RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10339
(476 letters)
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 98.5 bits (245), Expect = 4e-25
Identities = 40/86 (46%), Positives = 56/86 (65%)
Query: 254 KQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQND 313
L+EVW+E D + FNPK FF +HD++ + V DE+E++ LF KEL+K+Y ++D
Sbjct: 3 HMLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDD 62
Query: 314 LMERAEEMERMREHVFKEADVNRDHL 339
+ E EE RMREHV K D N+D L
Sbjct: 63 MREMEEERLRMREHVMKNVDTNQDRL 88
Score = 81.9 bits (202), Expect = 3e-19
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 312 NDLMERAEEMERMREHVFKEADVNRDH-LDGNHVWDEEEVKMLFLKELDKMYKEGMPQND 370
+ L E EE++ + + F H ++ + V DE+E++ LF KEL+K+Y ++D
Sbjct: 3 HMLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDD 62
Query: 371 LMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEF 411
+ E EE RMREHV K D N+DRL++ EEFL T+R+EF
Sbjct: 63 MREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRKEF 103
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 56.0 bits (134), Expect = 2e-08
Identities = 54/382 (14%), Positives = 122/382 (31%), Gaps = 113/382 (29%)
Query: 19 LTLCIIYLHQFINALPVQQKQPSPQRFADEEFDKMTANESINEINNNEHHEGGNGNMAEE 78
+L + YL LP + +P+R + + A + + ++ + N +
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLS------IIAESIRDGLATWDNWKHVNCD---- 353
Query: 79 LGIEYNRYLNEVVEALESDPEFRKKLENAS----EADIRSGKIA---QELEYVNHQVRSK 131
+ + + LE E+RK + S A I + ++ ++ + V
Sbjct: 354 ---KLTTIIESSLNVLEPA-EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSD--VMVV 407
Query: 132 LDELKRTELDRLRELAKRQYELSEGKAVPDAPGHVDHNNPHSFEINDLH-KLIVQVTNDL 190
+++L + L ++ + I ++ +L V++ N+
Sbjct: 408 VNKLHK------YSLVEK------------------QPKESTISIPSIYLELKVKLENEY 443
Query: 191 AEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHP 250
A R + Y + K ++ D + DQ + HH
Sbjct: 444 A----LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI------------------GHHL 481
Query: 251 GSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMP 310
+ + E + T F F D FL++ K+ +
Sbjct: 482 KNIEHPERM---------TLF-RMVFL---DFR-------------FLEQ--KIRHDSTA 513
Query: 311 QNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKML--FLKELD-KMYKEGMP 367
N +++++ + + ++ N E V + FL +++ +
Sbjct: 514 WNASGSILNTLQQLKFY--------KPYICDNDPKYERLVNAILDFLPKIEENLICS--K 563
Query: 368 QNDLMERAEEMERMREHVFKEA 389
DL+ A + E +F+EA
Sbjct: 564 YTDLLRIA--LMAEDEAIFEEA 583
Score = 54.9 bits (131), Expect = 4e-08
Identities = 43/373 (11%), Positives = 109/373 (29%), Gaps = 104/373 (27%)
Query: 189 DLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVH 248
+ E + +++ + + + + + D K K+E + I K +
Sbjct: 10 ETGEHQYQYKDILSVF--EDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL 67
Query: 249 HPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVW----------DEEEVKMLFL 298
+ EE+ Q+ F L N+ + + +++
Sbjct: 68 FWTLLSKQEEMVQK--------------FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113
Query: 299 KELDKMYKEGMPQNDL-MERAEEMERMREHVFK--------------------EADVNRD 337
++ D++Y + + R + ++R+ + + DV
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173
Query: 338 H-----LDGNHVW--------DEEEVKML--FLKELDKMYKEGM-PQNDLMERAEEMERM 381
+ +D W E ++ML L ++D + +++ R ++
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233
Query: 382 REHVFKEADVNRDRLI--------SWEEF------LEMTR------------RQEFNQDP 415
+ K L+ +W F L TR + D
Sbjct: 234 LRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293
Query: 416 GWKPIDQEQVYSQ----AEVEAYERQRQAE---------VDRLVREGKIPSIPPQYAHYG 462
+ ++V S + + R+ + +R+G + + H
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG--LATWDNWKHVN 351
Query: 463 HRRPSRAIQNRLD 475
+ + I++ L+
Sbjct: 352 CDKLTTIIESSLN 364
Score = 53.7 bits (128), Expect = 1e-07
Identities = 66/436 (15%), Positives = 140/436 (32%), Gaps = 89/436 (20%)
Query: 65 NEHHEGGNGNMAEELGIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYV 124
+ HH +M E G +Y +++ E F + D+ +++E E +
Sbjct: 1 HHHHH----HMDFETGEHQYQY-KDILSVFE--DAFVDNFDCKDVQDMPKSILSKE-E-I 51
Query: 125 NHQVRSKLDELKRTELDRLRELAKRQYELSEGKAVPDAPGHVDHNNPHSFEINDLHKLIV 184
+H + SK D + T RL + E + V V N + F ++ +
Sbjct: 52 DHIIMSK-DAVSGT--LRLFWTLLSKQE----EMVQKFVEEVLRIN-YKFLMSPIKTEQR 103
Query: 185 QVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDK 244
Q + +R L+ + ++ +Y ++ + L++ E+R K N+
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYN-------VSRLQPYLKLRQALLELRPAK-NV-- 153
Query: 245 ADVHH--PGSKKQL--EEVWQEQDHMGNTEFNPKAFFAMHDLD-GNHVWDEEEVKML--F 297
+ GS K +V + + K F + L+ N E ++ML
Sbjct: 154 --LIDGVLGSGKTWVALDVCL------SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 298 LKELDKMYKEGM-PQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEV------ 350
L ++D + +++ R ++ + K L +V + +
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265
Query: 351 -KML----------FLKELDKMYKEGMPQNDLMERAEEMERMREHVF------------K 387
K+L FL + + + E + +
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS-----LLLKYLDCRPQDLPR 320
Query: 388 EADVNRDRLIS--WEEFLEMTRRQEFNQDPGWKPIDQEQVYSQAEVEAYERQRQAEVDRL 445
E R +S E + + WK ++ +++ + E + AE ++
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDN-----WKHVNCDKLTTIIES-SLNVLEPAEYRKM 374
Query: 446 VREGKI-PS---IPPQ 457
+ P IP
Sbjct: 375 FDRLSVFPPSAHIPTI 390
Score = 49.1 bits (116), Expect = 3e-06
Identities = 63/396 (15%), Positives = 124/396 (31%), Gaps = 112/396 (28%)
Query: 128 VRSKLDELKRTELDRLREL-AKRQYE-----LSEGKAVPDAPGHVDHNNPHSFEINDLH- 180
++ ++ ++ LR L + YE L V + + +F +L
Sbjct: 223 IKLRIHSIQ----AELRRLLKSKPYENCLLVLLN---VQN-AKAWN-----AF---NLSC 266
Query: 181 KLIV-----QVTNDLAEADRKRRELFKEYELQKRYERDQKLSLM---TDQEKEEFLKKEA 232
K+++ QVT+ L+ A L D+ SL+ D ++ L +E
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISL---DHHSMTLTPDEVKSLLLKYLDCRPQD-LPREV 322
Query: 233 ------------EEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMH 280
E IR + D H K + + + E+ + F
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDN--WKHVNCDKLTTIIESSLNVLEPAEY--RKMF--D 376
Query: 281 DL----DGNHV--------WDE--EEVKMLFLKEL------DKMYKEG-----MPQNDLM 315
L H+ W + + M+ + +L +K KE +L
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK 436
Query: 316 ERAEEM----ERMREH-----VFKEADVNRDHLDG---NHV------WDEEEVKMLFLKE 357
+ E + +H F D+ +LD +H+ + E LF
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV 496
Query: 358 -LD------KMYKEGMPQN---DLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTR 407
LD K+ + N ++ ++++ + ++ + + +FL
Sbjct: 497 FLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE 556
Query: 408 RQEFNQDPGWKPIDQEQVYSQAEVEAY--ERQRQAE 441
K D ++ AE EA E +Q +
Sbjct: 557 ENLICS----KYTDLLRIALMAEDEAIFEEAHKQVQ 588
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 54.7 bits (131), Expect = 5e-08
Identities = 46/280 (16%), Positives = 90/280 (32%), Gaps = 101/280 (36%)
Query: 76 AEELGIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDEL 135
A +L ++N+ L E E +D E + A++ + + L YV+ V +
Sbjct: 30 ASQLQEQFNKILPEPTEGFAADDEP------TTPAEL----VGKFLGYVSSLV----EPS 75
Query: 136 KRTELDRLRELAKRQYELSEGKAVPDAPGHVDHNNPHSF-EINDLHKLIVQVTNDLAEAD 194
K + D++ L ++E + + E ND+H L ++ +
Sbjct: 76 KVGQFDQVLNLCLTEFE-------------------NCYLEGNDIHALAAKLLQENDTTL 116
Query: 195 RKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKK 254
K +EL K Y D++ L + E G+ +
Sbjct: 117 VKTKELIKNY-----ITARIMAKRPFDKKSNSALFRAVGE----------------GNAQ 155
Query: 255 -------QLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKE 307
Q GNT+ ++E L++L + Y
Sbjct: 156 LVAIFGGQ-----------GNTD---------------DYFEE-------LRDLYQTYHV 182
Query: 308 GMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHV--W 345
+ DL++ + E + E + D + G ++ W
Sbjct: 183 LV--GDLIKFSA--ETLSELIRTTLDAEKVFTQGLNILEW 218
Score = 39.6 bits (92), Expect = 0.002
Identities = 46/284 (16%), Positives = 83/284 (29%), Gaps = 108/284 (38%)
Query: 221 DQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAF--FA 278
Q +E+F K E P E + + E K F +
Sbjct: 31 SQLQEQFNKILPE----------------P-----TEGFAADDEPTTPAELVGK-FLGYV 68
Query: 279 MHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQND-------LMERAEEMERMREHVFK- 330
++ + V ++V L L E + Y + ND L++ + + + K
Sbjct: 69 SSLVEPSKVGQFDQVLNLCLTEFENCY---LEGNDIHALAAKLLQENDTTLVKTKELIKN 125
Query: 331 --EADV--NRDHLDGNH------VWDEEEVKM--LF---------LKELDKMYKEGMPQ- 368
A + R D E ++ +F +EL +Y+
Sbjct: 126 YITARIMAKR-PFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLV 184
Query: 369 NDLMERAEEMERMREHVFKEADVNR------DRLISWEEFLEMTRRQEFNQDPGWKPIDQ 422
DL++ + E + E + D + + ++ W LE +P P D+
Sbjct: 185 GDLIKFSA--ETLSELIRTTLDAEKVFTQGLN-ILEW---LE---------NPSNTP-DK 228
Query: 423 EQVY-SQAEVEAYERQRQAEVDRLVREGKIPSIPP----QYAHY 461
+ Y + S P Q AHY
Sbjct: 229 D--YLLSIPI---------------------SCPLIGVIQLAHY 249
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 49.6 bits (118), Expect = 2e-07
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 18/109 (16%)
Query: 243 DKADVHHPGSKKQLEEVWQEQDHM--------------GNTEFNPKAFFAMHDLDGNHVW 288
A PGS + +Q+H+ + + +F MHD DGN++
Sbjct: 26 PAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLL 85
Query: 289 DEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRD 337
D E + ++KE + + +E+ + + V ++ D N D
Sbjct: 86 DGLE----LSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNND 130
Score = 49.2 bits (117), Expect = 2e-07
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 322 ERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERM 381
+ ++ H FK D DGN++ D E + ++KE + + +E+ +
Sbjct: 67 QELQLHYFKMHDY-----DGNNLLDGLE----LSTAITHVHKEEGSEQAPLMSEDELINI 117
Query: 382 REHVFKEADVNRDRLISWEEFLEMTR 407
+ V ++ D N D I + EF + +
Sbjct: 118 IDGVLRDDDKNNDGYIDYAEFAKSLQ 143
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 48.7 bits (116), Expect = 7e-07
Identities = 20/134 (14%), Positives = 51/134 (38%), Gaps = 13/134 (9%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
+ F +D + + V + ++ ++ +K++ ++ E ++ + + + K AD
Sbjct: 16 RVFNTFYDCNHDGVIEWDDFELA-IKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYAD 74
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNR 393
+ + +EE +LK + K L E + + +F D +
Sbjct: 75 E-----NEDEQVTKEE----WLKMWAECVKSVEKGESL---PEWLTKYMNFMFDVNDTSG 122
Query: 394 DRLISWEEFLEMTR 407
D +I E+ +
Sbjct: 123 DNIIDKHEYSTVYM 136
Score = 39.8 bits (93), Expect = 7e-04
Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 319 EEMERMREHVFKE-ADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
+ VF D + + V + ++ ++ +K++ ++ E
Sbjct: 8 DFQRNKILRVFNTFYDC-----NHDGVIEWDDFELA-IKKICNLHSWPTDGKKHNEARAT 61
Query: 378 MERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPG 416
++ + + + K AD N D ++ EE+L+M + + G
Sbjct: 62 LKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKG 100
Score = 30.2 bits (68), Expect = 1.1
Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Query: 376 EEMERMREHVFKE-ADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQEQVYSQAEVEAY 434
+ VF D N D +I W++F ++ W ++ ++A ++
Sbjct: 8 DFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKK--ICNLHSWPTDGKKHNEARATLKLI 65
Query: 435 ERQRQAEVDR 444
+ D
Sbjct: 66 WDGLRKYADE 75
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 46.7 bits (111), Expect = 3e-06
Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 14/135 (10%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
K F D DGN + + + + + + + + ++ + +++ KEA
Sbjct: 10 KKRFDRWDFDGNGALERADFEKE-AQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAG 68
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNR 393
V + EE+ F+ ++ + + + + + + + D N
Sbjct: 69 V-----GSDGSLTEEQ----FI----RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNA 115
Query: 394 DRLISWEEFLEMTRR 408
D I+ +EF
Sbjct: 116 DGQINADEFAAWLTA 130
Score = 43.2 bits (102), Expect = 4e-05
Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 318 AEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
A +R+++ F D DGN + + + + + + + + ++
Sbjct: 3 AIASDRLKK-RFDRWDF-----DGNGALERADFEKE-AQHIAEAFGKDAGAAEVQTLKNA 55
Query: 378 MERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDP 415
+ +++ KEA V D ++ E+F+ +T F Q
Sbjct: 56 FGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGE 93
Score = 32.0 bits (73), Expect = 0.23
Identities = 8/69 (11%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Query: 375 AEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQEQVYSQAEVEAY 434
A +R+++ F D + + + +F + + + G E +
Sbjct: 3 AIASDRLKK-RFDRWDFDGNGALERADFEKEAQH--IAEAFGKDAGAAEVQTLKNAFGGL 59
Query: 435 ERQRQAEVD 443
E
Sbjct: 60 FDYLAKEAG 68
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 45.3 bits (107), Expect = 9e-06
Identities = 22/134 (16%), Positives = 45/134 (33%), Gaps = 13/134 (9%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
F D++ + + + + + ++ K + D +E + AD
Sbjct: 12 FTFDFFLDMNHDGSIQDNDFE-DMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRAD 70
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNR 393
+ + + V EE +L +K DL + +FK DV+
Sbjct: 71 I-----NKDDVVSWEE----YLAMWEKTIATCKSVADL---PAWCQNRIPFLFKGMDVSG 118
Query: 394 DRLISWEEFLEMTR 407
D ++ EEF +
Sbjct: 119 DGIVDLEEFQNYCK 132
Score = 43.4 bits (102), Expect = 4e-05
Identities = 20/141 (14%), Positives = 36/141 (25%), Gaps = 30/141 (21%)
Query: 276 FFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVN 335
D++ + V EE +L +K DL + +FK DV
Sbjct: 65 LKGRADINKDDVVSWEE----YLAMWEKTIATCKSVADL---PAWCQNRIPFLFKGMDV- 116
Query: 336 RDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDR 395
G+ + D EE + + D+ V+
Sbjct: 117 ----SGDGIVDLEEFQNY-------CKNFQLQCADV-----------PAVYNVITDGGKV 154
Query: 396 LISWEEFLEMTRRQEFNQDPG 416
+ E+ R +
Sbjct: 155 TFDLNRYKELYYRLLTSPAAD 175
Score = 37.6 bits (87), Expect = 0.004
Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Query: 319 EEMERMREHVFKE-ADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
+ ++ + F D+ + + + + + + ++ K + D
Sbjct: 4 DFQKQKIKFTFDFFLDM-----NHDGSIQDNDFE-DMMTRYKEVNKGSLSDADYKSMQAS 57
Query: 378 MERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQD 414
+E + AD+N+D ++SWEE+L M +
Sbjct: 58 LEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCK 94
Score = 28.3 bits (63), Expect = 3.4
Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 376 EEMERMREHVFKE-ADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQEQVYSQAEVEAY 434
+ ++ + F D+N D I +F +M R + D + + + E E
Sbjct: 4 DFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWR 63
Query: 435 ERQRQAEVDR 444
+ + +A++++
Sbjct: 64 DLKGRADINK 73
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 45.3 bits (107), Expect = 2e-05
Identities = 37/212 (17%), Positives = 85/212 (40%), Gaps = 30/212 (14%)
Query: 199 ELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEE 258
+ E E+ R + L L+ + + +F KKE + + + N + V +++ +E
Sbjct: 35 SVEDELEMATVRHRPEALELL--EAQSKFTKKELQILYRGFKNECPSGV---VNEETFKE 89
Query: 259 VWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERA 318
++ + G++ F D D N E+ F+K L ++ R
Sbjct: 90 IYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFED----FIKGLS-----------ILLRG 134
Query: 319 EEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEM 378
E++ F D ++ + +EE+ + + +Y + + +
Sbjct: 135 TVQEKLN-WAFNLYD-----INKDGYITKEEMLDI----MKAIYDMMGKCTYPVLKEDAP 184
Query: 379 ERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410
+ E F++ D N+D +++ +EF+E ++ E
Sbjct: 185 RQHVETFFQKMDKNKDGVVTIDEFIESCQKDE 216
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 44.4 bits (105), Expect = 2e-05
Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 24/141 (17%)
Query: 277 FAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEA---- 332
+G + F++ L + E R + A
Sbjct: 67 INAFFSEGEDQVNFRG----FMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLY 122
Query: 333 DVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVN 392
D LD + +E+ + L M + L A+ +EAD +
Sbjct: 123 D-----LDKDDKISRDELLQV----LRMMVGVNISDEQLGSIADRT-------IQEADQD 166
Query: 393 RDRLISWEEFLEMTRRQEFNQ 413
D IS+ EF+++ + + Q
Sbjct: 167 GDSAISFTEFVKVLEKVDVEQ 187
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 44.4 bits (105), Expect = 2e-05
Identities = 33/198 (16%), Positives = 70/198 (35%), Gaps = 23/198 (11%)
Query: 214 QKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNP 273
Q+ S +E +A ++++ + + + ++ D+ T++
Sbjct: 3 QQFSWEEAEENGAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQY-V 61
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
+A F D +G++ D E ++ L+ L+ R +++ FK D
Sbjct: 62 EAMFRAFDTNGDNTIDFLE----YVAALN-----------LVLRGTLEHKLKW-TFKIYD 105
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEM-ERMREHVFKEADVN 392
D N D +E+ + + + E + + +F D N
Sbjct: 106 -----KDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDEN 160
Query: 393 RDRLISWEEFLEMTRRQE 410
D +S EF+E RR +
Sbjct: 161 GDGQLSLNEFVEGARRDK 178
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 44.3 bits (104), Expect = 3e-05
Identities = 37/208 (17%), Positives = 77/208 (37%), Gaps = 30/208 (14%)
Query: 203 EYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQE 262
E EL + + L + Q + +F KKE + + + N + + ++ +
Sbjct: 66 ELELSTVRHQPEGLDQL--QAQTKFTKKELQSLYRGFKNECP---TGLVDEDTFKLIYSQ 120
Query: 263 QDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEME 322
G+ F D DGN E+ F+ L ++ R E
Sbjct: 121 FFPQGDATTYAHFLFNAFDADGNGAIHFED----FVVGLS-----------ILLRGTVHE 165
Query: 323 RMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMR 382
+++ F D ++ + +EE+ + + +Y + R +
Sbjct: 166 KLK-WAFNLYD-----INKDGCITKEEMLAI----MKSIYDMMGRHTYPILREDAPLEHV 215
Query: 383 EHVFKEADVNRDRLISWEEFLEMTRRQE 410
E F++ D N+D +++ +EFLE ++ E
Sbjct: 216 ERFFQKMDRNQDGVVTIDEFLETCQKDE 243
Score = 37.3 bits (86), Expect = 0.007
Identities = 20/144 (13%), Positives = 47/144 (32%), Gaps = 11/144 (7%)
Query: 201 FKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVW 260
F + ELQ Y + +++ F ++ + + + + +
Sbjct: 88 FTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIH 147
Query: 261 QEQ-------DHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQND 313
E G K F ++D++ + +EE+ + + +Y
Sbjct: 148 FEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAI----MKSIYDMMGRHTY 203
Query: 314 LMERAEEMERMREHVFKEADVNRD 337
+ R + E F++ D N+D
Sbjct: 204 PILREDAPLEHVERFFQKMDRNQD 227
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 43.7 bits (103), Expect = 5e-05
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 356 KELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408
+E+ +M + ++ + + +E + + F+EAD D I EE+ + R
Sbjct: 142 QEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR 194
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium
binding, EF-hand superfamily, S genomics, protein
structure initiative, PSI; 2.10A {Danio rerio} PDB:
2q4u_A
Length = 272
Score = 42.7 bits (100), Expect = 1e-04
Identities = 44/235 (18%), Positives = 79/235 (33%), Gaps = 45/235 (19%)
Query: 206 LQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDH 265
L+K +D+ Q K+ F+ R + A++ P + L +E
Sbjct: 41 LKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPL 100
Query: 266 MGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMR 325
+ EF + +D D + E+K FLK+L +K+ +P N L E + M
Sbjct: 101 DNSVEF--MKIWRKYDADSSGYISAAELKN-FLKDLFLQHKKKIPPNKLDEYTDAM---- 153
Query: 326 EHVFKEADVNRD-----------------------HLDGNHVWDEEEVKMLF-------- 354
K D N+D + V + + + +F
Sbjct: 154 ---MKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRT 210
Query: 355 ----LKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
E+D K+ M ++++ RE + D+N+D I E
Sbjct: 211 GALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALC 265
Score = 42.0 bits (98), Expect = 2e-04
Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 18/137 (13%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
K+F + +D + EE + + + + + ++++ D
Sbjct: 60 KSFMSAYDATFDGRLQIEE----LANMILPQEENFLLIFRREAPLDNSVEFMK-IWRKYD 114
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNR 393
D + E+K FLK+L +K+ +P N L E + M K D N+
Sbjct: 115 A-----DSSGYISAAELKN-FLKDLFLQHKKKIPPNKLDEYTDAM-------MKIFDKNK 161
Query: 394 DRLISWEEFLEMTRRQE 410
D + + + QE
Sbjct: 162 DGRLDLNDLARILALQE 178
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 42.1 bits (99), Expect = 1e-04
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 356 KELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410
+EL +M + +++L+ + +E M + F +AD D I +E+ +
Sbjct: 131 EELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNP 185
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 41.3 bits (97), Expect = 2e-04
Identities = 22/129 (17%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
A F D DGN D + K + + + E + + + AD
Sbjct: 7 AARFTTFDQDGNGHIDRSDFSGA-AKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIAD 65
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNR 393
DG+ EE F+ K ++ AE AD +
Sbjct: 66 R-----DGDQRITREE----FVTGAVKRLRDKPD-----RFAEMARPFLHAALGVADTDG 111
Query: 394 DRLISWEEF 402
D ++ +
Sbjct: 112 DGAVTVADT 120
Score = 40.1 bits (94), Expect = 4e-04
Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 7/105 (6%)
Query: 319 EEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEM 378
E R+ F D DGN D + K + + +
Sbjct: 1 EYERRIAA-RFTTFDQ-----DGNGHIDRSDFSGA-AKAMLAEFGVAARSDRGQALYGGA 53
Query: 379 ERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQE 423
E + + + AD + D+ I+ EEF+ ++ ++ + + +
Sbjct: 54 EALWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARP 98
Score = 34.3 bits (79), Expect = 0.033
Identities = 11/69 (15%), Positives = 18/69 (26%), Gaps = 3/69 (4%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQEQVYSQAEVEAYE 435
E R+ F D + + I +F + + G EA
Sbjct: 1 EYERRIAA-RFTTFDQDGNGHIDRSDFSGAAKA--MLAEFGVAARSDRGQALYGGAEALW 57
Query: 436 RQRQAEVDR 444
+ DR
Sbjct: 58 QGLAGIADR 66
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 41.3 bits (97), Expect = 2e-04
Identities = 37/197 (18%), Positives = 72/197 (36%), Gaps = 28/197 (14%)
Query: 214 QKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNP 273
+ L F KKE ++ K + +K + ++++++ G+
Sbjct: 9 SQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGH---LNKSEFQKIYKQFFPFGDPSAFA 65
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
+ F + D D N D +E + R E +++ F+ D
Sbjct: 66 EYVFNVFDADKNGYIDFKEFICAL---------------SVTSRGELNDKLI-WAFQLYD 109
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNR 393
LD N + +E+ + +D +YK L E + E+ +F D N+
Sbjct: 110 -----LDNNGLISYDEMLRI----VDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNK 160
Query: 394 DRLISWEEFLEMTRRQE 410
D ++ EEF E ++R
Sbjct: 161 DGQLTLEEFCEGSKRDP 177
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 41.1 bits (96), Expect = 3e-04
Identities = 30/214 (14%), Positives = 80/214 (37%), Gaps = 30/214 (14%)
Query: 197 RRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQL 256
+ ++ E E+ R + L + + + F K+E + + + N +++
Sbjct: 20 KDKIEDELEMTMVCHRPEGLEQL--EAQTNFTKRELQVLYRGFKNECP---SGVVNEETF 74
Query: 257 EEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLME 316
++++ + G+ F D E+ F+ L ++
Sbjct: 75 KQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFED----FVTALS-----------ILL 119
Query: 317 RAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAE 376
R E++R F D ++ + ++EE+ + + +Y + + +
Sbjct: 120 RGTVHEKLR-WTFNLYD-----INKDGYINKEEMMDI----VKAIYDMMGKYTYPVLKED 169
Query: 377 EMERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410
+ + F++ D N+D +++ +EFLE + +
Sbjct: 170 TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDD 203
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence,
southeast collabora structural genomics, secsg,
structural genomics, PSI; HET: CTZ; 1.72A {Renilla
muelleri} PDB: 2hq8_A
Length = 186
Score = 40.5 bits (95), Expect = 3e-04
Identities = 22/169 (13%), Positives = 40/169 (23%), Gaps = 39/169 (23%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKE-GMPQNDLMERAEEMERMREHVFKEA 332
K D+ G+ E+ + ++ K + E +E R+ +
Sbjct: 17 KTRMQRVDVTGDGFISRED----YELIAVRIAKIAKLSAEKAEETRQEFLRV----ADQL 68
Query: 333 DVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERA--------------EEM 378
+ + EE L +E E
Sbjct: 69 GLAPG----VRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEF 124
Query: 379 ERMR------------EHVFKEADVNRDRLISWEEFLEMTRRQEFNQDP 415
+ F D N++ IS +EFL F +
Sbjct: 125 KAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDFLFGLEE 173
Score = 40.1 bits (94), Expect = 5e-04
Identities = 16/113 (14%), Positives = 31/113 (27%), Gaps = 25/113 (22%)
Query: 309 MPQNDLMERAEEMERMREHVFKEADVNRD-HLDGNHVWDEEEVKMLFLKELDKMYK---- 363
MP+ ERA + +M+ + DV D + ++ + +
Sbjct: 1 MPEITESERAYHLRKMKT-RMQRVDVTGDGFIS--------------REDYELIAVRIAK 45
Query: 364 -EGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDP 415
+ E +E R+ + + IS EE
Sbjct: 46 IAKLSAEKAEETRQEFLRV----ADQLGLAPGVRISVEEAAVNATDSLLKMKG 94
Score = 37.0 bits (86), Expect = 0.005
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 366 MPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQEQV 425
MP+ ERA + +M+ + DV D IS E++ + R + E+
Sbjct: 1 MPEITESERAYHLRKMKT-RMQRVDVTGDGFISREDYELIAVR--IAKIAKLSAEKAEET 57
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 41.0 bits (96), Expect = 3e-04
Identities = 30/204 (14%), Positives = 68/204 (33%), Gaps = 36/204 (17%)
Query: 214 QKLSLMTDQEKEE------FLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMG 267
S ++ + E K+E +R + + S + + +++ +
Sbjct: 26 GSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLP 85
Query: 268 NTEFNPKA---FFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERM 324
+ NP E+ FL L ++
Sbjct: 86 ELKANPFKERICRVFSTSPAKDSLSFED----FLDLLSVF----SDTATPDIKSH----- 132
Query: 325 REHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREH 384
+ F+ D D + + E++ L ++ + EG A EM+++ ++
Sbjct: 133 --YAFRIFD-----FDDDGTLNREDLSRL----VNCLTGEGEDTR---LSASEMKQLIDN 178
Query: 385 VFKEADVNRDRLISWEEFLEMTRR 408
+ +E+D++RD I+ EF + R
Sbjct: 179 ILEESDIDRDGTINLSEFQHVISR 202
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 40.2 bits (94), Expect = 4e-04
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 339 LDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLIS 398
L+ + +E+ + + +YK L E E + +FK D N D I+
Sbjct: 110 LNHDGYITFDEMLTI----VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYIT 165
Query: 399 WEEFLEMTRR 408
+EF E ++
Sbjct: 166 LDEFREGSKV 175
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand,
transport protein; 2.00A {Rattus norvegicus} SCOP:
a.39.1.5 PDB: 2nz0_A 2i2r_E
Length = 183
Score = 40.2 bits (94), Expect = 5e-04
Identities = 11/72 (15%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 339 LDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLIS 398
++ + ++EE+ + +Y + + + + + F++ D N+D +++
Sbjct: 103 INKDGYINKEEMMDIV----KAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVT 158
Query: 399 WEEFLEMTRRQE 410
+EFLE + +
Sbjct: 159 LDEFLESXQEDD 170
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 40.2 bits (94), Expect = 5e-04
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 339 LDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLIS 398
LDGN + E+ + + +YK + E E+ E +F++ D NRD +S
Sbjct: 110 LDGNGYISKAEMLEI----VQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLS 165
Query: 399 WEEFLEMTRRQE 410
EEF+ +
Sbjct: 166 LEEFIRGAKSDP 177
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 39.8 bits (93), Expect = 6e-04
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 339 LDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLIS 398
LD + E+ + +D +Y+ +L E E+ + +F D N D ++
Sbjct: 110 LDNDGYITRNEMLDI----VDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLT 165
Query: 399 WEEFLEMTRR 408
+EF E ++
Sbjct: 166 LQEFQEGSKA 175
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 40.0 bits (93), Expect = 7e-04
Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 53/189 (28%)
Query: 266 MGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLF-------------LKELDKMYKEGMPQN 312
MGN++ + + +L N + EEE+ + ++ +Y + P
Sbjct: 8 MGNSKSGALSKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDT 67
Query: 313 DLMERAEEMERMREHVFKEADVNRDH-------------------------------LDG 341
D + +HVF+ D N D +DG
Sbjct: 68 D-------PKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDG 120
Query: 342 NHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEE 401
N + EV + + + E + E E+ E ++K N D ++ +E
Sbjct: 121 NGTISKNEVLEIVMAIFKMITPEDVKLLPDDE--NTPEKRAEKIWKYFGKNDDDKLTEKE 178
Query: 402 FLEMTRRQE 410
F+E T +
Sbjct: 179 FIEGTLANK 187
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 39.4 bits (91), Expect = 0.001
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 15/78 (19%)
Query: 191 AEADRKRRELFKEYELQKR----YERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKAD 246
E+ RK RE ++ LQ+ +Q+ ++ EE+ ++++E++ K K N AD
Sbjct: 84 PESIRKWREEQRK-RLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIAD 142
Query: 247 VHHPGSKKQLEEVWQEQD 264
+ +Q+ D
Sbjct: 143 ----------KAFYQQPD 150
Score = 30.5 bits (68), Expect = 0.77
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 39/110 (35%)
Query: 228 LKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHV 287
L +E E IRK W+E E + + +LD
Sbjct: 80 LTQEPESIRK----------------------WRE-------EQRKR----LQELDAASK 106
Query: 288 WDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRD 337
E+E + K+L++ + Q++ +E+ + R+ + F + D
Sbjct: 107 VMEQEWREKAKKDLEEWNQR---QSEQVEKNKINNRIADKAFYQ---QPD 150
Score = 28.6 bits (63), Expect = 3.6
Identities = 21/127 (16%), Positives = 43/127 (33%), Gaps = 52/127 (40%)
Query: 316 ERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERA 375
+E E +R+ W EE+ K L +ELD
Sbjct: 79 RLTQEPESIRK------------------WREEQRKRL--QELDA------------ASK 106
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQEQVYSQAEVEAYE 435
+ RE K+ EE+ + R+ E +++ ++ ++ +A+
Sbjct: 107 VMEQEWREKAKKD----------LEEWNQ--RQSE--------QVEKNKINNRIADKAFY 146
Query: 436 RQRQAEV 442
+Q A++
Sbjct: 147 QQPDADI 153
Score = 27.8 bits (61), Expect = 6.7
Identities = 11/81 (13%), Positives = 27/81 (33%), Gaps = 28/81 (34%)
Query: 314 LMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLME 373
L E + M + ++A K+L++ + Q++ +E
Sbjct: 98 LQELDAASKVMEQEWREKAK----------------------KDLEEWNQR---QSEQVE 132
Query: 374 RAEEMERMREHVFKEADVNRD 394
+ + R+ + F + D
Sbjct: 133 KNKINNRIADKAFYQ---QPD 150
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 39.0 bits (91), Expect = 0.001
Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 31/138 (22%)
Query: 296 LFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRD-HLD----------GNHV 344
L L E + + + E +F+ D N+D ++D
Sbjct: 32 LTLYEFKQFFGLKNLSPS-------ANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKG 84
Query: 345 WDEEEVKMLF------------LKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVN 392
+++++ F EL + K + + A E VF + D+N
Sbjct: 85 KVDQKLRWYFKLYDVDGNGCIDRGELLNIIKA-IRAINRCNEAMTAEEFTNMVFDKIDIN 143
Query: 393 RDRLISWEEFLEMTRRQE 410
D +S EEF+E ++ E
Sbjct: 144 GDGELSLEEFMEGVQKDE 161
Score = 29.7 bits (67), Expect = 1.4
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 9/64 (14%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
+ +F ++D+DGN D E+ + + + A E VF + D
Sbjct: 91 RWYFKLYDVDGNGCIDRGELLNI----IKAIRAINRC-----NEAMTAEEFTNMVFDKID 141
Query: 334 VNRD 337
+N D
Sbjct: 142 INGD 145
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 38.6 bits (90), Expect = 0.001
Identities = 29/190 (15%), Positives = 65/190 (34%), Gaps = 30/190 (15%)
Query: 222 QEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKA--FFAM 279
Q+ K+E +R + + S + + +++ + + NP +
Sbjct: 9 QDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRV 68
Query: 280 HDLD-GNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDH 338
E+ FL L ++ F+ D
Sbjct: 69 FSTSPAKDSLSFED----FLDLLSVF----SDTATPDIKSHYA-------FRIFD----- 108
Query: 339 LDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLIS 398
D + + E++ L ++ + EG A EM+++ +++ +E+D++RD I+
Sbjct: 109 FDDDGTLNREDLSRL----VNCLTGEGEDTR---LSASEMKQLIDNILEESDIDRDGTIN 161
Query: 399 WEEFLEMTRR 408
EF + R
Sbjct: 162 LSEFQHVISR 171
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein;
HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB:
1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 37.9 bits (88), Expect = 0.003
Identities = 21/136 (15%), Positives = 40/136 (29%), Gaps = 23/136 (16%)
Query: 281 DLDGNHVWDEEEVKML-FLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHL 339
G + E +++ K+ + + + E +F D
Sbjct: 67 FFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDA-LFDIVD-----K 120
Query: 340 DGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISW 399
D N +E K + K G+ Q+ E EE F+ D++ +
Sbjct: 121 DQNGAITLDEWKA-YTKAA------GIIQSS--EDCEET-------FRVCDIDESGQLDV 164
Query: 400 EEFLEMTRRQEFNQDP 415
+E + DP
Sbjct: 165 DEMTRQHLGFWYTMDP 180
Score = 30.2 bits (68), Expect = 1.2
Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 12/95 (12%)
Query: 315 MERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMER 374
+ + R + +F DV + N +E + + + + E+
Sbjct: 9 FDNPRWIGRHKH-MFNFLDV-----NHNGKISLDE----MVYKASDIVINNLGATP--EQ 56
Query: 375 AEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409
A+ + E F A + W ++E ++
Sbjct: 57 AKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKL 91
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 37.8 bits (88), Expect = 0.003
Identities = 22/141 (15%), Positives = 42/141 (29%), Gaps = 23/141 (16%)
Query: 281 DLDGNHVWDEEEVKML-FLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHL 339
G + +E+ FL ++ + + E E VF D
Sbjct: 71 FFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDA-VFDIFD-----K 124
Query: 340 DGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISW 399
DG+ +E K + K G+ + E+ E F+ D++ +
Sbjct: 125 DGSGTITLDEWKA-YGKIS------GISPSQ-----EDCEAT----FRHCDLDNAGDLDV 168
Query: 400 EEFLEMTRRQEFNQDPGWKPI 420
+E + DP +
Sbjct: 169 DEMTRQHLGFWYTLDPEADGL 189
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated,
SEN membrane targeting, EF-hand, cell projection,
cilium; 2.00A {Trypanosoma cruzi}
Length = 219
Score = 37.6 bits (87), Expect = 0.005
Identities = 22/168 (13%), Positives = 49/168 (29%), Gaps = 44/168 (26%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEM--ERMREHVFKE 331
F D + L E+ E + ++ R ++ +
Sbjct: 51 IELFKKFDKNET--------GKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLG 102
Query: 332 ADVNRD-----------HLDGNHVWDEEEVKMLFLKELDK--------------MYKEGM 366
+ + L +++D E+ ++F E+D + K
Sbjct: 103 SKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMF-DEIDASGNMLVDEEEFKRAVPKLEA 161
Query: 367 PQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQD 414
+ E+ + FKE D N ++++EF + + D
Sbjct: 162 WGAKV----EDPAAL----FKELDKNGTGSVTFDEFAAWASAVKLDAD 201
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 37.1 bits (86), Expect = 0.005
Identities = 19/132 (14%), Positives = 43/132 (32%), Gaps = 28/132 (21%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
+ FF ++ + E+ +++ + + E + + D
Sbjct: 84 RVFFLHKGVEPVNGLLRED----WVEANRVFAEAERERERRGEPSLIALLSNS-YYDVLD 138
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNR 393
DG+ D +E+K +K +PQ E A F++AD ++
Sbjct: 139 D-----DGDGTVDVDELKT-MMKAF------DVPQ----EAAYTF-------FEKADTDK 175
Query: 394 DRLISWEEFLEM 405
+ E + +
Sbjct: 176 SGKLERTELVHL 187
Score = 36.3 bits (84), Expect = 0.011
Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 17/102 (16%)
Query: 319 EEMERMREHVFKEADVNRD-HLDGNHVWDEEEVKMLFLKELDKMYKE-GMPQNDLMERAE 376
+ + R+ + F D++ D ++ + E+ N E+ E
Sbjct: 33 KMLSRLYK-RFDTFDLDSDGKME--------------MDEVLYWPDRMRQLVNATDEQVE 77
Query: 377 EMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWK 418
+M F V + E+++E R + +
Sbjct: 78 KMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERER 119
Score = 34.8 bits (80), Expect = 0.031
Identities = 18/134 (13%), Positives = 38/134 (28%), Gaps = 17/134 (12%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
F DLD + + +EV + N E+ E+M F
Sbjct: 39 YKRFDTFDLDSDGKMEMDEVLYW-------PDRMRQLVNATDEQVEKMRDAVRVFFLHKG 91
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNR 393
V + + E+ +++ + + E + + D +
Sbjct: 92 V-----EPVNGLLRED----WVEANRVFAEAERERERRGEPSLIALLSNS-YYDVLDDDG 141
Query: 394 DRLISWEEFLEMTR 407
D + +E M +
Sbjct: 142 DGTVDVDELKTMMK 155
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding
protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB:
2scp_A
Length = 174
Score = 36.6 bits (85), Expect = 0.006
Identities = 24/159 (15%), Positives = 45/159 (28%), Gaps = 41/159 (25%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
K +F D D + + + + + K + AE + + + + D
Sbjct: 9 KTYFNRIDFDKDGAITRMDFESM-AERFAKESEMK---------AEHAKVLMDSLTGVWD 58
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMER-----------------AE 376
+ G DE F+ + +M K ++ + +
Sbjct: 59 NFLTAVAGGKGIDETT----FINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRD 114
Query: 377 EMERMR----------EHVFKEADVNRDRLISWEEFLEM 405
E F D N D L+S EEF+
Sbjct: 115 EYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIA 153
Score = 33.2 bits (76), Expect = 0.089
Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Query: 375 AEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQEQVYSQAEVEAY 434
+++M+ F D ++D I+ +F M R F ++ K + + +
Sbjct: 2 DLWVQKMKT-YFNRIDFDKDGAITRMDFESMAER--FAKESEMKAEHAKVLM--DSLTGV 56
Query: 435 ERQRQAEVD 443
V
Sbjct: 57 WDNFLTAVA 65
Score = 32.0 bits (73), Expect = 0.23
Identities = 9/97 (9%), Positives = 30/97 (30%), Gaps = 11/97 (11%)
Query: 318 AEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
+++M+ F D D + + + + + K + ++ +
Sbjct: 2 DLWVQKMKT-YFNRIDF-----DKDGAITRMDFESM-AERFAKESEMKAEHAKVLM--DS 52
Query: 378 MERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQD 414
+ + ++ V + I F+ + N +
Sbjct: 53 LTGVWDNFL--TAVAGGKGIDETTFINSMKEMVKNPE 87
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR
{Rattus norvegicus} PDB: 2g9b_A
Length = 263
Score = 37.5 bits (87), Expect = 0.007
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 20/151 (13%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
K F + + E L + ++ + E + +++ D
Sbjct: 61 KTFVDQYGQRDDGKIGIVE----LAHVLPTEENFLLLFR--CQQLKSCEEFMK-TWRKYD 113
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNR 393
D + + EE+K FLK+L + + + L E + M K D N
Sbjct: 114 T-----DHSGFIETEELKN-FLKDLLEKANKTVDDTKLAEYTDLM-------LKLFDSNN 160
Query: 394 DRLISWEEFLEMTRRQEFNQDPGWKPIDQEQ 424
D + E + QE +
Sbjct: 161 DGKLELTEMARLLPVQENFLLKFQGIKMCGK 191
Score = 31.4 bits (71), Expect = 0.60
Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 21/129 (16%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
+ +D D + + EE+K FLK+L + + + L E + M K D
Sbjct: 106 MKTWRKYDTDHSGFIETEELKN-FLKDLLEKANKTVDDTKLAEYTDLM-------LKLFD 157
Query: 334 VNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNR 393
N D L L E+ ++ + + + F+ D +
Sbjct: 158 SNNDG-------------KLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDG 204
Query: 394 DRLISWEEF 402
+ I E
Sbjct: 205 NGYIDENEL 213
Score = 27.5 bits (61), Expect = 8.7
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Query: 356 KELDKMYKE--GMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410
KEL + +E + +E + EM+ + D I E + +E
Sbjct: 36 KELQNLIQELLQARKKAGLELSPEMKTF----VDQYGQRDDGKIGIVELAHVLPTEE 88
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent
kinase, structural genomics, structural GE consortium,
SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 36.5 bits (85), Expect = 0.009
Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 42/160 (26%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
F D +G+ D +E+ ++L + + + D + E++ + + D
Sbjct: 43 TQIFRQLDNNGDGQLDRKELIE-GYRKLMQWKGDTVSDLDSSQIEAEVDHI----LQSVD 97
Query: 334 VNRDH-----------LDGNHVWDEEEVKMLFLKELDK--------------MYKEGMPQ 368
+R+ +D + E + F ++ D +
Sbjct: 98 FDRNGYIEYSEFVTVCMDKQLLLSRERLLAAF-QQFDSDGSGKITNEELGRLFGVTEVDD 156
Query: 369 NDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408
++ +E D N D + +EEF+EM ++
Sbjct: 157 ETW----HQV-------LQECDKNNDGEVDFEEFVEMMQK 185
Score = 33.8 bits (78), Expect = 0.064
Identities = 15/96 (15%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 315 MERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMER 374
+ EE + + + +F++ D +G+ D +E+ ++L + + + D +
Sbjct: 33 LTTLEETKELTQ-IFRQLDN-----NGDGQLDRKELIE-GYRKLMQWKGDTVSDLDSSQI 85
Query: 375 AEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410
E++ + + D +R+ I + EF+ + ++
Sbjct: 86 EAEVDHI----LQSVDFDRNGYIEYSEFVTVCMDKQ 117
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase
activator; 3.00A {Homo sapiens}
Length = 211
Score = 36.3 bits (84), Expect = 0.010
Identities = 23/138 (16%), Positives = 41/138 (29%), Gaps = 32/138 (23%)
Query: 296 LFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRD-HLD----------GNHV 344
L E + + + V+ D N+D +D
Sbjct: 37 QTLHEFKTLLGLQGLNQK-------ANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQE 89
Query: 345 WDEEEVKMLF------------LKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVN 392
E+++K F EL M+ N + E VF + D+N
Sbjct: 90 KMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPE--EFINLVFHKIDIN 147
Query: 393 RDRLISWEEFLEMTRRQE 410
D ++ EEF+ + +
Sbjct: 148 NDGELTLEEFINGMAKDQ 165
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 35.9 bits (83), Expect = 0.015
Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 31/198 (15%)
Query: 222 QEKEEFLKKEAEEIRKRKSNIDKADVHHPG--SKKQLEEVWQEQDHMGNTEFNPKA--FF 277
+ + F + + R +D+ + G S+ L++ +G NP
Sbjct: 18 RRETGFSQASLLRLHHRFRALDR---NKKGYLSRMDLQQ-------IGALAVNPLGDRII 67
Query: 278 AMHDLDGNHVWDEEE-VKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNR 336
DG+ D V++L + E + F+ D
Sbjct: 68 ESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYD--- 124
Query: 337 DHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRL 396
LD + E+ + L M + + L A+ +EAD + D
Sbjct: 125 --LDRDGKISRHEMLQV----LRLMVGVQVTEEQLENIADRT-------VQEADEDGDGA 171
Query: 397 ISWEEFLEMTRRQEFNQD 414
+S+ EF + + + Q
Sbjct: 172 VSFVEFTKSLEKMDVEQK 189
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural
genomics, protein structure initiative; NMR {Arabidopsis
thaliana} SCOP: a.39.1.5
Length = 67
Score = 33.2 bits (77), Expect = 0.017
Identities = 7/34 (20%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409
E++ + F+E DV+ + ++ +EF +
Sbjct: 37 EDIVKF----FEEIDVDGNGELNADEFTSCIEKM 66
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding
protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 33.4 bits (77), Expect = 0.023
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 15/88 (17%)
Query: 318 AEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
A +++ E FK+ D +G+ E++ + LD + E
Sbjct: 2 ACKVKAELEAAFKKLD-----ANGDGYVTALELQTF-MVTLDAYKALSKDKVK-----EA 50
Query: 378 MERMREHVFKEADVNRDRLISWEEFLEM 405
++ K AD N D IS EEFL
Sbjct: 51 SAKL----IKMADKNSDGKISKEEFLNA 74
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment
2, heavy meromyosin, essential light chain, motor
protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1
PDB: 3j04_A 3dtp_B 3dtp_A
Length = 1184
Score = 36.0 bits (83), Expect = 0.027
Identities = 29/179 (16%), Positives = 66/179 (36%), Gaps = 5/179 (2%)
Query: 87 LNEVVEALESDP-EFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTELDRLRE 145
L E V L ++ E +K +N ++ + + ELE + EL++ + E
Sbjct: 1009 LEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGE 1068
Query: 146 LAKRQYELSEGKAVPDAPGHVDHNNPHSFEINDLHKLIVQVTNDLAEADRKRRELFKEY- 204
+ +++E +A E+ + T+ A +K REL
Sbjct: 1069 SSDLHEQIAELQAQIAE--LKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHIS 1126
Query: 205 ELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQ 263
+LQ+ E ++ +++K + L +E E ++ + + + ++
Sbjct: 1127 DLQEDLESEKAARNKAEKQKRD-LSEELEALKTELEDTLDTTATQQELRGSDYKDDDDK 1184
Score = 30.6 bits (69), Expect = 1.4
Identities = 47/317 (14%), Positives = 113/317 (35%), Gaps = 45/317 (14%)
Query: 99 EFRKKLENASEADIRSGKIAQELEYVN---HQVRSKLDELKRTELDRLRELAKRQYELSE 155
++L+ E ++ +ELE + + ++ L E + E + E + + L+
Sbjct: 861 AKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAA 920
Query: 156 GKAVPDAPGHVDHNNPHSFEINDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQK 215
K +L +++ ++ + E + + ++L E + K
Sbjct: 921 KKQ-------------------ELEEILHEMEARIEEEEERSQQLQAEKK---------K 952
Query: 216 LSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKA 275
+ Q++ L+++ EE + + V G K++E+ + N +
Sbjct: 953 M-----QQQMLDLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERK 1007
Query: 276 FFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMR---EHVFKEA 332
D EEE K L +L ++ + ++L R ++ E+ R E + ++
Sbjct: 1008 LLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMI--SELEVRLKKEEKSRQELEKIKRKL 1065
Query: 333 DVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVN 392
+ L + + + +L K +E + R E+ + + K+
Sbjct: 1066 EGESSDLH-EQIAELQAQIAELKAQLAKKEEE---LQAALARLEDETSQKNNALKKIREL 1121
Query: 393 RDRLISWEEFLEMTRRQ 409
+ +E LE +
Sbjct: 1122 ESHISDLQEDLESEKAA 1138
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 35.8 bits (83), Expect = 0.028
Identities = 25/152 (16%), Positives = 54/152 (35%), Gaps = 27/152 (17%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
F D + + + D +E+ + + + K + + +E + + D
Sbjct: 334 TEIFRKLDTNNDGMLDRDELVRGYHEFMRL--KGVDSNSLIQNEGSTIEDQIDSLMPLLD 391
Query: 334 VNRDH-----------LDGNHVWDEEEVKMLFLKELDKM---------YKEGMPQNDLME 373
++ +D + E ++ F K DK + Q D
Sbjct: 392 MDGSGSIEYSEFIASAIDRTILLSRERMERAF-KMFDKDGSGKISTKELFKLFSQADSSI 450
Query: 374 RAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
+ EE+E + ++ D N+D + + EF+EM
Sbjct: 451 QMEELESI----IEQVDNNKDGEVDFNEFVEM 478
Score = 28.5 bits (64), Expect = 6.2
Identities = 9/59 (15%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 375 AEEMERMREHVFKEADVNRDRLISWEEFLE-MTRRQEFNQDPGWKPIDQEQVYSQAEVE 432
+E +++ E +F++ D N D ++ +E + I E + +++
Sbjct: 327 LDETKQLTE-IFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQID 384
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 34.9 bits (81), Expect = 0.028
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQEQVYSQA 429
++ M KE D + D I + EF M R+++ N G + + + A
Sbjct: 116 IHIDDM----IKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDA 165
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom
consortium, SGC, ATP-binding; 1.15A {Plasmodium
falciparum} PDB: 3o4y_A
Length = 191
Score = 34.5 bits (80), Expect = 0.033
Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 19/74 (25%)
Query: 346 DEEEVKMLFLKELDK--------------MYKEGMPQNDLMERAEEMERMREHVFKEADV 391
++ + F + D +Y N ++RM ++ D
Sbjct: 120 SKKLIYCAF-RVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRM----IRDVDK 174
Query: 392 NRDRLISWEEFLEM 405
N D I + EF EM
Sbjct: 175 NNDGKIDFHEFSEM 188
Score = 30.3 bits (69), Expect = 0.89
Identities = 12/92 (13%), Positives = 34/92 (36%), Gaps = 23/92 (25%)
Query: 319 EEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEM 378
++E+++ F D + G + ++L K+G+ + D ++
Sbjct: 49 YDVEKLKS-TFLVLDEDGK---G----------YITKEQL----KKGL-EKDGLKLPYNF 89
Query: 379 ERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410
+ + + D + I + EF+ ++
Sbjct: 90 DLL----LDQIDSDGSGKIDYTEFIAAALDRK 117
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 33.7 bits (78), Expect = 0.050
Identities = 8/38 (21%), Positives = 20/38 (52%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQ 413
+++++ + AD + D IS+EEF + + ++
Sbjct: 112 TQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 149
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 35.1 bits (81), Expect = 0.051
Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 20/149 (13%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
A F D +G+ D E L E K Q+ M A +E + V D
Sbjct: 338 TAIFHKMDKNGDGQLDRAE-----LIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVD 392
Query: 334 VNRDH-----------LDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDL---MERAEEME 379
+++ +D + E ++ F + D + +L ++
Sbjct: 393 FDKNGYIEYSEFVTVAMDRKTLLSRERLERAF-RMFDSDNSGKISSTELATIFGVSDVDS 451
Query: 380 RMREHVFKEADVNRDRLISWEEFLEMTRR 408
+ V E D N D + ++EF +M +
Sbjct: 452 ETWKSVLSEVDKNNDGEVDFDEFQQMLLK 480
Score = 28.1 bits (63), Expect = 8.0
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 372 MERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQEQVYSQAE 430
+ +E + + F + D N D + E +E + + +D V + +
Sbjct: 328 LTSQDETKELTAI-FHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD 385
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 34.2 bits (79), Expect = 0.051
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 22/92 (23%)
Query: 318 AEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
A ++ + F++ D + + L E ++G+ + L+ E
Sbjct: 33 ASGIQGLARF-FRQLDRDGS-------------RSLDADEF----RQGLAKLGLVLDQAE 74
Query: 378 MERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409
E + ++ D N + EEFL R
Sbjct: 75 AEGV----CRKWDRNGSGTLDLEEFLRALRPP 102
Score = 29.6 bits (67), Expect = 1.7
Identities = 24/156 (15%), Positives = 44/156 (28%), Gaps = 41/156 (26%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
FF D DG+ + L E ++G+ + L+ E E + ++ D
Sbjct: 40 ARFFRQLDRDGS--------RSLDADEF----RQGLAKLGLVLDQAEAEGV----CRKWD 83
Query: 334 VNRD-----------HLDGNHVWDEEEVKMLF------------LKELDKMYKEGMPQND 370
N E + F + +L +Y
Sbjct: 84 RNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKV 143
Query: 371 LMERAEEMERMREHVFKEADVN-RDRLISWEEFLEM 405
E E +R D + +D ++ EF +
Sbjct: 144 RSGEWTEDEVLRR-FLDNFDSSEKDGQVTLAEFQDY 178
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 35.1 bits (81), Expect = 0.052
Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 14/92 (15%)
Query: 315 MERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMER 374
+ EE + + + F+ D N D L +EL Y + + +
Sbjct: 339 LTSQEETKELTDI-FRHIDKNGDG-------------QLDRQELIDGYSKLSGEEVAVFD 384
Query: 375 AEEMERMREHVFKEADVNRDRLISWEEFLEMT 406
++E + + AD +R+ I + EF+ +
Sbjct: 385 LPQIESEVDAILGAADFDRNGYIDYSEFVTVA 416
Score = 32.7 bits (75), Expect = 0.29
Identities = 25/155 (16%), Positives = 60/155 (38%), Gaps = 24/155 (15%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
F + D +G+ D +E + K+ E + DL + E++ + AD
Sbjct: 350 DIFRHI-DKNGDGQLDRQE----LIDGYSKLSGEEVAVFDLPQIESEVDA----ILGAAD 400
Query: 334 VNRDH-----------LDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDL---MERAEEME 379
+R+ +D + +++++ F ++ D+ + ++L
Sbjct: 401 FDRNGYIDYSEFVTVAMDRKSLLSKDKLESAF-QKFDQDGNGKISVDELASVFGLDHLES 459
Query: 380 RMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQD 414
+ + + D N D + +EEF +M ++ N +
Sbjct: 460 KTWKEMISGIDSNNDGDVDFEEFCKMIQKLCSNNE 494
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 35.1 bits (81), Expect = 0.054
Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 14/89 (15%)
Query: 318 AEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
EE + + + FK+ D N D L KEL + Y + + +
Sbjct: 351 LEERKELTDI-FKKLDKNGD-------------GQLDKKELIEGYNVLRNFKNELGELKN 396
Query: 378 MERMREHVFKEADVNRDRLISWEEFLEMT 406
+E +++ KE D +++ I + EF+ +
Sbjct: 397 VEEEVDNILKEVDFDKNGYIEYSEFISVC 425
Score = 32.8 bits (75), Expect = 0.26
Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 23/146 (15%)
Query: 274 KAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEAD 333
F D +G+ D++E ++ + + +L EE++ + KE D
Sbjct: 358 TDIFKKLDKNGDGQLDKKE----LIEGYNVLRNFKNELGELKNVEEEVDN----ILKEVD 409
Query: 334 VNRDH-----------LDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDL---MERAEEME 379
+++ +D ++ EE ++ F D + + +L E
Sbjct: 410 FDKNGYIEYSEFISVCMDKQILFSEERLRRAF-NLFDTDKSGKITKEELANLFGLTSISE 468
Query: 380 RMREHVFKEADVNRDRLISWEEFLEM 405
+ V EAD N+D +I ++EF+ M
Sbjct: 469 KTWNDVLGEADQNKDNMIDFDEFVSM 494
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 33.3 bits (76), Expect = 0.057
Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 22/108 (20%)
Query: 298 LKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKE 357
L+ ++K + + ++ + ++E + + E D L+GN D +K +
Sbjct: 24 LEGINKQFLDDPKYSNDEDLPSKLEAFKVK-YMEFD-----LNGNGDIDIMSLKRM---- 73
Query: 358 LDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
+ K G+P+ E++R+ +E + S+ +FL M
Sbjct: 74 ---LEKLGVPKTH-----LELKRL----IREVSSGSEETFSYSDFLRM 109
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding
protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP:
a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A
1rk9_A 1g33_A
Length = 109
Score = 32.6 bits (75), Expect = 0.072
Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 18/92 (19%)
Query: 314 LMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLME 373
++ ++ + VF D D + +E+E+ LK +
Sbjct: 32 MVGLKKKSADDVKKVFHILDK-----DKSGFIEEDELG-SILKGFSSD---ARDLSA--- 79
Query: 374 RAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
+E + + D + D I EEF +
Sbjct: 80 --KETKTL----MAAGDKDGDGKIGVEEFSTL 105
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 33.4 bits (77), Expect = 0.087
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 24/97 (24%)
Query: 314 LMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLME 373
L ++ + E +F + D N + G L +E+ + + +
Sbjct: 31 LSVINNHIKYINE-LFYKLDTNHN---G----------SLSHREI----YTVLASVGIKK 72
Query: 374 RAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410
++ R+ + D+N I++ EF+ R +
Sbjct: 73 --WDINRI----LQALDINDRGNITYTEFMAGCYRWK 103
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand
(helix-loop-helix) calcium binding protein, four-HEL
domain, protein engineering; HET: FME; 1.44A {Bos
taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A
1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A
1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Length = 76
Score = 31.4 bits (72), Expect = 0.100
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 9/51 (17%)
Query: 355 LKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
LK + M G M +EM +E D N D +S+EEFL M
Sbjct: 29 LKLV--MQTLGPSLLKGMSTLDEM-------IEEVDKNGDGEVSFEEFLVM 70
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 31.6 bits (72), Expect = 0.10
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 24/90 (26%)
Query: 318 AEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
EE+ R+R VF D + + + EE + L EL + D
Sbjct: 23 GEELARLRS-VFAACDA-----NRSGRLEREEFRAL-CTEL------RVRPADA------ 63
Query: 378 MERMREHVFKEADVNRDRLISWEEFLEMTR 407
E VF+ D +RD I+++EF
Sbjct: 64 -----EAVFQRLDADRDGAITFQEFARGFL 88
Score = 27.3 bits (61), Expect = 3.3
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 375 AEEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408
EE+ R+R VF D NR + EEF +
Sbjct: 23 GEELARLRS-VFAACDANRSGRLEREEFRALCTE 55
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 33.1 bits (76), Expect = 0.13
Identities = 25/157 (15%), Positives = 53/157 (33%), Gaps = 43/157 (27%)
Query: 277 FAMHDLDGNHVWDEEEVKMLFL--------KELDKMYKEG-----------MPQNDLMER 317
F + D D + + +++ F +ELD M E + + +
Sbjct: 63 FQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGT 122
Query: 318 AEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
EE + F D +G+ EE +K L G + +E
Sbjct: 123 DEEDV-IVN-AFNLFD------EGDGKCKEETLKRS-LTTW------GEKFSQ-----DE 162
Query: 378 MERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQD 414
+++ EA ++ + LI ++F ++ + +
Sbjct: 163 VDQA----LSEAPIDGNGLIDIKKFAQILTKGAKEEG 195
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A
{Plasmodium falciparum K1}
Length = 197
Score = 32.9 bits (76), Expect = 0.14
Identities = 17/138 (12%), Positives = 46/138 (33%), Gaps = 41/138 (29%)
Query: 298 LKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDH-----------LDGNHVWD 346
+E+ +G+ + + ++ ++ ++ D N +D
Sbjct: 76 SQEI----LDGLKKIGYQKIPPDIHQV----LRDIDSNASGQIHYTDFLAATIDKQTYLK 127
Query: 347 EEEVKMLFLKELDK--------------MYKEGMPQNDLMERAEEMERMREHVFKEADVN 392
+E + F K D ++ + + + + + +E D+N
Sbjct: 128 KEVCLIPF-KFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSL-------LQEVDLN 179
Query: 393 RDRLISWEEFLEMTRRQE 410
D I + EF+ M +++
Sbjct: 180 GDGEIDFHEFMLMMSKKK 197
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 30.6 bits (70), Expect = 0.14
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 381 MREHVFKEADVNRDRLISWEEFLEMTRRQ 409
M E +FKE DVN D +S+EE ++
Sbjct: 1 MAEALFKEIDVNGDGAVSYEEVKAFVSKK 29
Score = 30.2 bits (69), Expect = 0.20
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 21/82 (25%)
Query: 324 MREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMRE 383
M E +FKE DV +G+ EEVK F+ + + E + ++ +
Sbjct: 1 MAEALFKEIDV-----NGDGAVSYEEVKA-FVSKKRAIKNE-----------QLLQLI-- 41
Query: 384 HVFKEADVNRDRLISWEEFLEM 405
FK D + + I EF +
Sbjct: 42 --FKSIDADGNGEIDQNEFAKF 61
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus}
SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 31.5 bits (72), Expect = 0.18
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 19/88 (21%)
Query: 318 AEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
++++ +F+ D D + D +E+K L K + + E
Sbjct: 37 KMSASQVKD-IFRFIDN-----DQSGYLDGDELKYF----LQKFQSDARELTE-----SE 81
Query: 378 MERMREHVFKEADVNRDRLISWEEFLEM 405
+ + AD + D I +EF EM
Sbjct: 82 TKSL----MDAADNDGDGKIGADEFQEM 105
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 32.2 bits (74), Expect = 0.18
Identities = 22/144 (15%), Positives = 50/144 (34%), Gaps = 23/144 (15%)
Query: 277 FAMHDLDGNHVWDEEEVKMLFL---------KELDKMYKEGMPQNDLMERAEEMERMREH 327
F + D + + + D+++++ F +ELD M KE + + + E
Sbjct: 31 FTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA---SGPINFTVFLTMFGEK 87
Query: 328 VFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKE-GMPQNDLMERAEEMERMREHVF 386
+ K AD + V D + + L+++ G EE++ M +
Sbjct: 88 L-KGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTP-----EEIKNM----W 137
Query: 387 KEADVNRDRLISWEEFLEMTRRQE 410
+ + ++ + E
Sbjct: 138 AAFPPDVAGNVDYKNICYVITHGE 161
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 30.8 bits (70), Expect = 0.18
Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 26/86 (30%)
Query: 318 AEEMERMREHVFKEADVNRD-HLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAE 376
E + E +F + D + D + G EV+ +FLK G+P L
Sbjct: 6 PAEKAKYDE-IFLKTDKDMDGFVSG------LEVREIFLKT-------GLPSTLL----- 46
Query: 377 EMERMREHVFKEADVNRDRLISWEEF 402
H++ D +S ++F
Sbjct: 47 ------AHIWSLCDTKDCGKLSKDQF 66
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A;
EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 30.9 bits (70), Expect = 0.20
Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 17/109 (15%)
Query: 307 EGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGM 366
D++ R + H + N D + EE + + +
Sbjct: 4 MATADRDILARLHKAVTSHYHAITQEFENFDT-MKTNTISREEFRAI-------CNRRVQ 55
Query: 367 PQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDP 415
D E+ +R+ + E VN + + +FL +
Sbjct: 56 ILTD-----EQFDRL----WNEMPVNAKGRLKYPDFLSRFSSETAATPM 95
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 31.7 bits (73), Expect = 0.21
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408
EE++ M EAD + D +S +EFL + ++
Sbjct: 115 EELQEM----IDEADRDGDGEVSEQEFLRIMKK 143
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 31.7 bits (73), Expect = 0.22
Identities = 9/33 (27%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408
++E + ++ D+N D + +EEF+ M R
Sbjct: 125 RDIEEI----IRDVDLNGDGRVDFEEFVRMMSR 153
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 32.1 bits (74), Expect = 0.23
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPG 416
EE++ M +EAD++ D +++EEF++M +
Sbjct: 120 EEVDEM----IREADIDGDGQVNYEEFVQMMTAKGGGGGAA 156
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 31.4 bits (72), Expect = 0.28
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409
E++ + K +V+ + I +++F+E RQ
Sbjct: 119 AEVDEL----LKGVEVDSNGEIDYKKFIEDVLRQ 148
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP:
a.39.1.4
Length = 109
Score = 30.7 bits (70), Expect = 0.28
Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 26/120 (21%)
Query: 290 EEEVKMLFLKELDKM----YKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVW 345
+ +V LK + YK + + + F D D +
Sbjct: 9 DADVAAA-LKACEAADSFNYKAFF---AKVGLTAKSADDIKKAFFVID-----QDKSGFI 59
Query: 346 DEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
+E+E+K LFL+ D E + K D + D I +E+ +
Sbjct: 60 EEDELK-LFLQV---FSAGARALTD-----AETKAF----LKAGDSDGDGAIGVDEWAAL 106
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation,
calcium, metal binding protein; 1.95A {Gallus gallus}
PDB: 2kqy_A
Length = 109
Score = 30.7 bits (70), Expect = 0.31
Identities = 12/74 (16%), Positives = 21/74 (28%), Gaps = 21/74 (28%)
Query: 346 DEEEVKMLFLKELDK--------------MYKEGMPQNDLMERAEEMERMREHVFKEADV 391
+++K +F LD+ + L E + D
Sbjct: 40 TPDQIKKVF-GILDQDKSGFIEEEELQLFLKNFSSSARVLTS--AETKAF----LAAGDT 92
Query: 392 NRDRLISWEEFLEM 405
+ D I EEF +
Sbjct: 93 DGDGKIGVEEFQSL 106
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 30.3 bits (69), Expect = 0.35
Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 18/92 (19%)
Query: 314 LMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLME 373
+ +++ + +F+ D D + +E+E+K FL+ +
Sbjct: 32 ISGMSKKSSSQLKEIFRILDN-----DQSGFIEEDELK-YFLQRFES---GARVLTA--- 79
Query: 374 RAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
E + AD + D I EEF EM
Sbjct: 80 --SETKTF----LAAADHDGDGKIGAEEFQEM 105
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 29.8 bits (68), Expect = 0.41
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 8/52 (15%)
Query: 355 LKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMT 406
EL K+G+ + E++ + AD+++ I + EF+ T
Sbjct: 42 FDEL----KDGLKRVGSELMESEIKDL----MDAADIDKSGTIDYGEFIAAT 85
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding,
ME binding protein-toxin complex; 2.20A {Chlamydomonas
reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 31.0 bits (71), Expect = 0.42
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEF 411
EE++ M EAD N D I +EF+ + ++
Sbjct: 137 EELQEM----IAEADRNDDNEIDEDEFIRIMKKTSL 168
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT
calmodulin chimera; calcium sensor, fluorescent protein;
HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A*
3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A*
3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 32.2 bits (73), Expect = 0.43
Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
EE++ M +EAD++ D +++EEF++M
Sbjct: 421 EEVDEM----IREADIDGDGQVNYEEFVQM 446
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II,
calcium/phospholipid binding protein,
calcium-phospholipid protein complex; 2.25A {Homo
sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Length = 96
Score = 30.1 bits (68), Expect = 0.44
Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 20/91 (21%)
Query: 315 MERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMER 374
ME A ME M F + ++ +L +E++++L KE + +
Sbjct: 4 MEHA--METMMF-TFHKFAGDKGYLT------KEDLRVLMEKEFPGFLENQKDPLAV--- 51
Query: 375 AEEMERMREHVFKEADVNRDRLISWEEFLEM 405
+ + K+ D RD + ++ F +
Sbjct: 52 --------DKIMKDLDQCRDGKVGFQSFFSL 74
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 145
Score = 30.6 bits (70), Expect = 0.48
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
E+E + KE V+ D I++E F++M
Sbjct: 112 SEVEEL----MKEVSVSGDGAINYESFVDM 137
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 30.6 bits (70), Expect = 0.52
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
E++ +AD N D I+ EEFLE
Sbjct: 107 EKVAEQ----VMKADANGDGYITLEEFLEF 132
Score = 28.6 bits (65), Expect = 2.3
Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 8/54 (14%)
Query: 356 KELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409
+E+ K + + ++ + ++ + FK D + + I EF +
Sbjct: 20 EEV----KAFVSKKRAIKNEQLLQLI----FKSIDADGNGEIDQNEFAKFYGSI 65
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A
1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A
2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 30.6 bits (70), Expect = 0.55
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
E++E + K++D N D I ++EFL+M
Sbjct: 132 EDIEDL----MKDSDKNNDGRIDFDEFLKM 157
>3rd3_A Probable transcriptional regulator; 2.40A {Pseudomonas aeruginosa}
Length = 197
Score = 30.7 bits (70), Expect = 0.60
Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 21/103 (20%)
Query: 77 EELGIEY-NRYLNEVVEALESDPE-------------FRKKLENASEADIRSG----KIA 118
E+ G Y + ++ ++K L+NA K++
Sbjct: 55 EQFGQALLEDYFRVYLADMDQRFSAPGLNARERLMSYWQKWLDNACPPCDEQRCLVVKLS 114
Query: 119 QELEYVNHQVRSKLDELKRTELDRLREL---AKRQYELSEGKA 158
E+ ++ +R L + ++RL + L+ A
Sbjct: 115 AEVADLSESMRITLRDGSDGIIERLVGCLGQGRDDGSLAPCDA 157
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 29.0 bits (66), Expect = 0.63
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 9/49 (18%)
Query: 361 MYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409
M G P EE++ M +EADV++D +++EEF M ++
Sbjct: 32 MAGLGQPLPQ-----EELDAM----IREADVDQDGRVNYEEFARMLAQE 71
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule 2,
metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B
2vtg_A
Length = 150
Score = 30.2 bits (68), Expect = 0.70
Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 23/114 (20%)
Query: 298 LKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKE 357
L E+++ + +D E++ +E + E D+ + D +K +
Sbjct: 26 LAEINREFLCDQKYSDEENLPEKLTAFKE-KYMEFDL-----NNEGEIDLMSLKRM---- 75
Query: 358 LDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLE-MTRRQE 410
M K G+P+ EM++M E IS+ +F+ M ++
Sbjct: 76 ---MEKLGVPKTH-----LEMKKM----ISEVTGGVSDTISYRDFVNMMLGKRS 117
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP:
a.39.1.10
Length = 78
Score = 28.7 bits (65), Expect = 0.72
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408
+E++RM E D + D I + EF+
Sbjct: 38 DEVQRM----MAEIDTDGDGFIDFNEFISFCNA 66
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 31.6 bits (72), Expect = 0.72
Identities = 25/162 (15%), Positives = 59/162 (36%), Gaps = 8/162 (4%)
Query: 102 KKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTELDRLRELAKRQYELSEGKAVPD 161
KKL+ + + R K+ LE Q++ K+DE + L ++ + S
Sbjct: 907 KKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEK-- 964
Query: 162 APGHVDHNNPHSFEINDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTD 221
+ +V + E + R+EL + Q + ++ +
Sbjct: 965 ---LRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELH---QTQTEKKTIEEWADKYK 1018
Query: 222 QEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQ 263
E E+ + + E+ K+ ++ + K++ E +++
Sbjct: 1019 HETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKK 1060
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 30.2 bits (69), Expect = 0.75
Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 22/138 (15%)
Query: 277 FAMHDLDGNHVWDEEEVKMLFL--------KELDKMYKEGMPQNDLMERAEEMERMREHV 328
F M D + + D+E++ + + L+ M E + + E +
Sbjct: 13 FNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA---PGPINFTMFLTMFGEKL 69
Query: 329 FKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKE-GMPQNDLMERAEEMERMREHVFK 387
D + +DEE + L ++ G D EE++ M ++
Sbjct: 70 -NGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTD-----EEVDEM----YR 119
Query: 388 EADVNRDRLISWEEFLEM 405
EA +++ ++ EF +
Sbjct: 120 EAPIDKKGNFNYVEFTRI 137
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D*
2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A
1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 30.1 bits (69), Expect = 0.77
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
+E++ M +EAD++ D I++EEF+ M
Sbjct: 119 DEVDEM----IREADIDGDGHINYEEFVRM 144
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1;
calmodulin-like domain, EF calcium binding protein,
transferase; 2.00A {Arabidopsis thaliana}
Length = 166
Score = 30.2 bits (69), Expect = 0.77
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
+E + ++ D + D I + EF+ M
Sbjct: 133 VRIEEL----MRDVDQDNDGRIDYNEFVAM 158
Score = 29.8 bits (68), Expect = 1.3
Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 8/55 (14%)
Query: 355 LKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409
+EL K G+ + + E+ + + ADV+ I ++EF+ T
Sbjct: 46 FEEL----KAGLKRVGANLKESEILDL----MQAADVDNSGTIDYKEFIAATLHL 92
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping,
EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB:
1h4b_A
Length = 86
Score = 29.1 bits (66), Expect = 0.78
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408
+E+ RM E D + D IS++EF + R
Sbjct: 46 DEVRRM----MAEIDTDGDGFISFDEFTDFARA 74
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle,
cell division, mitosis, MR transport, nuclear pore
complex, nucleus, phosphoprotein; 2.50A {Saccharomyces
cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 30.2 bits (69), Expect = 0.90
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
EE+ M +E D++ D I+ EF+ +
Sbjct: 132 EELRAM----IEEFDLDGDGEINENEFIAI 157
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB:
1irj_A*
Length = 113
Score = 29.5 bits (66), Expect = 0.93
Identities = 12/60 (20%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 346 DEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
L E ++ ++ + + +++ + E++ EH+ ++ D N D+ +S+EEF+ +
Sbjct: 24 KLGHPDTLNQGEFKELVRKDLQ--NFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIML 81
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP;
2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A
2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A*
1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A*
3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 29.8 bits (68), Expect = 0.96
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
+++E + K+ D N D I ++EFLE
Sbjct: 131 DDIEEL----MKDGDKNNDGRIDYDEFLEF 156
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 28.8 bits (65), Expect = 0.99
Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
EE++ M +EAD++ D +++EEF++M
Sbjct: 65 EEVDEM----IREADIDGDGQVNYEEFVQM 90
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 29.5 bits (67), Expect = 1.3
Identities = 7/30 (23%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
E+++ M E D + + +EEF+ +
Sbjct: 127 EDLDAM----IDEIDADGSGTVDFEEFMGV 152
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 28.7 bits (65), Expect = 1.5
Identities = 7/30 (23%), Positives = 12/30 (40%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
E + + D + D +I +EF M
Sbjct: 80 AETKAF----LADGDKDGDGMIGVDEFAAM 105
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 28.6 bits (64), Expect = 1.5
Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 26/85 (30%)
Query: 319 EEMERMREHVFKEADVNRD-HLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
+ R+ +F D HL G + + + ++ +PQ L
Sbjct: 11 SSRLKYRQ-LFNSHDKTMSGHLTG------PQARTILMQS-------SLPQAQL------ 50
Query: 378 MERMREHVFKEADVNRDRLISWEEF 402
++ +D+++D ++ EEF
Sbjct: 51 -----ASIWNLSDIDQDGKLTAEEF 70
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.5 bits (65), Expect = 1.5
Identities = 6/33 (18%), Positives = 16/33 (48%), Gaps = 9/33 (27%)
Query: 231 EAEEIRKRKSNIDKADVHHPGS------KKQLE 257
E + ++K ++++ K ++ S K +E
Sbjct: 18 EKQALKKLQASL-K--LYADDSAPALAIKATME 47
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4
PDB: 2pas_A 3pat_A
Length = 110
Score = 28.7 bits (65), Expect = 1.5
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 4/30 (13%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM 405
E + K AD + D I +EF +
Sbjct: 81 AETKAF----LKAADKDGDGKIGIDEFETL 106
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 30.2 bits (68), Expect = 1.5
Identities = 9/50 (18%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 356 KELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
+E+ K+ ++ ++ E F DV+ + +S++EF+ +
Sbjct: 273 EEVQKVLEDAHIPESARKKFEHQ-------FSVVDVDDSKSLSYQEFVML 315
Score = 29.4 bits (66), Expect = 2.6
Identities = 4/40 (10%), Positives = 18/40 (45%)
Query: 371 LMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQE 410
+ + + +++ +F+ AD + + + E++ +
Sbjct: 214 FVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL 253
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex,
membrane protein, endocytosis; HET: ANP; 3.10A {Mus
musculus}
Length = 550
Score = 30.1 bits (67), Expect = 1.7
Identities = 33/243 (13%), Positives = 76/243 (31%), Gaps = 31/243 (12%)
Query: 176 INDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEI 235
D+ L KR L + + Y + + ++ + K++ L + I
Sbjct: 286 FRDIQGLPRHAALRKLNDLVKRARLVRVHAYIISYLKKEMPTVFGKENKKKQLILKLPVI 345
Query: 236 RKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKM 295
+ ++++E+ D T+F+ + LD + + + M
Sbjct: 346 FAKIQLEHHISPGDFPDCQKMQELLMAHDF---TKFHSLKPKLLEALD-DMLAQDIAKLM 401
Query: 296 LFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFL 355
L++ + E E + + + + + + W + K +
Sbjct: 402 PLLRQEELESVEAGVAGGAFEGTRMGPFVERGPDEAIEDGEEGSEDDAEWVVTKDKSKYD 461
Query: 356 K---ELDK-------------MYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISW 399
+ L M +P + L ++K +DV+RD ++
Sbjct: 462 EIFYNLAPADGKLSGSKAKTWMVGTKLPNSVL-----------GRIWKLSDVDRDGMLDD 510
Query: 400 EEF 402
EEF
Sbjct: 511 EEF 513
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 27.9 bits (63), Expect = 1.8
Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQD 414
E+E KEAD + + +I EF+++ ++ +
Sbjct: 45 AEVEEA----MKEADEDGNGVIDIPEFMDLIKKSKNALK 79
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 28.5 bits (64), Expect = 1.9
Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 25/119 (21%)
Query: 294 KMLFLKELDKMYKEGMPQNDLMER---AEEMERMREHVFKEADVNRDHLDGNHVWDEEEV 350
K + LD++ K+ + ++E +E + E D L+GN D +
Sbjct: 1 KAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKE-KYMEFD-----LNGNGDIDIMSL 54
Query: 351 KMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409
K + + K G+P+ E++++ E S+ +FL M +
Sbjct: 55 KRM-------LEKLGVPKTH-----LELKKL----IGEVSSGSGETFSYPDFLRMMLGK 97
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 28.8 bits (65), Expect = 2.1
Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408
E+ + M +E D++ D ++ EF + R
Sbjct: 77 EDAQGM----VREGDLDGDGALNQTEFCVLMVR 105
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal
binding Pro; NMR {Glycine max}
Length = 92
Score = 27.9 bits (63), Expect = 2.1
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEM--TRRQEFNQDP 415
EE+E+M KEAD++ D +++EEF++M T R +
Sbjct: 45 EEVEQM----IKEADLDGDGQVNYEEFVKMMMTVRGGGGGNG 82
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata}
SCOP: a.39.1.4
Length = 109
Score = 28.3 bits (64), Expect = 2.1
Identities = 7/33 (21%), Positives = 13/33 (39%), Gaps = 4/33 (12%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRR 408
E + + D + D I +EF +M +
Sbjct: 80 TETKAL----LAAGDSDHDGKIGADEFAKMVAQ 108
>3a8r_A Putative uncharacterized protein; EF-hand, membrane,
oxidoreductase, transmembrane, calcium BI protein; 2.40A
{Oryza sativa japonica group}
Length = 179
Score = 29.3 bits (65), Expect = 2.2
Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 9/86 (10%)
Query: 252 SKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQ 311
+K +L++ + EQ + + FF M D + + EEVK ++
Sbjct: 80 TKDELKDFY-EQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVK--------EIIALSASA 130
Query: 312 NDLMERAEEMERMREHVFKEADVNRD 337
N L + E + + +E D
Sbjct: 131 NKLSKIKERADEYTALIMEELDPTNL 156
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi
malaria parasite; 2.70A {Plasmodium falciparum} PDB:
1ltk_A* 3oza_A
Length = 417
Score = 29.8 bits (68), Expect = 2.2
Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 12/50 (24%)
Query: 76 AEELGIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVN 125
EE G + N+V E +F+ L AD+ ++N
Sbjct: 127 IEEEGKGVDANGNKVKANKEDVEKFQNDL--TKLADV----------FIN 164
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 27.3 bits (61), Expect = 2.3
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 346 DEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
E + L +EL ++ + P L++ ++ + F+E D N D +S+EEF +
Sbjct: 19 KEGDPNQLSKEELKQLIQAEFP--SLLKGPRTLDDL----FQELDKNGDGEVSFEEFQVL 72
>1nub_A Basement membrane protein BM-40; extracellular module,
glycoprotein, anti-adhesive protein, C binding,
site-directed mutagenesis; HET: NAG; 2.80A {Homo
sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A*
1bmo_A*
Length = 229
Score = 29.2 bits (64), Expect = 2.4
Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 15/116 (12%)
Query: 297 FLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLK 356
+LK + E N+L+ +++ + H ++ DH + N+ V F
Sbjct: 104 WLKNVLVTLYERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPEKNYNMYIFPVHWQF-G 162
Query: 357 ELDKMYKEGMPQNDLMERAE---------EMERMREHVFKEADVNRDRLISWEEFL 403
+LD+ P + + E ME F+ D++ D+ I+ +E+
Sbjct: 163 QLDQH-----PIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWA 213
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding
protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A
3nsl_A
Length = 101
Score = 27.9 bits (62), Expect = 2.5
Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 29/122 (23%)
Query: 309 MPQNDLMERAEEMERMRE--HVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGM 366
M + +E+A + + + ++ L + E+K L KEL
Sbjct: 1 MAR--PLEQA--VAAIVCTFQEYAGRCGDKYKLC------QAELKELLQKELATWTPTEF 50
Query: 367 PQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRR------QEFNQDPGWKPI 420
+ D D N+D + + E++ + F P P
Sbjct: 51 RECDY-----------NKFMSVLDTNKDCEVDFVEYVRSLACLCLYCHEYFKDCPSEPPC 99
Query: 421 DQ 422
Q
Sbjct: 100 SQ 101
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome
segregation, cell adhesion, kleisin, MIT cell cycle;
HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP:
c.37.1.12
Length = 430
Score = 29.7 bits (67), Expect = 2.5
Identities = 18/135 (13%), Positives = 46/135 (34%), Gaps = 24/135 (17%)
Query: 74 NMAEELGIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLD 133
+A + +E +R EV +++ E+ + E + + + + ++ ++++
Sbjct: 156 QIAAQSPVELSRMFEEVSGSIQYKKEYEELKEKIEKLSKSATESIKNRRRIHGELKTYKS 215
Query: 134 ELKRTE-----LDRLRELAKRQYELSEGKAVPDAPGHVDHNNPHSFEINDLHKLIVQVTN 188
R E R ++ E L ++ N
Sbjct: 216 PGLEVLFQGPRGSRYDEAEGRFEVINN-------------------ETEQLKAEEKKILN 256
Query: 189 DLAEADRKRRELFKE 203
+ +KR+ELF++
Sbjct: 257 QFLKIKKKRKELFEK 271
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal
binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A
2wcf_A 2wce_A 1e8a_A 1gqm_A
Length = 95
Score = 27.8 bits (62), Expect = 2.7
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 11/58 (18%)
Query: 348 EEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
E+K L KEL K + + + +F+ D N+D + ++EF+ +
Sbjct: 34 GELKQLLTKELANTIKNIKDKAVI-----------DEIFQGLDANQDEQVDFQEFISL 80
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand,
cytosolic, calcium, coiled coil, disease mutation,
glycoprotein, ION transport; NMR {Homo sapiens} PDB:
2kle_A 2kq6_A 2y4q_A
Length = 123
Score = 28.1 bits (62), Expect = 3.2
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 236 RKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKM 295
+K + + G K +E+ Q+ G+T+ +A F +D DG+ E E +
Sbjct: 45 KKNTVDDISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQ 104
Query: 296 L 296
+
Sbjct: 105 M 105
>2hyj_A Putative TETR-family transcriptional regulator; HTH DNA binding
motif, structural genomics, PSI-2, Pro structure
initiative; 2.19A {Streptomyces coelicolor} SCOP:
a.4.1.9 a.121.1.1
Length = 200
Score = 28.9 bits (65), Expect = 3.2
Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 23/108 (21%)
Query: 77 EELGIEY-----NRYLNEVVEALESDPEFRKKL--------ENASEADIRSG----KIAQ 119
E L I + + VVE ++P ++L E + G
Sbjct: 57 ETLQISTLDKAFVDFWHRVVEPALAEPPGLRRLRAVCANSVGYLEEPLLPGGCLLTAALS 116
Query: 120 ELEYVNHQVRSKLDELKRTELDRLRELAKRQYELSEGKAVPDAPGHVD 167
E + +VR + E+ ++LR L+ + P D
Sbjct: 117 EYDGRPGRVRDAVAEVWSRWREQLRAD------LTAAVDKGELPAGFD 158
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis;
HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB:
2ze5_A* 2ze7_A* 2ze8_A
Length = 253
Score = 29.0 bits (65), Expect = 3.3
Identities = 31/225 (13%), Positives = 65/225 (28%), Gaps = 42/225 (18%)
Query: 27 HQFINALPVQQKQPSPQRFADEEFDKMTANESINEINNNEHH---EGGNGNMAEELGIEY 83
++++ P+ + D E + +E EGG+
Sbjct: 58 RIYLDSRPLTEG------ILDAESAHR-RLIFEVDWRKSEEGLILEGGSI---------- 100
Query: 84 NRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTELDR- 142
LN + ++ F+ ++ D + + + ++ E+ DR
Sbjct: 101 -SLLNCMAKSPFWRSGFQWHVKRLRLGDS---------DAFLTRAKQRVAEMFAIREDRP 150
Query: 143 --LRELAKRQYELSEGKAVPDAPGH---VDHNNPHSFEINDLHKLIVQVTNDLAEADRKR 197
L ELA+ + + D G+ + H I+ L + +L E
Sbjct: 151 SLLEELAELWNYPAARPILEDIDGYRCAIRFARKHDLAISQLPNIDAGRHVELIE----- 205
Query: 198 RELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNI 242
+ EY + D + IR +S+
Sbjct: 206 -AIANEYLEHALSQERDFPQWPEDGAGQPVCPVTLTRIRGSRSHH 249
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 27.8 bits (62), Expect = 3.5
Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 26/85 (30%)
Query: 319 EEMERMREHVFKEADVNRD-HLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
E+ E F+ + + G K F K + +L
Sbjct: 19 EQREYYVN-QFRSLQPDPSSFISG------SVAKNFFTKS-------KLSIPEL------ 58
Query: 378 MERMREHVFKEADVNRDRLISWEEF 402
++++ +D + D ++ EF
Sbjct: 59 -----SYIWELSDADCDGALTLPEF 78
>3on4_A Transcriptional regulator, TETR family; structural genomics, PSI-2,
protein structure initiative, MI center for structural
genomics; HET: MSE; 1.85A {Legionella pneumophila subsp}
Length = 191
Score = 28.5 bits (64), Expect = 3.6
Identities = 9/90 (10%), Positives = 33/90 (36%), Gaps = 17/90 (18%)
Query: 77 EELGIEY-NRYLNEVVEALES-------DPE------FRKKLENASEADIR---SGKIAQ 119
E+LG+ + + +++ L + F L ++ + G A
Sbjct: 55 EDLGVAVISWHTDKIAAVLSDISNNSSLSAKEKIQKFFDAILTLTYNSENKMCLGGMFAS 114
Query: 120 ELEYVNHQVRSKLDELKRTELDRLRELAKR 149
+ + + ++++ + ++ L+ + +
Sbjct: 115 DFQSLPVSIQNQAKKFFELIIEWLKGVLET 144
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC
transporter ATPase domain-like; HET: DNA ADP; 2.70A
{Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B*
Length = 371
Score = 29.0 bits (65), Expect = 3.7
Identities = 16/143 (11%), Positives = 46/143 (32%)
Query: 185 QVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDK 244
++ L+ ++ E + +E+ + +E E+ L++ E+ ++ ++
Sbjct: 136 EIAKFLSLKPSEKLETVAKLLGIDEFEKCYQKMGEIVKEYEKRLERIEGELNYKEESLKA 195
Query: 245 ADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKM 304
+K+ E++ + +++ L +V ++ E D
Sbjct: 196 RLKEMSNLEKEKEKLTKFVEYLDKVRRIFGRNGFQAYLREKYVPLIQKYLNEAFSEFDLP 255
Query: 305 YKEGMPQNDLMERAEEMERMREH 327
Y D R +
Sbjct: 256 YSFVELTKDFEVRVHAPNGVLTI 278
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural
genomics, PSI-B protein structure initiative, NEW YORK
structural genomics consortium; 1.54A {Homo sapiens}
PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Length = 93
Score = 27.1 bits (60), Expect = 3.7
Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 23/99 (23%)
Query: 309 MPQNDLMERAEEMERMRE--HVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGM 366
M +E+A ++ M H + + ++ L+ + E+K L +EL +
Sbjct: 1 MAC--PLEKA--LDVMVSTFHKYSGKEGDKFKLN------KSELKELLTRELPSFLGKRT 50
Query: 367 PQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
+ + + D NRD + ++E+
Sbjct: 51 DEAAF-----------QKLMSNLDSNRDNEVDFQEYCVF 78
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO,
EF-hand calcium binding proteins, S100 proteins, protein
dynamics, binding protein; 2.10A {Homo sapiens} PDB:
2l0u_A 2l0v_A 2l50_A 2l51_A
Length = 100
Score = 27.5 bits (61), Expect = 3.9
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 11/58 (18%)
Query: 348 EEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
+ + KEL+ M + + + + + D N D IS++E+ +
Sbjct: 34 SSFREMLQKELNHMLSDTGNRKAA-----------DKLIQNLDANHDGRISFDEYWTL 80
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100
protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB:
2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Length = 100
Score = 27.1 bits (60), Expect = 4.4
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 356 KELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
L M KE P N L ++ VF++ D N D+ I + EFL +
Sbjct: 29 PSLLTMMKENFP-NFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSL 77
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 26.7 bits (60), Expect = 4.7
Identities = 6/34 (17%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409
E+ + E D + I +++FL++ +
Sbjct: 43 PEILEL----MNEYDREGNGYIGFDDFLDIMTEK 72
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, ,
structural genomics, protein structure initiative; 2.60A
{Helicobacter pylori}
Length = 475
Score = 28.6 bits (65), Expect = 4.9
Identities = 7/23 (30%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Query: 298 LKELDK--MYKEGMPQNDLMERA 318
+ LDK + + + ++ LME A
Sbjct: 9 VNALDKRAIEELFLSEDILMENA 31
Score = 28.6 bits (65), Expect = 4.9
Identities = 7/23 (30%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Query: 355 LKELDK--MYKEGMPQNDLMERA 375
+ LDK + + + ++ LME A
Sbjct: 9 VNALDKRAIEELFLSEDILMENA 31
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase,
multienzyme complex, oxidoreductase; HET: TDP; 2.0A
{Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB:
3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Length = 368
Score = 28.4 bits (64), Expect = 5.8
Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 12/58 (20%)
Query: 336 RDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEM-----ERMREHVFKE 388
R L+ +W EEE + +++ + KE +++A+E + +F+E
Sbjct: 300 RKFLEAKGLWSEEEENNV-IEQAKEEIKE------AIKKADETPKQKVTDLISIMFEE 350
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1;
phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 28.3 bits (62), Expect = 6.0
Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 25/100 (25%)
Query: 315 MERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMER 374
M++ ++++ ++AD N+D N + + +E+K K +
Sbjct: 3 MDQRQKLQHWIHSCLRKADKNKD----NKM-NFKELKDFL-----KELNIQVDDGYA--- 49
Query: 375 AEEMERMREHVFKEADVNRDRLISWEEFLE----MTRRQE 410
+F+E D ++ + EE +T+R E
Sbjct: 50 --------RKIFRECDHSQTDSLEDEEIETFYKMLTQRAE 81
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis complex;
NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 26.6 bits (59), Expect = 6.0
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 26/85 (30%)
Query: 319 EEMERMREHVFKEADVNRD-HLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEE 377
E+ + FK + + + G K F K +P +L
Sbjct: 6 EQRQYYVN-QFKTIQPDLNGFIPG------SAAKEFFTKS-------KLPILEL------ 45
Query: 378 MERMREHVFKEADVNRDRLISWEEF 402
H+++ +D ++D ++ +EF
Sbjct: 46 -----SHIWELSDFDKDGALTLDEF 65
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 26.4 bits (59), Expect = 6.1
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 376 EEMERMREHVFKEADVNRDRLISWEEFLEMTRRQ 409
EE++ + +E D + I +EEFL M RQ
Sbjct: 56 EELDAI----IEEVDEDGSGTIDFEEFLVMMVRQ 85
>3rss_A Putative uncharacterized protein; unknown function,
ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET:
NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A*
3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A*
3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A*
3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Length = 502
Score = 28.3 bits (64), Expect = 6.6
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 8/49 (16%)
Query: 299 KELDK--MYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVW 345
KE+D+ + + G+ LMERA V + +L
Sbjct: 14 KEIDELTIKEYGVDSRILMERA------GISVVLAMEEELGNLSDYRFL 56
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus
musculus} PDB: 2dg2_A
Length = 265
Score = 28.1 bits (63), Expect = 6.6
Identities = 5/22 (22%), Positives = 10/22 (45%), Gaps = 2/22 (9%)
Query: 299 KELDK--MYKEGMPQNDLMERA 318
+ +D+ + + LME A
Sbjct: 37 QAVDQELFNEYQFSVDQLMELA 58
Score = 28.1 bits (63), Expect = 6.6
Identities = 5/22 (22%), Positives = 10/22 (45%), Gaps = 2/22 (9%)
Query: 356 KELDK--MYKEGMPQNDLMERA 375
+ +D+ + + LME A
Sbjct: 37 QAVDQELFNEYQFSVDQLMELA 58
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase,
multi-enzyme complex, acylation, oxidative
decarboxylation, maple syrup urine disease; HET: TDP;
1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A*
2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A*
1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A*
1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Length = 400
Score = 28.0 bits (63), Expect = 6.7
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 12/58 (20%)
Query: 336 RDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEM-----ERMREHVFKE 388
R +L WDEE+ K K+ + E E+AE + V++E
Sbjct: 320 RHYLLSQGWWDEEQEKAW-RKQSRRKVME------AFEQAERKPKPNPNLLFSDVYQE 370
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2)
tetramer, structural genomics; HET: TDP; 1.90A {Thermus
thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A*
1umb_A*
Length = 367
Score = 28.0 bits (63), Expect = 6.8
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 12/58 (20%)
Query: 336 RDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEM-----ERMREHVFKE 388
R L+ +W+EE + + +E+ + ++ AEE E M E VF E
Sbjct: 301 RRFLEARGLWNEEWEEDV-REEIRAELER------GLKEAEEAGPVPPEWMFEDVFAE 351
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure,
alpha-beta structure, structural genomics, protein
structure initiative; HET: MSE; 2.00A {Enterococcus
faecalis}
Length = 316
Score = 28.0 bits (63), Expect = 6.9
Identities = 5/36 (13%), Positives = 13/36 (36%)
Query: 158 AVPDAPGHVDHNNPHSFEINDLHKLIVQVTNDLAEA 193
A + PG V E+ ++ + ++ +
Sbjct: 135 AGLEGPGRVKLLGDGEIELENIDPSGKKFALEVVDV 170
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET:
ANP; 2.80A {Synechocystis SP}
Length = 473
Score = 27.9 bits (63), Expect = 7.1
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Query: 87 LNEVVEALESDPEFRKKLENASEADIRS---GKIAQELEYVNHQV 128
L +EALE D EF S + S K+ E+ + +
Sbjct: 418 LEAALEALEKDHEFLTGTGVFSPDFVESWIEYKLDNEVNPMRLRP 462
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type
four-helix bundle, metal binding protein; NMR {Rattus
norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A
2l0p_A 2jpt_A
Length = 93
Score = 26.3 bits (58), Expect = 8.0
Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 11/58 (18%)
Query: 348 EEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
+E+K L EL + + + + KE D N D + ++EF+ +
Sbjct: 31 KELKDLLQTELSSFLDVQKDADAV-----------DKIMKELDENGDGEVDFQEFVVL 77
>2bvc_A Glutamine synthetase 1; ligase, transition state mimic; HET: P3S
ADP; 2.1A {Mycobacterium tuberculosis} SCOP: d.15.9.1
d.128.1.1 PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 1hto_A*
1htq_A*
Length = 486
Score = 28.0 bits (63), Expect = 8.3
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 87 LNEVVEALESDPEFRKKLENASEADIRS---GKIAQELEYVNHQV 128
L++V++ LE+D E+ + + I + K E+E VN +
Sbjct: 431 LSDVIDRLEADHEYLTEGGVFTNDLIETWISFKRENEIEPVNIRP 475
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella
typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A*
1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Length = 468
Score = 27.9 bits (63), Expect = 8.6
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 17/58 (29%)
Query: 87 LNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTELDRLR 144
L E + AL+ D EF K ++ I + Y+ L+R E DR+R
Sbjct: 414 LEEALNALDLDREFLKAGGVFTDEAIDA--------YI---------ALRREEDDRVR 454
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB:
1mr8_A
Length = 93
Score = 25.9 bits (57), Expect = 9.9
Identities = 12/59 (20%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 347 EEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
+ ++ +L K+ + P + ++ + FKE D+N D ++++EFL +
Sbjct: 23 KGNFHAVYRDDLKKLLETESP--QYIR-----KKGADVWFKELDINTDGAVNFQEFLIL 74
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1ozo_A
Length = 95
Score = 25.9 bits (57), Expect = 10.0
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 11/58 (18%)
Query: 348 EEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEM 405
E+K+L KEL + G ++ + + + K+ D N D + + EF+
Sbjct: 31 GELKVLMEKELPGFLQSGKDKDAV-----------DKLLKDLDANGDAQVDFSEFIVF 77
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.314 0.132 0.377
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,721,017
Number of extensions: 498236
Number of successful extensions: 2112
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1925
Number of HSP's successfully gapped: 338
Length of query: 476
Length of database: 6,701,793
Length adjustment: 97
Effective length of query: 379
Effective length of database: 3,993,456
Effective search space: 1513519824
Effective search space used: 1513519824
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (26.4 bits)