Query psy10342
Match_columns 285
No_of_seqs 134 out of 1120
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 15:31:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a69_A Histone deacetylase 3,; 100.0 4E-86 1.4E-90 619.6 30.3 280 3-283 2-291 (376)
2 3max_A HD2, histone deacetylas 100.0 3.3E-85 1.1E-89 610.6 29.4 279 3-283 2-290 (367)
3 3ew8_A HD8, histone deacetylas 100.0 2.7E-84 9.3E-89 607.1 23.6 279 1-283 11-299 (388)
4 1c3p_A Protein (HDLP (histone 100.0 6.4E-82 2.2E-86 592.7 26.6 274 5-282 3-289 (375)
5 1zz1_A Histone deacetylase-lik 100.0 5.2E-80 1.8E-84 578.7 26.4 265 5-281 2-298 (369)
6 3men_A Acetylpolyamine aminohy 100.0 2.4E-79 8.3E-84 569.1 24.1 272 6-283 22-334 (362)
7 3q9b_A Acetylpolyamine amidohy 100.0 1.4E-79 4.6E-84 567.8 21.5 271 7-282 2-315 (341)
8 2pqp_A HD7A, histone deacetyla 100.0 3.8E-76 1.3E-80 555.3 28.0 274 4-279 36-349 (421)
9 2vqm_A HD4, histone deacetylas 100.0 3.1E-75 1.1E-79 553.9 24.8 275 3-279 7-320 (413)
10 4h08_A Putative hydrolase; GDS 87.0 1.5 5.1E-05 35.6 6.8 58 219-280 48-110 (200)
11 2vpt_A Lipolytic enzyme; ester 69.6 5.4 0.00019 32.6 4.8 52 228-279 66-118 (215)
12 3hp4_A GDSL-esterase; psychrot 65.1 6.5 0.00022 30.9 4.2 50 227-278 48-102 (185)
13 4hf7_A Putative acylhydrolase; 63.9 7.7 0.00026 31.7 4.6 59 219-278 53-117 (209)
14 1ivn_A Thioesterase I; hydrola 57.8 26 0.00088 27.6 6.7 56 220-278 38-98 (190)
15 1yzf_A Lipase/acylhydrolase; s 53.3 39 0.0013 26.1 7.0 54 219-273 42-96 (195)
16 4gkb_A 3-oxoacyl-[acyl-carrier 52.8 80 0.0027 26.9 9.4 43 228-271 65-109 (258)
17 3p94_A GDSL-like lipase; serin 49.2 25 0.00087 27.7 5.3 57 219-277 49-112 (204)
18 3ea0_A ATPase, para family; al 48.3 8.9 0.0003 31.8 2.4 19 162-180 34-52 (245)
19 3ged_A Short-chain dehydrogena 48.2 1.1E+02 0.0039 25.8 9.6 43 229-271 58-102 (247)
20 1g3q_A MIND ATPase, cell divis 44.1 19 0.00064 29.6 3.8 18 160-177 29-46 (237)
21 4fn4_A Short chain dehydrogena 42.8 1.1E+02 0.0039 25.9 8.8 88 152-272 22-113 (254)
22 3q9l_A Septum site-determining 42.5 20 0.00069 29.8 3.8 19 160-178 29-47 (260)
23 3dci_A Arylesterase; SGNH_hydr 41.5 47 0.0016 27.1 5.9 46 232-277 87-138 (232)
24 3ez2_A Plasmid partition prote 41.5 18 0.0006 32.9 3.4 16 160-176 141-156 (398)
25 3rjt_A Lipolytic protein G-D-S 41.3 36 0.0012 26.8 5.0 35 220-255 59-93 (216)
26 1cp2_A CP2, nitrogenase iron p 40.8 26 0.00089 29.4 4.3 23 160-183 27-49 (269)
27 3pg5_A Uncharacterized protein 40.7 20 0.00068 32.3 3.7 22 160-182 28-49 (361)
28 1hyq_A MIND, cell division inh 40.7 22 0.00077 29.8 3.8 18 160-177 29-46 (263)
29 3iqw_A Tail-anchored protein t 37.9 1E+02 0.0035 27.4 7.9 22 161-184 43-64 (334)
30 3o38_A Short chain dehydrogena 37.9 1.7E+02 0.0057 24.2 9.0 42 229-270 84-127 (266)
31 3p9x_A Phosphoribosylglycinami 37.3 29 0.00099 29.2 3.9 26 229-255 65-90 (211)
32 3i1j_A Oxidoreductase, short c 37.2 1.3E+02 0.0045 24.4 8.2 42 229-270 77-121 (247)
33 2q0q_A ARYL esterase; SGNH hyd 36.9 64 0.0022 25.5 5.9 46 234-279 71-122 (216)
34 4e6p_A Probable sorbitol dehyd 36.6 1E+02 0.0035 25.6 7.4 42 229-270 65-108 (259)
35 3nyw_A Putative oxidoreductase 35.2 73 0.0025 26.5 6.2 41 229-270 70-112 (250)
36 3la6_A Tyrosine-protein kinase 35.0 23 0.00079 30.9 3.0 16 161-176 120-135 (286)
37 2afh_E Nitrogenase iron protei 34.9 37 0.0013 29.0 4.4 22 161-183 29-50 (289)
38 3ez9_A Para; DNA binding, wing 34.8 23 0.00079 32.2 3.1 16 160-176 144-159 (403)
39 3av3_A Phosphoribosylglycinami 34.4 34 0.0012 28.6 3.9 26 229-255 66-91 (212)
40 1wcv_1 SOJ, segregation protei 34.2 28 0.00095 29.3 3.3 17 161-178 34-50 (257)
41 2xj4_A MIPZ; replication, cell 33.7 29 0.001 29.8 3.5 20 160-179 31-50 (286)
42 3ek2_A Enoyl-(acyl-carrier-pro 33.6 1.5E+02 0.0052 24.4 8.0 44 229-272 75-125 (271)
43 3rih_A Short chain dehydrogena 33.6 2.2E+02 0.0077 24.2 10.5 42 229-270 102-145 (293)
44 3da8_A Probable 5'-phosphoribo 33.0 35 0.0012 28.7 3.7 27 228-255 72-98 (215)
45 3kjh_A CO dehydrogenase/acetyl 32.6 32 0.0011 28.2 3.4 15 161-176 27-41 (254)
46 1es9_A PAF-AH, platelet-activa 32.2 47 0.0016 27.0 4.4 49 230-278 77-127 (232)
47 3auf_A Glycinamide ribonucleot 32.2 38 0.0013 28.7 3.9 26 229-255 85-110 (229)
48 1fxw_F Alpha2, platelet-activa 32.0 45 0.0015 27.2 4.3 24 232-255 80-104 (229)
49 3ug7_A Arsenical pump-driving 31.9 54 0.0018 29.3 5.0 23 161-185 53-75 (349)
50 3pk0_A Short-chain dehydrogena 31.8 2.2E+02 0.0075 23.6 9.1 41 229-269 71-113 (262)
51 3tpc_A Short chain alcohol deh 31.3 2.2E+02 0.0075 23.4 8.7 27 229-255 64-91 (257)
52 3lf2_A Short chain oxidoreduct 30.8 2.3E+02 0.0078 23.5 8.8 42 229-270 70-113 (265)
53 4ds3_A Phosphoribosylglycinami 30.5 40 0.0014 28.2 3.6 26 229-255 70-95 (209)
54 3gvc_A Oxidoreductase, probabl 30.4 1.5E+02 0.0051 25.1 7.5 42 229-270 86-129 (277)
55 3mil_A Isoamyl acetate-hydroly 30.4 1E+02 0.0036 24.6 6.3 59 219-278 46-112 (240)
56 1jkx_A GART;, phosphoribosylgl 30.1 46 0.0016 27.8 4.0 26 229-255 63-88 (212)
57 3k9g_A PF-32 protein; ssgcid, 29.6 36 0.0012 28.6 3.3 19 161-180 54-72 (267)
58 3tqr_A Phosphoribosylglycinami 29.3 51 0.0017 27.7 4.1 26 229-255 67-92 (215)
59 3zq6_A Putative arsenical pump 29.2 39 0.0013 29.8 3.5 22 161-184 41-62 (324)
60 1meo_A Phosophoribosylglycinam 29.1 42 0.0014 28.0 3.6 26 229-255 63-88 (209)
61 3k31_A Enoyl-(acyl-carrier-pro 28.7 2E+02 0.0068 24.5 8.1 43 229-271 91-139 (296)
62 4egf_A L-xylulose reductase; s 28.2 2.3E+02 0.0078 23.5 8.2 42 229-270 81-124 (266)
63 2woj_A ATPase GET3; tail-ancho 27.9 39 0.0013 30.4 3.3 23 160-184 46-68 (354)
64 3end_A Light-independent proto 27.9 49 0.0017 28.5 3.9 19 160-179 67-85 (307)
65 3r1i_A Short-chain type dehydr 27.8 2.7E+02 0.0092 23.3 9.5 41 229-269 92-134 (276)
66 4dyv_A Short-chain dehydrogena 27.7 1.9E+02 0.0064 24.3 7.7 42 229-270 85-129 (272)
67 3fkq_A NTRC-like two-domain pr 27.3 43 0.0015 30.1 3.5 27 229-255 243-269 (373)
68 2ywr_A Phosphoribosylglycinami 26.9 52 0.0018 27.5 3.7 25 230-255 65-89 (216)
69 3bfv_A CAPA1, CAPB2, membrane 26.4 52 0.0018 28.2 3.8 16 161-176 110-125 (271)
70 3imf_A Short chain dehydrogena 26.0 2.7E+02 0.0094 22.8 8.6 42 229-270 66-109 (257)
71 3cio_A ETK, tyrosine-protein k 25.3 55 0.0019 28.5 3.7 17 161-177 132-148 (299)
72 2hsj_A Putative platelet activ 25.1 44 0.0015 26.6 2.9 56 221-279 62-122 (214)
73 2ph1_A Nucleotide-binding prot 24.7 53 0.0018 27.6 3.5 17 160-176 45-61 (262)
74 4fva_A 5'-tyrosyl-DNA phosphod 24.0 83 0.0028 25.3 4.5 34 219-252 18-51 (256)
75 4fs3_A Enoyl-[acyl-carrier-pro 23.8 3.1E+02 0.011 22.7 9.8 71 152-255 23-96 (256)
76 4f1h_A Tyrosyl-DNA phosphodies 23.8 86 0.003 24.6 4.5 22 231-252 20-41 (250)
77 3gaf_A 7-alpha-hydroxysteroid 23.6 1.4E+02 0.0049 24.7 6.0 42 229-271 72-115 (256)
78 1vjg_A Putative lipase from th 23.5 1.2E+02 0.0041 24.1 5.3 56 220-277 60-128 (218)
79 3svt_A Short-chain type dehydr 22.5 3.3E+02 0.011 22.6 8.8 41 229-269 74-117 (281)
80 3tzq_B Short-chain type dehydr 22.2 3.4E+02 0.012 22.5 8.7 42 229-270 68-113 (271)
81 4gz1_A Tyrosyl-DNA phosphodies 21.4 1E+02 0.0035 24.7 4.5 22 231-252 26-47 (256)
82 2o14_A Hypothetical protein YX 21.3 1.9E+02 0.0066 25.8 6.8 58 219-277 202-267 (375)
83 3obi_A Formyltetrahydrofolate 21.3 1.1E+02 0.0037 26.8 4.8 26 229-255 150-175 (288)
84 4g81_D Putative hexonate dehyd 20.6 2.2E+02 0.0076 24.1 6.6 43 229-271 69-113 (255)
85 4dzz_A Plasmid partitioning pr 20.4 73 0.0025 25.1 3.3 13 160-172 28-40 (206)
86 4fgs_A Probable dehydrogenase 20.2 1.5E+02 0.005 25.6 5.4 45 229-273 86-132 (273)
No 1
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=100.00 E-value=4e-86 Score=619.60 Aligned_cols=280 Identities=64% Similarity=1.103 Sum_probs=264.7
Q ss_pred CCcEEEEEcccccCCCCCCCCCCChhHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCCHHHHHHHHhcCCCchhhh
Q psy10342 3 NKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEH 82 (285)
Q Consensus 3 ~~~v~~iy~~~~~~~~~~~~Hpe~p~R~~~i~~~L~~~gl~~~~~~~~~~~as~e~L~~vHs~~Yv~~l~~~~~~~~~~~ 82 (285)
+++|+|+|||+|+.|.++++|||+|.|+++++++|++.|+++.+++++|++|+.++|++|||++||++|++.++.+..++
T Consensus 2 ~~~~~~~y~~~~~~~~~g~~HPe~p~Rl~~i~~~l~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~~~ 81 (376)
T 4a69_A 2 AKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGF 81 (376)
T ss_dssp CCCEEEECCTTTTCCCCCTTCSCCTHHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHCCTTTGGGG
T ss_pred CCeEEEEEChHHhCcCCCCCCCcCHHHHHHHHHHHHhcCCCCCceEeCCCCCCHHHHHHhCCHHHHHHHHHhCcccchhh
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999887655444
Q ss_pred hhhhcccccCCCCCCChhHHHHHHHHhhHHHHHHHHHhcCccCeEEeCCCCCCCCCCCCCCCccccchHHHHHHHHHhcC
Q psy10342 83 TKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYH 162 (285)
Q Consensus 83 ~~~~~~~~~~~d~~~~~~~~~~a~~a~g~~l~aa~~~~~g~~~~a~~~~gG~HHA~~~~~~GFC~~NnvaiAa~~l~~~~ 162 (285)
.++...++++.|||+++++|++|++++||++.||+++++|++++|++|+||+|||++++++|||+|||+||||++|++.+
T Consensus 82 ~~~~~~~~l~~Dtpv~~~~~e~a~~aaGgtl~Aa~~v~~g~~~~A~~~~gG~HHA~~~~a~GFC~~NdvAiAa~~l~~~~ 161 (376)
T 4a69_A 82 TKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYH 161 (376)
T ss_dssp HHHHHHHTCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHTTTC
T ss_pred hhhhceeccCCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCcceeeeCCCCCCcCCcCCCCcchhhhHHHHHHHHHHHhC
Confidence 44556788999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CcEEEEeccccCCcchhhhhccCCCEEEEEeeecCCCCCCCCCCCccccCCCCcccEEEeeCCCCCChHHHHHHHHHH--
Q psy10342 163 PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRER-- 240 (285)
Q Consensus 163 ~rv~IvD~DvHhGnGtq~~f~~d~~V~~~SiH~~~~~fyP~~G~~~e~G~g~g~g~~~Nvpl~~g~~d~~y~~~~~~~-- 240 (285)
+||+|||||||||||||+||++||+|+|+|+|++++.|||+||..+|+|.|.|+|+++|||||+|++|++|+++|+++
T Consensus 162 ~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~fPgtG~~~e~G~g~g~g~~vNvPL~~G~~D~~yl~~~~~~l~ 241 (376)
T 4a69_A 162 PRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVIN 241 (376)
T ss_dssp SCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECSTTCTTCCCCTTCCCCGGGTTSEEEEEECTTCBHHHHHHHHHHHHH
T ss_pred CcEEEEeccCCCCcchhhHhcCCCCEEEEecccCCCcCCCCCCCccccCCCCCCceeEeeecCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998899999999999999999999999999999999999999864
Q ss_pred --HhccCCcEEEEcCCc------cccCccccCHHHHHHHHHHHHhhccCCC
Q psy10342 241 --VHSLLPFVFVVFFSS------GLGKLFRFSSKTIFFCANFLAKRKSSSV 283 (285)
Q Consensus 241 --l~~~~Pdlivv~aG~------plg~~~~ls~~g~~~~~~~l~~~~~~~~ 283 (285)
+++|+||+||+|||| ||| +|+||.+||.+++++|++++.|++
T Consensus 242 p~~~~f~Pd~IvvsaG~Da~~~DpLg-~l~Lt~~g~~~~~~~l~~~~~p~v 291 (376)
T 4a69_A 242 QVVDFYQPTCIVLQCGADSLGCDRLG-CFNLSIRGHGECVEYVKSFNIPLL 291 (376)
T ss_dssp HHHHHHCCSEEEEECCGGGBTTCSSC-CCBBCHHHHHHHHHHHHTTCCCEE
T ss_pred HHHHHhCCCEEEEeCcccCCCCCccc-CeecCHHHHHHHHHHHHHcCCCEE
Confidence 566799999999999 999 999999999999999999887653
No 2
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.3e-85 Score=610.59 Aligned_cols=279 Identities=52% Similarity=0.972 Sum_probs=262.5
Q ss_pred CCcEEEEEcccccCCCCCCCCCCChhHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCCHHHHHHHHhcCCCchhhh
Q psy10342 3 NKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEH 82 (285)
Q Consensus 3 ~~~v~~iy~~~~~~~~~~~~Hpe~p~R~~~i~~~L~~~gl~~~~~~~~~~~as~e~L~~vHs~~Yv~~l~~~~~~~~~~~ 82 (285)
++||+|+|||+|+.|.++++|||+|.|+++++++|+++|+++.+++++|++|+.++|++|||++||++|++.++.+..++
T Consensus 2 ~~~v~~~y~~~~~~~~~g~~HPe~P~Rl~~i~~~L~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~~~ 81 (367)
T 3max_A 2 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEY 81 (367)
T ss_dssp CCCEEEECCGGGGGCCCCTTCSCCTHHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHCCGGGGGGC
T ss_pred CCeEEEEECccccCcCCCCCCCCCHHHHHHHHHHHHhcCCcccCeeeCCCCCCHHHHHhhCCHHHHHHHHHhCccccchh
Confidence 67999999999999999999999999999999999999999999999999999999999999999999998876554333
Q ss_pred hhhhcccccCCCCCCChhHHHHHHHHhhHHHHHHHHHhcCccCeEEeCCCCCCCCCCCCCCCccccchHHHHHHHHHhcC
Q psy10342 83 TKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYH 162 (285)
Q Consensus 83 ~~~~~~~~~~~d~~~~~~~~~~a~~a~g~~l~aa~~~~~g~~~~a~~~~gG~HHA~~~~~~GFC~~NnvaiAa~~l~~~~ 162 (285)
.++...++++.|||+++++|++|++++||++.||+++.+++.++|++||||+|||++++++|||+|||+||||++|++..
T Consensus 82 ~~~~~~~~l~~Dtp~~~~~~e~a~~aaGgsl~aa~~v~~~~~~~Ai~~pgG~HHA~~~~a~GFC~~NdvaiAa~~l~~~~ 161 (367)
T 3max_A 82 SKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH 161 (367)
T ss_dssp HHHHHHTTCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBCSCHHHHHHHHHTTTC
T ss_pred hhHhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceEecCCCCCCcCCcCCCCCchhhhHHHHHHHHHHHcC
Confidence 34456688899999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CcEEEEeccccCCcchhhhhccCCCEEEEEeeecCCCCCCCCCCCccccCCCCcccEEEeeCCCCCChHHHHHHHHHH--
Q psy10342 163 PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRER-- 240 (285)
Q Consensus 163 ~rv~IvD~DvHhGnGtq~~f~~d~~V~~~SiH~~~~~fyP~~G~~~e~G~g~g~g~~~Nvpl~~g~~d~~y~~~~~~~-- 240 (285)
+||+|||||||||||||+||++||+|+|+|+|++++ |||+||..+|+|.|.|+|+++|||||+|++|++|+++|+++
T Consensus 162 ~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~-~fPgtg~~~e~G~g~g~g~~vNvPL~~g~~d~~y~~~~~~~~~ 240 (367)
T 3max_A 162 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 240 (367)
T ss_dssp SCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECSS-CTTCCCCTTCCCCGGGTTCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCCchhhHHhcCCCCEEEEecccCCC-CCCCCCCccccCCCCCCceEEEEecCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999965 89999999999999999999999999999999999999864
Q ss_pred --HhccCCcEEEEcCCc------cccCccccCHHHHHHHHHHHHhhccCCC
Q psy10342 241 --VHSLLPFVFVVFFSS------GLGKLFRFSSKTIFFCANFLAKRKSSSV 283 (285)
Q Consensus 241 --l~~~~Pdlivv~aG~------plg~~~~ls~~g~~~~~~~l~~~~~~~~ 283 (285)
+++|+||+||+|||| ||| +|+||.+||.+++++|++++.|++
T Consensus 241 ~~~~~f~Pd~ivvsaG~D~~~~Dplg-~~~lt~~g~~~~~~~~~~~~~p~v 290 (367)
T 3max_A 241 KVMEMYQPSAVVLQCGADSLSGDRLG-CFNLTVKGHAKCVEVVKTFNLPLL 290 (367)
T ss_dssp HHHHHHCCSEEEEECCGGGBTTCSSC-CCCBCHHHHHHHHHHHHTTCCCEE
T ss_pred HHHHHhCCCEEEEECCccCcCCCCCC-CeeeCHHHHHHHHHHHHhcCCCEE
Confidence 567799999999999 999 999999999999999999877654
No 3
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=100.00 E-value=2.7e-84 Score=607.15 Aligned_cols=279 Identities=37% Similarity=0.665 Sum_probs=254.4
Q ss_pred CCCCcEEEEEcccccCCCCCCCCCCChhHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCCHHHHHHHHhcCCCchh
Q psy10342 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIH 80 (285)
Q Consensus 1 m~~~~v~~iy~~~~~~~~~~~~Hpe~p~R~~~i~~~L~~~gl~~~~~~~~~~~as~e~L~~vHs~~Yv~~l~~~~~~~~~ 80 (285)
|++++|+|+|||+|+.|. .+|||+|.|+++++++|+++|+++.+++++|++|+.++|++|||++||++|++.++....
T Consensus 11 ~~~~~~~~~y~~~~~~~~--~~HPe~P~Rl~~i~~ll~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~ 88 (388)
T 3ew8_A 11 GQSLVPVYIYSPEYVSMC--DSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDD 88 (388)
T ss_dssp ---CCCEEECCHHHHHHH--TTCTTSTTHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHHHHHC--
T ss_pred CCCCcEEEEEChHHhccC--CCCCCCcHHHHHHHHHHHHcCCcccCeEeCCCCCCHHHHHhhCCHHHHHHHHHhcccccc
Confidence 568899999999999874 679999999999999999999999999999999999999999999999999976532210
Q ss_pred hhhhhhcccccCCCCCCChhHHHHHHHHhhHHHHHHHHHhcCccCeEEeCCCCCCCCCCCCCCCccccchHHHHHHHHHh
Q psy10342 81 EHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLK 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~d~~~~~~~~~~a~~a~g~~l~aa~~~~~g~~~~a~~~~gG~HHA~~~~~~GFC~~NnvaiAa~~l~~ 160 (285)
...+...++++.|||+++++|++|++++|++|.||+++++|++++|++||||+|||++++++|||+|||+||||++|++
T Consensus 89 -~~~~~~~~~lg~Dtp~~~~~~e~a~~aaGgsl~Aa~~v~~g~~~~Ai~~pGG~HHA~~~~a~GFC~~NdiaiAa~~l~~ 167 (388)
T 3ew8_A 89 -DHPDSIEYGLGYLCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRR 167 (388)
T ss_dssp -------CCSCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHTT
T ss_pred -cchhhhhccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHcCCCceeeecCCcccceeecCCCCchhhhHHHHHHHHHHh
Confidence 0122346788899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcEEEEeccccCCcchhhhhccCCCEEEEEeeecCCCCCCCCCCCccccCCCCcccEEEeeCCCCCChHHHHHHHHHH
Q psy10342 161 YHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRER 240 (285)
Q Consensus 161 ~~~rv~IvD~DvHhGnGtq~~f~~d~~V~~~SiH~~~~~fyP~~G~~~e~G~g~g~g~~~Nvpl~~g~~d~~y~~~~~~~ 240 (285)
..+||+|||||||||||||+||++||+|+|+|+|+++..|||+||..+|+|.|.|+||++|||||+|++|++|+.+|+++
T Consensus 168 ~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~fPgtG~~~e~G~g~g~g~~vNvPL~~G~~d~~y~~~~~~~ 247 (388)
T 3ew8_A 168 KFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESV 247 (388)
T ss_dssp TCSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECCTTCTTCCCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHHH
T ss_pred cCCeEEEEecCCCCChhHHHHhccCCCEEEEecCCCCCCCCCCCCCcccccCCCCcceeeeccCCCCCCHHHHHHHHHHH
Confidence 88999999999999999999999999999999999987899999999999999999999999999999999999999854
Q ss_pred ----HhccCCcEEEEcCCc------cccCccccCHHHHHHHHHHHHhhccCCC
Q psy10342 241 ----VHSLLPFVFVVFFSS------GLGKLFRFSSKTIFFCANFLAKRKSSSV 283 (285)
Q Consensus 241 ----l~~~~Pdlivv~aG~------plg~~~~ls~~g~~~~~~~l~~~~~~~~ 283 (285)
+++|+||+||||||| ||| +|+||.+||.+++++|+++++|++
T Consensus 248 l~p~~~~F~PdlIvvsaG~Da~~~DpLg-~l~lt~~g~~~~~~~l~~~~~p~l 299 (388)
T 3ew8_A 248 LKEVYQAFNPKAVVLQLGADTIAGDPMC-SFNMTPVGIGKCLKYILQWQLATL 299 (388)
T ss_dssp HHHHHHHHCCSEEEEECCSTTBTTCTTC-CCCBCHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhCCCEEEEECCccCCCCCCCC-CCcCCHHHHHHHHHHHHhcCCCEE
Confidence 567799999999999 999 999999999999999999887754
No 4
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=100.00 E-value=6.4e-82 Score=592.74 Aligned_cols=274 Identities=26% Similarity=0.400 Sum_probs=253.1
Q ss_pred cEEEEEcccccCCCCCCCCCCChhHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCCHHHHHHHHhcCCCchhhhhh
Q psy10342 5 TVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTK 84 (285)
Q Consensus 5 ~v~~iy~~~~~~~~~~~~Hpe~p~R~~~i~~~L~~~gl~~~~~~~~~~~as~e~L~~vHs~~Yv~~l~~~~~~~~~~~~~ 84 (285)
+|+++|||+|..|.+++.|||+|.|+++++++|++.|+++.+++++|++|+.++|++|||++||++|++.+..... ..+
T Consensus 3 ~t~~vy~~~~~~h~~g~~Hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~at~~~l~~vH~~~Yv~~l~~~~~~~~~-~~~ 81 (375)
T 1c3p_A 3 KVKLIGTLDYGKYRYPKNHPLKIPRVSLLLRFKDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLMEAERCQCV-PKG 81 (375)
T ss_dssp CEEEEECGGGGGSCCCTTCGGGSCCHHHHHHHHHHTTCCCGGGEEECCCCCHHHHTTTSCHHHHHHHHHHHHHTSC-CTT
T ss_pred eEEEEECHHHcCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCeEeCCCCCCHHHHHHhCCHHHHHHHHHhccccCC-ChH
Confidence 7999999999999999999999999999999999999999999999999999999999999999999876531100 001
Q ss_pred hhccccc-CCCCCCChhHHHHHHHHhhHHHHHHHHHhcCccCeEEeCCCCCCCCCCCCCCCccccchHHHHHHHHHhcC-
Q psy10342 85 FLCQFAS-GEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYH- 162 (285)
Q Consensus 85 ~~~~~~~-~~d~~~~~~~~~~a~~a~g~~l~aa~~~~~g~~~~a~~~~gG~HHA~~~~~~GFC~~NnvaiAa~~l~~~~- 162 (285)
+...+++ +.|||+++++|++|++++|+++.|++++++|+ +|+++|||+|||++++++|||+|||+||||++|++++
T Consensus 82 ~~~~~~l~~~dtp~~~~~~~~a~~aaGg~l~aa~~v~~g~--~a~~ppGG~HHA~~~~a~GFC~fNnvAiAa~~l~~~g~ 159 (375)
T 1c3p_A 82 AREKYNIGGYENPVSYAMFTGSSLATGSTVQAIEEFLKGN--VAFNPAGGMHHAFKSRANGFCYINNPAVGIEYLRKKGF 159 (375)
T ss_dssp HHHHHCCSSSSSCSSTTTTHHHHHHHHHHHHHHHHHHTTC--EEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHHHTTC
T ss_pred HhhccccCCCCcccChhHHHHHHHHhhHHHHHHHHHHcCC--ceeecCcccceeeeccCCCceeecHHHHHHHHHHHhCC
Confidence 2245666 68999999999999999999999999999987 8999999999999999999999999999999999886
Q ss_pred CcEEEEeccccCCcchhhhhccCCCEEEEEeeecCCCCCCCCCCCcccc-CCCCcccEEEeeCCCCCChHHHHHHHHH--
Q psy10342 163 PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIG-AEGGRYYSVNVRNRDLSPHSSHKRMFRE-- 239 (285)
Q Consensus 163 ~rv~IvD~DvHhGnGtq~~f~~d~~V~~~SiH~~~~~fyP~~G~~~e~G-~g~g~g~~~Nvpl~~g~~d~~y~~~~~~-- 239 (285)
+||+|||||||||||||+||++||+|+|+|+|+++..|||+||..+|+| .|.|+|+++|||||+|++|++|+++|++
T Consensus 160 ~RV~IvD~DvHHGnGtq~iF~~dp~Vl~~SiH~~~~~ffPgtG~~~e~G~~g~g~g~~vNvPL~~g~~D~~yl~a~~~~l 239 (375)
T 1c3p_A 160 KRILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEGKGKGYNLNIPLPKGLNDNEFLFALEKSL 239 (375)
T ss_dssp CCEEEEECSSSCCHHHHHHHTTCSSEEEEEEEECTTTSTTSSSCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHHHH
T ss_pred CeEEEEecCCCCCHHHHHHhccCCCEEEEecccCCCCCCCCCCCccccCCcCCCCceEEEEeCCCCCCHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999988999999999999 9999999999999999999999999885
Q ss_pred --HHhccCCcEEEEcCCc------cccCccccCHHHHHHHHHHHHhhccCC
Q psy10342 240 --RVHSLLPFVFVVFFSS------GLGKLFRFSSKTIFFCANFLAKRKSSS 282 (285)
Q Consensus 240 --~l~~~~Pdlivv~aG~------plg~~~~ls~~g~~~~~~~l~~~~~~~ 282 (285)
++++|+||+||||||| ||| +|+||.+||.+++++|++++.|+
T Consensus 240 ~p~l~~F~PdlIvvsaG~Da~~~DpLg-~l~lt~~g~~~~~~~l~~~a~~v 289 (375)
T 1c3p_A 240 EIVKEVFEPEVYLLQLGTDPLLEDYLS-KFNLSNVAFLKAFNIVREVFGEG 289 (375)
T ss_dssp HHHHHHCCCSEEEEECCSTTBTTCTTC-SCCBCHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHhCCCEEEEECCccccCCCCCC-CcccCHHHHHHHHHHHHHhccce
Confidence 4567899999999999 999 99999999999999999998774
No 5
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A*
Probab=100.00 E-value=5.2e-80 Score=578.72 Aligned_cols=265 Identities=23% Similarity=0.279 Sum_probs=247.1
Q ss_pred cEEEEEcccccCCCCCCC----------------CCCChhHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCCHHHH
Q psy10342 5 TVSYFYNPDVGNFHYGAK----------------HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYI 68 (285)
Q Consensus 5 ~v~~iy~~~~~~~~~~~~----------------Hpe~p~R~~~i~~~L~~~gl~~~~~~~~~~~as~e~L~~vHs~~Yv 68 (285)
+|+++|||+|..|.++.. |||+|.|+++++++|++.|+.+.+++++|++|+.++|++|||++||
T Consensus 2 ~t~~~y~~~~~~h~~~~~~~~~~~~g~~~~~~~~Hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~~~l~~vH~~~Yv 81 (369)
T 1zz1_A 2 AIGYVWNTLYGWVDTGTGSLAAANLTARMQPISHHLAHPDTKRRFHELVCASGQIEHLTPIAAVAATDADILRAHSAAHL 81 (369)
T ss_dssp CEEEECCGGGGGCCCCSSSSSCCBTTTTBCCCSSCTTCTHHHHHHHHHHHHTTGGGGSEECCCCCCCHHHHHTTSCHHHH
T ss_pred eEEEEEchHHcccCCCCcccccccccccccccCCCCCCHHHHHHHHHHHHhcCCCccceEeCCCcCCHHHHHHhccHHHH
Confidence 689999999999999888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCchhhhhhhhcccccCC-CCCCChhHHHHHHHHhhHHHHHHHHHhcCcc--CeEEeCCCCCCCCCCCCCCCc
Q psy10342 69 DFLHTVSPDKIHEHTKFLCQFASGE-DCPIFHGLYDFCSMYTGASLEGAIQLNNNCC--DIAINWSGGLHHAKKSEASGF 145 (285)
Q Consensus 69 ~~l~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~a~~a~g~~l~aa~~~~~g~~--~~a~~~~gG~HHA~~~~~~GF 145 (285)
++|++.+.. ...+.++. |||+++++|++|++++|+++.|++++++|++ .+|++|||| |||++++++||
T Consensus 82 ~~l~~~~~~--------~~~~~l~~~dtp~~~~~~~~a~~aaG~~l~aa~~v~~g~~~~afa~~rppG-HHA~~~~a~GF 152 (369)
T 1zz1_A 82 ENMKRVSNL--------PTGGDTGDGITMMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPG-HHAPHNAAMGF 152 (369)
T ss_dssp HHHHHHHHS--------TTCEECSSSSCEECTTTHHHHHHHHHHHHHHHHHHHTTSCSEEEECCSSCC-TTCCTTCCBTT
T ss_pred HHHHHhCcc--------ccceecCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhCCCcceEEEecCCc-cCcCCCCCCCc
Confidence 999976531 01344677 9999999999999999999999999999975 467899999 99999999999
Q ss_pred cccchHHHHHHHHHhcC--CcEEEEeccccCCcchhhhhccCCCEEEEEeeecCCCCCC-CCCCCccccCCCCcccEEEe
Q psy10342 146 CYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFP-CSGDMYEIGAEGGRYYSVNV 222 (285)
Q Consensus 146 C~~NnvaiAa~~l~~~~--~rv~IvD~DvHhGnGtq~~f~~d~~V~~~SiH~~~~~fyP-~~G~~~e~G~g~g~g~~~Nv 222 (285)
|+|||+||||++|++++ +||+|||||||||||||+||++||+|+|+|+|+++ ||| +||..+|+|.|.|+|+++||
T Consensus 153 C~fNnvAiAa~~l~~~~g~~RV~IvD~DvHHGnGTq~iF~~d~~Vl~~SiH~~~--~yP~~tG~~~e~G~g~g~g~~vNv 230 (369)
T 1zz1_A 153 CIFNNTSVAAGYARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQHL--CFPPDSGYSTERGAGNGHGYNINV 230 (369)
T ss_dssp BSSCHHHHHHHHHHHTSCCSCEEEEECSSSCCHHHHHHTTTCTTEEEEEEEETT--SSSTTCCCTTCCCCGGGTTCEEEE
T ss_pred hHhhHHHHHHHHHHHhcCCCeEEEEecCCCCchhhhHHhcCCCCEEEEeccCCC--CCCCCCCcccccCCCCCCceEEee
Confidence 99999999999999874 89999999999999999999999999999999997 699 99999999999999999999
Q ss_pred eCCCCCChHHHHHHHHH----HHhccCCcEEEEcCCc------cccCccccCHHHHHHHHHHHHhhccC
Q psy10342 223 RNRDLSPHSSHKRMFRE----RVHSLLPFVFVVFFSS------GLGKLFRFSSKTIFFCANFLAKRKSS 281 (285)
Q Consensus 223 pl~~g~~d~~y~~~~~~----~l~~~~Pdlivv~aG~------plg~~~~ls~~g~~~~~~~l~~~~~~ 281 (285)
|||+|++|++|+.+|++ ++++|+||+||||||| ||| +|+||.+||.+++++|++++.+
T Consensus 231 PL~~g~~d~~yl~~~~~~v~p~l~~f~PdlIvvsaG~Da~~~DpLg-~l~lt~~g~~~~~~~l~~~a~~ 298 (369)
T 1zz1_A 231 PLPPGSGNAAYLHAMDQVVLPALRAYRPQLIIVGSGFDASMLDPLA-RMMVTADGFRQMARRTIDCAAD 298 (369)
T ss_dssp EECTTCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCTTC-CCBBCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccCCCCCCCC-CcccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999885 5677899999999999 999 9999999999999999998743
No 6
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=100.00 E-value=2.4e-79 Score=569.08 Aligned_cols=272 Identities=22% Similarity=0.354 Sum_probs=246.4
Q ss_pred EEEEEcccccCCCCCC--------CCCCChhHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCCHHHHHHHHhcCCC
Q psy10342 6 VSYFYNPDVGNFHYGA--------KHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPD 77 (285)
Q Consensus 6 v~~iy~~~~~~~~~~~--------~Hpe~p~R~~~i~~~L~~~gl~~~~~~~~~~~as~e~L~~vHs~~Yv~~l~~~~~~ 77 (285)
..++|||+|..|..+. .|||+|+|+++|+++|++.|+ ++++|++|+.|+|++|||++||++|++.++.
T Consensus 22 M~~~~~~~~~~H~~~~~~~~G~~~~HPE~P~Rl~~i~~~L~~~gl----~~~~p~~At~e~L~~vHs~~YI~~l~~~~~~ 97 (362)
T 3men_A 22 MLTYFHPDQSLHHPRTYFSRGRMRMPQEVPERAARLVAAAFAMGF----PVREPDDFGIAPIAAVHDTHYLRFLETVHRE 97 (362)
T ss_dssp CEEECCGGGGGCCCCCEEETTEEECCCSCTHHHHHHHHHHHHTTC----CEECCCCCCSHHHHTTSCHHHHHHHHHHHHH
T ss_pred eEEEEChHHHhhCCccccccCCcCCCCCChHHHHHHHHHHHhCCC----eEeCCCCCCHHHHHHhCCHHHHHHHHHhhhh
Confidence 4699999999998764 699999999999999999997 7899999999999999999999999876421
Q ss_pred chh----------------------hhhhhhcccccCCCCCCChhHHHHHHHHhhHHHHHHHHHhcCc-cCeEEeCCCCC
Q psy10342 78 KIH----------------------EHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC-CDIAINWSGGL 134 (285)
Q Consensus 78 ~~~----------------------~~~~~~~~~~~~~d~~~~~~~~~~a~~a~g~~l~aa~~~~~g~-~~~a~~~~gG~ 134 (285)
+.. ....+.+.+.++.|||+++++|++|++++|+++.|++++++|+ ..+|++||||
T Consensus 98 ~~~~~~~~~~e~~p~~~p~~~~~p~~~~~~~g~~~~d~Dtpv~~~~~~aa~~aaG~~l~aa~~v~~g~~~afal~rPpG- 176 (362)
T 3men_A 98 WKAMPEDWGDEAMSNIFVREPNALRGVLAQAARHLADGSCPVGEHTWRAAYWSAQSALAAAAAVRDGAPAAYALCRPPG- 176 (362)
T ss_dssp HHTSCGGGCSSBCCCBCCCSSCCCCSHHHHHHHHBCBTTCCBCTTHHHHHHHHHHHHHHHHHHHHTTCSEEEECCSSCC-
T ss_pred hhhcccccccccccccccccccccccccccccccccCCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCC-
Confidence 100 0001223466789999999999999999999999999999985 5688999999
Q ss_pred CCCCCCCCCCccccchHHHHHHHHHhcCCcEEEEeccccCCcchhhhhccCCCEEEEEeeecCCCCCCC-CCCCccccCC
Q psy10342 135 HHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPC-SGDMYEIGAE 213 (285)
Q Consensus 135 HHA~~~~~~GFC~~NnvaiAa~~l~~~~~rv~IvD~DvHhGnGtq~~f~~d~~V~~~SiH~~~~~fyP~-~G~~~e~G~g 213 (285)
|||++++++|||+|||+||||++|+++.+||+|||||||||||||+||++||+|+|+|+|+++..|||+ ||..+|+|.|
T Consensus 177 HHA~~~~a~GFC~fNnvAiAa~~l~~~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~yP~~tG~~~e~G~g 256 (362)
T 3men_A 177 HHARVDAAGGFCYLNNAAIAAQALRARHARVAVLDTDMHHGQGIQEIFYARRDVLYVSIHGDPTNFYPAVAGFDDERGAG 256 (362)
T ss_dssp TTCBTTBBBTTBSSCHHHHHHHHHTTTCSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECCTTSTTCSSCCTTCCCSG
T ss_pred CCCCCCCCCCccccCHHHHHHHHHHHcCCeEEEEeCcCCCchhHhHHhcCCCCEEEEEecCCCccCCCCCCCccccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999998779998 9999999999
Q ss_pred CCcccEEEeeCCCCCChHHHHHHHHHH---HhccCCcEEEEcCCc------cccCccccCHHHHHHHHHHHHhhccCCC
Q psy10342 214 GGRYYSVNVRNRDLSPHSSHKRMFRER---VHSLLPFVFVVFFSS------GLGKLFRFSSKTIFFCANFLAKRKSSSV 283 (285)
Q Consensus 214 ~g~g~~~Nvpl~~g~~d~~y~~~~~~~---l~~~~Pdlivv~aG~------plg~~~~ls~~g~~~~~~~l~~~~~~~~ 283 (285)
.|+|+++|||||+|++|++|+++|+++ +++|+||+||||||| ||| +|+||++||.+++++|++++.|+.
T Consensus 257 ~g~g~~vNvPL~~g~~d~~yl~~~~~~l~~l~~f~PdlIvvsaG~Da~~~Dplg-~l~lt~~~~~~~~~~l~~~~~~~v 334 (362)
T 3men_A 257 EGLGYNVNLPMPHGSSEAAFFERVDDALRELRRFAPDALVLSLGFDVYRDDPQS-QVAVTTDGFGRLGHLIGALRLPTV 334 (362)
T ss_dssp GGTTSEEEEEECTTBCHHHHHHHHHHHHHHHHHHCCSEEEEEECSTTBTTCTTC-CBCBCHHHHHHHHHHHHTTCCCEE
T ss_pred CCCceeEeeccCCCCChHHHHHHHHHHHHHHHhcCCCEEEEECcccCcCCCCCC-CccCCHHHHHHHHHHHHhhCCCEE
Confidence 999999999999999999999999965 456799999999999 999 999999999999999999887653
No 7
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=100.00 E-value=1.4e-79 Score=567.83 Aligned_cols=271 Identities=20% Similarity=0.299 Sum_probs=245.5
Q ss_pred EEEEcccccCCCCCC--------CCCCChhHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCCHHHHHHHHhcCCCc
Q psy10342 7 SYFYNPDVGNFHYGA--------KHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDK 78 (285)
Q Consensus 7 ~~iy~~~~~~~~~~~--------~Hpe~p~R~~~i~~~L~~~gl~~~~~~~~~~~as~e~L~~vHs~~Yv~~l~~~~~~~ 78 (285)
-++|||+|..|..+. .|||+|+|+++|+++|++.|+. ++++|++|+.|+|++|||++||++|++.++.+
T Consensus 2 ~~v~~~~~~~H~~~~~~~~G~~~~HPE~P~Rl~~i~~~L~~~gl~---~~~~p~~at~e~L~~vHs~~Yi~~l~~~~~~~ 78 (341)
T 3q9b_A 2 RVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFD---DVVAPARHGLETVLKVHDAGYLNFLETAWDRW 78 (341)
T ss_dssp EEECCGGGGGCCCSCEEETTEEECCSSCTHHHHHHHHHHHHTTCC---CEECCCCCCSTTGGGTSCHHHHHHHHHHHHHH
T ss_pred EEEECcHHhccCCcccccCCCcCCCCCChHHHHHHHHHHHhCCCC---ceeCCCCCCHHHHHHhCCHHHHHHHHHhhhhh
Confidence 379999999998754 6999999999999999999985 68899999999999999999999999864211
Q ss_pred hh-----------------------hhhhhhcccccCCCCCCChhHHHHHHHHhhHHHHHHHHHhcCc-cCeEEeCCCCC
Q psy10342 79 IH-----------------------EHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC-CDIAINWSGGL 134 (285)
Q Consensus 79 ~~-----------------------~~~~~~~~~~~~~d~~~~~~~~~~a~~a~g~~l~aa~~~~~g~-~~~a~~~~gG~ 134 (285)
.. .+..+.+.+.++.|||+++++|++|++++|+++.|++++++|+ ..+|++||||
T Consensus 79 ~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~g~~~~d~dt~~~~~~~~aa~~aaG~~l~a~~~v~~g~~~afal~rppG- 157 (341)
T 3q9b_A 79 KAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPG- 157 (341)
T ss_dssp HHTTCSSCBCCCBCCCTTCCCCCCSSHHHHHHHTBSBTTCCBCTTHHHHHHHHHHHHHHHHHHHHHTCSEEEECCSSCC-
T ss_pred hhcccccccccccccccccccccccchhcccceeccCCCCCcChhHHHHHHHHHHHHHHHHHHHHhCCCceEecCCCCC-
Confidence 00 0011234577899999999999999999999999999999985 5688999999
Q ss_pred CCCCCCCCCCccccchHHHHHHHHHhc-CCcEEEEeccccCCcchhhhhccCCCEEEEEeeecCCCCCCC-CCCCccccC
Q psy10342 135 HHAKKSEASGFCYVNDIVIAILELLKY-HPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPC-SGDMYEIGA 212 (285)
Q Consensus 135 HHA~~~~~~GFC~~NnvaiAa~~l~~~-~~rv~IvD~DvHhGnGtq~~f~~d~~V~~~SiH~~~~~fyP~-~G~~~e~G~ 212 (285)
|||++++++|||+|||+||||++|+++ .+||+|||||||||||||+||++||+|+|+|+|+++..|||+ ||..+|+|.
T Consensus 158 HHA~~~~a~GFC~~NnvaiAa~~l~~~g~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~yP~~tG~~~e~G~ 237 (341)
T 3q9b_A 158 HHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGK 237 (341)
T ss_dssp TTCBTTBBBTTBSSCHHHHHHHHHHHTTCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGSTTCSSCCTTCCCC
T ss_pred CCCCCCCCCCccccCHHHHHHHHHHHcCCCeEEEEecCCCCCcchhHHhcCCCCEEEEeccCCCccCCCCCCCcccccCC
Confidence 999999999999999999999999998 599999999999999999999999999999999997779999 999999999
Q ss_pred CCCcccEEEeeCCCCCChHHHHHHHHHHH---hccCCcEEEEcCCc------cccCccccCHHHHHHHHHHHHhhccCC
Q psy10342 213 EGGRYYSVNVRNRDLSPHSSHKRMFRERV---HSLLPFVFVVFFSS------GLGKLFRFSSKTIFFCANFLAKRKSSS 282 (285)
Q Consensus 213 g~g~g~~~Nvpl~~g~~d~~y~~~~~~~l---~~~~Pdlivv~aG~------plg~~~~ls~~g~~~~~~~l~~~~~~~ 282 (285)
|.|+|+++|||||+|++|++|+.+|++++ ++|+||+||||||| ||| +|+||++||.+++++|++++.|+
T Consensus 238 g~g~g~~vNvpL~~g~~d~~y~~~~~~~l~~l~~f~Pd~ivvsaG~D~~~~Dplg-~~~lt~~~~~~~~~~l~~~~~~~ 315 (341)
T 3q9b_A 238 GAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPIS-FFKLTSPDYITMGRTIAASGVPL 315 (341)
T ss_dssp GGGTTCEEEEEECTTCBHHHHHHHHHHHHHHHHHHTCSCEEEEECCTTBTTCTTC-CCBBCTTHHHHHHHHHHTTSSCE
T ss_pred CCCCceeEeeecCCCCChHHHHHHHHHHHHHHHhhCCCEEEEeCCccccCCCCCC-CccCCHHHHHHHHHHHHHhCCCE
Confidence 99999999999999999999999999654 56799999999999 999 99999999999999999988765
No 8
>2pqp_A HD7A, histone deacetylase 7A; HDAC, structural genomics, structural genomics consortium, SGC; HET: TSN; 1.80A {Homo sapiens} PDB: 2pqo_A* 2nvr_A 3c0y_A 3c0z_A 3c10_A* 2vqm_A* 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A*
Probab=100.00 E-value=3.8e-76 Score=555.30 Aligned_cols=274 Identities=25% Similarity=0.342 Sum_probs=241.2
Q ss_pred CcEEEEEcccccCCC----CCCCCCCChhHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCCHHHHHHHHhcCCCch
Q psy10342 4 KTVSYFYNPDVGNFH----YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKI 79 (285)
Q Consensus 4 ~~v~~iy~~~~~~~~----~~~~Hpe~p~R~~~i~~~L~~~gl~~~~~~~~~~~as~e~L~~vHs~~Yv~~l~~~~~~~~ 79 (285)
++|+++|||+|+.|. +++.|||+|.|+++|+++|++.|+++++++++|++|+.|||++|||++||+.+........
T Consensus 36 ~~t~~vyd~~~l~H~~~~~~~~~HPE~P~Rl~~i~~~L~~~Gl~~~~~~~~p~~At~eeL~~vHs~~YI~~~~~~~l~~~ 115 (421)
T 2pqp_A 36 FTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRL 115 (421)
T ss_dssp TCEEEECCGGGGGCCCTTCCTTSCSSCTHHHHHHHHHHHHTTCGGGSEEECCCCCCHHHHTTTSCHHHHHHHHCCTTCSC
T ss_pred CeEEEEECHHHHhhccCCCCCCCCCCCcHHHHHHHHHHHhcCCcccCeeeCCCCCCHHHHHhcCCHHHHHhhhcchhhhh
Confidence 579999999999997 5788999999999999999999999999999999999999999999999986543211110
Q ss_pred h----hh----hhh------hcccccCCCCCCC-hhHHHHHHHHhhHHHHHHHHHhcCcc--CeEEeCCCCCCCCCCCCC
Q psy10342 80 H----EH----TKF------LCQFASGEDCPIF-HGLYDFCSMYTGASLEGAIQLNNNCC--DIAINWSGGLHHAKKSEA 142 (285)
Q Consensus 80 ~----~~----~~~------~~~~~~~~d~~~~-~~~~~~a~~a~g~~l~aa~~~~~g~~--~~a~~~~gG~HHA~~~~~ 142 (285)
+ +. ... .+..+++.|++++ ..+|++|++++|+++.|++++++|+. .+|++|||| |||+++++
T Consensus 116 ~~~~~~~~g~~~~~~~~~~p~gg~~~D~Dt~~~~~~s~~aa~~aaG~~~~a~~~v~~g~~~~afa~~rPpG-HHA~~~~a 194 (421)
T 2pqp_A 116 KLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPG-HHADHSTA 194 (421)
T ss_dssp CCCHHHHHHHHSCCCCEECTTSCEESSSSCEECTTTHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCSSCC-TTCBTTBC
T ss_pred hhhcccccccchhhhhhhccccCcCCCCCcccCCccHHHHHHHHHhHHHHHHHHHHcCccccceeeCCCCC-CCCCCCCC
Confidence 0 00 000 0123467788887 48999999999999999999999975 478899999 99999999
Q ss_pred CCccccchHHHHHHHHHhcC--CcEEEEeccccCCcchhhhhccCCCEEEEEeeecCC-CCCCCCCCCccccCCCCcccE
Q psy10342 143 SGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGG-GFFPCSGDMYEIGAEGGRYYS 219 (285)
Q Consensus 143 ~GFC~~NnvaiAa~~l~~~~--~rv~IvD~DvHhGnGtq~~f~~d~~V~~~SiH~~~~-~fyP~~G~~~e~G~g~g~g~~ 219 (285)
+|||+||||||||++|++++ +||+|||||||||||||+||++||+|+|+|+|++++ .|||+||..+|+|.|.|+||+
T Consensus 195 ~GFC~fNnvAiAa~~l~~~~~~~RV~ivD~DvHHGnGtq~iF~~dp~Vl~~S~H~~~~g~~yPgtG~~~e~G~g~g~g~~ 274 (421)
T 2pqp_A 195 MGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFN 274 (421)
T ss_dssp BTTBSSCHHHHHHHHHHHHSTTCCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGTSTTCCCCTTCCCCGGGTTCE
T ss_pred CcchhhCHHHHHHHHHHHhcCCCeEEEEecCCCCChhHHHHhcCCCCEEEEecccCCCCCCCCCCCChhhccCCCCccce
Confidence 99999999999999999864 899999999999999999999999999999999864 399999999999999999999
Q ss_pred EEeeCCC----CCChHHHHHHHHH----HHhccCCcEEEEcCCc--------cccCccccCHHHHHHHHHHHHhhc
Q psy10342 220 VNVRNRD----LSPHSSHKRMFRE----RVHSLLPFVFVVFFSS--------GLGKLFRFSSKTIFFCANFLAKRK 279 (285)
Q Consensus 220 ~Nvpl~~----g~~d~~y~~~~~~----~l~~~~Pdlivv~aG~--------plg~~~~ls~~g~~~~~~~l~~~~ 279 (285)
+|||||. +++|++|+.+|++ ++++|+||+||||||| ||| +|+||.++|.+++++|++++
T Consensus 275 vNvPl~~gl~~g~~d~~yl~~~~~~l~p~~~~F~PdlIvvsaG~Da~~gD~dpLg-~~~lt~~~y~~~~~~l~~~a 349 (421)
T 2pqp_A 275 VNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLG-GYHVSAKCFGYMTQQLMNLA 349 (421)
T ss_dssp EEEEECSCSSSCCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCCGGGC-CCBBCHHHHHHHHHHHTTSG
T ss_pred eccccCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeCCcccccccccccC-CceeCHHHHHHHHHHHHHHc
Confidence 9999975 5799999999985 5677899999999999 799 99999999999999999875
No 9
>2vqm_A HD4, histone deacetylase 4; inhibitor, repressor, chromatin, coiled coil, transcription regulation, UBL conjugation, chromatin regulator; HET: HA3; 1.8A {Homo sapiens} PDB: 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A* 3c10_A* 3c0z_A 3c0y_A*
Probab=100.00 E-value=3.1e-75 Score=553.87 Aligned_cols=275 Identities=25% Similarity=0.337 Sum_probs=238.0
Q ss_pred CCcEEEEEcccccCCCCC----CCCCCChhHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCCHHHHHHHHhcCCCc
Q psy10342 3 NKTVSYFYNPDVGNFHYG----AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDK 78 (285)
Q Consensus 3 ~~~v~~iy~~~~~~~~~~----~~Hpe~p~R~~~i~~~L~~~gl~~~~~~~~~~~as~e~L~~vHs~~Yv~~l~~~~~~~ 78 (285)
+++|+++||++|+.|..+ ..|||+|.|+++|+++|++.|+.+++++++|++|+.|||++|||++||++++......
T Consensus 7 ~~~Tg~vyd~~~l~H~~~~g~~~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~At~eeL~~vHs~~Yv~~~~~~~~~~ 86 (413)
T 2vqm_A 7 RFTTGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNR 86 (413)
T ss_dssp CSSEEEECCGGGCSCCCTTC-------CCCHHHHHHHHHHHHTHHHHSEEECCCCCCHHHHTTTSCHHHHHHHHSCGGGG
T ss_pred CCeEEEEEcHHHhccCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCeEeCCCCCCHHHHHHhCCHHHHHHHhcCchhh
Confidence 568999999999999754 4599999999999999999999999999999999999999999999998887543211
Q ss_pred --hh------hhhh-----hhcccccCCCCCCCh-hHHHHHHHHhhHHHHHHHHHhcCccC--eEEeCCCCCCCCCCCCC
Q psy10342 79 --IH------EHTK-----FLCQFASGEDCPIFH-GLYDFCSMYTGASLEGAIQLNNNCCD--IAINWSGGLHHAKKSEA 142 (285)
Q Consensus 79 --~~------~~~~-----~~~~~~~~~d~~~~~-~~~~~a~~a~g~~l~aa~~~~~g~~~--~a~~~~gG~HHA~~~~~ 142 (285)
.. .... ..+.+.++.|+.+++ +++++|++++|++++|++++++|+.. ||++|||| |||+++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~dt~~~~~~s~~aA~laaG~~l~a~~~v~~g~~~~afa~vrppG-HHA~~~~a 165 (413)
T 2vqm_A 87 QKLDSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPG-HHAEESTP 165 (413)
T ss_dssp CC----HHHHHHHHHEEECTTSCEEECTTSTHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCCSCC-TTCBTTBC
T ss_pred hHhhhhhhccchhhhhhccccCCcCccCCccccchhHHHHHHHHHHHHHHHHHHHhcCCccceeeeccccc-ccCcCCCC
Confidence 00 0000 012344567777765 79999999999999999999999765 56788999 99999999
Q ss_pred CCccccchHHHHHHHHHhcC--CcEEEEeccccCCcchhhhhccCCCEEEEEeeecCCC-CCCCCCCCccccCCCCcccE
Q psy10342 143 SGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG-FFPCSGDMYEIGAEGGRYYS 219 (285)
Q Consensus 143 ~GFC~~NnvaiAa~~l~~~~--~rv~IvD~DvHhGnGtq~~f~~d~~V~~~SiH~~~~~-fyP~~G~~~e~G~g~g~g~~ 219 (285)
+|||+|||+||||++|++++ +||+|||||||||||||+||++||+|+|+|+|+++++ |||+||..+|+|.|.|+|++
T Consensus 166 ~GFC~~Nnvaiaa~~~~~~~~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~f~pgtG~~~e~G~g~g~g~~ 245 (413)
T 2vqm_A 166 MGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 245 (413)
T ss_dssp BTTBSSCHHHHHHHHHHHHSCCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGCSTTCCCCTTCCCSGGGTTCE
T ss_pred CCccccchHHHHHHHHHHhcCCCeEEEEecccCCCccHHHHHhcCcccccccchhccCCCCCCCCCCHHHcCCCcccccc
Confidence 99999999999999999874 8999999999999999999999999999999998764 99999999999999999999
Q ss_pred EEeeCC----CCCChHHHHHHHHH----HHhccCCcEEEEcCCc--------cccCccccCHHHHHHHHHHHHhhc
Q psy10342 220 VNVRNR----DLSPHSSHKRMFRE----RVHSLLPFVFVVFFSS--------GLGKLFRFSSKTIFFCANFLAKRK 279 (285)
Q Consensus 220 ~Nvpl~----~g~~d~~y~~~~~~----~l~~~~Pdlivv~aG~--------plg~~~~ls~~g~~~~~~~l~~~~ 279 (285)
+||||+ ++++|++|+.+|++ ++++|+||+||||||| ||| +|+||.+||.+++++|++++
T Consensus 246 ~n~pl~~g~~~~~~D~~y~~~~~~~v~p~~~~f~PdlivvsaG~Da~~~d~D~lg-~~~lt~~~~~~~~~~l~~~a 320 (413)
T 2vqm_A 246 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLG-GYNLSARCFGYLTKQLMGLA 320 (413)
T ss_dssp EEEEECSCSSSCCCHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBSSCTTTTC-CCCBCHHHHHHHHHHHHTSG
T ss_pred cccccccccCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcCCCCCCCC-CcccCHHHHHHHHHHHHHhc
Confidence 999987 46889999999985 5577899999999999 599 99999999999999999985
No 10
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=87.03 E-value=1.5 Score=35.56 Aligned_cols=58 Identities=7% Similarity=-0.051 Sum_probs=40.4
Q ss_pred EEEeeCCCCCChHHHHHHHHHHHhccCCcEEEEcCCc-cccCccccCHHH----HHHHHHHHHhhcc
Q psy10342 219 SVNVRNRDLSPHSSHKRMFRERVHSLLPFVFVVFFSS-GLGKLFRFSSKT----IFFCANFLAKRKS 280 (285)
Q Consensus 219 ~~Nvpl~~g~~d~~y~~~~~~~l~~~~Pdlivv~aG~-plg~~~~ls~~g----~~~~~~~l~~~~~ 280 (285)
..|.....+++....++.+++.+...+||+|++..|. .+. .+.+. +.++.+.+++.+.
T Consensus 48 v~~~~~~~~~~~~~~~~~~~~~~~~~~pd~Vvi~~G~ND~~----~~~~~~~~~l~~ii~~l~~~~p 110 (200)
T 4h08_A 48 VGRLSNSKSVGDPALIEELAVVLKNTKFDVIHFNNGLHGFD----YTEEEYDKSFPKLIKIIRKYAP 110 (200)
T ss_dssp EEEEEESCCTTCHHHHHHHHHHHHHSCCSEEEECCCSSCTT----SCHHHHHHHHHHHHHHHHHHCT
T ss_pred EEEEeccCCccHHHHHHHHHHHHhcCCCCeEEEEeeeCCCC----CCHHHHHHHHHHHHHHHhhhCC
Confidence 4455555566777788888888888999999999997 333 45444 4556666666543
No 11
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=69.58 E-value=5.4 Score=32.61 Aligned_cols=52 Identities=8% Similarity=-0.042 Sum_probs=37.9
Q ss_pred CChHHHHHHHHHHHhccCCcEEEEcCCc-cccCccccCHHHHHHHHHHHHhhc
Q psy10342 228 SPHSSHKRMFRERVHSLLPFVFVVFFSS-GLGKLFRFSSKTIFFCANFLAKRK 279 (285)
Q Consensus 228 ~~d~~y~~~~~~~l~~~~Pdlivv~aG~-plg~~~~ls~~g~~~~~~~l~~~~ 279 (285)
..-.+.+..++..+...+||+||+..|. .+......+.+.+.++.+.+++.+
T Consensus 66 ~~~~~~~~~l~~~l~~~~pd~vvi~~G~ND~~~~~~~~~~~l~~li~~i~~~~ 118 (215)
T 2vpt_A 66 WTIPQIASNINNWLNTHNPDVVFLWIGGNDLLLNGNLNATGLSNLIDQIFTVK 118 (215)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHhhccCCCEEEEEccccccCCCCChhHHHHHHHHHHHHHhC
Confidence 3445666677777777899999999999 222134456788999999998863
No 12
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=65.07 E-value=6.5 Score=30.92 Aligned_cols=50 Identities=8% Similarity=-0.053 Sum_probs=32.4
Q ss_pred CCChHHHHHHHHHHHhccCCcEEEEcCCc-cccCccccCHHH----HHHHHHHHHhh
Q psy10342 227 LSPHSSHKRMFRERVHSLLPFVFVVFFSS-GLGKLFRFSSKT----IFFCANFLAKR 278 (285)
Q Consensus 227 g~~d~~y~~~~~~~l~~~~Pdlivv~aG~-plg~~~~ls~~g----~~~~~~~l~~~ 278 (285)
|.+-.+.+..++..+...+||+|++..|. .+. .+.+.+. +.++.+.+++.
T Consensus 48 G~~~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~--~~~~~~~~~~~~~~~i~~~~~~ 102 (185)
T 3hp4_A 48 GETSGGALRRLDALLEQYEPTHVLIELGANDGL--RGFPVKKMQTNLTALVKKSQAA 102 (185)
T ss_dssp TCCHHHHHHHHHHHHHHHCCSEEEEECCHHHHH--TTCCHHHHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHhhcCCCEEEEEeecccCC--CCcCHHHHHHHHHHHHHHHHHc
Confidence 33455667777777777899999999998 332 1244444 44555555554
No 13
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=63.89 E-value=7.7 Score=31.67 Aligned_cols=59 Identities=15% Similarity=0.106 Sum_probs=35.1
Q ss_pred EEEeeCCCCCChHHHHHHHHHHHhccCCcEEEEcCCc-cccC-----ccccCHHHHHHHHHHHHhh
Q psy10342 219 SVNVRNRDLSPHSSHKRMFRERVHSLLPFVFVVFFSS-GLGK-----LFRFSSKTIFFCANFLAKR 278 (285)
Q Consensus 219 ~~Nvpl~~g~~d~~y~~~~~~~l~~~~Pdlivv~aG~-plg~-----~~~ls~~g~~~~~~~l~~~ 278 (285)
.+|-.+.. .+-...+.-|++.+...+||+||+..|. .+.. ......+.+..+.+.+++-
T Consensus 53 viN~Gi~G-~tt~~~l~r~~~~v~~~~Pd~vvi~~G~ND~~~~~~~~~~~~~~~~l~~ii~~~~~~ 117 (209)
T 4hf7_A 53 YIGRGISG-QTSYQFLLRFREDVINLSPALVVINAGTNDVAENTGAYNEDYTFGNIASMAELAKAN 117 (209)
T ss_dssp EEEEECTT-CCHHHHHHHHHHHTGGGCCSEEEECCCHHHHTTSSSSCCHHHHHHHHHHHHHHHHHT
T ss_pred EEEeccCc-ccHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccccccccHHHHHHHHHHhhHHHhcc
Confidence 35655543 2344556667776677899999999998 3220 1222334556666666553
No 14
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=57.76 E-value=26 Score=27.55 Aligned_cols=56 Identities=9% Similarity=-0.079 Sum_probs=34.3
Q ss_pred EEeeCCCCCChHHHHHHHHHHHhccCCcEEEEcCCc-cccCccccCHHH----HHHHHHHHHhh
Q psy10342 220 VNVRNRDLSPHSSHKRMFRERVHSLLPFVFVVFFSS-GLGKLFRFSSKT----IFFCANFLAKR 278 (285)
Q Consensus 220 ~Nvpl~~g~~d~~y~~~~~~~l~~~~Pdlivv~aG~-plg~~~~ls~~g----~~~~~~~l~~~ 278 (285)
+|.... |.+-.+.+..++..+...+||+||+..|. .+. .+.+.+. +.++.+.+++.
T Consensus 38 ~n~g~~-G~~~~~~~~~~~~~~~~~~pd~Vii~~G~ND~~--~~~~~~~~~~~l~~li~~~~~~ 98 (190)
T 1ivn_A 38 VNASIS-GDTSQQGLARLPALLKQHQPRWVLVELGGNDGL--RGFQPQQTEQTLRQILQDVKAA 98 (190)
T ss_dssp EECCCT-TCCHHHHHHHHHHHHHHHCCSEEEEECCTTTTS--SSCCHHHHHHHHHHHHHHHHHT
T ss_pred EecCCC-CchHHHHHHHHHHHHHhcCCCEEEEEeeccccc--cCCCHHHHHHHHHHHHHHHHHc
Confidence 444443 23344566667777777899999999998 443 1344444 44555555543
No 15
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=53.29 E-value=39 Score=26.14 Aligned_cols=54 Identities=13% Similarity=0.025 Sum_probs=34.5
Q ss_pred EEEeeCCCCCChHHHHHHHHHHHhccCCcEEEEcCCc-cccCccccCHHHHHHHHH
Q psy10342 219 SVNVRNRDLSPHSSHKRMFRERVHSLLPFVFVVFFSS-GLGKLFRFSSKTIFFCAN 273 (285)
Q Consensus 219 ~~Nvpl~~g~~d~~y~~~~~~~l~~~~Pdlivv~aG~-plg~~~~ls~~g~~~~~~ 273 (285)
.+|...+ |.+-.+.+..+++.+...+||+||++.|. .+....+.+.+.|....+
T Consensus 42 v~n~g~~-G~~~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~l~ 96 (195)
T 1yzf_A 42 VINAGMP-GDTTEDGLKRLNKEVLIEKPDEVVIFFGANDASLDRNITVATFRENLE 96 (195)
T ss_dssp EEEEECT-TCCHHHHHHHHHHHTGGGCCSEEEEECCTTTTCTTSCCCHHHHHHHHH
T ss_pred EEeCCCC-CCCHHHHHHHHHHhhhhcCCCEEEEEeeccccCccCCCCHHHHHHHHH
Confidence 3555554 33455566677777777899999999998 333123567766665333
No 16
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=52.81 E-value=80 Score=26.93 Aligned_cols=43 Identities=2% Similarity=-0.154 Sum_probs=33.2
Q ss_pred CChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHHH
Q psy10342 228 SPHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFFC 271 (285)
Q Consensus 228 ~~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~~ 271 (285)
++.++..+++++++++| +.|++|-.||. +-. .+..+.+.+.+.
T Consensus 65 ~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~-~~~~~~e~~~~~ 109 (258)
T 4gkb_A 65 QDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGI-GLDAGRDAFVAS 109 (258)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CTTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CccCCHHHHHHH
Confidence 35667788899999999 99999999999 433 467777766543
No 17
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=49.22 E-value=25 Score=27.67 Aligned_cols=57 Identities=18% Similarity=0.156 Sum_probs=35.2
Q ss_pred EEEeeCCCCCChHHHHHHHHHHHhccCCcEEEEcCCc-cccCcc--ccCHHHHH----HHHHHHHh
Q psy10342 219 SVNVRNRDLSPHSSHKRMFRERVHSLLPFVFVVFFSS-GLGKLF--RFSSKTIF----FCANFLAK 277 (285)
Q Consensus 219 ~~Nvpl~~g~~d~~y~~~~~~~l~~~~Pdlivv~aG~-plg~~~--~ls~~g~~----~~~~~l~~ 277 (285)
.+|..... .+-.+.+..+++.+...+||+||+..|. .+. .. ..+.+.|. ++.+.+++
T Consensus 49 v~n~g~~G-~~~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~-~~~~~~~~~~~~~~~~~~i~~~~~ 112 (204)
T 3p94_A 49 FVDRGISG-QTTSEMLVRFRQDVINLKPKAVVILAGINDIA-HNNGVIALENVFGNLVSMAELAKA 112 (204)
T ss_dssp EEEEECTT-CCHHHHHHHHHHHTGGGCEEEEEEECCHHHHT-TTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEcccCc-ccHHHHHHHHHHHHHhCCCCEEEEEeecCccc-cccCCCCHHHHHHHHHHHHHHHHh
Confidence 45666543 3345666677776777899999999999 333 21 14555554 44455544
No 18
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=48.33 E-value=8.9 Score=31.81 Aligned_cols=19 Identities=32% Similarity=0.294 Sum_probs=15.4
Q ss_pred CCcEEEEeccccCCcchhh
Q psy10342 162 HPRVLYIDIDVHHGDGVQD 180 (285)
Q Consensus 162 ~~rv~IvD~DvHhGnGtq~ 180 (285)
++||++||+|...||=+..
T Consensus 34 g~~VlliD~D~~~~~l~~~ 52 (245)
T 3ea0_A 34 DIHVLAVDISLPFGDLDMY 52 (245)
T ss_dssp TCCEEEEECCTTTCCGGGG
T ss_pred CCCEEEEECCCCCCCHHHH
Confidence 7999999999987765543
No 19
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=48.22 E-value=1.1e+02 Score=25.83 Aligned_cols=43 Identities=14% Similarity=0.016 Sum_probs=31.0
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFFC 271 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~~ 271 (285)
+.++..++++.+++++ +.|++|-.||. +.+.-..++.+.+.+.
T Consensus 58 ~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~ 102 (247)
T 3ged_A 58 DPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYI 102 (247)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH
Confidence 4567778888999999 89999999998 3331234666666543
No 20
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=44.06 E-value=19 Score=29.63 Aligned_cols=18 Identities=22% Similarity=0.202 Sum_probs=14.7
Q ss_pred hcCCcEEEEeccccCCcc
Q psy10342 160 KYHPRVLYIDIDVHHGDG 177 (285)
Q Consensus 160 ~~~~rv~IvD~DvHhGnG 177 (285)
++++||++||+|..+||=
T Consensus 29 ~~g~~VlliD~D~~~~~l 46 (237)
T 1g3q_A 29 DRGRKVLAVDGDLTMANL 46 (237)
T ss_dssp HTTCCEEEEECCTTSCCH
T ss_pred hcCCeEEEEeCCCCCCCh
Confidence 346899999999987763
No 21
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=42.80 E-value=1.1e+02 Score=25.95 Aligned_cols=88 Identities=13% Similarity=0.024 Sum_probs=55.1
Q ss_pred HHHHHHHHhcCCcEEEEeccccCCcchhhhhcc-CCCEEEEEeeecCCCCCCCCCCCccccCCCCcccEEEeeCCCCCCh
Q psy10342 152 VIAILELLKYHPRVLYIDIDVHHGDGVQDAFYL-TDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPH 230 (285)
Q Consensus 152 aiAa~~l~~~~~rv~IvD~DvHhGnGtq~~f~~-d~~V~~~SiH~~~~~fyP~~G~~~e~G~g~g~g~~~Nvpl~~g~~d 230 (285)
|+|.+.+ +.+-+|+++|.+.-..+-+.+-... ..++.++. . +=++.
T Consensus 22 aiA~~la-~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~-------------------------------~-Dvt~~ 68 (254)
T 4fn4_A 22 AIAKKFA-LNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK-------------------------------A-DVSKK 68 (254)
T ss_dssp HHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE-------------------------------C-CTTSH
T ss_pred HHHHHHH-HcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE-------------------------------c-cCCCH
Confidence 5555554 4467899999887555555444322 12332221 1 11345
Q ss_pred HHHHHHHHHHHhcc-CCcEEEEcCCc--cccCccccCHHHHHHHH
Q psy10342 231 SSHKRMFRERVHSL-LPFVFVVFFSS--GLGKLFRFSSKTIFFCA 272 (285)
Q Consensus 231 ~~y~~~~~~~l~~~-~Pdlivv~aG~--plg~~~~ls~~g~~~~~ 272 (285)
++..+++++++++| +.|++|=.||. +.+.-..+|.+.+.++.
T Consensus 69 ~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~ 113 (254)
T 4fn4_A 69 KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVL 113 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHH
Confidence 67778889999999 99999999996 44413367877766543
No 22
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=42.49 E-value=20 Score=29.83 Aligned_cols=19 Identities=11% Similarity=0.071 Sum_probs=15.2
Q ss_pred hcCCcEEEEeccccCCcch
Q psy10342 160 KYHPRVLYIDIDVHHGDGV 178 (285)
Q Consensus 160 ~~~~rv~IvD~DvHhGnGt 178 (285)
++++||++||+|..+||=+
T Consensus 29 ~~g~~VlliD~D~~~~~~~ 47 (260)
T 3q9l_A 29 QKGKKTVVIDFAIGLRNLD 47 (260)
T ss_dssp HTTCCEEEEECCCSSCCHH
T ss_pred hCCCcEEEEECCCCCCChh
Confidence 4578999999999877643
No 23
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=41.48 E-value=47 Score=27.10 Aligned_cols=46 Identities=7% Similarity=0.163 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhccCC-cEEEEcCCc-cccCccccCHHHHH----HHHHHHHh
Q psy10342 232 SHKRMFRERVHSLLP-FVFVVFFSS-GLGKLFRFSSKTIF----FCANFLAK 277 (285)
Q Consensus 232 ~y~~~~~~~l~~~~P-dlivv~aG~-plg~~~~ls~~g~~----~~~~~l~~ 277 (285)
..+..+.+.+...+| |+|||..|. .+....+.+.+.|. ++++.+++
T Consensus 87 ~~~~~l~~~l~~~~p~d~VvI~~GtND~~~~~~~~~~~~~~~l~~li~~ir~ 138 (232)
T 3dci_A 87 NGARALEVALSCHMPLDLVIIMLGTNDIKPVHGGRAEAAVSGMRRLAQIVET 138 (232)
T ss_dssp BHHHHHHHHHHHHCSCSEEEEECCTTTTSGGGTSSHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhCCCCCEEEEEeccCCCccccCCCHHHHHHHHHHHHHHHHH
Confidence 345666777888899 999999999 44413334665555 45555554
No 24
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=41.47 E-value=18 Score=32.90 Aligned_cols=16 Identities=31% Similarity=0.443 Sum_probs=13.3
Q ss_pred hcCCcEEEEeccccCCc
Q psy10342 160 KYHPRVLYIDIDVHHGD 176 (285)
Q Consensus 160 ~~~~rv~IvD~DvHhGn 176 (285)
+.++||++||+|. +||
T Consensus 141 ~~g~rVlliD~D~-q~~ 156 (398)
T 3ez2_A 141 MEDLRILVIDLDP-QSS 156 (398)
T ss_dssp GGCCCEEEEEECT-TCH
T ss_pred cCCCeEEEEeCCC-CCC
Confidence 3579999999999 565
No 25
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=41.31 E-value=36 Score=26.85 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=24.2
Q ss_pred EEeeCCCCCChHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 220 VNVRNRDLSPHSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 220 ~Nvpl~~g~~d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
+|.... |.+-.+++..+.+.+...+||+||+..|.
T Consensus 59 ~n~g~~-G~~~~~~~~~~~~~~~~~~pd~vvi~~G~ 93 (216)
T 3rjt_A 59 VNVGTS-GNTVADVARRWEDDVMALQPDYVSLMIGV 93 (216)
T ss_dssp EECCCT-TCCHHHHHHHHHHHTGGGCCSEEEEECCH
T ss_pred EECCCC-CccHHHHHHHHHhHHhhcCCCEEEEEeec
Confidence 344443 23345566667666777899999999999
No 26
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=40.77 E-value=26 Score=29.44 Aligned_cols=23 Identities=9% Similarity=0.111 Sum_probs=16.8
Q ss_pred hcCCcEEEEeccccCCcchhhhhc
Q psy10342 160 KYHPRVLYIDIDVHHGDGVQDAFY 183 (285)
Q Consensus 160 ~~~~rv~IvD~DvHhGnGtq~~f~ 183 (285)
+.++||++||+|. +++.+...+.
T Consensus 27 ~~G~~VlliD~D~-q~~~~~~~~~ 49 (269)
T 1cp2_A 27 AMGKTIMVVGCDP-KADSTRLLLG 49 (269)
T ss_dssp TTTCCEEEEEECT-TSCSSHHHHT
T ss_pred HCCCcEEEEcCCC-CCCHHHHhcC
Confidence 3468999999996 5666665553
No 27
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=40.74 E-value=20 Score=32.28 Aligned_cols=22 Identities=32% Similarity=0.389 Sum_probs=17.6
Q ss_pred hcCCcEEEEeccccCCcchhhhh
Q psy10342 160 KYHPRVLYIDIDVHHGDGVQDAF 182 (285)
Q Consensus 160 ~~~~rv~IvD~DvHhGnGtq~~f 182 (285)
+.++||++||+|.. ||.+...+
T Consensus 28 ~~G~rVLlID~D~q-~~~~~~l~ 49 (361)
T 3pg5_A 28 LQGKRVLYVDCDPQ-CNATQLML 49 (361)
T ss_dssp HTTCCEEEEECCTT-CTTHHHHS
T ss_pred hCCCcEEEEEcCCC-CChhhhhc
Confidence 35799999999977 77777665
No 28
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=40.67 E-value=22 Score=29.75 Aligned_cols=18 Identities=17% Similarity=0.217 Sum_probs=14.7
Q ss_pred hcCCcEEEEeccccCCcc
Q psy10342 160 KYHPRVLYIDIDVHHGDG 177 (285)
Q Consensus 160 ~~~~rv~IvD~DvHhGnG 177 (285)
+.++||++||+|...||=
T Consensus 29 ~~g~~VlliD~D~~~~~l 46 (263)
T 1hyq_A 29 QLGHDVTIVDADITMANL 46 (263)
T ss_dssp HTTCCEEEEECCCSSSSH
T ss_pred hCCCcEEEEECCCCCCCc
Confidence 347899999999987763
No 29
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=37.91 E-value=1e+02 Score=27.41 Aligned_cols=22 Identities=27% Similarity=0.365 Sum_probs=15.7
Q ss_pred cCCcEEEEeccccCCcchhhhhcc
Q psy10342 161 YHPRVLYIDIDVHHGDGVQDAFYL 184 (285)
Q Consensus 161 ~~~rv~IvD~DvHhGnGtq~~f~~ 184 (285)
.++||++||.|-- .+....|..
T Consensus 43 ~g~~vllid~D~~--~~l~~~l~~ 64 (334)
T 3iqw_A 43 VRRSVLLLSTDPA--HNLSDAFSQ 64 (334)
T ss_dssp SSSCEEEEECCSS--CHHHHHHTS
T ss_pred CCCcEEEEECCCC--CChhHHhcc
Confidence 4699999999943 356666643
No 30
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=37.88 E-value=1.7e+02 Score=24.21 Aligned_cols=42 Identities=10% Similarity=-0.016 Sum_probs=28.9
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFF 270 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~ 270 (285)
+.++..++++.+.+.+ ++|+||..||. +.+.-..++.+.+.+
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~ 127 (266)
T 3o38_A 84 STEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDR 127 (266)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHH
Confidence 4456677788888777 88999999998 333123456665543
No 31
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=37.28 E-value=29 Score=29.17 Aligned_cols=26 Identities=4% Similarity=-0.105 Sum_probs=21.1
Q ss_pred ChHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 229 PHSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
+.++|-..+.+.+.+++||+||+ +||
T Consensus 65 ~r~~~d~~~~~~l~~~~~Dliv~-agy 90 (211)
T 3p9x_A 65 SKEAYEIEVVQQLKEKQIDFVVL-AGY 90 (211)
T ss_dssp SHHHHHHHHHHHHHHTTCCEEEE-SSC
T ss_pred chhhhHHHHHHHHHhcCCCEEEE-eCc
Confidence 35678888888899999999887 666
No 32
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=37.23 E-value=1.3e+02 Score=24.44 Aligned_cols=42 Identities=7% Similarity=-0.077 Sum_probs=28.3
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc--cccCccccCHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS--GLGKLFRFSSKTIFF 270 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~--plg~~~~ls~~g~~~ 270 (285)
+.++..++++.+.+.+ ++|++|..||. +.+.-..++.+.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 121 (247)
T 3i1j_A 77 TAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQ 121 (247)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHH
Confidence 4556777778877777 89999999997 333122456665543
No 33
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=36.87 E-value=64 Score=25.53 Aligned_cols=46 Identities=11% Similarity=0.173 Sum_probs=29.3
Q ss_pred HHHHHHHHhccCC-cEEEEcCCc-cccCccccCHHHHH----HHHHHHHhhc
Q psy10342 234 KRMFRERVHSLLP-FVFVVFFSS-GLGKLFRFSSKTIF----FCANFLAKRK 279 (285)
Q Consensus 234 ~~~~~~~l~~~~P-dlivv~aG~-plg~~~~ls~~g~~----~~~~~l~~~~ 279 (285)
+..+...+...+| |+|++..|. .+...++.+.+.|. ++.+.+++.+
T Consensus 71 ~~~l~~~l~~~~p~d~vvi~~G~ND~~~~~~~~~~~~~~~l~~li~~~~~~~ 122 (216)
T 2q0q_A 71 ASYLPSCLATHLPLDLVIIMLGTNDTKAYFRRTPLDIALGMSVLVTQVLTSA 122 (216)
T ss_dssp HHHHHHHHHHHCSCSEEEEECCTGGGSGGGCCCHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHhCCCCCEEEEEecCcccchhcCCCHHHHHHHHHHHHHHHHHhc
Confidence 4445666777788 999999999 44412356766544 4555555443
No 34
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=36.56 E-value=1e+02 Score=25.60 Aligned_cols=42 Identities=10% Similarity=-0.032 Sum_probs=29.1
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFF 270 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~ 270 (285)
+.++..++++.+.+++ ++|++|-.||. +.+.-..++.+.+.+
T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~ 108 (259)
T 4e6p_A 65 RQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEK 108 (259)
T ss_dssp CHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHH
Confidence 3456677888888888 89999999998 333133456665543
No 35
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=35.23 E-value=73 Score=26.51 Aligned_cols=41 Identities=5% Similarity=-0.126 Sum_probs=30.0
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFF 270 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~ 270 (285)
+.++..++++.+.+++ ++|++|-.||. ..+ .+..+.+.+.+
T Consensus 70 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~-~~~~~~~~~~~ 112 (250)
T 3nyw_A 70 DCTKADTEIKDIHQKYGAVDILVNAAAMFMDG-SLSEPVDNFRK 112 (250)
T ss_dssp CHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC-CCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCC-CCCCCHHHHHH
Confidence 3456677788888887 88999999998 445 55666666543
No 36
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=35.01 E-value=23 Score=30.86 Aligned_cols=16 Identities=44% Similarity=0.619 Sum_probs=13.5
Q ss_pred cCCcEEEEeccccCCc
Q psy10342 161 YHPRVLYIDIDVHHGD 176 (285)
Q Consensus 161 ~~~rv~IvD~DvHhGn 176 (285)
.++||++||.|...++
T Consensus 120 ~G~rVLLID~D~~~~~ 135 (286)
T 3la6_A 120 TNKRVLLIDCDMRKGY 135 (286)
T ss_dssp TTCCEEEEECCTTTCC
T ss_pred CCCCEEEEeccCCCCC
Confidence 4699999999998754
No 37
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=34.93 E-value=37 Score=28.96 Aligned_cols=22 Identities=14% Similarity=0.209 Sum_probs=16.2
Q ss_pred cCCcEEEEeccccCCcchhhhhc
Q psy10342 161 YHPRVLYIDIDVHHGDGVQDAFY 183 (285)
Q Consensus 161 ~~~rv~IvD~DvHhGnGtq~~f~ 183 (285)
.++||++||+|.. ++.+...+.
T Consensus 29 ~G~rVlliD~D~q-~~~~~~~~~ 50 (289)
T 2afh_E 29 MGKKVMIVGCDPK-ADSTRLILH 50 (289)
T ss_dssp TTCCEEEEEECSS-SCSSHHHHC
T ss_pred CCCeEEEEecCCC-CCHHHHhcC
Confidence 4789999999974 566655543
No 38
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=34.77 E-value=23 Score=32.21 Aligned_cols=16 Identities=31% Similarity=0.540 Sum_probs=13.3
Q ss_pred hcCCcEEEEeccccCCc
Q psy10342 160 KYHPRVLYIDIDVHHGD 176 (285)
Q Consensus 160 ~~~~rv~IvD~DvHhGn 176 (285)
+.++||++||+|. +||
T Consensus 144 ~~g~rVlliD~D~-~~~ 159 (403)
T 3ez9_A 144 RHDLRILVIDLDP-QAS 159 (403)
T ss_dssp GGCCCEEEEEESS-SSG
T ss_pred cCCCeEEEEeCCC-CCC
Confidence 4579999999999 565
No 39
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=34.40 E-value=34 Score=28.56 Aligned_cols=26 Identities=0% Similarity=-0.124 Sum_probs=20.7
Q ss_pred ChHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 229 PHSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
+.++|-..+.+.+.+++||+||+ +||
T Consensus 66 ~~~~~~~~~~~~l~~~~~Dliv~-a~y 91 (212)
T 3av3_A 66 SKAAFESEILRELKGRQIDWIAL-AGY 91 (212)
T ss_dssp SHHHHHHHHHHHHHHTTCCEEEE-SSC
T ss_pred chhhhHHHHHHHHHhcCCCEEEE-chh
Confidence 45677777778889999998887 676
No 40
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=34.16 E-value=28 Score=29.27 Aligned_cols=17 Identities=35% Similarity=0.669 Sum_probs=13.5
Q ss_pred cCCcEEEEeccccCCcch
Q psy10342 161 YHPRVLYIDIDVHHGDGV 178 (285)
Q Consensus 161 ~~~rv~IvD~DvHhGnGt 178 (285)
.++||++||+|. +||-+
T Consensus 34 ~g~~VlliD~D~-~~~~~ 50 (257)
T 1wcv_1 34 LGKRVLLVDLDP-QGNAT 50 (257)
T ss_dssp TTCCEEEEECCT-TCHHH
T ss_pred CCCCEEEEECCC-CcCHH
Confidence 479999999998 46643
No 41
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=33.74 E-value=29 Score=29.80 Aligned_cols=20 Identities=20% Similarity=0.292 Sum_probs=15.5
Q ss_pred hcCCcEEEEeccccCCcchh
Q psy10342 160 KYHPRVLYIDIDVHHGDGVQ 179 (285)
Q Consensus 160 ~~~~rv~IvD~DvHhGnGtq 179 (285)
+.++||++||+|..+|+=+.
T Consensus 31 ~~G~~VlliD~D~~q~~l~~ 50 (286)
T 2xj4_A 31 YGGAKVAVIDLDLRQRTSAR 50 (286)
T ss_dssp HTTCCEEEEECCTTTCHHHH
T ss_pred HCCCcEEEEECCCCCCCHHH
Confidence 34789999999997766543
No 42
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=33.59 E-value=1.5e+02 Score=24.36 Aligned_cols=44 Identities=7% Similarity=0.006 Sum_probs=30.9
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cc----cCccc-cCHHHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GL----GKLFR-FSSKTIFFCA 272 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-pl----g~~~~-ls~~g~~~~~ 272 (285)
+.++..++++.+.+.+ ++|++|-.||. +. +.-+. ++.+.+.+..
T Consensus 75 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (271)
T 3ek2_A 75 DDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAH 125 (271)
T ss_dssp CHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHH
Confidence 4556777888888887 88999999998 22 31344 7777766543
No 43
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=33.58 E-value=2.2e+02 Score=24.21 Aligned_cols=42 Identities=12% Similarity=-0.053 Sum_probs=29.4
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFF 270 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~ 270 (285)
+.++..++++.+.+++ ++|++|-.||. +.+.-..++.+.+.+
T Consensus 102 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~ 145 (293)
T 3rih_A 102 DPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSE 145 (293)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHH
Confidence 4456677888888888 89999999998 333123566666554
No 44
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=32.96 E-value=35 Score=28.74 Aligned_cols=27 Identities=7% Similarity=-0.016 Sum_probs=21.6
Q ss_pred CChHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 228 SPHSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 228 ~~d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
.+.++|-..+.+.+.+++||+||+ +||
T Consensus 72 ~~r~~~d~~~~~~l~~~~~Dlivl-agy 98 (215)
T 3da8_A 72 PSRDAWDVAITAATAAHEPDLVVS-AGF 98 (215)
T ss_dssp SSHHHHHHHHHHHHHTTCCSEEEE-EEC
T ss_pred cchhhhhHHHHHHHHhhCCCEEEE-cCc
Confidence 345778788888899999999888 565
No 45
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=32.62 E-value=32 Score=28.15 Aligned_cols=15 Identities=13% Similarity=0.040 Sum_probs=12.4
Q ss_pred cCCcEEEEeccccCCc
Q psy10342 161 YHPRVLYIDIDVHHGD 176 (285)
Q Consensus 161 ~~~rv~IvD~DvHhGn 176 (285)
.++||++||+|.. ||
T Consensus 27 ~g~~VlliD~D~~-~~ 41 (254)
T 3kjh_A 27 DYDKIYAVDGDPD-SC 41 (254)
T ss_dssp TCSCEEEEEECTT-SC
T ss_pred CCCeEEEEeCCCC-cC
Confidence 4699999999995 54
No 46
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=32.22 E-value=47 Score=27.02 Aligned_cols=49 Identities=12% Similarity=0.167 Sum_probs=25.1
Q ss_pred hHHHHHHHHH-HHhccCCcEEEEcCCc-cccCccccCHHHHHHHHHHHHhh
Q psy10342 230 HSSHKRMFRE-RVHSLLPFVFVVFFSS-GLGKLFRFSSKTIFFCANFLAKR 278 (285)
Q Consensus 230 d~~y~~~~~~-~l~~~~Pdlivv~aG~-plg~~~~ls~~g~~~~~~~l~~~ 278 (285)
-.+++..++. ++...+||+||+..|. .++....-..+.+.++.+.+++.
T Consensus 77 ~~~~~~~~~~~~l~~~~pd~vvi~~G~ND~~~~~~~~~~~l~~~i~~l~~~ 127 (232)
T 1es9_A 77 TQHVLWRLENGELEHIRPKIVVVWVGTNNHGHTAEQVTGGIKAIVQLVNER 127 (232)
T ss_dssp HHHHHHHHHTTTTTTCCCSEEEEECCTTCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCccccCCCCEEEEEeecCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3344444443 3445688888888887 33301111233455555555553
No 47
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=32.20 E-value=38 Score=28.68 Aligned_cols=26 Identities=8% Similarity=0.075 Sum_probs=20.5
Q ss_pred ChHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 229 PHSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
+.++|-..+.+.+.+++||+||+ +||
T Consensus 85 ~r~~~~~~~~~~l~~~~~Dliv~-agy 110 (229)
T 3auf_A 85 SRTAFDAALAERLQAYGVDLVCL-AGY 110 (229)
T ss_dssp SHHHHHHHHHHHHHHTTCSEEEE-SSC
T ss_pred chhhccHHHHHHHHhcCCCEEEE-cCh
Confidence 35677777778888999998877 677
No 48
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=32.01 E-value=45 Score=27.17 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=12.6
Q ss_pred HHHHHHHH-HHhccCCcEEEEcCCc
Q psy10342 232 SHKRMFRE-RVHSLLPFVFVVFFSS 255 (285)
Q Consensus 232 ~y~~~~~~-~l~~~~Pdlivv~aG~ 255 (285)
+++..++. ++...+||+|||..|.
T Consensus 80 ~~~~~~~~~~l~~~~pd~vvi~~G~ 104 (229)
T 1fxw_F 80 HVLWRLKNGELENIKPKVIVVWVGT 104 (229)
T ss_dssp HHHHHHHTTTTSSCCCSEEEEECCT
T ss_pred HHHHHHHcCccccCCCCEEEEEEec
Confidence 33443433 2334567777776665
No 49
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=31.86 E-value=54 Score=29.25 Aligned_cols=23 Identities=17% Similarity=0.223 Sum_probs=17.5
Q ss_pred cCCcEEEEeccccCCcchhhhhccC
Q psy10342 161 YHPRVLYIDIDVHHGDGVQDAFYLT 185 (285)
Q Consensus 161 ~~~rv~IvD~DvHhGnGtq~~f~~d 185 (285)
.++||++||.|. .+ .....|..+
T Consensus 53 ~G~rVLlvD~D~-~~-~l~~~l~~~ 75 (349)
T 3ug7_A 53 KGLKVVIVSTDP-AH-SLRDIFEQE 75 (349)
T ss_dssp SSCCEEEEECCT-TC-HHHHHHCSC
T ss_pred CCCeEEEEeCCC-CC-CHHHHhCCC
Confidence 479999999999 43 677777543
No 50
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.83 E-value=2.2e+02 Score=23.57 Aligned_cols=41 Identities=7% Similarity=-0.067 Sum_probs=28.5
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIF 269 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~ 269 (285)
+.++..++++.+.+++ ++|++|-.||. +.+.-..++.+.+.
T Consensus 71 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~ 113 (262)
T 3pk0_A 71 DRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLN 113 (262)
T ss_dssp SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH
Confidence 3456677788888888 89999999998 33312345666554
No 51
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=31.30 E-value=2.2e+02 Score=23.38 Aligned_cols=27 Identities=4% Similarity=-0.089 Sum_probs=22.4
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS 255 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~ 255 (285)
+.++..++++.+.+++ ++|++|-.||.
T Consensus 64 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 91 (257)
T 3tpc_A 64 NEADATAALAFAKQEFGHVHGLVNCAGT 91 (257)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 4456777888888888 89999999998
No 52
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=30.78 E-value=2.3e+02 Score=23.46 Aligned_cols=42 Identities=5% Similarity=-0.073 Sum_probs=28.5
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFF 270 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~ 270 (285)
+.++..++++.+.+.+ ++|++|-.||. +.+.-..++.+.+.+
T Consensus 70 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~ 113 (265)
T 3lf2_A 70 DALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSE 113 (265)
T ss_dssp CHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHH
Confidence 3456667788888877 89999999998 333123456665543
No 53
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=30.52 E-value=40 Score=28.22 Aligned_cols=26 Identities=12% Similarity=0.194 Sum_probs=20.9
Q ss_pred ChHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 229 PHSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
+.++|-..+.+.+.+++||+||+ +||
T Consensus 70 ~r~~~d~~~~~~l~~~~~Dliv~-agy 95 (209)
T 4ds3_A 70 SKEAHEDAILAALDVLKPDIICL-AGY 95 (209)
T ss_dssp SHHHHHHHHHHHHHHHCCSEEEE-SSC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEE-ecc
Confidence 35677778888899999999888 566
No 54
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=30.39 E-value=1.5e+02 Score=25.09 Aligned_cols=42 Identities=12% Similarity=-0.072 Sum_probs=29.0
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFF 270 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~ 270 (285)
+.++..++++.+.+++ ++|++|-.||. +.+.-..++.+.+.+
T Consensus 86 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~ 129 (277)
T 3gvc_A 86 DEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDR 129 (277)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHH
Confidence 3455667788888888 89999999998 333133566666554
No 55
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=30.36 E-value=1e+02 Score=24.56 Aligned_cols=59 Identities=3% Similarity=-0.021 Sum_probs=35.5
Q ss_pred EEEeeCCCCCChHHHHHHHHHHHhc-cCCcEEEEcCCc-cccC--ccccCHHHHH----HHHHHHHhh
Q psy10342 219 SVNVRNRDLSPHSSHKRMFRERVHS-LLPFVFVVFFSS-GLGK--LFRFSSKTIF----FCANFLAKR 278 (285)
Q Consensus 219 ~~Nvpl~~g~~d~~y~~~~~~~l~~-~~Pdlivv~aG~-plg~--~~~ls~~g~~----~~~~~l~~~ 278 (285)
.+|..... .+-...+..+++++.. .+||+||+..|. .+.. .-+.+.+.|. ++.+.+++.
T Consensus 46 v~n~g~~G-~~~~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~ 112 (240)
T 3mil_A 46 ILQRGFKG-YTSRWALKILPEILKHESNIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSY 112 (240)
T ss_dssp EEEEECTT-CCHHHHHHHHHHHHHHCCCEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHT
T ss_pred EEecCcCc-ccHHHHHHHHHHHhcccCCCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 34555433 3445667777777766 599999999998 3310 1345555555 455555543
No 56
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=30.14 E-value=46 Score=27.78 Aligned_cols=26 Identities=15% Similarity=0.152 Sum_probs=20.5
Q ss_pred ChHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 229 PHSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
+.++|-..+.+.+.+++||+||+ +||
T Consensus 63 ~r~~~~~~~~~~l~~~~~Dliv~-agy 88 (212)
T 1jkx_A 63 SREAYDRELIHEIDMYAPDVVVL-AGF 88 (212)
T ss_dssp SHHHHHHHHHHHHGGGCCSEEEE-SSC
T ss_pred chhhccHHHHHHHHhcCCCEEEE-eCh
Confidence 34677777778899999998877 576
No 57
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=29.57 E-value=36 Score=28.58 Aligned_cols=19 Identities=26% Similarity=0.340 Sum_probs=14.0
Q ss_pred cCCcEEEEeccccCCcchhh
Q psy10342 161 YHPRVLYIDIDVHHGDGVQD 180 (285)
Q Consensus 161 ~~~rv~IvD~DvHhGnGtq~ 180 (285)
+++||++||+|.. |+-+..
T Consensus 54 ~g~~VlliD~D~~-~~~~~~ 72 (267)
T 3k9g_A 54 KNNKVLLIDMDTQ-ASITSY 72 (267)
T ss_dssp TTSCEEEEEECTT-CHHHHH
T ss_pred CCCCEEEEECCCC-CCHHHH
Confidence 5699999999985 444443
No 58
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=29.30 E-value=51 Score=27.68 Aligned_cols=26 Identities=8% Similarity=0.190 Sum_probs=20.9
Q ss_pred ChHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 229 PHSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
+..+|-..+.+.+.+++||+||+ +||
T Consensus 67 ~r~~~d~~~~~~l~~~~~Dliv~-agy 92 (215)
T 3tqr_A 67 SRTDFESTLQKTIDHYDPKLIVL-AGF 92 (215)
T ss_dssp SHHHHHHHHHHHHHTTCCSEEEE-SSC
T ss_pred chhHhHHHHHHHHHhcCCCEEEE-ccc
Confidence 35677777888899999999887 666
No 59
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=29.20 E-value=39 Score=29.78 Aligned_cols=22 Identities=18% Similarity=0.178 Sum_probs=16.2
Q ss_pred cCCcEEEEeccccCCcchhhhhcc
Q psy10342 161 YHPRVLYIDIDVHHGDGVQDAFYL 184 (285)
Q Consensus 161 ~~~rv~IvD~DvHhGnGtq~~f~~ 184 (285)
.++||++||.|. .+ .....|..
T Consensus 41 ~G~rVLlvD~D~-~~-~l~~~l~~ 62 (324)
T 3zq6_A 41 SGKKTLVISTDP-AH-SLSDSLER 62 (324)
T ss_dssp TTCCEEEEECCS-SC-CHHHHHTS
T ss_pred CCCcEEEEeCCC-Cc-CHHHHhCC
Confidence 479999999999 43 55566643
No 60
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=29.15 E-value=42 Score=27.97 Aligned_cols=26 Identities=0% Similarity=-0.128 Sum_probs=20.4
Q ss_pred ChHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 229 PHSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
+.++|-..+.+.+.+++||+||+ +||
T Consensus 63 ~r~~~~~~~~~~l~~~~~Dliv~-a~y 88 (209)
T 1meo_A 63 NRVEFDSAIDLVLEEFSIDIVCL-AGF 88 (209)
T ss_dssp SHHHHHHHHHHHHHHTTCCEEEE-ESC
T ss_pred chhhhhHHHHHHHHhcCCCEEEE-cch
Confidence 45677777788889999998877 565
No 61
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=28.72 E-value=2e+02 Score=24.46 Aligned_cols=43 Identities=14% Similarity=0.031 Sum_probs=30.2
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cc----cCccccCHHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GL----GKLFRFSSKTIFFC 271 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-pl----g~~~~ls~~g~~~~ 271 (285)
+.++..++++.+.+++ ++|++|-.||. +. +.-..++.+.+.+.
T Consensus 91 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~ 139 (296)
T 3k31_A 91 DAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTS 139 (296)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHH
Confidence 4456677888888887 89999999998 21 31345677766543
No 62
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=28.16 E-value=2.3e+02 Score=23.55 Aligned_cols=42 Identities=7% Similarity=-0.112 Sum_probs=28.3
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFF 270 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~ 270 (285)
+.++..++++.+.+++ ++|++|-.||. ..+.-...+.+.+.+
T Consensus 81 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~ 124 (266)
T 4egf_A 81 EPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDA 124 (266)
T ss_dssp STTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHH
Confidence 3456667788888887 89999999998 222133456665543
No 63
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=27.92 E-value=39 Score=30.38 Aligned_cols=23 Identities=26% Similarity=0.301 Sum_probs=16.3
Q ss_pred hcCCcEEEEeccccCCcchhhhhcc
Q psy10342 160 KYHPRVLYIDIDVHHGDGVQDAFYL 184 (285)
Q Consensus 160 ~~~~rv~IvD~DvHhGnGtq~~f~~ 184 (285)
+.++||++||.|.. +| ....|.-
T Consensus 46 ~~G~rVLLvD~D~~-~~-l~~~lg~ 68 (354)
T 2woj_A 46 QPNKQFLLISTDPA-HN-LSDAFGE 68 (354)
T ss_dssp CTTSCEEEEECCSS-CC-HHHHHTS
T ss_pred cCCCeEEEEECCCC-CC-HHHHhCC
Confidence 44699999999994 43 5555643
No 64
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=27.87 E-value=49 Score=28.47 Aligned_cols=19 Identities=32% Similarity=0.246 Sum_probs=14.4
Q ss_pred hcCCcEEEEeccccCCcchh
Q psy10342 160 KYHPRVLYIDIDVHHGDGVQ 179 (285)
Q Consensus 160 ~~~~rv~IvD~DvHhGnGtq 179 (285)
+.++||++||+|. +||-+.
T Consensus 67 ~~G~~VlliD~D~-~~~~~~ 85 (307)
T 3end_A 67 ILGKRVLQIGCDP-KHDSTF 85 (307)
T ss_dssp HTTCCEEEEEESS-SCCTTH
T ss_pred HCCCeEEEEeCCC-CCCHHH
Confidence 3478999999998 565553
No 65
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=27.82 E-value=2.7e+02 Score=23.33 Aligned_cols=41 Identities=7% Similarity=-0.010 Sum_probs=29.0
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIF 269 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~ 269 (285)
+.++..++++.+.+++ ++|++|-.||. +.+.-..++.+.+.
T Consensus 92 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~ 134 (276)
T 3r1i_A 92 QPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQ 134 (276)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH
Confidence 4456677888888888 89999999998 33313456666654
No 66
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=27.73 E-value=1.9e+02 Score=24.34 Aligned_cols=42 Identities=10% Similarity=-0.070 Sum_probs=28.8
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc--cccCccccCHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS--GLGKLFRFSSKTIFF 270 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~--plg~~~~ls~~g~~~ 270 (285)
+.++..++++.+.+++ ++|++|-.||. +.+.-..++.+.+.+
T Consensus 85 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~ 129 (272)
T 4dyv_A 85 DPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQ 129 (272)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHH
Confidence 3456677788888888 89999999998 323123466665544
No 67
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=27.31 E-value=43 Score=30.11 Aligned_cols=27 Identities=4% Similarity=-0.231 Sum_probs=17.1
Q ss_pred ChHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 229 PHSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
+.+.+..+++.+...-+.|+||+-++.
T Consensus 243 ~~~~~~~ll~~l~~~~~yD~VIID~p~ 269 (373)
T 3fkq_A 243 SYADIDTLIGNIQGMDNYDEIIVDLPF 269 (373)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEEECCC
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 345555555554422378999999875
No 68
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=26.86 E-value=52 Score=27.48 Aligned_cols=25 Identities=4% Similarity=-0.104 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 230 HSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 230 d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
.++|-..+.+.+.+++||+||+ +||
T Consensus 65 r~~~~~~~~~~l~~~~~Dliv~-a~y 89 (216)
T 2ywr_A 65 KKEFEERMALELKKKGVELVVL-AGF 89 (216)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE-SSC
T ss_pred hhhhhHHHHHHHHhcCCCEEEE-eCc
Confidence 4567777777888999998876 677
No 69
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=26.37 E-value=52 Score=28.17 Aligned_cols=16 Identities=19% Similarity=0.179 Sum_probs=13.6
Q ss_pred cCCcEEEEeccccCCc
Q psy10342 161 YHPRVLYIDIDVHHGD 176 (285)
Q Consensus 161 ~~~rv~IvD~DvHhGn 176 (285)
.++||++||.|...++
T Consensus 110 ~G~rVLLID~D~~~~~ 125 (271)
T 3bfv_A 110 AGYKTLIVDGDMRKPT 125 (271)
T ss_dssp TTCCEEEEECCSSSCC
T ss_pred CCCeEEEEeCCCCCcc
Confidence 4799999999998764
No 70
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=26.00 E-value=2.7e+02 Score=22.82 Aligned_cols=42 Identities=5% Similarity=-0.124 Sum_probs=28.2
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFF 270 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~ 270 (285)
+.++..++++.+.+++ ++|++|-.||. +.+.-..++.+.+.+
T Consensus 66 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~ 109 (257)
T 3imf_A 66 NTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNS 109 (257)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHH
Confidence 4456677788888887 89999999997 222123455555443
No 71
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=25.25 E-value=55 Score=28.50 Aligned_cols=17 Identities=35% Similarity=0.653 Sum_probs=14.2
Q ss_pred cCCcEEEEeccccCCcc
Q psy10342 161 YHPRVLYIDIDVHHGDG 177 (285)
Q Consensus 161 ~~~rv~IvD~DvHhGnG 177 (285)
.++||++||.|...++=
T Consensus 132 ~G~rVLLID~D~r~~~l 148 (299)
T 3cio_A 132 SDQKVLFIDADLRRGYS 148 (299)
T ss_dssp TTCCEEEEECCTTTCCH
T ss_pred CCCcEEEEECCCCCccH
Confidence 47999999999987653
No 72
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=25.12 E-value=44 Score=26.55 Aligned_cols=56 Identities=7% Similarity=-0.031 Sum_probs=30.8
Q ss_pred EeeCCCCCChHHHHHHHHHHHhccCCcEEEEcCCc-cccCccccCHH----HHHHHHHHHHhhc
Q psy10342 221 NVRNRDLSPHSSHKRMFRERVHSLLPFVFVVFFSS-GLGKLFRFSSK----TIFFCANFLAKRK 279 (285)
Q Consensus 221 Nvpl~~g~~d~~y~~~~~~~l~~~~Pdlivv~aG~-plg~~~~ls~~----g~~~~~~~l~~~~ 279 (285)
|..... .+-.+.+..+++.+...+||+||++.|. .+. . +.+.+ .+.++.+.+++.+
T Consensus 62 n~g~~G-~~~~~~~~~l~~~~~~~~pd~vvi~~G~ND~~-~-~~~~~~~~~~l~~~i~~l~~~~ 122 (214)
T 2hsj_A 62 NRGIRG-YQTGLLLENLDAHLYGGAVDKIFLLIGTNDIG-K-DVPVNEALNNLEAIIQSVARDY 122 (214)
T ss_dssp EEECTT-CCHHHHHHTGGGGCCCSCCCEEEEECCHHHHH-T-TCCHHHHHHHHHHHHHHHHHHC
T ss_pred ecCccc-hhHHHHHHHhhHHHHhcCCCEEEEEEecCcCC-c-CCCHHHHHHHHHHHHHHHHHhC
Confidence 444432 2333444444443445699999999998 443 1 34444 4555566665543
No 73
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=24.72 E-value=53 Score=27.58 Aligned_cols=17 Identities=18% Similarity=0.141 Sum_probs=13.6
Q ss_pred hcCCcEEEEeccccCCc
Q psy10342 160 KYHPRVLYIDIDVHHGD 176 (285)
Q Consensus 160 ~~~~rv~IvD~DvHhGn 176 (285)
+.++||++||+|...++
T Consensus 45 ~~G~~VlliD~D~~~~~ 61 (262)
T 2ph1_A 45 RQGKKVGILDADFLGPS 61 (262)
T ss_dssp HTTCCEEEEECCSSCCH
T ss_pred HCCCeEEEEeCCCCCCC
Confidence 34689999999997654
No 74
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=24.01 E-value=83 Score=25.26 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=21.6
Q ss_pred EEEeeCCCCCChHHHHHHHHHHHhccCCcEEEEc
Q psy10342 219 SVNVRNRDLSPHSSHKRMFRERVHSLLPFVFVVF 252 (285)
Q Consensus 219 ~~Nvpl~~g~~d~~y~~~~~~~l~~~~Pdlivv~ 252 (285)
++||--..+.+..+=+..+.+.|.+.+||+|.+|
T Consensus 18 s~Ni~g~~~~~~~~r~~~i~~~i~~~~pDIi~LQ 51 (256)
T 4fva_A 18 SWNIDGLDGRSLLTRMKAVAHIVKNVNPDILFLQ 51 (256)
T ss_dssp EEECCTTCCTTHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred EEecCCCCCcCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 4566211222334445567778888899999998
No 75
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=23.80 E-value=3.1e+02 Score=22.66 Aligned_cols=71 Identities=4% Similarity=-0.092 Sum_probs=45.7
Q ss_pred HHHHHHHHhcCCcEEEEeccccCCcchhhhhccC--CCEEEEEeeecCCCCCCCCCCCccccCCCCcccEEEeeCCCCCC
Q psy10342 152 VIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLT--DRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSP 229 (285)
Q Consensus 152 aiAa~~l~~~~~rv~IvD~DvHhGnGtq~~f~~d--~~V~~~SiH~~~~~fyP~~G~~~e~G~g~g~g~~~Nvpl~~g~~ 229 (285)
|+|-+.+ +.+-+|++.|.+-...+-+++...+- +++.++ +. +=++
T Consensus 23 aiA~~la-~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~-Dv~~ 69 (256)
T 4fs3_A 23 GVAKVLD-QLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY-------------------------------QI-DVQS 69 (256)
T ss_dssp HHHHHHH-HTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEE-------------------------------EC-CTTC
T ss_pred HHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEE-------------------------------Ec-cCCC
Confidence 5554444 44679999998765555555544321 122211 11 1135
Q ss_pred hHHHHHHHHHHHhcc-CCcEEEEcCCc
Q psy10342 230 HSSHKRMFRERVHSL-LPFVFVVFFSS 255 (285)
Q Consensus 230 d~~y~~~~~~~l~~~-~Pdlivv~aG~ 255 (285)
.++..++++.+.+++ +.|.+|-.+|.
T Consensus 70 ~~~v~~~~~~~~~~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 70 DEEVINGFEQIGKDVGNIDGVYHSIAF 96 (256)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecccc
Confidence 677788899999998 89999999998
No 76
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=23.76 E-value=86 Score=24.60 Aligned_cols=22 Identities=14% Similarity=0.073 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHhccCCcEEEEc
Q psy10342 231 SSHKRMFRERVHSLLPFVFVVF 252 (285)
Q Consensus 231 ~~y~~~~~~~l~~~~Pdlivv~ 252 (285)
.+=+..+.+.|.+.+||+|.+|
T Consensus 20 ~~r~~~i~~~i~~~~pDIi~LQ 41 (250)
T 4f1h_A 20 ADRARGLCSYLALYTPDVVFLQ 41 (250)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEE
Confidence 3445667778888899999997
No 77
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=23.61 E-value=1.4e+02 Score=24.69 Aligned_cols=42 Identities=10% Similarity=0.118 Sum_probs=31.1
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFFC 271 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~~ 271 (285)
+.++..++++.+.+++ ++|++|-.||. ..+ .+..+.+.+.+.
T Consensus 72 d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~ 115 (256)
T 3gaf_A 72 DEQHREAVIKAALDQFGKITVLVNNAGGGGPK-PFDMPMSDFEWA 115 (256)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CTTCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC-CCCCCHHHHHHH
Confidence 4456677788888888 89999999998 444 456777776543
No 78
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=23.48 E-value=1.2e+02 Score=24.09 Aligned_cols=56 Identities=16% Similarity=0.016 Sum_probs=32.1
Q ss_pred EEeeCCCCCChHHHHHHHHH-HHhc---cCCcEEEEcCCc-cccCc----cccCHHHHH----HHHHHHHh
Q psy10342 220 VNVRNRDLSPHSSHKRMFRE-RVHS---LLPFVFVVFFSS-GLGKL----FRFSSKTIF----FCANFLAK 277 (285)
Q Consensus 220 ~Nvpl~~g~~d~~y~~~~~~-~l~~---~~Pdlivv~aG~-plg~~----~~ls~~g~~----~~~~~l~~ 277 (285)
+|..... .+-.+.+..++. ++.. .+||+||++.|. .+. . .+.+.+.|. ++.+.+++
T Consensus 60 ~n~g~~G-~t~~~~~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~-~~~~~~~~~~~~~~~~l~~li~~l~~ 128 (218)
T 1vjg_A 60 YNLGIRR-DTSSDIAKRWLQEVSLRLHKEYNSLVVFSFGLNDTT-LENGKPRVSIAETIKNTREILTQAKK 128 (218)
T ss_dssp EEEECTT-CCHHHHHHHHHHHHHTTCCTTSEEEEEEECCHHHHC-EETTEESSCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCC-cCHHHHHHHhHHhhhhhhccCCCCEEEEEecCCcch-hhcccccCCHHHHHHHHHHHHHHHHH
Confidence 4555543 334455555554 5654 499999999998 333 1 145655554 44444444
No 79
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=22.53 E-value=3.3e+02 Score=22.58 Aligned_cols=41 Identities=10% Similarity=-0.018 Sum_probs=27.6
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc--cccCccccCHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS--GLGKLFRFSSKTIF 269 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~--plg~~~~ls~~g~~ 269 (285)
+.++..++++.+.+.+ ++|++|-.||. +.+.-..++.+.+.
T Consensus 74 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~ 117 (281)
T 3svt_A 74 NEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWR 117 (281)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHH
Confidence 4456677888888877 89999999996 33312345555544
No 80
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=22.19 E-value=3.4e+02 Score=22.50 Aligned_cols=42 Identities=2% Similarity=-0.207 Sum_probs=28.3
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc--c-ccCccccCHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS--G-LGKLFRFSSKTIFF 270 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~--p-lg~~~~ls~~g~~~ 270 (285)
+.++..++++.+.+.+ ++|++|-.||. + ...-..++.+.+.+
T Consensus 68 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 113 (271)
T 3tzq_B 68 NEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDD 113 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHH
Confidence 4566777888888888 89999999997 2 11012456655543
No 81
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*
Probab=21.35 E-value=1e+02 Score=24.65 Aligned_cols=22 Identities=14% Similarity=0.012 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHhccCCcEEEEc
Q psy10342 231 SSHKRMFRERVHSLLPFVFVVF 252 (285)
Q Consensus 231 ~~y~~~~~~~l~~~~Pdlivv~ 252 (285)
.+=+..+.+.|.+.+||+|.+|
T Consensus 26 ~~r~~~i~~~i~~~~pDIi~LQ 47 (256)
T 4gz1_A 26 PERARGVCSCLALYSPDVVFLQ 47 (256)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEE
Confidence 3334566677888899999987
No 82
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=21.33 E-value=1.9e+02 Score=25.80 Aligned_cols=58 Identities=7% Similarity=0.001 Sum_probs=35.4
Q ss_pred EEEeeCCCCCChHHHHH--HHHHHHhccCC-cEEEEcCCc-cccCccccCHHHH----HHHHHHHHh
Q psy10342 219 SVNVRNRDLSPHSSHKR--MFRERVHSLLP-FVFVVFFSS-GLGKLFRFSSKTI----FFCANFLAK 277 (285)
Q Consensus 219 ~~Nvpl~~g~~d~~y~~--~~~~~l~~~~P-dlivv~aG~-plg~~~~ls~~g~----~~~~~~l~~ 277 (285)
.+|.-..- .+-..++. .+.+++.+++| |+|||+.|. .+..+...+.+.| .++.+.+++
T Consensus 202 v~N~GisG-~tt~~~l~~~rl~~~l~~~~p~d~VvI~~G~ND~~~~~~~~~~~~~~~l~~ii~~lr~ 267 (375)
T 2o14_A 202 VRNMASGG-QIARGFRNDGQLEAILKYIKPGDYFMLQLGINDTNPKHKESEAEFKEVMRDMIRQVKA 267 (375)
T ss_dssp EEECCCTT-CCHHHHHHSSHHHHHHTTCCTTCEEEEECCTGGGCGGGCCCHHHHHHHHHHHHHHHHT
T ss_pred EEEeccCC-CcHhhhhhcccHHHHHHhCCCCCEEEEEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Confidence 56666543 33445553 56777888899 999999999 4431222455554 445555554
No 83
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=21.32 E-value=1.1e+02 Score=26.82 Aligned_cols=26 Identities=4% Similarity=-0.023 Sum_probs=21.0
Q ss_pred ChHHHHHHHHHHHhccCCcEEEEcCCc
Q psy10342 229 PHSSHKRMFRERVHSLLPFVFVVFFSS 255 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~~Pdlivv~aG~ 255 (285)
+..+|...+.+.+.+++||+||+ +||
T Consensus 150 ~r~~~~~~~~~~l~~~~~Dlivl-agy 175 (288)
T 3obi_A 150 TRRQQEAAITALIAQTHTDLVVL-ARY 175 (288)
T ss_dssp THHHHHHHHHHHHHHHTCCEEEE-SSC
T ss_pred cHHHHHHHHHHHHHhcCCCEEEh-hhh
Confidence 35677777888899999999887 677
No 84
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=20.59 E-value=2.2e+02 Score=24.10 Aligned_cols=43 Identities=2% Similarity=-0.192 Sum_probs=31.5
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFFC 271 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~~ 271 (285)
+.++..++++.+.+++ +.|++|-.||. +.+.-..++.+.+.++
T Consensus 69 ~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~ 113 (255)
T 4g81_D 69 DELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKV 113 (255)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHH
Confidence 4556778888999999 89999999999 3331345777766543
No 85
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=20.36 E-value=73 Score=25.10 Aligned_cols=13 Identities=15% Similarity=0.194 Sum_probs=10.8
Q ss_pred hcCCcEEEEeccc
Q psy10342 160 KYHPRVLYIDIDV 172 (285)
Q Consensus 160 ~~~~rv~IvD~Dv 172 (285)
+.++||++||+|.
T Consensus 28 ~~g~~vlliD~D~ 40 (206)
T 4dzz_A 28 RSGYNIAVVDTDP 40 (206)
T ss_dssp HTTCCEEEEECCT
T ss_pred HCCCeEEEEECCC
Confidence 3578999999993
No 86
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=20.17 E-value=1.5e+02 Score=25.57 Aligned_cols=45 Identities=9% Similarity=-0.065 Sum_probs=33.1
Q ss_pred ChHHHHHHHHHHHhcc-CCcEEEEcCCc-cccCccccCHHHHHHHHH
Q psy10342 229 PHSSHKRMFRERVHSL-LPFVFVVFFSS-GLGKLFRFSSKTIFFCAN 273 (285)
Q Consensus 229 ~d~~y~~~~~~~l~~~-~Pdlivv~aG~-plg~~~~ls~~g~~~~~~ 273 (285)
+.++..++++.+.+++ +.|++|-.||. +.+.-..+|.+.+.+..+
T Consensus 86 ~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~ 132 (273)
T 4fgs_A 86 NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFD 132 (273)
T ss_dssp CHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHH
Confidence 4566778888999999 89999999999 333234578777765443
Done!