Query psy10344
Match_columns 189
No_of_seqs 89 out of 113
Neff 4.4
Searched_HMMs 29240
Date Fri Aug 16 15:34:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10344.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10344hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2d1l_A Metastasis suppressor p 100.0 1.4E-41 4.9E-46 293.7 10.6 121 2-122 130-253 (253)
2 2ykt_A Brain-specific angiogen 100.0 8.2E-35 2.8E-39 250.6 11.2 121 5-125 123-252 (253)
3 3ok8_A Brain-specific angiogen 99.9 2.2E-24 7.7E-29 183.6 9.0 100 2-105 118-221 (222)
4 2ykt_A Brain-specific angiogen 95.0 0.065 2.2E-06 45.8 7.4 90 2-98 127-232 (253)
5 2fic_A Bridging integrator 1; 87.9 4.8 0.00017 32.6 10.2 85 7-92 148-235 (251)
6 1zww_A SH3-containing GRB2-lik 87.4 3.3 0.00011 34.3 9.0 42 73-114 210-252 (256)
7 1uru_A Amphiphysin; endocytosi 84.7 3.2 0.00011 33.1 7.5 32 62-93 187-223 (244)
8 4a3a_A Amphiphysin; structural 80.4 24 0.00081 29.3 11.7 98 6-104 130-237 (243)
9 2z0v_A SH3-containing GRB2-lik 79.0 8.3 0.00028 31.6 8.1 42 72-113 193-235 (240)
10 4avm_A Bridging integrator 2; 70.1 44 0.0015 27.3 12.0 79 15-94 137-218 (237)
11 2q12_A DIP13 alpha, DCC-intera 67.2 47 0.0016 27.0 9.9 53 38-91 160-213 (265)
12 2efk_A CDC42-interacting prote 58.5 29 0.00099 28.2 7.0 70 52-125 203-272 (301)
13 2v0o_A FCHO2, FCH domain only 58.0 70 0.0024 25.5 10.1 84 37-124 178-261 (276)
14 3ghg_C Fibrinogen gamma chain; 57.4 60 0.0021 29.6 9.5 58 64-121 89-158 (411)
15 3haj_A Human pacsin2 F-BAR; pa 41.0 46 0.0016 29.8 6.0 34 41-74 211-244 (486)
16 2efl_A Formin-binding protein 40.9 85 0.0029 25.3 7.2 79 41-124 198-278 (305)
17 3ghg_A Fibrinogen alpha chain; 34.0 1.2E+02 0.004 28.9 7.6 21 3-23 60-80 (562)
18 3ghg_B Fibrinogen beta chain; 33.0 1.9E+02 0.0064 26.8 8.7 100 2-110 83-197 (461)
19 3aco_A Pacsin2, protein kinase 31.6 1.1E+02 0.0037 25.8 6.6 84 40-126 217-300 (350)
20 2oie_A RS21-C6; helix, hydrola 27.5 1.2E+02 0.0041 21.5 5.3 51 17-67 14-80 (111)
21 3abh_A Pacsin2, protein kinase 24.5 1.1E+02 0.0036 25.2 5.2 83 40-125 217-299 (312)
22 1u2m_A Histone-like protein HL 24.1 19 0.00067 26.8 0.4 25 2-26 29-53 (143)
No 1
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=100.00 E-value=1.4e-41 Score=293.66 Aligned_cols=121 Identities=51% Similarity=0.818 Sum_probs=113.1
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHhhhc---CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc
Q psy10344 2 LKKYKKARSELKKRSTDTLRLQKKVGRK---GVVGRNADLQKALQEVNERKAILEEAEKKALRAALIEERSRYCVFVTFL 78 (189)
Q Consensus 2 ake~Kr~r~ElKkk~~~~~K~QKK~RRK---g~g~~~~~l~~~lqdvs~rq~elee~e~~~lR~ALlEERrRfCflV~~~ 78 (189)
+++||+||+|||+++.+++|+|||+||+ |+++.+++++++|++|++|+.+||+|++++||+|||||||||||||++|
T Consensus 130 ~~~~k~~r~elkk~~~~~~k~qkK~rk~~~~gk~~~~~~l~~a~q~v~~~~~~le~~~~~~~r~AL~EERrRycflv~~l 209 (253)
T 2d1l_A 130 AKEYKKARQEIKKKSSDTLKLQKKAKKVDAQGRGDIQPQLDSALQDVNDKYLLLEETEKQAVRKALIEERGRFCTFISML 209 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCGGGTTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999776 6677778899999999999999999999999999999999999999999
Q ss_pred CcchHHHHHhhhchhHHHHHHHHHHHHhCCCCCCchHHHHHHHH
Q psy10344 79 KPVVDEEVAMLSELSHLQEVMVQLEKHTSDPYSLPPASEQVMAD 122 (189)
Q Consensus 79 ~pVv~~ei~~~~e~~~Lqe~l~~w~~~~~dP~kLP~~seqvI~d 122 (189)
|||+++||+|+++++||+++|++|+++|+||++||+++|+||.|
T Consensus 210 ~pv~~~e~~~~~e~~~l~~~l~~~~~~~~~p~~LP~~se~lI~~ 253 (253)
T 2d1l_A 210 RPVIEEEISMLGEITHLQTISEDLKSLTMDPHKLPSSSEQVILD 253 (253)
T ss_dssp HHHHHHHHGGGGGHHHHHHHHHHHHHHTSCTTSCCGGGCC----
T ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHHHhcCcccCchHHHHhhcC
Confidence 99999999999999999999999999999999999999999986
No 2
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=100.00 E-value=8.2e-35 Score=250.62 Aligned_cols=121 Identities=22% Similarity=0.335 Sum_probs=87.8
Q ss_pred HHHHHHHHhhhhhhHHHHH---HHhhhcCCCCCc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy10344 5 YKKARSELKKRSTDTLRLQ---KKVGRKGVVGRN-----ADLQKALQEVNERKAILEEAEKKALRAALIEERSRYCVFVT 76 (189)
Q Consensus 5 ~Kr~r~ElKkk~~~~~K~Q---KK~RRKg~g~~~-----~~l~~~lqdvs~rq~elee~e~~~lR~ALlEERrRfCflV~ 76 (189)
-|+|..|+|++.++++|++ ||+|||++|+++ ..+++++++|++|+.+||+|++++||+||+||||||||||+
T Consensus 123 ~K~~~~e~k~~~~~l~K~~~e~~kl~KK~k~gk~~~~~~~~~~~~~e~v~~~~~~le~~~~~~lr~aL~EERrRycflv~ 202 (253)
T 2ykt_A 123 LKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVSDGYKTALTEERRRFCFLVE 202 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHhhccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666666666666666 566666554433 45689999999999999999999999999999999999999
Q ss_pred ccCcchHHHHHhhhc-hhHHHHHHHHHHHHhCCCCCCchHHHHHHHHhcC
Q psy10344 77 FLKPVVDEEVAMLSE-LSHLQEVMVQLEKHTSDPYSLPPASEQVMADMKG 125 (189)
Q Consensus 77 ~~~pVv~~ei~~~~e-~~~Lqe~l~~w~~~~~dP~kLP~~seqvI~dlk~ 125 (189)
+||||+++++.+|.. .++|+++||+|+++|+||++||+++|+||.|++.
T Consensus 203 ~~~~v~~~~~~~h~~~~~~L~~~l~~w~~l~~~~~~lP~~se~lI~~~~~ 252 (253)
T 2ykt_A 203 KQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPERAVQLMQQVAS 252 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcChhcCChHHHHHHHHhhc
Confidence 999999999999988 5999999999999999999999999999999974
No 3
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus}
Probab=99.90 E-value=2.2e-24 Score=183.59 Aligned_cols=100 Identities=19% Similarity=0.222 Sum_probs=89.7
Q ss_pred hhHHHHHHHHHhhhhhhHHHHH---HHhhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc
Q psy10344 2 LKKYKKARSELKKRSTDTLRLQ---KKVGRKGVVGRNADLQKALQEVNERKAILEEAEKKALRAALIEERSRYCVFVTFL 78 (189)
Q Consensus 2 ake~Kr~r~ElKkk~~~~~K~Q---KK~RRKg~g~~~~~l~~~lqdvs~rq~elee~e~~~lR~ALlEERrRfCflV~~~ 78 (189)
..+.|+|+.|+|.+++.++|++ ||.|||++ +++ .+++++|+.++.+|+.|++++||+||+|||||||||||+|
T Consensus 118 ~~~~K~y~~e~k~~~~~leK~~~elkK~~rksq--k~~--~k~~e~v~~~q~el~~f~~~s~r~Al~EErRRYcFL~ekh 193 (222)
T 3ok8_A 118 KDSCQHYEIEYRHRAANLEKCMSELWRMERKRD--KNA--REMKESVNRLHAQMQAFVSESKRAAELEEKRRYRFLAEKH 193 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--TTH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhc--cCh--HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999 88888887 333 3489999999999999999999999999999999999999
Q ss_pred CcchHHHHHhhhc-hhHHHHHHHHHHHH
Q psy10344 79 KPVVDEEVAMLSE-LSHLQEVMVQLEKH 105 (189)
Q Consensus 79 ~pVv~~ei~~~~e-~~~Lqe~l~~w~~~ 105 (189)
|.|+.....+|+. .+.|+++||.|++.
T Consensus 194 c~~~~~~~~~h~k~~~~L~~kl~~W~e~ 221 (222)
T 3ok8_A 194 LLLSNTFLQFLGRARGMLQNRVLLWKEQ 221 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHccchhhhhc
Confidence 9999877777776 59999999999874
No 4
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=94.98 E-value=0.065 Score=45.76 Aligned_cols=90 Identities=16% Similarity=0.233 Sum_probs=52.9
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHhhhcCCC-----CCchHHHH-------HHHH---HHHHHHHHHHHHHHHHHHHHHH
Q psy10344 2 LKKYKKARSELKKRSTDTLRLQKKVGRKGVV-----GRNADLQK-------ALQE---VNERKAILEEAEKKALRAALIE 66 (189)
Q Consensus 2 ake~Kr~r~ElKkk~~~~~K~QKK~RRKg~g-----~~~~~l~~-------~lqd---vs~rq~elee~e~~~lR~ALlE 66 (189)
+++||+.+.+++|+..++.|++||. ++|++ +...+..+ .++. -..|...+|+ +.-+.- ||
T Consensus 127 ~~e~k~~~~~l~K~~~e~~kl~KK~-k~gk~~~~~~~~~~~~~e~v~~~~~~le~~~~~~lr~aL~EE--RrRycf-lv- 201 (253)
T 2ykt_A 127 QTEQRSKGDALDKCQAELKKLRKKS-QGSKNPQKYSDKELQYIDAISNKQGELENYVSDGYKTALTEE--RRRFCF-LV- 201 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH-HH-
T ss_pred HHHHHHhHhHHHHHHHHHHHHHhhc-cCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH-HH-
Confidence 6899999999999999999999998 55532 44444322 1111 1123333332 222332 33
Q ss_pred hhhhhhhhhhccCcchHHHHHhhhc-hhHHHHH
Q psy10344 67 ERSRYCVFVTFLKPVVDEEVAMLSE-LSHLQEV 98 (189)
Q Consensus 67 ERrRfCflV~~~~pVv~~ei~~~~e-~~~Lqe~ 98 (189)
.+||-|++....+...-..++.+ +..+++.
T Consensus 202 --~~~~~v~~~~~~~h~~~~~~L~~~l~~w~~l 232 (253)
T 2ykt_A 202 --EKQCAVAKNSAAYHSKGKELLAQKLPLWQQA 232 (253)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 57899999988876555667666 4555544
No 5
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=87.88 E-value=4.8 Score=32.62 Aligned_cols=85 Identities=14% Similarity=0.121 Sum_probs=47.5
Q ss_pred HHHHHHhhhhhhHHHHH---HHhhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCcchH
Q psy10344 7 KARSELKKRSTDTLRLQ---KKVGRKGVVGRNADLQKALQEVNERKAILEEAEKKALRAALIEERSRYCVFVTFLKPVVD 83 (189)
Q Consensus 7 r~r~ElKkk~~~~~K~Q---KK~RRKg~g~~~~~l~~~lqdvs~rq~elee~e~~~lR~ALlEERrRfCflV~~~~pVv~ 83 (189)
+.......|.-|.++++ +|++.|+. .....+.++-+++..-+.++|.+...-..+.=.=.-.|.=||+.++..|+.
T Consensus 148 ~~ikKR~~k~lDyD~~~~~l~kl~~k~~-kd~~kl~kae~el~~ak~~ye~ln~~L~~eLp~l~~~~~~~~~~~l~~f~~ 226 (251)
T 2fic_A 148 SRIAKRGRKLVDYDSARHHYESLQTAKK-KDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAG 226 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333555566554 33433322 122344556666665566666655444444444445566778889999999
Q ss_pred HHHHhhhch
Q psy10344 84 EEVAMLSEL 92 (189)
Q Consensus 84 ~ei~~~~e~ 92 (189)
.++.+|.++
T Consensus 227 ~Q~~f~~~~ 235 (251)
T 2fic_A 227 LEENFHKEM 235 (251)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999884
No 6
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=87.37 E-value=3.3 Score=34.31 Aligned_cols=42 Identities=26% Similarity=0.340 Sum_probs=31.5
Q ss_pred hhhhccCcchHHHHHhhhc-hhHHHHHHHHHHHHhCCCCCCch
Q psy10344 73 VFVTFLKPVVDEEVAMLSE-LSHLQEVMVQLEKHTSDPYSLPP 114 (189)
Q Consensus 73 flV~~~~pVv~~ei~~~~e-~~~Lqe~l~~w~~~~~dP~kLP~ 114 (189)
-++..+..|++-++.||.. .+.|++.++.|.+...++..-|-
T Consensus 210 e~~~~L~~~v~aQl~y~~~~~e~L~~l~~~l~~~~~~~~~~p~ 252 (256)
T 1zww_A 210 EQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQASSQPR 252 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 4457788899999999998 59999999999998888877773
No 7
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=84.69 E-value=3.2 Score=33.13 Aligned_cols=32 Identities=22% Similarity=0.252 Sum_probs=24.6
Q ss_pred HHHHHhhhhhh-----hhhhccCcchHHHHHhhhchh
Q psy10344 62 AALIEERSRYC-----VFVTFLKPVVDEEVAMLSELS 93 (189)
Q Consensus 62 ~ALlEERrRfC-----flV~~~~pVv~~ei~~~~e~~ 93 (189)
+.|.+|=-+|. +|+.++..|+..++.+|.++.
T Consensus 187 ~~L~~eLp~l~~~~~~~~~~~l~~fv~~q~~~~~~~~ 223 (244)
T 1uru_A 187 TELHDELPALYDSRILFLVTNLQTLFATEQVFHNETA 223 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555554 899999999999999999863
No 8
>4a3a_A Amphiphysin; structural genomics, invagination, knobs-IN-holes, curvature membrane, structural genomics consortium; 1.78A {Homo sapiens} PDB: 4atm_A 3sog_A
Probab=80.40 E-value=24 Score=29.25 Aligned_cols=98 Identities=19% Similarity=0.206 Sum_probs=60.3
Q ss_pred HHHHHHHhhh---hhhHHHHH---HHhhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccC
Q psy10344 6 KKARSELKKR---STDTLRLQ---KKVGRKGVVGRNADLQKALQEVNERKAILEEAEKKALRAALIEERSRYCVFVTFLK 79 (189)
Q Consensus 6 Kr~r~ElKkk---~~~~~K~Q---KK~RRKg~g~~~~~l~~~lqdvs~rq~elee~e~~~lR~ALlEERrRfCflV~~~~ 79 (189)
+-.+.-|+|| .-|-++++ +|++.|.. .-...+.++-+++..-+.+.+.+...-..+.=.==..|+=||+.+|+
T Consensus 130 ~~i~k~I~KR~~KllDYD~~~~k~~kL~~K~~-kd~~kl~kae~el~~Ak~~Ye~lN~~L~eELP~l~~~r~~~~~~~~~ 208 (243)
T 4a3a_A 130 PDIKNRIAKRSRKLVDYDSARHHLEALQSSKR-KDESRISKAEEEFQKAQKVFEEFNVDLQEELPSLWSRRVGFYVNTFK 208 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hHHHHHHHHhcchHHHHHHHHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444443 34455555 34433332 22345566667777777777777776655552223467889999999
Q ss_pred cchHHHHHhhhchh----HHHHHHHHHHH
Q psy10344 80 PVVDEEVAMLSELS----HLQEVMVQLEK 104 (189)
Q Consensus 80 pVv~~ei~~~~e~~----~Lqe~l~~w~~ 104 (189)
.|+.-+..++.++. -|.+.|+.+.+
T Consensus 209 s~i~~Q~~f~~e~~k~~~~l~~~~~~~~~ 237 (243)
T 4a3a_A 209 NVSSLEAKFHKEIAVLCHKLYEVMTKLGD 237 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 99999999999964 44455544443
No 9
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=79.03 E-value=8.3 Score=31.57 Aligned_cols=42 Identities=21% Similarity=0.247 Sum_probs=34.1
Q ss_pred hhhhhccCcchHHHHHhhhc-hhHHHHHHHHHHHHhCCCCCCc
Q psy10344 72 CVFVTFLKPVVDEEVAMLSE-LSHLQEVMVQLEKHTSDPYSLP 113 (189)
Q Consensus 72 CflV~~~~pVv~~ei~~~~e-~~~Lqe~l~~w~~~~~dP~kLP 113 (189)
--+++.+..|++-++.||.. .+.|.+..+.|.....+...-|
T Consensus 193 ~e~l~~l~~~v~aQl~y~~~~~e~L~~l~~~l~~~~~~~~~~p 235 (240)
T 2z0v_A 193 VEQVSQLAVFIEAALDYHRQSTEILQELQSKLQMRISAASSVP 235 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45667888899999999998 5999999999988776666555
No 10
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=70.06 E-value=44 Score=27.34 Aligned_cols=79 Identities=20% Similarity=0.239 Sum_probs=50.5
Q ss_pred hhhhHHHHH---HHhhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCcchHHHHHhhhc
Q psy10344 15 RSTDTLRLQ---KKVGRKGVVGRNADLQKALQEVNERKAILEEAEKKALRAALIEERSRYCVFVTFLKPVVDEEVAMLSE 91 (189)
Q Consensus 15 k~~~~~K~Q---KK~RRKg~g~~~~~l~~~lqdvs~rq~elee~e~~~lR~ALlEERrRfCflV~~~~pVv~~ei~~~~e 91 (189)
|.-|-++.+ +|+..|.. +....+.++-+++..-+.+++.+...-..+.=.=---|+=||+.++..|+.-+..++.+
T Consensus 137 kllDyd~~~~~~~kl~~k~~-kd~~kl~kae~el~~a~~~ye~lN~~L~~eLP~l~~~~~~~~~~~~~~~i~~q~~f~~~ 215 (237)
T 4avm_A 137 KLVDYDSARHHLEAVQNAKK-KDEAKTAKAEEEFNKAQTVFEDLNQELLEELPILYNSRIGCYVTIFQNISNLRDVFYRE 215 (237)
T ss_dssp HHHHHHHHHHHHHHHHTCSS-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555 33433322 22345556666666667777777666555552333467889999999999999999998
Q ss_pred hhH
Q psy10344 92 LSH 94 (189)
Q Consensus 92 ~~~ 94 (189)
+..
T Consensus 216 ~~~ 218 (237)
T 4avm_A 216 MSK 218 (237)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 11
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=67.21 E-value=47 Score=26.98 Aligned_cols=53 Identities=6% Similarity=0.092 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhhhhhhhccCcchHHHHHhhhc
Q psy10344 38 LQKALQEVNERKAILEEAEKKALRAA-LIEERSRYCVFVTFLKPVVDEEVAMLSE 91 (189)
Q Consensus 38 l~~~lqdvs~rq~elee~e~~~lR~A-LlEERrRfCflV~~~~pVv~~ei~~~~e 91 (189)
+.++-.++...+...+..-=+.+-.+ .|++|++| .|+..++.+++.++++|+.
T Consensus 160 l~Ea~~~l~~~Rk~f~~~~ldyv~~l~~l~~kk~~-e~le~l~~~~~a~~~ff~~ 213 (265)
T 2q12_A 160 KYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKI-ALLEPLLGYMQAQISFFKM 213 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 44555555555555544444444333 45778888 7777788888888888876
No 12
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=58.51 E-value=29 Score=28.24 Aligned_cols=70 Identities=6% Similarity=-0.015 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhccCcchHHHHHhhhchhHHHHHHHHHHHHhCCCCCCchHHHHHHHHhcC
Q psy10344 52 LEEAEKKALRAALIEERSRYCVFVTFLKPVVDEEVAMLSELSHLQEVMVQLEKHTSDPYSLPPASEQVMADMKG 125 (189)
Q Consensus 52 lee~e~~~lR~ALlEERrRfCflV~~~~pVv~~ei~~~~e~~~Lqe~l~~w~~~~~dP~kLP~~seqvI~dlk~ 125 (189)
+++.....|...=--|..|..||-+.+.-+...+... ...+++.++.+...+.. -....++..+|...++
T Consensus 203 ~~~~~p~~~~~lQ~lee~r~~~lk~~l~~~~~~~~~~---~~~~~~~~~~l~~~~~~-id~~~D~~~fi~~~~~ 272 (301)
T 2efk_A 203 YFSQMPQIFDKLQDMDERRATRLGAGYGLLSEAELEV---VPIIAKCLEGMKVAANA-VDPKNDSHVLIELHKS 272 (301)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHh-cCchhhHHHHHHHcCC
Confidence 3333444444332223345555555544443322221 13344455555444431 1123678888887763
No 13
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=58.04 E-value=70 Score=25.53 Aligned_cols=84 Identities=6% Similarity=0.018 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCcchHHHHHhhhchhHHHHHHHHHHHHhCCCCCCchHH
Q psy10344 37 DLQKALQEVNERKAILEEAEKKALRAALIEERSRYCVFVTFLKPVVDEEVAMLSELSHLQEVMVQLEKHTSDPYSLPPAS 116 (189)
Q Consensus 37 ~l~~~lqdvs~rq~elee~e~~~lR~ALlEERrRfCflV~~~~pVv~~ei~~~~e~~~Lqe~l~~w~~~~~dP~kLP~~s 116 (189)
.+..+++.++.-+..+++.....|...=--|..|..+|-+.+.-+...+-. ....+++.++.....+..- ....++
T Consensus 178 ~Y~~~v~~~n~~~~~~~~~~~~~~~~lQ~le~~R~~~lk~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~i-d~~~D~ 253 (276)
T 2v0o_A 178 TYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKE---IHLQIGQVHEEFINNMANT-TVESLI 253 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHS-CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCccHHHHHHHHHHHHHhC-CHHHHH
Confidence 344566666666777766666666654233344444554443333221111 1123334444443333221 123567
Q ss_pred HHHHHHhc
Q psy10344 117 EQVMADMK 124 (189)
Q Consensus 117 eqvI~dlk 124 (189)
..+|...+
T Consensus 254 ~~fi~~~~ 261 (276)
T 2v0o_A 254 QKFAESKG 261 (276)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcC
Confidence 77787776
No 14
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=57.43 E-value=60 Score=29.57 Aligned_cols=58 Identities=17% Similarity=0.240 Sum_probs=33.4
Q ss_pred HHHhhhhhhhhhhccCcc---hHHHHHhhhc-hhHHHHHHHHHHHHhCCC--------CCCchHHHHHHH
Q psy10344 64 LIEERSRYCVFVTFLKPV---VDEEVAMLSE-LSHLQEVMVQLEKHTSDP--------YSLPPASEQVMA 121 (189)
Q Consensus 64 LlEERrRfCflV~~~~pV---v~~ei~~~~e-~~~Lqe~l~~w~~~~~dP--------~kLP~~seqvI~ 121 (189)
++||..||=.++..+-.- +...+..... +..|.+++..+...|..| ..+|.+..++..
T Consensus 89 ml~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~i~~L~~~v~~l~~~~~~~~~~~~~~~~~~~~dC~~i~~ 158 (411)
T 3ghg_C 89 MLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIAN 158 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCEESCCCCSCCBSSHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCcCCCCCHHHHHh
Confidence 677777776555443221 1211222222 577888888888888765 345666766654
No 15
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=40.99 E-value=46 Score=29.84 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q psy10344 41 ALQEVNERKAILEEAEKKALRAALIEERSRYCVF 74 (189)
Q Consensus 41 ~lqdvs~rq~elee~e~~~lR~ALlEERrRfCfl 74 (189)
+++.++.-+..+++.....|...=--|..|..||
T Consensus 211 ~v~~~n~~~~~y~~~~~~~~~~lQ~lEeeRi~~l 244 (486)
T 3haj_A 211 SLKELDQGTPQYMENMEQVFEQCQQFEEKRLRFF 244 (486)
T ss_dssp HHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444443333333333333
No 16
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=40.91 E-value=85 Score=25.28 Aligned_cols=79 Identities=13% Similarity=0.107 Sum_probs=39.0
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhhhhhccCcchHHHHHhhhc-hhHHHHHHHHHHHHhCCCCCCchHHHH
Q psy10344 41 ALQEVNER-KAILEEAEKKALRAALIEERSRYCVFVTFLKPVVDEEVAMLSE-LSHLQEVMVQLEKHTSDPYSLPPASEQ 118 (189)
Q Consensus 41 ~lqdvs~r-q~elee~e~~~lR~ALlEERrRfCflV~~~~pVv~~ei~~~~e-~~~Lqe~l~~w~~~~~dP~kLP~~seq 118 (189)
+++.++.. ...+++.....+...=--|..|..+|-+.+.-++. +... ...+++..+.+...+..- ..-.++..
T Consensus 198 ~v~~~n~~~~~~~~~~~~~~~~~lQ~le~~r~~~lk~~l~~~~~----~~~~~~~~~~~~~~~l~~~~~~i-d~~~D~~~ 272 (305)
T 2efl_A 198 ILQKFNHEQHEYYHTHIPNIFQKIQEMEERRIVRMGESMKTYAE----VDRQVIPIIGKCLDGIVKAAESI-DQKNDSQL 272 (305)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHTTHHHHHHHHHHHHHHHHHTC-CHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhhHHHHHHHHHHHHHHHhc-CchhhHHH
Confidence 34444443 34455555555554333344455555555444432 1222 244555555555555422 23366777
Q ss_pred HHHHhc
Q psy10344 119 VMADMK 124 (189)
Q Consensus 119 vI~dlk 124 (189)
+|...+
T Consensus 273 fi~~~~ 278 (305)
T 2efl_A 273 VIEAYK 278 (305)
T ss_dssp HHHHHC
T ss_pred HHHHcC
Confidence 888776
No 17
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=33.98 E-value=1.2e+02 Score=28.90 Aligned_cols=21 Identities=10% Similarity=0.164 Sum_probs=14.3
Q ss_pred hHHHHHHHHHhhhhhhHHHHH
Q psy10344 3 KKYKKARSELKKRSTDTLRLQ 23 (189)
Q Consensus 3 ke~Kr~r~ElKkk~~~~~K~Q 23 (189)
+.+++.=+|||...+++.|.-
T Consensus 60 rDltkrINELKnqLEdlsKns 80 (562)
T 3ghg_A 60 QDFTNRINKLKNSLFEYQKNN 80 (562)
T ss_dssp HHHHHHHHHHHHHHTHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhhc
Confidence 456677778887777775544
No 18
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=32.96 E-value=1.9e+02 Score=26.85 Aligned_cols=100 Identities=7% Similarity=0.070 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHH---H--HHHHHHhhhhhhh--h
Q psy10344 2 LKKYKKARSELKKRSTDTLRLQKKVGRKGVVGRNADLQKALQEVNERKAILEEAEKKA---L--RAALIEERSRYCV--F 74 (189)
Q Consensus 2 ake~Kr~r~ElKkk~~~~~K~QKK~RRKg~g~~~~~l~~~lqdvs~rq~elee~e~~~---l--R~ALlEERrRfCf--l 74 (189)
|..+=||+..+++.+++++..=-.+-.+.. ...+++..|.+....-|....+. . -.-+|||..+|=- +
T Consensus 83 ad~L~kye~~V~~dl~~Le~~l~~isn~Ts-----~a~~~v~~ik~s~~~~q~~~~~n~~~~~~s~~mle~~~~~~~~~~ 157 (461)
T 3ghg_B 83 QEALLQQERPIRNSVDELNNNVEAVSQTSS-----SSFQYMYLLKDLWQKRQKQVKDNENVVNEYSSELEKHQLYIDETV 157 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHTHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTHHHHHH
T ss_pred HHHHHhcccchhhHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHhccccCCCCcchhHHHHHHHHHHHHHHHHHhhh
Confidence 455667888887666666553323311111 11223333333333333332222 0 1258889888844 2
Q ss_pred hhccCcchHHHHHhhhc--------hhHHHHHHHHHHHHhCCCC
Q psy10344 75 VTFLKPVVDEEVAMLSE--------LSHLQEVMVQLEKHTSDPY 110 (189)
Q Consensus 75 V~~~~pVv~~ei~~~~e--------~~~Lqe~l~~w~~~~~dP~ 110 (189)
+.. +...|..|.. +..|...+....+.|..|-
T Consensus 158 ~~~----~~~~i~~l~~~~~~~~~~i~~l~~~~~~~~~~c~~pc 197 (461)
T 3ghg_B 158 NSN----IPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPC 197 (461)
T ss_dssp HTH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSBC
T ss_pred hcc----chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCC
Confidence 221 1222333222 5677777777777877665
No 19
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=31.60 E-value=1.1e+02 Score=25.81 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCcchHHHHHhhhchhHHHHHHHHHHHHhCCCCCCchHHHHH
Q psy10344 40 KALQEVNERKAILEEAEKKALRAALIEERSRYCVFVTFLKPVVDEEVAMLSELSHLQEVMVQLEKHTSDPYSLPPASEQV 119 (189)
Q Consensus 40 ~~lqdvs~rq~elee~e~~~lR~ALlEERrRfCflV~~~~pVv~~ei~~~~e~~~Lqe~l~~w~~~~~dP~kLP~~seqv 119 (189)
.+++.++.-+..+++.....|...---|..|+.||-+.+.-+... +.+.. ...+++..+.+...... -....++..+
T Consensus 217 ~~v~~~n~~~~~~~~~~~~~~~~~Q~lee~Rl~~lk~~l~~~~~~-l~~~~-~~~~~~~~~~l~~~i~~-id~~~Di~~f 293 (350)
T 3aco_A 217 KSLKELDQGTPQYMENMEQVFEQCQQFEEKRLRFFREVLLEVQKH-LDLSN-VAGYKAIYHDLEQSIRA-ADAVEDLRWF 293 (350)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCSTT-CHHHHHHHHHHHHHHHT-CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhcc-chhHHHHHHHHHHHHHh-CCHHHHHHHH
Confidence 355556655666777777777766666777877777765555432 22111 12455555555554432 2223678888
Q ss_pred HHHhcCC
Q psy10344 120 MADMKGS 126 (189)
Q Consensus 120 I~dlk~s 126 (189)
|...++.
T Consensus 294 i~~~~tg 300 (350)
T 3aco_A 294 RANHGPG 300 (350)
T ss_dssp HHHTSTT
T ss_pred HHHcCCC
Confidence 8877643
No 20
>2oie_A RS21-C6; helix, hydrolase; 2.20A {Mus musculus} SCOP: a.204.1.2 PDB: 2oig_A*
Probab=27.46 E-value=1.2e+02 Score=21.51 Aligned_cols=51 Identities=18% Similarity=0.044 Sum_probs=27.8
Q ss_pred hhHHHHHHHhhhcCCCCCch---HHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHh
Q psy10344 17 TDTLRLQKKVGRKGVVGRNA---DLQKALQEVNERKAILEEAEK-------------KALRAALIEE 67 (189)
Q Consensus 17 ~~~~K~QKK~RRKg~g~~~~---~l~~~lqdvs~rq~elee~e~-------------~~lR~ALlEE 67 (189)
.++.++||++++-..+.... .....+.-|..-..||.+.++ .+-++.|.||
T Consensus 14 m~~~~lq~~~~~~~~~~dw~~~~~~~~~~~~L~eE~gEl~e~~~~~~~~~~~~~~~~~~~~~~l~eE 80 (111)
T 2oie_A 14 PTLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEE 80 (111)
T ss_dssp SCHHHHHHHHHHHHHTTTCGGGCCHHHHHHHHHHHHHHHHHHHHTCCCCSSCGGGSCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCcccCCHHHHHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHH
Confidence 45778898886632222222 223444555555566655544 4456666666
No 21
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=24.54 E-value=1.1e+02 Score=25.22 Aligned_cols=83 Identities=14% Similarity=0.141 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCcchHHHHHhhhchhHHHHHHHHHHHHhCCCCCCchHHHHH
Q psy10344 40 KALQEVNERKAILEEAEKKALRAALIEERSRYCVFVTFLKPVVDEEVAMLSELSHLQEVMVQLEKHTSDPYSLPPASEQV 119 (189)
Q Consensus 40 ~~lqdvs~rq~elee~e~~~lR~ALlEERrRfCflV~~~~pVv~~ei~~~~e~~~Lqe~l~~w~~~~~dP~kLP~~seqv 119 (189)
.+++.++.-+..+++.....|...---|..|+.||-+.+.-+... +.+. ....+++..+.+...... -....++..+
T Consensus 217 ~~v~~~n~~~~~~~~~~~~~~~~~Q~lee~Rl~~lk~~l~~~~~~-~~~~-~~~~~~~~~~~l~~~i~~-id~~~Di~~f 293 (312)
T 3abh_A 217 KSLKELDQGTPQYMENMEQVFEQCQQFEEKRLRFFREVLLEVQKH-LDLS-NVAGYKAIYHDLEQSIRA-ADAVEDLRWF 293 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCGG-GSTTHHHHHHHHHHHHHT-CCHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhh-ccchHHHHHHHHHHHHHh-CChHHHHHHH
Confidence 355566666666777777777776666777888887766555442 2221 012455555555444432 2234678888
Q ss_pred HHHhcC
Q psy10344 120 MADMKG 125 (189)
Q Consensus 120 I~dlk~ 125 (189)
|...++
T Consensus 294 i~~~~t 299 (312)
T 3abh_A 294 RANHGP 299 (312)
T ss_dssp HHHHST
T ss_pred HHHhCC
Confidence 888763
No 22
>1u2m_A Histone-like protein HLP-1; coiled coil, chaperone; 2.30A {Escherichia coli} SCOP: f.48.1.1 PDB: 1sg2_A
Probab=24.11 E-value=19 Score=26.78 Aligned_cols=25 Identities=32% Similarity=0.355 Sum_probs=0.4
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHh
Q psy10344 2 LKKYKKARSELKKRSTDTLRLQKKV 26 (189)
Q Consensus 2 ake~Kr~r~ElKkk~~~~~K~QKK~ 26 (189)
-++++.++.|++....++.++++++
T Consensus 29 ~~~~~~~~~el~~~~~el~~~~~~l 53 (143)
T 1u2m_A 29 ENEFKGRASELQRMETDLQAKMKKL 53 (143)
T ss_dssp C------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888888888888887776665
Done!