Query psy10345
Match_columns 221
No_of_seqs 156 out of 1407
Neff 8.0
Searched_HMMs 46136
Date Fri Aug 16 15:35:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10345.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10345hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223|consensus 100.0 2.5E-50 5.5E-55 334.1 20.5 202 16-218 5-231 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 1.5E-47 3.3E-52 328.0 21.2 202 17-219 49-279 (296)
3 KOG0224|consensus 100.0 7.8E-47 1.7E-51 316.0 14.3 207 10-217 20-279 (316)
4 PLN00182 putative aquaporin NI 100.0 2.1E-45 4.6E-50 313.0 21.4 194 19-213 39-254 (283)
5 PRK05420 aquaporin Z; Provisio 100.0 7.5E-45 1.6E-49 302.9 21.1 193 22-215 2-230 (231)
6 PLN00026 aquaporin NIP; Provi 100.0 4.9E-45 1.1E-49 312.0 20.2 198 18-216 67-285 (298)
7 PLN00027 aquaporin TIP; Provis 100.0 1.3E-44 2.8E-49 305.0 21.0 200 16-216 14-242 (252)
8 PF00230 MIP: Major intrinsic 100.0 3.5E-45 7.6E-50 304.7 16.3 191 17-208 3-227 (227)
9 PLN00166 aquaporin TIP2; Provi 100.0 3.3E-44 7.1E-49 301.8 21.8 197 17-214 13-238 (250)
10 COG0580 GlpF Glycerol uptake f 100.0 1.2E-44 2.7E-49 299.4 18.2 193 20-213 3-240 (241)
11 PTZ00016 aquaglyceroporin; Pro 100.0 3.8E-44 8.3E-49 307.7 21.7 199 17-216 45-293 (294)
12 PLN00167 aquaporin TIP5; Provi 100.0 6.3E-44 1.4E-48 300.9 21.7 202 16-218 16-245 (256)
13 PLN00183 putative aquaporin NI 100.0 8.3E-43 1.8E-47 296.1 20.8 201 17-218 40-261 (274)
14 cd00333 MIP Major intrinsic pr 100.0 3.1E-40 6.7E-45 275.2 18.3 188 23-211 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 2.2E-38 4.8E-43 262.1 17.2 181 27-208 1-216 (216)
16 cd00333 MIP Major intrinsic pr 99.5 3.5E-14 7.6E-19 118.4 9.3 98 18-117 126-225 (228)
17 PLN00182 putative aquaporin NI 99.5 4.8E-14 1E-18 120.6 9.8 97 20-122 157-253 (283)
18 PLN00184 aquaporin NIP1; Provi 99.5 4.9E-14 1.1E-18 121.3 7.1 90 125-214 53-156 (296)
19 TIGR00861 MIP MIP family chann 99.5 1.8E-13 3.8E-18 113.3 8.8 96 19-116 119-215 (216)
20 PLN00026 aquaporin NIP; Provi 99.4 3.9E-13 8.4E-18 115.6 8.9 96 20-121 185-280 (298)
21 PLN00183 putative aquaporin NI 99.4 4E-13 8.8E-18 114.5 8.8 96 21-122 160-255 (274)
22 PLN00166 aquaporin TIP2; Provi 99.4 1.1E-12 2.3E-17 110.7 6.3 90 125-214 17-125 (250)
23 PRK05420 aquaporin Z; Provisio 99.3 4.9E-12 1.1E-16 105.7 7.2 88 126-213 2-104 (231)
24 PLN00167 aquaporin TIP5; Provi 99.3 5.6E-12 1.2E-16 106.7 7.5 90 125-214 21-129 (256)
25 PTZ00016 aquaglyceroporin; Pro 99.3 3.5E-12 7.6E-17 110.0 5.7 90 125-214 49-152 (294)
26 PLN00027 aquaporin TIP; Provis 99.3 7.3E-12 1.6E-16 105.9 6.7 89 125-213 19-126 (252)
27 COG0580 GlpF Glycerol uptake f 99.2 3E-11 6.6E-16 100.6 6.1 94 126-219 5-115 (241)
28 KOG0223|consensus 99.2 2.1E-11 4.5E-16 101.7 4.0 99 17-122 127-225 (238)
29 KOG0224|consensus 99.1 5.5E-11 1.2E-15 100.7 4.6 90 125-214 31-135 (316)
30 PF00230 MIP: Major intrinsic 98.9 1.1E-08 2.5E-13 85.0 9.5 96 18-116 131-226 (227)
31 COG2116 FocA Formate/nitrite f 95.1 1.8 3.9E-05 36.9 15.7 164 53-220 63-265 (265)
32 PRK11562 nitrite transporter N 94.3 0.78 1.7E-05 39.3 10.9 60 55-117 59-119 (268)
33 PRK10805 formate transporter; 90.2 8.8 0.00019 33.2 12.4 60 55-117 69-132 (285)
34 PRK09713 focB putative formate 82.7 31 0.00067 29.8 13.2 60 55-117 68-131 (282)
35 TIGR00790 fnt formate/nitrite 77.9 40 0.00087 28.2 12.3 59 56-117 45-104 (239)
36 PF01226 Form_Nir_trans: Forma 72.6 33 0.00071 29.0 8.8 63 53-117 56-118 (250)
37 PF04632 FUSC: Fusaric acid re 71.1 70 0.0015 30.4 11.7 119 80-215 370-493 (650)
38 PRK10631 p-hydroxybenzoic acid 61.4 93 0.002 30.2 10.3 119 77-212 380-502 (652)
39 PF03033 Glyco_transf_28: Glyc 55.1 4 8.6E-05 30.3 -0.0 20 74-93 6-25 (139)
40 COG1289 Predicted membrane pro 53.7 1.8E+02 0.004 28.1 11.1 103 58-165 362-470 (674)
41 PF09512 ThiW: Thiamine-precur 50.6 87 0.0019 24.4 6.7 64 16-121 84-147 (150)
42 PRK12446 undecaprenyldiphospho 44.4 6.3 0.00014 34.8 -0.4 22 71-92 6-27 (352)
43 KOG1330|consensus 38.9 2E+02 0.0044 26.9 8.3 29 188-216 186-214 (493)
44 COG0730 Predicted permeases [G 34.8 2.6E+02 0.0057 23.1 8.4 50 87-137 64-113 (258)
45 PRK15071 lipopolysaccharide AB 24.0 2.5E+02 0.0053 24.5 6.2 59 27-85 276-336 (356)
46 PF14241 DUF4341: Domain of un 20.5 98 0.0021 20.1 2.2 54 148-203 7-60 (62)
No 1
>KOG0223|consensus
Probab=100.00 E-value=2.5e-50 Score=334.06 Aligned_cols=202 Identities=36% Similarity=0.528 Sum_probs=185.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-CCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCc
Q psy10345 16 TFIHRALEICLAEILGTFGLMFFGCMSCIGGFS-QGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDI 94 (221)
Q Consensus 16 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~ 94 (221)
....+.+|++++||++|++++|++|++...... ....+.+.+++.+|+++++.+++++++||||+|||||+++++.|++
T Consensus 5 ~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~i 84 (238)
T KOG0223|consen 5 LLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKI 84 (238)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCC
Confidence 345677999999999999999999998886542 3255678899999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhccch-----------------hHHHHHHHHHHhH-hhhc------ccCCCCcHH
Q psy10345 95 SVADALVYVMAQLIGAVLGYATLGHHGIPM-----------------LWQSEVLKFIFPW-LNLV------EVEVTGGGG 150 (221)
Q Consensus 95 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-----------------~~~~~~~E~~~t~-Lv~~------~~~~~~~~~ 150 (221)
++.+++.|+++|++|+++|+.++ +.+.|. ..|+++.|++.|+ |+++ +++++.+.|
T Consensus 85 sl~~~~~Y~vaQ~lGa~~g~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~~~a~ 163 (238)
T KOG0223|consen 85 SLFRAVAYIVAQLLGAIAGAALL-KVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRSELAP 163 (238)
T ss_pred cHHHhHHHHHHHHHHHHHHHHHH-heecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCcccHH
Confidence 99999999999999999999999 888754 8899999999999 9998 566669999
Q ss_pred HHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcCcccc
Q psy10345 151 VGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFERKRLE 218 (221)
Q Consensus 151 ~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~~ 218 (221)
+.||+++.+.++..+++||++|||||+|||++..++|+++|+||++|++|+++++++|+.++.+++.|
T Consensus 164 l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~~~~ 231 (238)
T KOG0223|consen 164 LAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPDESE 231 (238)
T ss_pred HHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999998877433
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=1.5e-47 Score=328.00 Aligned_cols=202 Identities=30% Similarity=0.463 Sum_probs=177.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC-CCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcc
Q psy10345 17 FIHRALEICLAEILGTFGLMFFGCMSCIGGFSQG-SVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDIS 95 (221)
Q Consensus 17 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~-~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~ 95 (221)
...+.+|++++||+||++|+|+++++.......+ ..+...++++||+++++.+++++++||||+|||||++.++.|+++
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~ 128 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFP 128 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCC
Confidence 3446889999999999999999998876433221 235677899999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhccch--------------------hHHHHHHHHHHhH-hhhc------c-cCCCC
Q psy10345 96 VADALVYVMAQLIGAVLGYATLGHHGIPM--------------------LWQSEVLKFIFPW-LNLV------E-VEVTG 147 (221)
Q Consensus 96 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--------------------~~~~~~~E~~~t~-Lv~~------~-~~~~~ 147 (221)
|.+.+.|+++|++||++|+.++ +.+++. ..++++.|+++|+ |+++ + +....
T Consensus 129 ~~~~~~YiiaQllGA~lga~~~-~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~~~ 207 (296)
T PLN00184 129 LKQVPAYVISQVIGSTLAAATL-RLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAIGE 207 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCCCc
Confidence 9999999999999999999998 777631 5679999999999 8887 2 22335
Q ss_pred cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcCccccc
Q psy10345 148 GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFERKRLEK 219 (221)
Q Consensus 148 ~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~~~ 219 (221)
..|+.||+.+.+.++..+++||++|||||||||+++.+.|+++|+||++|++|+++++++|+++..++++.+
T Consensus 208 ~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~~ 279 (296)
T PLN00184 208 LAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPLR 279 (296)
T ss_pred chHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCcch
Confidence 789999999999999999999999999999999999999999999999999999999999999987665544
No 3
>KOG0224|consensus
Probab=100.00 E-value=7.8e-47 Score=316.01 Aligned_cols=207 Identities=28% Similarity=0.322 Sum_probs=183.8
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccC--CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHH
Q psy10345 10 TSQDRCTFIHRALEICLAEILGTFGLMFFGCMSCIGGFSQ--GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVA 87 (221)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~--~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla 87 (221)
+.+.+....+++.|++++||+||++|++++++++.+...+ ..++...+.++||+++++.+++.+++||||+|||||++
T Consensus 20 ~~~~~~~i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a 99 (316)
T KOG0224|consen 20 RLRAKLHIRNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLA 99 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHH
Confidence 3344556678899999999999999999999999987644 35677889999999999999999999999999999999
Q ss_pred HHHhcCcchhhHHHHHHHHHHHHHHHHHHhhhhccch-------------------------------hHHHHHHHHHHh
Q psy10345 88 AFMLGDISVADALVYVMAQLIGAVLGYATLGHHGIPM-------------------------------LWQSEVLKFIFP 136 (221)
Q Consensus 88 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-------------------------------~~~~~~~E~~~t 136 (221)
+++.||++|+|.+.|+++|++||++|++.+ |..+.+ ..++|+.|+++|
T Consensus 100 ~~~~g~~p~~k~p~Y~~aQ~iGAF~gaa~~-y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigT 178 (316)
T KOG0224|consen 100 MCILGRLPWKKFPVYVLAQFIGAFLGAATV-YGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGT 178 (316)
T ss_pred HHHhcCCChhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHH
Confidence 999999999999999999999999999999 988754 789999999999
Q ss_pred H-hhhc-----cc---CCCCcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-----------cccceeecchh
Q psy10345 137 W-LNLV-----EV---EVTGGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-----------IWTKQWIYWTA 196 (221)
Q Consensus 137 ~-Lv~~-----~~---~~~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-----------~~~~~wvy~~~ 196 (221)
. |+.+ ++ -.+++.|+.+|+.+.++.+..+..+|..+||||||+||++.. .-.|+|++|++
T Consensus 179 a~L~~~l~aI~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivg 258 (316)
T KOG0224|consen 179 AMLVLCLFAITDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVG 258 (316)
T ss_pred HHHHhheeEEecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehh
Confidence 9 8877 33 345799999999999999999999999999999999999941 11588999999
Q ss_pred hhHHHHHHHHHHHHhhcCccc
Q psy10345 197 PTLAGTVTPLIYTYAFERKRL 217 (221)
Q Consensus 197 p~~Ga~la~~~~~~~~~~~~~ 217 (221)
|++|+++++++|.+++..+.+
T Consensus 259 Pl~Gai~G~~iY~~~Ig~h~~ 279 (316)
T KOG0224|consen 259 PLIGAILGGWIYDFFIGFHIP 279 (316)
T ss_pred hhhhhhhhhhhheeeeeccCC
Confidence 999999999999998765544
No 4
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=2.1e-45 Score=312.99 Aligned_cols=194 Identities=28% Similarity=0.407 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccC-CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchh
Q psy10345 19 HRALEICLAEILGTFGLMFFGCMSCIGGFSQ-GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVA 97 (221)
Q Consensus 19 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~ 97 (221)
.+++|++++||+||++|+|+++++....... ...+...+++++|+++++.+++++++||||+|||||++.++.|+++|.
T Consensus 39 ~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~ 118 (283)
T PLN00182 39 VCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWY 118 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHH
Confidence 4678999999999999999999977643221 123456678899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhccch-------------hHHHHHHHHHHhH-hhhc------cc-CCCCcHHHHHHHH
Q psy10345 98 DALVYVMAQLIGAVLGYATLGHHGIPM-------------LWQSEVLKFIFPW-LNLV------EV-EVTGGGGVGSIAT 156 (221)
Q Consensus 98 ~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-------------~~~~~~~E~~~t~-Lv~~------~~-~~~~~~~~~ig~~ 156 (221)
+.+.|+++|++|+++|++++ +.+++. ..++++.|+++|+ |+++ ++ ......++.+|+.
T Consensus 119 ~~~~Yi~aQ~lGa~~ga~~~-~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~~~~~~l~iGl~ 197 (283)
T PLN00182 119 QVPLYIGAQLTGSLLASLTL-RLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAVGELAGIAVGMT 197 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccCCcchhHHHHHH
Confidence 99999999999999999998 876632 5689999999999 8876 22 2234689999999
Q ss_pred HHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhc
Q psy10345 157 YYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFE 213 (221)
Q Consensus 157 v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~ 213 (221)
+.+.++..+++||+++||||+++|++..+.|+++|+||++|++|+++++++|+++..
T Consensus 198 V~~~~~~~g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 198 IILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred HHHHHHHccccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999874
No 5
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=7.5e-45 Score=302.88 Aligned_cols=193 Identities=28% Similarity=0.439 Sum_probs=169.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccC--CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhH
Q psy10345 22 LEICLAEILGTFGLMFFGCMSCIGGFSQ--GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADA 99 (221)
Q Consensus 22 ~~~~~~EfigT~~lv~~~~~~~~~~~~~--~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~ 99 (221)
+|++++||+||++++|+++++....+.. ...+.+..++++|+++++.+++++++||+|+|||||++.++.|++++++.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 6899999999999999999976542211 12345678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccch-------------------------hHHHHHHHHHHhH-hhhc-----c-cCCCC
Q psy10345 100 LVYVMAQLIGAVLGYATLGHHGIPM-------------------------LWQSEVLKFIFPW-LNLV-----E-VEVTG 147 (221)
Q Consensus 100 ~~yi~aQ~~Ga~~g~~~~~~~~~~~-------------------------~~~~~~~E~~~t~-Lv~~-----~-~~~~~ 147 (221)
+.|+++|++||++|+.++ +.+++. ..++++.|+++|+ |+++ + ++...
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~ 160 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVL-YLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDKRAPAG 160 (231)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 999999999999999988 765421 3578999999999 8887 3 23345
Q ss_pred cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcc--cceeecchhhhHHHHHHHHHHHHhhcCc
Q psy10345 148 GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIW--TKQWIYWTAPTLAGTVTPLIYTYAFERK 215 (221)
Q Consensus 148 ~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~--~~~wvy~~~p~~Ga~la~~~~~~~~~~~ 215 (221)
..|+.+|+.+....+..+++||++||||||+||++++++| +++|+||++|++|+++++++|+++++++
T Consensus 161 ~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 161 FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 7899999999999999999999999999999999998866 5899999999999999999999997665
No 6
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=4.9e-45 Score=312.02 Aligned_cols=198 Identities=31% Similarity=0.351 Sum_probs=173.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccC-CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcch
Q psy10345 18 IHRALEICLAEILGTFGLMFFGCMSCIGGFSQ-GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISV 96 (221)
Q Consensus 18 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~ 96 (221)
..+++|++++||+||++|+|++++........ ...+.+.+++++|+++++.+++++++||||+|||||++.++.|+++|
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~ 146 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPW 146 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcH
Confidence 34678999999999999999999765432111 12356667899999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccch------------hHHHHHHHHHHhH-hhhc------ccC-CCCcHHHHHHHH
Q psy10345 97 ADALVYVMAQLIGAVLGYATLGHHGIPM------------LWQSEVLKFIFPW-LNLV------EVE-VTGGGGVGSIAT 156 (221)
Q Consensus 97 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~------------~~~~~~~E~~~t~-Lv~~------~~~-~~~~~~~~ig~~ 156 (221)
.+.+.|+++|++|+++|+.++ +.++++ ..++++.|+++|+ |+++ +++ .+...++.+|+.
T Consensus 147 ~~~~~YiiaQilGAi~aa~~~-~~~~~~~~~~g~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~~~~~~l~iGl~ 225 (298)
T PLN00026 147 KHVPAYIAAQVSASICASFAL-KGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGAT 225 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhcccccCceeeecccHHHHHHHHHHHHHHHHHhheeeecCCCCcCCccchHHHHH
Confidence 999999999999999999999 877643 5689999999999 8877 222 234678999999
Q ss_pred HHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcCcc
Q psy10345 157 YYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFERKR 216 (221)
Q Consensus 157 v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~ 216 (221)
+.+.++..+++||+++||||||+|++..++|+++|+||++|++|+++++++|+.+..+++
T Consensus 226 V~~~~l~~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~ 285 (298)
T PLN00026 226 VMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREE 285 (298)
T ss_pred HHHHHHHhcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999999999999999999999999999999999999865554
No 7
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=1.3e-44 Score=305.05 Aligned_cols=200 Identities=27% Similarity=0.448 Sum_probs=175.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc---cC--C-CCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHH
Q psy10345 16 TFIHRALEICLAEILGTFGLMFFGCMSCIGGF---SQ--G-SVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAF 89 (221)
Q Consensus 16 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~---~~--~-~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~ 89 (221)
...++.+|++++||+||++++++++++....+ .. + ..+.+..++++|+++.+.++.++++||+|+|||+|++.+
T Consensus 14 ~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~ 93 (252)
T PLN00027 14 ASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAF 93 (252)
T ss_pred hhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHH
Confidence 34567899999999999999999999865321 11 1 234567899999999999999999999999999999999
Q ss_pred HhcCcchhhHHHHHHHHHHHHHHHHHHhhhhccch-------------hHHHHHHHHHHhH-hhhc------ccCC---C
Q psy10345 90 MLGDISVADALVYVMAQLIGAVLGYATLGHHGIPM-------------LWQSEVLKFIFPW-LNLV------EVEV---T 146 (221)
Q Consensus 90 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-------------~~~~~~~E~~~t~-Lv~~------~~~~---~ 146 (221)
+.|++++.+.+.|+++|++||++|+.+. +.+.++ ..++++.|+++|+ |+++ ++++ .
T Consensus 94 ~~g~~~~~~~~~yi~aQ~lGa~~ga~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~ 172 (252)
T PLN00027 94 IGGNITLLRGILYWIAQLLGSVVACLLL-KFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLG 172 (252)
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHH-HHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCcc
Confidence 9999999999999999999999999998 766533 6789999999999 8886 2222 2
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcCcc
Q psy10345 147 GGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFERKR 216 (221)
Q Consensus 147 ~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~ 216 (221)
...|+.+|+.+...++..+++||+++||||++||+++.++|+++|+||++|++|+++++++|++++.+++
T Consensus 173 ~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~~ 242 (252)
T PLN00027 173 IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIGST 242 (252)
T ss_pred chHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999986544
No 8
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=3.5e-45 Score=304.71 Aligned_cols=191 Identities=38% Similarity=0.561 Sum_probs=167.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC-------CCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHH
Q psy10345 17 FIHRALEICLAEILGTFGLMFFGCMSCIGGFSQG-------SVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAF 89 (221)
Q Consensus 17 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~-------~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~ 89 (221)
++.+++|++++||+||++++|+++++........ ..+...+++++|+++++.++.++++||+|+||+||++.+
T Consensus 3 ~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~ 82 (227)
T PF00230_consen 3 KSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFA 82 (227)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhhee
Confidence 3567799999999999999999998666332211 124567899999999999999999999999999999999
Q ss_pred HhcCcchhhHHHHHHHHHHHHHHHHHHhhhhccch-----------------hHHHHHHHHHHhH-hhhc-----ccC-C
Q psy10345 90 MLGDISVADALVYVMAQLIGAVLGYATLGHHGIPM-----------------LWQSEVLKFIFPW-LNLV-----EVE-V 145 (221)
Q Consensus 90 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-----------------~~~~~~~E~~~t~-Lv~~-----~~~-~ 145 (221)
+.|++++++.+.|+++|++|+++|+.++ +.++++ ..++++.|+++|+ |+++ +++ .
T Consensus 83 l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~ 161 (227)
T PF00230_consen 83 LTGRISWKKAIVYIIAQFLGAFLGALLV-YALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRK 161 (227)
T ss_dssp HTTSSSHHHHHHHHHHHHHHHHHHHHHH-HHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSS
T ss_pred eeeeecccceeeEEeeccccccccccch-hhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcccccc
Confidence 9999999999999999999999999999 887754 6789999999999 8877 222 1
Q ss_pred ---CCcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHH
Q psy10345 146 ---TGGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIY 208 (221)
Q Consensus 146 ---~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~ 208 (221)
+...|+.+|+.+....+..+++||+++||||+++|+++.+.|+++|+||++|++|+++++++|
T Consensus 162 ~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 162 FPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp STSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred cccccccceeEEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 236899999999999999999999999999999999999999999999999999999999987
No 9
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=3.3e-44 Score=301.81 Aligned_cols=197 Identities=26% Similarity=0.409 Sum_probs=173.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-c--cC---CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHH
Q psy10345 17 FIHRALEICLAEILGTFGLMFFGCMSCIGG-F--SQ---GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFM 90 (221)
Q Consensus 17 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~-~--~~---~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l 90 (221)
...+.+|++++||+||++++|+++++..+. + +. ...+.+..++++|+.+++.+++++++||+|+|||+|++.++
T Consensus 13 ~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l 92 (250)
T PLN00166 13 FSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAI 92 (250)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 346778999999999999999999986642 1 11 12346678999999999999999999999999999999999
Q ss_pred hcCcchhhHHHHHHHHHHHHHHHHHHhhhhccch-------------hHHHHHHHHHHhH-hhhc------ccCC---CC
Q psy10345 91 LGDISVADALVYVMAQLIGAVLGYATLGHHGIPM-------------LWQSEVLKFIFPW-LNLV------EVEV---TG 147 (221)
Q Consensus 91 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-------------~~~~~~~E~~~t~-Lv~~------~~~~---~~ 147 (221)
.|++++.+.+.|+++|++|+++|+.+. +.++++ ..++++.|+++|+ |+++ +++. +.
T Consensus 93 ~g~~~~~~~~~y~~aq~lGa~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~~ 171 (250)
T PLN00166 93 GGNITIITGFFYWIAQCLGSIVACLLL-VFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGT 171 (250)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHH-HHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 999999999999999999999999999 776542 5689999999999 8886 2221 24
Q ss_pred cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcC
Q psy10345 148 GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFER 214 (221)
Q Consensus 148 ~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~ 214 (221)
..|+.+|+.+...++..+++||++|||||+|||+++.++|+++|+||++|++|+++++++|+.++.+
T Consensus 172 ~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~~ 238 (250)
T PLN00166 172 IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIG 238 (250)
T ss_pred chhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999999999999999999999999999999999999987543
No 10
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-44 Score=299.40 Aligned_cols=193 Identities=31% Similarity=0.351 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc--c--CCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcc
Q psy10345 20 RALEICLAEILGTFGLMFFGCMSCIGGF--S--QGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDIS 95 (221)
Q Consensus 20 ~~~~~~~~EfigT~~lv~~~~~~~~~~~--~--~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~ 95 (221)
+..|++++||+||++|+++++++..... . +....+..++++||+++++.++..+++||+|+|||||+++++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 3457789999999999999999888654 2 22567777999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhccch------------------------hHHHHHHHHHHhH-hhhc-----ccC-
Q psy10345 96 VADALVYVMAQLIGAVLGYATLGHHGIPM------------------------LWQSEVLKFIFPW-LNLV-----EVE- 144 (221)
Q Consensus 96 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~------------------------~~~~~~~E~~~t~-Lv~~-----~~~- 144 (221)
|++++.||++|++||++|+.++ +.+++. ..++++.|+++|+ |++. +++
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~-~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~ 161 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALL-YLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGN 161 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 9999999999999999999999 887643 4789999999999 8887 222
Q ss_pred -CCCcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC---------cccceeecchhhhHHHHHHHHHHHHhhc
Q psy10345 145 -VTGGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN---------IWTKQWIYWTAPTLAGTVTPLIYTYAFE 213 (221)
Q Consensus 145 -~~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~---------~~~~~wvy~~~p~~Ga~la~~~~~~~~~ 213 (221)
+.+..|+.+|+.+...++..++.||.++|||||+||++... ++.|+|+||++|++|+++++++|+.++.
T Consensus 162 ~~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 162 ANAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred ccccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 23599999999999999999999999999999999999642 2358999999999999999999998764
No 11
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=3.8e-44 Score=307.66 Aligned_cols=199 Identities=24% Similarity=0.286 Sum_probs=173.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC-CCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcc
Q psy10345 17 FIHRALEICLAEILGTFGLMFFGCMSCIGGFSQG-SVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDIS 95 (221)
Q Consensus 17 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~-~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~ 95 (221)
..++++|++++||+||++++|+++++..+..... ..+....++++|+++.+.+++++++||+|+|||||++.++.|+++
T Consensus 45 ~~~~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~ 124 (294)
T PTZ00016 45 EYRPNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFP 124 (294)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCC
Confidence 4477889999999999999999999876533211 245667899999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhccch------------------------------hHHHHHHHHHHhH-hhhc---
Q psy10345 96 VADALVYVMAQLIGAVLGYATLGHHGIPM------------------------------LWQSEVLKFIFPW-LNLV--- 141 (221)
Q Consensus 96 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~------------------------------~~~~~~~E~~~t~-Lv~~--- 141 (221)
|.+.+.|+++|++||++|++++ +.++++ ..++++.|+++|+ |+++
T Consensus 125 ~~~~~~YiiaQ~lGa~~ga~ll-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila 203 (294)
T PTZ00016 125 WKKLPGYFVAQLLGAFVGAACV-YGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILA 203 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 887643 2578999999999 8887
Q ss_pred --ccCC---CCcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhcccc------Cccc----ceeecchhhhHHHHHHHH
Q psy10345 142 --EVEV---TGGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFIN------NIWT----KQWIYWTAPTLAGTVTPL 206 (221)
Q Consensus 142 --~~~~---~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~------~~~~----~~wvy~~~p~~Ga~la~~ 206 (221)
++++ ....|+.||+.+.++.+..+++||+++||||||||+++. ..|+ |+|+||++|++|++++++
T Consensus 204 ~~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aal 283 (294)
T PTZ00016 204 ITDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMF 283 (294)
T ss_pred hccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHHH
Confidence 3222 346899999999999999999999999999999999986 2454 689999999999999999
Q ss_pred HHHHhhcCcc
Q psy10345 207 IYTYAFERKR 216 (221)
Q Consensus 207 ~~~~~~~~~~ 216 (221)
+|++++.++.
T Consensus 284 ly~~ll~~~~ 293 (294)
T PTZ00016 284 LYDKFIPPLI 293 (294)
T ss_pred HHHHHhCCCC
Confidence 9999987764
No 12
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=6.3e-44 Score=300.87 Aligned_cols=202 Identities=25% Similarity=0.360 Sum_probs=176.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---C---CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHH
Q psy10345 16 TFIHRALEICLAEILGTFGLMFFGCMSCIGGFS---Q---GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAF 89 (221)
Q Consensus 16 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~---~---~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~ 89 (221)
...++.+|++++||+||++++++++++..+... . ...+++.+++.+|+++++.+++++++||+|+|||+|++.+
T Consensus 16 ~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~ 95 (256)
T PLN00167 16 SVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMA 95 (256)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHH
Confidence 346778999999999999999999998774321 1 1235678999999999999999999999999999999999
Q ss_pred HhcCcchhhHHHHHHHHHHHHHHHHHHhhhhccch-------------hHHHHHHHHHHhH-hhhc-----ccCC---CC
Q psy10345 90 MLGDISVADALVYVMAQLIGAVLGYATLGHHGIPM-------------LWQSEVLKFIFPW-LNLV-----EVEV---TG 147 (221)
Q Consensus 90 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-------------~~~~~~~E~~~t~-Lv~~-----~~~~---~~ 147 (221)
+.|+++|++.+.|+++|++|+++|+.+. +.++++ ..++++.|+++|+ |+++ ++++ +.
T Consensus 96 ~~g~~~~~~~~~yi~aQ~lGa~~ga~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~~~ 174 (256)
T PLN00167 96 VGGHISVPTAMFYWISQMLASVMACLFL-KVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLLGA 174 (256)
T ss_pred HhCCCcHhhhhHHHHHHHHHHHHHHHHH-HHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCCCC
Confidence 9999999999999999999999999998 776532 4578999999999 8876 3222 24
Q ss_pred cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcCcccc
Q psy10345 148 GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFERKRLE 218 (221)
Q Consensus 148 ~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~~ 218 (221)
..|+.+|+.+....+..+++||+++||||||||+++.+.|+++|+||++|++|+++++++|++++.++.++
T Consensus 175 ~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~~~ 245 (256)
T PLN00167 175 IGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQDD 245 (256)
T ss_pred cchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 68999999999999999999999999999999999999999999999999999999999999998765543
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=8.3e-43 Score=296.08 Aligned_cols=201 Identities=28% Similarity=0.369 Sum_probs=175.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccC-CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcc
Q psy10345 17 FIHRALEICLAEILGTFGLMFFGCMSCIGGFSQ-GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDIS 95 (221)
Q Consensus 17 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~ 95 (221)
...+.+|++++||++|++++|+++++....... ...+....++.+|+++++.+++++++||+|+|||+|++.++.|+++
T Consensus 40 ~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~ 119 (274)
T PLN00183 40 MDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFP 119 (274)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCCC
Confidence 455788999999999999999999876643321 1234556788999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhccch------------hHHHHHHHHHHhH-hhhc-----cc--CCCCcHHHHHHH
Q psy10345 96 VADALVYVMAQLIGAVLGYATLGHHGIPM------------LWQSEVLKFIFPW-LNLV-----EV--EVTGGGGVGSIA 155 (221)
Q Consensus 96 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~------------~~~~~~~E~~~t~-Lv~~-----~~--~~~~~~~~~ig~ 155 (221)
|.+.+.|+++|++|+++|+.++ +.+++. ..++++.|+++|+ |++. ++ +.....++.+|+
T Consensus 120 ~~~~~~Yi~aQ~lGa~~ga~l~-~~~~~~~~~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~~~~~l~iGl 198 (274)
T PLN00183 120 WSKVPLYITAQTVGSVLATYVG-VSVYGVKADLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLGHLSGFVIGI 198 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhcCCcccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCCCCceehHHHH
Confidence 9999999999999999999997 766532 5688999999999 8876 21 233467899999
Q ss_pred HHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcCcccc
Q psy10345 156 TYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFERKRLE 218 (221)
Q Consensus 156 ~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~~ 218 (221)
.+.+.++..+++||+++||||+++|++.+.+|+++|+||++|++|+++++++|++++.+..+.
T Consensus 199 ~v~~~v~~~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~~~ 261 (274)
T PLN00183 199 AIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQPC 261 (274)
T ss_pred HHHHHHHhccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 999999999999999999999999999998999999999999999999999999998776543
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=3.1e-40 Score=275.24 Aligned_cols=188 Identities=36% Similarity=0.563 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCC--CCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhHH
Q psy10345 23 EICLAEILGTFGLMFFGCMSCIGGFSQG--SVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADAL 100 (221)
Q Consensus 23 ~~~~~EfigT~~lv~~~~~~~~~~~~~~--~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~~ 100 (221)
|++++||+||+++++.++++..+....+ ..+....++.+|+++...+++++++||+|+|||+|++.++.|+++|.+.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 5788999999999999999877544221 23456789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccch-------------------------hHHHHHHHHHHhH-hhhc-----ccC----C
Q psy10345 101 VYVMAQLIGAVLGYATLGHHGIPM-------------------------LWQSEVLKFIFPW-LNLV-----EVE----V 145 (221)
Q Consensus 101 ~yi~aQ~~Ga~~g~~~~~~~~~~~-------------------------~~~~~~~E~~~t~-Lv~~-----~~~----~ 145 (221)
.|+++|++|+++|+.+. +.++++ ..+.++.|+++|+ |++. +++ .
T Consensus 81 ~y~~aq~~Ga~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~ 159 (228)
T cd00333 81 PYIIAQLLGAILGAALL-YGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPP 159 (228)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCCC
Confidence 99999999999999998 776533 4468999999999 8887 221 3
Q ss_pred CCcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCc---ccceeecchhhhHHHHHHHHHHHHh
Q psy10345 146 TGGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNI---WTKQWIYWTAPTLAGTVTPLIYTYA 211 (221)
Q Consensus 146 ~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~---~~~~wvy~~~p~~Ga~la~~~~~~~ 211 (221)
....++.+|+.+....+..+++||+++|||||+++++.++. |+++|+||++|++|+++++++|+++
T Consensus 160 ~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 160 GGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred CCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 34789999999999999999999999999999999999875 9999999999999999999999864
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=2.2e-38 Score=262.07 Aligned_cols=181 Identities=38% Similarity=0.564 Sum_probs=158.9
Q ss_pred HHHHHHHHHHHHHHHHhhccccC----CC--CCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhHH
Q psy10345 27 AEILGTFGLMFFGCMSCIGGFSQ----GS--VPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADAL 100 (221)
Q Consensus 27 ~EfigT~~lv~~~~~~~~~~~~~----~~--~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~~ 100 (221)
+||+||++++++++++..+.... .. .+....++++|+.+...+++++++||+|+|||+|++.++.|++++.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 59999999999999987752211 11 1456789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccch-----------------hHHHHHHHHHHhH-hhhc-----ccCC----CCcHHHHH
Q psy10345 101 VYVMAQLIGAVLGYATLGHHGIPM-----------------LWQSEVLKFIFPW-LNLV-----EVEV----TGGGGVGS 153 (221)
Q Consensus 101 ~yi~aQ~~Ga~~g~~~~~~~~~~~-----------------~~~~~~~E~~~t~-Lv~~-----~~~~----~~~~~~~i 153 (221)
.|+++|++|+++|+.+. +.++++ ..++++.|+++|+ |+++ ++++ ....++.+
T Consensus 81 ~y~~aQ~~Ga~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~i 159 (216)
T TIGR00861 81 VYIVAQLIGAILGAALL-YGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAI 159 (216)
T ss_pred HHHHHHHHHHHHHHHHH-HHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHH
Confidence 99999999999999998 776532 5688999999999 8776 2211 12789999
Q ss_pred HHHHHHHHHHhcCCCccCcchhhhhhhccccC--cccceeecchhhhHHHHHHHHHH
Q psy10345 154 IATYYQLYQVNGPYTGASMNAARSIAPAFINN--IWTKQWIYWTAPTLAGTVTPLIY 208 (221)
Q Consensus 154 g~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~--~~~~~wvy~~~p~~Ga~la~~~~ 208 (221)
|+.+...+...+++||+++||||++++++.++ +|+++|+||++|++|+++++.+|
T Consensus 160 G~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 160 GLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999987 89999999999999999999875
No 16
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.53 E-value=3.5e-14 Score=118.41 Aligned_cols=98 Identities=22% Similarity=0.260 Sum_probs=84.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCc--c
Q psy10345 18 IHRALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDI--S 95 (221)
Q Consensus 18 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~--~ 95 (221)
..+.+|.++.|+++|+++++.++......+.. .+....++.+|+.+....+..++.||+|+|||++++..+.++. +
T Consensus 126 ~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~--~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~ 203 (228)
T cd00333 126 GVSNGNAFFVEFIGTFILVLVVFATTDDPNGP--PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARH 203 (228)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHccccccC--CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccc
Confidence 34678999999999999999998775432211 1233468999999999999999999999999999999999988 7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHh
Q psy10345 96 VADALVYVMAQLIGAVLGYATL 117 (221)
Q Consensus 96 ~~~~~~yi~aQ~~Ga~~g~~~~ 117 (221)
|.+.++|+++|++|+++|+.+.
T Consensus 204 ~~~~~vy~vap~lGai~aa~l~ 225 (228)
T cd00333 204 WHYFWVYWVGPLIGAIAGALVY 225 (228)
T ss_pred cceeehhhhHHHHHHHHHHHHH
Confidence 9999999999999999999876
No 17
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.52 E-value=4.8e-14 Score=120.64 Aligned_cols=97 Identities=20% Similarity=0.257 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhH
Q psy10345 20 RALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADA 99 (221)
Q Consensus 20 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~ 99 (221)
+.++.+++|+++|++|++++++...+.+. .+. ..++.+|+.+++.++..+++||+|+|||+|++..+.++ .|.+.
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~~~---~~~-~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~~ 231 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDSRA---VGE-LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKGI 231 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheecccc---CCc-chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccce
Confidence 46799999999999999998875443221 111 25889999999999999999999999999999999754 57899
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcc
Q psy10345 100 LVYVMAQLIGAVLGYATLGHHGI 122 (221)
Q Consensus 100 ~~yi~aQ~~Ga~~g~~~~~~~~~ 122 (221)
++|+++|++|+++|+++. +.+.
T Consensus 232 wvY~vap~lGA~lgally-~~l~ 253 (283)
T PLN00182 232 WVYIVGPFVGIIAGGFVY-NLIR 253 (283)
T ss_pred eHHHHHHHHHHHHHHHHH-HHHh
Confidence 999999999999999998 6554
No 18
>PLN00184 aquaporin NIP1; Provisional
Probab=99.49 E-value=4.9e-14 Score=121.31 Aligned_cols=90 Identities=17% Similarity=0.091 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHhH-hhhc-------cc-CC--CCcH--HHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-cccce
Q psy10345 125 LWQSEVLKFIFPW-LNLV-------EV-EV--TGGG--GVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-IWTKQ 190 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~-------~~-~~--~~~~--~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-~~~~~ 190 (221)
..+.++.|+++|+ |+++ +. +. .... ++..|+.+.+.++..+++||+++|||+++++++.++ .|...
T Consensus 53 ~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~~~ 132 (296)
T PLN00184 53 FLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQV 132 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHHHH
Confidence 4578999999999 8887 11 11 1333 444599999999999999999999999999999877 89999
Q ss_pred eecchhhhHHHHHHHHHHHHhhcC
Q psy10345 191 WIYWTAPTLAGTVTPLIYTYAFER 214 (221)
Q Consensus 191 wvy~~~p~~Ga~la~~~~~~~~~~ 214 (221)
|+||++|++|+++|+++++.++..
T Consensus 133 ~~YiiaQllGA~lga~~~~~l~~~ 156 (296)
T PLN00184 133 PAYVISQVIGSTLAAATLRLLFGL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999988754
No 19
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.47 E-value=1.8e-13 Score=113.32 Aligned_cols=96 Identities=19% Similarity=0.212 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhc-Ccchh
Q psy10345 19 HRALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLG-DISVA 97 (221)
Q Consensus 19 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g-~~~~~ 97 (221)
.+.++.++.|+++|+++++..+......+.. ......++.+|+.+...++..++.||+|+|||++++..+.+ ..+|.
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~--~~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~ 196 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDPRNRV--PRGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWG 196 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecCCCCC--CCCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhcccccc
Confidence 4678999999999999999988765542221 12224789999999999999999999999999999999976 57899
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy10345 98 DALVYVMAQLIGAVLGYAT 116 (221)
Q Consensus 98 ~~~~yi~aQ~~Ga~~g~~~ 116 (221)
+.++|+++|++|+++|+.+
T Consensus 197 ~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 197 NHWVYWVGPIIGAILGALV 215 (216)
T ss_pred ceeHHHHHHHHHHHHHHHh
Confidence 9999999999999999765
No 20
>PLN00026 aquaporin NIP; Provisional
Probab=99.44 E-value=3.9e-13 Score=115.63 Aligned_cols=96 Identities=19% Similarity=0.216 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhH
Q psy10345 20 RALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADA 99 (221)
Q Consensus 20 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~ 99 (221)
+.++.++.||++|++|+++++....+.+ . ... ..++.+|+.++..++..++.||+|+|||.|++..+.++ +|.+.
T Consensus 185 s~~~a~~~Efi~TfiLv~vi~~v~~~~~-~-~~~--~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~-~~~~~ 259 (298)
T PLN00026 185 STGQAFALEFIITFNLLFVVTAVATDTR-A-VGE--LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG-NYRAI 259 (298)
T ss_pred cHHHHHHHHHHHHHHHHHhheeeecCCC-C-cCC--ccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC-Cchhe
Confidence 5678999999999999999875432221 1 111 25689999999999999999999999999999999876 88999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhc
Q psy10345 100 LVYVMAQLIGAVLGYATLGHHG 121 (221)
Q Consensus 100 ~~yi~aQ~~Ga~~g~~~~~~~~ 121 (221)
++|+++|++||++|+.+. +.+
T Consensus 260 wVy~vaPilGAilga~ly-~~~ 280 (298)
T PLN00026 260 WIYLVAPTLGALAGAGTY-TAV 280 (298)
T ss_pred eHHHHHHHHHHHHHHHHH-HHH
Confidence 999999999999999887 544
No 21
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.44 E-value=4e-13 Score=114.54 Aligned_cols=96 Identities=22% Similarity=0.340 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhHH
Q psy10345 21 ALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADAL 100 (221)
Q Consensus 21 ~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~~ 100 (221)
.++.++.|+++|+++++.+++...+.. .... ..++.+|+.+++.++..+++||+|+|||+|++..+.+ .+|.+.+
T Consensus 160 ~~~~~~~E~v~T~iLv~~i~~~~~~~~---~~~~-~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~w 234 (274)
T PLN00183 160 CSSAFWVEFIATFIVMFLAASLTSQPQ---SLGH-LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDIW 234 (274)
T ss_pred HHHHHHHHHHHHHHHHHhhheeecccc---CCCC-ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhhee
Confidence 478999999999999999887654321 1111 2478899999999999999999999999999999987 5899999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcc
Q psy10345 101 VYVMAQLIGAVLGYATLGHHGI 122 (221)
Q Consensus 101 ~yi~aQ~~Ga~~g~~~~~~~~~ 122 (221)
+|+++|++|+++|+.+. +.+.
T Consensus 235 vy~vapilGailaa~l~-~~l~ 255 (274)
T PLN00183 235 IYITAPTIGAVAGALMF-HLLR 255 (274)
T ss_pred hHHHHHHHHHHHHHHHH-HHHh
Confidence 99999999999999998 6664
No 22
>PLN00166 aquaporin TIP2; Provisional
Probab=99.36 E-value=1.1e-12 Score=110.73 Aligned_cols=90 Identities=17% Similarity=0.263 Sum_probs=75.7
Q ss_pred hHHHHHHHHHHhH-hhhc------c--c-C------CCC--cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-
Q psy10345 125 LWQSEVLKFIFPW-LNLV------E--V-E------VTG--GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN- 185 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~------~--~-~------~~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~- 185 (221)
..+.++.|+++|+ |+++ + + + ... ..++.+|+.+.+.+++.+++||+++||||++++++.++
T Consensus 17 ~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g~~ 96 (250)
T PLN00166 17 SLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNI 96 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCC
Confidence 4578999999999 8887 2 1 1 011 24667899999999999999999999999999999755
Q ss_pred cccceeecchhhhHHHHHHHHHHHHhhcC
Q psy10345 186 IWTKQWIYWTAPTLAGTVTPLIYTYAFER 214 (221)
Q Consensus 186 ~~~~~wvy~~~p~~Ga~la~~~~~~~~~~ 214 (221)
+|...|+||++|++|+++++.+++.++.+
T Consensus 97 ~~~~~~~y~~aq~lGa~~~a~~~~~~~~~ 125 (250)
T PLN00166 97 TIITGFFYWIAQCLGSIVACLLLVFVTNG 125 (250)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 68899999999999999999999988653
No 23
>PRK05420 aquaporin Z; Provisional
Probab=99.30 E-value=4.9e-12 Score=105.66 Aligned_cols=88 Identities=14% Similarity=0.047 Sum_probs=73.9
Q ss_pred HHHHHHHHHHhH-hhhc-------cc--CCC--Cc--HHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-cccce
Q psy10345 126 WQSEVLKFIFPW-LNLV-------EV--EVT--GG--GGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-IWTKQ 190 (221)
Q Consensus 126 ~~~~~~E~~~t~-Lv~~-------~~--~~~--~~--~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-~~~~~ 190 (221)
.+.++.|+++|+ |++. .+ ++. +. .++..|+.+.+.+++.+++||+++|||+++++.+.+. +|...
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 478899999999 8886 11 111 22 3678899999999999999999999999999999876 79999
Q ss_pred eecchhhhHHHHHHHHHHHHhhc
Q psy10345 191 WIYWTAPTLAGTVTPLIYTYAFE 213 (221)
Q Consensus 191 wvy~~~p~~Ga~la~~~~~~~~~ 213 (221)
|.||++|++|+++++.+.+.++.
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~ 104 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIAS 104 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999977776654
No 24
>PLN00167 aquaporin TIP5; Provisional
Probab=99.30 E-value=5.6e-12 Score=106.73 Aligned_cols=90 Identities=13% Similarity=0.145 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHhH-hhhc------ccC----C-C--C----cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-
Q psy10345 125 LWQSEVLKFIFPW-LNLV------EVE----V-T--G----GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN- 185 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~------~~~----~-~--~----~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~- 185 (221)
..+.++.|+++|+ |++. +.+ + + . ..++.+|+.+.+.+++.+++||+++|||+++++.+.++
T Consensus 21 ~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g~~ 100 (256)
T PLN00167 21 ALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGHI 100 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhCCC
Confidence 5678999999999 8877 111 1 1 1 36788999999999999999999999999999999866
Q ss_pred cccceeecchhhhHHHHHHHHHHHHhhcC
Q psy10345 186 IWTKQWIYWTAPTLAGTVTPLIYTYAFER 214 (221)
Q Consensus 186 ~~~~~wvy~~~p~~Ga~la~~~~~~~~~~ 214 (221)
.|...|+||++|++|+++++.+++.++.+
T Consensus 101 ~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 101 SVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred cHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 68999999999999999999999887644
No 25
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.29 E-value=3.5e-12 Score=109.99 Aligned_cols=90 Identities=17% Similarity=0.099 Sum_probs=75.6
Q ss_pred hHHHHHHHHHHhH-hhhc------cc---C-CCC--cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-cccce
Q psy10345 125 LWQSEVLKFIFPW-LNLV------EV---E-VTG--GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-IWTKQ 190 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~------~~---~-~~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-~~~~~ 190 (221)
..+.++.|+++|+ |+++ +. + +.. ..++.+|+.+...+++.+++||+++|||+++++++.++ .|...
T Consensus 49 ~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~~ 128 (294)
T PTZ00016 49 NVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKKL 128 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHHH
Confidence 3468999999999 8876 11 1 112 34567889999999999999999999999999999987 79999
Q ss_pred eecchhhhHHHHHHHHHHHHhhcC
Q psy10345 191 WIYWTAPTLAGTVTPLIYTYAFER 214 (221)
Q Consensus 191 wvy~~~p~~Ga~la~~~~~~~~~~ 214 (221)
|.||++|++|+++|+.+.+.++.+
T Consensus 129 ~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 129 PGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999998877654
No 26
>PLN00027 aquaporin TIP; Provisional
Probab=99.27 E-value=7.3e-12 Score=105.93 Aligned_cols=89 Identities=16% Similarity=0.282 Sum_probs=74.9
Q ss_pred hHHHHHHHHHHhH-hhhc------c--c-C-C-----CC--cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-
Q psy10345 125 LWQSEVLKFIFPW-LNLV------E--V-E-V-----TG--GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN- 185 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~------~--~-~-~-----~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~- 185 (221)
..+.++.|+++|+ |+++ . . . + .. ..++.+|+.+...++..+++||+++||||++++.+.++
T Consensus 19 ~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~~ 98 (252)
T PLN00027 19 ALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGNI 98 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCCC
Confidence 4578999999999 8877 1 1 1 1 11 35788899999999999999999999999999998665
Q ss_pred cccceeecchhhhHHHHHHHHHHHHhhc
Q psy10345 186 IWTKQWIYWTAPTLAGTVTPLIYTYAFE 213 (221)
Q Consensus 186 ~~~~~wvy~~~p~~Ga~la~~~~~~~~~ 213 (221)
.|...|+||++|++|+++++.+++....
T Consensus 99 ~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 126 (252)
T PLN00027 99 TLLRGILYWIAQLLGSVVACLLLKFSTG 126 (252)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6888999999999999999999987754
No 27
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.19 E-value=3e-11 Score=100.60 Aligned_cols=94 Identities=20% Similarity=0.160 Sum_probs=78.6
Q ss_pred HHHHHHHHHHhH-hhhc----------cc-CCC----CcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-ccc
Q psy10345 126 WQSEVLKFIFPW-LNLV----------EV-EVT----GGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-IWT 188 (221)
Q Consensus 126 ~~~~~~E~~~t~-Lv~~----------~~-~~~----~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-~~~ 188 (221)
.+.++.|+++|+ |++. ++ +.. ....+..|+.+.+.++..+++||+++|||.+++.++..+ +|.
T Consensus 5 ~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp~~ 84 (241)
T COG0580 5 TKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFPWR 84 (241)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCCHH
Confidence 356799999999 8887 11 111 135677899999999999999999999999999999887 799
Q ss_pred ceeecchhhhHHHHHHHHHHHHhhcCccccc
Q psy10345 189 KQWIYWTAPTLAGTVTPLIYTYAFERKRLEK 219 (221)
Q Consensus 189 ~~wvy~~~p~~Ga~la~~~~~~~~~~~~~~~ 219 (221)
....|+++|++|+++++.+...++.++..+.
T Consensus 85 ~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~ 115 (241)
T COG0580 85 KVLPYIVAQVLGAFAGAALLYLLYYGKILET 115 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHhh
Confidence 9999999999999999988887777665544
No 28
>KOG0223|consensus
Probab=99.16 E-value=2.1e-11 Score=101.72 Aligned_cols=99 Identities=21% Similarity=0.187 Sum_probs=84.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcch
Q psy10345 17 FIHRALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISV 96 (221)
Q Consensus 17 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~ 96 (221)
...+.++..+.|++.||.+++..++...+.+ +. ...++.+|+.+...+...+++||+++|||.|++..+..+. |
T Consensus 127 ~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~---~~--~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~-w 200 (238)
T KOG0223|consen 127 PGLSTGQGLVIEIILTFILVFTVFATATDPR---RS--ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGS-W 200 (238)
T ss_pred CCCCcchhHHHHHHHHHHHhheeEEEeecCC---Cc--ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcC-C
Confidence 3445689999999999999998876444322 11 4578999999999999999999999999999999998875 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcc
Q psy10345 97 ADALVYVMAQLIGAVLGYATLGHHGI 122 (221)
Q Consensus 97 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 122 (221)
.+.++|++++++|+++++++. +.+.
T Consensus 201 ~~hwiYwvgP~~Ga~~a~~~y-~~v~ 225 (238)
T KOG0223|consen 201 DDHWIYWVGPLLGAILAALIY-RLVF 225 (238)
T ss_pred CcEEEEEhhHHHHHHHHHHHH-HHhc
Confidence 999999999999999999998 6554
No 29
>KOG0224|consensus
Probab=99.12 E-value=5.5e-11 Score=100.66 Aligned_cols=90 Identities=18% Similarity=0.145 Sum_probs=74.8
Q ss_pred hHHHHHHHHHHhH-hhhc----------c-cCCC--CcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-cccc
Q psy10345 125 LWQSEVLKFIFPW-LNLV----------E-VEVT--GGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-IWTK 189 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~----------~-~~~~--~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-~~~~ 189 (221)
..+.+++||++|+ |++. . .+.. ....+..|+.++..+++.+.+||+++|||.+++..+.++ .|.+
T Consensus 31 l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~k 110 (316)
T KOG0224|consen 31 LLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWKK 110 (316)
T ss_pred HHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChhh
Confidence 6789999999999 8877 1 1222 244667789999999999999999999999999999987 8999
Q ss_pred eeecchhhhHHHHHHHHHHHHhhcC
Q psy10345 190 QWIYWTAPTLAGTVTPLIYTYAFER 214 (221)
Q Consensus 190 ~wvy~~~p~~Ga~la~~~~~~~~~~ 214 (221)
+.+|.++|++|+.+++......|.+
T Consensus 111 ~p~Y~~aQ~iGAF~gaa~~y~~y~d 135 (316)
T KOG0224|consen 111 FPVYVLAQFIGAFLGAATVYGLYYD 135 (316)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998775555443
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=98.88 E-value=1.1e-08 Score=84.98 Aligned_cols=96 Identities=21% Similarity=0.241 Sum_probs=78.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchh
Q psy10345 18 IHRALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVA 97 (221)
Q Consensus 18 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~ 97 (221)
..+.++.+..|+++|+++++.......+.+.. ..+. ..++.+|+.+.......++.||+.+|||.+++..+.... +.
T Consensus 131 ~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~-~~~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~~ 207 (227)
T PF00230_consen 131 GISLGQAFFSEFIGTFILVLVILAVADDKRKF-PLGP-LAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-WD 207 (227)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSS-TSSG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-HT
T ss_pred cchhhhhhhhhhhhhhHHHhhhhhhccccccc-cccc-ccceeEEEEEeecccccccccccccCchhhcCceeeccc-CC
Confidence 34568999999999999999887765544433 2122 357888999999998999999999999999999888765 88
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy10345 98 DALVYVMAQLIGAVLGYAT 116 (221)
Q Consensus 98 ~~~~yi~aQ~~Ga~~g~~~ 116 (221)
..++|++++++|+++|+.+
T Consensus 208 ~~wvy~~~P~~Ga~~a~~~ 226 (227)
T PF00230_consen 208 YFWVYWVGPFIGAILAALL 226 (227)
T ss_dssp TTTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEehHHHHHHHHHhh
Confidence 9999999999999999875
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=95.14 E-value=1.8 Score=36.91 Aligned_cols=164 Identities=13% Similarity=0.146 Sum_probs=89.7
Q ss_pred CchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhHHHHHHHHHHHHHHHHHHhhhhcc-c------h-
Q psy10345 53 PSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADALVYVMAQLIGAVLGYATLGHHGI-P------M- 124 (221)
Q Consensus 53 ~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~-~------~- 124 (221)
..+..++.+++++...++..+..--+ |--....-...+++++++.+--+.-=.+|=++|+.++++.+. + +
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~ 140 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANG 140 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 44566777777777777765443211 444445556778999999888888777888888877734331 0 0
Q ss_pred -----------------hHHHHHHHHHHhHhh-hc-----ccCCCCcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhc
Q psy10345 125 -----------------LWQSEVLKFIFPWLN-LV-----EVEVTGGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPA 181 (221)
Q Consensus 125 -----------------~~~~~~~E~~~t~Lv-~~-----~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~ 181 (221)
..+.|+--+++-+++ +. ..++..-.-+.+-+-+..-+.. ++.=...|-..---.+
T Consensus 141 ~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~~k~~~~K~~~m~~pv~~Fv~~--GfeH~VANm~~i~~~~ 218 (265)
T COG2116 141 QWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYSAKDGAAKIFAIILPVMLFVAS--GFEHSVANMFMIPWAA 218 (265)
T ss_pred hhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHc--CCceeeehHHHHHHHH
Confidence 223333333333322 22 3344444555555555444433 3333444533221122
Q ss_pred cccC--cccc-----eeecchhhhHHH-HHHHHHHHHhhcCcccccC
Q psy10345 182 FINN--IWTK-----QWIYWTAPTLAG-TVTPLIYTYAFERKRLEKQ 220 (221)
Q Consensus 182 l~~~--~~~~-----~wvy~~~p~~Ga-~la~~~~~~~~~~~~~~~~ 220 (221)
...+ +|.+ .-.-.+|.++|+ ++.++.|++++++++++|+
T Consensus 219 ~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~~~~~~ 265 (265)
T COG2116 219 VFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQNRYKR 265 (265)
T ss_pred HcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhcccccccCC
Confidence 2222 3443 223445666654 5578889999988877664
No 32
>PRK11562 nitrite transporter NirC; Provisional
Probab=94.25 E-value=0.78 Score=39.26 Aligned_cols=60 Identities=15% Similarity=0.233 Sum_probs=37.3
Q ss_pred hhhhHHHHHHHHHHHHhhccc-CCcccChHHHHHHHHhcCcchhhHHHHHHHHHHHHHHHHHHh
Q psy10345 55 LQPALMFGFVVSTIITIFGHI-SSAHLNPSVTVAAFMLGDISVADALVYVMAQLIGAVLGYATL 117 (221)
Q Consensus 55 ~~~~l~~g~~~~~~i~~~~~i-SGah~NPaVTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~ 117 (221)
+..+..+++++...+..-+.. +| |=.......+.||.++++.+-.+.-=.+|=++|+.+.
T Consensus 59 li~g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~ 119 (268)
T PRK11562 59 LVMGATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFV 119 (268)
T ss_pred HHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 344666777777776654442 23 4444445677888998887766666566666665555
No 33
>PRK10805 formate transporter; Provisional
Probab=90.25 E-value=8.8 Score=33.15 Aligned_cols=60 Identities=17% Similarity=0.157 Sum_probs=36.0
Q ss_pred hhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhHHHHH----HHHHHHHHHHHHHh
Q psy10345 55 LQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADALVYV----MAQLIGAVLGYATL 117 (221)
Q Consensus 55 ~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~~~yi----~aQ~~Ga~~g~~~~ 117 (221)
+..++.+.+++...+..-+..--+ |-..++ ..+.||.++.+.+-.+ ++-++|+++-+.+.
T Consensus 69 ll~~~~F~vGlilIvl~g~eLFTg--n~l~~~-~~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~ 132 (285)
T PRK10805 69 LVGGICFSLGLILCVVCGADLFTS--TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLM 132 (285)
T ss_pred HHHHHHHHHHHHHHHHhCcccchh--hHHHHH-HHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444666777777777665543222 666554 4678899998887444 44455555444444
No 34
>PRK09713 focB putative formate transporter; Provisional
Probab=82.68 E-value=31 Score=29.80 Aligned_cols=60 Identities=17% Similarity=0.033 Sum_probs=35.0
Q ss_pred hhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhHHHH----HHHHHHHHHHHHHHh
Q psy10345 55 LQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADALVY----VMAQLIGAVLGYATL 117 (221)
Q Consensus 55 ~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~~~y----i~aQ~~Ga~~g~~~~ 117 (221)
+..++.+.+++...+..-+..--+ |=... .....|+.++++.+-. .++-++|+++-+.+.
T Consensus 68 ll~g~~F~vGLilIv~~g~ELfTg--N~~~~-~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~ 131 (282)
T PRK09713 68 LVGGLCFTLGFILLAVCGTSLFTS--SVMTV-MAKSRGVISWRTWLINALLVACGNLAGIACFSLLI 131 (282)
T ss_pred HHHHHHHHHHHHHHHHhCccccHH--HHHHH-HHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666777777777765543322 32222 3356889998888844 445555555555544
No 35
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=77.86 E-value=40 Score=28.19 Aligned_cols=59 Identities=17% Similarity=0.236 Sum_probs=35.0
Q ss_pred hhhHHHHHHHHHHHHhhcc-cCCcccChHHHHHHHHhcCcchhhHHHHHHHHHHHHHHHHHHh
Q psy10345 56 QPALMFGFVVSTIITIFGH-ISSAHLNPSVTVAAFMLGDISVADALVYVMAQLIGAVLGYATL 117 (221)
Q Consensus 56 ~~~l~~g~~~~~~i~~~~~-iSGah~NPaVTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~ 117 (221)
..++.+..++...+..-+. .+| |-.......+.||.++.+.+-.+.-=.+|=++|+.+.
T Consensus 45 l~~~~F~~gl~~Iv~~g~eLfTg---n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~ 104 (239)
T TIGR00790 45 VGGATFPIGLILVVIAGSDLFTG---NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFV 104 (239)
T ss_pred HHHHHHHHHHheeeeeCcccccc---chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555544333 222 5444445577899998888777666666666666555
No 36
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=72.58 E-value=33 Score=28.96 Aligned_cols=63 Identities=21% Similarity=0.169 Sum_probs=41.2
Q ss_pred CchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhHHHHHHHHHHHHHHHHHHh
Q psy10345 53 PSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADALVYVMAQLIGAVLGYATL 117 (221)
Q Consensus 53 ~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~ 117 (221)
..+..++.+++++...+..-+..- --|-......++.||.++++.+--+.-=.+|=++|+.+.
T Consensus 56 ~~l~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~ 118 (250)
T PF01226_consen 56 AKLVGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLF 118 (250)
T ss_dssp HHHHHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 334567777777777777655432 126676667788899999888777666666666666665
No 37
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=71.09 E-value=70 Score=30.42 Aligned_cols=119 Identities=15% Similarity=0.125 Sum_probs=69.5
Q ss_pred cChHHHHHHHHhcCcchhhHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHHHHhH--hhhc---ccCCCCcHHHHHH
Q psy10345 80 LNPSVTVAAFMLGDISVADALVYVMAQLIGAVLGYATLGHHGIPMLWQSEVLKFIFPW--LNLV---EVEVTGGGGVGSI 154 (221)
Q Consensus 80 ~NPaVTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~E~~~t~--Lv~~---~~~~~~~~~~~ig 154 (221)
...+|+.+++.....+.+....++.+.++|+.+|.... ..+.|..-. +.++...+ .++. -...+......++
T Consensus 370 ~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~-~~vlP~~~~--f~~L~l~l~~~l~~~~~~~~~p~~~~~g~~ 446 (650)
T PF04632_consen 370 MMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYL-FFVLPHLDG--FPLLALVLAPFLFLGGLLMARPRTAYIGLG 446 (650)
T ss_pred HHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHH-HHhhhccCc--HHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 34445555555566788899999999999999999999 989987222 12222222 1111 2223334444444
Q ss_pred HHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcCc
Q psy10345 155 ATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFERK 215 (221)
Q Consensus 155 ~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~ 215 (221)
+.+.......-. .....|++.-+- -.++-++|.+++.+.++.+.+.+
T Consensus 447 ~~v~f~~~~~~~-n~~~~d~~~f~n-------------~~la~l~G~~~a~l~~~li~p~~ 493 (650)
T PF04632_consen 447 FAVFFLLLLGPG-NPYSYDFATFLN-------------RALAILLGIVIAALVFRLIRPFS 493 (650)
T ss_pred HHHHHHHHhcCC-CCCCCCHHHHHH-------------HHHHHHHHHHHHHHHHHHHCCCC
Confidence 444443333221 234455544332 34677889999998988886544
No 38
>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional
Probab=61.40 E-value=93 Score=30.22 Aligned_cols=119 Identities=14% Similarity=-0.028 Sum_probs=74.2
Q ss_pred CcccChHHHHHHHHhcCcchhhHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHHHHhH-hhhc---ccCCCCcHHHH
Q psy10345 77 SAHLNPSVTVAAFMLGDISVADALVYVMAQLIGAVLGYATLGHHGIPMLWQSEVLKFIFPW-LNLV---EVEVTGGGGVG 152 (221)
Q Consensus 77 Gah~NPaVTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~E~~~t~-Lv~~---~~~~~~~~~~~ 152 (221)
++-...+|..+++.+-..|.+-..-+...+++|..+|.... ..+.|...+.+..-++.-. +.+. ..... ....
T Consensus 380 ~a~~~aAV~~~LfA~~~nP~~~~~~fl~Gtl~a~~~a~l~~-f~vLP~i~~~f~lL~laLap~~~~~g~~~~~~--~~~~ 456 (652)
T PRK10631 380 GAMVMIAVVTSLAMRLPNPRMVAIDFLYGTLAALPLGALYF-MVIIPNTQQSMLLLCISLGVLGFFIGIEVQKR--RLGS 456 (652)
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHH-HHHHhcccccHHHHHHHHHHHHHHHHHHhccc--HHHH
Confidence 47888899999888888888888899999999999999999 9999974333433333333 2222 11111 1223
Q ss_pred HHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhh
Q psy10345 153 SIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAF 212 (221)
Q Consensus 153 ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~ 212 (221)
+|..+..+.+..-. .-...||+.-+- =-++.++|..++.+.++.+.
T Consensus 457 lg~~i~f~~~l~l~-n~~~~d~~~FlN-------------~alA~v~Gi~~A~l~f~lir 502 (652)
T PRK10631 457 LGALASTINILVLD-NPMTFHFSQFLD-------------SALGQIVGCFLALIVILLVR 502 (652)
T ss_pred HHHHHHHHHHhccC-CCCCcCHHHHHH-------------HHHHHHHHHHHHHHHHHHhC
Confidence 45555444333221 123344443332 23578889999988886553
No 39
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=55.10 E-value=4 Score=30.32 Aligned_cols=20 Identities=15% Similarity=0.170 Sum_probs=17.3
Q ss_pred ccCCcccChHHHHHHHHhcC
Q psy10345 74 HISSAHLNPSVTVAAFMLGD 93 (221)
Q Consensus 74 ~iSGah~NPaVTla~~l~g~ 93 (221)
.-|+||+||.+.++..+..+
T Consensus 6 ~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 6 GGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp ESSHHHHHHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHhcc
Confidence 34789999999999999865
No 40
>COG1289 Predicted membrane protein [Function unknown]
Probab=53.70 E-value=1.8e+02 Score=28.10 Aligned_cols=103 Identities=17% Similarity=0.082 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcC---cchhhHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHHH
Q psy10345 58 ALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGD---ISVADALVYVMAQLIGAVLGYATLGHHGIPMLWQSEVLKFI 134 (221)
Q Consensus 58 ~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~---~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~E~~ 134 (221)
+++..++..+......+....++ +|....+... .+.++..-++.+=++|..+|..+. +...|...+ .+.=++
T Consensus 362 ala~~~~~~~~~~~~w~~g~w~l---lt~~vV~~~~~~~~t~~r~~~ri~GTllg~~~g~~~l-~~~~p~~~~-~l~~l~ 436 (674)
T COG1289 362 ALALLLGYAFWLALGWPHGYWIL---LTAAVVCQPNAYGATRQRARQRILGTLLGLLLGLLVL-LLLLPLIPG-LLLLLL 436 (674)
T ss_pred HHHHHHHHHHHHHhcCCccHHHH---HHHHHHcCcccCCCHHHHHHHHHHHHHHHHHHHHHHH-HHhcccchh-HHHHHH
Confidence 34444444444444444322333 3444444333 367888889999999999999998 777776443 222222
Q ss_pred HhH-hh-hc-ccCCCCcHHHHHHHHHHHHHHHhc
Q psy10345 135 FPW-LN-LV-EVEVTGGGGVGSIATYYQLYQVNG 165 (221)
Q Consensus 135 ~t~-Lv-~~-~~~~~~~~~~~ig~~v~~~~~~~~ 165 (221)
+.. ++ +. .........+.+++.+..+....+
T Consensus 437 ~~~~l~~~~~~~~~~~~a~~~i~l~v~~~~~l~~ 470 (674)
T COG1289 437 LAALLFAAGIRLAKYRLATLGITLLVLFLVGLLG 470 (674)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHcc
Confidence 332 33 22 333445666666666666555443
No 41
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=50.64 E-value=87 Score=24.43 Aligned_cols=64 Identities=19% Similarity=0.247 Sum_probs=41.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcc
Q psy10345 16 TFIHRALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDIS 95 (221)
Q Consensus 16 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~ 95 (221)
++.++.+-..+.|.+||.+.--. .++.+..+..++-.+ .
T Consensus 84 r~~~k~~~a~lGEviGTGiIGal------------------------~sypva~~~~g~~~~-----------------~ 122 (150)
T PF09512_consen 84 RKTKKLWAAALGEVIGTGIIGAL------------------------LSYPVAKLFMGKEAA-----------------L 122 (150)
T ss_pred HHhCcchHHHHHHHHhhHHHHHH------------------------HHHHHHHHHhCCchh-----------------h
Confidence 45567788999999999886221 233333333332211 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhc
Q psy10345 96 VADALVYVMAQLIGAVLGYATLGHHG 121 (221)
Q Consensus 96 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~ 121 (221)
+.-.+.+..+-+.|+.+|..+. +.+
T Consensus 123 ~~~v~~F~~St~~Ga~ig~~~l-~~L 147 (150)
T PF09512_consen 123 FFFVPPFLISTLIGAIIGYILL-KAL 147 (150)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH-HHH
Confidence 5567778888888888888877 544
No 42
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=44.41 E-value=6.3 Score=34.82 Aligned_cols=22 Identities=18% Similarity=0.457 Sum_probs=18.5
Q ss_pred hhcccCCcccChHHHHHHHHhc
Q psy10345 71 IFGHISSAHLNPSVTVAAFMLG 92 (221)
Q Consensus 71 ~~~~iSGah~NPaVTla~~l~g 92 (221)
+.+.-+|||+.||+.++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 3556689999999999988874
No 43
>KOG1330|consensus
Probab=38.90 E-value=2e+02 Score=26.90 Aligned_cols=29 Identities=21% Similarity=0.390 Sum_probs=25.4
Q ss_pred cceeecchhhhHHHHHHHHHHHHhhcCcc
Q psy10345 188 TKQWIYWTAPTLAGTVTPLIYTYAFERKR 216 (221)
Q Consensus 188 ~~~wvy~~~p~~Ga~la~~~~~~~~~~~~ 216 (221)
.|.|-|++.+.+|.+++.+...+...|++
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 38899999999999999999888877765
No 44
>COG0730 Predicted permeases [General function prediction only]
Probab=34.84 E-value=2.6e+02 Score=23.11 Aligned_cols=50 Identities=22% Similarity=0.169 Sum_probs=35.2
Q ss_pred HHHHhcCcchhhHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHHHHhH
Q psy10345 87 AAFMLGDISVADALVYVMAQLIGAVLGYATLGHHGIPMLWQSEVLKFIFPW 137 (221)
Q Consensus 87 a~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~E~~~t~ 137 (221)
..+-.++.+|+....+...=.+|+.+|+.+. ....++..+..+.-++.-.
T Consensus 64 ~~~k~~~v~~~~~~~l~~~~~~G~~lG~~l~-~~~~~~~l~~~~~~~ll~~ 113 (258)
T COG0730 64 AYLKRGNVDWKLALILLLGALIGAFLGALLA-LLLPAELLKLLFGLLLLLL 113 (258)
T ss_pred HHHHcCCccHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Confidence 4445577899999999999999999998887 5555554444333333333
No 45
>PRK15071 lipopolysaccharide ABC transporter permease; Provisional
Probab=23.98 E-value=2.5e+02 Score=24.54 Aligned_cols=59 Identities=20% Similarity=0.281 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCC-CCchhhhHHHHHHHHHHHHhhcccC-CcccChHHH
Q psy10345 27 AEILGTFGLMFFGCMSCIGGFSQGS-VPSLQPALMFGFVVSTIITIFGHIS-SAHLNPSVT 85 (221)
Q Consensus 27 ~EfigT~~lv~~~~~~~~~~~~~~~-~~~~~~~l~~g~~~~~~i~~~~~iS-Gah~NPaVT 85 (221)
+-=+.++.+++++............ ...+..++.+|+.+......+...+ .++++|.+.
T Consensus 276 a~Pl~~~~~~lla~~~~~~~~R~~~~~~~i~~~i~~~~~y~~~~~~~~~lg~~g~l~P~la 336 (356)
T PRK15071 276 FQPLSVAVMMLMALSFIFGPLRSVTMGARVVTGISFGFVFYVSNEIFGPLSLVYGIPPIIG 336 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH
Confidence 3345556666665544333211111 2223445556666655555555443 477777654
No 46
>PF14241 DUF4341: Domain of unknown function (DUF4341)
Probab=20.45 E-value=98 Score=20.13 Aligned_cols=54 Identities=19% Similarity=0.117 Sum_probs=33.5
Q ss_pred cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHH
Q psy10345 148 GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTV 203 (221)
Q Consensus 148 ~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~l 203 (221)
...+.||+......+..+.+.|.+=+=.+.+.+ ...++.|-+.+.++=++|+.+
T Consensus 7 ~GG~lIGla~~~ll~~~Gri~GiSGil~~~~~~--~~~~~~W~~~fl~Gl~~g~~l 60 (62)
T PF14241_consen 7 IGGLLIGLAASLLLLLNGRIAGISGILSGLLSP--NKPDRDWRLAFLAGLILGGFL 60 (62)
T ss_pred HHHHHHHHHHHHHHHHcCcceehHHHHHHHhCC--CCCCccHHHHHHHHHHHHHHH
Confidence 456778888888888888888876444444444 112334455666666666554
Done!