Your job contains 1 sequence.
>psy10341
MWTLSHDRLGQFSLTTKGHGECVKFVRDLNVPLLVLGGGGLGQFSLTTKGHGECVKFVRD
LNVPLLVLGGGGYTLRNVARCWTYETSLLVNEEISNDIPDSLYKDFFQPDYNLHPEFVHK
HDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRDIGAVLDEMDPDIKNPQL
EEDKRVDPANEFYDGDNDQDAPDTEMSWGLLQP
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10341
(213 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0025825 - symbol:Hdac3 "Histone deacetylase 3" spe... 478 1.6e-45 1
UNIPROTKB|F1N0W0 - symbol:HDAC3 "Uncharacterized protein"... 354 5.7e-36 2
UNIPROTKB|F1NH59 - symbol:HDAC3 "Histone deacetylase" spe... 382 2.4e-35 1
UNIPROTKB|P56520 - symbol:HDAC3 "Histone deacetylase 3" s... 382 2.4e-35 1
ZFIN|ZDB-GENE-040426-847 - symbol:hdac3 "histone deacetyl... 382 2.4e-35 1
UNIPROTKB|E2R792 - symbol:HDAC3 "Histone deacetylase" spe... 381 3.1e-35 1
UNIPROTKB|O15379 - symbol:HDAC3 "Histone deacetylase 3" s... 381 3.1e-35 1
UNIPROTKB|F2Z4Z6 - symbol:HDAC3 "Histone deacetylase" spe... 381 3.1e-35 1
RGD|619977 - symbol:Hdac3 "histone deacetylase 3" species... 381 3.1e-35 1
UNIPROTKB|D4AEB0 - symbol:Hdac3 "Histone deacetylase" spe... 381 3.1e-35 1
UNIPROTKB|Q6P6W3 - symbol:Hdac3 "Histone deacetylase 3" s... 381 3.1e-35 1
MGI|MGI:1343091 - symbol:Hdac3 "histone deacetylase 3" sp... 380 4.0e-35 1
TAIR|locus:2098115 - symbol:HDA9 "histone deacetylase 9" ... 319 1.2e-28 1
TAIR|locus:2076053 - symbol:hda17 "histone deacetylase 17... 308 1.7e-27 1
FB|FBgn0015805 - symbol:Rpd3 "Rpd3" species:7227 "Drosoph... 310 3.1e-27 1
UNIPROTKB|F1SV89 - symbol:LOC100521667 "Histone deacetyla... 299 1.5e-26 1
TAIR|locus:2098105 - symbol:hda10 "histone deacetylase 10... 272 3.1e-26 2
DICTYBASE|DDB_G0270338 - symbol:hdaB "type-1 histone deac... 296 3.2e-26 1
UNIPROTKB|Q32PJ8 - symbol:HDAC1 "Histone deacetylase 1" s... 299 3.5e-26 1
MGI|MGI:108086 - symbol:Hdac1 "histone deacetylase 1" spe... 299 3.5e-26 1
RGD|619975 - symbol:Hdac1l "histone deacetylase 1-like" s... 299 3.5e-26 1
UNIPROTKB|I3LG31 - symbol:LOC100622482 "Histone deacetyla... 299 3.8e-26 1
UNIPROTKB|F5GXM1 - symbol:HDAC1 "Histone deacetylase 1" s... 294 5.2e-26 1
WB|WBGene00001836 - symbol:hda-3 species:6239 "Caenorhabd... 296 6.0e-26 1
UNIPROTKB|Q13547 - symbol:HDAC1 "Histone deacetylase 1" s... 294 1.3e-25 1
UNIPROTKB|P56517 - symbol:HDAC1 "Histone deacetylase 1" s... 292 2.1e-25 1
WB|WBGene00001834 - symbol:hda-1 species:6239 "Caenorhabd... 291 2.1e-25 1
UNIPROTKB|O17695 - symbol:hda-1 "Histone deacetylase 1" s... 291 2.1e-25 1
UNIPROTKB|F6X8F5 - symbol:HDAC1 "Histone deacetylase" spe... 289 4.8e-25 1
UNIPROTKB|E2R692 - symbol:HDAC1 "Uncharacterized protein"... 289 5.0e-25 1
UNIPROTKB|J9NUI0 - symbol:HDAC1 "Histone deacetylase" spe... 289 5.1e-25 1
UNIPROTKB|P56518 - symbol:HDAC1 "Histone deacetylase 1" s... 290 7.5e-25 1
RGD|1309799 - symbol:Hdac1 "histone deacetylase 1" specie... 282 9.7e-25 1
UNIPROTKB|J9P9H5 - symbol:HDAC2 "Histone deacetylase" spe... 275 1.4e-23 1
UNIPROTKB|B3KRS5 - symbol:HDAC2 "Histone deacetylase" spe... 275 1.4e-23 1
UNIPROTKB|F1NM39 - symbol:HDAC2 "Histone deacetylase" spe... 275 1.8e-23 1
UNIPROTKB|P56519 - symbol:HDAC2 "Histone deacetylase 2" s... 275 1.8e-23 1
UNIPROTKB|F1PR63 - symbol:HDAC2 "Histone deacetylase" spe... 275 1.8e-23 1
UNIPROTKB|Q92769 - symbol:HDAC2 "Histone deacetylase 2" s... 275 1.8e-23 1
UNIPROTKB|F1RZK8 - symbol:HDAC2 "Histone deacetylase" spe... 275 2.8e-23 1
UNIPROTKB|J3KPW7 - symbol:HDAC2 "Histone deacetylase 2" s... 275 3.3e-23 1
ZFIN|ZDB-GENE-020419-32 - symbol:hdac1 "histone deacetyla... 271 4.8e-23 1
MGI|MGI:1097691 - symbol:Hdac2 "histone deacetylase 2" sp... 271 5.1e-23 1
DICTYBASE|DDB_G0268024 - symbol:hdaA "type-1 histone deac... 269 9.0e-23 1
CGD|CAL0004384 - symbol:HOS2 species:5476 "Candida albica... 250 1.9e-22 2
UNIPROTKB|Q5A839 - symbol:HOS2 "Histone deacetylase" spec... 250 1.9e-22 2
UNIPROTKB|F1M4V8 - symbol:F1M4V8 "Histone deacetylase" sp... 264 2.5e-22 1
ASPGD|ASPL0000073195 - symbol:rpdA species:162425 "Emeric... 266 4.7e-22 1
POMBASE|SPAC3G9.07c - symbol:hos2 "histone deacetylase (c... 260 5.0e-22 1
UNIPROTKB|F1MFZ7 - symbol:HDAC2 "Histone deacetylase" spe... 261 6.5e-22 1
POMBASE|SPBC36.05c - symbol:clr6 "histone deacetylase (cl... 247 1.0e-20 1
SGD|S000003162 - symbol:HOS2 "Histone deacetylase and sub... 247 1.7e-20 1
TAIR|locus:2120948 - symbol:HD1 "AT4G38130" species:3702 ... 248 1.9e-20 1
CGD|CAL0005111 - symbol:RPD3 species:5476 "Candida albica... 241 9.8e-20 1
UNIPROTKB|Q5A209 - symbol:RPD3 "Histone deacetylase" spec... 241 9.8e-20 1
CGD|CAL0005608 - symbol:RPD31 species:5476 "Candida albic... 239 2.6e-19 1
UNIPROTKB|Q5ADP0 - symbol:RPD31 "Potential Sin3.Rpd3 hist... 239 2.6e-19 1
TAIR|locus:2162017 - symbol:HDA6 "histone deacetylase 6" ... 236 3.3e-19 1
TAIR|locus:2157111 - symbol:HDA7 "histone deacetylase7" s... 227 2.0e-18 1
SGD|S000005274 - symbol:RPD3 "Histone deacetylase" specie... 217 3.1e-17 1
WB|WBGene00001835 - symbol:hda-2 species:6239 "Caenorhabd... 212 1.7e-16 1
ASPGD|ASPL0000013866 - symbol:hosA species:162425 "Emeric... 200 3.0e-15 1
RGD|619976 - symbol:Hdac2 "histone deacetylase 2" species... 171 5.6e-13 1
UNIPROTKB|F1NFY6 - symbol:HDAC8 "Histone deacetylase" spe... 147 1.0e-09 1
UNIPROTKB|B4DQE7 - symbol:HDAC8 "cDNA FLJ58211, highly si... 140 1.1e-09 1
ZFIN|ZDB-GENE-040426-2772 - symbol:hdac8 "histone deacety... 150 3.3e-09 1
MGI|MGI:1917565 - symbol:Hdac8 "histone deacetylase 8" sp... 141 4.7e-09 1
RGD|1562895 - symbol:Hdac8 "histone deacetylase 8" specie... 141 4.7e-09 1
UNIPROTKB|Q9BY41 - symbol:HDAC8 "Histone deacetylase 8" s... 140 6.0e-09 1
UNIPROTKB|G3MYR9 - symbol:HDAC8 "Histone deacetylase" spe... 139 1.6e-08 1
UNIPROTKB|Q0VCB2 - symbol:HDAC8 "Histone deacetylase 8" s... 139 1.6e-08 1
UNIPROTKB|J9P5B2 - symbol:HDAC8 "Histone deacetylase" spe... 139 1.9e-08 1
UNIPROTKB|E7EWI8 - symbol:HDAC3 "Histone deacetylase 3" s... 119 1.8e-07 1
UNIPROTKB|F1RPM1 - symbol:LOC100625846 "Uncharacterized p... 109 2.7e-06 1
UNIPROTKB|A6NGJ7 - symbol:HDAC8 "Histone deacetylase 8" s... 118 1.9e-05 1
UNIPROTKB|E2RQK6 - symbol:HDAC8 "Histone deacetylase" spe... 114 0.00015 1
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 94/165 (56%), Positives = 114/165 (69%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
FSL+TKGHGECVKFV++ YTLRNVARCWT+ETSLLV+++I ND+P + Y
Sbjct: 274 FSLSTKGHGECVKFVKELNVPTLVVGGGGYTLRNVARCWTHETSLLVDQDIENDLPATEY 333
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
DFF PD+ LHPE + DNANSKQYLELI K VY+NLKM SPSVQM DV +
Sbjct: 334 YDFFAPDFTLHPEINSRQDNANSKQYLELIVKHVYENLKMCQHSPSVQMVQTPPDVDLEE 393
Query: 164 IGAVLDEM-DPDIKNPQLEEDKRVDPANEFYDGDNDQDAPDTEMS 207
+ + +E DPD++ +EDK VD NEFYDGD DQD PD+ S
Sbjct: 394 LRSNREEASDPDVRISVADEDKLVDAKNEFYDGDQDQDKPDSAES 438
Score = 125 (49.1 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 23/30 (76%), Positives = 28/30 (93%)
Query: 3 TLSHDRLGQFSLTTKGHGECVKFVRDLNVP 32
+L+ DRLG FSL+TKGHGECVKFV++LNVP
Sbjct: 265 SLAGDRLGCFSLSTKGHGECVKFVKELNVP 294
>UNIPROTKB|F1N0W0 [details] [associations]
symbol:HDAC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0000122 GO:GO:0032922 GO:GO:0046329
GO:GO:0031490 GO:GO:0005876 GO:GO:0016575 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 OMA:GGECVEY
GeneTree:ENSGT00530000062889 GO:GO:0033558 EMBL:DAAA02020441
EMBL:DAAA02020442 IPI:IPI00688242 Ensembl:ENSBTAT00000023086
Uniprot:F1N0W0
Length = 163
Score = 354 (129.7 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 71/156 (45%), Positives = 100/156 (64%)
Query: 52 GECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLYKDFFQPDY 111
GECV++V+ YT+RNVARCWTYETSLLV E IS ++P S Y ++F PD+
Sbjct: 12 GECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDF 71
Query: 112 NLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRDIGAVLDEM 171
LHP+ + +N NS+QYL+ I +T+++NLKM+ +PSVQ+ D+ D+ T D DE
Sbjct: 72 TLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDR---TDEA 128
Query: 172 DPDIKNPQLEEDKRVDPANEFYDGDNDQDAP-DTEM 206
D + + P+ E R + NEFYDGD+D D D E+
Sbjct: 129 DAEERGPE-ENYSRPEAPNEFYDGDHDNDKESDVEI 163
Score = 50 (22.7 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 20 GECVKFVRDLNVP 32
GECV++V+ N+P
Sbjct: 12 GECVEYVKSFNIP 24
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 75/164 (45%), Positives = 109/164 (66%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GHGECV++V+ YT+RNVARCWTYETSLLV+E IS ++P S Y
Sbjct: 269 FNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSEY 328
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LHP+ + +N NS+QYL+ I +T+++NLKM+ +PSVQ+ D+ D+ + D
Sbjct: 329 FEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLLSYD 388
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDAP-DTEM 206
DE DP+ + + E R + ANEFYDGD+D D D E+
Sbjct: 389 R---TDEPDPEERGSE-ENYSRPEAANEFYDGDHDNDKESDVEI 428
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 75/164 (45%), Positives = 109/164 (66%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GHGECV++V+ YT+RNVARCWTYETSLLV+E IS ++P S Y
Sbjct: 269 FNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSEY 328
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LHP+ + +N NS+QYL+ I +T+++NLKM+ +PSVQ+ D+ D+ + D
Sbjct: 329 FEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLLSYD 388
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDAP-DTEM 206
DE DP+ + + E R + ANEFYDGD+D D D E+
Sbjct: 389 R---TDEPDPEERGSE-ENYSRPEAANEFYDGDHDNDKESDVEI 428
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 76/164 (46%), Positives = 110/164 (67%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GHGECV+FV+ YT+RNVARCWT+ETSLLV E IS+++P S Y
Sbjct: 269 FNLSIRGHGECVEFVKGFKIPLLVLGGGGYTVRNVARCWTFETSLLVEESISDELPYSEY 328
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LHP+ + +N NS+QYLE I +TV++NLKM+ +PSVQ++D+ D+ + +
Sbjct: 329 FEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIRDVPSDLLSYE 388
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDAP-DTEM 206
DE DP+ + + E R + ANEFYDGD+D D D E+
Sbjct: 389 RP---DEADPEERGSE-ENFSRPEAANEFYDGDHDHDKESDVEI 428
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 75/164 (45%), Positives = 107/164 (65%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GHGECV++V+ YT+RNVARCWTYETSLLV E IS ++P S Y
Sbjct: 269 FNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEY 328
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LHP+ + +N NS+QYL+ I +T+++NLKM+ +PSVQ+ D+ D+ T D
Sbjct: 329 FEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYD 388
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDAP-DTEM 206
DE D + + P+ E R + NEFYDGD+D D D E+
Sbjct: 389 R---TDEADAEERGPE-ENYSRPEAPNEFYDGDHDNDKESDVEI 428
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 75/164 (45%), Positives = 107/164 (65%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GHGECV++V+ YT+RNVARCWTYETSLLV E IS ++P S Y
Sbjct: 269 FNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEY 328
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LHP+ + +N NS+QYL+ I +T+++NLKM+ +PSVQ+ D+ D+ T D
Sbjct: 329 FEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYD 388
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDAP-DTEM 206
DE D + + P+ E R + NEFYDGD+D D D E+
Sbjct: 389 R---TDEADAEERGPE-ENYSRPEAPNEFYDGDHDNDKESDVEI 428
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 75/164 (45%), Positives = 107/164 (65%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GHGECV++V+ YT+RNVARCWTYETSLLV E IS ++P S Y
Sbjct: 269 FNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEY 328
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LHP+ + +N NS+QYL+ I +T+++NLKM+ +PSVQ+ D+ D+ T D
Sbjct: 329 FEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYD 388
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDAP-DTEM 206
DE D + + P+ E R + NEFYDGD+D D D E+
Sbjct: 389 R---TDEADAEERGPE-ENYSRPEAPNEFYDGDHDNDKESDVEI 428
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 75/164 (45%), Positives = 107/164 (65%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GHGECV++V+ YT+RNVARCWTYETSLLV E IS ++P S Y
Sbjct: 269 FNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEY 328
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LHP+ + +N NS+QYL+ I +T+++NLKM+ +PSVQ+ D+ D+ T D
Sbjct: 329 FEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYD 388
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDAP-DTEM 206
DE D + + P+ E R + NEFYDGD+D D D E+
Sbjct: 389 R---TDEADAEERGPE-ENYSRPEAPNEFYDGDHDNDKESDVEI 428
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 75/164 (45%), Positives = 107/164 (65%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GHGECV++V+ YT+RNVARCWTYETSLLV E IS ++P S Y
Sbjct: 269 FNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEY 328
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LHP+ + +N NS+QYL+ I +T+++NLKM+ +PSVQ+ D+ D+ T D
Sbjct: 329 FEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYD 388
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDAP-DTEM 206
DE D + + P+ E R + NEFYDGD+D D D E+
Sbjct: 389 R---TDEADAEERGPE-ENYSRPEAPNEFYDGDHDNDKESDVEI 428
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 75/164 (45%), Positives = 107/164 (65%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GHGECV++V+ YT+RNVARCWTYETSLLV E IS ++P S Y
Sbjct: 269 FNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEY 328
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LHP+ + +N NS+QYL+ I +T+++NLKM+ +PSVQ+ D+ D+ T D
Sbjct: 329 FEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYD 388
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDAP-DTEM 206
DE D + + P+ E R + NEFYDGD+D D D E+
Sbjct: 389 R---TDEADAEERGPE-ENYSRPEAPNEFYDGDHDNDKESDVEI 428
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 73/157 (46%), Positives = 104/157 (66%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GHGECV++V+ YT+RNVARCWTYETSLLV E IS ++P S Y
Sbjct: 269 FNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEY 328
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LHP+ + +N NS+QYL+ I +T+++NLKM+ +PSVQ+ D+ D+ T D
Sbjct: 329 FEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYD 388
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQD 200
DE D + + P+ E R + NEFYDGD+D D
Sbjct: 389 R---TDEADAEERGPE-ENYSRPEAPNEFYDGDHDND 421
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 62/158 (39%), Positives = 94/158 (59%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ GH ECVKFV+ YT NVARCWT ET +L++ E+ N+IP++ Y
Sbjct: 271 FNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENDY 330
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
+F PD++L H +N N+K Y+ I + +NL+ + +PSVQMQ++ D + D
Sbjct: 331 IKYFAPDFSLKIPGGHI-ENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPD 389
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDA 201
DE +PD++ Q DK++ +E++DGDND DA
Sbjct: 390 FDE--DEQNPDVRADQRSRDKQIQRDDEYFDGDNDNDA 425
>TAIR|locus:2076053 [details] [associations]
symbol:hda17 "histone deacetylase 17" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0016575
"histone deacetylation" evidence=IEA] INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL353818 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 KO:K06067 HSSP:Q9BY41 HOGENOM:HOG000112868
ProtClustDB:CLSN2684485 EMBL:BT014712 IPI:IPI00519666 PIR:T48929
RefSeq:NP_190035.1 UniGene:At.66492 ProteinModelPortal:Q9LXN8
SMR:Q9LXN8 PaxDb:Q9LXN8 EnsemblPlants:AT3G44490.1 GeneID:823574
KEGG:ath:AT3G44490 TAIR:At3g44490 InParanoid:Q9LXN8 OMA:GGECVEY
PhylomeDB:Q9LXN8 Genevestigator:Q9LXN8 Uniprot:Q9LXN8
Length = 158
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 61/158 (38%), Positives = 92/158 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
FS+ GH ECVKFV+ YT NVARCWT ET +L++ E+ N+I ++ Y
Sbjct: 3 FSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISENDY 62
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
+F PD++L H +N N+K Y+ I + +NL+ + +PSVQMQ++ D + D
Sbjct: 63 IKYFAPDFSLKIPGGHI-ENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPD 121
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDA 201
DE +PD++ Q DK++ +E++DGDND DA
Sbjct: 122 FDE--DEQNPDVRVDQRSRDKQIQRDDEYFDGDNDNDA 157
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 310 (114.2 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 61/155 (39%), Positives = 96/155 (61%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGHG+CV+FV+ YT+RNV+RCWTYETS+ + EI+N++P + Y
Sbjct: 272 FNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANELPYNDY 331
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YLE I +++NL+M+ +P VQ+Q + D D
Sbjct: 332 FEYFGPDFKLHIS-PSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPEDAIN-D 389
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
D++D D + PQ ++DKR+ P NE+ D +++
Sbjct: 390 ESDDEDKVDKDDRLPQSDKDKRIVPENEYSDSEDE 424
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 61/155 (39%), Positives = 90/155 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+FV+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 184 FNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDY 243
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D +
Sbjct: 244 FEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEE 302
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G DE DPD + DKR+ EF D D +
Sbjct: 303 SGDE-DEEDPDKRISICSSDKRIACEEEFSDSDEE 336
>TAIR|locus:2098105 [details] [associations]
symbol:hda10 "histone deacetylase 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 KO:K06067 EMBL:AL138652 IPI:IPI00526042
PIR:T47441 RefSeq:NP_190052.1 UniGene:At.53729 HSSP:Q9BY41
ProteinModelPortal:Q9M1N8 SMR:Q9M1N8 EnsemblPlants:AT3G44660.1
GeneID:823592 KEGG:ath:AT3G44660 TAIR:At3g44660
HOGENOM:HOG000112868 InParanoid:Q9M1N8 OMA:WQLERTK PhylomeDB:Q9M1N8
ProtClustDB:CLSN2684485 Genevestigator:Q9M1N8 Uniprot:Q9M1N8
Length = 142
Score = 272 (100.8 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 52/129 (40%), Positives = 81/129 (62%)
Query: 73 YTLRNVARCWTYETSLLVNEEISNDIPDSLYKDFFQPDYNLHPEFVHKHDNANSKQYLEL 132
YT NVARCWT ET +L++ E+ N+IP++ Y +F PD++L H +N N+K Y+
Sbjct: 16 YTKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHI-ENLNTKSYISS 74
Query: 133 ITKTVYDNLKMVAFSPSVQMQDMIGDVFTRDIGAVLDEMDPDIKNPQLEEDKRVDPANEF 192
I + +NL+ + +PSVQMQ++ D + D DE +PD++ Q DK++ +E+
Sbjct: 75 IKVQILENLRYIQHAPSVQMQEVPPDFYIPDFDE--DEQNPDVRVDQRSRDKQIQRDDEY 132
Query: 193 YDGDNDQDA 201
+DGDND DA
Sbjct: 133 FDGDNDNDA 141
Score = 39 (18.8 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 12 FSLTTKGHGECVKFVRDLNV 31
FS+ GH EC + ++ NV
Sbjct: 3 FSMLFTGHAECGGYTKE-NV 21
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 61/152 (40%), Positives = 92/152 (60%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH ECV+FV+ YT+RNVARCWTYETS+ V+ E++N++P + Y
Sbjct: 278 FNLTIKGHAECVRFVKSFNIPTLVLGGGGYTVRNVARCWTYETSVCVDTEVNNELPYNDY 337
Query: 104 KDFFQPDYNLHPEFV---HKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVF 160
F+ PD+ L P++ K++NAN+K YLE + + +NL+++ ++PSVQ+QD+ D+
Sbjct: 338 IQFYSPDFQLIPDYTGLPFKYENANTKSYLESLRIKILENLRILQWAPSVQIQDVPPDIM 397
Query: 161 TRDIGAVLDEMDPDIKNPQLEEDKRVDPANEF 192
D + D D K DKR N+F
Sbjct: 398 PIDF-----DRDEDSKENM---DKRKKKHNDF 421
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 299 (110.3 bits), Expect = 3.5e-26, P = 3.5e-26
Identities = 61/155 (39%), Positives = 90/155 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+FV+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 274 FNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDY 333
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D +
Sbjct: 334 FEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEE 392
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G DE DPD + DKR+ EF D D +
Sbjct: 393 SGDE-DEEDPDKRISICSSDKRIACEEEFSDSDEE 426
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 299 (110.3 bits), Expect = 3.5e-26, P = 3.5e-26
Identities = 61/155 (39%), Positives = 90/155 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+FV+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 274 FNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDY 333
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D +
Sbjct: 334 FEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEE 392
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G DE DPD + DKR+ EF D D +
Sbjct: 393 SGDE-DEEDPDKRISICSSDKRIACEEEFSDSDEE 426
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 299 (110.3 bits), Expect = 3.5e-26, P = 3.5e-26
Identities = 61/155 (39%), Positives = 90/155 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+FV+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 274 FNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDY 333
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D +
Sbjct: 334 FEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEE 392
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G DE DPD + DKR+ EF D D +
Sbjct: 393 SGDE-DEEDPDKRISICSSDKRIACEEEFSDSDEE 426
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 299 (110.3 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 61/155 (39%), Positives = 90/155 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+FV+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 281 FNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDY 340
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D +
Sbjct: 341 FEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEE 399
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G DE DPD + DKR+ EF D D +
Sbjct: 400 SGDE-DEEDPDKRISICSSDKRIACEEEFSDSDEE 433
>UNIPROTKB|F5GXM1 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 HGNC:HGNC:4852
ChiTaRS:HDAC1 EMBL:AL109945 IPI:IPI01010320
ProteinModelPortal:F5GXM1 SMR:F5GXM1 PRIDE:F5GXM1
Ensembl:ENST00000373541 UCSC:uc001bvc.1 ArrayExpress:F5GXM1
Bgee:F5GXM1 Uniprot:F5GXM1
Length = 289
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 60/155 (38%), Positives = 90/155 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+FV+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 81 FNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDY 140
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D +
Sbjct: 141 FEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEE 199
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G DE DPD + DKR+ EF D + +
Sbjct: 200 SGDE-DEDDPDKRISICSSDKRIACEEEFSDSEEE 233
Score = 100 (40.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 3 TLSHDRLGQFSLTTKGHGECVKFVRDLNVP 32
+LS DRLG F+LT KGH +CV+FV+ N+P
Sbjct: 72 SLSGDRLGCFNLTIKGHAKCVEFVKSFNLP 101
Score = 41 (19.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 195 GDNDQDAPDTEMS 207
GD D+D PD +S
Sbjct: 201 GDEDEDDPDKRIS 213
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 296 (109.3 bits), Expect = 6.0e-26, P = 6.0e-26
Identities = 59/160 (36%), Positives = 94/160 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LTT GHG+CV++++ YT+RNV+RCW YET++ +N+E+S+D+P Y
Sbjct: 273 FNLTTYGHGKCVEYMKSFNVPLLLVGGGGYTIRNVSRCWLYETAIALNQEVSDDLPLHDY 332
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGD----V 159
D+F PDY LH + + N N+ ++++ + +NLK + PSVQMQ + V
Sbjct: 333 FDYFIPDYKLHIKPLAALSNFNTPEFIDQTIVALLENLKQLPHVPSVQMQSISTSCDSIV 392
Query: 160 FTRDIGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQ 199
T D + D + D++ Q EED +V+ + EFYDG +
Sbjct: 393 KTFDEKLIRDHQNDDVRVTQFEEDVQVEDSAEFYDGQEPE 432
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 294 (108.6 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 60/155 (38%), Positives = 90/155 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+FV+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 274 FNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDY 333
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D +
Sbjct: 334 FEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEE 392
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G DE DPD + DKR+ EF D + +
Sbjct: 393 SGDE-DEDDPDKRISICSSDKRIACEEEFSDSEEE 426
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 292 (107.8 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 59/155 (38%), Positives = 91/155 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+FV+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 274 FNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDY 333
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D D
Sbjct: 334 FEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAVQED 392
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G +E DP+ + DKR+ EF D +++
Sbjct: 393 SGDE-EEEDPEKRISIRNSDKRISCDEEFSDSEDE 426
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 291 (107.5 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 61/159 (38%), Positives = 88/159 (55%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGHGEC +F R YT RNVARCWTYETS+ V++E+ N++P + Y
Sbjct: 278 FNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELPYNDY 337
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFT-- 161
++F P+Y LH E + N NS L + V NL+ + F PSVQM+ + D +
Sbjct: 338 FEYFGPNYRLHIESSNAA-NENSSDMLAKLQTDVIANLEQLTFVPSVQMRPIPEDALSAL 396
Query: 162 RDIGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQD 200
D + D+ +PD + P D + +FYDG+ + D
Sbjct: 397 NDDSLIADQANPDKRLPPQITDGMIQDDGDFYDGEREGD 435
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 291 (107.5 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 61/159 (38%), Positives = 88/159 (55%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGHGEC +F R YT RNVARCWTYETS+ V++E+ N++P + Y
Sbjct: 278 FNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELPYNDY 337
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFT-- 161
++F P+Y LH E + N NS L + V NL+ + F PSVQM+ + D +
Sbjct: 338 FEYFGPNYRLHIESSNAA-NENSSDMLAKLQTDVIANLEQLTFVPSVQMRPIPEDALSAL 396
Query: 162 RDIGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQD 200
D + D+ +PD + P D + +FYDG+ + D
Sbjct: 397 NDDSLIADQANPDKRLPPQITDGMIQDDGDFYDGEREGD 435
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 289 (106.8 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 61/156 (39%), Positives = 90/156 (57%)
Query: 44 FSLTTK-GHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSL 102
F+LT K GH +CV+FV+ YT+RNVARCWTYET++ ++ EI N++P +
Sbjct: 274 FNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYND 333
Query: 103 YKDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTR 162
Y ++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D
Sbjct: 334 YFEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPEDAIPE 392
Query: 163 DIGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
+ G DE DPD + DKR+ EF D D +
Sbjct: 393 ESGDE-DEEDPDKRISICSSDKRIACEEEFSDSDEE 427
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 289 (106.8 bits), Expect = 5.0e-25, P = 5.0e-25
Identities = 61/156 (39%), Positives = 90/156 (57%)
Query: 44 FSLTTK-GHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSL 102
F+LT K GH +CV+FV+ YT+RNVARCWTYET++ ++ EI N++P +
Sbjct: 274 FNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYND 333
Query: 103 YKDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTR 162
Y ++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D
Sbjct: 334 YFEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPEDAIPE 392
Query: 163 DIGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
+ G DE DPD + DKR+ EF D D +
Sbjct: 393 ESGDE-DEEDPDKRISICSSDKRIACEEEFSDSDEE 427
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 289 (106.8 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 61/156 (39%), Positives = 90/156 (57%)
Query: 44 FSLTTK-GHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSL 102
F+LT K GH +CV+FV+ YT+RNVARCWTYET++ ++ EI N++P +
Sbjct: 274 FNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYND 333
Query: 103 YKDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTR 162
Y ++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D
Sbjct: 334 YFEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPEDAIPE 392
Query: 163 DIGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
+ G DE DPD + DKR+ EF D D +
Sbjct: 393 ESGDE-DEEDPDKRISICSSDKRIACEEEFSDSDEE 427
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 290 (107.1 bits), Expect = 7.5e-25, P = 7.5e-25
Identities = 57/155 (36%), Positives = 91/155 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+F++ YT+RNVARCWTYETS + EI+N++P + Y
Sbjct: 273 FNLTLKGHAKCVEFMKQYNLPLLLMGGGGYTIRNVARCWTYETSTALGVEIANELPYNDY 332
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YL+ I +Y+N++M+ +P VQMQ + D D
Sbjct: 333 FEYFGPDFKLHIS-PSNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIPEDAIPDD 391
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
A + +PD + + +DKR+ +EF D +++
Sbjct: 392 SDAEDEAENPDKRISIMAQDKRIQRDDEFSDSEDE 426
>RGD|1309799 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007492 "endoderm development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0008285 "negative regulation of
cell proliferation" evidence=IDA] [GO:0009913 "epidermal cell
differentiation" evidence=ISO] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016575 "histone
deacetylation" evidence=ISO] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0021766 "hippocampus
development" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0034599 "cellular response to oxidative stress" evidence=IDA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=ISO] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043025
"neuronal cell body" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=ISO] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=ISO] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISO] [GO:0061198 "fungiform papilla
formation" evidence=ISO] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;IMP] [GO:0070933 "histone H4 deacetylation"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] Pfam:PF00850 RGD:1309799 RGD:619975
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0045892 GO:GO:0008285
GO:GO:0043234 GO:GO:0032403 GO:GO:0042493 GO:GO:0034599
GO:GO:0043524 GO:GO:0000785 GO:GO:0070932 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF321129 IPI:IPI00201536 UniGene:Rn.123394
ProteinModelPortal:Q99PA2 STRING:Q99PA2 InParanoid:Q99PA2
OMA:KCIACEE Genevestigator:Q99PA2 Uniprot:Q99PA2
Length = 256
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 59/155 (38%), Positives = 87/155 (56%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+FV+ YT+ NVARCWTYET++ ++ EI N++P + Y
Sbjct: 50 FNLTIKGHAKCVEFVKSFNLPMLMLGGDGYTIHNVARCWTYETAVALDTEIPNELPYNDY 109
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YLE I + +++NL+M+ +P VQMQ + D +
Sbjct: 110 FEYFGPDFKLHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHTPGVQMQAIPEDAIPEE 168
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G DE DPD DK + EF D D +
Sbjct: 169 SGDE-DEEDPDKPISICSSDKCIACEEEFPDSDEE 202
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 275 (101.9 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 58/155 (37%), Positives = 89/155 (57%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+ V+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 245 FNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDY 304
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +Y+E I + +++NL+M+ +P VQMQ + D D
Sbjct: 305 FEYFGPDFKLHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHED 363
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G D DPD + DKR+ EF D +++
Sbjct: 364 SGDE-DGEDPDKRISIRASDKRIACDEEFSDSEDE 397
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 275 (101.9 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 58/155 (37%), Positives = 89/155 (57%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+ V+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 245 FNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDY 304
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +Y+E I + +++NL+M+ +P VQMQ + D D
Sbjct: 305 FEYFGPDFKLHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHED 363
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G D DPD + DKR+ EF D +++
Sbjct: 364 SGDE-DGEDPDKRISIRASDKRIACDEEFSDSEDE 397
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 275 (101.9 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 58/155 (37%), Positives = 89/155 (57%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+ V+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 275 FNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDY 334
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +Y+E I + +++NL+M+ +P VQMQ + D D
Sbjct: 335 FEYFGPDFKLHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHED 393
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G D DPD + DKR+ EF D +++
Sbjct: 394 SGDE-DGEDPDKRISIRASDKRIACDEEFSDSEDE 427
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 275 (101.9 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 58/155 (37%), Positives = 89/155 (57%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+ V+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 275 FNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDY 334
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +Y+E I + +++NL+M+ +P VQMQ + D D
Sbjct: 335 FEYFGPDFKLHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHED 393
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G D DPD + DKR+ EF D +++
Sbjct: 394 SGDE-DGEDPDKRISIRASDKRIACDEEFSDSEDE 427
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 275 (101.9 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 58/155 (37%), Positives = 89/155 (57%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+ V+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 275 FNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDY 334
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +Y+E I + +++NL+M+ +P VQMQ + D D
Sbjct: 335 FEYFGPDFKLHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHED 393
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G D DPD + DKR+ EF D +++
Sbjct: 394 SGDE-DGEDPDKRISIRASDKRIACDEEFSDSEDE 427
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 275 (101.9 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 58/155 (37%), Positives = 89/155 (57%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+ V+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 275 FNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDY 334
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +Y+E I + +++NL+M+ +P VQMQ + D D
Sbjct: 335 FEYFGPDFKLHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHED 393
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G D DPD + DKR+ EF D +++
Sbjct: 394 SGDE-DGEDPDKRISIRASDKRIACDEEFSDSEDE 427
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 275 (101.9 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 58/155 (37%), Positives = 89/155 (57%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+ V+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 337 FNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDY 396
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +Y+E I + +++NL+M+ +P VQMQ + D D
Sbjct: 397 FEYFGPDFKLHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHED 455
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G D DPD + DKR+ EF D +++
Sbjct: 456 SGDE-DGEDPDKRISIRASDKRIACDEEFSDSEDE 489
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 275 (101.9 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 58/155 (37%), Positives = 89/155 (57%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+ V+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 369 FNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDY 428
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +Y+E I + +++NL+M+ +P VQMQ + D D
Sbjct: 429 FEYFGPDFKLHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHED 487
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G D DPD + DKR+ EF D +++
Sbjct: 488 SGDE-DGEDPDKRISIRASDKRIACDEEFSDSEDE 521
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 271 (100.5 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 55/155 (35%), Positives = 90/155 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV++++ YT++NVARCWT+ET++ ++ I N++P + Y
Sbjct: 275 FNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIKNVARCWTFETAVALDSTIPNELPYNDY 334
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH + N N+ YLE I + +++NL+M+ +P VQMQ + D D
Sbjct: 335 FEYFGPDFKLHISPFNM-TNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAVQED 393
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G +E DPD + DKR+ EF D +++
Sbjct: 394 SGD--EEDDPDKRISIRAHDKRIACDEEFSDSEDE 426
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 271 (100.5 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 57/155 (36%), Positives = 88/155 (56%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV+ + YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 275 FNLTVKGHAKCVEVAKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDY 334
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +Y+E I + +++NL+M+ +P VQMQ + D D
Sbjct: 335 FEYFGPDFKLHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHED 393
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G D DPD + DKR+ EF D +++
Sbjct: 394 SGDE-DGEDPDKRISIRASDKRIACDEEFSDSEDE 427
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 269 (99.8 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 51/155 (32%), Positives = 89/155 (57%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT +GH +C++F++ YT++NVARCWTYETS+LV+ E+ +++P + Y
Sbjct: 269 FNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTIKNVARCWTYETSILVDSELKDELPYNDY 328
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
+++ P+Y LH + +N N+K YLE + + +NL+ + +P+ D+ D F
Sbjct: 329 LEYYGPEYRLHIT-PNNMENQNTKDYLEKLKIQLLENLRNLNHAPAAAHHDIPPDSFNYS 387
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
D+ DPD++ + + DK+V E D D +
Sbjct: 388 DDE--DDEDPDVRISEADRDKKVHHQGELSDSDEE 420
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 250 (93.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 50/139 (35%), Positives = 82/139 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L + HGECVKF++ YT RNV+R W YETS+L + + + IP+ L
Sbjct: 302 FNLNIRAHGECVKFIKSFGIPMLVVGGGGYTPRNVSRLWCYETSVLNDVNLDHKIPNYLP 361
Query: 104 K-DFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDV--F 160
D+F PDY+LHP+ + DN NSK+YL+ + T+ + ++ + +PSVQM ++ D+
Sbjct: 362 TYDWFGPDYSLHPQLDGRIDNKNSKKYLQSVQTTIMEQIRYLNHAPSVQMYEIPPDLTGL 421
Query: 161 TRDIGAVLDEMDPDIKNPQ 179
T D + E++ D++ +
Sbjct: 422 TEDEDKAIQELNEDMERDE 440
Score = 35 (17.4 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 3 TLSHDRLGQFSL 14
T+S+D L QF++
Sbjct: 112 TISNDTLAQFNI 123
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 250 (93.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 50/139 (35%), Positives = 82/139 (58%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L + HGECVKF++ YT RNV+R W YETS+L + + + IP+ L
Sbjct: 302 FNLNIRAHGECVKFIKSFGIPMLVVGGGGYTPRNVSRLWCYETSVLNDVNLDHKIPNYLP 361
Query: 104 K-DFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDV--F 160
D+F PDY+LHP+ + DN NSK+YL+ + T+ + ++ + +PSVQM ++ D+
Sbjct: 362 TYDWFGPDYSLHPQLDGRIDNKNSKKYLQSVQTTIMEQIRYLNHAPSVQMYEIPPDLTGL 421
Query: 161 TRDIGAVLDEMDPDIKNPQ 179
T D + E++ D++ +
Sbjct: 422 TEDEDKAIQELNEDMERDE 440
Score = 35 (17.4 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 3 TLSHDRLGQFSL 14
T+S+D L QF++
Sbjct: 112 TISNDTLAQFNI 123
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 264 (98.0 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 59/155 (38%), Positives = 86/155 (55%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+LT KGH +CV FV+ YT+ NVARCWTYET++ ++ EI N++P + Y
Sbjct: 255 FNLTIKGH-KCVGFVKSFNLPMLMLRGGGYTIHNVARCWTYETAVTLDTEIPNELPYNDY 313
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +YLE I + +++NL+M+ P VQMQ + D +
Sbjct: 314 FEYFGPDFKLHIS-PSNTTNQNTNEYLE-IKQRLFENLRMLPHVPEVQMQAIPEDAIPEE 371
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G DE DPD + DK + EF D D +
Sbjct: 372 SGDE-DEEDPDKRISICSSDKCIACEEEFSDSDEE 405
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 266 (98.7 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 60/167 (35%), Positives = 94/167 (56%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GH CVK+V+ YT+RNVAR W +ET +LV + + +++P + Y
Sbjct: 291 FNLSMRGHANCVKYVKSFNLPTLIVGGGGYTMRNVARTWAFETGILVGDNLGSELPYNDY 350
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDM----IGDV 159
++F PDY L DNAN+++YL+ I V +NLK AF+PSVQM D+ + D
Sbjct: 351 YEYFAPDYELDVR-PSNMDNANTREYLDKIRTQVVENLKRTAFAPSVQMTDVPREPLVDG 409
Query: 160 FTRDIGAVLDEMDPDI-KNPQLEE---DKRVDPANEFYDG-DNDQDA 201
+ A LD++D D K+ + + D+ V+ E D D D++A
Sbjct: 410 MDDEAEAALDDLDEDENKDKRFTKRRFDQYVEKPGELSDSEDEDENA 456
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 260 (96.6 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 58/145 (40%), Positives = 82/145 (56%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIP-DSL 102
F+L+ HGECV+F R YTLRNVAR W YETS+ VNE+I +++P ++L
Sbjct: 292 FNLSIHAHGECVRFTRSFNIPMLVVGGGGYTLRNVARAWCYETSICVNEQIPSELPRETL 351
Query: 103 YKDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTR 162
Y +FF PDY LHP K +N N+ + LE + + L+ + +PSVQMQ +
Sbjct: 352 YYEFFAPDYTLHPRLTTKIENKNTPKALEDLRIRALEQLRYLGGAPSVQMQQI-----PP 406
Query: 163 DIGAVLDEMDPDIKNPQLEEDKRVD 187
D+ L+E D + + L DK VD
Sbjct: 407 DLTGHLEEEDERLNDEYL--DKAVD 429
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 261 (96.9 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 56/155 (36%), Positives = 86/155 (55%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F KGH +CV+ V+ YT+RNVARCWTYET++ ++ EI N++P + Y
Sbjct: 275 FVYCVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDY 334
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PD+ LH N N+ +Y+E I + +++NL+M+ +P VQMQ + D D
Sbjct: 335 FEYFGPDFKLHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHED 393
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
G D DPD + DKR+ EF D +++
Sbjct: 394 SGDE-DGEDPDKRISIRASDKRIACDEEFSDSEDE 427
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 247 (92.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 50/118 (42%), Positives = 72/118 (61%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ KGH CV FV+ YT+RNVAR WTYET LL EE+ ++P + Y
Sbjct: 271 FNLSMKGHSMCVDFVKSFNLPMICVGGGGYTVRNVARVWTYETGLLAGEELDENLPYNDY 330
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFT 161
++ PDY L+ + +N N++QYL+ IT + +NL+ ++F+PSVQM GD FT
Sbjct: 331 LQYYGPDYKLNV-LSNNMENHNTRQYLDSITSEIIENLRNLSFAPSVQMHKTPGD-FT 386
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 247 (92.0 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 55/156 (35%), Positives = 88/156 (56%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSL- 102
F+L K HGECVKFV+ YT RNV+R WTYET +L + + DIP+ +
Sbjct: 293 FNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIPEDIP 352
Query: 103 YKDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTR 162
++D F PDY+L+P ++N NSK+ LE I +N++ + +PSV+M + T+
Sbjct: 353 FRDSFGPDYSLYPMLDDLYENKNSKKLLEDIRIRCLENIRYLQGAPSVRMDAEC--IPTQ 410
Query: 163 DIGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
DI A+ +E D I+ ++ E+ D +N + + +
Sbjct: 411 DISALTEEEDKIIQ--EMNEETEADSSNRLEEMEKE 444
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 248 (92.4 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 57/156 (36%), Positives = 82/156 (52%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ KGH ECVKF+R YT+RNVARCW YET + + E+ + +P+ Y
Sbjct: 282 FNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEY 341
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PDY LH +N NS+Q LE I + NL + +PSV Q+ D T
Sbjct: 342 YEYFGPDYTLHVA-PSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTET-- 398
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQ 199
P++ Q + DKR DP ++ D D+D+
Sbjct: 399 ---------PEVDEDQEDGDKRWDPDSDM-DVDDDR 424
Score = 107 (42.7 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 3 TLSHDRLGQFSLTTKGHGECVKFVRDLNVP 32
+LS DRLG F+L+ KGH ECVKF+R NVP
Sbjct: 273 SLSGDRLGCFNLSIKGHAECVKFMRSFNVP 302
Score = 78 (32.5 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 24/82 (29%), Positives = 39/82 (47%)
Query: 122 DNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRDIGAVLDEMDPDIKNPQLE 181
+N NS+Q LE I + NL + +PSV Q E PD + P+++
Sbjct: 359 ENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQ----------------ERPPDTETPEVD 402
Query: 182 EDKRVDPANEFYDGDNDQDAPD 203
ED+ + ++ +D D+D D D
Sbjct: 403 EDQ--EDGDKRWDPDSDMDVDD 422
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 241 (89.9 bits), Expect = 9.8e-20, P = 9.8e-20
Identities = 58/160 (36%), Positives = 85/160 (53%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GH CV FVR YT+RNVAR W +ET + E + ++P + Y
Sbjct: 282 FNLSMRGHANCVNFVRSLGVPVMVLGGGGYTIRNVARTWAFETGVCNGEILPKELPYNGY 341
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
+++ P Y L + NANSK+YL+ I V NL +PSVQM ++ D+ D
Sbjct: 342 YEYYAPTYELDVRSANM-TNANSKEYLDKILTQVISNLDNTKHTPSVQMNEVPLDM--ED 398
Query: 164 IGAVLDEMDP--DIKN-PQLEEDKRVDPANEFYDGDNDQD 200
+G V ++M D K Q +DK V EFYD D+++D
Sbjct: 399 LGDVDEDMPDAIDTKGGSQFAKDKLVQADGEFYD-DDEKD 437
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 241 (89.9 bits), Expect = 9.8e-20, P = 9.8e-20
Identities = 58/160 (36%), Positives = 85/160 (53%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GH CV FVR YT+RNVAR W +ET + E + ++P + Y
Sbjct: 282 FNLSMRGHANCVNFVRSLGVPVMVLGGGGYTIRNVARTWAFETGVCNGEILPKELPYNGY 341
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
+++ P Y L + NANSK+YL+ I V NL +PSVQM ++ D+ D
Sbjct: 342 YEYYAPTYELDVRSANM-TNANSKEYLDKILTQVISNLDNTKHTPSVQMNEVPLDM--ED 398
Query: 164 IGAVLDEMDP--DIKN-PQLEEDKRVDPANEFYDGDNDQD 200
+G V ++M D K Q +DK V EFYD D+++D
Sbjct: 399 LGDVDEDMPDAIDTKGGSQFAKDKLVQADGEFYD-DDEKD 437
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 239 (89.2 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 52/160 (32%), Positives = 88/160 (55%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ GH C+ +V+ YT+RNVAR W YE+ LL N ++ +++P + Y
Sbjct: 283 FNLSMNGHANCINYVKSFNIPMMVVGGGGYTMRNVARTWAYESGLLNNVKLPDELPYNEY 342
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
+++ PDY L + N NS ++L+ I + NL+ +PSVQM ++ D D
Sbjct: 343 YEYYGPDYKLDVRSSNMF-NQNSPEFLDKILTNIIANLENTKHAPSVQMNEVPND--PED 399
Query: 164 IGAVLDE--MDPDIKN-PQLEEDKRVDPANEFYDGDNDQD 200
+G V ++ M D K ++ D ++ P NEFY+ D+++D
Sbjct: 400 LGDVEEDTAMAIDTKGGSEMSRDAQIQPDNEFYE-DDEKD 438
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 239 (89.2 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 52/160 (32%), Positives = 88/160 (55%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ GH C+ +V+ YT+RNVAR W YE+ LL N ++ +++P + Y
Sbjct: 283 FNLSMNGHANCINYVKSFNIPMMVVGGGGYTMRNVARTWAYESGLLNNVKLPDELPYNEY 342
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
+++ PDY L + N NS ++L+ I + NL+ +PSVQM ++ D D
Sbjct: 343 YEYYGPDYKLDVRSSNMF-NQNSPEFLDKILTNIIANLENTKHAPSVQMNEVPND--PED 399
Query: 164 IGAVLDE--MDPDIKN-PQLEEDKRVDPANEFYDGDNDQD 200
+G V ++ M D K ++ D ++ P NEFY+ D+++D
Sbjct: 400 LGDVEEDTAMAIDTKGGSEMSRDAQIQPDNEFYE-DDEKD 438
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 236 (88.1 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 53/157 (33%), Positives = 82/157 (52%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ KGH +C++F+R YT+RNVARCW YET++ V E N +P + Y
Sbjct: 286 FNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY 345
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
++F PDY LH + +N N+ + +E I T+ + L + +PSVQ Q T
Sbjct: 346 FEYFGPDYTLHVD-PSPMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQH------TPP 398
Query: 164 IGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQD 200
+ VLDE + D++ R+ Y+ D+D D
Sbjct: 399 VNRVLDEPEDDMET---RPKPRIWSGTATYESDSDDD 432
>TAIR|locus:2157111 [details] [associations]
symbol:HDA7 "histone deacetylase7" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
Genevestigator:Q9FH09 Uniprot:Q9FH09
Length = 409
Score = 227 (85.0 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 46/113 (40%), Positives = 70/113 (61%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ KGHG+C+++VR YTL NVARCW YET++ V E++ ND+P + Y
Sbjct: 277 FNLSIKGHGDCLQYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDY 336
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELIT--KTVYDNLKMVAFSPSVQMQD 154
+F+PDY LH ++ N N++ L++IT +T+ L +V +PSV QD
Sbjct: 337 MKYFRPDYKLHILPTNRQ-NLNTR--LDIITMRETLLAQLSLVMHAPSVPFQD 386
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 217 (81.4 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 50/153 (32%), Positives = 78/153 (50%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F+L+ +GH CV +V+ YT+RNVAR W +ET LL N + D+P + Y
Sbjct: 284 FNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMRNVARTWCFETGLLNNVVLDKDLPYNEY 343
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFTRD 163
+++ PDY L + N N+ +YL+ + ++ NL+ ++PSVQ+ D D
Sbjct: 344 YEYYGPDYKLSVRPSNMF-NVNTPEYLDKVMTNIFANLENTKYAPSVQLNHTPRDA--ED 400
Query: 164 IGAVLDEMDP--DIKN-PQLEEDKRVDPANEFY 193
+G V ++ D K Q D V+ NEFY
Sbjct: 401 LGDVEEDSAEAKDTKGGSQYARDLHVEHDNEFY 433
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 212 (79.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 52/144 (36%), Positives = 78/144 (54%)
Query: 43 QFSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPD-S 101
QF+L+ H VK+V+ YTLRNVARCW ET +++ + ++IP S
Sbjct: 294 QFALSFNAHARAVKYVKSLGKPLMVLGGGGYTLRNVARCWALETGVILGLRMDDEIPGTS 353
Query: 102 LYKDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGDVFT 161
LY +F P L P V K ++ANS YL I K L+M+ +PSVQMQ+++G
Sbjct: 354 LYSHYFTPRL-LRPNLVPKMNDANSAAYLASIEKETLACLRMIRGAPSVQMQNIVG---I 409
Query: 162 RDIGAVLDEMDPDIKNPQLEEDKR 185
R LDE++ +N +L++ +
Sbjct: 410 R-----LDEIEQIEENERLQKSSK 428
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 200 (75.5 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 51/172 (29%), Positives = 89/172 (51%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVN--EEISNDIPDS 101
F+L HG CV + + YT RNV+R W +ETS+L++ ++I+ IP +
Sbjct: 314 FNLNVAAHGACVAYTKTFGLPMLVVGGGGYTPRNVSRAWAHETSILIDAQDKINPVIPSN 373
Query: 102 L-YKDFFQPDYNLHPEF--VHKHDNANSKQYLELITKTVYDNLKMVAFSPSVQMQDMIGD 158
+ +++ F PD++L P + K +N NS+ YL I +T+ + L+ + +PSVQM
Sbjct: 374 VAFRNHFGPDFSLFPPLSEMRKLENKNSRAYLATIVQTITEQLRYLQAAPSVQMS----- 428
Query: 159 VFTRDIGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDNDQDAPDTEMSWGL 210
V D+ + +E + +I+ EE +++ E +G + D E GL
Sbjct: 429 VIPPDLLGLREETEKEIE----EEIAKLEEKREEAEGGKNSRRRDAEKGAGL 476
>RGD|619976 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005657 "replication fork" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0006344 "maintenance of chromatin silencing" evidence=ISO]
[GO:0006476 "protein deacetylation" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0009913
"epidermal cell differentiation" evidence=ISO] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=ISO] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISO;IMP] [GO:0016358 "dendrite development"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=ISO;IMP]
[GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581 "NuRD complex"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031072 "heat shock
protein binding" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0034605 "cellular response to heat" evidence=IEP]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO] [GO:0042220 "response
to cocaine" evidence=IEP] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP] [GO:0042733 "embryonic digit morphogenesis"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051896 "regulation of protein kinase B signaling
cascade" evidence=ISO] [GO:0055013 "cardiac muscle cell
development" evidence=ISO] [GO:0060044 "negative regulation of
cardiac muscle cell proliferation" evidence=ISO] [GO:0060297
"regulation of sarcomere organization" evidence=ISO] [GO:0060789
"hair follicle placode formation" evidence=ISO] [GO:0061029 "eyelid
development in camera-type eye" evidence=ISO] [GO:0061198
"fungiform papilla formation" evidence=ISO] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=ISO] [GO:0090311 "regulation of protein deacetylation"
evidence=ISO] RGD:619976 GO:GO:0045892 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0034605 GO:GO:0042493 GO:GO:0042220
GO:GO:0000785 GO:GO:0031072 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 GO:GO:0010977 EMBL:AF321130 IPI:IPI00914263
UniGene:Rn.1797 ProteinModelPortal:Q99PA1 DIP:DIP-46498N
STRING:Q99PA1 PhosphoSite:Q99PA1 InParanoid:Q99PA1
Genevestigator:Q99PA1 Uniprot:Q99PA1
Length = 174
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 39/115 (33%), Positives = 65/115 (56%)
Query: 84 YETSLLVNEEISNDIPDSLYKDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKM 143
YET++ ++ EI N++P + Y ++F PD+ LH N N+ +Y+E I + +++NL+M
Sbjct: 1 YETAVALDCEIPNELPYNDYFEYFGPDFKLHIS-PSNMTNQNTPEYMEKIKQRLFENLRM 59
Query: 144 VAFSPSVQMQDMIGDVFTRDIGAVLDEMDPDIKNPQLEEDKRVDPANEFYDGDND 198
+ +P VQMQ + D D G D DPD + DKR+ EF D +++
Sbjct: 60 LPHAPGVQMQAIPEDAVHEDSGDE-DGEDPDKRISIRASDKRIACDEEFSDSEDE 113
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 147 (56.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F++T +G G+C+K+V Y L N ARCWTY T +++ +S++IPD +
Sbjct: 277 FNMTPEGVGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGRTLSSEIPDHEF 336
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMV 144
+ PDY L + D N Q ++ I + NLK V
Sbjct: 337 FTEYGPDYVLEITPSCRPDR-NDPQRIQEILNLIKGNLKHV 376
>UNIPROTKB|B4DQE7 [details] [associations]
symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
deacetylase activity" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
Ensembl:ENST00000429103 Uniprot:B4DQE7
Length = 182
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F++T G G+C+K++ Y L N ARCWTY T +++ + +S++IPD +
Sbjct: 82 FNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEF 141
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMV 144
+ PDY L + D N ++ I + NLK V
Sbjct: 142 FTAYGPDYVLEITPSCRPDR-NEPHRIQQILNYIKGNLKHV 181
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 150 (57.9 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F++T+ G +C+ ++ Y L N ARCWTY T ++ + +S++IPD +
Sbjct: 1276 FNMTSVGVAKCLTYILGWELPTLLLGGGGYNLANTARCWTYLTGTVLGQTLSSEIPDHEF 1335
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMV 144
+ PDY+L + D N Q+LE + T+ NLK V
Sbjct: 1336 FTEYGPDYSLEISPSCRPDR-NESQHLERVISTIKGNLKNV 1375
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 141 (54.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F++T G G+C+K+V Y L N ARCWTY T +++ + +S++IPD +
Sbjct: 277 FNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEF 336
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMV 144
+ PDY L + D N ++ I + NLK V
Sbjct: 337 FTAYGPDYVLEITPSCRPDR-NEPHRIQQILNYIKGNLKHV 376
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 141 (54.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F++T G G+C+K+V Y L N ARCWTY T +++ + +S++IPD +
Sbjct: 277 FNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEF 336
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMV 144
+ PDY L + D N ++ I + NLK V
Sbjct: 337 FTAYGPDYVLEITPSCRPDR-NEPHRIQQILNYIKGNLKHV 376
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 140 (54.3 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F++T G G+C+K++ Y L N ARCWTY T +++ + +S++IPD +
Sbjct: 277 FNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEF 336
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMV 144
+ PDY L + D N ++ I + NLK V
Sbjct: 337 FTAYGPDYVLEITPSCRPDR-NEPHRIQQILNYIKGNLKHV 376
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F++T G G+C+K++ Y L N ARCWTY T +++ + +S++IPD +
Sbjct: 277 FNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEF 336
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMV 144
+ PDY L + D N ++ I + NLK V
Sbjct: 337 FTAYGPDYVLEITPSCRPDR-NEPHRVQQILNYIKGNLKHV 376
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F++T G G+C+K++ Y L N ARCWTY T +++ + +S++IPD +
Sbjct: 277 FNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEF 336
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMV 144
+ PDY L + D N ++ I + NLK V
Sbjct: 337 FTAYGPDYVLEITPSCRPDR-NEPHRVQQILNYIKGNLKHV 376
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 139 (54.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDSLY 103
F++T G G+C+K++ Y L N ARCWTY T +++ + +S++IPD +
Sbjct: 315 FNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEF 374
Query: 104 KDFFQPDYNLHPEFVHKHDNANSKQYLELITKTVYDNLKMV 144
+ PDY L + D N ++ I + NLK V
Sbjct: 375 FTAYGPDYVLEITPSCRPDR-NEPHRVQQILNYIKGNLKHV 414
>UNIPROTKB|E7EWI8 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854 ChiTaRS:HDAC3
IPI:IPI00930193 ProteinModelPortal:E7EWI8 SMR:E7EWI8
Ensembl:ENST00000523353 ArrayExpress:E7EWI8 Bgee:E7EWI8
Uniprot:E7EWI8
Length = 128
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISND 97
F+L+ +GHGECV++V+ YT+RNVA TYETSLLV E IS +
Sbjct: 78 FNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA---TYETSLLVEEAISEE 128
Score = 97 (39.2 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 3 TLSHDRLGQFSLTTKGHGECVKFVRDLNVP 32
+L DRLG F+L+ +GHGECV++V+ N+P
Sbjct: 69 SLGCDRLGCFNLSIRGHGECVEYVKSFNIP 98
>UNIPROTKB|F1RPM1 [details] [associations]
symbol:LOC100625846 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
Length = 142
Score = 109 (43.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 44 FSLTTKGHGECVKFVRD--XXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPD 100
F++T G G+C+K++ Y L N ARCWTY T +++ + +S++IPD
Sbjct: 82 FNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTARCWTYLTGVILGKTLSSEIPD 140
>UNIPROTKB|A6NGJ7 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
Bgee:A6NGJ7 Uniprot:A6NGJ7
Length = 248
Score = 118 (46.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 44 FSLTTKGHGECVKFVRDXXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPD 100
F++T G G+C+K++ Y L N ARCWTY T +++ + +S++IPD
Sbjct: 186 FNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 242
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 44 FSLTTKGHGECVKFVRD--XXXXXXXXXXXXYTLRNVARCWTYETSLLVNEEISNDIPDS 101
F++T G G+C+K++ Y L N ARCWTY T +++ + +S++IPD
Sbjct: 277 FNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTARCWTYLTGVILGKTLSSEIPDH 336
Query: 102 LYKDFFQP 109
K P
Sbjct: 337 EVKSCLSP 344
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 213 191 0.00094 110 3 11 22 0.48 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 76
No. of states in DFA: 598 (64 KB)
Total size of DFA: 175 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.32u 0.07s 19.39t Elapsed: 00:00:11
Total cpu time: 19.33u 0.07s 19.40t Elapsed: 00:00:12
Start: Thu Aug 15 11:16:06 2013 End: Thu Aug 15 11:16:18 2013