Query psy10345
Match_columns 221
No_of_seqs 156 out of 1407
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 15:36:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10345.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10345hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyz_A Aquaporin-4; water tran 100.0 7E-51 2.4E-55 351.4 20.7 199 18-217 48-274 (340)
2 3gd8_A Aquaporin-4; proton exc 100.0 7.5E-51 2.6E-55 336.2 17.8 194 20-214 2-223 (223)
3 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 3.3E-50 1.1E-54 339.9 18.6 201 14-216 4-230 (266)
4 2zz9_A Aquaporin-4; water tran 100.0 3.7E-50 1.3E-54 344.0 18.2 199 17-216 8-234 (301)
5 2w2e_A AQY1, aquaporin, aquapo 100.0 6.9E-50 2.4E-54 339.9 18.9 201 15-216 38-268 (279)
6 1j4n_A Aquaporin 1; membrane p 100.0 1.1E-49 3.9E-54 337.8 16.9 199 17-216 6-237 (271)
7 3cn5_A Aquaporin; membrane pro 100.0 8.6E-50 3E-54 342.3 16.1 199 17-216 56-291 (304)
8 2b6o_A Aquaporin-0, lens fiber 100.0 6.8E-49 2.3E-53 331.7 20.7 197 17-215 5-226 (263)
9 3llq_A Aquaporin Z 2; aquapori 100.0 1.6E-49 5.6E-54 333.2 15.7 195 17-212 25-253 (256)
10 2o9g_A Aquaporin Z; integral m 100.0 3.2E-49 1.1E-53 328.8 16.0 194 21-215 4-233 (234)
11 3c02_A Aquaglyceroporin; membr 100.0 9.8E-49 3.3E-53 330.2 12.7 199 19-218 7-248 (258)
12 1ldf_A Glycerol uptake facilit 100.0 5.7E-48 1.9E-52 329.2 14.5 198 19-217 5-260 (281)
13 2f2b_A Aquaporin AQPM; protein 100.0 4.4E-47 1.5E-51 318.3 17.2 193 20-213 3-245 (246)
14 2f2b_A Aquaporin AQPM; protein 99.5 4.1E-14 1.4E-18 118.1 9.9 100 19-123 141-245 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.4 7.2E-13 2.5E-17 111.5 6.8 91 125-215 9-111 (263)
16 2zz9_A Aquaporin-4; water tran 99.2 3E-11 1E-15 103.2 7.1 91 125-215 12-118 (301)
17 3c02_A Aquaglyceroporin; membr 99.2 2E-11 6.7E-16 102.5 5.8 91 125-215 9-113 (258)
18 3gd8_A Aquaporin-4; proton exc 99.1 1.7E-11 5.8E-16 100.7 3.7 90 126-215 4-109 (223)
19 1j4n_A Aquaporin 1; membrane p 99.1 5.1E-11 1.7E-15 100.6 5.9 90 125-214 10-120 (271)
20 1ldf_A Glycerol uptake facilit 99.1 2.2E-11 7.7E-16 103.3 3.7 91 125-215 7-111 (281)
21 3iyz_A Aquaporin-4; water tran 99.1 3.3E-11 1.1E-15 104.0 4.5 91 125-215 51-157 (340)
22 2o9g_A Aquaporin Z; integral m 99.1 5E-10 1.7E-14 92.6 9.8 98 19-122 132-230 (234)
23 3llq_A Aquaporin Z 2; aquapori 99.1 3.5E-10 1.2E-14 94.6 8.7 98 20-123 156-254 (256)
24 3cn5_A Aquaporin; membrane pro 99.1 2.8E-10 9.5E-15 97.4 7.5 102 20-123 183-288 (304)
25 3d9s_A Aquaporin-5, AQP-5; aqu 99.1 6.9E-10 2.3E-14 93.4 9.8 98 20-122 128-226 (266)
26 2w2e_A AQY1, aquaporin, aquapo 99.0 1.3E-09 4.5E-14 92.2 9.4 97 20-121 167-263 (279)
27 3kcu_A Probable formate transp 90.0 5.4 0.00019 33.2 12.1 61 54-117 68-128 (285)
28 3tds_E Formate/nitrite transpo 87.9 4.6 0.00016 33.4 10.1 63 53-117 63-125 (268)
29 4fc4_A Nitrite transporter NIR 81.7 14 0.00048 30.3 10.3 62 54-117 58-119 (261)
30 3kly_A Putative formate transp 67.6 51 0.0017 27.2 13.5 61 54-117 67-127 (280)
31 3s2u_A UDP-N-acetylglucosamine 56.6 1.4 4.9E-05 37.5 -1.3 22 72-93 8-29 (365)
No 1
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=7e-51 Score=351.39 Aligned_cols=199 Identities=30% Similarity=0.461 Sum_probs=178.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccC---CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCc
Q psy10345 18 IHRALEICLAEILGTFGLMFFGCMSCIGGFSQ---GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDI 94 (221)
Q Consensus 18 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~---~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~ 94 (221)
.+++||++++||+||++|+|++++++.+.... ...+++.+++++|+++++.+++++++||||+|||||+++++.|++
T Consensus 48 ~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~ 127 (340)
T 3iyz_A 48 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKI 127 (340)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCC
Confidence 35789999999999999999999998854221 134678899999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhccch----------------hHHHHHHHHHHhH-hhhc-----ccC---CCCcH
Q psy10345 95 SVADALVYVMAQLIGAVLGYATLGHHGIPM----------------LWQSEVLKFIFPW-LNLV-----EVE---VTGGG 149 (221)
Q Consensus 95 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----------------~~~~~~~E~~~t~-Lv~~-----~~~---~~~~~ 149 (221)
+|.+++.|+++|++||++|+.++ +.++|+ ..++++.|+++|+ |+++ +++ .....
T Consensus 128 ~~~~~~~YiiAQ~lGA~~GA~lv-~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~~~ 206 (340)
T 3iyz_A 128 SIAKSVFYITAQCLGAIIGAGIL-YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSV 206 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCcccch
Confidence 99999999999999999999999 888753 5689999999999 8887 222 23578
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcCccc
Q psy10345 150 GVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFERKRL 217 (221)
Q Consensus 150 ~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~ 217 (221)
|+.||+.+...+..++++||++|||||||||+++.++|+++|+||++|++|+++|+++|++++.++.+
T Consensus 207 pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~~ 274 (340)
T 3iyz_A 207 ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVE 274 (340)
T ss_pred hhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCChh
Confidence 99999999888888889999999999999999999999999999999999999999999999876553
No 2
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-51 Score=336.24 Aligned_cols=194 Identities=30% Similarity=0.463 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccc---CCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcch
Q psy10345 20 RALEICLAEILGTFGLMFFGCMSCIGGFS---QGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISV 96 (221)
Q Consensus 20 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~---~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~ 96 (221)
++||++++||+||++|++++++++.+... ....+++.+++++|+++++.+++++++||||+|||||+++++.|+++|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 57899999999999999999998885421 113467889999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccch----------------hHHHHHHHHHHhH-hhhc-----ccCC---CCcHHH
Q psy10345 97 ADALVYVMAQLIGAVLGYATLGHHGIPM----------------LWQSEVLKFIFPW-LNLV-----EVEV---TGGGGV 151 (221)
Q Consensus 97 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----------------~~~~~~~E~~~t~-Lv~~-----~~~~---~~~~~~ 151 (221)
++++.|+++|++||++|+.++ +.++|+ ..++++.|+++|+ |+++ ++++ .+..|+
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv-~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl 160 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGIL-YLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIAL 160 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccCCccH
Confidence 999999999999999999999 888764 5689999999999 8887 3222 357899
Q ss_pred HHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcC
Q psy10345 152 GSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFER 214 (221)
Q Consensus 152 ~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~ 214 (221)
.||+.+...+...+++||++|||||||||+++.++|+++|+||++|++|+++++++|++++.|
T Consensus 161 ~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 161 AIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 999999888888888999999999999999999999999999999999999999999998754
No 3
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-50 Score=339.94 Aligned_cols=201 Identities=30% Similarity=0.468 Sum_probs=180.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcC
Q psy10345 14 RCTFIHRALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGD 93 (221)
Q Consensus 14 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~ 93 (221)
+....++++|++++||+||++|+|+++++..+.... ..+++.+++++|+++++.+++++++||||+|||||+++++.|+
T Consensus 4 ~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~-~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~ 82 (266)
T 3d9s_A 4 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSA-LPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQ 82 (266)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSS-CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSS
T ss_pred hhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcC
Confidence 344556789999999999999999999988643322 3567889999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccch----------------hHHHHHHHHHHhH-hhhc-----ccC---CCCc
Q psy10345 94 ISVADALVYVMAQLIGAVLGYATLGHHGIPM----------------LWQSEVLKFIFPW-LNLV-----EVE---VTGG 148 (221)
Q Consensus 94 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----------------~~~~~~~E~~~t~-Lv~~-----~~~---~~~~ 148 (221)
++|++++.|+++|++||++|+.++ +.++|+ ..++++.|+++|+ |+++ +++ ....
T Consensus 83 ~~~~~~~~Yi~AQ~lGA~~ga~l~-~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~ 161 (266)
T 3d9s_A 83 ISLLRAFFYVAAQLVGAIAGAGIL-YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGS 161 (266)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHH-HHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH-HHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccch
Confidence 999999999999999999999999 988753 5789999999999 8887 322 2468
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccc-eeecchhhhHHHHHHHHHHHHhhcCcc
Q psy10345 149 GGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTK-QWIYWTAPTLAGTVTPLIYTYAFERKR 216 (221)
Q Consensus 149 ~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~-~wvy~~~p~~Ga~la~~~~~~~~~~~~ 216 (221)
.|+.||+.+...++.++++||+++||||||||++++++|++ +|+||++|++|+++++++|++++.++.
T Consensus 162 ~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 230 (266)
T 3d9s_A 162 PALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNS 230 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999998 999999999999999999999976544
No 4
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=3.7e-50 Score=343.96 Aligned_cols=199 Identities=30% Similarity=0.472 Sum_probs=176.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccC---CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcC
Q psy10345 17 FIHRALEICLAEILGTFGLMFFGCMSCIGGFSQ---GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGD 93 (221)
Q Consensus 17 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~---~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~ 93 (221)
..++++|++++||+||++|+++++++..+.... ...+++.+++++|+++++.+++++++||||+|||||+++++.|+
T Consensus 8 ~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~ 87 (301)
T 2zz9_A 8 WTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK 87 (301)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcC
Confidence 456789999999999999999999988754321 13466789999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccch----------------hHHHHHHHHHHhH-hhhc-----ccC---CCCc
Q psy10345 94 ISVADALVYVMAQLIGAVLGYATLGHHGIPM----------------LWQSEVLKFIFPW-LNLV-----EVE---VTGG 148 (221)
Q Consensus 94 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----------------~~~~~~~E~~~t~-Lv~~-----~~~---~~~~ 148 (221)
++|++++.|+++|++||++|+.++ +.++++ ..++++.|+++|+ |+++ +++ ....
T Consensus 88 ~~~~~~~~YiiAQ~lGAi~Ga~lv-~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~~~~ 166 (301)
T 2zz9_A 88 ISIAKSVFYITAQCLGAIIGAGIL-YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGS 166 (301)
T ss_dssp SCTTTTHHHHHHHHHHHHHHHHHH-HTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH-HHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCccch
Confidence 999999999999999999999999 988753 5789999999999 8887 222 2458
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcCcc
Q psy10345 149 GGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFERKR 216 (221)
Q Consensus 149 ~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~ 216 (221)
.|+.||+.+...+..++++||++|||||||||+++.++|.++|+||++|++|+++++++|++++.++.
T Consensus 167 ~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~~ 234 (301)
T 2zz9_A 167 VALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 234 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred HhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCch
Confidence 89999999988888888999999999999999999999999999999999999999999999986543
No 5
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=6.9e-50 Score=339.89 Aligned_cols=201 Identities=20% Similarity=0.200 Sum_probs=175.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--------CCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHH
Q psy10345 15 CTFIHRALEICLAEILGTFGLMFFGCMSCIGGFS--------QGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTV 86 (221)
Q Consensus 15 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~--------~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTl 86 (221)
.+..++.+|++++||+||++|+|++++++..... ....+++.+++++|+++++.+++++++||||+|||||+
T Consensus 38 ~~~~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 117 (279)
T 2w2e_A 38 SDSVRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTL 117 (279)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHH
Confidence 3446688999999999999999999986432111 01134567999999999999999999999999999999
Q ss_pred HHHHhcCcchhhHHHHHHHHHHHHHHHHHHhhhhccch-------------hHHHHHHHHHHhH-hhhc-----c-c-CC
Q psy10345 87 AAFMLGDISVADALVYVMAQLIGAVLGYATLGHHGIPM-------------LWQSEVLKFIFPW-LNLV-----E-V-EV 145 (221)
Q Consensus 87 a~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-------------~~~~~~~E~~~t~-Lv~~-----~-~-~~ 145 (221)
++++.|+++|++++.|+++|++||++|+.++ +.++|+ ..++++.|+++|+ |+++ + + +.
T Consensus 118 a~~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv-~~~~~~~~~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~ 196 (279)
T 2w2e_A 118 ALVLARAIPPFRGILMAFTQIVAGMAAAGAA-SAMTPGEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRA 196 (279)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH-HHHSCSSCCCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTT
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 9999999999999999999999999999999 988754 5689999999999 8887 2 2 23
Q ss_pred CCcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcc-cceeecchhhhHHHHHHHHHHHHhhcCcc
Q psy10345 146 TGGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIW-TKQWIYWTAPTLAGTVTPLIYTYAFERKR 216 (221)
Q Consensus 146 ~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~-~~~wvy~~~p~~Ga~la~~~~~~~~~~~~ 216 (221)
..+.|+.||+.+.+.++..+++||++|||||||||+++++.| +++|+||++|++|+++++++|+++...++
T Consensus 197 ~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~ 268 (279)
T 2w2e_A 197 TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNY 268 (279)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 458999999999999999999999999999999999999765 68999999999999999999999876554
No 6
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.1e-49 Score=337.82 Aligned_cols=199 Identities=27% Similarity=0.412 Sum_probs=175.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc------C--CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHH
Q psy10345 17 FIHRALEICLAEILGTFGLMFFGCMSCIGGFS------Q--GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAA 88 (221)
Q Consensus 17 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~------~--~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~ 88 (221)
..++++|++++||+||++|+|+++++...... . ...+++.+++++|+++++.+++++++||||+|||||+++
T Consensus 6 ~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~ 85 (271)
T 1j4n_A 6 KKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGL 85 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHH
Confidence 34567899999999999999999998875321 1 112567899999999999999999999999999999999
Q ss_pred HHhcCcchhhHHHHHHHHHHHHHHHHHHhhhhccch----------------hHHHHHHHHHHhH-hhhc-----ccC--
Q psy10345 89 FMLGDISVADALVYVMAQLIGAVLGYATLGHHGIPM----------------LWQSEVLKFIFPW-LNLV-----EVE-- 144 (221)
Q Consensus 89 ~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----------------~~~~~~~E~~~t~-Lv~~-----~~~-- 144 (221)
++.|+++|++++.|+++|++||++|+.++ +.++++ ..++++.|+++|+ |+++ +++
T Consensus 86 ~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~ 164 (271)
T 1j4n_A 86 LLSCQISVLRAIMYIIAQCVGAIVATAIL-SGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRR 164 (271)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHHHHHHHH-HHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSCC
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhccccCC
Confidence 99999999999999999999999999999 887642 4678999999999 8887 322
Q ss_pred -CCCcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcCcc
Q psy10345 145 -VTGGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFERKR 216 (221)
Q Consensus 145 -~~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~ 216 (221)
.....|+.||+.+...+..++++||+++||||||||++++++|+++|+||++|++|+++++++|++++.++.
T Consensus 165 ~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 165 DLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 246899999999998888888899999999999999999999999999999999999999999999876543
No 7
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=8.6e-50 Score=342.33 Aligned_cols=199 Identities=25% Similarity=0.387 Sum_probs=177.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc----CCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhc
Q psy10345 17 FIHRALEICLAEILGTFGLMFFGCMSCIGGFS----QGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLG 92 (221)
Q Consensus 17 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g 92 (221)
..++++|++++||+||++|+|++++++..... ....+++.+++++|+++++.+++++++||||+|||||+++++.|
T Consensus 56 ~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g 135 (304)
T 3cn5_A 56 KLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLAR 135 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhC
Confidence 45688999999999999999999998875331 12346678999999999999999999999999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHhhhhccch-----------------hHHHHHHHHHHhH-hhhc-----ccC--CC-
Q psy10345 93 DISVADALVYVMAQLIGAVLGYATLGHHGIPM-----------------LWQSEVLKFIFPW-LNLV-----EVE--VT- 146 (221)
Q Consensus 93 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-----------------~~~~~~~E~~~t~-Lv~~-----~~~--~~- 146 (221)
+++|++++.|+++|++||++|+.++ +.++++ ..++++.|+++|+ |+++ +++ ..
T Consensus 136 ~~~~~~~~~YiiAQ~lGAi~Ga~lv-~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~ 214 (304)
T 3cn5_A 136 KVELLRALVYMIAQCLGAICGVGLV-KAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARD 214 (304)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHH-HHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCccCCCC
Confidence 9999999999999999999999999 888753 5689999999999 8887 222 12
Q ss_pred C----cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccc---cCcccceeecchhhhHHHHHHHHHHHHhhcCcc
Q psy10345 147 G----GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFI---NNIWTKQWIYWTAPTLAGTVTPLIYTYAFERKR 216 (221)
Q Consensus 147 ~----~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~---~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~ 216 (221)
. +.|+.||+.+.+.++..+++||+++||||||||+++ .++|+++|+||++|++|+++++++|++++.++.
T Consensus 215 ~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~~ 291 (304)
T 3cn5_A 215 SHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAAA 291 (304)
T ss_dssp SCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCCC
T ss_pred cccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCCC
Confidence 2 899999999999999999999999999999999999 568999999999999999999999999987654
No 8
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=6.8e-49 Score=331.72 Aligned_cols=197 Identities=30% Similarity=0.475 Sum_probs=177.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcch
Q psy10345 17 FIHRALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISV 96 (221)
Q Consensus 17 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~ 96 (221)
..++++|++++||+||++|+++++++....... ..+++.+++++|+++++.++.++++||+|+|||||++.++.|+++|
T Consensus 5 ~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~-~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~ 83 (263)
T 2b6o_A 5 RSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSL 83 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSS-SCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCH
Confidence 345678999999999999999999988643222 3456788999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccch----------------hHHHHHHHHHHhH-hhhc-----ccC---CCCcHHH
Q psy10345 97 ADALVYVMAQLIGAVLGYATLGHHGIPM----------------LWQSEVLKFIFPW-LNLV-----EVE---VTGGGGV 151 (221)
Q Consensus 97 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----------------~~~~~~~E~~~t~-Lv~~-----~~~---~~~~~~~ 151 (221)
.+++.|+++|++||++|+.++ +.++++ ..++++.|+++|+ |+++ +++ .....|+
T Consensus 84 ~~~~~Yi~AQ~lGa~~ga~l~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl 162 (263)
T 2b6o_A 84 LRAICYVVAQLLGAVAGAAVL-YSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVAL 162 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCSSCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHH
Confidence 999999999999999999999 888763 5789999999999 8887 322 3568999
Q ss_pred HHHHHHHHHHHHhcCCCccCcchhhhhhhccccCcccceeecchhhhHHHHHHHHHHHHhhcCc
Q psy10345 152 GSIATYYQLYQVNGPYTGASMNAARSIAPAFINNIWTKQWIYWTAPTLAGTVTPLIYTYAFERK 215 (221)
Q Consensus 152 ~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~ 215 (221)
.||+.+.+.++..+++||++|||||||||++++++|+++|+||++|++|+++++++|++++.++
T Consensus 163 ~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 163 AVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp HHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999999999999999999999987654
No 9
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.6e-49 Score=333.15 Aligned_cols=195 Identities=27% Similarity=0.339 Sum_probs=171.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccC--CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCc
Q psy10345 17 FIHRALEICLAEILGTFGLMFFGCMSCIGGFSQ--GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDI 94 (221)
Q Consensus 17 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~--~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~ 94 (221)
..++++|++++||+||++|++++|++....... ...+++.+++++|+++++.+++++++||||+|||||+++++.|++
T Consensus 25 ~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 104 (256)
T 3llq_A 25 QSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRF 104 (256)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCC
Confidence 345789999999999999999999987643322 235678899999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhccch-----------------------hHHHHHHHHHHhH-hhhc-----c-cC
Q psy10345 95 SVADALVYVMAQLIGAVLGYATLGHHGIPM-----------------------LWQSEVLKFIFPW-LNLV-----E-VE 144 (221)
Q Consensus 95 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-----------------------~~~~~~~E~~~t~-Lv~~-----~-~~ 144 (221)
+|++++.|+++|++||++|+.++ +.++++ ..++++.|+++|+ |+++ + +.
T Consensus 105 ~~~~~~~YiiAQ~lGA~~ga~lv-~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~ 183 (256)
T 3llq_A 105 PASSLVPYVIAQVAGAIVAAAAL-YVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRV 183 (256)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHH-HHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHHSTTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999 876521 4579999999999 8887 3 33
Q ss_pred CCCcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCc--ccceeecchhhhHHHHHHHHHHHHhh
Q psy10345 145 VTGGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNI--WTKQWIYWTAPTLAGTVTPLIYTYAF 212 (221)
Q Consensus 145 ~~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~--~~~~wvy~~~p~~Ga~la~~~~~~~~ 212 (221)
...+.|+.||+.+.++.+..+++||++|||||||||+++.++ |+++|+||++|++|+++++++|+++.
T Consensus 184 ~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 184 PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 456899999999999999999999999999999999999875 56899999999999999999999885
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=3.2e-49 Score=328.82 Aligned_cols=194 Identities=27% Similarity=0.396 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccC--CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhh
Q psy10345 21 ALEICLAEILGTFGLMFFGCMSCIGGFSQ--GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVAD 98 (221)
Q Consensus 21 ~~~~~~~EfigT~~lv~~~~~~~~~~~~~--~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~ 98 (221)
++|++++||+||++|+++++++....... ...+++.+++++|+++++.+++++++||||+|||||+++++.|+++|++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 57999999999999999999987543322 1346778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccch-------------------------hHHHHHHHHHHhH-hhhc-----cc-CCC
Q psy10345 99 ALVYVMAQLIGAVLGYATLGHHGIPM-------------------------LWQSEVLKFIFPW-LNLV-----EV-EVT 146 (221)
Q Consensus 99 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~-------------------------~~~~~~~E~~~t~-Lv~~-----~~-~~~ 146 (221)
++.|+++|++||++|+.++ +.++++ ..++++.|+++|+ |+++ ++ ..+
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~-~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~~ 162 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALL-YLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPA 162 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHTSTTSCT
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 9999999999999999999 877541 4679999999999 8887 32 345
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccCc--ccceeecchhhhHHHHHHHHHHHHhhcCc
Q psy10345 147 GGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINNI--WTKQWIYWTAPTLAGTVTPLIYTYAFERK 215 (221)
Q Consensus 147 ~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~~--~~~~wvy~~~p~~Ga~la~~~~~~~~~~~ 215 (221)
...|+.||+.+.+.++..+++||+++||||||||+++.++ |+++|+||++|++|+++++++|+++++++
T Consensus 163 ~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~~ 233 (234)
T 2o9g_A 163 GFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKR 233 (234)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred chHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999999999999999999875 55999999999999999999999998654
No 11
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=9.8e-49 Score=330.21 Aligned_cols=199 Identities=23% Similarity=0.206 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccC-CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchh
Q psy10345 19 HRALEICLAEILGTFGLMFFGCMSCIGGFSQ-GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVA 97 (221)
Q Consensus 19 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~ 97 (221)
++++|++++||+||++|+|+++++..+.... ...+++.+++++|+++++.+++++++||||+|||||+++++.|+++|+
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 86 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLK 86 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHH
Confidence 4568999999999999999999987653321 134677899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhccch---------------------hHHHHHHHHHHhH-hhhc-----ccC----CC
Q psy10345 98 DALVYVMAQLIGAVLGYATLGHHGIPM---------------------LWQSEVLKFIFPW-LNLV-----EVE----VT 146 (221)
Q Consensus 98 ~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---------------------~~~~~~~E~~~t~-Lv~~-----~~~----~~ 146 (221)
+++.|+++|++||++|+.++ +.++++ ..++++.|+++|+ |+++ +++ ..
T Consensus 87 ~~~~Yi~AQ~lGa~~ga~l~-~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~ 165 (258)
T 3c02_A 87 KIPVYFFAQLLGAFVGTSTV-YGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFH 165 (258)
T ss_dssp GHHHHHHHHHHHHHHHHHHH-HHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCccc
Confidence 99999999999999999999 888753 2348999999999 8887 322 33
Q ss_pred CcH-HHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC------cc----cceeecchhhhHHHHHHHHHHHHhhcCc
Q psy10345 147 GGG-GVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN------IW----TKQWIYWTAPTLAGTVTPLIYTYAFERK 215 (221)
Q Consensus 147 ~~~-~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~------~~----~~~wvy~~~p~~Ga~la~~~~~~~~~~~ 215 (221)
.+. |+.||+.+.+.++..+++||++|||||||||+++++ +| +|+|+||++|++|+++++++|++++.++
T Consensus 166 ~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~ 245 (258)
T 3c02_A 166 ILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPL 245 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhccc
Confidence 477 999999999999999999999999999999999872 34 6799999999999999999999998765
Q ss_pred ccc
Q psy10345 216 RLE 218 (221)
Q Consensus 216 ~~~ 218 (221)
+++
T Consensus 246 ~~~ 248 (258)
T 3c02_A 246 VDL 248 (258)
T ss_dssp HHH
T ss_pred CCC
Confidence 543
No 12
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=5.7e-48 Score=329.22 Aligned_cols=198 Identities=22% Similarity=0.249 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccC-CCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchh
Q psy10345 19 HRALEICLAEILGTFGLMFFGCMSCIGGFSQ-GSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVA 97 (221)
Q Consensus 19 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~ 97 (221)
++++|++++||+||++|++++++++.+.... ...+.+.+++++|+++++.+++++++||||+|||||+++++.|+++|+
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 84 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKR 84 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHH
Confidence 3568999999999999999999887653321 133455689999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhccch----------------------------------hHHHHHHHHHHhH-hhhc-
Q psy10345 98 DALVYVMAQLIGAVLGYATLGHHGIPM----------------------------------LWQSEVLKFIFPW-LNLV- 141 (221)
Q Consensus 98 ~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----------------------------------~~~~~~~E~~~t~-Lv~~- 141 (221)
+++.|+++|++||++|+.++ +.++++ ..++++.|+++|+ |+++
T Consensus 85 ~~~~Yi~AQ~lGA~~ga~l~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~i 163 (281)
T 1ldf_A 85 KVIPFIVSQVAGAFCAAALV-YGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLI 163 (281)
T ss_dssp THHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 877631 4578999999999 8887
Q ss_pred ----ccCC----CCcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-------ccc------ceeecchhhhHH
Q psy10345 142 ----EVEV----TGGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-------IWT------KQWIYWTAPTLA 200 (221)
Q Consensus 142 ----~~~~----~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-------~~~------~~wvy~~~p~~G 200 (221)
++++ ..+.|+.||+.+.++++..+++||++|||||||||+++.. .|+ |+|+||++|++|
T Consensus 164 l~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~G 243 (281)
T 1ldf_A 164 LALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVG 243 (281)
T ss_dssp HHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHH
T ss_pred HHHhccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHHH
Confidence 3322 3589999999999999999999999999999999999861 232 799999999999
Q ss_pred HHHHHHHHHHhhcCccc
Q psy10345 201 GTVTPLIYTYAFERKRL 217 (221)
Q Consensus 201 a~la~~~~~~~~~~~~~ 217 (221)
+++++++|++++.++.+
T Consensus 244 a~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 244 AIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHTGGGC-
T ss_pred HHHHHHHHHHHhCccCC
Confidence 99999999999876554
No 13
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=4.4e-47 Score=318.31 Aligned_cols=193 Identities=27% Similarity=0.474 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc---cC---------------CCCCchhhhHHHHHHHHHHHHhhcccCCcccC
Q psy10345 20 RALEICLAEILGTFGLMFFGCMSCIGGF---SQ---------------GSVPSLQPALMFGFVVSTIITIFGHISSAHLN 81 (221)
Q Consensus 20 ~~~~~~~~EfigT~~lv~~~~~~~~~~~---~~---------------~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~N 81 (221)
+++|++++||+||++|+|+++++..... +. ...+++.+++++|+++++.+++++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4579999999999999999998877532 10 01123458999999999999999999999999
Q ss_pred hHHHHHHHHhcCcchhhHHHHHHHHHHHHHHHHHHhhhhccch------------------hHHHHHHHHHHhH-hhhc-
Q psy10345 82 PSVTVAAFMLGDISVADALVYVMAQLIGAVLGYATLGHHGIPM------------------LWQSEVLKFIFPW-LNLV- 141 (221)
Q Consensus 82 PaVTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~------------------~~~~~~~E~~~t~-Lv~~- 141 (221)
||||+++++.|+++|++++.|+++|++||++|+.++ +.++++ ..+.++.|+++|+ |+++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~-~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i 161 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIF-LQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITI 161 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHH-HHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHhee
Confidence 999999999999999999999999999999999999 887643 5689999999999 8887
Q ss_pred -----c-cCCCCcHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccc--c----CcccceeecchhhhHHHHHHHHHHH
Q psy10345 142 -----E-VEVTGGGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFI--N----NIWTKQWIYWTAPTLAGTVTPLIYT 209 (221)
Q Consensus 142 -----~-~~~~~~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~--~----~~~~~~wvy~~~p~~Ga~la~~~~~ 209 (221)
+ +......|+.+|+.+.+.++..+++||+++|||||+||++. . .+|+|+|+||++|++|+++++++|+
T Consensus 162 ~~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~ 241 (246)
T 2f2b_A 162 MGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQ 241 (246)
T ss_dssp HHHTTSTTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCCCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHH
Confidence 2 22356899999999999999999999999999999999992 2 4788999999999999999999999
Q ss_pred Hhhc
Q psy10345 210 YAFE 213 (221)
Q Consensus 210 ~~~~ 213 (221)
.+++
T Consensus 242 ~l~~ 245 (246)
T 2f2b_A 242 YLTS 245 (246)
T ss_dssp HHTC
T ss_pred HHcC
Confidence 9875
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.52 E-value=4.1e-14 Score=118.05 Aligned_cols=100 Identities=29% Similarity=0.382 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHH-----hcC
Q psy10345 19 HRALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFM-----LGD 93 (221)
Q Consensus 19 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l-----~g~ 93 (221)
.+.++.++.|+++|++|++.+++...+.+. +....++.+|+.+....+..+++||+|+|||+|++..+ .++
T Consensus 141 ~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~----~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~ 216 (246)
T 2f2b_A 141 ISYWQAMLAEVVGTFLLMITIMGIAVDERA----PKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGT 216 (246)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSTTS----CTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_pred cchHHHHHHHHHHHHHHHheeeEEecCCCC----CCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCC
Confidence 356799999999999999998876543221 12246889999999999999999999999999999888 346
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccc
Q psy10345 94 ISVADALVYVMAQLIGAVLGYATLGHHGIP 123 (221)
Q Consensus 94 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 123 (221)
..|.+.++|+++|++|+++|+.+. +.+.+
T Consensus 217 ~~w~~~~vy~vap~~Ga~laa~~y-~~l~~ 245 (246)
T 2f2b_A 217 DLWNYYSIYVIGPIVGAVLAALTY-QYLTS 245 (246)
T ss_dssp CCGGGTTHHHHHHHHHHHHHHHHH-HHHTC
T ss_pred CCcceEEEeeeHHHHHHHHHHHHH-HHHcC
Confidence 678899999999999999999988 66543
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.36 E-value=7.2e-13 Score=111.47 Aligned_cols=91 Identities=14% Similarity=0.094 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHhH-hhhc------ccCCCC----cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-cccceee
Q psy10345 125 LWQSEVLKFIFPW-LNLV------EVEVTG----GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-IWTKQWI 192 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~------~~~~~~----~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-~~~~~wv 192 (221)
..+.++.|+++|+ |+++ +.+... ..++..|+.+.+.++..+++||+++|||++++.++.++ +|...|.
T Consensus 9 ~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~~ 88 (263)
T 2b6o_A 9 FWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAIC 88 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHHH
Confidence 4578999999999 8887 212221 24677889999999999999999999999999999876 7999999
Q ss_pred cchhhhHHHHHHHHHHHHhhcCc
Q psy10345 193 YWTAPTLAGTVTPLIYTYAFERK 215 (221)
Q Consensus 193 y~~~p~~Ga~la~~~~~~~~~~~ 215 (221)
|+++|++|+++++.+.+.++.++
T Consensus 89 Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 89 YVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHcccc
Confidence 99999999999999999998754
No 16
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.18 E-value=3e-11 Score=103.21 Aligned_cols=91 Identities=16% Similarity=0.150 Sum_probs=77.5
Q ss_pred hHHHHHHHHHHhH-hhhc------c--cC--C--CC--cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-ccc
Q psy10345 125 LWQSEVLKFIFPW-LNLV------E--VE--V--TG--GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-IWT 188 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~------~--~~--~--~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-~~~ 188 (221)
..+.++.|+++|+ |++. + .. . .+ ...+..|+.+.+.+++.+++||+++|||.+++..+.+. .|.
T Consensus 12 ~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~ 91 (301)
T 2zz9_A 12 FWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIA 91 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCHH
Confidence 5688999999999 8887 1 11 1 11 35677889999999999999999999999999999877 799
Q ss_pred ceeecchhhhHHHHHHHHHHHHhhcCc
Q psy10345 189 KQWIYWTAPTLAGTVTPLIYTYAFERK 215 (221)
Q Consensus 189 ~~wvy~~~p~~Ga~la~~~~~~~~~~~ 215 (221)
....|+++|++|+++|+.+.+.++.++
T Consensus 92 ~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 118 (301)
T 2zz9_A 92 KSVFYITAQCLGAIIGAGILYLVTPPS 118 (301)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999888654
No 17
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.18 E-value=2e-11 Score=102.47 Aligned_cols=91 Identities=19% Similarity=0.099 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHhH-hhhc------c---cC-CCC--cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-cccce
Q psy10345 125 LWQSEVLKFIFPW-LNLV------E---VE-VTG--GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-IWTKQ 190 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~------~---~~-~~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-~~~~~ 190 (221)
..+.++.|+++|+ |++. + .+ ... ...+..|+.+.+.++..+++||+++|||.+++..+.++ +|...
T Consensus 9 ~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~ 88 (258)
T 3c02_A 9 YVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKKI 88 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHHH
Confidence 5678999999999 8886 1 11 122 24566788999999999999999999999999999877 79999
Q ss_pred eecchhhhHHHHHHHHHHHHhhcCc
Q psy10345 191 WIYWTAPTLAGTVTPLIYTYAFERK 215 (221)
Q Consensus 191 wvy~~~p~~Ga~la~~~~~~~~~~~ 215 (221)
..|+++|++|+++++.+.+.++.++
T Consensus 89 ~~Yi~AQ~lGa~~ga~l~~~~~~~~ 113 (258)
T 3c02_A 89 PVYFFAQLLGAFVGTSTVYGLYHGF 113 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcchh
Confidence 9999999999999999988887654
No 18
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.14 E-value=1.7e-11 Score=100.72 Aligned_cols=90 Identities=16% Similarity=0.131 Sum_probs=75.1
Q ss_pred HHHHHHHHHHhH-hhhc------c--cCC--C--C--cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-cccc
Q psy10345 126 WQSEVLKFIFPW-LNLV------E--VEV--T--G--GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-IWTK 189 (221)
Q Consensus 126 ~~~~~~E~~~t~-Lv~~------~--~~~--~--~--~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-~~~~ 189 (221)
++.++.|+++|+ |++. + ++. . + ...+..|+.+...++..+++||+++|||.+++..+.++ +|..
T Consensus 4 ~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (223)
T 3gd8_A 4 WKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAK 83 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCHHH
Confidence 578999999999 8886 1 111 1 1 34566789999999999999999999999999999876 7899
Q ss_pred eeecchhhhHHHHHHHHHHHHhhcCc
Q psy10345 190 QWIYWTAPTLAGTVTPLIYTYAFERK 215 (221)
Q Consensus 190 ~wvy~~~p~~Ga~la~~~~~~~~~~~ 215 (221)
...|+++|++|+++++.+.+.+++++
T Consensus 84 ~~~Yi~AQ~lGA~~ga~lv~~~~~~~ 109 (223)
T 3gd8_A 84 SVFYIAAQCLGAIIGAGILYLVTPPS 109 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99999999999999999988877543
No 19
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.12 E-value=5.1e-11 Score=100.57 Aligned_cols=90 Identities=17% Similarity=0.195 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHhH-hhhc------cc-------CCC----C--cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhcccc
Q psy10345 125 LWQSEVLKFIFPW-LNLV------EV-------EVT----G--GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFIN 184 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~------~~-------~~~----~--~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~ 184 (221)
..+.++.|+++|+ |++. +. +.. . ...+..|+.+.+.++..+++||+++|||.+++..+.+
T Consensus 10 ~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g 89 (271)
T 1j4n_A 10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSC 89 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHcC
Confidence 4578999999999 8876 10 111 1 3466778899999999999999999999999999987
Q ss_pred C-cccceeecchhhhHHHHHHHHHHHHhhcC
Q psy10345 185 N-IWTKQWIYWTAPTLAGTVTPLIYTYAFER 214 (221)
Q Consensus 185 ~-~~~~~wvy~~~p~~Ga~la~~~~~~~~~~ 214 (221)
+ .|.....|+++|++|+++++.+.+.++.+
T Consensus 90 ~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 90 QISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 7 79999999999999999999998888754
No 20
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.12 E-value=2.2e-11 Score=103.31 Aligned_cols=91 Identities=13% Similarity=-0.043 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHhH-hhhc----------ccCCCC--cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-cccce
Q psy10345 125 LWQSEVLKFIFPW-LNLV----------EVEVTG--GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-IWTKQ 190 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~----------~~~~~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-~~~~~ 190 (221)
..+.++.|+++|+ |++. ++...+ ...+..|+.+.+.++..+++||+++|||.+++..+.++ .|...
T Consensus 7 ~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~ 86 (281)
T 1ldf_A 7 LKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKV 86 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHHH
Confidence 4578999999999 8886 111111 24666789999999999999999999999999999887 79999
Q ss_pred eecchhhhHHHHHHHHHHHHhhcCc
Q psy10345 191 WIYWTAPTLAGTVTPLIYTYAFERK 215 (221)
Q Consensus 191 wvy~~~p~~Ga~la~~~~~~~~~~~ 215 (221)
..|+++|++|+++++.+.+.++.++
T Consensus 87 ~~Yi~AQ~lGA~~ga~l~~~~~~~~ 111 (281)
T 1ldf_A 87 IPFIVSQVAGAFCAAALVYGLYYNL 111 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999988877643
No 21
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.12 E-value=3.3e-11 Score=104.02 Aligned_cols=91 Identities=16% Similarity=0.145 Sum_probs=75.8
Q ss_pred hHHHHHHHHHHhH-hhhc------c--cCC--C--C--cHHHHHHHHHHHHHHHhcCCCccCcchhhhhhhccccC-ccc
Q psy10345 125 LWQSEVLKFIFPW-LNLV------E--VEV--T--G--GGGVGSIATYYQLYQVNGPYTGASMNAARSIAPAFINN-IWT 188 (221)
Q Consensus 125 ~~~~~~~E~~~t~-Lv~~------~--~~~--~--~--~~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~~~~l~~~-~~~ 188 (221)
.++.++.|+++|+ |++. + .+. . + ...+..|+++.+.+++.+.+||+++|||.+++.++.++ .|.
T Consensus 51 l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~ 130 (340)
T 3iyz_A 51 FWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIA 130 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHH
Confidence 4678999999999 8886 1 111 1 1 34667789999999999999999999999999999876 789
Q ss_pred ceeecchhhhHHHHHHHHHHHHhhcCc
Q psy10345 189 KQWIYWTAPTLAGTVTPLIYTYAFERK 215 (221)
Q Consensus 189 ~~wvy~~~p~~Ga~la~~~~~~~~~~~ 215 (221)
....|+++|++|+++|+.+.+.++.++
T Consensus 131 ~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 131 KSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 999999999999999999988777543
No 22
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.08 E-value=5e-10 Score=92.60 Aligned_cols=98 Identities=14% Similarity=0.255 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHh-cCcchh
Q psy10345 19 HRALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFML-GDISVA 97 (221)
Q Consensus 19 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~-g~~~~~ 97 (221)
.+.++.++.|+++|++|++..+..... + . +.-..++.+|+.+.......++.||+-+|||.+++..+. |+.+|.
T Consensus 132 ~~~~~~~~~E~i~T~~Lv~~i~~~~d~-~-~---~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~ 206 (234)
T 2o9g_A 132 YSMLSALVVELVLSAGFLLVIHGATDK-F-A---PAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALE 206 (234)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTST-T-S---CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCC-C-C---ccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCc
Confidence 356789999999999999998865431 1 1 122468899999999999999999999999999998776 455677
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcc
Q psy10345 98 DALVYVMAQLIGAVLGYATLGHHGI 122 (221)
Q Consensus 98 ~~~~yi~aQ~~Ga~~g~~~~~~~~~ 122 (221)
..++|++++++|+++|+.+. +.+.
T Consensus 207 ~~Wv~~vgP~~Ga~la~~~y-~~~~ 230 (234)
T 2o9g_A 207 QLWFFWVVPIVGGIIGGLIY-RTLL 230 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHH-HHHT
T ss_pred eeeeeehHHhHHHHHHHHHH-HHHc
Confidence 99999999999999999987 5544
No 23
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.07 E-value=3.5e-10 Score=94.56 Aligned_cols=98 Identities=16% Similarity=0.200 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHh-cCcchhh
Q psy10345 20 RALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFML-GDISVAD 98 (221)
Q Consensus 20 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~-g~~~~~~ 98 (221)
+..+.++.|+++|++|+++.++...... .....++.+|+.+.......++.||+-+|||.+++..+. |..+|..
T Consensus 156 s~~~~f~~E~i~Tf~Lv~~il~~~d~~~-----~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~ 230 (256)
T 3llq_A 156 SLVSALLIEIILTAFFLIVILGSTHGRV-----PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQ 230 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHSTTS-----CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCCC-----CccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccc
Confidence 5678999999999999998876543211 112468889999999999999999999999999998875 5556778
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccc
Q psy10345 99 ALVYVMAQLIGAVLGYATLGHHGIP 123 (221)
Q Consensus 99 ~~~yi~aQ~~Ga~~g~~~~~~~~~~ 123 (221)
.++|++++++|+++|+.+. +.+.+
T Consensus 231 ~WVy~vgPi~Ga~la~~~y-~~l~~ 254 (256)
T 3llq_A 231 LWLFWLAPIVGGAAGAVIW-KLFGE 254 (256)
T ss_dssp TTHHHHHHHHHHHHHHHHH-HHHTS
T ss_pred eeeeeeHHHHHHHHHHHHH-HHhcc
Confidence 9999999999999999987 66543
No 24
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.05 E-value=2.8e-10 Score=97.37 Aligned_cols=102 Identities=21% Similarity=0.202 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCC--chhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHh--cCcc
Q psy10345 20 RALEICLAEILGTFGLMFFGCMSCIGGFSQGSVP--SLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFML--GDIS 95 (221)
Q Consensus 20 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~--~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~--g~~~ 95 (221)
+.++.++.|+++||+|++..+......+.. ..+ ....++.+|+.+.......++.||+.+|||.+++..+. +..+
T Consensus 183 s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~-~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~ 261 (304)
T 3cn5_A 183 NKGTALGAEIIGTFVLVYTVFSATDPKRSA-RDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKV 261 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTEEEEEES-TTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhheecCccCC-CCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCC
Confidence 457899999999999999988443222211 111 22468899999999999999999999999999999887 3457
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhccc
Q psy10345 96 VADALVYVMAQLIGAVLGYATLGHHGIP 123 (221)
Q Consensus 96 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 123 (221)
|.+.++|++++++|+++|+++. +.+..
T Consensus 262 w~~~WvywvgPiiGa~laa~~y-~~l~~ 288 (304)
T 3cn5_A 262 WDDQWIFWVGPFIGAAVAAAYH-QYVLR 288 (304)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHH-HTTSC
T ss_pred cCceEEEeehHHHHHHHHHHHH-HHHhC
Confidence 8899999999999999999998 66543
No 25
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.05 E-value=6.9e-10 Score=93.37 Aligned_cols=98 Identities=18% Similarity=0.185 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhh-
Q psy10345 20 RALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVAD- 98 (221)
Q Consensus 20 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~- 98 (221)
+..+.++.|+++|++|++..++.....+ ....+ ..++.+|+.+.+.....++.||+.+|||.+++..+... +|.+
T Consensus 128 s~~~~~~~E~i~Tf~Lv~~il~~~d~~~-~~~~~--~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~~ 203 (266)
T 3d9s_A 128 TQGQAMVVELILTFQLALCIFASTDSRR-TSPVG--SPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-RFSPA 203 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCTTC-CSCCC--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT-CCCTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcccC-CCccc--hHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC-CcccC
Confidence 4578899999999999999887642211 11112 36788888888888889999999999999999988654 7888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcc
Q psy10345 99 ALVYVMAQLIGAVLGYATLGHHGI 122 (221)
Q Consensus 99 ~~~yi~aQ~~Ga~~g~~~~~~~~~ 122 (221)
.++|++++++|+++|+++. +.+.
T Consensus 204 ~Wvy~vgP~~Ga~la~~~y-~~l~ 226 (266)
T 3d9s_A 204 HWVFWVGPIVGAVLAAILY-FYLL 226 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHTT
T ss_pred EeeeehHHHHHHHHHHHHH-HHHh
Confidence 9999999999999999998 6554
No 26
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.00 E-value=1.3e-09 Score=92.23 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhH
Q psy10345 20 RALEICLAEILGTFGLMFFGCMSCIGGFSQGSVPSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADA 99 (221)
Q Consensus 20 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~ 99 (221)
+..+.++.|+++|++|++..++.....+ ......++.+|+.+.......++.||+.+|||.+++..+....-+...
T Consensus 167 s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~----~~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~ 242 (279)
T 2w2e_A 167 SRTRGLFLEAFGTAILCLTVLMLAVEKH----RATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYH 242 (279)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTSCS----TTGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccCCC----CCcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhh
Confidence 4578899999999999999887644322 122246888999999999999999999999999999999875444568
Q ss_pred HHHHHHHHHHHHHHHHHhhhhc
Q psy10345 100 LVYVMAQLIGAVLGYATLGHHG 121 (221)
Q Consensus 100 ~~yi~aQ~~Ga~~g~~~~~~~~ 121 (221)
++|++++++|+++|+++. +.+
T Consensus 243 WVy~vgPiiGa~la~~ly-~~l 263 (279)
T 2w2e_A 243 WIYWLGPILGAFLAYSIW-QMW 263 (279)
T ss_dssp THHHHHHHHHHHHHHHHH-HHH
T ss_pred hHHHHHHHHHHHHHHHHH-HHH
Confidence 899999999999999987 554
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=89.95 E-value=5.4 Score=33.21 Aligned_cols=61 Identities=11% Similarity=0.121 Sum_probs=37.2
Q ss_pred chhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhHHHHHHHHHHHHHHHHHHh
Q psy10345 54 SLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADALVYVMAQLIGAVLGYATL 117 (221)
Q Consensus 54 ~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~ 117 (221)
.+..++.+.+++...+..-+..--+ |--.+ ...+.||.++.+.+--+.-=.+|=++|+.+.
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg--n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~ 128 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS--TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLF 128 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT--THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc--chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556778888888888776654333 42333 4456888888777655554445555555444
No 28
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=87.88 E-value=4.6 Score=33.39 Aligned_cols=63 Identities=19% Similarity=0.246 Sum_probs=40.2
Q ss_pred CchhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhHHHHHHHHHHHHHHHHHHh
Q psy10345 53 PSLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADALVYVMAQLIGAVLGYATL 117 (221)
Q Consensus 53 ~~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~ 117 (221)
..+..++.+.+++...+..-+..--+ |-.....-++.||.++.+.+--+.-=.+|=++|+.+.
T Consensus 63 ~~ll~g~~F~~Gl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~ 125 (268)
T 3tds_E 63 TKIVMGLSFAIALSLVIMTGTELFTG--NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVL 125 (268)
T ss_dssp HHHHHHHTCTHHHHHHHHHTCCCHHH--HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCcccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556777777877777754432211 4343334568899999888777666666666666665
No 29
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=81.70 E-value=14 Score=30.28 Aligned_cols=62 Identities=15% Similarity=0.219 Sum_probs=36.7
Q ss_pred chhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhHHHHHHHHHHHHHHHHHHh
Q psy10345 54 SLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADALVYVMAQLIGAVLGYATL 117 (221)
Q Consensus 54 ~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~ 117 (221)
.+..++.+.+++...+..-+..--+ |-.....-.+.||.++++.+--+.-=.+|=++|+.+.
T Consensus 58 ~ll~g~~F~vGl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~ 119 (261)
T 4fc4_A 58 PLVMGATFGIALTLVIIAGSELFTG--HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFV 119 (261)
T ss_dssp HHHHHHHTTHHHHHHHHTCCCCHHH--HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556777777777777653332111 5443334566788998888777655555555555544
No 30
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=67.59 E-value=51 Score=27.15 Aligned_cols=61 Identities=18% Similarity=0.200 Sum_probs=38.4
Q ss_pred chhhhHHHHHHHHHHHHhhcccCCcccChHHHHHHHHhcCcchhhHHHHHHHHHHHHHHHHHHh
Q psy10345 54 SLQPALMFGFVVSTIITIFGHISSAHLNPSVTVAAFMLGDISVADALVYVMAQLIGAVLGYATL 117 (221)
Q Consensus 54 ~~~~~l~~g~~~~~~i~~~~~iSGah~NPaVTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~ 117 (221)
.+..++.+.+++...+..-+..--++.= .+ ...+.||.++.+.+--+.-=.+|=++|+.+.
T Consensus 67 ~ll~g~~F~vGL~lVvl~g~ELFTgn~l--~~-~~~~~~~is~~~~lr~W~~v~~gNliGal~~ 127 (280)
T 3kly_A 67 KLLGGLAFSLGLILVVITGGELFTSSVL--IL-VAKASGKISWKELVRNWTVVYFGNLCGSIIL 127 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCTTTTCC--CC-SSSSSSSCCSSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccccccccchH--HH-HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777888888888776654333311 22 2355788898887766666666666666655
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=56.58 E-value=1.4 Score=37.48 Aligned_cols=22 Identities=14% Similarity=0.191 Sum_probs=17.8
Q ss_pred hcccCCcccChHHHHHHHHhcC
Q psy10345 72 FGHISSAHLNPSVTVAAFMLGD 93 (221)
Q Consensus 72 ~~~iSGah~NPaVTla~~l~g~ 93 (221)
.+.-||||+|||++++..+..+
T Consensus 8 ~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 8 MAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHT
T ss_pred EcCCCHHHHHHHHHHHHHHHhC
Confidence 3445889999999999998753
Done!