 102
>KOG0169|consensus
Probab=79.48 E-value=10 Score=43.66 Aligned_cols=105 Identities=20% Similarity=0.265 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHH
Q psy10339 321 MERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWE 400 (476)
Q Consensus 321 ~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfe 400 (476)
...++...|..+|+| .+|.++..+...+++...-.+ .+. -+..++++.|.-++|.|..+
T Consensus 134 ~~~wi~~~~~~ad~~-----~~~~~~~~~~~~~~~~~n~~l--------------~~~--~~~~~f~e~~~~~~~k~~~~ 192 (746)
T KOG0169|consen 134 REHWIHSIFQEADKN-----KNGHMSFDEVLDLLKQLNVQL--------------SES--KARRLFKESDNSQTGKLEEE 192 (746)
T ss_pred HHHHHHHHHHHHccc-----cccccchhhHHHHHHHHHHhh--------------hHH--HHHHHHHHHHhhccceehHH
Confidence 344567899999999 999999999888876432111 011 12357888999999999999
Q ss_pred HHHHHHhcccCCCCC---CCccc-CCCCCCCHHHHHHHHHHHH-------HHHHHHHH
Q psy10339 401 EFLEMTRRQEFNQDP---GWKPI-DQEQVYSQAEVEAYERQRQ-------AEVDRLVR 447 (476)
Q Consensus 401 EFl~~m~~~~~~~~~---~w~~~-d~~g~is~~EL~~~~~~l~-------eE~~~mi~ 447 (476)
+|+.+-... ..+++ .|..+ ++.+.+|..+|.+|+...+ ++|+.+|.
T Consensus 193 ~~~~~~~~~-~~rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~ 249 (746)
T KOG0169|consen 193 EFVKFRKEL-TKRPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIE 249 (746)
T ss_pred HHHHHHHhh-ccCchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHH
Confidence 999876543 22222 12222 5699999999999997764 67777773
No 103
>KOG1955|consensus
Probab=79.37 E-value=2.2 Score=46.94 Aligned_cols=69 Identities=13% Similarity=0.189 Sum_probs=54.0
Q ss_pred cCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHH
Q psy10339 218 LMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLF 297 (476)
Q Consensus 218 ~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm 297 (476)
..|+|||.-|-..|+-.+.+-.|-| ||+.+ +.++.+. -+.. .++..++.+-|.|.||.++..||+++|
T Consensus 224 ~IT~EQReYYvnQFrtvQpDp~gfi-------sGsaA--knFFtKS-klpi--~ELshIWeLsD~d~DGALtL~EFcAAf 291 (737)
T KOG1955|consen 224 QITPEQREYYVNQFRTVQPDPHGFI-------SGSAA--KNFFTKS-KLPI--EELSHIWELSDVDRDGALTLSEFCAAF 291 (737)
T ss_pred ccCHHHHHHHHhhhhcccCCccccc-------ccHHH--Hhhhhhc-cCch--HHHHHHHhhcccCccccccHHHHHhhH
Confidence 4799999999999998887766666 66653 3445554 2333 445899999999999999999999999
Q ss_pred H
Q psy10339 298 L 298 (476)
Q Consensus 298 ~ 298 (476)
.
T Consensus 292 H 292 (737)
T KOG1955|consen 292 H 292 (737)
T ss_pred h
Confidence 6
No 104
>KOG4578|consensus
Probab=78.39 E-value=1.6 Score=45.80 Aligned_cols=62 Identities=16% Similarity=0.167 Sum_probs=44.1
Q ss_pred hhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHH
Q psy10339 275 AFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLF 354 (476)
Q Consensus 275 ~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~ 354 (476)
=-|..+|+|.++.|+..|+.-+= .++... ......-+.+|++.|.| +|-.||.+||+..+
T Consensus 337 w~F~qLdkN~nn~i~rrEwKpFK-----~~l~k~----------s~~rkC~rk~~~yCDlN-----kDKkISl~Ew~~CL 396 (421)
T KOG4578|consen 337 WYFNQLDKNSNNDIERREWKPFK-----RVLLKK----------SKPRKCSRKFFKYCDLN-----KDKKISLDEWRGCL 396 (421)
T ss_pred eeeeeecccccCccchhhcchHH-----HHHHhh----------ccHHHHhhhcchhcccC-----CCceecHHHHhhhh
Confidence 35999999999999999875321 111000 01122345799999999 99999999999987
Q ss_pred HH
Q psy10339 355 LK 356 (476)
Q Consensus 355 ~~ 356 (476)
..
T Consensus 397 ~~ 398 (421)
T KOG4578|consen 397 GV 398 (421)
T ss_pred cc
Confidence 53
No 105
>KOG0046|consensus
Probab=75.25 E-value=4.9 Score=44.59 Aligned_cols=72 Identities=18% Similarity=0.189 Sum_probs=58.9
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCC---CCCCHHhhhhhccCCCCCcccHHH
Q psy10339 216 LSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGN---TEFNPKAFFAMHDLDGNHVWDEEE 292 (476)
Q Consensus 216 ~~~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~---~~f~pk~~F~l~D~DgDG~Id~eE 292 (476)
...+|.++-+++.++|...+ +++|.+ +..+|.+++.+. ++.. ....++++....+.|.+|.|+++|
T Consensus 10 ~~~~tq~El~~l~~kF~~~d-~~~G~v---------~~~~l~~~f~k~-~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~ 78 (627)
T KOG0046|consen 10 QSQLTQEELRELKEKFNKLD-DQKGYV---------TVYELPDAFKKA-KLPLGYFVREEIKEILGEVGVDADGRVEFEE 78 (627)
T ss_pred cccccHHHHHHHHHHHHhhc-CCCCee---------ehHHhHHHHHHh-cccccchhHHHHHHHHhccCCCcCCccCHHH
Confidence 45689999999999999998 888888 788999988885 3222 123368899999999999999999
Q ss_pred HHHHHH
Q psy10339 293 VKMLFL 298 (476)
Q Consensus 293 f~alm~ 298 (476)
|..++.
T Consensus 79 f~~~~~ 84 (627)
T KOG0046|consen 79 FVGIFL 84 (627)
T ss_pred HHHHHH
Confidence 998664
No 106
>PF11770 GAPT: GRB2-binding adapter (GAPT); InterPro: IPR021082 This entry represents a family of transmembrane proteins which bind the growth factor receptor-bound protein 2 (GRB2) in B cells []. In contrast to other transmembrane adaptor proteins, GAPT, which this entry represents, is not phosphorylated upon BCR ligation. It associates with GRB2 constitutively through its proline-rich region [].
Probab=73.84 E-value=2.3 Score=40.00 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=28.6
Q ss_pred CCCCCCCcchhhhhHHHHHHHHHHHHHHhhhc
Q psy10339 1 MLPNIGNTATSMTLKLFYLTLCIIYLHQFINA 32 (476)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 32 (476)
||-..||+.+-+..++++|+||+++.+.|++-
T Consensus 1 mL~s~gn~sv~i~igi~Ll~lLl~cgiGcvwh 32 (158)
T PF11770_consen 1 MLKSCGNTSVAISIGISLLLLLLLCGIGCVWH 32 (158)
T ss_pred CcccccCchHHHHHHHHHHHHHHHHhcceEEE
Confidence 88999999999999999988999998888864
No 107
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=73.11 E-value=13 Score=30.21 Aligned_cols=63 Identities=11% Similarity=0.229 Sum_probs=41.2
Q ss_pred HHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCC----CCCcccHHHH
Q psy10339 327 HVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVN----RDRLISWEEF 402 (476)
Q Consensus 327 ~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~D----gDG~ISfeEF 402 (476)
.+|..+ .+ +.+.||.++|...+..+-+ ... .+.+.+ ..+|..+..+ ..|.+|++.|
T Consensus 4 ~if~~y-s~-----~~~~mt~~~f~~FL~~eQ~-------~~~---~~~~~~----~~li~~~~~~~~~~~~~~lt~~gF 63 (83)
T PF09279_consen 4 EIFRKY-SS-----DKEYMTAEEFRRFLREEQG-------EPR---LTDEQA----KELIEKFEPDERNRQKGQLTLEGF 63 (83)
T ss_dssp HHHHHH-CT-----TSSSEEHHHHHHHHHHTSS--------TT---SSHHHH----HHHHHHHHHHHHHHCTTEEEHHHH
T ss_pred HHHHHH-hC-----CCCcCCHHHHHHHHHHHhc-------ccc---CcHHHH----HHHHHHHccchhhcccCCcCHHHH
Confidence 466666 44 6899999999999875311 100 122333 3455555443 5799999999
Q ss_pred HHHHhcc
Q psy10339 403 LEMTRRQ 409 (476)
Q Consensus 403 l~~m~~~ 409 (476)
..++.+.
T Consensus 64 ~~fL~S~ 70 (83)
T PF09279_consen 64 TRFLFSD 70 (83)
T ss_dssp HHHHHST
T ss_pred HHHHCCC
Confidence 9999875
No 108
>KOG1955|consensus
Probab=72.75 E-value=6.9 Score=43.27 Aligned_cols=65 Identities=22% Similarity=0.328 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccH
Q psy10339 320 EMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISW 399 (476)
Q Consensus 320 ~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISf 399 (476)
...+..-.-|+..-.| -+|+|+-.--+.+|++. . ...+|+ .+|....|.|.||.+++
T Consensus 228 EQReYYvnQFrtvQpD-----p~gfisGsaAknFFtKS-------k-------lpi~EL----shIWeLsD~d~DGALtL 284 (737)
T KOG1955|consen 228 EQREYYVNQFRTVQPD-----PHGFISGSAAKNFFTKS-------K-------LPIEEL----SHIWELSDVDRDGALTL 284 (737)
T ss_pred HHHHHHHhhhhcccCC-----cccccccHHHHhhhhhc-------c-------CchHHH----HHHHhhcccCccccccH
Confidence 3344445678888888 89999999999988752 1 122455 46889999999999999
Q ss_pred HHHHHHHh
Q psy10339 400 EEFLEMTR 407 (476)
Q Consensus 400 eEFl~~m~ 407 (476)
.||+..|.
T Consensus 285 ~EFcAAfH 292 (737)
T KOG1955|consen 285 SEFCAAFH 292 (737)
T ss_pred HHHHhhHh
Confidence 99998654
No 109
>KOG1029|consensus
Probab=72.67 E-value=5.9 Score=45.81 Aligned_cols=68 Identities=12% Similarity=0.205 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 219 MTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 219 l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
.-.+.|.+|.+.|.-.++.+.|++ |-.|-..++..+ |+.-.. +-.++.+-|.||||.++.+||.-.|.
T Consensus 189 Vp~~~klKY~QlFNa~DktrsG~L---------sg~qaR~aL~qS-~Lpq~~--LA~IW~LsDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 189 VPQHNKLKYRQLFNALDKTRSGYL---------SGQQARSALGQS-GLPQNQ--LAHIWTLSDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred ccchhhhHHHHHhhhccccccccc---------ccHHHHHHHHhc-CCchhh--HhhheeeeccCCCCcccHHHHHHHHH
Confidence 345788899999999999999888 556666666655 665544 48899999999999999999977664
No 110
>PF10731 Anophelin: Thrombin inhibitor from mosquito; InterPro: IPR018932 Members of this family are all inhibitors of thrombin, the peptidase that is at the end of the blood coagulation cascade and which creates the clot by cleaving fibrinogen. The interaction between thrombin and fibrinogen involves two different areas of contact - via the thrombin active site and via a second substrate-binding site known as an exosite. The inhibitor acts by blocking the exosite, rather than by interacting with the active site. The inhibitors are from mosquitoes that feed on human blood and which, by inhibiting thrombin, prevent the blood from clotting and keep it flowing.
Probab=69.13 E-value=3.8 Score=33.03 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=22.1
Q ss_pred hhhHHHHHHHHHHHHHHhhhccCCCCC
Q psy10339 12 MTLKLFYLTLCIIYLHQFINALPVQQK 38 (476)
Q Consensus 12 ~~~~~~~~~l~~~~~~~~~~~~pv~~~ 38 (476)
|..+|+++.||++.+++.+++.|--..
T Consensus 1 MA~Kl~vialLC~aLva~vQ~APQYa~ 27 (65)
T PF10731_consen 1 MASKLIVIALLCVALVAIVQSAPQYAP 27 (65)
T ss_pred CcchhhHHHHHHHHHHHHHhcCcccCC
Confidence 567888998999999999999995444
No 111
>KOG0035|consensus
Probab=68.80 E-value=11 Score=44.33 Aligned_cols=99 Identities=10% Similarity=-0.031 Sum_probs=67.3
Q ss_pred HHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHH
Q psy10339 325 REHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLE 404 (476)
Q Consensus 325 re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~ 404 (476)
.+++|..||.. ..|.++.+++..++...|... . ..+....-|-.+++..|.++-|+++|.+|..
T Consensus 749 lrAle~~~~~~-----d~~aa~~e~~~~~Lmslg~~~-----e------~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~d 812 (890)
T KOG0035|consen 749 LRALENEQDKI-----DGGAASPEELLRCLMSLGYNT-----E------EEEQGIAEWFRLVNKKNPLIQGQVQLLEFED 812 (890)
T ss_pred HHHHHhHHHHh-----hcccCCHHHHHHHHHhcCccc-----c------hhHHHHHHHHHHHhccCcccccceeHHHHHh
Confidence 45799999999 889999999999987644211 1 1122223345689999999999999999999
Q ss_pred HHhcccCCCC------CCCcccCC-CCCCCHHHHHHHHHHHH
Q psy10339 405 MTRRQEFNQD------PGWKPIDQ-EQVYSQAEVEAYERQRQ 439 (476)
Q Consensus 405 ~m~~~~~~~~------~~w~~~d~-~g~is~~EL~~~~~~l~ 439 (476)
.|.+.-...+ .+|+.+=+ .-++..+||.+=+..+.
T Consensus 813 dl~R~~e~l~~~~r~i~s~~d~~ktk~~lL~eEL~~~~d~lv 854 (890)
T KOG0035|consen 813 DLEREYEDLDTELRAILAFEDWAKTKAYLLLEELVRERDELV 854 (890)
T ss_pred HhhhhhhhhcHHHHHHHHHHHHHcchhHHHHHHHHhhccHhh
Confidence 9988643322 22332211 23689999988333443
No 112
>KOG4578|consensus
Probab=67.15 E-value=4.2 Score=42.82 Aligned_cols=65 Identities=25% Similarity=0.264 Sum_probs=46.1
Q ss_pred HHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHH
Q psy10339 324 MREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFL 403 (476)
Q Consensus 324 ~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl 403 (476)
...+-|...|+| .++.|...||+-+-. .+.+. ....+-...+++-.|.|+|..||++|++
T Consensus 334 vv~w~F~qLdkN-----~nn~i~rrEwKpFK~-~l~k~--------------s~~rkC~rk~~~yCDlNkDKkISl~Ew~ 393 (421)
T KOG4578|consen 334 VVHWYFNQLDKN-----SNNDIERREWKPFKR-VLLKK--------------SKPRKCSRKFFKYCDLNKDKKISLDEWR 393 (421)
T ss_pred eeeeeeeeeccc-----ccCccchhhcchHHH-HHHhh--------------ccHHHHhhhcchhcccCCCceecHHHHh
Confidence 334679999999 999999999876422 11111 0111222468999999999999999999
Q ss_pred HHHhc
Q psy10339 404 EMTRR 408 (476)
Q Consensus 404 ~~m~~ 408 (476)
.-+..
T Consensus 394 ~CL~~ 398 (421)
T KOG4578|consen 394 GCLGV 398 (421)
T ss_pred hhhcc
Confidence 86654
No 113
>PRK12750 cpxP periplasmic repressor CpxP; Reviewed
Probab=65.79 E-value=1.3e+02 Score=28.77 Aligned_cols=53 Identities=26% Similarity=0.379 Sum_probs=32.7
Q ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCHHHHHHHHHHHHHH
Q psy10339 171 PHSFEINDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEE 234 (476)
Q Consensus 171 ~~~f~~~dl~~li~~~~~dl~~~d~~r~~~fk~yem~k~~e~~~~~~~l~eeer~e~~~~~~e~ 234 (476)
..+|+..-++.|+.+... .-..|+-++-+ ..|+- |.-||++||.+|.+.+.+-
T Consensus 100 a~~FDeaavral~~~~~~----~~~e~~v~~~~----~~~~~---~~vLTpEQRak~~e~~~~r 152 (170)
T PRK12750 100 ADDFDEAAANDLAKQMVE----KQVERRVKMLE----KRHQM---LSILTPEQKAKFQELQQER 152 (170)
T ss_pred cCCCCHHHHHHHHHHHHH----HHHHHHHHHHH----HHHHH---HHhCCHHHHHHHHHHHHHH
Confidence 357888888887765442 22233333321 12222 8889999999998876554
No 114
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=61.44 E-value=14 Score=27.70 Aligned_cols=33 Identities=30% Similarity=0.609 Sum_probs=23.6
Q ss_pred HHHHHHHHhhChHHHHHHhhc-ChHHhhhhhhHHHh
Q psy10339 87 LNEVVEALESDPEFRKKLENA-SEADIRSGKIAQEL 121 (476)
Q Consensus 87 l~evi~~Le~dp~frekl~~a-~~~di~~gk~~~~l 121 (476)
|+.-+..+.+||.||++|..+ +.+++-. ||++.
T Consensus 6 l~~Fl~~~~~d~~l~~~l~~~~~~~e~~~--lA~~~ 39 (49)
T PF07862_consen 6 LKAFLEKVKSDPELREQLKACQNPEEVVA--LAREA 39 (49)
T ss_pred HHHHHHHHhcCHHHHHHHHhcCCHHHHHH--HHHHc
Confidence 445566678999999999997 6777643 45443
No 115
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=53.03 E-value=12 Score=24.03 Aligned_cols=15 Identities=13% Similarity=0.406 Sum_probs=12.2
Q ss_pred cCCCCCcccHHHHHH
Q psy10339 281 DLDGNHVWDEEEVKM 295 (476)
Q Consensus 281 D~DgDG~Id~eEf~a 295 (476)
|.|+||.|+.-++..
T Consensus 1 DvN~DG~vna~D~~~ 15 (21)
T PF00404_consen 1 DVNGDGKVNAIDLAL 15 (21)
T ss_dssp -TTSSSSSSHHHHHH
T ss_pred CCCCCCcCCHHHHHH
Confidence 789999999988764
No 116
>KOG0998|consensus
Probab=52.26 E-value=15 Score=43.28 Aligned_cols=152 Identities=15% Similarity=0.246 Sum_probs=92.7
Q ss_pred CCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 219 MTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 219 l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~Gl~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
++..++.+|...|..+... .|.. +-+...-++... ++....+ ..++.+-|.|.+|.+++.||..+|.
T Consensus 123 ~~~qe~aky~q~f~s~~p~-~g~~---------sg~~~~pil~~s-~Lp~~~l--~~iw~l~d~d~~g~Ld~~ef~~am~ 189 (847)
T KOG0998|consen 123 ITPQEQAKYDQIFRSLSPS-NGLL---------SGDKAKPILLNS-KLPSDVL--GRIWELSDIDKDGNLDRDEFAVAMH 189 (847)
T ss_pred CCHHHHHHHHHHHhccCCC-CCcc---------ccchhhhhhhcC-CCChhhh--ccccccccccccCCCChhhhhhhhh
Confidence 7889999998887766433 2122 223344445544 4544333 6788999999999999999988886
Q ss_pred HHHHHHhc----c--C-CChh-------h----------------------------HhH--------------------
Q psy10339 299 KELDKMYK----E--G-MPQN-------D----------------------------LME-------------------- 316 (476)
Q Consensus 299 keL~k~~~----~--~-d~e~-------d----------------------------~~e-------------------- 316 (476)
-... ++. + . .+.. . +..
T Consensus 190 l~~~-~l~~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q 268 (847)
T KOG0998|consen 190 LIND-LLNGNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQ 268 (847)
T ss_pred HHHH-HhhcccCCCCccCCcccCCcchhcccccCcccccccccccccccccccccccccchhcccCCccccccccccccc
Confidence 2111 111 0 0 0000 0 000
Q ss_pred -------HH-HHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHh
Q psy10339 317 -------RA-EEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKE 388 (476)
Q Consensus 317 -------~~-~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~E 388 (476)
.. .........+|...|.+ .+|.|+-.+.+.+|...+ .. ... +.++...
T Consensus 269 ~~~s~~~~vsp~d~~~~~~if~q~d~~-----~dG~I~s~~~~~~f~~~g-------l~-------~~~----l~~~w~l 325 (847)
T KOG0998|consen 269 LIVSWSPKVSPSDKQKYSKIFSQVDKD-----NDGSISSNEARNIFLPFG-------LS-------KPR----LAHVWLL 325 (847)
T ss_pred cccccCcccChHHHHHHHHHHHhcccc-----CCCcccccccccccccCC-------CC-------hhh----hhhhhhh
Confidence 00 00111223478999999 888998888888775421 01 112 2467899
Q ss_pred ccCCCCCcccHHHHHHHHh
Q psy10339 389 ADVNRDRLISWEEFLEMTR 407 (476)
Q Consensus 389 vD~DgDG~ISfeEFl~~m~ 407 (476)
+|+++.|.|++.+|.-.|-
T Consensus 326 ~d~~n~~~ls~~ef~~~~~ 344 (847)
T KOG0998|consen 326 ADTQNTGTLSKDEFALAMH 344 (847)
T ss_pred cchhccCcccccccchhhh
Confidence 9999999999999986543
No 117
>KOG2243|consensus
Probab=49.01 E-value=22 Score=43.80 Aligned_cols=57 Identities=19% Similarity=0.451 Sum_probs=42.9
Q ss_pred HHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHHHHH
Q psy10339 328 VFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMT 406 (476)
Q Consensus 328 ~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl~~m 406 (476)
.|+.||.| |.|.||..++..+|.. .+-| +..++ +.++.-+.+|.+...+|++|+.-.
T Consensus 4062 tfkeydpd-----gkgiiskkdf~kame~--~k~y-----------tqse~----dfllscae~dend~~~y~dfv~rf 4118 (5019)
T KOG2243|consen 4062 TFKEYDPD-----GKGIISKKDFHKAMEG--HKHY-----------TQSEI----DFLLSCAEADENDMFDYEDFVDRF 4118 (5019)
T ss_pred cchhcCCC-----CCccccHHHHHHHHhc--cccc-----------hhHHH----HHHHHhhccCccccccHHHHHHHh
Confidence 47778888 9999999999998843 2222 12232 457888889999999999999754
No 118
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=47.69 E-value=32 Score=33.24 Aligned_cols=54 Identities=19% Similarity=0.422 Sum_probs=41.4
Q ss_pred HHHHHhccCCCCCcccHHHHHHHHhcccCCCCC-CCc-------cc-----CCCCCCCHHHHHHHHH
Q psy10339 383 EHVFKEADVNRDRLISWEEFLEMTRRQEFNQDP-GWK-------PI-----DQEQVYSQAEVEAYER 436 (476)
Q Consensus 383 e~mi~EvD~DgDG~ISfeEFl~~m~~~~~~~~~-~w~-------~~-----d~~g~is~~EL~~~~~ 436 (476)
+.||+..+..+.+.+|+.|...|+..+....++ +|- .. |++|.++.+.++.+-.
T Consensus 99 e~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~~d~dG~l~Ke~iR~vYD 165 (174)
T PF05042_consen 99 EEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILAKDKDGFLSKEDIRGVYD 165 (174)
T ss_pred HHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHHcCcCCcEeHHHHhhhcc
Confidence 457888998888899999999999886443332 343 22 8999999999998763
No 119
>KOG0042|consensus
Probab=47.68 E-value=19 Score=40.55 Aligned_cols=65 Identities=20% Similarity=0.202 Sum_probs=50.7
Q ss_pred HHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhccCCCCCcccHHHHH
Q psy10339 324 MREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFL 403 (476)
Q Consensus 324 ~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~EvD~DgDG~ISfeEFl 403 (476)
.++.-|..+|.| ..|+++.+.+..+|.++.... + ++. +..++.++|.+-.|.+++.||.
T Consensus 594 ~~~~rf~~lD~~-----k~~~~~i~~v~~vlk~~~~~~-----d--------~~~---~~~~l~ea~~~~~g~v~l~e~~ 652 (680)
T KOG0042|consen 594 RRKTRFAFLDAD-----KKAYQAIADVLKVLKSENVGW-----D--------EDR---LHEELQEADENLNGFVELREFL 652 (680)
T ss_pred HHHHHHHhhcch-----HHHHHHHHHHHHHHHHhcCCC-----C--------HHH---HHHHHHHHHHhhcceeeHHHHH
Confidence 345678999999 999999999999998754111 1 111 3567899999999999999999
Q ss_pred HHHhcc
Q psy10339 404 EMTRRQ 409 (476)
Q Consensus 404 ~~m~~~ 409 (476)
++|+..
T Consensus 653 q~~s~~ 658 (680)
T KOG0042|consen 653 QLMSAI 658 (680)
T ss_pred HHHHHH
Confidence 998764
No 120
>PF12728 HTH_17: Helix-turn-helix domain
Probab=45.18 E-value=22 Score=26.28 Aligned_cols=30 Identities=27% Similarity=0.398 Sum_probs=25.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCCC
Q psy10339 425 VYSQAEVEAYERQRQAEVDRLVREGKIPSI 454 (476)
Q Consensus 425 ~is~~EL~~~~~~l~eE~~~mi~~~~~~~~ 454 (476)
++|.+|+++++.--..-+..|++.|.||+.
T Consensus 1 ~lt~~e~a~~l~is~~tv~~~~~~g~i~~~ 30 (51)
T PF12728_consen 1 YLTVKEAAELLGISRSTVYRWIRQGKIPPF 30 (51)
T ss_pred CCCHHHHHHHHCcCHHHHHHHHHcCCCCeE
Confidence 478899999887666779999999999887
No 121
>PF08572 PRP3: pre-mRNA processing factor 3 (PRP3); InterPro: IPR013881 Pre-mRNA processing factor 3 (PRP3) is a U4/U6-associated splicing factor. The human PRP3 has been implicated in autosomal retinitis pigmentosa [].
Probab=42.06 E-value=37 Score=33.81 Aligned_cols=33 Identities=33% Similarity=0.456 Sum_probs=28.2
Q ss_pred CCCCHHHHHHHHHHH----HHHHHHHHHcCCCCCCCC
Q psy10339 424 QVYSQAEVEAYERQR----QAEVDRLVREGKIPSIPP 456 (476)
Q Consensus 424 g~is~~EL~~~~~~l----~eE~~~mi~~~~~~~~~~ 456 (476)
=++|..|-+...++. ..|-+.+|+-|++||+||
T Consensus 139 ~~LTkkErKKlRr~rR~e~~kEkq~kIrlGL~ppP~P 175 (223)
T PF08572_consen 139 VYLTKKERKKLRRQRRQEKQKEKQDKIRLGLEPPPPP 175 (223)
T ss_pred cccChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 468999999988543 488999999999999998
No 122
>PF09325 Vps5: Vps5 C terminal like; InterPro: IPR015404 Vps5 is a sorting nexin that functions in membrane trafficking. This is the C-terminal dimerisation domain [].
Probab=41.44 E-value=3.2e+02 Score=26.08 Aligned_cols=52 Identities=15% Similarity=0.256 Sum_probs=40.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCHHHHH
Q psy10339 174 FEINDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKE 225 (476)
Q Consensus 174 f~~~dl~~li~~~~~dl~~~d~~r~~~fk~yem~k~~e~~~~~~~l~eeer~ 225 (476)
-++..+..-+..+..+++..-..=+.||.+|+..|..+.+.-|..+-+-+..
T Consensus 170 ~ei~~~~~~~~~~~~~~~~is~~~k~E~~rf~~~k~~d~k~~l~~~~~~~i~ 221 (236)
T PF09325_consen 170 NEIEEAERRVEQAKDEFEEISENIKKELERFEKEKVKDFKSMLEEYAESQIE 221 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3677888888889999999999999999999988877777766665444443
No 123
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=41.39 E-value=35 Score=27.72 Aligned_cols=68 Identities=10% Similarity=0.136 Sum_probs=40.8
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKM 352 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~ 352 (476)
+..+|..+ .++.++||.++|...+..+ .+.+..+. ..++.+|..|..+.. ....|.+|.+.|..
T Consensus 2 i~~if~~y-s~~~~~mt~~~f~~FL~~e------Q~~~~~~~--------~~~~~li~~~~~~~~-~~~~~~lt~~gF~~ 65 (83)
T PF09279_consen 2 IEEIFRKY-SSDKEYMTAEEFRRFLREE------QGEPRLTD--------EQAKELIEKFEPDER-NRQKGQLTLEGFTR 65 (83)
T ss_dssp HHHHHHHH-CTTSSSEEHHHHHHHHHHT------SS-TTSSH--------HHHHHHHHHHHHHHH-HHCTTEEEHHHHHH
T ss_pred HHHHHHHH-hCCCCcCCHHHHHHHHHHH------hccccCcH--------HHHHHHHHHHccchh-hcccCCcCHHHHHH
Confidence 56788888 4489999999999988532 22211111 112344555543300 01468999999998
Q ss_pred HHHH
Q psy10339 353 LFLK 356 (476)
Q Consensus 353 ~~~~ 356 (476)
.+.+
T Consensus 66 fL~S 69 (83)
T PF09279_consen 66 FLFS 69 (83)
T ss_dssp HHHS
T ss_pred HHCC
Confidence 8754
No 124
>KOG1707|consensus
Probab=41.34 E-value=99 Score=35.23 Aligned_cols=30 Identities=30% Similarity=0.380 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHH
Q psy10339 322 ERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLK 356 (476)
Q Consensus 322 ~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~ 356 (476)
.+....+|-.||.| +||.++.+||..+|..
T Consensus 314 ~~Fl~~~f~~~D~d-----~Dg~L~p~El~~LF~~ 343 (625)
T KOG1707|consen 314 YRFLVDVFEKFDRD-----NDGALSPEELKDLFST 343 (625)
T ss_pred HHHHHHHHHhccCC-----CCCCcCHHHHHHHhhh
Confidence 34557899999999 9999999999999864
No 125
>PF06518 DUF1104: Protein of unknown function (DUF1104); InterPro: IPR009488 This family consists of several hypothetical proteins of unknown function which appear to be found exclusively in Helicobacter pylori.; PDB: 2XRH_A.
Probab=40.49 E-value=2.4e+02 Score=24.56 Aligned_cols=52 Identities=19% Similarity=0.259 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCHHHHHHHHHHHHHHHHhhc
Q psy10339 185 QVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRK 239 (476)
Q Consensus 185 ~~~~dl~~~d~~r~~~fk~yem~k~~e~~~~~~~l~eeer~e~~~~~~e~~~~~~ 239 (476)
.+.+-+..+....+.+|+.- =+-...+.++.||.++|.++.+.+.+.-.++.
T Consensus 29 Ei~KR~~~m~~~~~k~f~~~---~~~~~~kn~~~ms~~e~~k~~~ev~k~~~~~~ 80 (93)
T PF06518_consen 29 EIHKRLKKMKEKEAKDFKKQ---FKEAARKNLSKMSVEERKKRREEVRKALEKRI 80 (93)
T ss_dssp HHHHHHHHS-HHHHHHHHHH---HHHHHHHHHTTS-HHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHhCCHHHHHHHHHH---HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555555532 23345677888999999888888877665544
No 126
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=39.82 E-value=26 Score=24.76 Aligned_cols=30 Identities=27% Similarity=0.459 Sum_probs=23.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCCC
Q psy10339 425 VYSQAEVEAYERQRQAEVDRLVREGKIPSI 454 (476)
Q Consensus 425 ~is~~EL~~~~~~l~eE~~~mi~~~~~~~~ 454 (476)
++|..|++++..--..-+.+|++.|.||++
T Consensus 1 ~lt~~e~a~~lgis~~ti~~~~~~g~i~~~ 30 (49)
T TIGR01764 1 YLTVEEAAEYLGVSKDTVYRLIHEGELPAY 30 (49)
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHcCCCCeE
Confidence 367777777776556889999999999975
No 127
>PLN02952 phosphoinositide phospholipase C
Probab=39.79 E-value=2.7e+02 Score=31.82 Aligned_cols=97 Identities=14% Similarity=0.259 Sum_probs=52.8
Q ss_pred CCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHhhh
Q psy10339 284 GNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYK 363 (476)
Q Consensus 284 gDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL~~~~~~el~kl~~ 363 (476)
+.|.+++.+|..+.+. +. .....+..++. .+|..+-. +++.+|.++|..++..+-+.
T Consensus 13 ~~g~l~f~~f~~f~~~-~k--~~~~~~r~ei~-----------~lf~~~~~------~~~~mt~~~l~~FL~~~Q~e--- 69 (599)
T PLN02952 13 DSGSYNYKMFNLFNRK-FK--ITEAEPPDDVK-----------DVFCKFSV------GGGHMGADQLRRFLVLHQDE--- 69 (599)
T ss_pred cCCCcCHHHHHHHHHH-hc--cccCCChHHHH-----------HHHHHHhC------CCCccCHHHHHHHHHHhCCC---
Confidence 4689999999755431 10 01111222332 56766633 44789999999998753210
Q ss_pred cCCCcchhhhhHHHHHHHHHHHHHhc---cCCCCCcccHHHHHHHHhccc
Q psy10339 364 EGMPQNDLMERAEEMERMREHVFKEA---DVNRDRLISWEEFLEMTRRQE 410 (476)
Q Consensus 364 e~~~~~e~~e~~eE~~~M~e~mi~Ev---D~DgDG~ISfeEFl~~m~~~~ 410 (476)
. . .+.+....+++.++... ...+.+.++++.|..++.+..
T Consensus 70 -~---~---~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~F~~~l~s~~ 112 (599)
T PLN02952 70 -L---D---CTLAEAQRIVEEVINRRHHVTRYTRHGLNLDDFFHFLLYDD 112 (599)
T ss_pred -c---C---CCHHHHHHHHHHHHhhccccccccccCcCHHHHHHHHcCcc
Confidence 0 0 11223333333333321 222345699999999988653
No 128
>PF07946 DUF1682: Protein of unknown function (DUF1682); InterPro: IPR012879 The members of this family are all hypothetical eukaryotic proteins of unknown function. One member (Q920S6 from SWISSPROT) is described as being an adipocyte-specific protein, but no evidence of this was found.
Probab=37.47 E-value=1.7e+02 Score=30.33 Aligned_cols=81 Identities=23% Similarity=0.306 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccchhHHHHHHHHHHHHHHHH----HHHHHHHH-HHHHHHHHhHHH
Q psy10339 139 ELDRLRELAKRQYELSEGKAVPDAPGHVDHNNPHSFEINDLHKLIVQVTNDLAEA----DRKRRELF-KEYELQKRYERD 213 (476)
Q Consensus 139 e~~rlr~l~~~~~~~~~~~~~~~~~~h~d~~n~~~f~~~dl~~li~~~~~dl~~~----d~~r~~~f-k~yem~k~~e~~ 213 (476)
+++.+..|+..-..+. |.-..=.+..+-++|..+...+-.+++ .+.|.++- .+=+-+|+-+++
T Consensus 229 ~~~~~~~l~~~v~~l~------------D~~~~~~l~~e~~~K~~k~R~~~~~~~~K~~~~~r~E~~~~~k~e~kr~e~~ 296 (321)
T PF07946_consen 229 DMEALEPLLKLVFYLI------------DKLARFKLSPEAKKKAKKNREEEEEKILKEAHQERQEEAQEKKEEKKREERE 296 (321)
T ss_pred cHHHHHHHHHHHHHHH------------HHhheeeeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555542 222223556666777766644444333 33344433 233334566667
Q ss_pred HHhhcCCHHHHHHHHHHH
Q psy10339 214 QKLSLMTDQEKEEFLKKE 231 (476)
Q Consensus 214 ~~~~~l~eeer~e~~~~~ 231 (476)
++++.||+++.+++++.-
T Consensus 297 ~~~~~lspeeQrK~eeKe 314 (321)
T PF07946_consen 297 RKLSKLSPEEQRKYEEKE 314 (321)
T ss_pred HHHhcCCHHHHHHHHHHH
Confidence 779999999888887743
No 129
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=36.72 E-value=31 Score=33.35 Aligned_cols=72 Identities=10% Similarity=0.124 Sum_probs=44.0
Q ss_pred CCCCCCCHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccc
Q psy10339 266 MGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVW 345 (476)
Q Consensus 266 l~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~I 345 (476)
+.|+.| .++|+.++..+.+.+|..|+..++.... ...++-+ .. ...-.|..++.+. .| .||.+
T Consensus 93 Fvp~kF--e~iF~kya~~~~d~LT~~E~~~m~~~nr----~~~D~~G-W~----a~~~EW~~~y~L~-~d-----~dG~l 155 (174)
T PF05042_consen 93 FVPQKF--EEIFSKYAKTGPDALTLRELWRMLKGNR----NANDPFG-WF----AAFFEWGALYILA-KD-----KDGFL 155 (174)
T ss_pred CCHHHH--HHHHHHhCCCCCCCcCHHHHHHHHHhcc----ccCCcch-hh----hhhhHHHHHHHHH-cC-----cCCcE
Confidence 344455 7889999999999999999998875311 0111111 00 0000133344443 34 66999
Q ss_pred cHHHHHHHH
Q psy10339 346 DEEEVKMLF 354 (476)
Q Consensus 346 S~eEL~~~~ 354 (476)
+++.++.+.
T Consensus 156 ~Ke~iR~vY 164 (174)
T PF05042_consen 156 SKEDIRGVY 164 (174)
T ss_pred eHHHHhhhc
Confidence 999999875
No 130
>KOG4347|consensus
Probab=36.44 E-value=28 Score=39.69 Aligned_cols=56 Identities=16% Similarity=0.087 Sum_probs=40.3
Q ss_pred HHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCccccHHHH
Q psy10339 273 PKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350 (476)
Q Consensus 273 pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS~eEL 350 (476)
...+|..+|.+++|.||+.+|..++..- . .++. .+-.+-+|+.+|.+ ++ ..+.++.
T Consensus 557 ~~rlF~l~D~s~~g~Ltf~~lv~gL~~l----~-~~~~-----------~ek~~l~y~lh~~p-----~~-~~d~e~~ 612 (671)
T KOG4347|consen 557 LERLFRLLDDSMTGLLTFKDLVSGLSIL----K-AGDA-----------LEKLKLLYKLHDPP-----AD-ELDREEV 612 (671)
T ss_pred HHHHHHhcccCCcceeEHHHHHHHHHHH----H-hhhH-----------HHHHHHHHhhccCC-----cc-ccccccc
Confidence 5789999999999999999998877421 1 1111 12234589999999 77 6666665
No 131
>KOG2891|consensus
Probab=34.73 E-value=3.2e+02 Score=28.70 Aligned_cols=40 Identities=25% Similarity=0.434 Sum_probs=25.6
Q ss_pred hhhHHHhhhhchhh------hhhhhHHHHHHHHHHHHHHHHHHHHh
Q psy10339 115 GKIAQELEYVNHQV------RSKLDELKRTELDRLRELAKRQYELS 154 (476)
Q Consensus 115 gk~~~~l~~v~~~v------r~~ldelkr~e~~rlr~l~~~~~~~~ 154 (476)
-||-+++|.-..|. +.+|...+.+||++++.--++..+-+
T Consensus 305 ~kikqe~ddkdk~~ed~e~kkrqlerqekqeleqmaeeekkr~eea 350 (445)
T KOG2891|consen 305 CKIKQEFDDKDKHLEDAEIKKRQLERQEKQELEQMAEEEKKREEEA 350 (445)
T ss_pred hchhhhcCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35777777544443 34566667778888887776666543
No 132
>PF05777 Acp26Ab: Drosophila accessory gland-specific peptide 26Ab (Acp26Ab); InterPro: IPR008392 This family consists of accessory gland-specific 26Ab peptides or male accessory gland secretory protein 355B from different Drosophila species. Drosophila males, like males of most other insects, transfer a group of specific proteins (Acp26Ab and Acp26Aa in Drosophila) to the females during mating. These proteins are produced primarily in the accessory gland and are likely to influence the female's reproduction [].; GO: 0007617 mating behavior, 0005576 extracellular region
Probab=34.19 E-value=30 Score=29.57 Aligned_cols=24 Identities=29% Similarity=0.373 Sum_probs=20.7
Q ss_pred hhhHHHHHHHHHHHHHHhhhccCC
Q psy10339 12 MTLKLFYLTLCIIYLHQFINALPV 35 (476)
Q Consensus 12 ~~~~~~~~~l~~~~~~~~~~~~pv 35 (476)
|.+..++|.+.++|+|+...|.|-
T Consensus 1 mnyf~~l~if~cicl~~~sdAaP~ 24 (90)
T PF05777_consen 1 MNYFVVLCIFSCICLWQFSDAAPY 24 (90)
T ss_pred CcchhhHHHHHHHHHHHhccCCce
Confidence 567788899999999999999984
No 133
>cd07627 BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Vps5p. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. Vsp5p is the yeast counterpart of human SNX1 and is part of the retromer complex, which functions in the endosome-to-Golgi retrieval of vacuolar protein sorting receptor Vps10p, the Golgi-resident membrane protein A-ALP, and endopeptidase Kex2. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in
Probab=32.20 E-value=4.8e+02 Score=25.32 Aligned_cols=48 Identities=6% Similarity=0.232 Sum_probs=37.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCHH
Q psy10339 175 EINDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQ 222 (476)
Q Consensus 175 ~~~dl~~li~~~~~dl~~~d~~r~~~fk~yem~k~~e~~~~~~~l~ee 222 (476)
++..+..-+..+.+..+.....=++|+.+|+..|-.+.+.-+..+-+-
T Consensus 151 ei~~~e~~~~~a~~~~e~is~~~k~El~rF~~~r~~dfk~~l~~~~e~ 198 (216)
T cd07627 151 ELEEAERRASELKKEFEEVSELIKSELERFERERVEDFRNSVEIYLES 198 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677788888888888888888888888888887777776666654443
No 134
>cd04762 HTH_MerR-trunc Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins. Proteins in this family mostly have a truncated helix-turn-helix (HTH) MerR-like domain. They lack a portion of the C-terminal region, called Wing 2 and the long dimerization helix that is typically present in MerR-like proteins. These truncated domains are found in response regulator receiver (REC) domain proteins (i.e., CheY), cytosine-C5 specific DNA methylases, IS607 transposase-like proteins, and RacA, a bacterial protein that anchors chromosomes to cell poles.
Probab=32.11 E-value=52 Score=22.96 Aligned_cols=29 Identities=24% Similarity=0.374 Sum_probs=22.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCCC
Q psy10339 426 YSQAEVEAYERQRQAEVDRLVREGKIPSI 454 (476)
Q Consensus 426 is~~EL~~~~~~l~eE~~~mi~~~~~~~~ 454 (476)
+|..|+++...--..-+.++++.|.+|+.
T Consensus 1 ~s~~e~a~~lgvs~~tl~~~~~~g~~~~~ 29 (49)
T cd04762 1 LTTKEAAELLGVSPSTLRRWVKEGKLKAI 29 (49)
T ss_pred CCHHHHHHHHCcCHHHHHHHHHcCCCCce
Confidence 45667777665556889999999999864
No 135
>KOG0042|consensus
Probab=32.08 E-value=85 Score=35.71 Aligned_cols=90 Identities=13% Similarity=0.016 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHhHHHHHhh---cCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHhcC-CCCCCCCCH
Q psy10339 198 RELFKEYELQKRYERDQKLS---LMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQD-HMGNTEFNP 273 (476)
Q Consensus 198 ~~~fk~yem~k~~e~~~~~~---~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev~~~~~-Gl~~~~f~p 273 (476)
...|..++|-.--++--.++ .|++++-..+...|..++.+++++. +.+.+..++++.- +.+. --.
T Consensus 563 ar~fl~~~mg~~~~~~~~~~~~i~~~~~~~~~~~~rf~~lD~~k~~~~---------~i~~v~~vlk~~~~~~d~--~~~ 631 (680)
T KOG0042|consen 563 ARTFLNSEMGLSKESTSQMSIPIKLTPEDFLRRKTRFAFLDADKKAYQ---------AIADVLKVLKSENVGWDE--DRL 631 (680)
T ss_pred HHHhhhhhhhhhhhhccccccccccCHHHHHHHHHHHHhhcchHHHHH---------HHHHHHHHHHHhcCCCCH--HHH
Confidence 34688899973333333333 3899999999999999999888666 6788888888863 3433 334
Q ss_pred HhhhhhccCCCCCcccHHHHHHHHH
Q psy10339 274 KAFFAMHDLDGNHVWDEEEVKMLFL 298 (476)
Q Consensus 274 k~~F~l~D~DgDG~Id~eEf~alm~ 298 (476)
.......|.+-+|.+...||..++.
T Consensus 632 ~~~l~ea~~~~~g~v~l~e~~q~~s 656 (680)
T KOG0042|consen 632 HEELQEADENLNGFVELREFLQLMS 656 (680)
T ss_pred HHHHHHHHHhhcceeeHHHHHHHHH
Confidence 7788888999999999999988774
No 136
>TIGR03798 ocin_TIGR03798 bacteriocin propeptide, TIGR03798 family. This model describes a conserved, fairly long (about 65 residue) propeptide region for a family of putative microcins, that is, bacteriocins of small size. Members of the seed alignment tend to have the Gly-Gly motif as the last two residues of the matched region. This is a cleavage site for a combination processing/export ABC transporter with a peptidase domain.
Probab=32.00 E-value=50 Score=26.20 Aligned_cols=26 Identities=35% Similarity=0.639 Sum_probs=20.3
Q ss_pred HHHHHHHHhhChHHHHHHhhcC-hHHh
Q psy10339 87 LNEVVEALESDPEFRKKLENAS-EADI 112 (476)
Q Consensus 87 l~evi~~Le~dp~frekl~~a~-~~di 112 (476)
|+.-++.+.+||.||++|+++. .+++
T Consensus 4 l~~Fl~~~~~d~~L~~~l~~~~~~e~~ 30 (64)
T TIGR03798 4 LKAFLEKVKTDPDLREKLKAAEDPEDR 30 (64)
T ss_pred HHHHHHHHHcCHHHHHHHHHcCCHHHH
Confidence 5566778889999999999954 4554
No 137
>PF06518 DUF1104: Protein of unknown function (DUF1104); InterPro: IPR009488 This family consists of several hypothetical proteins of unknown function which appear to be found exclusively in Helicobacter pylori.; PDB: 2XRH_A.
Probab=31.66 E-value=1.4e+02 Score=25.99 Aligned_cols=48 Identities=25% Similarity=0.390 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhHHHHHhhcCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHHH
Q psy10339 199 ELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEV 259 (476)
Q Consensus 199 ~~fk~yem~k~~e~~~~~~~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~ev 259 (476)
++|-.|.| |-.+++..|++++++.|.+.|.+.-.+.-... |..+....
T Consensus 21 k~~~dy~~----Ei~KR~~~m~~~~~k~f~~~~~~~~~kn~~~m---------s~~e~~k~ 68 (93)
T PF06518_consen 21 KDVPDYKM----EIHKRLKKMKEKEAKDFKKQFKEAARKNLSKM---------SVEERKKR 68 (93)
T ss_dssp GGHHHHHH----HHHHHHHHS-HHHHHHHHHHHHHHHHHHHTTS----------HHHHHHH
T ss_pred HHHHHHHH----HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC---------CHHHHHHH
Confidence 34555644 56788999999999999999998877766555 66666543
No 138
>PF06991 Prp19_bind: Splicing factor, Prp19-binding domain; InterPro: IPR009730 This entry represents the C terminus (approximately 300 residues) of eukaryotic micro-fibrillar-associated protein 1, which is a component of elastin-associated microfibrils in the extracellular matrix [].
Probab=28.85 E-value=6.7e+02 Score=25.93 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=25.2
Q ss_pred HHHHHHHhHHHHHhhcCCHHHHHHHHHHHHHH
Q psy10339 203 EYELQKRYERDQKLSLMTDQEKEEFLKKEAEE 234 (476)
Q Consensus 203 ~yem~k~~e~~~~~~~l~eeer~e~~~~~~e~ 234 (476)
+-.+.++.++-++...||+++|.+......+.
T Consensus 135 ~e~~EkEkeEiERrR~mteEEr~~ed~~~~k~ 166 (276)
T PF06991_consen 135 REAREKEKEEIERRRNMTEEERRAEDRENPKQ 166 (276)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHhhhhh
Confidence 44667888889999999999999877655433
No 139
>KOG0169|consensus
Probab=28.33 E-value=4.1e+02 Score=31.19 Aligned_cols=120 Identities=18% Similarity=0.222 Sum_probs=61.9
Q ss_pred HhhhhhccCCCCCcccHHHHHHHHHH---HH-----HHHhccCCC--hhhH--hHHH--HHHHHHHHHHHHHhccCCCCC
Q psy10339 274 KAFFAMHDLDGNHVWDEEEVKMLFLK---EL-----DKMYKEGMP--QNDL--MERA--EEMERMREHVFKEADVNRDHL 339 (476)
Q Consensus 274 k~~F~l~D~DgDG~Id~eEf~alm~k---eL-----~k~~~~~d~--e~d~--~e~~--~~~~e~re~~Fk~fD~D~dg~ 339 (476)
..+|...|+|.+|.+++.+...++.. ++ ...+...+. .+.+ ..+. ......+-.++..|..- +
T Consensus 139 ~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rpev~~~f~~~---s 215 (746)
T KOG0169|consen 139 HSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRPEVYFLFVQY---S 215 (746)
T ss_pred HHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCchHHHHHHHH---h
Confidence 45799999999999999998776642 11 111111100 0000 0000 00000011233333222 1
Q ss_pred CCCccccHHHHHHHHHHHHHHhhhcCCCcchhhhhHHHHHHHHHHHHHhc----cCCCCCcccHHHHHHHHhccc
Q psy10339 340 DGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEA----DVNRDRLISWEEFLEMTRRQE 410 (476)
Q Consensus 340 ~GDG~IS~eEL~~~~~~el~kl~~e~~~~~e~~e~~eE~~~M~e~mi~Ev----D~DgDG~ISfeEFl~~m~~~~ 410 (476)
.+.+++|..+|..++..+-+ +... +.+.. +.+|+.+ ..-..+.++++-|..++.+..
T Consensus 216 ~~~~~ls~~~L~~Fl~~~q~----e~~~------~~~~a----e~ii~~~e~~k~~~~~~~l~ldgF~~yL~S~~ 276 (746)
T KOG0169|consen 216 HGKEYLSTDDLLRFLEEEQG----EDGA------TLDEA----EEIIERYEPSKEFRRHGLLSLDGFTRYLFSPD 276 (746)
T ss_pred CCCCccCHHHHHHHHHHhcc----cccc------cHHHH----HHHHHHhhhhhhccccceecHHHHHHHhcCcc
Confidence 16789999999998865321 1111 11122 2233333 244567799999999887754
No 140
>PRK10455 periplasmic protein; Reviewed
Probab=27.78 E-value=2e+02 Score=27.25 Aligned_cols=57 Identities=11% Similarity=0.228 Sum_probs=33.8
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCHHHHHHHHHHHHHHHHh
Q psy10339 170 NPHSFEINDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRK 237 (476)
Q Consensus 170 n~~~f~~~dl~~li~~~~~dl~~~d~~r~~~fk~yem~k~~e~~~~~~~l~eeer~e~~~~~~e~~~~ 237 (476)
...+|+..-++.+|.+... ....|- . ++.+ . +-+-|.-||+|||+.|.+.|.+-..+
T Consensus 92 ~ad~FDeaavra~~~k~~~----~~~~~~---~--~~~~-~-~~qiy~vLTPEQr~q~~~~~ekr~~~ 148 (161)
T PRK10455 92 ASDTFDKAKAEAQITKMEA----QRKARM---L--AHME-T-QNKIYNVLTPEQKKQFNANFEKRLTE 148 (161)
T ss_pred ccCccCHHHHHHHHHHHHH----HHHHHH---H--HHHH-H-HHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 4557887777777776542 211111 1 1211 1 33446679999999999988654433
No 141
>KOG4666|consensus
Probab=27.50 E-value=83 Score=33.57 Aligned_cols=68 Identities=7% Similarity=0.059 Sum_probs=46.5
Q ss_pred CCCCCCHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHhccCCChhhHhHHHHHHHHHHHHHHHHhccCCCCCCCCcccc
Q psy10339 267 GNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWD 346 (476)
Q Consensus 267 ~~~~f~pk~~F~l~D~DgDG~Id~eEf~alm~keL~k~~~~~d~e~d~~e~~~~~~e~re~~Fk~fD~D~dg~~GDG~IS 346 (476)
..+..-++-.|++|+.+-||.+...+|.-+++. +. +-+.-.+. -+|+..+.. .+|+|+
T Consensus 292 ~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~----~l--gv~~l~v~-----------~lf~~i~q~-----d~~ki~ 349 (412)
T KOG4666|consen 292 PVTPVIIQYAFKRFSVAEDGISGEHILSLILQV----VL--GVEVLRVP-----------VLFPSIEQK-----DDPKIY 349 (412)
T ss_pred CCcHHHHHHHHHhcccccccccchHHHHHHHHH----hc--Ccceeecc-----------ccchhhhcc-----cCccee
Confidence 333344588999999999999999888765531 11 11111111 367777777 899999
Q ss_pred HHHHHHHHHH
Q psy10339 347 EEEVKMLFLK 356 (476)
Q Consensus 347 ~eEL~~~~~~ 356 (476)
.++++.++..
T Consensus 350 ~~~f~~fa~~ 359 (412)
T KOG4666|consen 350 ASNFRKFAAT 359 (412)
T ss_pred HHHHHHHHHh
Confidence 9999998753
No 142
>PF11815 DUF3336: Domain of unknown function (DUF3336); InterPro: IPR021771 This family of proteins is characterised by an N-terminal domain that is found adjacent to the patatin/phospholipase A2-related domain (see PF01734 from PFAM). The family of proteins, which contain these two domains, have been characterised in Saccharomyces cerevisiae (Baker's yeast) as a bifunctional enzyme with triacylglycerol lipase and lysophosphatidic acid acyltransferase or lysophosphatidylethanolamine acyltransferase activity. They are generally involved in triacylglycerol mobilisation and localized to lipid particles [, ].
Probab=26.42 E-value=1.1e+02 Score=28.22 Aligned_cols=61 Identities=20% Similarity=0.279 Sum_probs=48.8
Q ss_pred cccHHHHHHHHhcccC-CCCCCCcccCCCCCCCHHHHHHHHHHHH--------HHHHHHHHcCCCCCCCC
Q psy10339 396 LISWEEFLEMTRRQEF-NQDPGWKPIDQEQVYSQAEVEAYERQRQ--------AEVDRLVREGKIPSIPP 456 (476)
Q Consensus 396 ~ISfeEFl~~m~~~~~-~~~~~w~~~d~~g~is~~EL~~~~~~l~--------eE~~~mi~~~~~~~~~~ 456 (476)
.-||+||......-+. ...+.|+..+....|+..-++.....|. ..+..+++.|.....++
T Consensus 23 A~sYeEW~~~A~~LD~l~G~~~Wk~~~~s~~YD~~lI~~rl~~L~~aR~~~d~~~l~~~Lr~~l~RNlgg 92 (145)
T PF11815_consen 23 AESYEEWKEAAQELDELEGNDAWKEDDESDYYDYRLIRERLRELREARQSGDIEALMFLLRTGLHRNLGG 92 (145)
T ss_pred CCCHHHHHHHHHHHHHHcCcchhhcCCCCcccCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccc
Confidence 4699999988776543 2247999999999999999999887763 78888999998876655
No 143
>cd04761 HTH_MerR-SF Helix-Turn-Helix DNA binding domain of transcription regulators from the MerR superfamily. Helix-turn-helix (HTH) transcription regulator MerR superfamily, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.
Probab=26.04 E-value=1e+02 Score=22.03 Aligned_cols=28 Identities=14% Similarity=0.226 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCC
Q psy10339 426 YSQAEVEAYERQRQAEVDRLVREGKIPS 453 (476)
Q Consensus 426 is~~EL~~~~~~l~eE~~~mi~~~~~~~ 453 (476)
+|..|+++...--..-+++.+++|.|||
T Consensus 1 ~~~~e~a~~~gv~~~tlr~~~~~g~l~~ 28 (49)
T cd04761 1 YTIGELAKLTGVSPSTLRYYERIGLLSP 28 (49)
T ss_pred CcHHHHHHHHCcCHHHHHHHHHCCCCCC
Confidence 3555666655444578899999999984
No 144
>smart00422 HTH_MERR helix_turn_helix, mercury resistance.
Probab=25.68 E-value=92 Score=24.02 Aligned_cols=28 Identities=18% Similarity=0.172 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCCC
Q psy10339 427 SQAEVEAYERQRQAEVDRLVREGKIPSI 454 (476)
Q Consensus 427 s~~EL~~~~~~l~eE~~~mi~~~~~~~~ 454 (476)
|..|+.+...--..-++..+++|.|||.
T Consensus 2 s~~eva~~~gvs~~tlr~~~~~gli~~~ 29 (70)
T smart00422 2 TIGEVAKLAGVSVRTLRYYERIGLLPPP 29 (70)
T ss_pred CHHHHHHHHCcCHHHHHHHHHCCCCCCC
Confidence 4455555444334777888889998864
No 145
>PF08838 DUF1811: Protein of unknown function (DUF1811); InterPro: IPR014938 This entry consists uncharacterised bacterial proteins. Some of the proteins are annotated as being transcriptional regulators (see Q4MQL7 from SWISSPROT, Q65MA2 from SWISSPROT). The structure of one of the proteins has revealed a beta-barrel like structure with helix-turn-helix like motif. ; PDB: 2YXY_A 1SF9_A.
Probab=24.63 E-value=1.1e+02 Score=27.25 Aligned_cols=58 Identities=16% Similarity=0.358 Sum_probs=37.1
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCHHHHHH-----HHHhcCCCCCCCCCHHhhhhhc
Q psy10339 214 QKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEE-----VWQEQDHMGNTEFNPKAFFAMH 280 (476)
Q Consensus 214 ~~~~~l~eeer~e~~~~~~e~~~~~~~~~~h~~~~hpGs~~qL~e-----v~~~~~Gl~~~~f~pk~~F~l~ 280 (476)
++|+.||+++-++....+.+..+|.. +. |-..++.- ++.++-=++++.|.|...+...
T Consensus 2 krySeMs~~EL~~Ei~~L~ekarKAE-q~--------G~~nE~aV~erK~~mAksYl~dp~~f~~G~~Y~i~ 64 (102)
T PF08838_consen 2 KRYSEMSEEELRQEIARLKEKARKAE-QL--------GIVNEYAVYERKIIMAKSYLLDPSDFRPGEIYRIE 64 (102)
T ss_dssp HHHHC--HHHHHHHHHHHHHHHHHHH-HC--------T-HHHHHHHHHHHHHHHHCCS-GGGS-TT-EEEET
T ss_pred cchhhcCHHHHHHHHHHHHHHHHHHH-Hc--------CCccHHHHHHHHHHHHHHHhCChhhccCCCEEEec
Confidence 67999999999988888887776655 22 66777642 2333345788899888888876
No 146
>PHA01632 hypothetical protein
Probab=22.98 E-value=1.2e+02 Score=24.38 Aligned_cols=28 Identities=18% Similarity=0.256 Sum_probs=24.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcCCC
Q psy10339 424 QVYSQAEVEAYERQRQAEVDRLVREGKI 451 (476)
Q Consensus 424 g~is~~EL~~~~~~l~eE~~~mi~~~~~ 451 (476)
..=|++||+.++-.+-..--.||.+|++
T Consensus 26 ~kpteeelrkvlpkilkdyanmie~gk~ 53 (64)
T PHA01632 26 QKPTEEELRKVLPKILKDYANMIENGKI 53 (64)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcCce
Confidence 4568999999999988899999999985
No 147
>PRK00753 psbL photosystem II reaction center L; Provisional
Probab=22.92 E-value=1e+02 Score=22.82 Aligned_cols=27 Identities=19% Similarity=0.442 Sum_probs=12.7
Q ss_pred CCCCCcchhhhhHHHHHHHHHHHHHHh
Q psy10339 3 PNIGNTATSMTLKLFYLTLCIIYLHQF 29 (476)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~ 29 (476)
||-.+.+--+.+.-.|++|+++..+++
T Consensus 5 ~NpN~q~VELNRTSLy~GlLlifvl~v 31 (39)
T PRK00753 5 PNPNKQPVELNRTSLYLGLLLVFVLGI 31 (39)
T ss_pred CCCCCCCceechhhHHHHHHHHHHHHH
Confidence 444444444444444555555544443
No 148
>PF10925 DUF2680: Protein of unknown function (DUF2680); InterPro: IPR024485 Members in this family of proteins are annotated as YckD however currently no function is known.
Probab=21.74 E-value=1.8e+02 Score=23.16 Aligned_cols=31 Identities=16% Similarity=0.374 Sum_probs=26.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q psy10339 422 QEQVYSQAEVEAYERQRQAEVDRLVREGKIP 452 (476)
Q Consensus 422 ~~g~is~~EL~~~~~~l~eE~~~mi~~~~~~ 452 (476)
.+|.||.+.=..+..++.+=...|...|.+|
T Consensus 29 e~G~iTqeqAd~ik~~id~~~~~~~qnGf~p 59 (59)
T PF10925_consen 29 EAGVITQEQADAIKKHIDQRQEYMQQNGFVP 59 (59)
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3599999998888888888888888899988
No 149
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=21.19 E-value=87 Score=25.06 Aligned_cols=22 Identities=32% Similarity=0.489 Sum_probs=19.6
Q ss_pred HHHHHHHHhhChHHHHHHhhcC
Q psy10339 87 LNEVVEALESDPEFRKKLENAS 108 (476)
Q Consensus 87 l~evi~~Le~dp~frekl~~a~ 108 (476)
+|++|+.|...|+.-+||++-+
T Consensus 2 ~Q~iV~YLv~nPevl~kl~~g~ 23 (57)
T PF05952_consen 2 KQEIVNYLVQNPEVLEKLKEGE 23 (57)
T ss_pred hHHHHHHHHHChHHHHHHHcCC
Confidence 5899999999999999998833
No 150
>PF14217 DUF4327: Domain of unknown function (DUF4327)
Probab=21.02 E-value=96 Score=25.71 Aligned_cols=24 Identities=29% Similarity=0.454 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCccc
Q psy10339 436 RQRQAEVDRLVREGKIPSIPPQYA 459 (476)
Q Consensus 436 ~~l~eE~~~mi~~~~~~~~~~~~~ 459 (476)
..+++|+++||.+|.|-++-|-|.
T Consensus 5 ~~iq~ear~LV~~g~v~r~qpI~~ 28 (68)
T PF14217_consen 5 DKIQDEARSLVESGVVSRQQPIYT 28 (68)
T ss_pred HHHHHHHHHHHHcCCCCccCcHHH
Confidence 457899999999999999988653
No 151
>cd06395 PB1_Map2k5 PB1 domain is essential part of the mitogen-activated protein kinase kinase 5 (Map2k5, alias MEK5) one of the key member of the signaling kinases cascade which involved in angiogenesis and early cardiovascular development. The PB1 domain of Map2k5 interacts with the PB1 domain of another members of kinase cascade MEKK2 (or MEKK3). A canonical PB1-PB1 interaction, involving heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The Map2k5 protein contains a type I PB1 domain.
Probab=20.71 E-value=4.2e+02 Score=22.95 Aligned_cols=63 Identities=13% Similarity=0.118 Sum_probs=43.3
Q ss_pred cccHHHHHHHHhccc-CCCCCCCcccCCCC----CCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcc
Q psy10339 396 LISWEEFLEMTRRQE-FNQDPGWKPIDQEQ----VYSQAEVEAYERQRQAEVDRLVREGKIPSIPPQY 458 (476)
Q Consensus 396 ~ISfeEFl~~m~~~~-~~~~~~w~~~d~~g----~is~~EL~~~~~~l~eE~~~mi~~~~~~~~~~~~ 458 (476)
.++|.+-+..+..-. .+...+|+--|.+| +=|.+|+++++.-.-.-+..+-..|.+|++-+-|
T Consensus 22 ~L~F~DvL~~I~~vlp~aT~tAFeYEDE~gDRITVRSDeEm~AMlsyy~~~~~E~~~~g~~~~PL~Iy 89 (91)
T cd06395 22 QLLFRDVLDVIGQVLPEATTTAFEYEDEDGDRITVRSDEEMKAMLSYYCSTVMEQQVNGQLIEPLQIF 89 (91)
T ss_pred cccHHHHHHHHHHhcccccccceeeccccCCeeEecchHHHHHHHHHHHHHHHHHHhccCCCCCccCC
Confidence 588998888777643 33346777666665 4689999999987665555566677766554434
No 152
>CHL00038 psbL photosystem II protein L
Probab=20.71 E-value=1.3e+02 Score=22.19 Aligned_cols=23 Identities=13% Similarity=0.320 Sum_probs=9.8
Q ss_pred CcchhhhhHHHHHHHHHHHHHHh
Q psy10339 7 NTATSMTLKLFYLTLCIIYLHQF 29 (476)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~~~ 29 (476)
+.+--+.+--.|++||++..+++
T Consensus 8 ~q~VELNRTSLy~GLLlifvl~v 30 (38)
T CHL00038 8 KQNVELNRTSLYWGLLLIFVLAV 30 (38)
T ss_pred CCccchhhhhHHHHHHHHHHHHH
Confidence 33333344444555544444443
Done!