Your job contains 1 sequence.
>psy10342
MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC
RFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLN
NNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQD
AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRER
VHSLLPFVFVVFFSSGLGKLFRFSSKTIFFCANFLAKRKSSSVIP
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10342
(285 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P56520 - symbol:HDAC3 "Histone deacetylase 3" s... 955 4.7e-96 1
UNIPROTKB|F1NH59 - symbol:HDAC3 "Histone deacetylase" spe... 953 7.6e-96 1
UNIPROTKB|E2R792 - symbol:HDAC3 "Histone deacetylase" spe... 951 1.2e-95 1
UNIPROTKB|O15379 - symbol:HDAC3 "Histone deacetylase 3" s... 951 1.2e-95 1
UNIPROTKB|F2Z4Z6 - symbol:HDAC3 "Histone deacetylase" spe... 951 1.2e-95 1
MGI|MGI:1343091 - symbol:Hdac3 "histone deacetylase 3" sp... 949 2.0e-95 1
RGD|619977 - symbol:Hdac3 "histone deacetylase 3" species... 949 2.0e-95 1
UNIPROTKB|Q6P6W3 - symbol:Hdac3 "Histone deacetylase 3" s... 949 2.0e-95 1
ZFIN|ZDB-GENE-040426-847 - symbol:hdac3 "histone deacetyl... 947 3.3e-95 1
FB|FBgn0025825 - symbol:Hdac3 "Histone deacetylase 3" spe... 929 2.7e-93 1
DICTYBASE|DDB_G0270338 - symbol:hdaB "type-1 histone deac... 820 9.4e-82 1
UNIPROTKB|P56518 - symbol:HDAC1 "Histone deacetylase 1" s... 810 1.1e-80 1
UNIPROTKB|D4AEB0 - symbol:Hdac3 "Histone deacetylase" spe... 810 1.1e-80 1
ZFIN|ZDB-GENE-020419-32 - symbol:hdac1 "histone deacetyla... 802 7.6e-80 1
UNIPROTKB|F1NM39 - symbol:HDAC2 "Histone deacetylase" spe... 800 1.2e-79 1
UNIPROTKB|J3KPW7 - symbol:HDAC2 "Histone deacetylase 2" s... 800 1.2e-79 1
UNIPROTKB|Q92769 - symbol:HDAC2 "Histone deacetylase 2" s... 800 1.2e-79 1
UNIPROTKB|F1RZK8 - symbol:HDAC2 "Histone deacetylase" spe... 800 1.2e-79 1
MGI|MGI:1097691 - symbol:Hdac2 "histone deacetylase 2" sp... 800 1.2e-79 1
UNIPROTKB|F1MFZ7 - symbol:HDAC2 "Histone deacetylase" spe... 799 1.6e-79 1
UNIPROTKB|Q32PJ8 - symbol:HDAC1 "Histone deacetylase 1" s... 792 8.7e-79 1
UNIPROTKB|E2R692 - symbol:HDAC1 "Uncharacterized protein"... 792 8.7e-79 1
UNIPROTKB|F6X8F5 - symbol:HDAC1 "Histone deacetylase" spe... 792 8.7e-79 1
UNIPROTKB|J9NUI0 - symbol:HDAC1 "Histone deacetylase" spe... 792 8.7e-79 1
UNIPROTKB|Q13547 - symbol:HDAC1 "Histone deacetylase 1" s... 792 8.7e-79 1
MGI|MGI:108086 - symbol:Hdac1 "histone deacetylase 1" spe... 792 8.7e-79 1
RGD|619975 - symbol:Hdac1l "histone deacetylase 1-like" s... 792 8.7e-79 1
FB|FBgn0015805 - symbol:Rpd3 "Rpd3" species:7227 "Drosoph... 791 1.1e-78 1
DICTYBASE|DDB_G0268024 - symbol:hdaA "type-1 histone deac... 788 2.3e-78 1
UNIPROTKB|P56517 - symbol:HDAC1 "Histone deacetylase 1" s... 788 2.3e-78 1
CGD|CAL0005608 - symbol:RPD31 species:5476 "Candida albic... 785 4.8e-78 1
UNIPROTKB|Q5ADP0 - symbol:RPD31 "Potential Sin3.Rpd3 hist... 785 4.8e-78 1
TAIR|locus:2098115 - symbol:HDA9 "histone deacetylase 9" ... 783 7.9e-78 1
UNIPROTKB|F1PR63 - symbol:HDAC2 "Histone deacetylase" spe... 780 1.6e-77 1
SGD|S000005274 - symbol:RPD3 "Histone deacetylase" specie... 777 3.4e-77 1
WB|WBGene00001834 - symbol:hda-1 species:6239 "Caenorhabd... 762 1.3e-75 1
UNIPROTKB|O17695 - symbol:hda-1 "Histone deacetylase 1" s... 762 1.3e-75 1
ASPGD|ASPL0000073195 - symbol:rpdA species:162425 "Emeric... 760 2.1e-75 1
UNIPROTKB|I3LG31 - symbol:LOC100622482 "Histone deacetyla... 760 2.1e-75 1
UNIPROTKB|P56519 - symbol:HDAC2 "Histone deacetylase 2" s... 757 4.5e-75 1
WB|WBGene00001836 - symbol:hda-3 species:6239 "Caenorhabd... 753 1.2e-74 1
TAIR|locus:2120948 - symbol:HD1 "AT4G38130" species:3702 ... 750 2.5e-74 1
TAIR|locus:2162017 - symbol:HDA6 "histone deacetylase 6" ... 736 7.5e-73 1
CGD|CAL0004384 - symbol:HOS2 species:5476 "Candida albica... 731 2.5e-72 1
UNIPROTKB|Q5A839 - symbol:HOS2 "Histone deacetylase" spec... 731 2.5e-72 1
UNIPROTKB|J9P9H5 - symbol:HDAC2 "Histone deacetylase" spe... 726 8.6e-72 1
UNIPROTKB|B3KRS5 - symbol:HDAC2 "Histone deacetylase" spe... 726 8.6e-72 1
POMBASE|SPAC3G9.07c - symbol:hos2 "histone deacetylase (c... 719 4.8e-71 1
POMBASE|SPBC36.05c - symbol:clr6 "histone deacetylase (cl... 714 1.6e-70 1
SGD|S000003162 - symbol:HOS2 "Histone deacetylase and sub... 714 1.6e-70 1
CGD|CAL0005111 - symbol:RPD3 species:5476 "Candida albica... 713 2.1e-70 1
UNIPROTKB|Q5A209 - symbol:RPD3 "Histone deacetylase" spec... 713 2.1e-70 1
UNIPROTKB|Q5TEE2 - symbol:HDAC1 "Histone deacetylase 1" s... 446 4.2e-67 2
UNIPROTKB|E7ESJ6 - symbol:HDAC3 "Histone deacetylase 3" s... 501 1.8e-66 2
UNIPROTKB|F1M4V8 - symbol:F1M4V8 "Histone deacetylase" sp... 675 2.2e-66 1
WB|WBGene00001835 - symbol:hda-2 species:6239 "Caenorhabd... 674 2.8e-66 1
ASPGD|ASPL0000013866 - symbol:hosA species:162425 "Emeric... 644 4.2e-63 1
TAIR|locus:2157111 - symbol:HDA7 "histone deacetylase7" s... 557 7.0e-54 1
UNIPROTKB|H3BM24 - symbol:HDAC2 "Histone deacetylase 2" s... 545 1.3e-52 1
UNIPROTKB|G3MYR9 - symbol:HDAC8 "Histone deacetylase" spe... 530 5.1e-51 1
UNIPROTKB|Q0VCB2 - symbol:HDAC8 "Histone deacetylase 8" s... 530 5.1e-51 1
UNIPROTKB|I3L5X0 - symbol:HDAC8 "Uncharacterized protein"... 527 1.1e-50 1
UNIPROTKB|E2RQK6 - symbol:HDAC8 "Histone deacetylase" spe... 526 1.3e-50 1
UNIPROTKB|J9P5B2 - symbol:HDAC8 "Histone deacetylase" spe... 526 1.3e-50 1
UNIPROTKB|A6NMT1 - symbol:HDAC8 "Histone deacetylase 8" s... 526 1.3e-50 1
UNIPROTKB|Q9BY41 - symbol:HDAC8 "Histone deacetylase 8" s... 526 1.3e-50 1
MGI|MGI:1917565 - symbol:Hdac8 "histone deacetylase 8" sp... 524 2.2e-50 1
RGD|1562895 - symbol:Hdac8 "histone deacetylase 8" specie... 524 2.2e-50 1
UNIPROTKB|F1SV89 - symbol:LOC100521667 "Histone deacetyla... 523 2.8e-50 1
UNIPROTKB|E7ENE4 - symbol:HDAC8 "Histone deacetylase 8" s... 519 7.4e-50 1
ZFIN|ZDB-GENE-040426-2772 - symbol:hdac8 "histone deacety... 521 9.1e-49 1
UNIPROTKB|F1NFY6 - symbol:HDAC8 "Histone deacetylase" spe... 502 4.7e-48 1
UNIPROTKB|E7EVA8 - symbol:HDAC8 "Histone deacetylase 8" s... 382 2.2e-40 2
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa... 398 4.9e-37 1
TIGR_CMR|GSU_1222 - symbol:GSU_1222 "histone deacetylase/... 398 4.9e-37 1
UNIPROTKB|E7EW22 - symbol:HDAC8 "Histone deacetylase 8" s... 372 2.8e-34 1
UNIPROTKB|A6NGJ7 - symbol:HDAC8 "Histone deacetylase 8" s... 297 4.8e-31 2
SGD|S000006272 - symbol:HOS1 "Class I histone deacetylase... 282 4.5e-29 2
UNIPROTKB|Q3AFN8 - symbol:acuC "Acetoin utilization prote... 315 3.1e-28 1
TIGR_CMR|CHY_0174 - symbol:CHY_0174 "acetoin utilization ... 315 3.1e-28 1
UNIPROTKB|Q81KS2 - symbol:acuC "Acetoin utilization prote... 309 1.3e-27 1
TIGR_CMR|BA_4918 - symbol:BA_4918 "acetoin utilization pr... 309 1.3e-27 1
UNIPROTKB|E5RG37 - symbol:HDAC2 "Histone deacetylase 2" s... 300 1.2e-26 1
UNIPROTKB|C9J8F0 - symbol:HDAC8 "Histone deacetylase 8" s... 297 2.5e-26 1
UNIPROTKB|E5RH52 - symbol:HDAC2 "Histone deacetylase 2" s... 293 6.6e-26 1
UNIPROTKB|E7EWI8 - symbol:HDAC3 "Histone deacetylase 3" s... 285 4.6e-25 1
UNIPROTKB|E5RFP9 - symbol:HDAC2 "Histone deacetylase 2" s... 269 2.3e-23 1
UNIPROTKB|E5RHE7 - symbol:HDAC2 "Histone deacetylase 2" s... 265 6.1e-23 1
CGD|CAL0001747 - symbol:HOS1 species:5476 "Candida albica... 250 6.5e-23 2
UNIPROTKB|Q59Q78 - symbol:HOS1 "Likely histone deacetylas... 250 6.5e-23 2
UNIPROTKB|A6NGT0 - symbol:HDAC8 "Histone deacetylase 8" s... 243 1.3e-20 1
UNIPROTKB|A6ND12 - symbol:HDAC8 "Histone deacetylase 8" s... 240 2.7e-20 1
UNIPROTKB|A6NJR3 - symbol:HDAC8 "Histone deacetylase 8" s... 240 2.7e-20 1
RGD|1310748 - symbol:Hdac9 "histone deacetylase 9" specie... 195 9.9e-18 2
UNIPROTKB|F1S1J4 - symbol:HDAC5 "Uncharacterized protein"... 194 3.4e-17 2
UNIPROTKB|E5RGV4 - symbol:HDAC2 "Histone deacetylase 2" s... 209 5.3e-17 1
UNIPROTKB|E1C7C0 - symbol:HDAC9 "Uncharacterized protein"... 197 9.6e-17 2
UNIPROTKB|F1LSN5 - symbol:F1LSN5 "Uncharacterized protein... 200 1.0e-16 2
UNIPROTKB|Q80ZH1 - symbol:HDAC5 "Histone deacetylase 5" s... 195 1.1e-16 2
TAIR|locus:2201826 - symbol:HDA08 "AT1G08460" species:370... 209 1.5e-16 1
WARNING: Descriptions of 115 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
Identities = 170/242 (70%), Positives = 203/242 (83%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP+ + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY++NV RD S+K +F+ ++
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 244 LL 245
++
Sbjct: 243 VV 244
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
Identities = 170/242 (70%), Positives = 202/242 (83%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP+ + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+ ++
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 244 LL 245
++
Sbjct: 243 VV 244
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 170/242 (70%), Positives = 201/242 (83%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+ ++
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 244 LL 245
++
Sbjct: 243 VV 244
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 170/242 (70%), Positives = 201/242 (83%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+ ++
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 244 LL 245
++
Sbjct: 243 VV 244
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 170/242 (70%), Positives = 201/242 (83%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+ ++
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQ 242
Query: 244 LL 245
++
Sbjct: 243 VV 244
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 170/235 (72%), Positives = 197/235 (83%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQ 237
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 170/235 (72%), Positives = 197/235 (83%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQ 237
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 170/235 (72%), Positives = 197/235 (83%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S +YIDFL VSP + TK L F G+DCP+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 SEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQ 237
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 170/238 (71%), Positives = 201/238 (84%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
M+N+T +YFY+PDVGNFHYGA HPMKPHRLS+ +SL+L YGL+KKM +++PYKAS HDMC
Sbjct: 1 MTNRT-AYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMC 59
Query: 61 RFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLN 120
RFHS +YIDFL VSP+ + TK L F G DCP+F GL++FCS YTGASL+GA QLN
Sbjct: 60 RFHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGGDCPVFPGLFEFCSRYTGASLQGATQLN 119
Query: 121 NNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQD 180
+ CDIAINW+GGLHHAKK EASGFCYVNDIVI+ILELLKYHPRVLYIDID+HHGDGVQ+
Sbjct: 120 HKICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQE 179
Query: 181 AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
AFYLTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S++++F+
Sbjct: 180 AFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQ 237
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 172/249 (69%), Positives = 202/249 (81%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
M+++ VSYFYN DVGNFHYGA HPMKP RL+V +SL++ YGLHKKM+IYRPYKAS DM
Sbjct: 1 MTDRRVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDML 60
Query: 61 RFHSAEYIDFLHTVSPDKIH----EHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGA 116
RFHS EYI +L V+P I +TK+L F+ GEDCP+F GL+DFC+MYTGASLEGA
Sbjct: 61 RFHSDEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGA 120
Query: 117 IQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGD 176
+LN+N DI INWSGGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDIDVHHGD
Sbjct: 121 QKLNHNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGD 180
Query: 177 GVQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRM 236
GVQ+AFYLTDRVMT SFHKYG FFP +GDMYEIGAE GRYYSVNV ++ S+ ++
Sbjct: 181 GVQEAFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQV 240
Query: 237 FRERVHSLL 245
F+ + +++
Sbjct: 241 FKPIISAIM 249
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 150/245 (61%), Positives = 192/245 (78%)
Query: 2 SNKT-VSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
++KT V YF++ DVGN+ YG HPMKPHRL + N+L+L YGLHKKM +Y+ A DM
Sbjct: 10 TSKTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDML 69
Query: 61 RFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLN 120
+FHS +Y+DFL V+P+ I+E K + +F GEDCP+F GLYD+CS+Y+G S+EGA++LN
Sbjct: 70 KFHSEDYVDFLERVTPENINEW-KDVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLN 128
Query: 121 NNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQD 180
+ DIAINWSGGLHHA+K EASGFCYVNDIV+AILELLK+H RVLYIDIDVHHGDGVQ+
Sbjct: 129 HRMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQE 188
Query: 181 AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRER 240
AFYLTDRVMTVSFHK+GG FFP +GD+ EIGA+ G+ YSVNV D ++ +F+
Sbjct: 189 AFYLTDRVMTVSFHKFGGDFFPGTGDIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPV 248
Query: 241 VHSLL 245
+ ++
Sbjct: 249 IQGVM 253
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 143/237 (60%), Positives = 188/237 (79%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ K V Y+Y+ DVGN++YG HPMKPHR+ + ++LIL YGL++KM+IYRP+KA +M +
Sbjct: 6 TKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMTK 65
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +Y+ FL T+ PD + E+TK + +F GEDCP+F GLY+FC + +G S+ GA++LN
Sbjct: 66 YHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNK 125
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIAINW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 126 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 185
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S+ ++F+
Sbjct: 186 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFK 241
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 150/235 (63%), Positives = 176/235 (74%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM + P + +C H
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVKTPSRNKQEKLCPVH 62
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
I F P + + G + P+F GL++FCS YTGASL+GA QLNN
Sbjct: 63 GVPLIWFSTRFGPKSLLNGSVSGSGVEEGREFPVFPGLFEFCSRYTGASLQGATQLNNKI 122
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQ 237
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 141/237 (59%), Positives = 189/237 (79%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ K V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 8 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 67
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 68 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNK 127
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIAINW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 243
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 139/242 (57%), Positives = 191/242 (78%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++H
Sbjct: 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 69
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EYI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 70 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ 129
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
D+A+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY
Sbjct: 130 TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 189
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S+ ++F+ +
Sbjct: 190 TTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISK 248
Query: 244 LL 245
++
Sbjct: 249 VM 250
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 139/242 (57%), Positives = 191/242 (78%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++H
Sbjct: 104 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 163
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EYI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 164 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ 223
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
D+A+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY
Sbjct: 224 TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 283
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S+ ++F+ +
Sbjct: 284 TTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISK 342
Query: 244 LL 245
++
Sbjct: 343 VM 344
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 139/242 (57%), Positives = 191/242 (78%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++H
Sbjct: 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 69
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EYI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 70 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ 129
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
D+A+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY
Sbjct: 130 TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 189
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S+ ++F+ +
Sbjct: 190 TTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISK 248
Query: 244 LL 245
++
Sbjct: 249 VM 250
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 139/242 (57%), Positives = 191/242 (78%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++H
Sbjct: 72 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 131
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EYI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 132 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ 191
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
D+A+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY
Sbjct: 192 TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 251
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S+ ++F+ +
Sbjct: 252 TTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISK 310
Query: 244 LL 245
++
Sbjct: 311 VM 312
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 139/242 (57%), Positives = 191/242 (78%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++H
Sbjct: 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 69
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EYI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 70 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ 129
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
D+A+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY
Sbjct: 130 TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 189
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S+ ++F+ +
Sbjct: 190 TTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISK 248
Query: 244 LL 245
++
Sbjct: 249 VM 250
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 139/235 (59%), Positives = 188/235 (80%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++H
Sbjct: 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 69
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EYI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 70 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ 129
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
D+A+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY
Sbjct: 130 TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 189
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S+ ++F+
Sbjct: 190 TTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFK 243
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 138/237 (58%), Positives = 188/237 (79%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 138/237 (58%), Positives = 188/237 (79%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 138/237 (58%), Positives = 188/237 (79%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 138/237 (58%), Positives = 188/237 (79%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 138/237 (58%), Positives = 188/237 (79%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 138/237 (58%), Positives = 188/237 (79%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 138/237 (58%), Positives = 188/237 (79%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 242
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 138/236 (58%), Positives = 183/236 (77%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
S K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 5 SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
FHS EY+ FL ++ PD + E+ K + +F GEDCP+F GLY+FC + G S+ A++LN
Sbjct: 65 FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
+I INW GGLHHAKKSEASGFCYVNDIV+ ILELLKYH RVLYIDIDVHHGDGV++A
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMF 237
FY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN+ RD +++ +F
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIF 239
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 139/245 (56%), Positives = 192/245 (78%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
MS + VSYFY+ +VGN +YG HPMKPHR+ + + L+L YG++KKMQI+RP KAS ++
Sbjct: 1 MSTRKVSYFYDNEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELT 60
Query: 61 RFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLN 120
FHS +YI+FL V+PD +H+++K L +F EDCP+F G+Y+FC + +G S+ A+++N
Sbjct: 61 NFHSDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNFCQISSGGSIGCAVKVN 120
Query: 121 NNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQD 180
+ D+AINW+GGLHHAKKSEASGFCY NDIV++ILELLK+H RVLYIDID+HHGDGV++
Sbjct: 121 SKESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEE 180
Query: 181 AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRER 240
AFY TDRVMTVSFHKYG +FP +GD+ +IGA+ G+YYS+N +D S++ +FR
Sbjct: 181 AFYTTDRVMTVSFHKYGD-YFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPI 239
Query: 241 VHSLL 245
+ S++
Sbjct: 240 IRSVM 244
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 137/244 (56%), Positives = 190/244 (77%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + G S+ A++LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++A
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
FY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S++ +F+ +
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245
Query: 242 HSLL 245
++
Sbjct: 246 SKVM 249
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 139/242 (57%), Positives = 187/242 (77%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K ++YFY+ D+GN+ YGA HPMKPHR+ + +SLI+ YGL+KKM+IYR A+ +MC+FH
Sbjct: 18 KRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQFH 77
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
+ EYIDF+ V+PD + TK +F G+DCP+F GL+++C + G S+EGA +LN
Sbjct: 78 TDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNRGK 137
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAIN++GGLHHAKKSEASGFCY+NDIV+ I+ELL+YHPRVLYIDIDVHHGDGV++AFY
Sbjct: 138 CDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAFY 197
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMT SFHKYG FFP +G++ +IG G+Y+SVNV RD +++K +F +
Sbjct: 198 TTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISK 256
Query: 244 LL 245
++
Sbjct: 257 II 258
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 139/242 (57%), Positives = 187/242 (77%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K ++YFY+ D+GN+ YGA HPMKPHR+ + +SLI+ YGL+KKM+IYR A+ +MC+FH
Sbjct: 18 KRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQFH 77
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
+ EYIDF+ V+PD + TK +F G+DCP+F GL+++C + G S+EGA +LN
Sbjct: 78 TDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNRGK 137
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAIN++GGLHHAKKSEASGFCY+NDIV+ I+ELL+YHPRVLYIDIDVHHGDGV++AFY
Sbjct: 138 CDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAFY 197
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMT SFHKYG FFP +G++ +IG G+Y+SVNV RD +++K +F +
Sbjct: 198 TTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISK 256
Query: 244 LL 245
++
Sbjct: 257 II 258
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 134/237 (56%), Positives = 181/237 (76%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
S +SYFY+ DVG+ ++G HPMKPHRL + + LIL YGLH KM++YRP+KA +M +
Sbjct: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQ 62
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
FHS +Y++FL ++P+ + + ++ GEDCP+F L++FC +Y G +++ A +LNN
Sbjct: 63 FHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNN 122
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
CDIAINW+GGLHHAKK +ASGFCY+ND+V+ ILELLK+HPRVLYIDIDVHHGDGV++A
Sbjct: 123 KLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEA 182
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHK+G FFP +GD+ EIG G++Y++NV +D SS R+FR
Sbjct: 183 FYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFR 239
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 136/237 (57%), Positives = 187/237 (78%)
Query: 9 FYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYI 68
F + D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++HS EYI
Sbjct: 15 FSSGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYI 74
Query: 69 DFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAI 128
FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN D+A+
Sbjct: 75 KFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAV 134
Query: 129 NWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRV 188
NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY TDRV
Sbjct: 135 NWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRV 194
Query: 189 MTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHSLL 245
MTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S+ ++F+ + ++
Sbjct: 195 MTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVM 250
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 137/242 (56%), Positives = 186/242 (76%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ V+YFY+ DVGN+ YGA HPMKPHR+ + +SLI+ YGL+KKM+IYR A+ +MC+FH
Sbjct: 19 RRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQFH 78
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
+ EYIDFL V+PD + + +F G+DCP+F GLY++CS+ G S+EGA +LN
Sbjct: 79 TDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRGK 138
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CD+A+N++GGLHHAKKSEASGFCY+NDIV+ I+ELL+YHPRVLYIDIDVHHGDGV++AFY
Sbjct: 139 CDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAFY 198
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMT SFHKYG FFP +G++ +IG G+ Y+VNV RD ++++ +F +
Sbjct: 199 TTDRVMTCSFHKYGE-FFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKK 257
Query: 244 LL 245
++
Sbjct: 258 IM 259
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 136/235 (57%), Positives = 178/235 (75%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ V+Y+Y+ ++GN++YG H MKPHR+ + + L+L YGL++ ++I+RP+ AS+ DM RFH
Sbjct: 13 RRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRFH 72
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EY+ FL + +PD + K + +F GEDCP+F GLY+FC + +G SL A +LN
Sbjct: 73 SDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQK 132
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
DIAINW GGLHHAKKSEASGFCY NDIV+ ILELLKYH RVLY+DIDVHHGDGV++AFY
Sbjct: 133 VDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAFY 192
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
TDRVMTVSFHKYG FFP +GD+ +IGA G+ YSVNV RD S++ +F+
Sbjct: 193 TTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFK 246
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 136/235 (57%), Positives = 178/235 (75%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ V+Y+Y+ ++GN++YG H MKPHR+ + + L+L YGL++ ++I+RP+ AS+ DM RFH
Sbjct: 13 RRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRFH 72
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EY+ FL + +PD + K + +F GEDCP+F GLY+FC + +G SL A +LN
Sbjct: 73 SDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQK 132
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
DIAINW GGLHHAKKSEASGFCY NDIV+ ILELLKYH RVLY+DIDVHHGDGV++AFY
Sbjct: 133 VDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAFY 192
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
TDRVMTVSFHKYG FFP +GD+ +IGA G+ YSVNV RD S++ +F+
Sbjct: 193 TTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFK 246
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 137/243 (56%), Positives = 183/243 (75%)
Query: 3 NKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRF 62
+K V+YFY+ DVGN+ Y + HPMKPHR+ + +SL++ Y L+KKM+IYR AS +M +F
Sbjct: 25 SKRVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYSLYKKMEIYRAKPASKFEMTQF 84
Query: 63 HSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNN 122
H+ EYIDFL V+PD + K ++ G+DCP+F GL++FC + G S+EGA +LN N
Sbjct: 85 HTDEYIDFLSKVTPDNMDAFAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 144
Query: 123 CCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAF 182
CDIA+NW+GGLHHAKKSEASGFCYVNDIV+ ILELL++ RVLY+DIDVHHGDGV++AF
Sbjct: 145 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAF 204
Query: 183 YLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVH 242
Y TDRVMTVSFHKYG +FP +G++ +IG G+YY+VN RD S+K +F +
Sbjct: 205 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKYYAVNFPLRDGIDDVSYKSIFEPVIK 263
Query: 243 SLL 245
S++
Sbjct: 264 SVM 266
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 136/240 (56%), Positives = 186/240 (77%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
+S K ++ + DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M
Sbjct: 11 VSLKLPLFYSSGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 70
Query: 61 RFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASL--EGAIQ 118
++HS +YI FL ++ PD + E++K + +F GEDCP+F GL++FC + G S+ A++
Sbjct: 71 KYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVGPASAVK 130
Query: 119 LNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGV 178
LN DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV
Sbjct: 131 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 190
Query: 179 QDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
++AFY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 191 EEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 249
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 134/242 (55%), Positives = 185/242 (76%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++H
Sbjct: 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH 69
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
S EYI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 70 SDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQ 129
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
D+A+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY
Sbjct: 130 TDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFY 189
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMTVS F P +GD+ +IGA G+YY+VN RD S+ ++F+ +
Sbjct: 190 TTDRVMTVSEVSMVNNF-PGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISK 248
Query: 244 LL 245
++
Sbjct: 249 VM 250
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 135/237 (56%), Positives = 180/237 (75%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
S VSY+Y+ D GNF+YG HPMKPHR+ + +SLI+ YGL++K+ + RP +AS+ ++ R
Sbjct: 6 SKSRVSYYYDGDFGNFYYGQGHPMKPHRVRMTHSLIVNYGLYRKLNVMRPARASFSEITR 65
Query: 62 FHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
+HS +YI+FL V D + T + +F+ GEDCP+F G+Y+FC + G SL A +LN
Sbjct: 66 YHSDDYINFLRNVKSDNMSTFTDQMARFSVGEDCPVFDGMYEFCQLSCGGSLAAAARLNR 125
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
+IAINW GGLHHAKKSEASGFCY NDIV+AILELLK+H RVLYIDIDVHHGDGV++A
Sbjct: 126 QESEIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKHHKRVLYIDIDVHHGDGVEEA 185
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
FY TDRVMTVSFHK+G +FP +GD+ ++GA G+YY++NV RD +++R+FR
Sbjct: 186 FYTTDRVMTVSFHKHGE-YFPGTGDLKDVGAGSGKYYALNVPLRDGVDDVTYERIFR 241
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 130/235 (55%), Positives = 177/235 (75%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ V YFY+P+VGN++YG HPMKPHR+ + ++L+ YGL + MQ+ +P+ A D+CRFH
Sbjct: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRFH 76
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
+ +Y+ FL +++P+ + + L +F GEDCP+F GLY FC Y G S+ G+++LN+
Sbjct: 77 ADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHGL 136
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIV+AILELLK H RVLY+DID+HHGDGV++AFY
Sbjct: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
TDRVMTVSFHK+G +FP +G + +IG G+YYS+NV D S+ +F+
Sbjct: 197 ATDRVMTVSFHKFGD-YFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFK 250
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 136/244 (55%), Positives = 179/244 (73%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ VSYFY P +G+++YG HPMKPHR+ + +SLI+ Y LH++++I RP A D+ RFH
Sbjct: 19 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIGRFH 78
Query: 64 SAEYIDFLHTVSPDKIHEHT--KFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNN 121
S EY+DFL +VSP+ + + + + L +F GEDCP+F GL+DFC G S+ A++LN
Sbjct: 79 SPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLNR 138
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDA 181
DIAINW GGLHHAKKSEASGFCYVNDIV+ ILELLK RVLYIDIDVHHGDGV++A
Sbjct: 139 QDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEEA 198
Query: 182 FYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
FY TDRVMTVSFHK+G FFP +G + ++GAE G+YY++NV D S + +FR +
Sbjct: 199 FYTTDRVMTVSFHKFGD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLI 257
Query: 242 HSLL 245
++
Sbjct: 258 QKVM 261
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 134/246 (54%), Positives = 179/246 (72%)
Query: 2 SNK-TVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
+NK VSY YNP+V FHYGA HPMKP RL + + L++ Y L++KM +Y P +A+ ++
Sbjct: 32 NNKYNVSYHYNPEVSRFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKDELL 91
Query: 61 RFHSAEYIDFLHTVSPDKIHEHTK-FLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQL 119
FHS +YIDFL +++P+K + L QF G+DCPIF G+YD+ ++Y GASL+ +L
Sbjct: 92 EFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDATRKL 151
Query: 120 NNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQ 179
+ DIAINWSGGLHHAKK E SGFCYVNDIV++I+ LL+ HPRV+YIDID+HHGDGVQ
Sbjct: 152 ISGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQ 211
Query: 180 DAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRE 239
+AFY TDRVMTVSFHKY G FFP +G + E+G G+ Y++NV RD S+ R+F+
Sbjct: 212 EAFYNTDRVMTVSFHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRLFKS 271
Query: 240 RVHSLL 245
+ L+
Sbjct: 272 IMEPLI 277
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 134/246 (54%), Positives = 179/246 (72%)
Query: 2 SNK-TVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
+NK VSY YNP+V FHYGA HPMKP RL + + L++ Y L++KM +Y P +A+ ++
Sbjct: 32 NNKYNVSYHYNPEVSRFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKDELL 91
Query: 61 RFHSAEYIDFLHTVSPDKIHEHTK-FLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQL 119
FHS +YIDFL +++P+K + L QF G+DCPIF G+YD+ ++Y GASL+ +L
Sbjct: 92 EFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDATRKL 151
Query: 120 NNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQ 179
+ DIAINWSGGLHHAKK E SGFCYVNDIV++I+ LL+ HPRV+YIDID+HHGDGVQ
Sbjct: 152 ISGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQ 211
Query: 180 DAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRE 239
+AFY TDRVMTVSFHKY G FFP +G + E+G G+ Y++NV RD S+ R+F+
Sbjct: 212 EAFYNTDRVMTVSFHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRLFKS 271
Query: 240 RVHSLL 245
+ L+
Sbjct: 272 IMEPLI 277
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 128/221 (57%), Positives = 175/221 (79%)
Query: 25 MKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTK 84
MKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++HS EYI FL ++ PD + E++K
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 85 FLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASG 144
+ +F GEDCP+F GL++FC + TG S+ GA++LN D+A+NW+GGLHHAKKSEASG
Sbjct: 61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120
Query: 145 FCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCS 204
FCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY TDRVMTVSFHKYG +FP +
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179
Query: 205 GDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHSLL 245
GD+ +IGA G+YY+VN RD S+ ++F+ + ++
Sbjct: 180 GDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVM 220
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 128/221 (57%), Positives = 175/221 (79%)
Query: 25 MKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTK 84
MKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++HS EYI FL ++ PD + E++K
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 85 FLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASG 144
+ +F GEDCP+F GL++FC + TG S+ GA++LN D+A+NW+GGLHHAKKSEASG
Sbjct: 61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120
Query: 145 FCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCS 204
FCYVNDIV+AILELLKYH RVLYIDID+HHGDGV++AFY TDRVMTVSFHKYG +FP +
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179
Query: 205 GDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHSLL 245
GD+ +IGA G+YY+VN RD S+ ++F+ + ++
Sbjct: 180 GDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVM 220
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 126/235 (53%), Positives = 167/235 (71%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K V+Y + VGN+HYG KHPMKPHR+++ N L++GYGLH KM ++ P A++ +M FH
Sbjct: 26 KRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEFH 85
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
+Y+DFL V+PD + QF G+DCP+F G Y+F GASL+ + +L
Sbjct: 86 REDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQ 145
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
DIAINWSGGLHHAK+ EASGFCYVNDIV+AIL +L++ PRVLYIDID+HHGDGVQ AFY
Sbjct: 146 TDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAFY 205
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
+DRV+TVSFHKY G FFP +G+ E G +GG+Y+++NV D + +F+
Sbjct: 206 ESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFK 260
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 128/242 (52%), Positives = 177/242 (73%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
K VSYFY+ DVGN+HYG +HPMKPHR+ ++++L++ Y L++K+ + P +A+ +DM R H
Sbjct: 6 KKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRCH 65
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
+ EYI+FL V+PD + + +F G+DCP+F GLY+FCS+ G S+ A +LN+
Sbjct: 66 TDEYIEFLWRVTPDTMEKFQPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNSGN 125
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
+IAINW+GGLHHAKK EASGFCYVNDI +A LELLKYH RVLYIDIDVHHGDGV++ FY
Sbjct: 126 AEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEFFY 185
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
TDRVMT SFHK+G +FP +G + + G G+ Y+VNV RD S++ +F+ +
Sbjct: 186 TTDRVMTCSFHKFGE-YFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVISH 244
Query: 244 LL 245
++
Sbjct: 245 IM 246
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 130/241 (53%), Positives = 174/241 (72%)
Query: 6 VSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSA 65
VSY +N V ++HYG KHPMKP RL + + L+ YGLHK M +Y A+ ++ +FHS
Sbjct: 28 VSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHSE 87
Query: 66 EYIDFLHTVSPDKIHEHTK-FLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCC 124
+Y++FL VSP+ ++ + L F G+DCPIF LYD+ ++YTGASL+ +L NN
Sbjct: 88 DYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQS 147
Query: 125 DIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYL 184
DIAINWSGGLHHAKK+ SGFCYVNDIV++IL LL+YHPR+LYIDID+HHGDGVQ+AFY
Sbjct: 148 DIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFYT 207
Query: 185 TDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHSL 244
TDRV T+SFHKY G FFP +GD+ EIG + G+++++NV D S+ +F+ V L
Sbjct: 208 TDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPL 267
Query: 245 L 245
+
Sbjct: 268 I 268
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 129/242 (53%), Positives = 177/242 (73%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ V+YFY+ DVGN+ YG H MKPHR+ + +SLI+ Y L+KKM+IYR A+ ++ +FH
Sbjct: 17 RRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQFH 76
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
+ EYIDF+ V+PD +H + F G+DCP+F GL +FC + G S+EGA +LN
Sbjct: 77 TDEYIDFIDRVTPDNLHLFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNRGQ 136
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
DIAIN++GGLHHAKKSEASGFCY NDIV+ I+ELL+YHPRVLYID DVHHGDGV++AFY
Sbjct: 137 ADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDGVEEAFY 196
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
DRVMT SFHK+G FFP +G++ +IG G+Y+++N+ RD +S+K +F +
Sbjct: 197 TNDRVMTCSFHKFGE-FFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITK 255
Query: 244 LL 245
++
Sbjct: 256 IM 257
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 129/242 (53%), Positives = 177/242 (73%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ V+YFY+ DVGN+ YG H MKPHR+ + +SLI+ Y L+KKM+IYR A+ ++ +FH
Sbjct: 17 RRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQFH 76
Query: 64 SAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC 123
+ EYIDF+ V+PD +H + F G+DCP+F GL +FC + G S+EGA +LN
Sbjct: 77 TDEYIDFIDRVTPDNLHLFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNRGQ 136
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
DIAIN++GGLHHAKKSEASGFCY NDIV+ I+ELL+YHPRVLYID DVHHGDGV++AFY
Sbjct: 137 ADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDGVEEAFY 196
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
DRVMT SFHK+G FFP +G++ +IG G+Y+++N+ RD +S+K +F +
Sbjct: 197 TNDRVMTCSFHKFGE-FFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITK 255
Query: 244 LL 245
++
Sbjct: 256 IM 257
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 446 (162.1 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
Identities = 82/111 (73%), Positives = 96/111 (86%)
Query: 116 AIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHG 175
A++LN DIA+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKYH RVLYIDID+HHG
Sbjct: 96 AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG 155
Query: 176 DGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
DGV++AFY TDRVMTVSFHKYG +FP +GD+ +IGA G+YY+VN RD
Sbjct: 156 DGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRD 205
Score = 254 (94.5 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
Identities = 40/83 (48%), Positives = 65/83 (78%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
+ + V Y+Y+ DVGN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 62 FHSAEYIDFLHTVSPDKIHEHTK 84
+HS +YI FL ++ PD + E++K
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSK 89
>UNIPROTKB|E7ESJ6 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
Bgee:E7ESJ6 Uniprot:E7ESJ6
Length = 219
Score = 501 (181.4 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 91/122 (74%), Positives = 104/122 (85%)
Query: 124 CDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFY 183
CDIAINW+GGLHHAKK EASGFCYVNDIVI ILELLKYHPRVLYIDID+HHGDGVQ+AFY
Sbjct: 48 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 107
Query: 184 LTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
LTDRVMTVSFHKYG FFP +GDMYE+GAE GRYY +NV RD S+K +F+ ++
Sbjct: 108 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQ 167
Query: 244 LL 245
++
Sbjct: 168 VV 169
Score = 193 (73.0 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQI 48
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM I
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMII 47
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 121/231 (52%), Positives = 168/231 (72%)
Query: 8 YFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEY 67
Y+Y+ D GN++YG HP+KPH++ + ++L L YGL++KM+IYRP+KA+ +M ++HS +Y
Sbjct: 1 YYYDGDAGNYNYGQGHPVKPHQIRMTHNLPLSYGLYRKMEIYRPHKANAEEMTKYHSDDY 60
Query: 68 IDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIA 127
I FL + PD + E+ K + +F G+DCP+F+GL +FC + TG S+ A++LN DIA
Sbjct: 61 IKFLRFIRPDSMSEYIKQMQRFNVGQDCPVFNGLSEFCQLSTGGSVASAVKLNKQQTDIA 120
Query: 128 INWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDR 187
+NW+G LHHAK SEASGFCYVNDIV+AILELLKY RVL +DID HHGDG ++AFY D
Sbjct: 121 VNWAGDLHHAKNSEASGFCYVNDIVLAILELLKYLQRVLCMDIDTHHGDGTEEAFYTADW 180
Query: 188 VMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
VMTVSFH FP +GD+ +IGA G+YY++N RD S + +F+
Sbjct: 181 VMTVSFHN-----FPVTGDLRDIGAGKGKYYAINYPLRDCIDDESCEAIFK 226
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 125/223 (56%), Positives = 162/223 (72%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
+ + V+Y+Y+ DVG+FHYG HPMKP RL V N L++ Y + K M + K D+
Sbjct: 26 VKKRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAADIS 85
Query: 61 RFHSAEYIDFLHTVSPDK-IHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQL 119
FH+ +Y++FL TV+P + L QF GEDCPIF GL+D+C++Y G S+EGA +L
Sbjct: 86 VFHTEDYVNFLQTVTPKLGLTMPDDVLRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRL 145
Query: 120 NNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQ 179
N+ DI INW GGLHHAKKSEASGFCYVNDIV+ ILELLKYH RVLYIDID+HHGDGVQ
Sbjct: 146 NHKMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQ 205
Query: 180 DAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
+AF +DRVMTVSFH++G +FP SG + + G G+Y+++NV
Sbjct: 206 EAFNNSDRVMTVSFHRFGQ-YFPGSGSIMDKGVGPGKYFAINV 247
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 126/251 (50%), Positives = 171/251 (68%)
Query: 2 SNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCR 61
S VS+ NP V H+G HPMKP RL++ L+L YG+H M +Y A+ ++
Sbjct: 35 SGYRVSWHANPAVELHHFGQSHPMKPWRLTLTKQLVLAYGMHHAMDLYHCRAATVEELSD 94
Query: 62 FHSAEYIDFLHTVSPDKIHE------HTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEG 115
FH+++Y+DFL TV P +++ ++ + +F G+DCPIF GL+ +CS+Y GASL+
Sbjct: 95 FHTSDYLDFLQTVVPGDMNDAQASKDFSENIVRFNFGDDCPIFDGLFQYCSLYAGASLDA 154
Query: 116 AIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHG 175
A +L NN DIAINWSGGLHHAKK+EASGFCYVNDIV+AIL+LL+ HPRV+YIDIDVHHG
Sbjct: 155 ARKLCNNQADIAINWSGGLHHAKKAEASGFCYVNDIVLAILQLLRIHPRVMYIDIDVHHG 214
Query: 176 DGVQDAFYLTDRVMTVSFHKYGG-GFFPCSGDMYEIGA----EGGRYYSVNVRNRDLSPH 230
DGV+ AF+ TDRV+TVSFHKY FFP +G + G G +++VNV D
Sbjct: 215 DGVEQAFWSTDRVLTVSFHKYDKENFFPGTGPLDSTGPTHPLNPGAHHAVNVPLHDGIDD 274
Query: 231 SSHKRMFRERV 241
S+ ++F++ V
Sbjct: 275 ESYVQLFKDVV 285
>TAIR|locus:2157111 [details] [associations]
symbol:HDA7 "histone deacetylase7" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
Genevestigator:Q9FH09 Uniprot:Q9FH09
Length = 409
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 115/245 (46%), Positives = 157/245 (64%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
+ VSYFY P +G+++YG P KP R+ V ++LIL Y LH+ M+I P A D +FH
Sbjct: 10 RRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKFH 69
Query: 64 SAEYIDFLHTVSPDKIHE-H---TKFLCQFASGEDC--PIFHGLYDFCSMYTGASLEGAI 117
S EYI+FL +V+P+ + + H ++ L +F D P+FH L+D+C Y G S+ A
Sbjct: 70 SLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAAA 129
Query: 118 QLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDG 177
+LN DIAINW+GG+HH KK +ASGF YVND+V+AILELLK RVLYI+I HGD
Sbjct: 130 KLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGDE 189
Query: 178 VQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMF 237
V++AF TDRVMTVSFHK G +GD+ + G G+YYS+N +D S + +F
Sbjct: 190 VEEAFKDTDRVMTVSFHKVGD-----TGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGLF 244
Query: 238 RERVH 242
+H
Sbjct: 245 IPVIH 249
>UNIPROTKB|H3BM24 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
Ensembl:ENST00000425835 Bgee:H3BM24 Uniprot:H3BM24
Length = 161
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 91/156 (58%), Positives = 127/156 (81%)
Query: 6 VSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSA 65
V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++HS
Sbjct: 2 VCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSD 61
Query: 66 EYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCD 125
EYI FL ++ PD + E++K + +F GEDCP+F GL++FC + TG S+ GA++LN D
Sbjct: 62 EYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTD 121
Query: 126 IAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKY 161
+A+NW+GGLHHAKKSEASGFCYVNDIV+AILELLKY
Sbjct: 122 MAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKY 157
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 104/220 (47%), Positives = 142/220 (64%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSVCDSLAK---VPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS D +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSEDGDDDHPDSI-EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTD 186
AINWSGG HHAKK EASGFCY+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T
Sbjct: 134 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTS 193
Query: 187 RVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
+VMTVS HK+ GFFP +GD+ ++G GRYYSVNV +D
Sbjct: 194 KVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 104/220 (47%), Positives = 142/220 (64%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSVCDSLAK---VPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS D +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSEDGDDDHPDSI-EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTD 186
AINWSGG HHAKK EASGFCY+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T
Sbjct: 134 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTS 193
Query: 187 RVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
+VMTVS HK+ GFFP +GD+ ++G GRYYSVNV +D
Sbjct: 194 KVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
>UNIPROTKB|I3L5X0 [details] [associations]
symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062889 EMBL:CU466457
Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
Length = 256
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 103/220 (46%), Positives = 142/220 (64%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSMCDSLAK---VPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS + +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSQEGDDDHPDSI-EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTD 186
AINWSGG HHAKK EASGFCY+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T
Sbjct: 134 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTS 193
Query: 187 RVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
+VMTVS HK+ GFFP +GD+ ++G GRYYSVNV +D
Sbjct: 194 KVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 103/220 (46%), Positives = 142/220 (64%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSMCDSLAK---VPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS + +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSQEGDDDHPDSV-EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTD 186
AINWSGG HHAKK EASGFCY+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T
Sbjct: 134 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTS 193
Query: 187 RVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
+VMTVS HK+ GFFP +GD+ ++G GRYYSVNV +D
Sbjct: 194 KVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 103/220 (46%), Positives = 142/220 (64%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 56 YIYSPEYVSMCDSLAK---VPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 112
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS + +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 113 YLQHLQKVSQEGDDDHPDSV-EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKV 171
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTD 186
AINWSGG HHAKK EASGFCY+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T
Sbjct: 172 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTS 231
Query: 187 RVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
+VMTVS HK+ GFFP +GD+ ++G GRYYSVNV +D
Sbjct: 232 KVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 271
>UNIPROTKB|A6NMT1 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
Bgee:A6NMT1 Uniprot:A6NMT1
Length = 253
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 103/220 (46%), Positives = 142/220 (64%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSMCDSLAKIPK---RASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS + +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSQEGDDDHPDSI-EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTD 186
AINWSGG HHAKK EASGFCY+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T
Sbjct: 134 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTS 193
Query: 187 RVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
+VMTVS HK+ GFFP +GD+ ++G GRYYSVNV +D
Sbjct: 194 KVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 103/220 (46%), Positives = 142/220 (64%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSMCDSLAKIPK---RASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS + +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSQEGDDDHPDSI-EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTD 186
AINWSGG HHAKK EASGFCY+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T
Sbjct: 134 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTS 193
Query: 187 RVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
+VMTVS HK+ GFFP +GD+ ++G GRYYSVNV +D
Sbjct: 194 KVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 97/200 (48%), Positives = 133/200 (66%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P R S+++SLI Y LHK+M+I +P AS +M FH+ Y+ L VS + +H +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 87 CQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFC 146
++ G DCP G++D+ + G ++ A L + C +AINWSGG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC 153
Query: 147 YVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGD 206
Y+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T +VMTVS HK+ GFFP +GD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 207 MYEIGAEGGRYYSVNVRNRD 226
M ++G GRYYSVNV +D
Sbjct: 214 MSDVGLGKGRYYSVNVPIQD 233
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 97/200 (48%), Positives = 133/200 (66%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P R S+++SLI Y LHK+M+I +P AS +M FH+ Y+ L VS + +H +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 87 CQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFC 146
++ G DCP G++D+ + G ++ A L + C +AINWSGG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC 153
Query: 147 YVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGD 206
Y+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T +VMTVS HK+ GFFP +GD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 207 MYEIGAEGGRYYSVNVRNRD 226
M ++G GRYYSVNV +D
Sbjct: 214 MSDVGLGKGRYYSVNVPIQD 233
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 96/149 (64%), Positives = 119/149 (79%)
Query: 92 GEDCPIFHGLYDFCSMYTGASL--EGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVN 149
GEDCP+F GL++FC + G S+ A++LN DIA+NW+GGLHHAKKSEASGFCYVN
Sbjct: 5 GEDCPVFDGLFEFCQLSAGGSVGPASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVN 64
Query: 150 DIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYE 209
DIV+AILELLKYH RVLYIDID+HHGDGV++AFY TDRVMTVSFHKYG +FP +GD+ +
Sbjct: 65 DIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRD 123
Query: 210 IGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
IGA G+YY+VN RD S++ +F+
Sbjct: 124 IGAGKGKYYAVNYPLRDGIDDESYEAIFK 152
>UNIPROTKB|E7ENE4 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI01018767
ProteinModelPortal:E7ENE4 SMR:E7ENE4 Ensembl:ENST00000373561
ArrayExpress:E7ENE4 Bgee:E7ENE4 Uniprot:E7ENE4
Length = 272
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 102/220 (46%), Positives = 140/220 (63%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSMCDSLAKIPK---RASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS + +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSQEGDDDHPDSI-EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTD 186
AINWSGG HHAKK EASGFCY+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T
Sbjct: 134 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTS 193
Query: 187 RVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
+VMTVS HK+ GFFP D+ ++G GRYYSVNV +D
Sbjct: 194 KVMTVSLHKFSPGFFPGKSDVSDVGLGKGRYYSVNVPIQD 233
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 521 (188.5 bits), Expect = 9.1e-49, P = 9.1e-49
Identities = 96/196 (48%), Positives = 134/196 (68%)
Query: 31 SVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFA 90
S+++SLI YGL K M++ +P+ AS +M FH+ Y+ LH +S D ++ + F
Sbjct: 1038 SMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKISQDGDNDDPQS-ADFG 1096
Query: 91 SGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVND 150
G DCP+ G++D+ + GA+L A L + CD+AINW+GG HHAKK EASGFCYVND
Sbjct: 1097 LGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGFCYVND 1156
Query: 151 IVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEI 210
V+ IL+L + + RVLY+D+D+HHGDGV+DAF T +VMTVS HK+ GFFP +GD+ +
Sbjct: 1157 AVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTDT 1216
Query: 211 GAEGGRYYSVNVRNRD 226
G GR+Y+VNV D
Sbjct: 1217 GLGKGRWYAVNVPFED 1232
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 101/222 (45%), Positives = 138/222 (62%)
Query: 6 VSYFYNPDVGNFHYGAKHPMK-PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHS 64
V+Y Y+P+ K P R S+++SLI Y L M I +P AS +M FH+
Sbjct: 16 VAYVYSPEYAAL---CDSLCKVPKRASMVHSLIEAYSLLDHMMIIKPKVASMEEMASFHT 72
Query: 65 AEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCC 124
Y+ L VS + +H + + ++ G DCP G++D+ + GA++ A L + C
Sbjct: 73 DAYLQHLQKVSEEGDDDHPESV-EYGLGYDCPATEGIFDYAAAVGGATITAAQCLLDGKC 131
Query: 125 DIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYL 184
+AINW GG HHAKK EASGFCY+ND V+ IL L + R+LYID+D+HHGDGV+DAF
Sbjct: 132 KVAINWPGGWHHAKKDEASGFCYLNDAVLGILRLRQKFDRILYIDLDLHHGDGVEDAFSF 191
Query: 185 TDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
T +VMTVS HK+ GFFP +GD+ +IG GRYYSVNV +D
Sbjct: 192 TSKVMTVSLHKFSPGFFPGTGDVTDIGLGKGRYYSVNVPIQD 233
>UNIPROTKB|E7EVA8 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
Uniprot:E7EVA8
Length = 299
Score = 382 (139.5 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 76/174 (43%), Positives = 107/174 (61%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSMCDSLAKIPK---RASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS + +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSQEGDDDHPDSI-EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQD 180
AINWSGG HHAKK EASGFCY+ND V+ IL L + R+LY+D+D+HHGDG D
Sbjct: 134 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGTGD 187
Score = 64 (27.6 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 186 DRVMTVSFH-KYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
+R++ V +G G +GD+ ++G GRYYSVNV +D
Sbjct: 170 ERILYVDLDLHHGDG----TGDVSDVGLGKGRYYSVNVPIQD 207
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 89/216 (41%), Positives = 125/216 (57%)
Query: 10 YNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHK--KMQIYRPYKASYHDMCRFHSAEY 67
Y+ D F YG HP K R + L+ YGL + ++I +A+ + FH+ +Y
Sbjct: 9 YSNDFARFSYGDDHPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALLTFHAPDY 68
Query: 68 IDFLHTVSPDKIHEHTKFLCQFASGE-DCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
+D L S + F ++ G+ D P+F GLYD+ + G ++E A + DI
Sbjct: 69 LDRLREFS-ESDDARADF--RYGLGDLDNPVFRGLYDWARLGAGGTIEAARLVAEEGYDI 125
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTD 186
A N +GG HHA +++ASGF Y+ND V+AI LL+ RV Y+DID HHGDGVQ+AFY TD
Sbjct: 126 AFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEKGLRVAYLDIDAHHGDGVQEAFYDTD 185
Query: 187 RVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
RV+T+S H+ G FFP +G E G G YSVN+
Sbjct: 186 RVLTISIHESGMYFFPGTGFEGETGTGAGTGYSVNI 221
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 89/216 (41%), Positives = 125/216 (57%)
Query: 10 YNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHK--KMQIYRPYKASYHDMCRFHSAEY 67
Y+ D F YG HP K R + L+ YGL + ++I +A+ + FH+ +Y
Sbjct: 9 YSNDFARFSYGDDHPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALLTFHAPDY 68
Query: 68 IDFLHTVSPDKIHEHTKFLCQFASGE-DCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
+D L S + F ++ G+ D P+F GLYD+ + G ++E A + DI
Sbjct: 69 LDRLREFS-ESDDARADF--RYGLGDLDNPVFRGLYDWARLGAGGTIEAARLVAEEGYDI 125
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTD 186
A N +GG HHA +++ASGF Y+ND V+AI LL+ RV Y+DID HHGDGVQ+AFY TD
Sbjct: 126 AFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEKGLRVAYLDIDAHHGDGVQEAFYDTD 185
Query: 187 RVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
RV+T+S H+ G FFP +G E G G YSVN+
Sbjct: 186 RVLTISIHESGMYFFPGTGFEGETGTGAGTGYSVNI 221
>UNIPROTKB|E7EW22 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00940139
ProteinModelPortal:E7EW22 SMR:E7EW22 Ensembl:ENST00000436675
ArrayExpress:E7EW22 Bgee:E7EW22 Uniprot:E7EW22
Length = 185
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 74/170 (43%), Positives = 105/170 (61%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSMCDSLAKIPK---RASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS + +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSQEGDDDHPDSI-EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGD 176
AINWSGG HHAKK EASGFCY+ND V+ IL L + R+LY+D+D+HHGD
Sbjct: 134 AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGD 183
>UNIPROTKB|A6NGJ7 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
Bgee:A6NGJ7 Uniprot:A6NGJ7
Length = 248
Score = 297 (109.6 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 53/93 (56%), Positives = 69/93 (74%)
Query: 134 LHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSF 193
LH + EASGFCY+ND V+ IL L + R+LY+D+D+HHGDGV+DAF T +VMTVS
Sbjct: 50 LHKQMRDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSL 109
Query: 194 HKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
HK+ GFFP +GD+ ++G GRYYSVNV +D
Sbjct: 110 HKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 142
Score = 60 (26.2 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQ 47
Y Y+P+ V AK P R S+++SLI Y LHK+M+
Sbjct: 18 YIYSPEYVSMCDSLAKIPK---RASMVHSLIEAYALHKQMR 55
>SGD|S000006272 [details] [associations]
symbol:HOS1 "Class I histone deacetylase (HDAC) family
member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
GermOnline:YPR068C Uniprot:Q12214
Length = 470
Score = 282 (104.3 bits), Expect = 4.5e-29, Sum P(2) = 4.5e-29
Identities = 54/115 (46%), Positives = 72/115 (62%)
Query: 94 DCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVI 153
DCPIF L +C + TGA+L L+ I INW GG HHA K ASGFCY+ND+V+
Sbjct: 169 DCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASGFCYINDVVL 228
Query: 154 AILELLKYH-PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDM 207
I L K ++ Y+D D+HHGDGV+ AF + ++ T+S H Y GFFP +G +
Sbjct: 229 LIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVHLYEPGFFPGTGSL 283
Score = 64 (27.6 bits), Expect = 4.5e-29, Sum P(2) = 4.5e-29
Identities = 20/51 (39%), Positives = 25/51 (49%)
Query: 24 PMKPHRLSVIN-SLILGYGL--HKKMQIYRPYKASYHDMCRFHSAEYIDFL 71
P H+ S + SLI Y L H + PY A D+ FHS YID+L
Sbjct: 20 PCNNHQKSQLTYSLINAYDLLQHFDEVLTFPY-ARKDDLLEFHSKSYIDYL 69
>UNIPROTKB|Q3AFN8 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 74/224 (33%), Positives = 118/224 (52%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
MS K Y+ D ++ HP+ P R ++ L+ + K+ +I P A+ ++
Sbjct: 1 MSGKAY-LIYSDDYLSYRLAEDHPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELY 59
Query: 61 RFHSAEYIDFLHTVSPDKIHEHTKFLCQFASG-EDCPIFHGLYDFCSMYTGASLEGAIQL 119
H Y++ + +S K E+ +F G ED P+F G+++ ++ G S GA +
Sbjct: 60 LVHDPAYVEAVMNLS--KNPENVNG-SRFGLGSEDNPVFSGMHEAAALVAGGSALGAELI 116
Query: 120 NNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQ 179
D N +GGLHHA + ASGFC ND+ +AI + + +V Y+D+D HHGDGVQ
Sbjct: 117 YEGEADHVFNIAGGLHHALRDAASGFCIYNDLAVAIAKFREKGLKVAYVDLDAHHGDGVQ 176
Query: 180 DAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYS-VNV 222
FY V+T+S H+ G FP +G + E+G EG Y + +N+
Sbjct: 177 WLFYSDPGVLTISIHETGRYLFPGTGSITELG-EGAAYGTKINI 219
>TIGR_CMR|CHY_0174 [details] [associations]
symbol:CHY_0174 "acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 74/224 (33%), Positives = 118/224 (52%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
MS K Y+ D ++ HP+ P R ++ L+ + K+ +I P A+ ++
Sbjct: 1 MSGKAY-LIYSDDYLSYRLAEDHPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELY 59
Query: 61 RFHSAEYIDFLHTVSPDKIHEHTKFLCQFASG-EDCPIFHGLYDFCSMYTGASLEGAIQL 119
H Y++ + +S K E+ +F G ED P+F G+++ ++ G S GA +
Sbjct: 60 LVHDPAYVEAVMNLS--KNPENVNG-SRFGLGSEDNPVFSGMHEAAALVAGGSALGAELI 116
Query: 120 NNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQ 179
D N +GGLHHA + ASGFC ND+ +AI + + +V Y+D+D HHGDGVQ
Sbjct: 117 YEGEADHVFNIAGGLHHALRDAASGFCIYNDLAVAIAKFREKGLKVAYVDLDAHHGDGVQ 176
Query: 180 DAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYS-VNV 222
FY V+T+S H+ G FP +G + E+G EG Y + +N+
Sbjct: 177 WLFYSDPGVLTISIHETGRYLFPGTGSITELG-EGAAYGTKINI 219
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 71/217 (32%), Positives = 108/217 (49%)
Query: 7 SYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
++ Y+ D + + HP R+++ L+ G QI P A+ ++ H+ E
Sbjct: 4 AFIYSDDFRGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEE 63
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
YI+ + K+ + + ED P+F +++ ++ G +L + +
Sbjct: 64 YINAVKRAGEGKLEKSIAMTYGLGT-EDTPMFPNMHEASALLVGGTLTAVDAVLSGKVKH 122
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLK-YHPRVLYIDIDVHHGDGVQDAFYLT 185
A+N GGLHH + +ASGFC ND IA+ + K Y RVLYID D HHGDGVQ +FY
Sbjct: 123 ALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWSFYDD 182
Query: 186 DRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
V T+S H+ G FP +G + E G G YS NV
Sbjct: 183 PNVCTISLHETGRYLFPGTGAVNERGQGNGYSYSFNV 219
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 71/217 (32%), Positives = 108/217 (49%)
Query: 7 SYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
++ Y+ D + + HP R+++ L+ G QI P A+ ++ H+ E
Sbjct: 4 AFIYSDDFRGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEE 63
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
YI+ + K+ + + ED P+F +++ ++ G +L + +
Sbjct: 64 YINAVKRAGEGKLEKSIAMTYGLGT-EDTPMFPNMHEASALLVGGTLTAVDAVLSGKVKH 122
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLK-YHPRVLYIDIDVHHGDGVQDAFYLT 185
A+N GGLHH + +ASGFC ND IA+ + K Y RVLYID D HHGDGVQ +FY
Sbjct: 123 ALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWSFYDD 182
Query: 186 DRVMTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
V T+S H+ G FP +G + E G G YS NV
Sbjct: 183 PNVCTISLHETGRYLFPGTGAVNERGQGNGYSYSFNV 219
>UNIPROTKB|E5RG37 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00976554 ProteinModelPortal:E5RG37 SMR:E5RG37
Ensembl:ENST00000523628 ArrayExpress:E5RG37 Bgee:E5RG37
Uniprot:E5RG37
Length = 103
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 50/103 (48%), Positives = 78/103 (75%)
Query: 25 MKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTK 84
MKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++HS EYI FL ++ PD + E++K
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 85 FLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIA 127
+ +F GEDCP+F GL++FC + TG S+ GA++LN D+A
Sbjct: 61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMA 103
>UNIPROTKB|C9J8F0 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00878343
ProteinModelPortal:C9J8F0 SMR:C9J8F0 STRING:C9J8F0 PRIDE:C9J8F0
Ensembl:ENST00000421523 BindingDB:C9J8F0 ArrayExpress:C9J8F0
Bgee:C9J8F0 Uniprot:C9J8F0
Length = 132
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 57/133 (42%), Positives = 82/133 (61%)
Query: 32 VINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFAS 91
+++SLI Y LHK+M+I +P AS +M FH+ Y+ L VS + +H + ++
Sbjct: 1 MVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSI-EYGL 59
Query: 92 GEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDI 151
G DCP G++D+ + GA++ A L + C +AINWSGG HHAKK EASGFCY+ND
Sbjct: 60 GYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDA 119
Query: 152 VIAILELLKYHPR 164
V+ IL L + R
Sbjct: 120 VLGILRLRRKFER 132
>UNIPROTKB|E5RH52 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00980006 ProteinModelPortal:E5RH52 SMR:E5RH52
Ensembl:ENST00000521610 ArrayExpress:E5RH52 Bgee:E5RH52
Uniprot:E5RH52
Length = 100
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 48/96 (50%), Positives = 75/96 (78%)
Query: 25 MKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTK 84
MKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++HS EYI FL ++ PD + E++K
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 85 FLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLN 120
+ +F GEDCP+F GL++FC + TG S+ GA++LN
Sbjct: 61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLN 96
>UNIPROTKB|E7EWI8 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854 ChiTaRS:HDAC3
IPI:IPI00930193 ProteinModelPortal:E7EWI8 SMR:E7EWI8
Ensembl:ENST00000523353 ArrayExpress:E7EWI8 Bgee:E7EWI8
Uniprot:E7EWI8
Length = 128
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 48/68 (70%), Positives = 60/68 (88%)
Query: 4 KTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFH 63
KTV+YFY+PDVGNFHYGA HPMKPHRL++ +SL+L YGL+KKM +++PY+AS HDMCRFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 64 SAEYIDFL 71
S +Y D L
Sbjct: 63 SEDYTDSL 70
>UNIPROTKB|E5RFP9 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00974336 ProteinModelPortal:E5RFP9 SMR:E5RFP9
Ensembl:ENST00000521163 ArrayExpress:E5RFP9 Bgee:E5RFP9
Uniprot:E5RFP9
Length = 109
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 47/100 (47%), Positives = 72/100 (72%)
Query: 4 KTVSYFYNP-------DVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASY 56
K V Y+Y+ D+GN++YG HPMKPHR+ + ++L+L YGL++KM+IYRP+KA+
Sbjct: 10 KKVCYYYDVCVFSILGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATA 69
Query: 57 HDMCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCP 96
+M ++HS EYI FL ++ PD + E++K + +F GEDCP
Sbjct: 70 EEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCP 109
>UNIPROTKB|E5RHE7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00979387 ProteinModelPortal:E5RHE7 SMR:E5RHE7
Ensembl:ENST00000522371 ArrayExpress:E5RHE7 Bgee:E5RHE7
Uniprot:E5RHE7
Length = 86
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 43/86 (50%), Positives = 67/86 (77%)
Query: 25 MKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTK 84
MKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++HS EYI FL ++ PD + E++K
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 85 FLCQFASGEDCPIFHGLYDFCSMYTG 110
+ +F GEDCP+F GL++FC + TG
Sbjct: 61 QMQRFNVGEDCPVFDGLFEFCQLSTG 86
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 250 (93.1 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 51/119 (42%), Positives = 72/119 (60%)
Query: 94 DCPIFHGLYDFCSMYTGASLEGA---IQLNNNCCD--IAINWSGGLHHAKKSEASGFCYV 148
DC F L + + +S+ A +Q D IA+NW GG HH KS A+GFCYV
Sbjct: 155 DCYPFPSLDLYVQLTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSHAAGFCYV 214
Query: 149 NDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDM 207
ND+V++I L K V Y+D+D+HHGDGV++AF + +V T S H+Y GF+P +G +
Sbjct: 215 NDVVLSINILRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIGFYPGTGSL 273
Score = 38 (18.4 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 14/54 (25%), Positives = 21/54 (38%)
Query: 24 PMKPHRLSVINSLILGYGLHKKMQ-IYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
P R S++ LI Y L Y A D+ +H E++ H + P
Sbjct: 67 PSNKGRQSLVLGLIEAYKLIDLCDGTIDIYPAQTKDLTTYHDDEFVK--HLMGP 118
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 250 (93.1 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 51/119 (42%), Positives = 72/119 (60%)
Query: 94 DCPIFHGLYDFCSMYTGASLEGA---IQLNNNCCD--IAINWSGGLHHAKKSEASGFCYV 148
DC F L + + +S+ A +Q D IA+NW GG HH KS A+GFCYV
Sbjct: 155 DCYPFPSLDLYVQLTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSHAAGFCYV 214
Query: 149 NDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDM 207
ND+V++I L K V Y+D+D+HHGDGV++AF + +V T S H+Y GF+P +G +
Sbjct: 215 NDVVLSINILRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIGFYPGTGSL 273
Score = 38 (18.4 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 14/54 (25%), Positives = 21/54 (38%)
Query: 24 PMKPHRLSVINSLILGYGLHKKMQ-IYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
P R S++ LI Y L Y A D+ +H E++ H + P
Sbjct: 67 PSNKGRQSLVLGLIEAYKLIDLCDGTIDIYPAQTKDLTTYHDDEFVK--HLMGP 118
>UNIPROTKB|A6NGT0 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00642981
ProteinModelPortal:A6NGT0 SMR:A6NGT0 STRING:A6NGT0
Ensembl:ENST00000373560 ArrayExpress:A6NGT0 Bgee:A6NGT0
Uniprot:A6NGT0
Length = 156
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 53/135 (39%), Positives = 77/135 (57%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSMCDSLAKIPK---RASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS + +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSQEGDDDHPDSI-EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKKSE 141
AINWSGG HHAKK E
Sbjct: 134 AINWSGGWHHAKKYE 148
>UNIPROTKB|A6ND12 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 CTD:55869
KO:K11405 EMBL:AL133500 EMBL:BX295542 UniGene:Hs.310536 DNASU:55869
GeneID:55869 KEGG:hsa:55869 HGNC:HGNC:13315 PharmGKB:PA37766
ChiTaRS:HDAC8 GenomeRNAi:55869 NextBio:61182 IPI:IPI00645419
RefSeq:NP_001159894.1 ProteinModelPortal:A6ND12 SMR:A6ND12
STRING:A6ND12 PRIDE:A6ND12 Ensembl:ENST00000373556 UCSC:uc022byw.1
ArrayExpress:A6ND12 Bgee:A6ND12 Uniprot:A6ND12
Length = 158
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 52/133 (39%), Positives = 76/133 (57%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSMCDSLAKIPK---RASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS + +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSQEGDDDHPDSI-EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKK 139
AINWSGG HHAKK
Sbjct: 134 AINWSGGWHHAKK 146
>UNIPROTKB|A6NJR3 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 CTD:55869
KO:K11405 EMBL:AL133500 EMBL:BX295542 IPI:IPI00515065
UniGene:Hs.310536 DNASU:55869 GeneID:55869 KEGG:hsa:55869
HGNC:HGNC:13315 PharmGKB:PA37766 ChiTaRS:HDAC8 GenomeRNAi:55869
NextBio:61182 RefSeq:NP_001159892.1 ProteinModelPortal:A6NJR3
SMR:A6NJR3 STRING:A6NJR3 Ensembl:ENST00000373554 UCSC:uc022byx.1
BindingDB:A6NJR3 ArrayExpress:A6NJR3 Bgee:A6NJR3 Uniprot:A6NJR3
Length = 146
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 52/133 (39%), Positives = 76/133 (57%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAE 66
Y Y+P+ V AK P R S+++SLI Y LHK+M+I +P AS +M FH+
Sbjct: 18 YIYSPEYVSMCDSLAKIPK---RASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 67 YIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDI 126
Y+ L VS + +H + ++ G DCP G++D+ + GA++ A L + C +
Sbjct: 75 YLQHLQKVSQEGDDDHPDSI-EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKV 133
Query: 127 AINWSGGLHHAKK 139
AINWSGG HHAKK
Sbjct: 134 AINWSGGWHHAKK 146
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 195 (73.7 bits), Expect = 9.9e-18, Sum P(2) = 9.9e-18
Identities = 38/91 (41%), Positives = 54/91 (59%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I L ++L +D+DVHHG+G Q AFY ++ +S
Sbjct: 210 HHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 269
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VN+
Sbjct: 270 LHRYDEGNFFPGSGAPNEVGVGLGEGYNVNI 300
Score = 71 (30.1 bits), Expect = 9.9e-18, Sum P(2) = 9.9e-18
Identities = 42/151 (27%), Positives = 63/151 (41%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP---DKI 79
HP R+ I S + GL K + + KAS ++ HS E+ L+ SP K+
Sbjct: 82 HPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHS-EHHSLLYGTSPLDGQKL 140
Query: 80 HEHTKF---LCQFASGEDCPIFHGL-YDFCSMYTGASLEGAIQLNNNCC-DIAINW-SGG 133
T +F S C GL D +++ GA ++ C ++A SG
Sbjct: 141 DPRTLLGDDSRKFFSSLPCG---GLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGE 197
Query: 134 L-----------HHAKKSEASGFCYVNDIVI 153
L HHA++S A GFC+ N + I
Sbjct: 198 LKNGFAVVRPPGHHAEESAAMGFCFFNSVAI 228
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 194 (73.4 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I +L+ +VL +D D+HHG+G Q AFY V+ +S
Sbjct: 372 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 431
Query: 193 FHKY-GGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VNV
Sbjct: 432 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNV 462
Score = 73 (30.8 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 40/156 (25%), Positives = 66/156 (42%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
GN H HP R+ I S + GL K + R KA+ ++ HS EY L+
Sbjct: 239 GNTHV---HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLYGT 294
Query: 75 SP-DKIHEHTKFLCQFASGEDCPIFH--GL-YDFCSMYTGASLEGAIQLNNNCC-DIAIN 129
SP ++ +K L S + + G+ D +++ A+++ C ++A
Sbjct: 295 SPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFK 354
Query: 130 WSGGL------------HHAKKSEASGFCYVNDIVI 153
+ G HHA++S A GFC+ N + I
Sbjct: 355 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAI 390
>UNIPROTKB|E5RGV4 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00978755 ProteinModelPortal:E5RGV4 SMR:E5RGV4
Ensembl:ENST00000518690 ArrayExpress:E5RGV4 Bgee:E5RGV4
Uniprot:E5RGV4
Length = 71
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 35/71 (49%), Positives = 55/71 (77%)
Query: 25 MKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTK 84
MKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++HS EYI FL ++ PD + E++K
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 85 FLCQFASGEDC 95
+ +F GEDC
Sbjct: 61 QMQRFNVGEDC 71
>UNIPROTKB|E1C7C0 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0032869 "cellular response to
insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
Length = 1069
Score = 197 (74.4 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 39/91 (42%), Positives = 57/91 (62%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELL-KYH-PRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N I I L K + ++L +D+DVHHG+G Q AFY ++ VS
Sbjct: 783 HHAEESTAMGFCFFNSIAITAKYLRDKLNIGKILIVDLDVHHGNGTQQAFYADPSILYVS 842
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G+ G +++N+
Sbjct: 843 LHRYDEGNFFPGSGAPNEVGSGPGEGFNINI 873
Score = 68 (29.0 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 43/157 (27%), Positives = 66/157 (42%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
GN+ A HP R+ I S + GL K + R KAS ++ HS E+ L+
Sbjct: 650 GNY---ANHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQLVHS-EHHSLLYGT 705
Query: 75 SP---DKIHEHTKFLCQFASGEDCPI-FHGL-YDFCSMYTGASLEGAIQLNNNCC-DIAI 128
SP K+ + K L + + GL D +++ GA ++ C ++A
Sbjct: 706 SPLNRQKL-DPRKLLGNVSQKLFSLLPCGGLGVDSDTVWNELHSAGAARMAVGCVIELAA 764
Query: 129 NWSG-----GL-------HHAKKSEASGFCYVNDIVI 153
+ G HHA++S A GFC+ N I I
Sbjct: 765 RVASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAI 801
>UNIPROTKB|F1LSN5 [details] [associations]
symbol:F1LSN5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 IPI:IPI01016416
Ensembl:ENSRNOT00000011159 ArrayExpress:F1LSN5 Uniprot:F1LSN5
Length = 932
Score = 200 (75.5 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 39/91 (42%), Positives = 56/91 (61%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA S A GFC+ N + IA +L ++ ++L +D DVHHG+G Q FY RV+ +S
Sbjct: 650 HHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQQTFYQDPRVLYIS 709
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H++ G FFP SG + E+G G ++VNV
Sbjct: 710 LHRHDDGNFFPGSGAVDEVGTGSGEGFNVNV 740
Score = 59 (25.8 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
+KHP R+ I S + GL + + R KAS ++ HS ++ L+ +P
Sbjct: 520 SKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV-LLYGTNP 574
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 195 (73.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I +L+ +VL +D D+HHG+G Q AFY V+ +S
Sbjct: 821 HHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 880
Query: 193 FHKY-GGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VNV
Sbjct: 881 LHRYDNGNFFPGSGAPEEVGGGPGMGYNVNV 911
Score = 72 (30.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 40/157 (25%), Positives = 65/157 (41%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
GN H HP R+ I S + GL K + R KA+ ++ HS EY L+
Sbjct: 688 GNTHV---HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLYGT 743
Query: 75 SP---DKIHEHTKFLCQFASGEDCPI-FHGL-YDFCSMYTGASLEGAIQLNNNCC-DIAI 128
SP K+ + K L + + G+ D +++ A+++ C ++A
Sbjct: 744 SPLNRQKL-DSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAF 802
Query: 129 NWSGGL------------HHAKKSEASGFCYVNDIVI 153
+ G HHA++S A GFC+ N + I
Sbjct: 803 KVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAI 839
>TAIR|locus:2201826 [details] [associations]
symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
Uniprot:Q94EJ2
Length = 377
Score = 209 (78.6 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 63/209 (30%), Positives = 107/209 (51%)
Query: 22 KHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHE 81
KHP R+ + S++ + + + A ++ FH++EYI+ L V DK E
Sbjct: 38 KHPENADRVRNMLSILRRGPIAPHVNWFTGLPAIVSELLMFHTSEYIEKL--VEADKSGE 95
Query: 82 HTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNC---CDIAINWSGGLHHAK 138
C+ A+G + G ++ + G +L A+Q +C A+ G HH++
Sbjct: 96 R----CEIAAGTF--MSPGSWEAALLAAGTTLS-AMQHILDCHGKIAYALVRPPG-HHSQ 147
Query: 139 KSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFH-K 195
++A G+C++N+ +A+ L RV IDIDVH+G+G + FY +D+V+TVS H
Sbjct: 148 PTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNGTAEGFYTSDKVLTVSLHMN 207
Query: 196 YG--GGFFPCSGDMYEIGAEGGRYYSVNV 222
+G G P G + E+G + G Y++NV
Sbjct: 208 HGSWGSSHPQKGSIDELGEDVGLGYNLNV 236
>UNIPROTKB|Q9UQL6 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0010830 "regulation of myotube differentiation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
protein binding" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
Ensembl:ENST00000225983 Ensembl:ENST00000336057
Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
GO:GO:0090051 Uniprot:Q9UQL6
Length = 1122
Score = 194 (73.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I +L+ +VL +D D+HHG+G Q AFY V+ +S
Sbjct: 832 HHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 891
Query: 193 FHKY-GGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VNV
Sbjct: 892 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNV 922
Score = 73 (30.8 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 40/156 (25%), Positives = 66/156 (42%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
GN H HP R+ I S + GL K + R KA+ ++ HS EY L+
Sbjct: 699 GNTHV---HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLYGT 754
Query: 75 SP-DKIHEHTKFLCQFASGEDCPIFH--GL-YDFCSMYTGASLEGAIQLNNNCC-DIAIN 129
SP ++ +K L S + + G+ D +++ A+++ C ++A
Sbjct: 755 SPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLLELAFK 814
Query: 130 WSGGL------------HHAKKSEASGFCYVNDIVI 153
+ G HHA++S A GFC+ N + I
Sbjct: 815 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAI 850
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 193 (73.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I +L+ +VL +D D+HHG+G Q AFY V+ +S
Sbjct: 618 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 677
Query: 193 FHKY-GGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VNV
Sbjct: 678 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNV 708
Score = 72 (30.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 40/157 (25%), Positives = 65/157 (41%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
GN H HP R+ I S + GL K + R KA+ ++ HS EY L+
Sbjct: 485 GNTHV---HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLYGT 540
Query: 75 SP---DKIHEHTKFLCQFASGEDCPI-FHGL-YDFCSMYTGASLEGAIQLNNNCC-DIAI 128
SP K+ + K L + + G+ D +++ A+++ C ++A
Sbjct: 541 SPLNRQKL-DSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAF 599
Query: 129 NWSGGL------------HHAKKSEASGFCYVNDIVI 153
+ G HHA++S A GFC+ N + I
Sbjct: 600 KVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAI 636
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 193 (73.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I +L+ +VL +D D+HHG+G Q AFY V+ +S
Sbjct: 618 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 677
Query: 193 FHKY-GGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VNV
Sbjct: 678 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNV 708
Score = 72 (30.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 40/157 (25%), Positives = 65/157 (41%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
GN H HP R+ I S + GL K + R KA+ ++ HS EY L+
Sbjct: 485 GNTHV---HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLYGT 540
Query: 75 SP---DKIHEHTKFLCQFASGEDCPI-FHGL-YDFCSMYTGASLEGAIQLNNNCC-DIAI 128
SP K+ + K L + + G+ D +++ A+++ C ++A
Sbjct: 541 SPLNRQKL-DSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAF 599
Query: 129 NWSGGL------------HHAKKSEASGFCYVNDIVI 153
+ G HHA++S A GFC+ N + I
Sbjct: 600 KVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAI 636
>UNIPROTKB|F1MWS5 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
Length = 895
Score = 195 (73.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I L ++L +D+DVHHG+G Q AFY ++ +S
Sbjct: 782 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPNILYIS 841
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y++N+
Sbjct: 842 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINI 872
Score = 68 (29.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 41/151 (27%), Positives = 63/151 (41%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP---DKI 79
HP R+ I S + GL K + + KAS ++ HS E+ L+ +P K+
Sbjct: 654 HPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHS-EHHSLLYGTNPLDGQKL 712
Query: 80 HEHTKF---LCQFASGEDCPIFHGL-YDFCSMYTGASLEGAIQLNNNCC-DIAINW-SGG 133
T +F S C GL D +++ GA ++ C ++A SG
Sbjct: 713 DPRTLLGDSSQKFFSSLPCG---GLGVDSDTIWNELHSSGAARMAVGCVIELASRVASGE 769
Query: 134 L-----------HHAKKSEASGFCYVNDIVI 153
L HHA++S A GFC+ N + I
Sbjct: 770 LKNGFAVVRPPGHHAEESTAMGFCFFNSVAI 800
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 194 (73.4 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I +L+ +VL +D D+HHG+G Q AFY V+ +S
Sbjct: 800 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 859
Query: 193 FHKY-GGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VNV
Sbjct: 860 LHRYDNGNFFPGSGAPEEVGGGPGIGYNVNV 890
Score = 72 (30.4 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 40/157 (25%), Positives = 65/157 (41%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
GN H HP R+ I S + GL K + R KA+ ++ HS EY L+
Sbjct: 667 GNTHV---HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLYGT 722
Query: 75 SP---DKIHEHTKFLCQFASGEDCPI-FHGL-YDFCSMYTGASLEGAIQLNNNCC-DIAI 128
SP K+ + K L + + G+ D +++ A+++ C ++A
Sbjct: 723 SPLNRQKL-DSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAF 781
Query: 129 NWSGGL------------HHAKKSEASGFCYVNDIVI 153
+ G HHA++S A GFC+ N + I
Sbjct: 782 KVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAI 818
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 194 (73.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I +L+ +VL +D D+HHG+G Q AFY V+ +S
Sbjct: 827 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 886
Query: 193 FHKY-GGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VNV
Sbjct: 887 LHRYDNGNFFPGSGAPEEVGGGPGIGYNVNV 917
Score = 72 (30.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 40/157 (25%), Positives = 65/157 (41%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
GN H HP R+ I S + GL K + R KA+ ++ HS EY L+
Sbjct: 694 GNTHV---HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLYGT 749
Query: 75 SP---DKIHEHTKFLCQFASGEDCPI-FHGL-YDFCSMYTGASLEGAIQLNNNCC-DIAI 128
SP K+ + K L + + G+ D +++ A+++ C ++A
Sbjct: 750 SPLNRQKL-DSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAF 808
Query: 129 NWSGGL------------HHAKKSEASGFCYVNDIVI 153
+ G HHA++S A GFC+ N + I
Sbjct: 809 KVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAI 845
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 194 (73.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I +L+ +VL +D D+HHG+G Q AFY V+ +S
Sbjct: 835 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 894
Query: 193 FHKY-GGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VNV
Sbjct: 895 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNV 925
Score = 72 (30.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 40/157 (25%), Positives = 65/157 (41%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
GN H HP R+ I S + GL K + R KA+ ++ HS EY L+
Sbjct: 702 GNTHV---HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLYGT 757
Query: 75 SP---DKIHEHTKFLCQFASGEDCPI-FHGL-YDFCSMYTGASLEGAIQLNNNCC-DIAI 128
SP K+ + K L + + G+ D +++ A+++ C ++A
Sbjct: 758 SPLNRQKL-DSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAF 816
Query: 129 NWSGGL------------HHAKKSEASGFCYVNDIVI 153
+ G HHA++S A GFC+ N + I
Sbjct: 817 KVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAI 853
>TIGR_CMR|SPO_2177 [details] [associations]
symbol:SPO_2177 "acetoin utilization protein AcuC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
Uniprot:Q5LRF3
Length = 368
Score = 206 (77.6 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 68/212 (32%), Positives = 98/212 (46%)
Query: 19 YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDK 78
YGA HP+ R+S + L G Q +A + FH+ +YI L ++
Sbjct: 13 YGAVHPLAIPRVSTVIDLCRAMGWFAPGQYRTSPRARPAALRAFHTPDYIAALQQAEAEQ 72
Query: 79 -IHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHA 137
+ E T+ + + P+F +Y + G SL A + N GG HH
Sbjct: 73 AVSEETRARHGLGTLPN-PVFAEMYRRPATAAGGSLLAAELVARG--HRVFNPGGGTHHG 129
Query: 138 KKSEASGFCYVNDIVIAILELLKYH-PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKY 196
A GFCY+ND V+AIL L + RV Y+DID HH DGV AF + V +S H+
Sbjct: 130 FADRAGGFCYLNDPVLAILALQRLGCARVAYVDIDAHHCDGVASAFQGSQTVRMISIHE- 188
Query: 197 GGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLS 228
+P +G + E A GG ++ V RDL+
Sbjct: 189 -ARRWPFTGAL-EDDA-GGAALNLPVA-RDLN 216
>MGI|MGI:1333784 [details] [associations]
symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=IPI]
[GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
"transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
"histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
"heart development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
differentiation" evidence=IDA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
"response to drug" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043393 "regulation of protein binding"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
fiber development" evidence=IGI] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0061333 "renal tubule
morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=ISO] [GO:0071498 "cellular response to
fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
of cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:2000179 "positive regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=IMP] InterPro:IPR017320
PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
Length = 1113
Score = 194 (73.4 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I +L+ +VL +D D+HHG+G Q AFY V+ +S
Sbjct: 823 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 882
Query: 193 FHKY-GGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VNV
Sbjct: 883 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNV 913
Score = 70 (29.7 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 40/157 (25%), Positives = 65/157 (41%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
GN H HP R+ I S + GL K + R KA+ ++ HS EY L+
Sbjct: 690 GNTHV---HPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQTVHS-EYHTLLYGT 745
Query: 75 SP---DKIHEHTKFLCQFASGEDCPI-FHGL-YDFCSMYTGASLEGAIQLNNNCC-DIAI 128
SP K+ + K L + + G+ D +++ A+++ C ++A
Sbjct: 746 SPLNRQKL-DSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAF 804
Query: 129 NWSGGL------------HHAKKSEASGFCYVNDIVI 153
+ G HHA++S A GFC+ N + I
Sbjct: 805 KVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAI 841
>UNIPROTKB|Q5R902 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
Uniprot:Q5R902
Length = 1122
Score = 194 (73.4 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I +L+ +VL +D D+HHG+G Q AFY V+ +S
Sbjct: 832 HHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 891
Query: 193 FHKY-GGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VNV
Sbjct: 892 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNV 922
Score = 69 (29.3 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 39/156 (25%), Positives = 65/156 (41%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
GN H HP R+ S + GL K + R KA+ ++ HS EY L+
Sbjct: 699 GNTHV---HPEHAGRIQSTWSRLQETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLYGT 754
Query: 75 SP-DKIHEHTKFLCQFASGEDCPIFH--GL-YDFCSMYTGASLEGAIQLNNNCC-DIAIN 129
SP ++ +K L S + + G+ D +++ A+++ C ++A
Sbjct: 755 SPLNRQKVDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLLELAFK 814
Query: 130 WSGGL------------HHAKKSEASGFCYVNDIVI 153
+ G HHA++S A GFC+ N + I
Sbjct: 815 VAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAI 850
>UNIPROTKB|I3LM52 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
Uniprot:I3LM52
Length = 1052
Score = 192 (72.6 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S GFCY N + IA +L+ + + L +D DVHHG+G Q AFY V+ VS
Sbjct: 770 HHAEESTPMGFCYFNSVAIAAKLLQQRLHVSKTLVVDWDVHHGNGTQQAFYSDPSVLYVS 829
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G ++VN+
Sbjct: 830 LHRYDDGNFFPGSGAPDEVGTGPGVGFNVNM 860
Score = 70 (29.7 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 38/149 (25%), Positives = 60/149 (40%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP---DKI 79
HP R+ I S + GL K + R KA+ ++ HS + L+ +P K+
Sbjct: 643 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHA-LLYGTNPLNRQKL 701
Query: 80 HEHTKFLCQFASG-EDCPIFHGLYDFCSMYTGASLEGAIQLNNNCC-DIAINWSGGL--- 134
+ K L S P D ++++ GA +L C ++A + G
Sbjct: 702 -DSKKLLGSLTSVFVRLPCGGVGVDSDTIWSEVHSSGAARLAVGCVVELAFKVATGELKN 760
Query: 135 ---------HHAKKSEASGFCYVNDIVIA 154
HHA++S GFCY N + IA
Sbjct: 761 GFAVVRPPGHHAEESTPMGFCYFNSVAIA 789
>UNIPROTKB|Q9UKV0 [details] [associations]
symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
"B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
response" evidence=TAS] [GO:0042113 "B cell activation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0048742
"regulation of skeletal muscle fiber development" evidence=ISS]
[GO:0051153 "regulation of striated muscle cell differentiation"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
"histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
"positive regulation of cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
Ensembl:ENST00000405010 Ensembl:ENST00000406451
Ensembl:ENST00000417496 Ensembl:ENST00000432645
Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
GermOnline:ENSG00000048052 Uniprot:Q9UKV0
Length = 1011
Score = 194 (73.4 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I L ++L +D+DVHHG+G Q AFY ++ +S
Sbjct: 782 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 841
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y++N+
Sbjct: 842 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINI 872
Score = 66 (28.3 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 40/151 (26%), Positives = 63/151 (41%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEH 82
HP R+ I S + GL K + + KAS ++ HS E+ L+ +P +
Sbjct: 654 HPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHS-EHHSLLYGTNP---LDG 709
Query: 83 TKFLCQFASGEDCPIFH------GL-YDFCSMYTGASLEGAIQLNNNCC-DIAINW-SGG 133
K + G+D F GL D +++ GA ++ C ++A SG
Sbjct: 710 QKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGE 769
Query: 134 L-----------HHAKKSEASGFCYVNDIVI 153
L HHA++S A GFC+ N + I
Sbjct: 770 LKNGFAVVRPPGHHAEESTAMGFCFFNSVAI 800
>UNIPROTKB|F1N616 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
protein binding" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032703
"negative regulation of interleukin-2 production" evidence=IEA]
[GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
Length = 988
Score = 196 (74.1 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 39/91 (42%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA S A GFC+ N + IA +L + ++L +D DVHHG+G Q FY V+ +S
Sbjct: 705 HHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDWDVHHGNGTQQTFYQDPNVLYIS 764
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H++ G FFP SG + E+GA G ++VNV
Sbjct: 765 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNV 795
Score = 61 (26.5 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
++HP R+ I S +L GL + + R KAS ++ HS ++ L+ +P
Sbjct: 575 SRHPEHAGRIQSIWSRLLERGLRSQCESLRGRKASLEELQSVHSERHV-LLYGTNP 629
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 211 (79.3 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 65/212 (30%), Positives = 95/212 (44%)
Query: 19 YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDK 78
+ + HP P R+ I + GL + P A+ ++ HSAEY+ L K
Sbjct: 496 WDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMK 555
Query: 79 IHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGAS--LEGAIQLNNNCCDIAINWSGGLHH 136
E + F S CP + + TGA+ L A+ A+ G HH
Sbjct: 556 TRELHRESSNFDSIYICP---STFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPG-HH 611
Query: 137 AKKSEASGFCYVNDIVIAI--LELLKYHP-RVLYIDIDVHHGDGVQDAFYLTDRVMTVSF 193
A++ A GFC+ N + +A + + H R+L +D DVHHG+G Q F V+ VS
Sbjct: 612 AEQDAACGFCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVSL 671
Query: 194 HKYGGG-FFPCS--GDMYEIGAEGGRYYSVNV 222
H+Y G FFP G +IG G ++VNV
Sbjct: 672 HRYDHGTFFPMGDEGASSQIGRAAGTGFTVNV 703
Score = 165 (63.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 63/222 (28%), Positives = 96/222 (43%)
Query: 14 VGNFH--YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFL 71
+ FH + P P RL I ++ GL + ++ A ++ HS EYID +
Sbjct: 94 LNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLM 153
Query: 72 HTVSPDKIHEHTKFLCQFASGEDCPIFH-GLYDFCSMYTGASLE--GAI---QLNNNCCD 125
T ++E L A D H Y + +G+ L A+ ++ N
Sbjct: 154 ETTQ--YMNEGE--LRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNG--- 206
Query: 126 IAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFY 183
+AI G HHA+ S G+C N + +A + H RVL +D DVHHG G Q F
Sbjct: 207 MAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFD 265
Query: 184 LTDRVMTVSFHKYGGG-FFPC--SGDMYEIGAEGGRYYSVNV 222
V+ S H+Y G F+P + + G G+ Y++NV
Sbjct: 266 QDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINV 307
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 211 (79.3 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 65/212 (30%), Positives = 95/212 (44%)
Query: 19 YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDK 78
+ + HP P R+ I + GL + P A+ ++ HSAEY+ L K
Sbjct: 510 WDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMK 569
Query: 79 IHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGAS--LEGAIQLNNNCCDIAINWSGGLHH 136
E + F S CP + + TGA+ L A+ A+ G HH
Sbjct: 570 TRELHRESSNFDSIYICP---STFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPG-HH 625
Query: 137 AKKSEASGFCYVNDIVIAI--LELLKYHP-RVLYIDIDVHHGDGVQDAFYLTDRVMTVSF 193
A++ A GFC+ N + +A + + H R+L +D DVHHG+G Q F V+ VS
Sbjct: 626 AEQDAACGFCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVSL 685
Query: 194 HKYGGG-FFPCS--GDMYEIGAEGGRYYSVNV 222
H+Y G FFP G +IG G ++VNV
Sbjct: 686 HRYDHGTFFPMGDEGASSQIGRAAGTGFTVNV 717
Score = 165 (63.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 63/222 (28%), Positives = 96/222 (43%)
Query: 14 VGNFH--YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFL 71
+ FH + P P RL I ++ GL + ++ A ++ HS EYID +
Sbjct: 108 LNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLM 167
Query: 72 HTVSPDKIHEHTKFLCQFASGEDCPIFH-GLYDFCSMYTGASLE--GAI---QLNNNCCD 125
T ++E L A D H Y + +G+ L A+ ++ N
Sbjct: 168 ETTQ--YMNEGE--LRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNG--- 220
Query: 126 IAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFY 183
+AI G HHA+ S G+C N + +A + H RVL +D DVHHG G Q F
Sbjct: 221 MAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFD 279
Query: 184 LTDRVMTVSFHKYGGG-FFPC--SGDMYEIGAEGGRYYSVNV 222
V+ S H+Y G F+P + + G G+ Y++NV
Sbjct: 280 QDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINV 321
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 187 (70.9 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 39/92 (42%), Positives = 56/92 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA++S GFCY N + +A +LL+ ++L +D DVHHG+G Q AFY V+ +
Sbjct: 386 HHAEESTPMGFCYFNSVAVAA-KLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYM 444
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H+Y G FFP SG E+G G ++VN+
Sbjct: 445 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNM 476
Score = 68 (29.0 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 37/151 (24%), Positives = 60/151 (39%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP---D 77
+ HP R+ I S + GL K + R KA+ ++ HS + L+ +P
Sbjct: 257 SSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHT-LLYGTNPLNRQ 315
Query: 78 KIHEHTKFLCQFASG-EDCPIFHGLYDFCSMYTGASLEGAIQLNNNCC-DIAINWSGGL- 134
K+ + K L AS P D +++ GA +L C ++ + G
Sbjct: 316 KL-DSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGEL 374
Query: 135 -----------HHAKKSEASGFCYVNDIVIA 154
HHA++S GFCY N + +A
Sbjct: 375 KNGFAVVRPPGHHAEESTPMGFCYFNSVAVA 405
>UNIPROTKB|A6ND61 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HOVERGEN:HBG057112 CTD:55869 KO:K11405
EMBL:AL133500 EMBL:BX295542 UniGene:Hs.310536 DNASU:55869
GeneID:55869 KEGG:hsa:55869 HGNC:HGNC:13315 PharmGKB:PA37766
ChiTaRS:HDAC8 GenomeRNAi:55869 NextBio:61182 IPI:IPI00642258
RefSeq:NP_001159920.1 ProteinModelPortal:A6ND61 SMR:A6ND61
STRING:A6ND61 Ensembl:ENST00000373559 UCSC:uc022byv.1
ArrayExpress:A6ND61 Bgee:A6ND61 Uniprot:A6ND61
Length = 139
Score = 154 (59.3 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 134 LHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSF 193
LH + EASGFCY+ND V+ IL L + R+LY+D+D+HHGDG D V V
Sbjct: 50 LHKQMRDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGTGD-------VSDVGL 102
Query: 194 HKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPH 230
K G ++ + + + G + +YY + R +P+
Sbjct: 103 GK--GRYYSVNVPIQD-GIQDEKYYQICERYEPPAPN 136
Score = 60 (26.2 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 8 YFYNPD-VGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQ 47
Y Y+P+ V AK P R S+++SLI Y LHK+M+
Sbjct: 18 YIYSPEYVSMCDSLAKIPK---RASMVHSLIEAYALHKQMR 55
>UNIPROTKB|F1SEI2 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
Length = 122
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I L ++L +D+DVHHG+G Q AFY ++ +S
Sbjct: 13 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 72
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y++N+
Sbjct: 73 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINI 103
>UNIPROTKB|Q8WUI4 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
Pathway_Interaction_DB:ar_tf_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
Ensembl:ENST00000354334 Ensembl:ENST00000427332
Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
Length = 952
Score = 196 (74.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 39/91 (42%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA S A GFC+ N + IA +L + ++L +D DVHHG+G Q FY V+ +S
Sbjct: 669 HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYIS 728
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H++ G FFP SG + E+GA G ++VNV
Sbjct: 729 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNV 759
Score = 56 (24.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
++HP R+ I S + GL + + R KAS ++ HS ++ L+ +P
Sbjct: 539 SRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV-LLYGTNP 593
>MGI|MGI:1891835 [details] [associations]
symbol:Hdac7 "histone deacetylase 7" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007043 "cell-cell junction assembly" evidence=IMP] [GO:0007399
"nervous system development" evidence=TAS] [GO:0008134
"transcription factor binding" evidence=TAS] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=ISO] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=ISO] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
evidence=ISO] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=ISO]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:1891835
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0007399
GO:GO:0046872 GO:GO:0006954 GO:GO:0006351 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 GO:GO:0030183 GO:GO:0001570
GO:GO:0008134 GO:GO:0007043 GO:GO:0045668 GO:GO:0071889
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 HOGENOM:HOG000232065
HOVERGEN:HBG057100 CTD:51564 KO:K11408 OrthoDB:EOG4NKBV4
ChiTaRS:HDAC7 EMBL:AF207749 EMBL:AK030863 EMBL:AK036586
EMBL:AK044287 EMBL:AK088828 EMBL:AK088945 EMBL:BC057332
IPI:IPI00227380 IPI:IPI00315371 IPI:IPI00315372 IPI:IPI00315373
IPI:IPI00315375 IPI:IPI00315376 RefSeq:NP_001191204.1
RefSeq:NP_001191205.1 RefSeq:NP_001191206.1 RefSeq:NP_001191207.1
RefSeq:NP_062518.2 UniGene:Mm.384027 ProteinModelPortal:Q8C2B3
SMR:Q8C2B3 DIP:DIP-42594N IntAct:Q8C2B3 MINT:MINT-1551781
STRING:Q8C2B3 PhosphoSite:Q8C2B3 PaxDb:Q8C2B3 PRIDE:Q8C2B3
Ensembl:ENSMUST00000079838 Ensembl:ENSMUST00000088402
Ensembl:ENSMUST00000116408 Ensembl:ENSMUST00000116409
Ensembl:ENSMUST00000118294 GeneID:56233 KEGG:mmu:56233
UCSC:uc007xld.1 UCSC:uc007xle.1 UCSC:uc007xlf.1 UCSC:uc007xlg.1
UCSC:uc007xlh.1 UCSC:uc007xlj.1 OMA:AFRIVVM BindingDB:Q8C2B3
ChEMBL:CHEMBL4219 NextBio:312136 PMAP-CutDB:Q8C2B3 Bgee:Q8C2B3
CleanEx:MM_HDAC7 Genevestigator:Q8C2B3
GermOnline:ENSMUSG00000022475 Uniprot:Q8C2B3
Length = 938
Score = 194 (73.4 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 38/91 (41%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA S A GFC+ N + IA +L ++ ++L +D DVHHG+G Q FY V+ +S
Sbjct: 656 HHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQQTFYQDPSVLYIS 715
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H++ G FFP SG + E+G G ++VNV
Sbjct: 716 LHRHDDGNFFPGSGAVDEVGTGSGEGFNVNV 746
Score = 59 (25.8 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
+KHP R+ I S + GL + + R KAS ++ HS ++ L+ +P
Sbjct: 526 SKHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV-LLYGTNP 580
>UNIPROTKB|J3KPH8 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
Length = 1014
Score = 196 (74.1 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 39/91 (42%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA S A GFC+ N + IA +L + ++L +D DVHHG+G Q FY V+ +S
Sbjct: 725 HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYIS 784
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H++ G FFP SG + E+GA G ++VNV
Sbjct: 785 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNV 815
Score = 56 (24.8 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
++HP R+ I S + GL + + R KAS ++ HS ++ L+ +P
Sbjct: 595 SRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV-LLYGTNP 649
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 206 (77.6 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 64/208 (30%), Positives = 96/208 (46%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEH 82
HP P R+ I + GL + I A ++ HSAEY++ L T K +
Sbjct: 499 HPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHSAEYVEHLRTTEKMKTRDL 558
Query: 83 TKFLCQFASGEDCPIFHGLYDFCSMYTGAS--LEGAIQLNNNCCDIAINWSGGLHHAKKS 140
+ F S CP + + TGA+ L A+ IA+ G HHA+ +
Sbjct: 559 HREGANFDSIYICP---STFACAKLATGAACRLVEAVLSGEVLNGIAVVRPPG-HHAEPN 614
Query: 141 EASGFCYVNDIVIAI--LELLKYHP-RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYG 197
A GFC+ N + +A +++ R+L +D DVHHG+G Q F V+ VS H+Y
Sbjct: 615 AACGFCFFNSVAVAARHAQIIAGRALRILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYD 674
Query: 198 GG-FFPCS--GDMYEIGAEGGRYYSVNV 222
G FFP G ++G + G ++VNV
Sbjct: 675 RGTFFPMGDEGASSQVGRDAGIGFTVNV 702
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 65/227 (28%), Positives = 101/227 (44%)
Query: 10 YNPDVGNFH--YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEY 67
++ + +FH + P P RL I ++ GL + ++ A ++ HS EY
Sbjct: 89 FDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQARFAEKEELMLVHSLEY 148
Query: 68 IDFLHTVSPDKIHEHTKFLCQFASGEDCPIFH-GLYDFCSMYTGA------SLEGAIQLN 120
ID + T ++E L A D H Y + TG+ +L GA ++
Sbjct: 149 IDLMETTQ--YMNEGE--LRVLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGA-EIR 203
Query: 121 NNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGV 178
N +A+ G HHA+ + G+C N + +A K H RVL +D DVHHG G
Sbjct: 204 NG---MAVIRPPG-HHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGT 259
Query: 179 QDAFYLTDRVMTVSFHKYGGG-FFPC--SGDMYEIGAEGGRYYSVNV 222
Q F V+ S H+Y G F+P + + IG G+ Y++NV
Sbjct: 260 QFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINV 306
>UNIPROTKB|P56524 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0030183 "B cell
differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
"regulation of protein binding" evidence=IMP] [GO:0030955
"potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
"response to denervation involved in regulation of muscle
adaptation" evidence=ISS] [GO:0045820 "negative regulation of
glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0033613 "activating transcription
factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
GO:GO:0010882 Uniprot:P56524
Length = 1084
Score = 187 (70.9 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 39/92 (42%), Positives = 56/92 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA++S GFCY N + +A +LL+ ++L +D DVHHG+G Q AFY V+ +
Sbjct: 802 HHAEESTPMGFCYFNSVAVAA-KLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYM 860
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H+Y G FFP SG E+G G ++VN+
Sbjct: 861 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNM 892
Score = 68 (29.0 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 37/151 (24%), Positives = 60/151 (39%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP---D 77
+ HP R+ I S + GL K + R KA+ ++ HS + L+ +P
Sbjct: 673 SSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHT-LLYGTNPLNRQ 731
Query: 78 KIHEHTKFLCQFASG-EDCPIFHGLYDFCSMYTGASLEGAIQLNNNCC-DIAINWSGGL- 134
K+ + K L AS P D +++ GA +L C ++ + G
Sbjct: 732 KL-DSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGEL 790
Query: 135 -----------HHAKKSEASGFCYVNDIVIA 154
HHA++S GFCY N + +A
Sbjct: 791 KNGFAVVRPPGHHAEESTPMGFCYFNSVAVA 821
>UNIPROTKB|F1PK81 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090050 "positive regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0032703 "negative regulation of interleukin-2 production"
evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
"protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
Length = 951
Score = 193 (73.0 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 39/91 (42%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA S A GFC+ N + IA +L + ++L +D DVHHG+G Q FY V+ +S
Sbjct: 668 HHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIMDWDVHHGNGTQQTFYQDPSVLYIS 727
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H++ G FFP SG + E+GA G ++VNV
Sbjct: 728 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNV 758
Score = 56 (24.8 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
++HP R+ I S + GL + + R KAS ++ HS ++ L+ +P
Sbjct: 538 SRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV-LLYGTNP 592
>UNIPROTKB|E5RJ04 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00964796 ProteinModelPortal:E5RJ04 SMR:E5RJ04
Ensembl:ENST00000523240 ArrayExpress:E5RJ04 Bgee:E5RJ04
Uniprot:E5RJ04
Length = 65
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 31/65 (47%), Positives = 51/65 (78%)
Query: 25 MKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTK 84
MKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++HS EYI FL ++ PD + E++K
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
Query: 85 FLCQF 89
+ +F
Sbjct: 61 QMQRF 65
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 203 (76.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 59/211 (27%), Positives = 101/211 (47%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV---SPDKI 79
HP +P R+ I+ + YGL K+M+ P A+ ++C H+ +++ + + P ++
Sbjct: 563 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 622
Query: 80 HEHTKFLCQFASGEDCPIF-HG-LYDFCSMYTGASLEGAIQ-LNNNCCDIAINWSGGLHH 136
H+ A+G ++ H +D ++ G L+ L N HH
Sbjct: 623 HD--------AAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHH 674
Query: 137 AKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFH 194
A++ GFC N++ IA ++ RVL +D DVHHG+G Q F +V+ +S H
Sbjct: 675 AEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLH 734
Query: 195 KYG-GGFFPCS--GDMYEIGAEGGRYYSVNV 222
+Y G FFP G+ +G GR ++VN+
Sbjct: 735 RYEHGSFFPKGPDGNFDVVGKGAGRGFNVNI 765
Score = 188 (71.2 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 54/177 (30%), Positives = 87/177 (49%)
Query: 54 ASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFH-GLYDFCSMYTGAS 112
A+ ++ R H+ E+ + L S + E + + +S D H ++ + +G++
Sbjct: 166 ATKDEILRLHTEEHFERLKETSGIRDDERME---ELSSRYDSIYIHPSTFELSLLASGST 222
Query: 113 LEGAIQLNNNCCD--IAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYI 168
+E L +AI G HHA K+E +G+C+ N++ +A L H R+L I
Sbjct: 223 IELVDHLVAGKAQNGMAIIRPPG-HHAMKAEYNGYCFFNNVALATQHALDVHKLQRILII 281
Query: 169 DIDVHHGDGVQDAFYLTDRVMTVSFHKYG-GGFFPC--SGDMYEIGAEGGRYYSVNV 222
D DVHHG G Q FY RV+ S H++ G F+P D + IG+ G Y+ NV
Sbjct: 282 DYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNV 338
>UNIPROTKB|E5RFI6 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00976946 ProteinModelPortal:E5RFI6 SMR:E5RFI6
Ensembl:ENST00000520895 ArrayExpress:E5RFI6 Bgee:E5RFI6
Uniprot:E5RFI6
Length = 60
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 30/60 (50%), Positives = 48/60 (80%)
Query: 25 MKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTK 84
MKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++HS EYI FL ++ PD + E++K
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 202 (76.2 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 63/216 (29%), Positives = 96/216 (44%)
Query: 18 HYG---AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
HY + HP P R+ I + GL + A+ ++ HSAEY+ +
Sbjct: 501 HYNLWDSHHPEMPQRILRIMRRLEELGLAGRCLALPARPATDAELLACHSAEYVSRIRAT 560
Query: 75 SPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGAS--LEGAIQLNNNCCDIAINWSG 132
+ E + + S CP G + + GA+ L A+ IA+
Sbjct: 561 EKMRTRELHREGANYDSIYICP---GTFACAQLAAGAACRLVEAVLAGEVLNGIAVVRPP 617
Query: 133 GLHHAKKSEASGFCYVNDIVIAI--LELLKYHP-RVLYIDIDVHHGDGVQDAFYLTDRVM 189
G HHA++ A GFC+ N + +A + + H R+L +D DVHHG+G Q F V+
Sbjct: 618 G-HHAERDSACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHLFEEDPSVL 676
Query: 190 TVSFHKYGGG-FFPCS--GDMYEIGAEGGRYYSVNV 222
+S H+Y G FFP G +IG G ++VNV
Sbjct: 677 YISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNV 712
Score = 164 (62.8 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 63/222 (28%), Positives = 96/222 (43%)
Query: 14 VGNFH--YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFL 71
+ FH + P P RL I ++ GL + ++ A ++ HS EYID +
Sbjct: 104 LNEFHCLWDDSFPEGPERLHAIKEQLMQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLM 163
Query: 72 HTVSPDKIHEHTKFLCQFASGEDCPIFH-GLYDFCSMYTGASLE--GAI---QLNNNCCD 125
T ++E L A D H Y + +G+ L A+ ++ N
Sbjct: 164 ETTQ--YMNEGE--LRVLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEIRNG--- 216
Query: 126 IAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFY 183
+AI G HHA+ S G+C N + +A + H RVL +D DVHHG G Q F
Sbjct: 217 MAIIRPPG-HHAQHSLMDGYCMFNHVALAARYAQQKHDVQRVLIVDWDVHHGQGTQFTFD 275
Query: 184 LTDRVMTVSFHKYGGG-FFPC--SGDMYEIGAEGGRYYSVNV 222
V+ S H+Y G F+P + + G G+ Y++NV
Sbjct: 276 QDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINV 317
>TIGR_CMR|SPO_A0096 [details] [associations]
symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
Length = 344
Score = 194 (73.4 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 67/219 (30%), Positives = 99/219 (45%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIH 80
A H P SL+ GL ++ + + DM R HS Y+D T+S D
Sbjct: 13 AGHAESPESKRRFKSLMDVSGLTAQLSVQSAEPVTETDMARVHSEAYLDRFKTLS-DAGG 71
Query: 81 EHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCD--IAINWSGGLHHAK 138
+ +GE P G Y+ ++ G + + D A++ G HHA
Sbjct: 72 GN--------AGEFSPFGSGSYEIAALSAGLVKRAVFDVVDGTFDNAYALSRPPG-HHAM 122
Query: 139 KSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHK 195
+ + GFC + +I IAI E + RV +D DVHHG+G QD FY + V+T+S H+
Sbjct: 123 RDGSMGFCLLANIAIAI-EAARAERGLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIHQ 181
Query: 196 YGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHK 234
F P SG E GA G ++NV +L P + H+
Sbjct: 182 ENC-FPPGSGSGSERGAGAGEGANLNV---NLLPGAGHQ 216
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 199 (75.1 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 49/187 (26%), Positives = 98/187 (52%)
Query: 53 KASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGAS 112
+A+ ++ + HS +++ F+ + D + + L + +G+ + + Y + G +
Sbjct: 186 EATSEEILQVHSEDHLKFIQSTE-DMSRD--QLLKETETGDSIYVNNDSYLSAKLSCGGT 242
Query: 113 LEG--AIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP----RVL 166
+E A+ +AI G HHA+ + +GFC +++ +A +LK +P R++
Sbjct: 243 IEACKAVIEGRVKNSLAIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIV 301
Query: 167 YIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG-FFPCS--GDMYEIGAEGGRYYSVNVR 223
+D D+HHG+G Q AFY RV+ +S H++ G F+P + GD+ ++G G +++N+
Sbjct: 302 IVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIP 361
Query: 224 NRDLSPH 230
R H
Sbjct: 362 WRSSGMH 368
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 199 (75.1 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 49/187 (26%), Positives = 98/187 (52%)
Query: 53 KASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGAS 112
+A+ ++ + HS +++ F+ + D + + L + +G+ + + Y + G +
Sbjct: 186 EATSEEILQVHSEDHLKFIQSTE-DMSRD--QLLKETETGDSIYVNNDSYLSAKLSCGGT 242
Query: 113 LEG--AIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP----RVL 166
+E A+ +AI G HHA+ + +GFC +++ +A +LK +P R++
Sbjct: 243 IEACKAVIEGRVKNSLAIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIV 301
Query: 167 YIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG-FFPCS--GDMYEIGAEGGRYYSVNVR 223
+D D+HHG+G Q AFY RV+ +S H++ G F+P + GD+ ++G G +++N+
Sbjct: 302 IVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIP 361
Query: 224 NRDLSPH 230
R H
Sbjct: 362 WRSSGMH 368
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 199 (75.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/208 (30%), Positives = 93/208 (44%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEH 82
HP P R+ I + GL + I A ++ HSAEY++ L K +
Sbjct: 502 HPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHSAEYVERLRATEKMKTRDL 561
Query: 83 TKFLCQFASGEDCPIFHGLYDFCSMYTGAS--LEGAIQLNNNCCDIAINWSGGLHHAKKS 140
+ F S CP + + TGA+ L A+ IAI G HHA+
Sbjct: 562 HREGANFESIYICP---STFACAQLATGAACRLVEAVLSGEVLNGIAIVRPPG-HHAEPD 617
Query: 141 EASGFCYVNDIVIAI--LELLKYHP-RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYG 197
A GFC+ N + +A +++ R+L +D DVHHG+G Q F V+ VS H+Y
Sbjct: 618 AACGFCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFEEDPSVLYVSLHRYD 677
Query: 198 GG-FFPCS--GDMYEIGAEGGRYYSVNV 222
G FFP G ++G G ++VNV
Sbjct: 678 RGTFFPMGDEGASSQVGRAAGTGFTVNV 705
Score = 176 (67.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 62/223 (27%), Positives = 97/223 (43%)
Query: 10 YNPDVGNFH--YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEY 67
++ + +FH + P P RL I ++ GL + ++ A ++ HS EY
Sbjct: 89 FDEQLNDFHCLWDDSFPENPERLHAIKEQLILEGLLGRCVSFQARFAEKEELMLVHSLEY 148
Query: 68 IDFLHTVSPDKIHEHTKFLCQFASGEDCPIFH-GLYDFCSMYTGASLE--GAIQLNNNCC 124
ID + T ++E L A D H Y + TG+ L A+
Sbjct: 149 IDLMETTQ--YMNEGE--LRVLAGTYDSVYLHPNSYSCACLATGSVLRLVDAVMGAEIRN 204
Query: 125 DIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAF 182
+A+ G HHA++S G+C N + +A K H R+L +D DVHHG G Q F
Sbjct: 205 GMAVIRPPG-HHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDWDVHHGQGTQFIF 263
Query: 183 YLTDRVMTVSFHKYGGG-FFPC--SGDMYEIGAEGGRYYSVNV 222
V+ S H+Y G F+P + + G G+ Y++NV
Sbjct: 264 DQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINV 306
>UNIPROTKB|F1NP26 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
Uniprot:F1NP26
Length = 1062
Score = 192 (72.6 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 40/92 (43%), Positives = 56/92 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA++S GFCY N + IA +LL+ ++L +D DVHHG+G Q AFY V+ +
Sbjct: 780 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 838
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H+Y G FFP SG E+G G ++VN+
Sbjct: 839 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNM 870
Score = 47 (21.6 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
HP R+ I S + GL K + R KA+ ++ HS + L+ +P
Sbjct: 649 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHT-LLYGTNP 701
>UNIPROTKB|Q4KBB7 [details] [associations]
symbol:PFL_3361 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
OMA:PGSYEIA ProtClustDB:CLSK868223
BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
Length = 377
Score = 193 (73.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 64/229 (27%), Positives = 100/229 (43%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIH 80
A H P + SL+ GL +++ + A+ D+ R HSA Y+ +S D
Sbjct: 41 AGHAESPETKRRLKSLMDVSGLTRQLHLRSAAAATEDDLLRVHSAAYLQRFKALS-DAGG 99
Query: 81 EHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGL-HHAKK 139
H G++ P+ G Y+ + G ++ + + D A + S HH +
Sbjct: 100 GHL--------GDEAPVGPGSYEIAQLSAGLAMAAVDAVLSGEADNAYSLSRPPGHHCTR 151
Query: 140 SEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYG 197
+A GFC++ +I IAI H +V ID DVHHG+G Q F V+T+S H+
Sbjct: 152 DQAMGFCFLANIAIAIEAAKARHGLGKVAVIDWDVHHGNGTQSIFEERADVLTLSLHQ-D 210
Query: 198 GGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHSLLP 246
G F P G + G G ++N+ L P S H H ++P
Sbjct: 211 GCFPPGYGGEQDRGRGAGLGCNINI---PLLPGSGHDAYLYAMQHIVIP 256
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 198 (74.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 60/216 (27%), Positives = 98/216 (45%)
Query: 17 FH--YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTV 74
FH + A HP P R+S + ++ GL + + ++ H+ EY++ + +
Sbjct: 74 FHCLWDASHPECPARVSTVMEMLETEGLLGRCVQVEARAVTEDELLLVHTKEYVELMKST 133
Query: 75 SPDKIHEHTKFLCQFASGEDCPIFH-GLYDFCSMYTGASLE--GAIQLNNNCCDIAINWS 131
+ E K L A D H G + + G+ L+ + + +IN
Sbjct: 134 Q-NMTEEELKTL---AEKYDSVYLHPGFFSSACLSVGSVLQLVDKVMTSQLRNGFSINRP 189
Query: 132 GGLHHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVM 189
G HHA+ + +GFC N++ IA K H RVL +D DVHHG G+Q F V+
Sbjct: 190 PG-HHAQADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDVHHGQGIQYIFEEDPSVL 248
Query: 190 TVSFHKY-GGGFFPC--SGDMYEIGAEGGRYYSVNV 222
S H+Y G F+P D +G+ G+ Y++N+
Sbjct: 249 YFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINL 284
Score = 183 (69.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 65/216 (30%), Positives = 99/216 (45%)
Query: 19 YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHT---VS 75
+ + HP P R+S I S L + A+ ++ HS+++I + + +
Sbjct: 459 WDSHHPELPQRISRIFSRHEELRLLSRCHRIPARLATEEELALCHSSKHISIIKSSEHMK 518
Query: 76 PDKIHE-HTKFLCQFASGED--CPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSG 132
P ++ ++ F S E C + C A L G Q+ N +AI
Sbjct: 519 PRDLNRLGDEYNSIFISNESYTCALLAA--GSCFNSAQAILTG--QVRNA---VAIVRPP 571
Query: 133 GLHHAKKSEASGFCYVNDIVIAIL---ELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVM 189
G HHA+K A GFC+ N + + + RVL +D DVHHG+G Q F D V+
Sbjct: 572 G-HHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVL 630
Query: 190 TVSFHKY-GGGFFPCSGDM-YE-IGAEGGRYYSVNV 222
+S H+Y G FFP S D Y+ +G GR Y+VN+
Sbjct: 631 YISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNI 666
>UNIPROTKB|H9KZE7 [details] [associations]
symbol:H9KZE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007043 "cell-cell
junction assembly" evidence=IEA] [GO:0032703 "negative regulation
of interleukin-2 production" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0071889
"14-3-3 protein binding" evidence=IEA] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AADN02072408
EMBL:AADN02072409 EMBL:AADN02072410 Ensembl:ENSGALT00000010204
Uniprot:H9KZE7
Length = 951
Score = 187 (70.9 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 38/91 (41%), Positives = 54/91 (59%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA S A GFC+ N + IA +L + ++L +D DVHHG+G Q FY V+ +S
Sbjct: 668 HHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYIS 727
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H++ G FFP SG E+GA G ++VN+
Sbjct: 728 LHRHDDGNFFPGSGAADEVGAGPGEGFNVNI 758
Score = 52 (23.4 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
+ HP R+ I S + GL + + R KA+ ++ H+ ++ FL+ +P
Sbjct: 538 SNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHV-FLYGTNP 592
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 197 (74.4 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 64/223 (28%), Positives = 100/223 (44%)
Query: 10 YNPDV-GNFH-YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEY 67
Y+P + G+++ + HP P R+ I + GL + A+ ++ HSAEY
Sbjct: 498 YDPAMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHSAEY 557
Query: 68 IDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGA--SLEGAIQLNNNCCD 125
+ L K E + F S CP + + TG+ L A+
Sbjct: 558 VGRLRATEKMKTRELHREGSNFDSIYICP---STFACAQLATGSVCRLVEAVLAREVLNG 614
Query: 126 IAINWSGGLHHAKKSEASGFCYVNDIVIAI--LELLKYHP-RVLYIDIDVHHGDGVQDAF 182
A+ G HHA++ A GFC+ N + +A + + H R+L +D DVHHG+G Q F
Sbjct: 615 TAVVRPPG-HHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIF 673
Query: 183 YLTDRVMTVSFHKYGGG-FFPCS--GDMYEIGAEGGRYYSVNV 222
V+ +S H+Y G FFP G ++G G ++VNV
Sbjct: 674 EEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNV 716
Score = 179 (68.1 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 64/223 (28%), Positives = 97/223 (43%)
Query: 10 YNPDVGNFH--YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEY 67
++ + FH + P P RL I ++ GL + ++ A ++ HS EY
Sbjct: 104 FDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQDGLLDRCVSFQARFAEKEELMLVHSLEY 163
Query: 68 IDFLHTVSPDKIHEHTKFLCQFASGEDCPIFH-GLYDFCSMYTGASLE--GAIQLNNNCC 124
ID + T ++E L A D H Y + +G+ L A+ N
Sbjct: 164 IDLMETTQ--YMNEGE--LRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLRNEIRN 219
Query: 125 DIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAF 182
+AI G HHA+ S G+C N + +A + H RVL +D DVHHG G Q F
Sbjct: 220 GMAIVRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDWDVHHGQGTQFTF 278
Query: 183 YLTDRVMTVSFHKYGGG-FFPC--SGDMYEIGAEGGRYYSVNV 222
V+ S H+Y G F+P + + IG G+ Y++NV
Sbjct: 279 DQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINV 321
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 195 (73.7 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 41/92 (44%), Positives = 56/92 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA++S GFCY N + IA +LL+ + L +D DVHHG+G Q AFY RV+ +
Sbjct: 802 HHAEESTPMGFCYFNSVAIAA-KLLQQRLSVSKTLVVDWDVHHGNGTQQAFYSDPRVLYI 860
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H+Y G FFP SG E+G G ++VN+
Sbjct: 861 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNM 892
>UNIPROTKB|F1LQG9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
Uniprot:F1LQG9
Length = 826
Score = 193 (73.0 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIA--ILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I +L+ +VL +D D+HHG+G Q AFY V+ +S
Sbjct: 536 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 595
Query: 193 FHKY-GGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y+VNV
Sbjct: 596 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNV 626
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 194 (73.4 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA++S A GFC+ N + I L ++L +D+DVHHG+G Q AFY ++ +S
Sbjct: 784 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 843
Query: 193 FHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
H+Y G FFP SG E+G G Y++N+
Sbjct: 844 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINI 874
>TIGR_CMR|SPO_2002 [details] [associations]
symbol:SPO_2002 "acetylpolyamine aminohydrolase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
Length = 341
Score = 172 (65.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 45/130 (34%), Positives = 64/130 (49%)
Query: 95 CPIFHGLYDFCSMYTGASLEGA-IQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVI 153
CPI G ++ +++ GA + + ++ G HHA A GFC++N+ I
Sbjct: 117 CPIAEGTWEAAYWSAQSAITGADLIIQGERSAYVLSRPPG-HHAFGDLAGGFCFLNNSAI 175
Query: 154 AILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCS-GDMYEIGA 212
A L R +DIDVHHG+G Q FY D V+TVS H F+P G E GA
Sbjct: 176 AAERLRAAGLRPAILDIDVHHGNGTQGIFYERDDVLTVSIHADPARFYPFFWGHAQERGA 235
Query: 213 EGGRYYSVNV 222
G Y++N+
Sbjct: 236 GRGLGYNLNL 245
Score = 49 (22.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYR-PYKASYHDMCRFHSAEYIDFLHTV 74
+P +P R+ V+ + G ++ P A + HS EY+ FL T+
Sbjct: 26 NPEQPRRIEVLRA-----GAEAAGCVFAAPGDAGLGPIAALHSPEYLTFLQTI 73
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 190 (71.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 67/231 (29%), Positives = 111/231 (48%)
Query: 26 KPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLH-TVSPDKIHEHTK 84
+P RL+ + GL ++ P +AS ++ HS EY+ L T + D T+
Sbjct: 27 RPERLTAALRRLQQGGLEQRCLQLAPREASEAELGLVHSPEYVSLLRGTQALD-----TQ 81
Query: 85 FLCQFASGEDCPIFHGLYDFCS-MYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSE 141
L + D FH C+ + GA+L+ A+ + +A+ G HH++++
Sbjct: 82 ELRALSGQYDAVYFHPSTFHCARLAVGAALQLVDAVLMGAVHNGLALVRPPG-HHSQRAA 140
Query: 142 ASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG 199
A+GFC N++ IA + H R+L +D DVHHG G+Q F V+ S+H+Y G
Sbjct: 141 ANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHG 200
Query: 200 -FFPC--SGDMYEIGAEGGRYYSVNVR-NRDLSPHSSHKRMFRERVHSLLP 246
F+P D +G GR ++VN+ N+ ++ + F +H LLP
Sbjct: 201 RFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAF---LHVLLP 248
>UNIPROTKB|F1NES1 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
Uniprot:F1NES1
Length = 1054
Score = 192 (72.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 40/92 (43%), Positives = 56/92 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA++S GFCY N + IA +LL+ ++L +D DVHHG+G Q AFY V+ +
Sbjct: 772 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 830
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H+Y G FFP SG E+G G ++VN+
Sbjct: 831 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNM 862
>UNIPROTKB|F1NWX8 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
of cardiac muscle contraction by calcium ion signaling"
evidence=IEA] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
"regulation of protein binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
Length = 1071
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 40/92 (43%), Positives = 56/92 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA++S GFCY N + IA +LL+ ++L +D DVHHG+G Q AFY V+ +
Sbjct: 789 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 847
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H+Y G FFP SG E+G G ++VN+
Sbjct: 848 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNM 879
>UNIPROTKB|P83038 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0008134 "transcription factor binding" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
Uniprot:P83038
Length = 1080
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 40/92 (43%), Positives = 56/92 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA++S GFCY N + IA +LL+ ++L +D DVHHG+G Q AFY V+ +
Sbjct: 798 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 856
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H+Y G FFP SG E+G G ++VN+
Sbjct: 857 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNM 888
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 188 (71.2 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 63/229 (27%), Positives = 109/229 (47%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P RL+V + +GL ++ + +A+ ++ HS EY++ + + E L
Sbjct: 83 PERLTVSYEALRTHGLAQRCKAVPVRQATEQEILLAHSEEYLEAVKQTPGMNVEE----L 138
Query: 87 CQFASGEDCPIFH-GLYDFCSMYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSEAS 143
F+ + FH +Y + GA+L+ ++ +A+ G HH+++S A+
Sbjct: 139 MAFSKKYNDVYFHQNIYHCAKLAAGATLQLVDSVMKREVRNGMALVRPPG-HHSQRSAAN 197
Query: 144 GFCYVNDIVIAILELLK-YH-PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGG-GF 200
GFC N++ IA L K Y+ R+L +D DVHHG G+Q F V+ S+H+Y F
Sbjct: 198 GFCVFNNVAIAALYAKKNYNLNRILIVDWDVHHGQGIQYCFEEDPSVLYFSWHRYEHQSF 257
Query: 201 FPC--SGDMYEIGAEGGRYYSVNVR-NRDLSPHSSHKRMFRERVHSLLP 246
+P D +G G +++N+ N+ +S + F H LLP
Sbjct: 258 WPNLPESDYSSVGKGKGSGFNINLPWNKVGMTNSDYLAAF---FHVLLP 303
>UNIPROTKB|E5RK19 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00976604 ProteinModelPortal:E5RK19 SMR:E5RK19
Ensembl:ENST00000524334 ArrayExpress:E5RK19 Bgee:E5RK19
Uniprot:E5RK19
Length = 52
Score = 165 (63.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 27/52 (51%), Positives = 42/52 (80%)
Query: 25 MKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
MKPHR+ + ++L+L YGL++KM+IYRP+KA+ +M ++HS EYI FL ++ P
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRP 52
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 40/92 (43%), Positives = 56/92 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA++S GFCY N + IA +LL+ ++L +D DVHHG+G Q AFY V+ +
Sbjct: 741 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYL 799
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H+Y G FFP SG E+G G ++VN+
Sbjct: 800 SLHRYDDGNFFPGSGAPDEVGIGPGVGFNVNM 831
>RGD|619979 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA;ISO] [GO:0010882
"regulation of cardiac muscle contraction by calcium ion signaling"
evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
"histone deacetylation" evidence=ISO;IMP] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
"potassium ion binding" evidence=IEA;ISO] [GO:0031594
"neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0033613
"activating transcription factor binding" evidence=IEA;ISO]
[GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0042641
"actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043393 "regulation of protein binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
of skeletal muscle fiber development" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
[GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
[GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
"histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
Genevestigator:Q99P99 Uniprot:Q99P99
Length = 1077
Score = 188 (71.2 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 40/92 (43%), Positives = 56/92 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA++S GFCY N + IA +LL+ ++L +D DVHHG+G Q AFY V+ +
Sbjct: 795 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYM 853
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H+Y G FFP SG E+G G ++VN+
Sbjct: 854 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNM 885
>UNIPROTKB|Q4K950 [details] [associations]
symbol:aphA_2 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WSAQSAV HOGENOM:HOG000225182
RefSeq:YP_261233.1 ProteinModelPortal:Q4K950 STRING:Q4K950
GeneID:3476184 KEGG:pfl:PFL_4136 PATRIC:19877677
ProtClustDB:CLSK920945 BioCyc:PFLU220664:GIX8-4171-MONOMER
Uniprot:Q4K950
Length = 341
Score = 180 (68.4 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 46/138 (33%), Positives = 67/138 (48%)
Query: 87 CQFASGEDCPIFHGLYDFCSMYTGASLEGA-IQLNNNCCDIAINWSGGLHHAKKSEASGF 145
C A G CP+ + +++ GA L+ A+ G HHA+ A GF
Sbjct: 109 CYLADGS-CPVGESTWRAAYWSAQSAVAGAQALLDGEPAAYALCRPPG-HHARSEAAGGF 166
Query: 146 CYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFP-CS 204
CY+N+ IA L + RV +D D+HHG G+Q+ FY V+ VS H F+P +
Sbjct: 167 CYLNNAAIAAQVLRDKYARVAVLDTDMHHGQGIQEIFYERADVLYVSVHGDPTNFYPGVA 226
Query: 205 GDMYEIGAEGGRYYSVNV 222
G E GA G Y++N+
Sbjct: 227 GFAEERGAGAGEGYNLNL 244
>MGI|MGI:3036234 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IGI] [GO:0004407
"histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
[GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP;IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
"protein complex" evidence=ISO] [GO:0043393 "regulation of protein
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045820 "negative regulation of
glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070555 "response
to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
Uniprot:Q6NZM9
Length = 1076
Score = 187 (70.9 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 39/92 (42%), Positives = 56/92 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA++S GFCY N + +A +LL+ ++L +D DVHHG+G Q AFY V+ +
Sbjct: 794 HHAEESTPMGFCYFNSVAVAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYM 852
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H+Y G FFP SG E+G G ++VN+
Sbjct: 853 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNM 884
>UNIPROTKB|F1PRU6 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
Length = 1084
Score = 187 (70.9 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 40/92 (43%), Positives = 55/92 (59%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH---PRVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA++S GFCY N + IA +LL+ + L +D DVHHG+G Q AFY V+ +
Sbjct: 801 HHAEESTPMGFCYFNSVAIAA-KLLQQRLDVSKTLIVDWDVHHGNGTQQAFYNDPNVLYI 859
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H+Y G FFP SG E+G G ++VN+
Sbjct: 860 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNM 891
>RGD|1305874 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0014003 "oligodendrocyte development"
evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
Length = 588
Score = 183 (69.5 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 68/230 (29%), Positives = 108/230 (46%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLH-TVSPDKIHEHTKF 85
P RL+ + GL ++ Q +AS ++ HS EYI + T + DK HT
Sbjct: 28 PERLTAALDGLRQRGLEERCQCLSVCEASEEELGLVHSPEYIALVQKTQTLDKEELHT-- 85
Query: 86 LCQFASGEDCPIFHGLYDFCS-MYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSEA 142
+ D FH C+ + GA+L A+ +A+ G HH++++ A
Sbjct: 86 ---LSKQYDAVYFHPDTFHCARLAAGAALRLVDAVLTGAVHNGVALVRPPG-HHSQRAAA 141
Query: 143 SGFCYVNDIVIAILELL-KYH-PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYG-GG 199
+GFC N++ IA KY R+L +D DVHHG G+Q F V+ S+H+Y G
Sbjct: 142 NGFCVFNNVAIAARHAKQKYGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGN 201
Query: 200 FFPC--SGDMYEIGAEGGRYYSVNVR-NRDLSPHSSHKRMFRERVHSLLP 246
F+P D +G G+ ++VN+ N+ ++ + F +H LLP
Sbjct: 202 FWPFLPESDADTVGRGRGQGFTVNLPWNQVGMGNADYLAAF---LHVLLP 248
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 183 (69.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 57/227 (25%), Positives = 107/227 (47%)
Query: 17 FHYGAKHPMKPHRLSVINSLILGYGLHKK-----------MQIYRPYKASY-HDMCRFHS 64
F Y HP P R+ I ++ GL + + P +A+ ++ H+
Sbjct: 77 FEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEVHT 136
Query: 65 AEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEG--AIQLNNN 122
E+++F+ S +K+ + L + G+ + Y + G ++E A+
Sbjct: 137 KEHLEFIE--STEKMSRE-ELLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEGRV 193
Query: 123 CCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP----RVLYIDIDVHHGDGV 178
+A+ G HHA+ A GFC +++ +A +LK +P R++ +D D+HHG+G
Sbjct: 194 KNSLAVVRPPG-HHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGT 252
Query: 179 QDAFYLTDRVMTVSFHKYG-GGFFPCS-GDMYEIGAEG-GRYYSVNV 222
Q +FY D+V+ VS H++ G ++P + Y+ EG G ++ N+
Sbjct: 253 QKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNI 299
>UNIPROTKB|E1BQQ2 [details] [associations]
symbol:Gga.27678 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
Length = 218
Score = 160 (61.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P RLS + Y L ++ + S ++ HS+E+++ S ++E L
Sbjct: 30 PERLSASYEQLQCYHLVERCVPVPAREGSEEEILLVHSSEHLEAAK--STQTMNEEE--L 85
Query: 87 CQFASGEDCPIFH-GLYDFCSMYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSEAS 143
+ + D FH Y + GA+L+ ++ C +A+ G HH++++ A+
Sbjct: 86 KRISGNYDSFFFHPNTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPG-HHSQRNAAN 144
Query: 144 GFCYVNDIVIAI-LELLKYH-PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKY 196
GFC N++ IA LKY R+L +D DVHHG G Q F V+ S+H+Y
Sbjct: 145 GFCLFNNVAIAAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDPSVLYFSWHRY 199
>FB|FBgn0041210 [details] [associations]
symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
Bgee:Q8I9J6 Uniprot:Q8I9J6
Length = 1255
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 38/92 (41%), Positives = 56/92 (60%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP---RVLYIDIDVHHGDGVQDAFYLTDRVMTV 191
HHA+ + A GFC+ N I IA L + P R+L +D DVHHG+G Q AFY + ++ +
Sbjct: 970 HHAEANLAMGFCFFNSIAIAAKLLRQRMPEVRRILIVDWDVHHGNGTQQAFYQSPDILYL 1029
Query: 192 SFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
S H++ G FFP +G E G+ G ++VN+
Sbjct: 1030 SIHRHDDGNFFPGTGGPTECGSGAGLGFNVNI 1061
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 183 (69.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 60/209 (28%), Positives = 94/209 (44%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDM-CRFHSAEYIDFLHTVSPDKIHE 81
HP P R+ I + GL K+ A+ ++ C HSAE+++ L K E
Sbjct: 501 HPEMPQRIHFIMHHLDELGLAKRCHSLPARPATDAELLC--HSAEHLERLRATEKMKTRE 558
Query: 82 HTKFLCQFASGEDCPIFHGLYDFCSMYTGAS--LEGAIQLNNNCCDIAINWSGGLHHAKK 139
+ + A+ + I + + GA+ L A+ +A+ G HHA+
Sbjct: 559 LRR---EGANYDSIYICSSTFACAQLAAGAACRLVEAVLAGEVLNGVAVVRPPG-HHAEP 614
Query: 140 SEASGFCYVNDIVIAI--LELLKYHP-RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKY 196
A GFC+ N + +A + + H R+L +D D+HHG+G Q F V+ +S H+Y
Sbjct: 615 DAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQHIFEEDPSVLYISLHRY 674
Query: 197 GGG-FFPCS--GDMYEIGAEGGRYYSVNV 222
G FFP G IG G ++VNV
Sbjct: 675 DHGTFFPMGNEGACTRIGKATGTGFTVNV 703
Score = 183 (69.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 63/226 (27%), Positives = 101/226 (44%)
Query: 10 YNPDVGNFH--YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEY 67
++ + FH + P +P RL I ++ GL + ++ A ++ HS EY
Sbjct: 90 FDEQLNEFHCLWDDSFPERPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEY 149
Query: 68 IDFLHTVSPDKIHEHTKFLCQFASGEDCPIFH-GLYDFCSMYTGASLE--GAI---QLNN 121
ID + T + + + L A D H Y + +G+ L A+ ++ N
Sbjct: 150 IDLMETTQ----YMNEEELHVLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLEAEIRN 205
Query: 122 NCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQ 179
+AI G HHA+ S G+C N + +A + H RVL +D DVHHG G+Q
Sbjct: 206 G---MAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGIQ 261
Query: 180 DAFYLTDRVMTVSFHKYGGG-FFPC--SGDMYEIGAEGGRYYSVNV 222
AF V+ S H+Y G F+P + + G G+ Y++NV
Sbjct: 262 FAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYTINV 307
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 179 (68.1 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 55/207 (26%), Positives = 97/207 (46%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P R+ VI + G+ ++ + KA + H+ ++++ + ++S K
Sbjct: 83 PDRIRVIWEKLQLAGVTQRCVVLGGSKAEDKHLKLVHTKKHVNLVKSISTKKKDSRRN-- 140
Query: 87 CQFASGEDCPIFHG-LYDFCSMYTGASLEGAIQLNNN--CCDIAINWSGGLHHAKKSEAS 143
+ AS D +G + + G+ ++ A ++ C AI G HHA+ EA
Sbjct: 141 -KIASQLDSIYLNGGSSEAAYLAAGSVVKVAEKVAEGELDCGFAIVRPPG-HHAESDEAM 198
Query: 144 GFCYVNDIVIAILELLKYHP-----RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYG- 197
GFC N++ +A LL P ++L +D D+HHG+G Q F+ RV+ S H++
Sbjct: 199 GFCLFNNVAVAASFLLNERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDH 258
Query: 198 GGFFPCS--GDMYEIGAEGGRYYSVNV 222
G F+P GD +G G +++NV
Sbjct: 259 GSFYPFGDDGDFNMVGEGPGEGFNINV 285
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 177 (67.4 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 58/205 (28%), Positives = 94/205 (45%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQI-YRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHE 81
HP +P RL I + + G+ + + + ++ H++E++D + T S
Sbjct: 171 HPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHTSEHVDAVDTTSQLLYSY 230
Query: 82 HTK--FLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKK 139
T + ++ S + GL C+ G ++ N A+ G HHA
Sbjct: 231 FTSDTYANEY-SARAARLAAGL---CADLATDIFTGRVK--NG---FALVRPPG-HHAGV 280
Query: 140 SEASGFCYVNDIVIAILELLKYHPR-VLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKY-G 197
A GFC N+ +A L + VL +D DVHHG+G Q+ F V+ +S H++ G
Sbjct: 281 RHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEG 340
Query: 198 GGFFPCSGDMYEIGAEGGRYYSVNV 222
G F+P +G E+G+ GG Y VNV
Sbjct: 341 GNFYPGTGAADEVGSNGGEGYCVNV 365
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 178 (67.7 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 41/112 (36%), Positives = 60/112 (53%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA S++SGFC N++ +A + H RVL +D DVHHG+G Q+ FY VM +S
Sbjct: 560 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMS 619
Query: 193 FHKYG-GGFFPCSG--DMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
H++ G F+P D ++G G SVNV + + +M +RV
Sbjct: 620 IHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRV 671
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/92 (36%), Positives = 46/92 (50%)
Query: 135 HHAKKSEASGFCYVNDIVIAILE-LLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSF 193
HHA GFC N++ A E R+L +D+DVHHG G Q FY RV+ S
Sbjct: 145 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 204
Query: 194 HKYGGG-FFPC--SGDMYEIGAEGGRYYSVNV 222
H++ G F+P D IG+ G Y+ N+
Sbjct: 205 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANL 236
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 178 (67.7 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 41/112 (36%), Positives = 60/112 (53%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA S++SGFC N++ +A + H RVL +D DVHHG+G Q+ FY VM +S
Sbjct: 562 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMS 621
Query: 193 FHKYG-GGFFPCSG--DMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
H++ G F+P D ++G G SVNV + + +M +RV
Sbjct: 622 IHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRV 673
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/92 (36%), Positives = 46/92 (50%)
Query: 135 HHAKKSEASGFCYVNDIVIAILE-LLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSF 193
HHA GFC N++ A E R+L +D+DVHHG G Q FY RV+ S
Sbjct: 147 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 206
Query: 194 HKYGGG-FFPC--SGDMYEIGAEGGRYYSVNV 222
H++ G F+P D IG+ G Y+ N+
Sbjct: 207 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANL 238
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 178 (67.7 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 41/112 (36%), Positives = 60/112 (53%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA S++SGFC N++ +A + H RVL +D DVHHG+G Q+ FY VM +S
Sbjct: 562 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMS 621
Query: 193 FHKYG-GGFFPCSG--DMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
H++ G F+P D ++G G SVNV + + +M +RV
Sbjct: 622 IHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRV 673
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/92 (36%), Positives = 46/92 (50%)
Query: 135 HHAKKSEASGFCYVNDIVIAILE-LLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSF 193
HHA GFC N++ A E R+L +D+DVHHG G Q FY RV+ S
Sbjct: 147 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 206
Query: 194 HKYGGG-FFPC--SGDMYEIGAEGGRYYSVNV 222
H++ G F+P D IG+ G Y+ N+
Sbjct: 207 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANL 238
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 175 (66.7 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 63/229 (27%), Positives = 106/229 (46%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P RLS + Y L ++ + S ++ HS+E+++ S ++E L
Sbjct: 30 PERLSASYEQLQCYHLVERCVPVPAREGSEEEILLVHSSEHLEAAK--STQTMNEEE--L 85
Query: 87 CQFASGEDCPIFH-GLYDFCSMYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSEAS 143
+ + D FH Y + GA+L+ ++ C +A+ G HH++++ A+
Sbjct: 86 KRISGNYDSFFFHPNTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPG-HHSQRNAAN 144
Query: 144 GFCYVNDIVIAI-LELLKYH-PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG-F 200
GFC N++ IA LKY R+L +D DVHHG G Q F V+ S+H+Y F
Sbjct: 145 GFCLFNNVAIAAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDQSVLYFSWHRYEHQEF 204
Query: 201 FPC--SGDMYEIGAEGGRYYSVNVR-NRDLSPHSSHKRMFRERVHSLLP 246
+P D +G G+ +++N+ N+ +S + F H LLP
Sbjct: 205 WPSLKESDYDAVGLGKGKGFNINLPWNKVGMGNSDYLAAF---FHVLLP 250
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 174 (66.3 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 61/222 (27%), Positives = 103/222 (46%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDF--LHTVSPDK 78
A H R+ I S ++ +G +K + KAS + HS Y F + + K
Sbjct: 481 ASHVENGGRIQSIWSKLIEHGHVQKCEKVTAKKASLEQLQLVHSQTYTTFFAVSPTACLK 540
Query: 79 IHEHTKFLCQFAS------GEDCPIFHGLYDFCSMYTGASLEGA--IQLNNNCCDIAI-N 129
I ++ L +F G D + ++ S T A L I+L++ + + N
Sbjct: 541 IDANSLPLKRFLQLPCGGIGVDSDTY---FNDASTQTAARLAAGTLIELSSQVAEGRLKN 597
Query: 130 WSGGL----HHAKKSEASGFCYVNDIVIAILELLKYHP----RVLYIDIDVHHGDGVQDA 181
+ HHA+ +A GFC+ N++ +A+ L +P ++ ID DVHHG+G Q +
Sbjct: 598 GFACIRPPGHHAEHEQAMGFCFFNNVAVAVKVLQTKYPAQCAKIAIIDWDVHHGNGTQLS 657
Query: 182 FYLTDRVMTVSFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
F V+ +S H++ G FFP +G + E+G + +VNV
Sbjct: 658 FENDPNVLYMSLHRHDKGNFFPGTGSVTEVGKNDAKGLTVNV 699
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 172 (65.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 63/229 (27%), Positives = 105/229 (45%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFL 86
P RL+ + +GL ++ +AS ++ HS EY+ L T+ L
Sbjct: 28 PERLTTALERLQQHGLKQRCLQLVAREASEAELGLVHSPEYVALLQGTQA----LGTREL 83
Query: 87 CQFASGEDCPIFHGLYDFCS-MYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSEAS 143
+ D H C+ + GA+L+ A+ +A+ G HH++++ A+
Sbjct: 84 QALSKEYDAVYLHPSTFHCARLAVGAALQLVDAVLTGAVRNGLALVRPPG-HHSQRATAN 142
Query: 144 GFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG-F 200
GFC N++ IA + H R+L +D DVHHG G+Q F V+ S+H+Y G F
Sbjct: 143 GFCVFNNVAIAAKHAQQKHGLRRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGHF 202
Query: 201 FPC--SGDMYEIGAEGGRYYSVNVR-NRDLSPHSSHKRMFRERVHSLLP 246
+PC D +G G ++VN+ N+ ++ + F +H LLP
Sbjct: 203 WPCLRESDADAVGRGRGLGFTVNLPWNQVGMGNADYVAAF---LHVLLP 248
>UNIPROTKB|E7EUZ1 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
Length = 296
Score = 165 (63.1 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 63/222 (28%), Positives = 96/222 (43%)
Query: 14 VGNFH--YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFL 71
+ FH + P P RL I ++ GL + ++ A ++ HS EYID +
Sbjct: 39 LNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLM 98
Query: 72 HTVSPDKIHEHTKFLCQFASGEDCPIFH-GLYDFCSMYTGASLE--GAI---QLNNNCCD 125
T ++E L A D H Y + +G+ L A+ ++ N
Sbjct: 99 ETTQ--YMNEGE--LRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNG--- 151
Query: 126 IAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFY 183
+AI G HHA+ S G+C N + +A + H RVL +D DVHHG G Q F
Sbjct: 152 MAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFD 210
Query: 184 LTDRVMTVSFHKYGGG-FFPC--SGDMYEIGAEGGRYYSVNV 222
V+ S H+Y G F+P + + G G+ Y++NV
Sbjct: 211 QDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINV 252
>UNIPROTKB|C9J8B8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328
HGNC:HGNC:18128 ChiTaRS:HDAC10 HOGENOM:HOG000225183 IPI:IPI00446419
SMR:C9J8B8 STRING:C9J8B8 Ensembl:ENST00000448072 Uniprot:C9J8B8
Length = 619
Score = 169 (64.5 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 64/231 (27%), Positives = 104/231 (45%)
Query: 26 KPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKF 85
+P RL+ + GL ++ +AS ++ HS EY+ + E
Sbjct: 27 RPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEE---- 82
Query: 86 LCQFASGE-DCPIFHGLYDFCS-MYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSE 141
Q SG+ D FH C+ + GA L+ A+ +A+ G HH +++
Sbjct: 83 -LQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPG-HHGQRAA 140
Query: 142 ASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG 199
A+GFC N++ IA + H R+L +D DVHHG G+Q F V+ S+H+Y G
Sbjct: 141 ANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHG 200
Query: 200 -FFPC--SGDMYEIGAEGGRYYSVNVR-NRDLSPHSSHKRMFRERVHSLLP 246
F+P D +G G ++VN+ N+ ++ + F +H LLP
Sbjct: 201 RFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAF---LHLLLP 248
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 169 (64.5 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 64/231 (27%), Positives = 104/231 (45%)
Query: 26 KPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKF 85
+P RL+ + GL ++ +AS ++ HS EY+ + E
Sbjct: 27 RPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEE---- 82
Query: 86 LCQFASGE-DCPIFHGLYDFCS-MYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSE 141
Q SG+ D FH C+ + GA L+ A+ +A+ G HH +++
Sbjct: 83 -LQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPG-HHGQRAA 140
Query: 142 ASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG 199
A+GFC N++ IA + H R+L +D DVHHG G+Q F V+ S+H+Y G
Sbjct: 141 ANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHG 200
Query: 200 -FFPC--SGDMYEIGAEGGRYYSVNVR-NRDLSPHSSHKRMFRERVHSLLP 246
F+P D +G G ++VN+ N+ ++ + F +H LLP
Sbjct: 201 RFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAF---LHLLLP 248
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 169 (64.5 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 64/219 (29%), Positives = 96/219 (43%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSA----EYIDFLHTVSPDK 78
HP P R+ I + GL ++ RP A + R H+ E I +HT +
Sbjct: 146 HPEDPRRIYYIYKELCRAGLVDDIESTRPLVA--RPLKRIHARNATEEEISLVHTAAHYA 203
Query: 79 IHEHTKF-----LCQFASGEDCPIFHGLYDFCSMYT-GASLEGAIQLNNNCCD--IAINW 130
E TK L D F+ L S+ + G ++E + + IA+
Sbjct: 204 FVESTKDMSDEELIALEHTRDSIYFNNLTFASSLLSVGGAIETCLAVATRKVKNAIAVIR 263
Query: 131 SGGLHHAKKSEASGFCYVNDIVIAIL---ELLKYHPR-VLYIDIDVHHGDGVQDAFYLTD 186
G HHA+ + GFC N++ +A + L R ++ +D DVHHG+G+Q AFY
Sbjct: 264 PPG-HHAEHDKTMGFCLFNNVSVAARVCQQRLGLSCRKIMILDWDVHHGNGIQKAFYDDP 322
Query: 187 RVMTVSFHKY-GGGFFPCS--GDMYEIGAEGGRYYSVNV 222
V+ +S H Y G F+P GD GA G +VN+
Sbjct: 323 NVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNI 361
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 168 (64.2 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 64/232 (27%), Positives = 111/232 (47%)
Query: 27 PHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLH---TVSPDKIHEHT 83
P RL+ + GL ++ +AS ++ HS EYI + T+ +++H +
Sbjct: 28 PERLTAALDGLRQRGLEERCLCLSACEASEEELGLVHSPEYIALVQKTQTLDKEELHALS 87
Query: 84 KFLCQFASGEDCPIFHGLYDFCS-MYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKS 140
K Q+ + FH C+ + GA+L+ A+ +A+ G HH++++
Sbjct: 88 K---QY----NAVYFHPDTFHCARLAAGAALQLVDAVLTGAVHNGLALVRPPG-HHSQRA 139
Query: 141 EASGFCYVNDIVIAILELL-KYH-PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYG- 197
A+GFC N++ +A KY R+L +D DVHHG G+Q F V+ S+H+Y
Sbjct: 140 AANGFCVFNNVALAAKHAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFSWHRYEH 199
Query: 198 GGFFPC--SGDMYEIGAEGGRYYSVNVR-NRDLSPHSSHKRMFRERVHSLLP 246
G F+P D +G G+ ++VN+ N+ ++ + F +H LLP
Sbjct: 200 GSFWPFLPESDADAVGQGQGQGFTVNLPWNQVGMGNADYLAAF---LHVLLP 248
>UNIPROTKB|Q604Q2 [details] [associations]
symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
PATRIC:22608838 Uniprot:Q604Q2
Length = 310
Score = 162 (62.1 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 60/211 (28%), Positives = 85/211 (40%)
Query: 5 TVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHS 64
T Y +P G HP RL+ I S + ++ P +A + HS
Sbjct: 2 TTLYISHPVFLRHDTGPGHPEGSVRLAAIESALAAPEFRSLRRLEAP-RADISRLELVHS 60
Query: 65 AEYIDFLHTVSPDKIHEHTKF--LCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNN 122
+I+ + P H + SGE H + C + G N
Sbjct: 61 RRHIERVFASLPQTGHHFVDADTVVSPESGEAA--LHAVGAVCLAVD--EVIGKRARNAF 116
Query: 123 CCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQD 180
C A+ G HHA+ A GFC N+I IA L H R+ +D DVHHG+G Q
Sbjct: 117 C---AVRPPG--HHAEPDAAMGFCLFNNIAIAAAHALANHGLQRIAIVDFDVHHGNGTQA 171
Query: 181 AFYLTDRVMTVSFHKYGGGFFPCSGDMYEIG 211
AF +V+ VS H+Y ++P +G E G
Sbjct: 172 AFRRNPQVLYVSTHQYP--WYPGTGSAEETG 200
>UNIPROTKB|F1RXT2 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
Length = 677
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 57/205 (27%), Positives = 91/205 (44%)
Query: 26 KPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKF 85
+P RL+ + GL ++ +AS ++ HS EY+ L E
Sbjct: 27 RPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQALSTEELQAL 86
Query: 86 LCQFASGEDCPIFHGLYDFCS-MYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSEA 142
QF D FH C+ + GA+L+ A+ +A+ G HH++++ A
Sbjct: 87 SRQF----DAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPG-HHSQRAAA 141
Query: 143 SGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG- 199
+GFC N + IA + H R+L +D D+HHG G Q F V+ S+H+Y G
Sbjct: 142 NGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGR 201
Query: 200 FFPC--SGDMYEIGAEGGRYYSVNV 222
F+P D +G G ++VN+
Sbjct: 202 FWPYLRESDADTVGRGRGLGFTVNL 226
>UNIPROTKB|I3LDD6 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
Length = 677
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 57/205 (27%), Positives = 91/205 (44%)
Query: 26 KPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKF 85
+P RL+ + GL ++ +AS ++ HS EY+ L E
Sbjct: 29 RPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQALSTEELQAL 88
Query: 86 LCQFASGEDCPIFHGLYDFCS-MYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSEA 142
QF D FH C+ + GA+L+ A+ +A+ G HH++++ A
Sbjct: 89 SRQF----DAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPG-HHSQRAAA 143
Query: 143 SGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG- 199
+GFC N + IA + H R+L +D D+HHG G Q F V+ S+H+Y G
Sbjct: 144 NGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGR 203
Query: 200 FFPC--SGDMYEIGAEGGRYYSVNV 222
F+P D +G G ++VN+
Sbjct: 204 FWPYLRESDADTVGRGRGLGFTVNL 228
>UNIPROTKB|Q3Z9M2 [details] [associations]
symbol:DET0330 "Histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 159 (61.0 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 59/209 (28%), Positives = 85/209 (40%)
Query: 6 VSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSA 65
V YN N G H P RL I I +GL ++ P + ++ FH+
Sbjct: 3 VGLVYNHIYLNHETGT-HVENPDRLLAIMEYINTHGLKDRLVHVEPKRVGLGELEGFHTR 61
Query: 66 EYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCD 125
+YI + V +L Q D I Y+ G LEG ++ + +
Sbjct: 62 KYISRVEEVG----FSGGGWLDQ-----DTVISVDSYETALYAVGGVLEGVDKVLSGELE 112
Query: 126 IA-INWSGGLHHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAF 182
A + HHA + GFC N++ + L L H RV +D DVHHG+G+Q
Sbjct: 113 SAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVDFDVHHGNGIQHVC 172
Query: 183 YLTDRVMTVSFHKYGGGFFPCSGDMYEIG 211
RV +S H+ FP +GD E G
Sbjct: 173 LNDPRVTYISTHQIH--HFPFTGDSCEDG 199
>TIGR_CMR|DET_0330 [details] [associations]
symbol:DET_0330 "histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 159 (61.0 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 59/209 (28%), Positives = 85/209 (40%)
Query: 6 VSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSA 65
V YN N G H P RL I I +GL ++ P + ++ FH+
Sbjct: 3 VGLVYNHIYLNHETGT-HVENPDRLLAIMEYINTHGLKDRLVHVEPKRVGLGELEGFHTR 61
Query: 66 EYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCD 125
+YI + V +L Q D I Y+ G LEG ++ + +
Sbjct: 62 KYISRVEEVG----FSGGGWLDQ-----DTVISVDSYETALYAVGGVLEGVDKVLSGELE 112
Query: 126 IA-INWSGGLHHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAF 182
A + HHA + GFC N++ + L L H RV +D DVHHG+G+Q
Sbjct: 113 SAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVDFDVHHGNGIQHVC 172
Query: 183 YLTDRVMTVSFHKYGGGFFPCSGDMYEIG 211
RV +S H+ FP +GD E G
Sbjct: 173 LNDPRVTYISTHQIH--HFPFTGDSCEDG 199
>UNIPROTKB|Q9KQF6 [details] [associations]
symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
Uniprot:Q9KQF6
Length = 306
Score = 156 (60.0 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 54/182 (29%), Positives = 78/182 (42%)
Query: 20 GAKHPMKPHRL---SVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFL--HTV 74
G ++P+ +RL ++ + + P A + R H +Y+ L T+
Sbjct: 18 GHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRITRLHDPDYVQALLEGTL 77
Query: 75 SPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGL 134
S K+ F + I LY T ++E A+Q +AI+ SGG
Sbjct: 78 SAAKMRR-----IGFPWSKPL-IERTLYSVGG--TCLTVEQALQSG-----VAIHLSGGY 124
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA SGFC ND+ IA L +VL ID DVHHGDG D ++T+S
Sbjct: 125 HHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLS 184
Query: 193 FH 194
FH
Sbjct: 185 FH 186
>TIGR_CMR|VC_2042 [details] [associations]
symbol:VC_2042 "histone deacetylase/AcuC/AphA family
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
ProtClustDB:CLSK874650 Uniprot:Q9KQF6
Length = 306
Score = 156 (60.0 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 54/182 (29%), Positives = 78/182 (42%)
Query: 20 GAKHPMKPHRL---SVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFL--HTV 74
G ++P+ +RL ++ + + P A + R H +Y+ L T+
Sbjct: 18 GHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRITRLHDPDYVQALLEGTL 77
Query: 75 SPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGL 134
S K+ F + I LY T ++E A+Q +AI+ SGG
Sbjct: 78 SAAKMRR-----IGFPWSKPL-IERTLYSVGG--TCLTVEQALQSG-----VAIHLSGGY 124
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA SGFC ND+ IA L +VL ID DVHHGDG D ++T+S
Sbjct: 125 HHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLS 184
Query: 193 FH 194
FH
Sbjct: 185 FH 186
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 56/196 (28%), Positives = 91/196 (46%)
Query: 23 HPMKPHR-LSVINSLI-LGY--GLHKKMQIYR--PYK-ASYHDMCRFHSAEYIDFLHTVS 75
HP P R L V ++ GY + ++ P + A+ ++ + HS E D +
Sbjct: 77 HPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYD--RVTN 134
Query: 76 PDKI-HEHTKFLCQFASGEDCPIFHGLYDFCS-MYTGASLEG--AIQLNNNCCDIAINWS 131
+K+ HE L D ++ FC+ + G+++E A+ A+
Sbjct: 135 TEKMSHED---LANLEKISDSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVRP 191
Query: 132 GGLHHAKKSEASGFCYVNDIVIAILELLKYHP----RVLYIDIDVHHGDGVQDAFYLTDR 187
G HHA+ + GFC N++ + +L+ P RVL +D D+HHG+G Q AFY
Sbjct: 192 PG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPN 250
Query: 188 VMTVSFHKYGGG-FFP 202
V+ VS H+Y G F+P
Sbjct: 251 VLYVSLHRYENGRFYP 266
>TIGR_CMR|CHY_0263 [details] [associations]
symbol:CHY_0263 "histone deacetylase domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
Uniprot:Q3AFE9
Length = 433
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 135 HHAKKSEAS--GFCYVNDIVIAI--LELLKYHPRVLYIDIDVHHGDGVQDAFYLTDRVMT 190
HHA ++ GFC +N++ I + L +K ++ ID DVHHGDG QD FY V+
Sbjct: 107 HHATRTVYGNRGFCNINNVAITVDYLRWVKGVKKIAIIDTDVHHGDGTQDIFYHDPDVLF 166
Query: 191 VSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHSLLP 246
+S H+ G +P +G + E G Y + N L P S + + ++LP
Sbjct: 167 ISLHQDGRTLYPGTGFIDEAGTPNA--YGTTI-NLPLPPGSGDEEILYLLEEAVLP 219
>UNIPROTKB|G4NCI1 [details] [associations]
symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
"Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
silencing at telomere" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
chromatin" evidence=ISS] [GO:0031060 "regulation of histone
methylation" evidence=ISS] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
"histone H3 deacetylation" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
Uniprot:G4NCI1
Length = 758
Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/159 (27%), Positives = 79/159 (49%)
Query: 53 KASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDF-CSMYT-G 110
+A+ ++C H A++ D++ +S + + + G+ ++ G F S+ + G
Sbjct: 150 EATKEEICLVHYAKHYDWVKELSTKPTAQLRRLTKELDKGQTS-VYVGSLTFEASLISAG 208
Query: 111 ASLEGAIQLNNNCCD--IAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP----R 164
++E + + A+ G HHA++ A GFC N++ IA +P +
Sbjct: 209 GAIETCKSIVSGQIKNGFAVIRPPG-HHAEQDSAMGFCIFNNVPIAAKVCQAEYPEICQK 267
Query: 165 VLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG-FFP 202
VL +D DVHHG+G+Q+ FY V+ +S H Y G F+P
Sbjct: 268 VLILDWDVHHGNGIQNVFYEDPNVLYISLHVYKNGEFYP 306
>UNIPROTKB|E2RS82 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
Length = 550
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 40/118 (33%), Positives = 64/118 (54%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HH++++ A+GFC N++ IA + H R+L +D DVHHG G+Q F V+ S
Sbjct: 16 HHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFS 75
Query: 193 FHKYGGG-FFPC--SGDMYEIGAEGGRYYSVNVR-NRDLSPHSSHKRMFRERVHSLLP 246
+H+Y G F+P D +G GR ++VN+ N+ ++ + F +H LLP
Sbjct: 76 WHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAF---LHVLLP 130
>TIGR_CMR|SPO_3195 [details] [associations]
symbol:SPO_3195 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
Uniprot:Q5LNK8
Length = 364
Score = 150 (57.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 59/230 (25%), Positives = 96/230 (41%)
Query: 24 PMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIHEHT 83
P P + +LI GLH +++ A+ D+ R H YID +S E
Sbjct: 39 PEAPETKRRLKNLIEVTGLHSDLEMVTGGSATIEDVLRVHPRSYIDEFRRLSDSGGGE-- 96
Query: 84 KFLCQFASGEDCPIFHGLYDFCSMYTGA---SLEGAIQLNNNCCDIAINWSGGLHHAKKS 140
G P G ++ + G ++EG +Q A++ G HH
Sbjct: 97 -------LGLRTPFGPGAFEIAMLSAGLVIDAVEGVVQGRYRNA-YALSRPPG-HHCLPD 147
Query: 141 EASGFCYVNDIVIAILELLKYHP---RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYG 197
+GFC + +I IAI E K +V +D DVHHG+G + +Y D V+T+S H+
Sbjct: 148 WPNGFCLLANIAIAI-EAAKAKGLLGKVAVLDWDVHHGNGTEAIYYERDDVLTISIHQ-- 204
Query: 198 GGFFPC-SGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHSLLP 246
+P +G + + G G +++N+ L P H ++P
Sbjct: 205 DRCYPHDTGSIDDQGKGAGLGFNMNI---PLPPGCGHNAYVEATERLIIP 251
>UNIPROTKB|H0YH91 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
Length = 384
Score = 130 (50.8 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 171 DVHHGDGVQDAFYLTDRVMTVSFHKYG-GGFFPCSGDMYEIGAEGGRYYSVNV 222
DVHHG+G Q FY V+ +S H++ G FFP SG + E+GA G ++VNV
Sbjct: 139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNV 191
Score = 56 (24.8 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSP 76
++HP R+ I S + GL + + R KAS ++ HS ++ L+ +P
Sbjct: 19 SRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV-LLYGTNP 73
>UNIPROTKB|Q484X2 [details] [associations]
symbol:CPS_1655 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 143 (55.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 46/172 (26%), Positives = 77/172 (44%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIY--RPYKASYHDMCRFHSAEYIDFLH 72
G + G HP RL+ I+ ++ GL ++ + +P S + H+ E+IDF+
Sbjct: 12 GEHNMGEHHPENGKRLTAISDQLIRSGLDYVVRQFDSKPIDKSL--LALAHTQEHIDFVF 69
Query: 73 TVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAI--NW 130
+P++ E+ F GED + GA+++ + A
Sbjct: 70 DNAPNEGEEN------FTVGEDSVMNEKTLTSIMYSAGAAVDAVDLVMEGTLGAAFCATR 123
Query: 131 SGGLHHAKKSEASGFCYVNDIVIAILELL-KYH-PRVLYIDIDVHHGDGVQD 180
G HHA+ + GFC+ N++ +A KY RV +D DVHHG+G +D
Sbjct: 124 PPG-HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTED 174
>TIGR_CMR|CPS_1655 [details] [associations]
symbol:CPS_1655 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 143 (55.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 46/172 (26%), Positives = 77/172 (44%)
Query: 15 GNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIY--RPYKASYHDMCRFHSAEYIDFLH 72
G + G HP RL+ I+ ++ GL ++ + +P S + H+ E+IDF+
Sbjct: 12 GEHNMGEHHPENGKRLTAISDQLIRSGLDYVVRQFDSKPIDKSL--LALAHTQEHIDFVF 69
Query: 73 TVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAI--NW 130
+P++ E+ F GED + GA+++ + A
Sbjct: 70 DNAPNEGEEN------FTVGEDSVMNEKTLTSIMYSAGAAVDAVDLVMEGTLGAAFCATR 123
Query: 131 SGGLHHAKKSEASGFCYVNDIVIAILELL-KYH-PRVLYIDIDVHHGDGVQD 180
G HHA+ + GFC+ N++ +A KY RV +D DVHHG+G +D
Sbjct: 124 PPG-HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTED 174
>UNIPROTKB|Q4K3I0 [details] [associations]
symbol:aphA_3 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_263203.1
ProteinModelPortal:Q4K3I0 STRING:Q4K3I0 GeneID:3480515
KEGG:pfl:PFL_6145 PATRIC:19881827 HOGENOM:HOG000225182 OMA:GAWARWT
ProtClustDB:CLSK865777 BioCyc:PFLU220664:GIX8-6188-MONOMER
Uniprot:Q4K3I0
Length = 343
Score = 142 (55.0 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 44/154 (28%), Positives = 62/154 (40%)
Query: 71 LHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCD-IAIN 129
L +V P +H + F G PI G + +L + N A+
Sbjct: 97 LRSVIPTSLHGQLGYY-SFDGG--APITAGTWQAAYSAAQVALTAQAHIQNGAHSAFALC 153
Query: 130 WSGGLHHAKKSEASGFCYVNDIVIAILELLKY-HPRVLYIDIDVHHGDGVQDAFYLTDRV 188
G HHA G+CY+N+ IA L H +V +D+D HHG+G Q FY V
Sbjct: 154 RPPG-HHAAGDLMGGYCYLNNAAIAAQAFLDQGHRKVAILDVDYHHGNGTQSIFYERSDV 212
Query: 189 MTVSFHKYGGGFFPCS-GDMYEIGAEGGRYYSVN 221
+ S H + FP G E G G ++ N
Sbjct: 213 LFTSIHGHPEAEFPFFLGYADECGEGAGEGFNFN 246
>UNIPROTKB|Q47YS1 [details] [associations]
symbol:CPS_3373 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 139 (54.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 32/78 (41%), Positives = 42/78 (53%)
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYL 184
++N +GG HHA + SGFC +ND+ +A L +L+ +VL D DVH GDG
Sbjct: 112 SLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASN 171
Query: 185 TDRVMTVSFHKYGGGFFP 202
V TVS H G FP
Sbjct: 172 NQNVFTVSIH--GEKNFP 187
>TIGR_CMR|CPS_3373 [details] [associations]
symbol:CPS_3373 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 139 (54.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 32/78 (41%), Positives = 42/78 (53%)
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYL 184
++N +GG HHA + SGFC +ND+ +A L +L+ +VL D DVH GDG
Sbjct: 112 SLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASN 171
Query: 185 TDRVMTVSFHKYGGGFFP 202
V TVS H G FP
Sbjct: 172 NQNVFTVSIH--GEKNFP 187
>UNIPROTKB|I3L961 [details] [associations]
symbol:I3L961 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000024590
Uniprot:I3L961
Length = 606
Score = 143 (55.4 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 94 DCPIFHGLYDFCS-MYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVND 150
D FH C+ + GA+L+ A+ +A+ G HH++++ A+GFC N
Sbjct: 47 DAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPG-HHSQRAAANGFCVFNS 105
Query: 151 IVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG-FFPC--SG 205
+ IA + H R+L +D D+HHG G Q F V+ S+H+Y G F+P
Sbjct: 106 VAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRES 165
Query: 206 DMYEIGAEGGRYYSVNV 222
D +G G ++VN+
Sbjct: 166 DADTVGRGRGLGFTVNL 182
>UNIPROTKB|Q8EFZ9 [details] [associations]
symbol:SO_1815 "Histone deacetylase superfamily protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 138 (53.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 32/88 (36%), Positives = 47/88 (53%)
Query: 110 GASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELL---KYHPRVL 166
G SL A+ L IA++ +GG HHA SG+C ND++IA +L+ + H ++L
Sbjct: 98 GTSLTAALALQTG---IALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLH-KIL 153
Query: 167 YIDIDVHHGDGVQDAFYLTDRVMTVSFH 194
D DVH GDG L +++ S H
Sbjct: 154 IFDCDVHQGDGTATLSQLHQGIISCSIH 181
>TIGR_CMR|SO_1815 [details] [associations]
symbol:SO_1815 "histone deacetylase/AcuC/AphA family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 138 (53.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 32/88 (36%), Positives = 47/88 (53%)
Query: 110 GASLEGAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELL---KYHPRVL 166
G SL A+ L IA++ +GG HHA SG+C ND++IA +L+ + H ++L
Sbjct: 98 GTSLTAALALQTG---IALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLH-KIL 153
Query: 167 YIDIDVHHGDGVQDAFYLTDRVMTVSFH 194
D DVH GDG L +++ S H
Sbjct: 154 IFDCDVHQGDGTATLSQLHQGIISCSIH 181
>UNIPROTKB|I3LKB5 [details] [associations]
symbol:I3LKB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000030674
Uniprot:I3LKB5
Length = 621
Score = 143 (55.4 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 94 DCPIFHGLYDFCS-MYTGASLE--GAIQLNNNCCDIAINWSGGLHHAKKSEASGFCYVND 150
D FH C+ + GA+L+ A+ +A+ G HH++++ A+GFC N
Sbjct: 61 DAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPG-HHSQRAAANGFCVFNS 119
Query: 151 IVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGG-FFPC--SG 205
+ IA + H R+L +D D+HHG G Q F V+ S+H+Y G F+P
Sbjct: 120 VAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRES 179
Query: 206 DMYEIGAEGGRYYSVNV 222
D +G G ++VN+
Sbjct: 180 DADTVGRGRGLGFTVNL 196
>UNIPROTKB|F1RPM1 [details] [associations]
symbol:LOC100625846 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
Length = 142
Score = 117 (46.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 189 MTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
MTVS HK+ GFFP +GD+ ++G GRYYSVNV +D
Sbjct: 1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 38
>UNIPROTKB|I3LHJ7 [details] [associations]
symbol:I3LHJ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 GeneTree:ENSGT00530000062889
Ensembl:ENSSSCT00000031343 Uniprot:I3LHJ7
Length = 51
Score = 117 (46.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 189 MTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
MTVS HK+ GFFP +GD+ ++G GRYYSVNV +D
Sbjct: 1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 38
>UNIPROTKB|E7EPS2 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00465375
ProteinModelPortal:E7EPS2 SMR:E7EPS2 Ensembl:ENST00000426196
ArrayExpress:E7EPS2 Bgee:E7EPS2 Uniprot:E7EPS2
Length = 269
Score = 134 (52.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/179 (28%), Positives = 76/179 (42%)
Query: 14 VGNFH--YGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFL 71
+ FH + P P RL I ++ GL + ++ A ++ HS EYID +
Sbjct: 94 LNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLM 153
Query: 72 HTVSPDKIHEHTKFLCQFASGEDCPIFH-GLYDFCSMYTGASLE--GAI---QLNNNCCD 125
T ++E L A D H Y + +G+ L A+ ++ N
Sbjct: 154 ETTQ--YMNEGE--LRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNG--- 206
Query: 126 IAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAF 182
+AI G HHA+ S G+C N + +A + H RVL +D DVHHG G Q F
Sbjct: 207 MAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTF 264
>UNIPROTKB|Q4KAJ1 [details] [associations]
symbol:aphA_1 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
Uniprot:Q4KAJ1
Length = 342
Score = 134 (52.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 31/90 (34%), Positives = 47/90 (52%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELL-KYHPRVLYIDIDVHHGDGVQDAFYLTDRVMTVSF 193
HHA + G+CY+N+ IA + + RV +D+D HHG+G Q+ FY V+ VS
Sbjct: 158 HHAAREYMGGYCYLNNAAIAAQHAITRGARRVAVLDVDFHHGNGTQNIFYDRGDVLFVSL 217
Query: 194 HKYGGGFFPC-SGDMYEIGAEGGRYYSVNV 222
H +P SG E G+ G ++N+
Sbjct: 218 HGDPAVSYPYFSGHASERGSGAGEGCNLNL 247
>UNIPROTKB|Q48DS3 [details] [associations]
symbol:PSPPH_4352 "Histone deacetylase family protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
ProtClustDB:CLSK909647 Uniprot:Q48DS3
Length = 305
Score = 132 (51.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 53/187 (28%), Positives = 75/187 (40%)
Query: 10 YNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYID 69
Y+PD H + PM RL + ++ GL +Q+ RP + H YI
Sbjct: 11 YSPDFPADH---RFPMDKFRL--LRDYLVDSGLTSDVQLMRPELCPADILALAHDPSYIS 65
Query: 70 FLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAIN 129
++ D E + L P L G SL A Q + +A +
Sbjct: 66 --RYLNGDLSREDQRRL-------GLPWSEALARRTVSAVGGSLLTAEQALKH--GMACH 114
Query: 130 WSGGLHHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDR 187
+GG HHA +GFC ND+ + LL+ +VL D DVH GDG T+
Sbjct: 115 LAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILADTED 174
Query: 188 VMTVSFH 194
+TVS H
Sbjct: 175 AITVSLH 181
>WB|WBGene00001838 [details] [associations]
symbol:hda-10 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
"histone deacetylase activity" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
Length = 517
Score = 134 (52.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 38/152 (25%), Positives = 65/152 (42%)
Query: 53 KASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGAS 112
+A ++ H+ Y+D + + + + F ++ ED + + + GAS
Sbjct: 58 EAEESEILAVHTKRYVDDVKSTETMTVEQQESFCTKY---EDIYVNSATWHRAKLAAGAS 114
Query: 113 LEGAIQ-LNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRVLYIDID 171
++ + IA G HHA E GFC N++ IA ++ +VL +D D
Sbjct: 115 IDLMTSVMAAKRPGIAFIRPPG-HHAMPDEGCGFCIFNNVAIAAKAAIQNGQKVLIVDYD 173
Query: 172 VHHGDGVQDAFYLTDR--VMTVSFHKYGGGFF 201
VH G+G Q+ V +S H+Y G F
Sbjct: 174 VHAGNGTQECVEQMGEGNVQLISIHRYENGHF 205
>TIGR_CMR|SPO_0250 [details] [associations]
symbol:SPO_0250 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
Uniprot:Q5LX39
Length = 308
Score = 130 (50.8 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 49/169 (28%), Positives = 71/169 (42%)
Query: 54 ASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGE-DCPIFHGLYDFCSMYTGAS 112
A+ D+ R H A Y+ + PD+ FA + D + G D GA
Sbjct: 47 AAEDDLLRIHPAGYVADIRDARPDE---------GFAQIDGDTFLSPGSVDAAFRAAGAV 97
Query: 113 LEGAIQL-----NNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP--RV 165
+ + N C AI G HHA++ A GFC + +A L +H RV
Sbjct: 98 VRAVDMVLGGEAQNAFC--AIRPPG--HHAERETAMGFCLFGNAALAAKHALDHHGLRRV 153
Query: 166 LYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYGGGFFPCSGDMYEIGAEG 214
+D DVHHG+G QD + R + ++ + +P SG E GA G
Sbjct: 154 AVVDFDVHHGNGTQDLLWDEARALLITSQQMP--LWPGSGRPDEDGAHG 200
>TAIR|locus:2119201 [details] [associations]
symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
"tubulin deacetylase activity" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019760 "glucosinolate metabolic process" evidence=RCA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
Length = 423
Score = 131 (51.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 30/90 (33%), Positives = 45/90 (50%)
Query: 135 HHAKKSEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVS 192
HHA GFC ++ IA + H R+ ID DVHHG+G DAF + +S
Sbjct: 201 HHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLS 260
Query: 193 FHKYGGGFFPCSGDMYEIGAEGGRYYSVNV 222
H+ G +P +G + +IG G ++N+
Sbjct: 261 THQDGS--YPGTGKISDIGKGKGEGTTLNL 288
>TAIR|locus:2180657 [details] [associations]
symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
Uniprot:Q944K3
Length = 387
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/182 (25%), Positives = 71/182 (39%)
Query: 1 MSNKTVSYFYNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMC 60
+S ++ Y + D+ HP + + ++ G ++ I P +AS D+
Sbjct: 71 LSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPLEASKIDLL 130
Query: 61 RFHSAEYIDFLHT-VSPDKIHE--HTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAI 117
HS Y++ L + + +I E F F + LY F G L +
Sbjct: 131 VVHSENYLNSLKSSATVARITEVAPVAFFPNFLVQQKV-----LYPFRKQVGGTILAAKL 185
Query: 118 QLNNNCCDIAINWSGGLHHAKKSEASGFCYVNDIVIAI-LELLKYH-PRVLYIDIDVHHG 175
AIN GG HH GFC DI + I L+ RV+ ID+D H G
Sbjct: 186 ATERGW---AINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQG 242
Query: 176 DG 177
+G
Sbjct: 243 NG 244
>UNIPROTKB|Q4K5L2 [details] [associations]
symbol:PFL_5403 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
KEGG:pfl:PFL_5403 PATRIC:19880291
BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
Length = 306
Score = 124 (48.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 52/187 (27%), Positives = 74/187 (39%)
Query: 10 YNPDVGNFHYGAKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYID 69
Y+P+ H + PM RL + ++ GL + + RP + H YI+
Sbjct: 11 YSPEFPAEH---RFPMDKFRL--LRDHLVDSGLTRDADLLRPELCPAEILALAHDPAYIE 65
Query: 70 FLHTVSPDKIHEHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAIN 129
+S + E + L P L G SL A Q + +A +
Sbjct: 66 --RYMSGELSREDQRRL-------GLPWSEALARRTVRAVGGSLLAAEQALEH--GLACH 114
Query: 130 WSGGLHHAKKSEASGFCYVNDIVIAILELLKYHP--RVLYIDIDVHHGDGVQDAFYLTDR 187
+GG HHA +GFC ND+ + LL+ RVL D DVH GDG T
Sbjct: 115 LAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCDVHQGDGTARILQHTAD 174
Query: 188 VMTVSFH 194
+TVS H
Sbjct: 175 AVTVSLH 181
>UNIPROTKB|B4DQE7 [details] [associations]
symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
deacetylase activity" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
Ensembl:ENST00000429103 Uniprot:B4DQE7
Length = 182
Score = 117 (46.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 189 MTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRD 226
MTVS HK+ GFFP +GD+ ++G GRYYSVNV +D
Sbjct: 1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 38
>UNIPROTKB|Q5LQF5 [details] [associations]
symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 52/224 (23%), Positives = 90/224 (40%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIH 80
A+H P + +L+ GL + + RP +A+ + H +ID L +V
Sbjct: 41 AEHFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCERGGG 100
Query: 81 EHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIA-INWSGGLHHAKK 139
+ +GE P + + G + + + A + HHA
Sbjct: 101 D---------AGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALP 151
Query: 140 SEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYG 197
A GFC + + + I + K + R+ +D DVHHG+G + F V+T+S H+
Sbjct: 152 DLAMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ-- 209
Query: 198 GGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
FP D IG +G ++NV S +++ F + V
Sbjct: 210 DNLFPL--DSGGIGVKGAGNSNINVPLPPGSGSGAYREAFEQIV 251
>TIGR_CMR|SPO_2535 [details] [associations]
symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 52/224 (23%), Positives = 90/224 (40%)
Query: 21 AKHPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLHTVSPDKIH 80
A+H P + +L+ GL + + RP +A+ + H +ID L +V
Sbjct: 41 AEHFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCERGGG 100
Query: 81 EHTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIA-INWSGGLHHAKK 139
+ +GE P + + G + + + A + HHA
Sbjct: 101 D---------AGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALP 151
Query: 140 SEASGFCYVNDIVIAILELLKYH--PRVLYIDIDVHHGDGVQDAFYLTDRVMTVSFHKYG 197
A GFC + + + I + K + R+ +D DVHHG+G + F V+T+S H+
Sbjct: 152 DLAMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ-- 209
Query: 198 GGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERV 241
FP D IG +G ++NV S +++ F + V
Sbjct: 210 DNLFPL--DSGGIGVKGAGNSNINVPLPPGSGSGAYREAFEQIV 251
>UNIPROTKB|F5GXM1 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 HGNC:HGNC:4852
ChiTaRS:HDAC1 EMBL:AL109945 IPI:IPI01010320
ProteinModelPortal:F5GXM1 SMR:F5GXM1 PRIDE:F5GXM1
Ensembl:ENST00000373541 UCSC:uc001bvc.1 ArrayExpress:F5GXM1
Bgee:F5GXM1 Uniprot:F5GXM1
Length = 289
Score = 122 (48.0 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 189 MTVSFHKYGGGFFPCSGDMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFR 238
MTVSFHKYG +FP +GD+ +IGA G+YY+VN RD S++ +F+
Sbjct: 1 MTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFK 49
>WB|WBGene00007953 [details] [associations]
symbol:hda-11 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELL--KYHPRVLYIDIDVHHGDG 177
AIN GG HHA S GFC+ DI +AI +L K + +D+D H G+G
Sbjct: 135 AINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNG 187
>UNIPROTKB|Q18477 [details] [associations]
symbol:hda-11 "Protein HDA-11" species:6239 "Caenorhabditis
elegans" [GO:0006476 "protein deacetylation" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELL--KYHPRVLYIDIDVHHGDG 177
AIN GG HHA S GFC+ DI +AI +L K + +D+D H G+G
Sbjct: 135 AINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNG 187
>DICTYBASE|DDB_G0280195 [details] [associations]
symbol:hdaC "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 dictyBase:DDB_G0280195 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:XP_641298.1
ProteinModelPortal:Q54VQ7 PRIDE:Q54VQ7 EnsemblProtists:DDB0237658
GeneID:8622431 KEGG:ddi:DDB_G0280195 OMA:NSEFETH Uniprot:Q54VQ7
Length = 1704
Score = 115 (45.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 32/123 (26%), Positives = 60/123 (48%)
Query: 135 HHA----KKSEA--SGFCYVNDIVIAI--LELLKYHPRVLYIDIDVHHGDGVQDAFYLTD 186
HHA + S+A G+C +N++ I L + R+ +D DVHHG+G Q+ D
Sbjct: 1212 HHAGRYGRTSDAPSQGYCLINNVAIGAKYASLTAGYSRIAVVDFDVHHGNGTQEILSGDD 1271
Query: 187 RVMTVSFHKYGGG--FFPCSG-DMYEIGAEGGRYYSVNVRNRDLSPHSSHKRMFRERVHS 243
+ +S H F+P +G D+ +I G++ N+ N L ++ ++ ++
Sbjct: 1272 NFLFISIHVCDEKRYFYPGTGQDVGDIDEVSGQFDG-NILNIGLKRNTGSAVFLQQWMNK 1330
Query: 244 LLP 246
++P
Sbjct: 1331 IIP 1333
Score = 56 (24.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 27/112 (24%), Positives = 45/112 (40%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIY-RPYKASYHDMCRFHSAEYIDFLHTVSPDKIHE 81
H KP R+ V S I + + + I+ P + + H A YI L T P + E
Sbjct: 1080 HLEKPDRIQVAVSCINEFASNPLVDIFDNPPEVDMRYVMAVHDANYIKKLETSLPPENSE 1139
Query: 82 HTKFLCQFASGEDCPI-----FHG----LYDFCSMYTGASLEGAIQLNNNCC 124
L SG + F G +YD + + S++ A++ + + C
Sbjct: 1140 FETHLESDKSGAMVTVASHKDFEGDDDNIYD--TFVSHRSIKAALRASGSVC 1189
Score = 52 (23.4 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 54 ASYHDMCRFHSAEYIDFLHTVSPDKIHEHTKFLCQFASGEDCPIF 98
A YH +C H +F H PD+I + +FAS IF
Sbjct: 1065 AIYHKICMQHKVP--NF-HLEKPDRIQVAVSCINEFASNPLVDIF 1106
>UNIPROTKB|F1NYW6 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
Uniprot:F1NYW6
Length = 357
Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAILELLKYHPRV---LYIDIDVHHGDGVQDAFY 183
AIN GG HH + GFC DI +AI L + P V ID+D H G+G + F
Sbjct: 133 AINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKATIIDLDAHQGNGHERDFM 192
Query: 184 LTDRVMTV-SFHKY---GGGF 200
RV + ++++Y G GF
Sbjct: 193 NDHRVYIMDAYNRYIYPGDGF 213
>UNIPROTKB|B5MCV5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00879737
ProteinModelPortal:B5MCV5 SMR:B5MCV5 STRING:B5MCV5
Ensembl:ENST00000405478 BindingDB:B5MCV5 ArrayExpress:B5MCV5
Bgee:B5MCV5 Uniprot:B5MCV5
Length = 204
Score = 109 (43.4 bits), Expect = 0.00045, P = 0.00045
Identities = 31/81 (38%), Positives = 38/81 (46%)
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAI---LELLKYHPRVLYIDIDVHHGDGVQDAFY 183
AIN GG HH GFC DI +AI E ++ R ID+D H G+G + F
Sbjct: 106 AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFM 165
Query: 184 LTDRV--MTV-SFHKYGGGFF 201
RV M V + H Y G F
Sbjct: 166 DDKRVYIMDVYNRHIYPGDRF 186
>FB|FBgn0051119 [details] [associations]
symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
Length = 343
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 47/186 (25%), Positives = 73/186 (39%)
Query: 23 HPMKPHRLSVINSLILGYGLHKKMQIYRPYKASYHDMCRFHSAEYIDFLH-TVSPDKIHE 81
HP + I+ L+ Y P + + + R H+ EY+ L +++ I E
Sbjct: 51 HPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRIHTREYLKSLRWSMNVACIAE 110
Query: 82 HTKFLCQFASGEDCPIFHGLYDFCSMYTGASLEGAIQLNNNCCDIAINWSGGLHHAKKSE 141
L F + L G+ L G + L+ AIN GG HH
Sbjct: 111 VP--LMAFVPNRYIQRSY-LRPMRFQAAGSILAGKLALDYGW---AINLGGGFHHCCSYR 164
Query: 142 ASGFCYVNDIVIAILELLKYHP----RVLYIDIDVHHGDGVQDAFYLTDRVMTVS-FHKY 196
GFC DI + I+ L + P R++ +D+D H G+G + F + V V F Y
Sbjct: 165 GGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDF---NNVAAVYIFDMY 221
Query: 197 GGGFFP 202
+P
Sbjct: 222 NAFVYP 227
>MGI|MGI:2385252 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
Length = 347
Score = 111 (44.1 bits), Expect = 0.00095, P = 0.00095
Identities = 39/116 (33%), Positives = 48/116 (41%)
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAI---LELLKYHPRVLYIDIDVHHGDGVQDAFY 183
AIN GG HH GFC DI +AI E ++ R ID+D H G+G + F
Sbjct: 134 AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFM 193
Query: 184 LTDRV--MTV-SFHKYGGGFFPCSGDMYEI----GAEGGRYYSVNVRN--RDLSPH 230
RV M V + H Y G F ++ G E Y RN R L H
Sbjct: 194 GDKRVYIMDVYNRHIYPGDRFAKEAIRRKVELEWGTEDEEYLEKVERNVRRSLQEH 249
>RGD|1311706 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
development" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
Genevestigator:B2GUW3 Uniprot:B2GUW3
Length = 347
Score = 111 (44.1 bits), Expect = 0.00095, P = 0.00095
Identities = 39/116 (33%), Positives = 48/116 (41%)
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAI---LELLKYHPRVLYIDIDVHHGDGVQDAFY 183
AIN GG HH GFC DI +AI E ++ R ID+D H G+G + F
Sbjct: 134 AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFM 193
Query: 184 LTDRV--MTV-SFHKYGGGFFPCSGDMYEI----GAEGGRYYSVNVRN--RDLSPH 230
RV M V + H Y G F ++ G E Y RN R L H
Sbjct: 194 GDKRVYIMDVYNRHIYPGDRFAKEAIRRKVELEWGTEDEEYLEKVERNVRRSLQEH 249
>UNIPROTKB|C9JEC8 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 IPI:IPI00879107 ProteinModelPortal:C9JEC8
SMR:C9JEC8 STRING:C9JEC8 Ensembl:ENST00000455904 BindingDB:C9JEC8
ArrayExpress:C9JEC8 Bgee:C9JEC8 Uniprot:C9JEC8
Length = 166
Score = 103 (41.3 bits), Expect = 0.00097, P = 0.00097
Identities = 23/59 (38%), Positives = 29/59 (49%)
Query: 127 AINWSGGLHHAKKSEASGFCYVNDIVIAI---LELLKYHPRVLYIDIDVHHGDGVQDAF 182
AIN GG HH GFC DI +AI E ++ R ID+D H G+G + F
Sbjct: 106 AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDF 164
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.140 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 285 278 0.00081 115 3 11 22 0.43 33
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 215
No. of states in DFA: 605 (64 KB)
Total size of DFA: 224 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.38u 0.10s 21.48t Elapsed: 00:00:03
Total cpu time: 21.42u 0.10s 21.52t Elapsed: 00:00:03
Start: Thu Aug 15 11:18:28 2013 End: Thu Aug 15 11:18:31 2013
WARNINGS ISSUED: 1