Diaphorina citri psyllid: psy10339


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470------
MLPNIGNTATSMTLKLFYLTLCIIYLHQFINALPVQQKQPSPQRFADEEFDKMTANESINEINNNEHHEGGNGNMAEELGIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIAQELEYVNHQVRSKLDELKRTELDRLRELAKRQYELSEGKAVPDAPGHVDHNNPHSFEINDLHKLIVQVTNDLAEADRKRRELFKEYELQKRYERDQKLSLMTDQEKEEFLKKEAEEIRKRKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQEQVYSQAEVEAYERQRQAEVDRLVREGKIPSIPPQYAHYGHRRPSRAIQNRLDR
ccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHccc
*******TATSMTLKLFYLTLCIIYLHQFINALP********************************************LGIEYNRYLNEVVEALESDP************************Y**************************************************FEINDLHKLIVQVTNDLA*******************************************************************************FNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKM********************************DHLDGNHVWDEEEVKMLFLKELD******************************DVNRDRLISWEEFLEMT**********************************************************************
xxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLPNIGNTATSMTLKLFYLTLCIIYLHQFINALPVQQKQPSPQRFADEEFDKMTANESINEINNNEHHEGGNGNMAEELGIEYNRYLNEVVEALESDPEFRKKLENASEADIRSGKIxxxxxxxxxxxxxxxxxxxxxELDRLRELAKRQYELSEGKAVPDAPGHVDHNNPHSFExxxxxxxxxxxxxxxxxxxxxxxxxxxxYELQKRYERDQKLSxxxxxxxxxxxxxxxxxxxxxKSNIDKADVHHPGSKKQLEEVWQEQDHMGNTEFNPKAFFAMHDLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDHLDGNHVWDEEEVKMLFLKELDKMYKEGMPQNDLMERAEEMERMREHVFKEADVNRDRLISWEEFLEMTRRQEFNQDPGWKPIDQEQVYSQAEVEAYERQRQAEVDRLVREGKIPSIPPQYAHYGHRRPSRAIQNRLDR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Nucleobindin-2 Calcium-binding protein. May have a role in calcium homeostasis.confidentP81117

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005615 [CC]extracellular spaceprobableGO:0005575, GO:0005576, GO:0044421
GO:0005797 [CC]Golgi medial cisternaprobableGO:0005795, GO:0005794, GO:0031985, GO:0031984, GO:0043231, GO:0043229, GO:0044464, GO:0044444, GO:0005623, GO:0005737, GO:0044446, GO:0044431, GO:0005575, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1SNL, chain A
Confidence level:very confident
Coverage over the Query: 256-315,349,374-411
View the alignment between query and template
View the model in PyMOL
Template: 3A4U, chain B
Confidence level:very confident
Coverage over the Query: 308-310,321-355,373-404
View the alignment between query and template
View the model in PyMOL
Template: 2BE4, chain A
Confidence level:very confident
Coverage over the Query: 165-191,216-410
View the alignment between query and template
View the model in PyMOL
Template: 2BE4, chain A
Confidence level:very confident
Coverage over the Query: 217-312,324-437
View the alignment between query and template
View the model in PyMOL
Template: 1IJ5, chain A
Confidence level:confident
Coverage over the Query: 163-301,324-408
View the alignment between query and template
View the model in PyMOL
Template: 4FXW, chain B
Confidence level:probable
Coverage over the Query: 423-472
View the alignment between query and template
View the model in PyMOL