BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10342
(285 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P56520|HDAC3_CHICK Histone deacetylase 3 OS=Gallus gallus GN=HDAC3 PE=2 SV=1
Length = 428
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/244 (69%), Positives = 204/244 (83%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP+ + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY++NV RD S+K +F+ ++
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 244 LLPF 247
++ +
Sbjct: 243 VVDY 246
>sp|Q4SFA0|HDAC3_TETNG Histone deacetylase 3 OS=Tetraodon nigroviridis GN=hdac3 PE=3 SV=1
Length = 428
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/247 (69%), Positives = 206/247 (83%), Gaps = 1/247 (0%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
M+N+T SYFY+PDVGNFHYGA HPMKPHRLS+ +SL+L YGL+KKM +++PYKAS HDMC
Sbjct: 1 MTNRT-SYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMC 59
Query: 61 RFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLN 120
RFHS +YIDFL VSP+ + TK L F G+DCP+F GL++FCS YTGASL+GA QLN
Sbjct: 60 RFHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLN 119
Query: 121 NNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQD 180
+ CDIAINW+GGLHHAKK EASGFCYVNDIVI+ILELLKYHPRVLYIDID+HHGDGVQ+
Sbjct: 120 HKICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQE 179
Query: 181 AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRER 240
AFYLTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S++++F+
Sbjct: 180 AFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPV 239
Query: 241 VHSLLPF 247
+ ++ F
Sbjct: 240 IKQVVDF 246
>sp|Q5RB76|HDAC3_PONAB Histone deacetylase 3 OS=Pongo abelii GN=HDAC3 PE=2 SV=1
Length = 428
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/244 (70%), Positives = 202/244 (82%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+ ++
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 244 LLPF 247
++ F
Sbjct: 243 VVDF 246
>sp|O15379|HDAC3_HUMAN Histone deacetylase 3 OS=Homo sapiens GN=HDAC3 PE=1 SV=2
Length = 428
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/244 (70%), Positives = 202/244 (82%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+ ++
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 244 LLPF 247
++ F
Sbjct: 243 VVDF 246
>sp|Q6P6W3|HDAC3_RAT Histone deacetylase 3 OS=Rattus norvegicus GN=Hdac3 PE=1 SV=1
Length = 428
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/244 (70%), Positives = 201/244 (82%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+ +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQ 242
Query: 244 LLPF 247
++ F
Sbjct: 243 VVDF 246
>sp|O88895|HDAC3_MOUSE Histone deacetylase 3 OS=Mus musculus GN=Hdac3 PE=1 SV=1
Length = 424
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/244 (70%), Positives = 201/244 (82%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+ +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQ 242
Query: 244 LLPF 247
++ F
Sbjct: 243 VVDF 246
>sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicalis GN=hdac3 PE=2 SV=1
Length = 428
Score = 363 bits (931), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 169/244 (69%), Positives = 201/244 (82%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYG HPMKPHRLS+ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP+ + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLY+DID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYVDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S++ +F+ +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQ 242
Query: 244 LLPF 247
++ F
Sbjct: 243 VIDF 246
>sp|Q803C3|HDAC3_DANRE Histone deacetylase 3 OS=Danio rerio GN=hdac3 PE=2 SV=1
Length = 428
Score = 363 bits (931), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 171/247 (69%), Positives = 205/247 (82%), Gaps = 1/247 (0%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
M+N+T +YFY+PDVGNFHYGA HPMKPHRLS+ +SL+L YGL+KKM +++PYKAS HDMC
Sbjct: 1 MTNRT-AYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMC 59
Query: 61 RFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLN 120
RFHS +YIDFL VSP+ + TK L F G DCP+F GL++FCS YTGASL+GA QLN
Sbjct: 60 RFHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGGDCPVFPGLFEFCSRYTGASLQGATQLN 119
Query: 121 NNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQD 180
+ CDIAINW+GGLHHAKK EASGFCYVNDIVI+ILELLKYHPRVLYIDID+HHGDGVQ+
Sbjct: 120 HKICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQE 179
Query: 181 AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRER 240
AFYLTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S++++F+
Sbjct: 180 AFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPV 239
Query: 241 VHSLLPF 247
+ ++ F
Sbjct: 240 IKQVVDF 246
>sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN=hdac3 PE=2 SV=2
Length = 428
Score = 360 bits (923), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 169/244 (69%), Positives = 200/244 (81%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYG HPMKPHRLS+ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP+ + TK L F G+DCP+F GL++FCS YTGASL+GA LNN
Sbjct: 63 SEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATLLNNKN 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S++ +F+ +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQ 242
Query: 244 LLPF 247
++ F
Sbjct: 243 VIDF 246
>sp|P56518|HDAC1_STRPU Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1
PE=2 SV=1
Length = 576
Score = 316 bits (810), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 143/237 (60%), Positives = 188/237 (79%), Gaps = 1/237 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ K V Y+Y+ DVGN++YG HPMKPHR+ + ++LIL YGL++KM+IYRP+KA +M +
Sbjct: 6 TKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMTK 65
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +Y+ FL T+ PD + E+TK + +F GEDCP+F GLY+FC + +G S+ GA++LN
Sbjct: 66 YHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNK 125
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIAINW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 126 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 185
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKY G +FP +GD+ +IGA G+YY+VN RD S+ ++F+
Sbjct: 186 FYTTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFK 241
>sp|Q55BW2|HDA12_DICDI Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1
Length = 422
Score = 313 bits (802), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 149/246 (60%), Positives = 190/246 (77%), Gaps = 1/246 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
S V YF++ DVGN+ YG HPMKPHRL + N+L+L YGLHKKM +Y+ A DM +
Sbjct: 11 SKTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDMLK 70
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
FHS +Y+DFL V+P+ I+E K + +F GEDCP+F GLYD+CS+Y+G S+EGA++LN+
Sbjct: 71 FHSEDYVDFLERVTPENINEW-KDVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLNH 129
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIAINWSGGLHHA+K EASGFCYVNDIV+AILELLK+H RVLYIDIDVHHGDGVQ+A
Sbjct: 130 RMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQEA 189
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
FYLTDRVMTVSFHK+GG FFP +GD+ EIGA+ G+ YSVNV D ++ +F+ +
Sbjct: 190 FYLTDRVMTVSFHKFGGDFFPGTGDIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVI 249
Query: 242 HSLLPF 247
++ +
Sbjct: 250 QGVMDY 255
>sp|Q92769|HDAC2_HUMAN Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2
Length = 488
Score = 311 bits (798), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 139/242 (57%), Positives = 191/242 (78%), Gaps = 1/242 (0%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++H
Sbjct: 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 69
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EYI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 70 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ 129
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
D+A+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY
Sbjct: 130 TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 189
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMTVSFHKY G +FP +GD+ +IGA G+YY+VN RD S+ ++F+ +
Sbjct: 190 TTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISK 248
Query: 244 LL 245
++
Sbjct: 249 VM 250
>sp|P70288|HDAC2_MOUSE Histone deacetylase 2 OS=Mus musculus GN=Hdac2 PE=1 SV=1
Length = 488
Score = 311 bits (797), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 139/242 (57%), Positives = 191/242 (78%), Gaps = 1/242 (0%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++H
Sbjct: 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 69
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EYI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 70 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ 129
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
D+A+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY
Sbjct: 130 TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 189
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMTVSFHKY G +FP +GD+ +IGA G+YY+VN RD S+ ++F+ +
Sbjct: 190 TTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISK 248
Query: 244 LL 245
++
Sbjct: 249 VM 250
>sp|Q91695|HDA1A_XENLA Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-a PE=1
SV=1
Length = 480
Score = 308 bits (788), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 138/237 (58%), Positives = 187/237 (78%), Gaps = 1/237 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ K V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+I+RP+KAS DM +
Sbjct: 7 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIFRPHKASAEDMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + G S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DI++NWSGGLHHAKKSEASGFCYVNDIV+AILELLKYH RV+YIDID+HHGDGV++A
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKY G +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNYALRDGIDDESYEAIFK 242
>sp|O09106|HDAC1_MOUSE Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1
Length = 482
Score = 307 bits (787), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 138/237 (58%), Positives = 188/237 (79%), Gaps = 1/237 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKY G +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>sp|Q4QQW4|HDAC1_RAT Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1
Length = 482
Score = 307 bits (787), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 138/237 (58%), Positives = 188/237 (79%), Gaps = 1/237 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKY G +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>sp|Q5RAG0|HDAC1_PONAB Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1
Length = 482
Score = 307 bits (787), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 138/237 (58%), Positives = 188/237 (79%), Gaps = 1/237 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKY G +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>sp|Q13547|HDAC1_HUMAN Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1
Length = 482
Score = 307 bits (787), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 138/237 (58%), Positives = 188/237 (79%), Gaps = 1/237 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKY G +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>sp|Q32PJ8|HDAC1_BOVIN Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1
Length = 482
Score = 307 bits (786), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 138/237 (58%), Positives = 188/237 (79%), Gaps = 1/237 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKY G +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>sp|O42227|HDA1B_XENLA Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-b PE=1
SV=1
Length = 480
Score = 307 bits (786), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 138/237 (58%), Positives = 188/237 (79%), Gaps = 1/237 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ K V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KAS +M +
Sbjct: 7 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DI++NWSGGLHHAKKSEASGFCYVNDIV+AILELLKYH RV+YIDID+HHGDGV++A
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVM+VSFHKY G +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMSVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1
SV=2
Length = 521
Score = 306 bits (785), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 138/236 (58%), Positives = 183/236 (77%), Gaps = 1/236 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
S K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 5 SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
FHS EY+ FL ++ PD + E+ K + +F GEDCP+F GLY+FC + G S+ A++LN
Sbjct: 65 FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
+I INW GGLHHAKKSEASGFCYVNDIV+ ILELLKYH RVLYIDIDVHHGDGV++A
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMF 237
FY TDRVMTVSFHKY G +FP +GD+ +IGA G+YY+VN+ RD +++ +F
Sbjct: 185 FYTTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIF 239
>sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1
Length = 480
Score = 306 bits (784), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 137/244 (56%), Positives = 190/244 (77%), Gaps = 1/244 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + G S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
FY TDRVMTVSFHKY G +FP +GD+ +IGA G+YY+VN RD S++ +F+ +
Sbjct: 187 FYTTDRVMTVSFHKY-GEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245
Query: 242 HSLL 245
++
Sbjct: 246 SKVM 249
>sp|Q55FN5|HDA11_DICDI Type-1 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaA
PE=2 SV=1
Length = 495
Score = 306 bits (783), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 140/247 (56%), Positives = 193/247 (78%), Gaps = 1/247 (0%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
MS + VSYFY+ +VGN +YG HPMKPHR+ + + L+L YG++KKMQI+RP KAS ++
Sbjct: 1 MSTRKVSYFYDNEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELT 60
Query: 61 RFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLN 120
FHS +YI+FL V+PD +H+++K L +F EDCP+F G+Y+FC + +G S+ A+++N
Sbjct: 61 NFHSDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNFCQISSGGSIGCAVKVN 120
Query: 121 NNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQD 180
+ D+AINW+GGLHHAKKSEASGFCY NDIV++ILELLK+H RVLYIDID+HHGDGV++
Sbjct: 121 SKESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEE 180
Query: 181 AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRER 240
AFY TDRVMTVSFHKY G +FP +GD+ +IGA+ G+YYS+N +D S++ +FR
Sbjct: 181 AFYTTDRVMTVSFHKY-GDYFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPI 239
Query: 241 VHSLLPF 247
+ S++ F
Sbjct: 240 IRSVMDF 246
>sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPD3 PE=1 SV=1
Length = 433
Score = 301 bits (772), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 137/244 (56%), Positives = 187/244 (76%), Gaps = 1/244 (0%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ V+YFY+ DVGN+ YGA HPMKPHR+ + +SLI+ YGL+KKM+IYR A+ +MC+FH
Sbjct: 19 RRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQFH 78
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
+ EYIDFL V+PD + + +F G+DCP+F GLY++CS+ G S+EGA +LN
Sbjct: 79 TDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRGK 138
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CD+A+N++GGLHHAKKSEASGFCY+NDIV+ I+ELL+YHPRVLYIDIDVHHGDGV++AFY
Sbjct: 139 CDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAFY 198
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMT SFHKY G FFP +G++ +IG G+ Y+VNV RD ++++ +F +
Sbjct: 199 TTDRVMTCSFHKY-GEFFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKK 257
Query: 244 LLPF 247
++ +
Sbjct: 258 IMEW 261
>sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1
Length = 426
Score = 300 bits (769), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 134/244 (54%), Positives = 184/244 (75%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
S +SYFY+ DVG+ ++G HPMKPHRL + + LIL YGLH KM++YRP+KA +M +
Sbjct: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQ 62
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
FHS +Y++FL ++P+ + + ++ GEDCP+F L++FC +Y G +++ A +LNN
Sbjct: 63 FHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNN 122
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
CDIAINW+GGLHHAKK +ASGFCY+ND+V+ ILELLK+HPRVLYIDIDVHHGDGV++A
Sbjct: 123 KLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEA 182
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
FY TDRVMTVSFHK+G FFP +GD+ EIG G++Y++NV +D SS R+FR +
Sbjct: 183 FYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTII 242
Query: 242 HSLL 245
++
Sbjct: 243 SKVV 246
>sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis elegans GN=hda-1 PE=1 SV=1
Length = 461
Score = 296 bits (759), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 136/235 (57%), Positives = 178/235 (75%), Gaps = 1/235 (0%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ V+Y+Y+ ++GN++YG H MKPHR+ + + L+L YGL++ ++I+RP+ AS+ DM RFH
Sbjct: 13 RRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRFH 72
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EY+ FL + +PD + K + +F GEDCP+F GLY+FC + +G SL A +LN
Sbjct: 73 SDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQK 132
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
DIAINW GGLHHAKKSEASGFCY NDIV+ ILELLKYH RVLY+DIDVHHGDGV++AFY
Sbjct: 133 VDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAFY 192
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
TDRVMTVSFHKY G FFP +GD+ +IGA G+ YSVNV RD S++ +F+
Sbjct: 193 TTDRVMTVSFHKY-GDFFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFK 246
>sp|P56519|HDAC2_CHICK Histone deacetylase 2 OS=Gallus gallus GN=HDAC2 PE=2 SV=1
Length = 488
Score = 296 bits (757), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 134/242 (55%), Positives = 185/242 (76%), Gaps = 1/242 (0%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++H
Sbjct: 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 69
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EYI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 70 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ 129
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
D+A+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY
Sbjct: 130 TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 189
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMTVS FP +GD+ +IGA G+YY+VN RD S+ ++F+ +
Sbjct: 190 TTDRVMTVSEVSMVNN-FPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISK 248
Query: 244 LL 245
++
Sbjct: 249 VM 250
>sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1
Length = 513
Score = 293 bits (749), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 136/237 (57%), Positives = 179/237 (75%), Gaps = 2/237 (0%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ V YFY+PDVGN++YG HPMKPHR+ + +SL+ YGL +MQ+YRP A ++CR
Sbjct: 21 QKRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARERELCR 80
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
FH+ EYI+FL +V+P+ + + L +F GE+CP+ GLY FC Y GAS+ GA++ N+
Sbjct: 81 FHAEEYINFLRSVTPETQQDQIRLLKRFNVGEECPVLDGLYSFCQTYAGASVGGAVKFNH 140
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIAINWSGGLHHAKK EASGFCYVNDIV+AILELLK+H RVLY+DID+HHGDGV++A
Sbjct: 141 GH-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEA 199
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHK+ G +FP +GD+ +IG G+YYS+NV D S++ +F+
Sbjct: 200 FYTTDRVMTVSFHKF-GDYFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFK 255
>sp|O22446|HDA19_ARATH Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2
Length = 501
Score = 286 bits (733), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 130/235 (55%), Positives = 177/235 (75%), Gaps = 1/235 (0%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ V YFY+P+VGN++YG HPMKPHR+ + ++L+ YGL + MQ+ +P+ A D+CRFH
Sbjct: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRFH 76
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
+ +Y+ FL +++P+ + + L +F GEDCP+F GLY FC Y G S+ G+++LN+
Sbjct: 77 ADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHGL 136
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIV+AILELLK H RVLY+DID+HHGDGV++AFY
Sbjct: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
TDRVMTVSFHK+ G +FP +G + +IG G+YYS+NV D S+ +F+
Sbjct: 197 ATDRVMTVSFHKF-GDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFK 250
>sp|Q9FML2|HDA6_ARATH Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1 SV=1
Length = 471
Score = 284 bits (727), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 136/244 (55%), Positives = 179/244 (73%), Gaps = 3/244 (1%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ VSYFY P +G+++YG HPMKPHR+ + +SLI+ Y LH++++I RP A D+ RFH
Sbjct: 19 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIGRFH 78
Query: 64 SAEYIDFLHTVSPDKIHEHT--KFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
S EY+DFL +VSP+ + + + + L +F GEDCP+F GL+DFC G S+ A++LN
Sbjct: 79 SPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLNR 138
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIAINW GGLHHAKKSEASGFCYVNDIV+ ILELLK RVLYIDIDVHHGDGV++A
Sbjct: 139 QDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEEA 198
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
FY TDRVMTVSFHK+ G FFP +G + ++GAE G+YY++NV D S + +FR +
Sbjct: 199 FYTTDRVMTVSFHKF-GDFFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLI 257
Query: 242 HSLL 245
++
Sbjct: 258 QKVM 261
>sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=phd1 PE=1 SV=1
Length = 434
Score = 281 bits (720), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 126/244 (51%), Positives = 169/244 (69%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
K V+Y + VGN+HYG KHPMKPHR+++ N L++GYGLH KM ++ P A++ +M
Sbjct: 24 QKKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSE 83
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
FH +Y+DFL V+PD + QF G+DCP+F G Y+F GASL+ + +L
Sbjct: 84 FHREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQ 143
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIAINWSGGLHHAK+ EASGFCYVNDIV+AIL +L++ PRVLYIDID+HHGDGVQ A
Sbjct: 144 GQTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQA 203
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
FY +DRV+TVSFHKY G FFP +G+ E G +GG+Y+++NV D + +F+ +
Sbjct: 204 FYESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSII 263
Query: 242 HSLL 245
+
Sbjct: 264 EPTI 267
>sp|O59702|CLR6_SCHPO Histone deacetylase clr6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr6 PE=1 SV=1
Length = 405
Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 188/281 (66%), Gaps = 10/281 (3%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K VSYFY+ DVGN+HYG +HPMKPHR+ ++++L++ Y L++K+ + P +A+ +DM R H
Sbjct: 6 KKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRCH 65
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
+ EYI+FL V+PD + + +F G+DCP+F GLY+FCS+ G S+ A +LN+
Sbjct: 66 TDEYIEFLWRVTPDTMEKFQPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNSGN 125
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
+IAINW+GGLHHAKK EASGFCYVNDI +A LELLKYH RVLYIDIDVHHGDGV++ FY
Sbjct: 126 AEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEFFY 185
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMT SFHK+ G +FP +G + + G G+ Y+VNV RD S++ +F+ +
Sbjct: 186 TTDRVMTCSFHKF-GEYFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVISH 244
Query: 244 LLPFVF--VVFFSSGLGKL-------FRFSSKTIFFCANFL 275
++ + V G L F S K C +F+
Sbjct: 245 IMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFV 285
>sp|P53096|HOS2_YEAST Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1
Length = 452
Score = 275 bits (704), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/241 (53%), Positives = 174/241 (72%), Gaps = 1/241 (0%)
Query: 6 VSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSA 65
VSY +N V ++HYG KHPMKP RL + + L+ YGLHK M +Y A+ ++ +FHS
Sbjct: 28 VSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHSE 87
Query: 66 EYIDFLHTVSPDKIHEHTK-FLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCC 124
+Y++FL VSP+ ++ + L F G+DCPIF LYD+ ++YTGASL+ +L NN
Sbjct: 88 DYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQS 147
Query: 125 DIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYL 184
DIAINWSGGLHHAKK+ SGFCYVNDIV++IL LL+YHPR+LYIDID+HHGDGVQ+AFY
Sbjct: 148 DIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFYT 207
Query: 185 TDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHSL 244
TDRV T+SFHKY G FFP +GD+ EIG + G+++++NV D S+ +F+ V L
Sbjct: 208 TDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPL 267
Query: 245 L 245
+
Sbjct: 268 I 268
>sp|Q09440|HDA2_CAEEL Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2
PE=3 SV=1
Length = 507
Score = 263 bits (671), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 162/223 (72%), Gaps = 2/223 (0%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
+ + V+Y+Y+ DVG+FHYG HPMKP RL V N L++ Y + K M + K D+
Sbjct: 26 VKKRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAADIS 85
Query: 61 RFHSAEYIDFLHTVSPD-KIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQL 119
FH+ +Y++FL TV+P + L QF GEDCPIF GL+D+C++Y G S+EGA +L
Sbjct: 86 VFHTEDYVNFLQTVTPKLGLTMPDDVLRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRL 145
Query: 120 NNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQ 179
N+ DI INW GGLHHAKKSEASGFCYVNDIV+ ILELLKYH RVLYIDID+HHGDGVQ
Sbjct: 146 NHKMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQ 205
Query: 180 DAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
+AF +DRVMTVSFH++ G +FP SG + + G G+Y+++NV
Sbjct: 206 EAFNNSDRVMTVSFHRF-GQYFPGSGSIMDKGVGPGKYFAINV 247
>sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1
Length = 409
Score = 217 bits (553), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/248 (45%), Positives = 157/248 (63%), Gaps = 11/248 (4%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ VSYFY P +G+++YG P KP R+ V ++LIL Y LH+ M+I P A D +FH
Sbjct: 10 RRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKFH 69
Query: 64 SAEYIDFLHTVSPDKIHEH----TKFLCQFASGEDC--PIFHGLYDFCSMYTGASLEGAI 117
S EYI+FL +V+P+ + + ++ L +F D P+FH L+D+C Y G S+ A
Sbjct: 70 SLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAAA 129
Query: 118 QLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDG 177
+LN DIAINW+GG+HH KK +ASGF YVND+V+AILELLK RVLYI+I HGD
Sbjct: 130 KLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGDE 189
Query: 178 VQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMF 237
V++AF TDRVMTVSFHK G +GD+ + G G+YYS+N +D S + +F
Sbjct: 190 VEEAFKDTDRVMTVSFHKVGD-----TGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGLF 244
Query: 238 RERVHSLL 245
+H +
Sbjct: 245 IPVIHRAM 252
>sp|B1H369|HDAC8_XENTR Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1
Length = 369
Score = 208 bits (529), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 136/200 (68%), Gaps = 1/200 (0%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P R S+++SLI YGL K+M++ +P AS +M FH+ Y+ LH VS + ++ + L
Sbjct: 27 PRRASMVHSLIEAYGLLKEMRVVKPKVASMEEMAAFHTDSYLQHLHKVSEEGDNDDPETL 86
Query: 87 CQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFC 146
++ G DCPI G+YD+ + GA+L A QL IAINW GG HHAKK EASGFC
Sbjct: 87 -EYGLGYDCPITEGIYDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFC 145
Query: 147 YVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGD 206
Y+ND V+ IL+L + RVLY+D+D+HHGDGV+DAF T +VMTVS HK+ GFFP +GD
Sbjct: 146 YLNDAVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 205
Query: 207 MYEIGAEGGRYYSVNVRNRD 226
+ +IG GRYYSVNV +D
Sbjct: 206 VSDIGLGKGRYYSVNVPLQD 225
>sp|Q7SXM0|HDAC8_DANRE Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1
Length = 378
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 144/224 (64%), Gaps = 3/224 (1%)
Query: 3 NKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRF 62
++V Y Y+P+ P+R S+++SLI YGL K M++ +P+ AS +M F
Sbjct: 14 TRSVVYVYSPEY--IQTCDSLSKVPNRASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVF 71
Query: 63 HSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNN 122
H+ Y+ LH +S D ++ + F G DCP+ G++D+ + GA+L A L +
Sbjct: 72 HTDSYLQHLHKISQDGDNDDPQS-ADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDG 130
Query: 123 CCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAF 182
CD+AINW+GG HHAKK EASG CYVND V+ IL+L + + RVLY+D+D+HHGDGV+DAF
Sbjct: 131 KCDVAINWAGGWHHAKKDEASGSCYVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAF 190
Query: 183 YLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
T +VMTVS HK+ GFFP +GD+ + G GR+Y+VNV D
Sbjct: 191 SFTSKVMTVSLHKFSPGFFPGTGDVTDTGLGKGRWYAVNVPFED 234
>sp|Q0VCB2|HDAC8_BOVIN Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 SV=1
Length = 377
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 134/200 (67%), Gaps = 1/200 (0%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P R S+++SLI Y LHK+M+I +P AS +M FH+ Y+ L VS D +H +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSI 94
Query: 87 CQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFC 146
++ G DCP G++D+ + GA++ A L + C +AINWSGG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFC 153
Query: 147 YVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGD 206
Y+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T +VMTVS HK+ GFFP +GD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 207 MYEIGAEGGRYYSVNVRNRD 226
+ ++G GRYYSVNV +D
Sbjct: 214 VSDVGLGKGRYYSVNVPIQD 233
>sp|Q9BY41|HDAC8_HUMAN Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2
Length = 377
Score = 205 bits (521), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 134/200 (67%), Gaps = 1/200 (0%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P R S+++SLI Y LHK+M+I +P AS +M FH+ Y+ L VS + +H +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSI 94
Query: 87 CQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFC 146
++ G DCP G++D+ + GA++ A L + C +AINWSGG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFC 153
Query: 147 YVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGD 206
Y+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T +VMTVS HK+ GFFP +GD
Sbjct: 154 YLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 207 MYEIGAEGGRYYSVNVRNRD 226
+ ++G GRYYSVNV +D
Sbjct: 214 VSDVGLGKGRYYSVNVPIQD 233
>sp|Q8VH37|HDAC8_MOUSE Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=1 SV=2
Length = 377
Score = 204 bits (520), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 1/200 (0%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P R S+++SLI Y LHK+M+I +P AS +M FH+ Y+ L VS + +H +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 87 CQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFC 146
++ G DCP G++D+ + G ++ A L + C +AINWSGG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC 153
Query: 147 YVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGD 206
Y+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T +VMTVS HK+ GFFP +GD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 207 MYEIGAEGGRYYSVNVRNRD 226
M ++G GRYYSVNV +D
Sbjct: 214 MSDVGLGKGRYYSVNVPIQD 233
>sp|B1WC68|HDAC8_RAT Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac8 PE=2 SV=1
Length = 377
Score = 204 bits (519), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 1/200 (0%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P R S+++SLI Y LHK+M+I +P AS +M FH+ Y+ L VS + +H +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 87 CQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFC 146
++ G DCP G++D+ + G ++ A L + C +AINWSGG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC 153
Query: 147 YVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGD 206
Y+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T +VMTVS HK+ GFFP +GD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 207 MYEIGAEGGRYYSVNVRNRD 226
M ++G GRYYSVNV +D
Sbjct: 214 MSDVGLGKGRYYSVNVPIQD 233
>sp|Q6GPA7|HDAC8_XENLA Histone deacetylase 8 OS=Xenopus laevis GN=hdac8 PE=2 SV=1
Length = 325
Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 121/180 (67%), Gaps = 1/180 (0%)
Query: 47 QIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCS 106
++ +P AS +M FH+ Y+ LH VS + ++ + L ++ G DCPI G+YD+ +
Sbjct: 3 RVVKPKVASMEEMAAFHTDAYLQHLHKVSEEGDNDDPETL-EYGLGYDCPITEGIYDYAA 61
Query: 107 MYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVL 166
GA+L A QL IA+NW GG HHAKK EASGFCY+ND V+ IL+L + RVL
Sbjct: 62 AVGGATLTAAEQLIEGKTRIAVNWPGGWHHAKKDEASGFCYLNDAVLGILKLREKFDRVL 121
Query: 167 YIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
Y+D+D+HHGDGV+DAF T +VMTVS HK+ GFFP +GD+ +IG GRYYS+NV +D
Sbjct: 122 YVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDIGLGKGRYYSINVPLQD 181
>sp|Q56195|ACUC_STAXY Acetoin utilization protein AcuC OS=Staphylococcus xylosus GN=acuC
PE=3 SV=1
Length = 385
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 120/248 (48%), Gaps = 4/248 (1%)
Query: 1 MSN--KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHD 58
MSN +T Y Y ++ + + KHP RL + L++ G K+ I P A+ +
Sbjct: 1 MSNMQQTTGYVYANELLQYRFSNKHPFNQMRLKLTTELLMELGQLKQHHIISPRIATDDE 60
Query: 59 MCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQ 118
+ H+ +YI + S + E+ GED F ++ + G +L A Q
Sbjct: 61 LSLIHAYDYIQAIRHASHGILSENEAKKYGL-DGEDTLQFRMMHKHSARIVGGALNLADQ 119
Query: 119 LNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELL-KYHPRVLYIDIDVHHGDG 177
+ + + GGLHH+ A+GFC ND+ I I L+ KY+ RVL ID D HHGDG
Sbjct: 120 IMSGTLTNGCHLGGGLHHSLPGRANGFCIYNDVAITISYLMQKYNQRVLCIDTDAHHGDG 179
Query: 178 VQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMF 237
Q +FY D+ + S H+ G FP SG E GAE G Y+VN+ + S +F
Sbjct: 180 TQWSFYTNDQALIYSIHETGKFLFPGSGHYTERGAEKGFGYTVNIPLEPYTEDQSFLDVF 239
Query: 238 RERVHSLL 245
++ + ++
Sbjct: 240 KQTIEPVV 247
>sp|P39067|ACUC_BACSU Acetoin utilization protein AcuC OS=Bacillus subtilis (strain 168)
GN=acuC PE=3 SV=1
Length = 387
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 8 YFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEY 67
+ Y+P + + +HP R+ + L+ I P AS ++ H+ +Y
Sbjct: 6 FIYSPSYQTYMFHQEHPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVHTDDY 65
Query: 68 IDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIA 127
I + K+ + ED P+F G+++ S+ G +L A + + A
Sbjct: 66 IQAVKLAGAGKLPAEEGESYGLGT-EDTPVFAGMHEAASLLVGGTLTAADWVMSGQALHA 124
Query: 128 INWSGGLHHAKKSEASGFCYVNDIVIAILELLK-YHPRVLYIDIDVHHGDGVQDAFYLTD 186
N GGLHH + ASGFC ND +AI + K Y RVLYID D HHGDGVQ FY
Sbjct: 125 ANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYSARVLYIDTDAHHGDGVQFTFYDNP 184
Query: 187 RVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
V T+S H+ G FP +G + E G+ G YS N+
Sbjct: 185 DVCTLSIHETGRYLFPGTGQIQEKGSGKGYGYSFNI 220
>sp|Q12214|HOS1_YEAST Histone deacetylase HOS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HOS1 PE=1 SV=1
Length = 470
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 88 QFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCY 147
Q+ DCPIF L +C + TGA+L L+ I INW GG HHA K ASGFCY
Sbjct: 163 QYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASGFCY 222
Query: 148 VNDIVIAILELLKYH-PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGD 206
+ND+V+ I L K ++ Y+D D+HHGDGV+ AF + ++ T+S H Y GFFP +G
Sbjct: 223 INDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVHLYEPGFFPGTGS 282
Query: 207 M 207
+
Sbjct: 283 L 283
>sp|Q6GFX3|ACUC_STAAR Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MRSA252) GN=acuC PE=3 SV=1
Length = 389
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 110/241 (45%), Gaps = 2/241 (0%)
Query: 6 VSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSA 65
+Y Y+ + + + +HP RL + L+L L QI +P A+ ++ H
Sbjct: 8 TAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKY 67
Query: 66 EYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCD 125
+Y++ + S I E E+ H ++ + G +L A + +
Sbjct: 68 DYVEAIKHASHGIISEDEAMKYGLNDEENGQFKH-MHRHSATIVGGALTLADLIMSGKAL 126
Query: 126 IAINWSGGLHHAKKSEASGFCYVNDIVIAILELLK-YHPRVLYIDIDVHHGDGVQDAFYL 184
+ GGLHHA+ ASGFC NDI I L K Y+ RVL ID D HHGDG Q +FY
Sbjct: 127 NGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYA 186
Query: 185 TDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHSL 244
+ V T S H+ G FP SG E G + G ++VNV + SS F+ V +
Sbjct: 187 DNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDSSFLECFKLTVEPV 246
Query: 245 L 245
+
Sbjct: 247 V 247
>sp|Q8NW34|ACUC_STAAW Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MW2) GN=acuC PE=3 SV=1
Length = 389
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 106/222 (47%), Gaps = 3/222 (1%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
S+KT +Y Y+ + + + +HP RL + L+L L QI +P A+ ++
Sbjct: 5 SSKT-AYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELML 63
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
H +Y++ + S I E E+ H ++ + G +L A + +
Sbjct: 64 IHKYDYVEAIKHASHGIISEDEAKKYGLNDEENSQFKH-MHRHSATIVGGALTLADLIMS 122
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLK-YHPRVLYIDIDVHHGDGVQD 180
+ GGLHHA+ ASGFC NDI I L K Y+ RVL ID D HHGDG Q
Sbjct: 123 GKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQW 182
Query: 181 AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
+FY + V T S H+ G FP SG E G + G ++VNV
Sbjct: 183 SFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNV 224
>sp|Q6G8J2|ACUC_STAAS Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MSSA476) GN=acuC PE=3 SV=1
Length = 389
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 106/222 (47%), Gaps = 3/222 (1%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
S+KT +Y Y+ + + + +HP RL + L+L L QI +P A+ ++
Sbjct: 5 SSKT-AYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELML 63
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
H +Y++ + S I E E+ H ++ + G +L A + +
Sbjct: 64 IHKYDYVEAIKHASHGIISEDEAKKYGLNDEENSQFKH-MHRHSATIVGGALTLADLIMS 122
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLK-YHPRVLYIDIDVHHGDGVQD 180
+ GGLHHA+ ASGFC NDI I L K Y+ RVL ID D HHGDG Q
Sbjct: 123 GKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQW 182
Query: 181 AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
+FY + V T S H+ G FP SG E G + G ++VNV
Sbjct: 183 SFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNV 224
>sp|Q5HF39|ACUC_STAAC Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
COL) GN=acuC PE=3 SV=1
Length = 389
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 106/222 (47%), Gaps = 3/222 (1%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
S+KT +Y Y+ + + + +HP RL + L+L L QI +P A+ ++
Sbjct: 5 SSKT-AYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELML 63
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
H +Y++ + S I E E+ H ++ + G +L A + +
Sbjct: 64 IHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKH-MHRHSATIVGGALTLADLIMS 122
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLK-YHPRVLYIDIDVHHGDGVQD 180
+ GGLHHA+ ASGFC NDI I L K Y+ RVL ID D HHGDG Q
Sbjct: 123 GKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQW 182
Query: 181 AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
+FY + V T S H+ G FP SG E G + G ++VNV
Sbjct: 183 SFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNV 224
>sp|P64376|ACUC_STAAN Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
N315) GN=acuC PE=1 SV=1
Length = 389
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 106/222 (47%), Gaps = 3/222 (1%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
S+KT +Y Y+ + + + +HP RL + L+L L QI +P A+ ++
Sbjct: 5 SSKT-AYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELML 63
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
H +Y++ + S I E E+ H ++ + G +L A + +
Sbjct: 64 IHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKH-MHRHSATIVGGALTLADLIMS 122
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLK-YHPRVLYIDIDVHHGDGVQD 180
+ GGLHHA+ ASGFC NDI I + K Y+ RVL ID D HHGDG Q
Sbjct: 123 GKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQW 182
Query: 181 AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
+FY + V T S H+ G FP SG E G + G ++VNV
Sbjct: 183 SFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNV 224
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,797,181
Number of Sequences: 539616
Number of extensions: 4774694
Number of successful extensions: 11087
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 10864
Number of HSP's gapped (non-prelim): 107
length of query: 285
length of database: 191,569,459
effective HSP length: 116
effective length of query: 169
effective length of database: 128,974,003
effective search space: 21796606507
effective search space used: 21796606507
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)