BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10346
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W3J5|SYFA_DROME Probable phenylalanine--tRNA ligase alpha subunit OS=Drosophila
melanogaster GN=CG2263 PE=2 SV=1
Length = 498
Score = 345 bits (885), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/284 (60%), Positives = 211/284 (74%), Gaps = 3/284 (1%)
Query: 1 MASDLTEKILKYLDTNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWE 60
M DLTE+IL++L+T DTLDLA LF EDHQK+VG +KSI+ GE + E ++HK
Sbjct: 1 MHPDLTERILQHLETTDKADTLDLAALFAEDHQKIVGSLKSIQAHGELVTAETVTHKSLG 60
Query: 61 LTGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATF-PNAKVGFSKAMAKGWISLDKATG 119
LT EG V +NGSHE LV++ VP EGI Q L+A NAKVGFSKAM+ GWI +DK+
Sbjct: 61 LTDEGRAVVENGSHEALVYDLVPPEGIAQAALMAAGGANAKVGFSKAMSHGWILVDKSVT 120
Query: 120 K--VLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLKKGPEF 177
V RKVD++TD ++ L+ +A + D++P D+KKRKLLQE T KSF+L +GPEF
Sbjct: 121 PPLVRRKVDTITDVVRNQLQQVALGKGDQLPAKEVADFKKRKLLQETTTKSFVLARGPEF 180
Query: 178 STTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDM 237
+TT+ K ET+LT EM+A+G W L FK YNFDA+G GHLHPL+KVR EFRQIFL+M
Sbjct: 181 ATTLTKLETDLTVEMLANGLWDQLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEM 240
Query: 238 GFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTS 281
GF+EMPTNN+VESSFWNFDAL+QPQQHPARDAHDTFFV P S
Sbjct: 241 GFSEMPTNNYVESSFWNFDALYQPQQHPARDAHDTFFVNHPAKS 284
>sp|Q7SYV0|SYFAB_XENLA Phenylalanine--tRNA ligase alpha subunit B OS=Xenopus laevis
GN=farsa-b PE=2 SV=1
Length = 499
Score = 320 bits (820), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 162/286 (56%), Positives = 206/286 (72%), Gaps = 7/286 (2%)
Query: 5 LTEKILKYLDT--NPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWELT 62
L+E++L+ L N VDTL+LA + + DHQ+VVG +KS++ LGE + E S K WEL+
Sbjct: 6 LSEQLLQRLQDGDNKGVDTLELAAVLSVDHQQVVGAVKSLQCLGEIIEAEQRSSKKWELS 65
Query: 63 GEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKATGK-- 120
EG ++ GSHE VF ++P EG+ Q EL+ P AKVGFSKAM+ WI LDKA
Sbjct: 66 SEGEEIAQVGSHEARVFQSLPKEGLLQAELM-KLPFAKVGFSKAMSNKWIRLDKAAAGGP 124
Query: 121 -VLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLKKGPEFST 179
V R V+++ D ++ L+LI D V E +K + KKRKL+ EVT+KS+ + KG FST
Sbjct: 125 CVYRVVETIEDTVKEKLQLILKGRADDVNEKDKNELKKRKLVNEVTVKSYWVTKGSGFST 184
Query: 180 TIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGF 239
+I K ET+LTPEMIASGSW+ FK YNF+A+G+ GHLHPL+KVR +FRQIFL+MGF
Sbjct: 185 SITKQETDLTPEMIASGSWREKQFKGYNFNALGVMPECGHLHPLLKVRTQFRQIFLEMGF 244
Query: 240 TEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTSETEF 285
TEMPTNNF+ESSFWNFDALFQPQQHPARD HDTFF+ DP + TEF
Sbjct: 245 TEMPTNNFIESSFWNFDALFQPQQHPARDQHDTFFLQDPALA-TEF 289
>sp|Q6AZG6|SYFAA_XENLA Phenylalanine--tRNA ligase alpha subunit A OS=Xenopus laevis
GN=farsa-a PE=2 SV=1
Length = 498
Score = 316 bits (810), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/288 (54%), Positives = 206/288 (71%), Gaps = 7/288 (2%)
Query: 3 SDLTEKILKYLD--TNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWE 60
+ ++E++L+ L + VD+L+LA L +HQ+VVG +KS++ LGE + E S K WE
Sbjct: 4 NSVSEQLLQRLQDGGSKGVDSLELAALLGVEHQQVVGAVKSLQCLGEIIQAEQRSSKKWE 63
Query: 61 LTGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKATG- 119
L+ EG ++ GSHE VF +P EG+ Q +L+ P +KVGFSKAM+ WI LDKA
Sbjct: 64 LSSEGEEIGREGSHEARVFQTLPKEGLLQAQLMKQ-PFSKVGFSKAMSNKWIRLDKAAEG 122
Query: 120 --KVLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLKKGPEF 177
++ R VDS+ D ++ L+LI D V E ++ + KKRKL+ EVT+KS+ + KG F
Sbjct: 123 GPRIYRVVDSIEDTVKEKLQLILKGRADDVNEKDRNELKKRKLVNEVTVKSYWVTKGSGF 182
Query: 178 STTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDM 237
ST+I K ET+LTPEMIASGSW+ FK YNFDA+G+ GHLHPL+KVR +FRQIFL+M
Sbjct: 183 STSITKQETDLTPEMIASGSWREKQFKGYNFDALGVMPECGHLHPLLKVRTQFRQIFLEM 242
Query: 238 GFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTSETEF 285
GFTEMPTNNF+ESSFWNFDALFQPQQHPARD HDTFF+ DP + TEF
Sbjct: 243 GFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDTFFLQDPALA-TEF 289
>sp|Q9Y285|SYFA_HUMAN Phenylalanine--tRNA ligase alpha subunit OS=Homo sapiens GN=FARSA
PE=1 SV=3
Length = 508
Score = 313 bits (803), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 202/278 (72%), Gaps = 5/278 (1%)
Query: 5 LTEKILKYLD-TNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWELTG 63
+ E +L+ L+ ++ +D+ +LA +HQ VVG +KS++ LGE + E S K WELT
Sbjct: 6 VAELLLRRLEASDGGLDSAELAAELGMEHQAVVGAVKSLQALGEVIEAELRSTKHWELTA 65
Query: 64 EGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKATG---K 120
EG ++ GSHE VF ++P EG+ Q EL+ P+ KVGFSKAM+ WI +DK+ +
Sbjct: 66 EGEEIAREGSHEARVFRSIPPEGLAQSELM-RLPSGKVGFSKAMSNKWIRVDKSAADGPR 124
Query: 121 VLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLKKGPEFSTT 180
V R VDS+ DE+Q L+L+ + +K+ E + + +KRKLL EVT+K++ + KG FST+
Sbjct: 125 VFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVTLKTYWVSKGSAFSTS 184
Query: 181 IQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFT 240
I K ETEL+PEMI+SGSW+ FKPYNF A G+ SGHLHPL+KVR++FRQIFL+MGFT
Sbjct: 185 ISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGFT 244
Query: 241 EMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDP 278
EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFF+ DP
Sbjct: 245 EMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDP 282
>sp|Q5RFA2|SYFA_PONAB Phenylalanine--tRNA ligase alpha subunit OS=Pongo abelii GN=FARSA
PE=2 SV=1
Length = 508
Score = 312 bits (799), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 201/278 (72%), Gaps = 5/278 (1%)
Query: 5 LTEKILKYLD-TNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWELTG 63
+ E +L+ L+ ++ +D+ +LA +HQ VVG +KS++ LGE + E S K WELT
Sbjct: 6 VAELLLRRLEASDGGLDSAELAAELGMEHQAVVGAVKSLQALGEVIEAELRSTKRWELTA 65
Query: 64 EGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKATG---K 120
EG ++ GSHE VF ++P EG+ Q EL+ P+ KVGFSKAM+ WI +DK+ +
Sbjct: 66 EGEEIAREGSHEARVFRSIPPEGLAQSELM-RLPSGKVGFSKAMSNKWIRVDKSAADGPR 124
Query: 121 VLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLKKGPEFSTT 180
V R VDS+ DE+Q L+L+ + +K+ E + + +KRKLL EV +K++ + KG FST+
Sbjct: 125 VFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVILKTYWVSKGSAFSTS 184
Query: 181 IQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFT 240
I K ETEL+PEMI+SGSW+ FKPYNF A G+ SGHLHPL+KVR++FRQIFL+MGFT
Sbjct: 185 ISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGFT 244
Query: 241 EMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDP 278
EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFF+ DP
Sbjct: 245 EMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDP 282
>sp|Q1JPX3|SYFA_DANRE Phenylalanine--tRNA ligase alpha subunit OS=Danio rerio GN=farsa
PE=2 SV=2
Length = 497
Score = 309 bits (792), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/280 (56%), Positives = 205/280 (73%), Gaps = 5/280 (1%)
Query: 3 SDLTEKILKYLDT-NPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWEL 61
+ L E +L+ ++ + VD+ D++ DHQ VVG +KS++ LGE + E S K WEL
Sbjct: 4 TGLLEALLQRVEQLDGGVDSQDVSAALGVDHQLVVGAVKSLQALGEVISAEQKSSKHWEL 63
Query: 62 TGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKA---T 118
TGEG ++ + GSHE VFN +P+EG+ Q +L+ + KVGFSKAM+ WI LDKA
Sbjct: 64 TGEGREIAEQGSHEARVFNAIPAEGLPQNQLM-KMASGKVGFSKAMSNKWIRLDKAHEGG 122
Query: 119 GKVLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLKKGPEFS 178
+V R V+S+ D ++ L+L+ N + K+ E K + KKRKLL EVT+KS+ + KG FS
Sbjct: 123 PRVFRTVESIEDTVRDKLQLVQNGQSAKLEEKEKNELKKRKLLAEVTVKSYWITKGNSFS 182
Query: 179 TTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMG 238
TTI K ETELTPEMIASG+WK FKPYNF+AMG++ GHLHPLMKVR +FRQIFL+MG
Sbjct: 183 TTITKQETELTPEMIASGNWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLEMG 242
Query: 239 FTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDP 278
FTEMPTNNF+ESSFWNFD+LFQPQQHPARD HDTFF++DP
Sbjct: 243 FTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFISDP 282
>sp|Q8C0C7|SYFA_MOUSE Phenylalanine--tRNA ligase alpha subunit OS=Mus musculus GN=Farsa
PE=2 SV=1
Length = 508
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 145/263 (55%), Positives = 191/263 (72%), Gaps = 4/263 (1%)
Query: 19 VDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWELTGEGNQVKDNGSHEVLV 78
+D+ +LA +HQ VVG +KS++ LGE + E S K WELT EG ++ GSHE V
Sbjct: 21 LDSAELATQLGVEHQAVVGAVKSLQALGEVIEAELRSTKCWELTTEGEEIAREGSHEARV 80
Query: 79 FNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKATG---KVLRKVDSVTDELQAH 135
F ++P EG+ Q EL+ P+ KVGFSKAM+ WI +DK+ +V R VDS+ DE+Q
Sbjct: 81 FRSIPLEGLVQSELM-HLPSGKVGFSKAMSNKWIRVDKSAADGPRVFRVVDSIEDEVQKR 139
Query: 136 LKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLKKGPEFSTTIQKPETELTPEMIAS 195
L+L+ + +K+ E + + +KRKLL EV +K++ + KG FST++ K E EL+PEMI+S
Sbjct: 140 LQLVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGKAFSTSVSKQEAELSPEMISS 199
Query: 196 GSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNF 255
GSW+ FKPYNF A G+ SGHLHPL+KVR++FRQIFL+MGFTEMPT+NF+ESSFWNF
Sbjct: 200 GSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNF 259
Query: 256 DALFQPQQHPARDAHDTFFVTDP 278
DALFQPQQHPARD HDTFF+ DP
Sbjct: 260 DALFQPQQHPARDQHDTFFLRDP 282
>sp|Q505J8|SYFA_RAT Phenylalanine--tRNA ligase alpha subunit OS=Rattus norvegicus
GN=Farsa PE=1 SV=1
Length = 508
Score = 308 bits (789), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 147/276 (53%), Positives = 198/276 (71%), Gaps = 5/276 (1%)
Query: 7 EKILKYLD-TNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWELTGEG 65
E++L+ L+ + +D+ +LA +HQ VVG +KS++ LGE + E S K WELT EG
Sbjct: 8 EQLLRRLEVADGGLDSAELATQLGVEHQAVVGAVKSLQALGEVIEAELRSTKCWELTTEG 67
Query: 66 NQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKATG---KVL 122
++ GSHE VF ++P EG+ Q EL+ P+ KVGFSKAM+ WI +DK+ +V
Sbjct: 68 EEIAREGSHEARVFRSIPLEGLVQSELM-QLPSGKVGFSKAMSNKWIRVDKSAADGPRVF 126
Query: 123 RKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLKKGPEFSTTIQ 182
R VDS+ DE+Q L+ + + +K+ E + + +KRKLL EV +K++ + KG FST++
Sbjct: 127 RVVDSIEDEVQRRLQQVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGKGFSTSVS 186
Query: 183 KPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEM 242
K E EL+PEMI+SGSW+ FKPYNF A G+ SGHLHPL+KVR++FRQIFL+MGFTEM
Sbjct: 187 KQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEM 246
Query: 243 PTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDP 278
PT+NF+ESSFWNFDALFQPQQHPARD HDTFF+ DP
Sbjct: 247 PTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDP 282
>sp|Q5ZJQ2|SYFA_CHICK Phenylalanine--tRNA ligase alpha subunit OS=Gallus gallus GN=FARSA
PE=1 SV=1
Length = 443
Score = 302 bits (774), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/286 (51%), Positives = 199/286 (69%), Gaps = 9/286 (3%)
Query: 1 MASDLTEKILKYLDTNPP-----VDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLS 55
M+ + E +L+ L+ PP + +L+ A DHQ +VG +KS++ LGE + E +
Sbjct: 1 MSPSVAELLLQRLERTPPGPEGGLCSLEAAAALGLDHQTLVGAVKSLQALGEVIEAETRA 60
Query: 56 HKIWELTGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLD 115
WEL+ EG +V +GS EV +F +VPSEG+ Q + + P A+VGFSKAMA W+ LD
Sbjct: 61 TTRWELSAEGEEVLRDGSPEVRLFRSVPSEGLPQSDAM-KLPGAQVGFSKAMANKWLRLD 119
Query: 116 K-ATG--KVLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLK 172
K A G ++ R VD+V D +Q+ L+ + + E + D K+RKLL EVT+KS+ ++
Sbjct: 120 KGAPGGPRIFRAVDAVQDVVQSSLRQVQEGNGGSLSERERTDLKRRKLLLEVTLKSYWIR 179
Query: 173 KGPEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQ 232
KG FST + + ET+LTPEMIA+GSW+ L FK YNF A+G+ GHLHPL+KVR++ RQ
Sbjct: 180 KGSAFSTAVVRQETDLTPEMIATGSWRKLPFKAYNFSALGLPPTCGHLHPLLKVRSQLRQ 239
Query: 233 IFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDP 278
IFL+MGFTEMPT+NFVESSFWNFDALFQPQQHPARD HDTFF+ DP
Sbjct: 240 IFLEMGFTEMPTDNFVESSFWNFDALFQPQQHPARDQHDTFFLQDP 285
>sp|Q9T034|SYFA_ARATH Probable phenylalanine--tRNA ligase alpha subunit OS=Arabidopsis
thaliana GN=At4g39280 PE=2 SV=3
Length = 485
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 169/282 (59%), Gaps = 14/282 (4%)
Query: 7 EKILKYLDTNPPV-DTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWELTGEG 65
E IL +L N + D+ + FN DH ++V +KS+ Y+ V+ + + W LT EG
Sbjct: 4 EAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGF-RYIDVQDIKKETWILTDEG 62
Query: 66 NQVKDNGSHEVLVFNNVPSEG-IGQKELLATFPNA--KVGFSKAMAKGWISLDKATGKVL 122
+ GS EV +F VP EG I + EL A K+G S+A W+ + K +V
Sbjct: 63 KKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGK---QVS 119
Query: 123 RKVDSVTDELQAHL-KLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLKKGPEFSTTI 181
RKV V D+++ L ++ E+DK N + K RKL+ K + +KKGP ++
Sbjct: 120 RKVKDVEDKVKGQLLQIQQGKEFDK-ESINSL--KARKLIVPQIWKGYSVKKGPNYAPER 176
Query: 182 QKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTE 241
+K T+LT E + + WK L FK YNF A G + +GHLH L+KVR +F+ IF+ MGF E
Sbjct: 177 KKVATDLTRENLQN--WKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGFEE 234
Query: 242 MPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTSET 283
MPTNN+VESSFWNFDALFQPQQHPARD+HDTFF+ P T+ T
Sbjct: 235 MPTNNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTRT 276
>sp|O42870|SYFA_SCHPO Phenylalanine--tRNA ligase alpha subunit OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=frs2 PE=3 SV=3
Length = 499
Score = 202 bits (513), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 143/230 (62%), Gaps = 8/230 (3%)
Query: 57 KIWELTGEGNQVKDNGSHEVLVFNNVPSE--GIGQKELLATFPN-AKVGFSKAMAKGWIS 113
+I+ LT EG + NGSHE V+N + + G+ EL N A +G +A GWI
Sbjct: 60 EIYNLTAEGENICANGSHEAKVYNEICASMSGLNIGELKKKLGNSAGIGQGRAFKLGWIK 119
Query: 114 LDKATGKVLRKVDSVTDELQAHLKLIANNEYDKVPEANKV-DYKKRKLLQEVTIKSFLLK 172
D K+++ DS+TDE L I E+ + ++ + D KKRKL++ I F L+
Sbjct: 120 KD--GDKLVKNTDSITDETPKVLSEI--KEHGTISDSKTLTDLKKRKLVERNKIMYFSLR 175
Query: 173 KGPEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQ 232
KGP FS I+K T+LT EMI S SW++ FK YNF A GI G LHPLMKVR EFR+
Sbjct: 176 KGPNFSLQIEKLNTDLTAEMITSRSWESAKFKSYNFAAEGIPPAGGCLHPLMKVREEFRK 235
Query: 233 IFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTSE 282
F ++GF EMPTNNFVES FWNFDALF PQQH ARDA DTFF+ P +++
Sbjct: 236 FFFELGFEEMPTNNFVESGFWNFDALFVPQQHSARDAQDTFFLKVPASTD 285
>sp|P15625|SYFA_YEAST Phenylalanine--tRNA ligase alpha subunit OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FRS2 PE=1
SV=3
Length = 503
Score = 201 bits (510), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 173/290 (59%), Gaps = 12/290 (4%)
Query: 3 SDLTEKILKYLDTNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWELT 62
SD +ILK LD + + LA Q V+ + S++ + L + ++LT
Sbjct: 2 SDFQLEILKKLDELDEIKST-LATFPQHGSQDVLSALNSLKAHNK-LEFSKVDTVTYDLT 59
Query: 63 GEGNQVKDNGSHEVLVFNNVPSEGIGQ-KELLATF-PN-AKVGFSKAMAKGWISLDKATG 119
EG Q+ + GS+E+ + + G Q K++++ P KVG ++A GWI+ + +
Sbjct: 60 KEGAQILNEGSYEIKLVKLIQELGQLQIKDVMSKLGPQVGKVGQARAFKNGWIAKNASNE 119
Query: 120 KVLRK------VDSVTDELQAHLKLIANNEY-DKVPEANKVDYKKRKLLQEVTIKSFLLK 172
L ++ +TDE Q+ L I NN + D + D KKRKL+ + I F +
Sbjct: 120 LELSAKLQNTDLNELTDETQSILAQIKNNSHLDSIDAKILNDLKKRKLIAQGKITDFNVT 179
Query: 173 KGPEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQ 232
KGPEFST + K ET+LT +M+++ ++K L FKPYNF++ G+ + SG LHPL KVR EFRQ
Sbjct: 180 KGPEFSTDLTKLETDLTSDMVSTNAYKDLKFKPYNFNSQGVQISSGALHPLNKVREEFRQ 239
Query: 233 IFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTSE 282
IF MGFTEMP+N +VE+ FWNFDAL+ PQQHPARD DTF++ DP T++
Sbjct: 240 IFFSMGFTEMPSNQYVETGFWNFDALYVPQQHPARDLQDTFYIKDPLTAD 289
>sp|C4V6K5|SYFA_NOSCE Probable phenylalanine--tRNA ligase alpha subunit OS=Nosema ceranae
(strain BRL01) GN=NCER_100038 PE=3 SV=1
Length = 474
Score = 179 bits (455), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 158/278 (56%), Gaps = 17/278 (6%)
Query: 5 LTEKILKYLDTNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWELTGE 64
L++KIL+ L + + D+ NE + V+ + S E + + E + I++LT E
Sbjct: 3 LSQKILELLKNTETIKSTDIDVRSNELYP-VLLSLASKEIIS-FTFKEQI---IYKLTEE 57
Query: 65 GNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKATGKVLRK 124
G + NGS+E ++N++ G+ ELL +G A WI K KV +
Sbjct: 58 GESILKNGSYEFNLYNSIGDNGM---ELLEV-DKYNLGKVNAFKNKWIK--KVGDKVYKS 111
Query: 125 VDSVTDELQAHLKLIANNEYDKVPEANKVDY-KKRKLLQEVTIKSFLLKKGPEFSTTIQK 183
D+V D ++ L NN +K+ + ++ KKRKL+ + + +KKGP +
Sbjct: 112 ADNVEDNVKNML----NNVTNKIYQKEEISLLKKRKLIYQAKEVVYFIKKGPLYGKDSDN 167
Query: 184 PETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMP 243
TEL +M+ SG +K LNFKPYNF+ G G LHPLMKVR E R+IFL+MGF EM
Sbjct: 168 I-TELISKMVISGEYKHLNFKPYNFNTKGNIQSQGALHPLMKVREEIRKIFLEMGFNEMT 226
Query: 244 TNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTS 281
TN FVESSFWNFD LFQPQ HP+RDAHDTFF+ P T+
Sbjct: 227 TNKFVESSFWNFDTLFQPQNHPSRDAHDTFFMKTPSTT 264
>sp|Q54KS8|SYFA_DICDI Phenylalanine--tRNA ligase alpha subunit OS=Dictyostelium
discoideum GN=phesA PE=3 SV=1
Length = 487
Score = 174 bits (440), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 151/257 (58%), Gaps = 22/257 (8%)
Query: 31 DHQKVVGGMKSIETLGEYLIVEPLSHKIWELTGEGNQVKDNGSHEVLVFNNVPSEGIGQK 90
++ VVG +KS E+L + +E + + LT G + NGS E ++N + +G+
Sbjct: 35 NYNDVVGILKSWESLNT-ISLEYIDSIVNCLTETGKDILINGSPEAKLYNILTEQGMSPA 93
Query: 91 ELLATFPNAKVGFSKAMAKGWISLDKATGKVLRKVDSVTDELQAHLKLIANNEYDKVPEA 150
+ F F A KGWI + GK+ +KV+S+ D +++ L +P+
Sbjct: 94 DANKQF--GATAFGSAKNKGWIEV--KAGKIFKKVESINDIVKSDLS---------IPDL 140
Query: 151 NKVD------YKKRKLLQEVTIKSFLLKKGPEFSTTIQKPETELTPEMIASGSWKTLNFK 204
+K+D YKK + ++E + + + KG +++ K ++LT EM+ SW+ +FK
Sbjct: 141 SKLDSKTLEQYKKSRFIEEKKLSYYRVTKGEQYNKR-SKELSDLTIEMLKDDSWEKESFK 199
Query: 205 PYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQH 264
N +AMG+ G+ HPL KV+ EF+QIFLDMGF EMPT NFVE+ FWNFDALFQPQQH
Sbjct: 200 -VNINAMGVVPEQGYRHPLNKVKNEFKQIFLDMGFEEMPTFNFVENGFWNFDALFQPQQH 258
Query: 265 PARDAHDTFFVTDPKTS 281
PAR+ DTFF+ DPKTS
Sbjct: 259 PARELQDTFFIKDPKTS 275
>sp|Q8SRG9|SYFA_ENCCU Probable phenylalanine--tRNA ligase alpha subunit
OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU07_1660
PE=3 SV=1
Length = 475
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 160/280 (57%), Gaps = 21/280 (7%)
Query: 5 LTEKILKYLDTNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWE--LT 62
+ +KI++ L V + D+ ++E H G + S+E+ G I + +E LT
Sbjct: 4 VAQKIIENLKMQDEVRSSDIDAPYSEIH----GALISLESRG---ICNVKMEESYEEVLT 56
Query: 63 GEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKATGKVL 122
EG +V+ +GS E L+ ++ +G+ +EL +G A WI + +V
Sbjct: 57 PEGEEVERSGSQEYLLLESIGEDGMSIEEL----ERHSLGKMNAFRNKWIR--REGNRVF 110
Query: 123 RKVDSVTDELQAHLKLIANNEYDKVPEANKVD-YKKRKLLQEVTIKSFLLKKGPEFSTTI 181
R V+S+ D ++ + + A +V+ +KRKL+ F+ KGP F
Sbjct: 111 RNVESIEDTVRNMVISMKRG----TASAEEVEALRKRKLVSRRKKIVFIATKGPMFFDNT 166
Query: 182 QKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTE 241
TELT EM+ GS++ L+FK YNF+A G + G +HPLMK+R +FR+IF+++GF+E
Sbjct: 167 SYV-TELTSEMVLDGSYRDLSFKHYNFNAEGNAPQCGSIHPLMKIREDFRRIFIELGFSE 225
Query: 242 MPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTS 281
M TN +VESSFWNFDALFQPQ HP+RDAHDTFF+ +P+ S
Sbjct: 226 MATNQYVESSFWNFDALFQPQNHPSRDAHDTFFLLNPELS 265
>sp|B7XI98|SYFA_ENTBH Probable phenylalanine--tRNA ligase alpha subunit OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_22775 PE=3 SV=1
Length = 488
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 133/241 (55%), Gaps = 27/241 (11%)
Query: 47 EYLIVEPLSHKIWELTGEGNQVKDNGSHE-----VLVFNNVPSEGIGQKELLATFPNAKV 101
+Y I+ P+ ++ LT +G QV+ GS E +L+ +N+ + I + L F N +
Sbjct: 43 DYTII-PIVERV--LTPQGRQVEKEGSQEYNLITMLMKSNLSIDNIDKTTLKYAFKNKWI 99
Query: 102 GFSKAMAKGWISLDKATGKVLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLL 161
M I L T + +T +L +L I+ +E++++ + VD K+ +
Sbjct: 100 ----KMENNQIVLSGTT------IQDITQKLLRNLDSISKDEFEELKKRKLVDINKKNI- 148
Query: 162 QEVTIKSFLLKKGPEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLH 221
+ + +G F+ + ELT + + + S +L K YNF+ +S G LH
Sbjct: 149 -------YKITRGENFNIEQKDIINELTTQNLFNISDTSL-LKKYNFNLSKVSRFFGSLH 200
Query: 222 PLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTS 281
PL K+++EF++IFL+MGF+EM T +VESSFWNFD+LFQPQ HP+R+ DTFF+ P+ +
Sbjct: 201 PLTKIKSEFKRIFLEMGFSEMNTGKYVESSFWNFDSLFQPQNHPSREIQDTFFLKVPRLN 260
Query: 282 E 282
+
Sbjct: 261 D 261
>sp|Q46CQ6|SYFA_METBF Phenylalanine--tRNA ligase alpha subunit OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=pheS PE=3 SV=1
Length = 492
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 59 WELTGEGNQVKDNG--SHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKA--MAKGWISL 114
+ LT EG + G +++ F P+ +EL F VG + + KGW +
Sbjct: 63 YSLTKEGTEYTKTGLPERQIIDFLKKPTS---LEELRGHFSPKMVGIATGWLVKKGWAKI 119
Query: 115 DKATGKVLRKVDSVTDE--LQAHLKLIANNEYDKVPEANKVDYKKRKLL---QEVTIKSF 169
+ KV++ DE L A E + D KRKL+ +E
Sbjct: 120 ENGVMVPSGKVNAGKDEETLAAFTGKAKTLEEIGSDQGTIKDLLKRKLVIKHEEKFRTVS 179
Query: 170 LLKKGPEFST---TIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKV 226
+ G +T +++ +LTPE++ SG+WK F+PY D SL +HP ++
Sbjct: 180 ITDAGNALATQGLVLEEEIAQLTPELLKSGAWKDKKFRPYRLDITPKSLYGAKIHPYRRL 239
Query: 227 RAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTSETEFF 286
+ RQIFL+MGF E+ ++SSFWNFDALFQPQ HPARD DTF + TE+F
Sbjct: 240 IEQMRQIFLEMGFAEI-KGGIIQSSFWNFDALFQPQDHPARDMQDTFHLNSTCELPTEYF 298
>sp|Q8PWV6|SYFA_METMA Phenylalanine--tRNA ligase alpha subunit OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pheS PE=3 SV=1
Length = 495
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 54 LSHKIWE---LTGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKA--MA 108
+S K+ E LT EG + K G E + + + + + +EL + F VG + +
Sbjct: 58 VSEKVLERYSLTKEGEEYKKTGLPERQIIDALKNP-VSLEELRSCFSPQTVGIATGWLVK 116
Query: 109 KGWISLDKATGKVLRKVDSVTDE--LQAHLKLIANNEYDKVPEANKVDYKKRKLL---QE 163
KGW ++ + DE L A E E D KRKL+ +E
Sbjct: 117 KGWAKVENGIMVPSGEASEGKDEKALSAFAGKAKTLEELGADEGTVKDLLKRKLVVKHEE 176
Query: 164 VTIKSFLLKKGPEFST---TIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHL 220
+ G E ++ +++ +LTPE++ SG+WK F+PY D L +
Sbjct: 177 KFRTVSITDAGSELASQGLVLEEEIAQLTPELLKSGAWKEKKFRPYRLDITPKPLYGTKI 236
Query: 221 HPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTF 273
HP ++ + RQIFL+MGFTE+ ++SSFWNFDALFQPQ HPARD DTF
Sbjct: 237 HPYRRLIEQMRQIFLEMGFTEI-KGGIIQSSFWNFDALFQPQDHPARDMQDTF 288
>sp|O28324|SYFA_ARCFU Phenylalanine--tRNA ligase alpha subunit OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pheS PE=3 SV=1
Length = 474
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 136/281 (48%), Gaps = 18/281 (6%)
Query: 1 MASDLTEKILKYLDTNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWE 60
M S + +L+ L+T + A+L V+ ++ G ++E + +
Sbjct: 1 MLSKIELMLLRSLETGKTYTPEEAAELSGLSKDAVLKAAYMLQERGYVRVIENVRTH-YS 59
Query: 61 LTGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKAT-- 118
LT EG + G E +++ V S G+ + L ++G +A GW+ A
Sbjct: 60 LTEEGERYLKEGLPEEKLYSLVKS-GVNSMDEL----RKRMGREFQIALGWLRRKGAVEV 114
Query: 119 --GKVLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLK--KG 174
KV+ K + DE A L A E V E KRKL+ + K ++ K
Sbjct: 115 EGDKVVPKREPSFDERAA---LQAIKEGRGVDEGTLKTLMKRKLVTKSETKQVYIEVMKK 171
Query: 175 PEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIF 234
PE ++ T+LTPEM+ G+W+ F Y+ + G +HP ++ E R++F
Sbjct: 172 PEIE--LEDIITDLTPEMLLEGTWRGKQFLKYDITIPAKEIYGGKIHPYERIIEECRKVF 229
Query: 235 LDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFV 275
L+MGFTE+ ++V+ +FWNFDALFQPQ HPARD DTF++
Sbjct: 230 LEMGFTEI-KGHYVQPAFWNFDALFQPQDHPARDMQDTFYL 269
>sp|Q8TYM5|SYFA_METKA Phenylalanine--tRNA ligase alpha subunit OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=pheS PE=3 SV=1
Length = 524
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 153/320 (47%), Gaps = 45/320 (14%)
Query: 1 MASDLTEK---ILKYLDTNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHK 57
+A LTE+ IL +L + +LA+ + D V+ + +E G + E +H+
Sbjct: 6 LAERLTERDLRILIHLAESGEATPEELAESLDVDLGPVMRSLYWLEERG-LIESEEETHE 64
Query: 58 IWELTGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAK---GWISL 114
++EL EG + + G E+ + + G G+ L A G + +A GW+
Sbjct: 65 VYELGDEGKEYAEEGLPELRIVEVLRKIG-GEGRLEEVLDRA--GVPRKLAGPVLGWLRR 121
Query: 115 ---------DKATGKVLRK----------VDSVTDELQAHLKLIANN---EYDKVPEANK 152
D T VL + ++++ E A ++ +A + ++V +A K
Sbjct: 122 KGLAEIKREDGETSLVLLEEEPEDVDQSVLEALAAEGSASVEELARKLEMDEEEVEKALK 181
Query: 153 VDYKKRKLL---QEVTIKSFLLKKGPEFSTTIQKPE-------TELTPEMIASGSWKTLN 202
++ +L +E K L ++G E + PE TEL PE + G+WK
Sbjct: 182 RLSERGDVLRAREETVKKVRLTERGEEVAE--HAPEVLERDWITELKPEHLREGTWKEKE 239
Query: 203 FKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQ 262
FKPY+ A G HPL +V E R+IFL+MGF E+ + VESSFWNFDALFQPQ
Sbjct: 240 FKPYDVKAPTSPTFPGKRHPLKEVINEIRRIFLEMGFVEV-SGPLVESSFWNFDALFQPQ 298
Query: 263 QHPARDAHDTFFVTDPKTSE 282
H AR+ DTF++ +P +E
Sbjct: 299 DHAAREMQDTFYLKEPAEAE 318
>sp|Q2FLL0|SYFA_METHJ Phenylalanine--tRNA ligase alpha subunit OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=pheS PE=3 SV=1
Length = 478
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 14/190 (7%)
Query: 93 LATFPNAKVGFSKAMAKGWISLDKATGKVLRKVDSVTDELQAHLKLIANNEYDKVPEANK 152
L T P+AK+G GW+ ++ G V++ D ++ LK D P K
Sbjct: 91 LNTHPHAKIGLGWMKRLGWVKIE--AGNVIKTGDPAPSPIELALK-----NPDAAPADIK 143
Query: 153 VDYKKRKLLQEVTIKSFLL------KKGPEFSTTIQKPETELTPEMIASGSWKTLNFKPY 206
D KR L+ E + + KK T+ + LT + I+SG+WK L+ + Y
Sbjct: 144 KDLLKRGLVTEEESVRYTITITDEGKKLAAAGITLTQETGTLTADQISSGAWKDLSLRRY 203
Query: 207 NFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPA 266
+ + G +HP ++ E R+I LDMGFTE+ + ++ +FWNFDALFQPQ HPA
Sbjct: 204 DITKHPRPVWPGKIHPYQRMIDEMRRILLDMGFTEL-HGSIIQGAFWNFDALFQPQDHPA 262
Query: 267 RDAHDTFFVT 276
R+ DTF +
Sbjct: 263 REMQDTFHLA 272
>sp|O26837|SYFA_METTH Phenylalanine--tRNA ligase alpha subunit OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pheS PE=1 SV=1
Length = 511
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 92/159 (57%), Gaps = 10/159 (6%)
Query: 124 KVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLKKGPEFSTTIQK 183
++ + DEL+ LK + + + + K+ KR ++ T LL++G E I +
Sbjct: 160 RIRELPDELRGALKDLKGRK--GIVDIRKI---KRHTIELTTEGRKLLERGIE----IVE 210
Query: 184 PETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMP 243
T++T E + SG+W+ L+++ YN DA + G +HPL ++ E R IFL +GFTE
Sbjct: 211 EATQVTHEHLKSGAWRKLHYRGYNIDAEYPLVYPGKMHPLRRIIDEIRSIFLKLGFTE-S 269
Query: 244 TNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTSE 282
VES+FWNFD LFQPQ H AR+ DTF+V +P ++
Sbjct: 270 RGPIVESAFWNFDCLFQPQDHAAREMQDTFYVKNPAVTD 308
>sp|Q8U261|SYFA_PYRFU Phenylalanine--tRNA ligase alpha subunit OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pheS
PE=3 SV=1
Length = 499
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 101/190 (53%), Gaps = 23/190 (12%)
Query: 109 KGWISLDKA-TGKVL----RKVDSVTDELQAHLKLIANNEYDKVPEANKV----DYKKRK 159
+GW+ ++K G VL R + + LK+++ EY E +K+ + K+RK
Sbjct: 111 EGWVKVEKTPEGLVLEITERGENPEERPIDKALKILSEKEYATSEEISKIVPINELKRRK 170
Query: 160 LLQE---------VTIKSF-LLKKGPEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFD 209
+ QE +T K L+KKG E + T LTPE+IASG W+ + FKP+N
Sbjct: 171 VAQEEEVVERIAEITEKGVELVKKGIELKREV----TSLTPELIASGKWREVEFKPFNIK 226
Query: 210 AMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDA 269
A + G P + R+ ++MGF E+ ++ +E+ FWNFDALFQPQ HPAR+
Sbjct: 227 APVKKIYPGKKQPYRVFLDKIRRKLIEMGFIEITVDSLIETQFWNFDALFQPQNHPAREW 286
Query: 270 HDTFFVTDPK 279
DT+ + P+
Sbjct: 287 TDTYQLKYPE 296
>sp|A4FW27|SYFA_METM5 Phenylalanine--tRNA ligase alpha subunit OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=pheS PE=3
SV=1
Length = 501
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 116/241 (48%), Gaps = 20/241 (8%)
Query: 57 KIWELTGEGNQVKDNGSHEVLVFNNVPS---EGIGQKELLATFPNAKVG--FSKAMAKGW 111
KI ELT GNQ D G E V N + E I K+L + G KG
Sbjct: 57 KICELTELGNQSLDLGIPERKVANYIKENNLESIPIKDLSKILEKDETGAALGNLKKKGL 116
Query: 112 ISLDKATGKVLRKVDSVTDELQAHLKL-----IANNEYDKVPEANKVDYKKRKLLQ--EV 164
+++DK V + +D V E + K ++N D+V + KKR L+ EV
Sbjct: 117 VAIDKGN-IVFKDLDYVDIEEEVLKKASEDFNLSNYSEDEVKIIE--NLKKRGFLKINEV 173
Query: 165 TIKSFLLKK-GPEF---STTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHL 220
+SF LK G +F I++ T+LT EMI SG W +PY+ L
Sbjct: 174 VDRSFELKNAGIDFIKKPIEIKEEITQLTREMIVSGKWNDYFIRPYDAKIPTEELYPAKA 233
Query: 221 HPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKT 280
HP+ K+ E ++ + MGF E+ + V++ FWNFD LF+PQ HPARD DTFFV P T
Sbjct: 234 HPMSKIIQEVNEVLISMGFKEVKSQ-IVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPNT 292
Query: 281 S 281
Sbjct: 293 G 293
>sp|B6YTJ4|SYFA_THEON Phenylalanine--tRNA ligase alpha subunit OS=Thermococcus onnurineus
(strain NA1) GN=pheS PE=3 SV=1
Length = 500
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 101/188 (53%), Gaps = 15/188 (7%)
Query: 109 KGWISLDKATGKVLRKV--DSVTDELQA---HLKLIANNEYDKVPEANKV----DYKKRK 159
+GW S+ K GK++ ++ + + E +A LKL+A E V E ++ D K+RK
Sbjct: 112 EGWASIRKEDGKLVLEITENGLKAEERAIDRALKLLAEKEAIPVSEIEEIIKVNDLKRRK 171
Query: 160 LLQEVTIKSFLLKKGPEF------STTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGI 213
+ +E + ++ PE +++ + LTPE+I SG W+ + FK +N A
Sbjct: 172 IAEEDIVTERTVEITPEGEELANKGLELKEEVSTLTPELIKSGKWREVEFKRFNIQAPVR 231
Query: 214 SLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTF 273
+ G P + R+ ++MGF EM ++ +E+ FWNFDALFQPQ HPAR+ DT+
Sbjct: 232 RIYPGKKQPYRAFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTY 291
Query: 274 FVTDPKTS 281
+ PK+
Sbjct: 292 QLKYPKSG 299
>sp|Q8TUA2|SYFA_METAC Phenylalanine--tRNA ligase alpha subunit OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pheS PE=3 SV=1
Length = 492
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 186 TELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTN 245
+LTPE++ SG+WK F+PY D L +HP ++ + RQIFL+MGFTE+
Sbjct: 199 AQLTPELLKSGAWKGKKFRPYRLDIAPNPLYGVKIHPYRRLIEQMRQIFLEMGFTEI-KG 257
Query: 246 NFVESSFWNFDALFQPQQHPARDAHDTF 273
++SSFWNFDALFQPQ HPARD DTF
Sbjct: 258 GIIQSSFWNFDALFQPQDHPARDMQDTF 285
>sp|A3CT76|SYFA_METMJ Phenylalanine--tRNA ligase alpha subunit OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pheS
PE=3 SV=1
Length = 481
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 99/197 (50%), Gaps = 18/197 (9%)
Query: 93 LATFPNAKVGFSKAMAKGWISLDKATGKVLRKVDSVT---DELQAHLKLIANNEYDKVPE 149
L P AK+ KGWI++ TG V++K DE A ++L E + +
Sbjct: 91 LQGHPLAKIAIGWMRKKGWIAI---TGGVVQKTGKTAPGPDE-AAFVRLAEKGE---IAD 143
Query: 150 ANKV-DYKKRKLLQE---VTIKSFLLKKGPEFSTT---IQKPETELTPEMIASGSWKTLN 202
V D KR L E V + +G E + +++ LT E I SG WK+L
Sbjct: 144 GEGVADLAKRGLAIEEETVAYTVSITPRGRELLSQGLDLREEAGTLTREQILSGEWKSLP 203
Query: 203 FKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQ 262
+ Y+ + G +HP ++ E R+I DMGF EM + V+SSFWNFDALFQPQ
Sbjct: 204 LRRYDVTKLPKRAYPGKVHPYQRIIDEMRRILFDMGFEEM-SGGIVQSSFWNFDALFQPQ 262
Query: 263 QHPARDAHDTFFVTDPK 279
HPAR+ DTFF+ + +
Sbjct: 263 DHPAREMQDTFFLGERR 279
>sp|Q6LX56|SYFA_METMP Phenylalanine--tRNA ligase alpha subunit OS=Methanococcus
maripaludis (strain S2 / LL) GN=pheS PE=3 SV=1
Length = 500
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 116/242 (47%), Gaps = 18/242 (7%)
Query: 57 KIWELTGEGNQVKDNGSHEVLVFNNVPS---EGIGQKELLATFPNAKVG--FSKAMAKGW 111
K+ EL GN+ D G E V N + E I KEL + G KG
Sbjct: 57 KLCELNELGNKSLDFGIPERKVANYIKENNLESIPIKELSKILEKDETGAALGNLKKKGL 116
Query: 112 ISLDKATGKVLRKVDSVTDELQAHLKLIANN----EYDKVPEANKVDYKKRKLL--QEVT 165
+ +DK G ++ K + D + LK ++ N Y K + KKR L +EV
Sbjct: 117 VEIDK--GNIVFKNLNYEDIEEEILKKVSINPDLSTYSKDEVKIVENLKKRGFLNLKEVV 174
Query: 166 IKSFLLK-KGPEF---STTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLH 221
+SF +K G EF I++ T+LT EMI SG WK +PY+ + H
Sbjct: 175 DRSFEIKDAGTEFIKNPIEIKEEITQLTREMIVSGKWKDYFIRPYDAKIPTEDIYPAKAH 234
Query: 222 PLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTS 281
P+ K+ E ++ + MGF E+ + V++ FWNFD LF+PQ HPARD DTFFV P T
Sbjct: 235 PMSKIIQEVNEVLISMGFKEVKSQ-IVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPNTG 293
Query: 282 ET 283
+
Sbjct: 294 KV 295
>sp|C5A5Y9|SYFA_THEGJ Phenylalanine--tRNA ligase alpha subunit OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=pheS PE=3 SV=1
Length = 499
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 14/187 (7%)
Query: 109 KGWISLDKATGKVLRKVDSVTDELQAH-----LKLIANNEYDKVPEANKV----DYKKRK 159
+GW S+ K GK++ ++ E + LKL+A V E K+ + K+RK
Sbjct: 112 EGWASVRKEDGKLILEITEKGLEAEERPIDRALKLLAEKNVVPVKEIEKLIPVKELKRRK 171
Query: 160 LLQEVTIKSFLLK---KGPEFSTTIQ--KPETELTPEMIASGSWKTLNFKPYNFDAMGIS 214
+ +E T+ ++ G E + ++ + + LTPE+I SG W+ + F+ ++ A
Sbjct: 172 IGEEETVTERTVEITPAGEELAPKVELKREVSVLTPELIKSGKWREVEFRRFDIKAPVRR 231
Query: 215 LPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFF 274
+ G P + R+ ++MGF EM ++ +E+ FWNFDALFQPQ HPAR+ DT+
Sbjct: 232 IYPGKKQPYRAFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTYQ 291
Query: 275 VTDPKTS 281
+ PK+
Sbjct: 292 LKYPKSG 298
>sp|Q76KA8|SYFA_PYRKO Phenylalanine--tRNA ligase alpha subunit OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=pheS PE=1 SV=1
Length = 501
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 15/188 (7%)
Query: 109 KGWISLDKATGKVLRKVDSVTDE-----LQAHLKLIANNEYDKVPEANKV----DYKKRK 159
+GW ++ K GK++ ++ E + LKL+A V E K+ + K+RK
Sbjct: 112 EGWANVRKEDGKLVLEITEKGREASERPIDKALKLLAERGEVPVKEIEKLVPVNELKRRK 171
Query: 160 LLQEVTIK---SFLLKKGPEF---STTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGI 213
+ +E I + + +KG E ++K + LTPE+I SG W+ + F+ ++ A
Sbjct: 172 IGEEDVITERVAEITEKGEELVKKGLELKKEVSVLTPELIKSGKWREVEFRKFDIKAPVR 231
Query: 214 SLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTF 273
+ G P + R+ ++MGF EM ++ +E+ FWNFDALFQPQ HPAR+ DT+
Sbjct: 232 RIYPGKKQPYRAFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTY 291
Query: 274 FVTDPKTS 281
+ PK
Sbjct: 292 QLKYPKVG 299
>sp|Q9UYX3|SYFA_PYRAB Phenylalanine--tRNA ligase alpha subunit OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=pheS PE=3 SV=1
Length = 500
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 86/154 (55%), Gaps = 10/154 (6%)
Query: 136 LKLIANNEYDKVPEANKV----DYKKRKLLQE---VTIKSFLLKKGPEFSTT---IQKPE 185
LKL++ V E +++ D K+RK+ +E V + +KG + + +++
Sbjct: 144 LKLLSEKGEVSVDEISRIIDVKDLKRRKIAREDERVERTVEITEKGKKLVSKGIELKREV 203
Query: 186 TELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTN 245
T LTPE+IASG W+ + KP+N A + G P + R+ ++MGF EM +
Sbjct: 204 TRLTPELIASGKWREVELKPFNIKAPVKRIYPGKKQPYRVFLDKIRRRLIEMGFIEMTVD 263
Query: 246 NFVESSFWNFDALFQPQQHPARDAHDTFFVTDPK 279
+ +E+ FWNFDALFQPQ HPAR+ DT+ + P+
Sbjct: 264 SLIETQFWNFDALFQPQNHPAREWTDTYQLKYPE 297
>sp|A4YIL1|SYFA_METS5 Phenylalanine--tRNA ligase alpha subunit OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=pheS PE=3 SV=1
Length = 465
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 136/284 (47%), Gaps = 24/284 (8%)
Query: 1 MASDLTEKILKYLDTNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWE 60
M S+ KIL +L + ++A+ V + ++E+ G ++ + K+
Sbjct: 1 MLSENEIKILDFLKRRKESTSQEIAEGTGLPLSSVFSIIATLESKGIVKVISEETRKVVR 60
Query: 61 LTGEGNQVKDNGSHE---VLVFNNVPSEGIGQKELL-ATFPNAKVGFSKAMAKGWISLDK 116
LT EG + G E V + N P + +EL A + ++GF A KG I+L+
Sbjct: 61 LTDEGKLRTEQGLPEDRLVTLLNGRP---LKIQELRNALGKDFEIGFGWARRKGLITLEN 117
Query: 117 ATGKVLRKVDS-VTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEV----TIKSFLL 171
T V+ KV V+ E A L A E P ++ R+ L EV ++ LL
Sbjct: 118 DT--VIPKVSQYVSPEYTALKDLQAGKE----PTGEVLEILLRRKLVEVKEEKMLRVQLL 171
Query: 172 KKGPEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFR 231
++ + E +T EM+ +GSW+ FKPYN +A P G H + +
Sbjct: 172 RE-----VETRPAELYVTHEMLTTGSWREYEFKPYNVEANPPFFPIGKTHYFRDFIEKVK 226
Query: 232 QIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFV 275
+ + +GF E+ + +FVE+ F+NFD LFQPQ HPAR+ HD+F +
Sbjct: 227 DLMVGLGFVEV-SGDFVETEFFNFDMLFQPQDHPAREIHDSFVI 269
>sp|P57693|SYFA_THEAC Phenylalanine--tRNA ligase alpha subunit OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=pheS PE=3 SV=1
Length = 499
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 188 LTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNF 247
L P +IASG WKT NF+ Y+ ++ + S HP+ + E R+IFL+MGFTEM ++
Sbjct: 198 LDPSIIASGEWKTKNFRKYDLNSPSSVIRSSLKHPMTYLIEEIREIFLNMGFTEM-GGHY 256
Query: 248 VESSFWNFDALFQPQQHPARDAHDTFFV 275
+ES+ W+ D+LF PQ HPARD DTF+V
Sbjct: 257 IESTLWDMDSLFIPQDHPARDMQDTFYV 284
>sp|O58391|SYFA_PYRHO Phenylalanine--tRNA ligase alpha subunit OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pheS PE=3 SV=1
Length = 499
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 18/201 (8%)
Query: 86 GIGQKELLATFPNAKVGFS-KAMAKGWISLDKATG---KVLRKVDSVTDELQAHLKLIAN 141
G+ +KE A K G + K KG + +A +VL K + +E++ K+I+
Sbjct: 107 GVLRKEGWAEVSKTKEGLTLKLSEKGKKAEKRAIDIALEVLSKGEVSVEEIE---KIISV 163
Query: 142 NEYDKVPEANKVDYKKRKLLQ--EVTIKSF-LLKKGPEFSTTIQKPETELTPEMIASGSW 198
E + K+ ++ K+++ E+T K L++KG E + + LTPE+I +G W
Sbjct: 164 KELKR----RKIAEEEEKVIRNVEITDKGLELVEKGIELKREV----SILTPELIVTGKW 215
Query: 199 KTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDAL 258
+ + FKP+N A + G P + R+ ++MGF EM ++ +E+ FWNFDAL
Sbjct: 216 REVEFKPFNIKAPVKKIYPGKKQPYRVFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDAL 275
Query: 259 FQPQQHPARDAHDTFFVTDPK 279
FQPQ HPAR+ DT+ + P+
Sbjct: 276 FQPQNHPAREWTDTYQLKYPE 296
>sp|Q57911|SYFA_METJA Phenylalanine--tRNA ligase alpha subunit OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=pheS PE=3 SV=1
Length = 480
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 15/191 (7%)
Query: 98 NAKVGFSKAMAKGWISLDKATGKVLRKVDSVTDELQAHLKLIANNEY-DKVPEANK--VD 154
NA +G K KG ++K GK++ D + L+ I N+Y D E K +D
Sbjct: 99 NAALGAIKR--KGIARIEK--GKIIFDNLDYKDVEEQLLQKIKENKYLDDFSEEEKKIID 154
Query: 155 -YKKRKLL---QEVTIKSFLLKKGPEF---STTIQKPETELTPEMIASGSWKTLNFKPYN 207
KKR + +E IK L +KG EF I++ T+LT ++I SG WK +PY+
Sbjct: 155 ILKKRGYVDFDEEKEIKIKLTEKGKEFIKNPIEIEEEITQLTRDIIISGKWKKAYIRPYD 214
Query: 208 FDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPAR 267
+ +HPL ++ E ++I L MGF E+ + VE+ FWNFD LF+PQ HPAR
Sbjct: 215 VKVPTKPIYPAKVHPLTRIIREVKEILLAMGFKEVKSP-IVETEFWNFDMLFEPQDHPAR 273
Query: 268 DAHDTFFVTDP 278
+ DTFF+ P
Sbjct: 274 EMQDTFFLKYP 284
>sp|A6VH81|SYFA_METM7 Phenylalanine--tRNA ligase alpha subunit OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=pheS PE=3
SV=1
Length = 501
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Query: 154 DYKKRKLLQ--EVTIKSFLLKK-GPEF---STTIQKPETELTPEMIASGSWKTLNFKPYN 207
+ KKR L+ EV +SF LK G +F I++ T+LT EMI SG W +PY+
Sbjct: 161 NLKKRGFLKINEVVDRSFELKSAGIDFIKNPIEIKEEITQLTREMIVSGKWNDYTIRPYD 220
Query: 208 FDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPAR 267
+ HP+ K+ E ++ + MGF E+ + V++ FWNFD LF+PQ HPAR
Sbjct: 221 AKIPTEEIYPVKAHPMSKIIQEVNEVLISMGFKEVKSQ-IVQTEFWNFDTLFEPQDHPAR 279
Query: 268 DAHDTFFVTDPKT 280
D DTFFV P T
Sbjct: 280 DMQDTFFVKYPNT 292
>sp|Q979U4|SYFA_THEVO Phenylalanine--tRNA ligase alpha subunit OS=Thermoplasma volcanium
(strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 /
GSS1) GN=pheS PE=3 SV=1
Length = 482
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 115/235 (48%), Gaps = 34/235 (14%)
Query: 61 LTGEGNQVKDNGSHEVLVFNNVPSEG-IGQKELLATFPNAKVGFSKAMAKGWIS-----L 114
LT EG + +NG E+ ++ + +G + ++L P+ +AK I+ L
Sbjct: 62 LTDEGKRYAENGLPELRAYSILKRKGKLSLRDLQEAMPDEYKIVLAQLAKFGITPKNGVL 121
Query: 115 DKATGKV----------LRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEV 164
+ + G + L +++ E+ H K N ++ KKR + + V
Sbjct: 122 EYSDGHIEAEISRRQRFLSDLNTDDQEMIEHFK----------RRKNVIEEKKRSV-RIV 170
Query: 165 TIKSFLLKKGPEFSTTIQKPET--ELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHP 222
+I S KG E + E E+ +I S +WKT F+ Y+ DA S HP
Sbjct: 171 SINS----KGLEQLNNFDQFEAIGEIDSGIITSQAWKTAPFRKYDLDAPVSPTKSYAKHP 226
Query: 223 LMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTD 277
L+ E R+IFLDMGFTEM + +++ES+ W+ DALF PQ HPARD DTF+V D
Sbjct: 227 LVYFINEIRRIFLDMGFTEM-SGHYIESALWDMDALFIPQDHPARDMQDTFYVKD 280
>sp|A6UQD9|SYFA_METVS Phenylalanine--tRNA ligase alpha subunit OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=pheS PE=3 SV=1
Length = 501
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 163 EVTIKSFLLKKGPEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHP 222
E+T+K K P I++ T++T ++I SG WK ++ +PY+ + HP
Sbjct: 179 EITVKGLEYIKNP---IEIKEEVTQITRDLIVSGKWKEVSIRPYDAKIPTEEIYPAKAHP 235
Query: 223 LMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKT 280
+ K+ E ++ MGF+E+ + V++ FWNFD LF+PQ HPARD DTFFV P T
Sbjct: 236 MSKIIEEVTEVLTSMGFSEVKSQ-IVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPDT 292
>sp|C6A236|SYFA_THESM Phenylalanine--tRNA ligase alpha subunit OS=Thermococcus sibiricus
(strain MM 739 / DSM 12597) GN=pheS PE=3 SV=1
Length = 503
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 55/92 (59%)
Query: 188 LTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNF 247
LTPE+I SG WK + FK +N A L G P + R+ ++MGF EM +
Sbjct: 208 LTPELIKSGGWKNVEFKHFNIHAPVKRLYPGKKQPYRTFLDKIRRKLIEMGFIEMTVESL 267
Query: 248 VESSFWNFDALFQPQQHPARDAHDTFFVTDPK 279
+E+ FWNFDALFQPQ HPARD DT+ + PK
Sbjct: 268 IETQFWNFDALFQPQNHPARDWTDTYQLKYPK 299
>sp|A2ST81|SYFA_METLZ Phenylalanine--tRNA ligase alpha subunit OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pheS
PE=3 SV=1
Length = 474
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 60 ELTGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKATG 119
+LT EG + G E + N++ +G L P +K+ K W+++ G
Sbjct: 60 KLTEEGEKYAKEGLPERQILNSI--DGSIPMSELTKNPLSKIAIGWLRKKNWVTIKD--G 115
Query: 120 KVLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSF---LLKKGPE 176
V ++ E + LK N P ++ KR L++ V S+ L G +
Sbjct: 116 IVFVNENTAVGEDELALK----NPVPGTPACKEL--AKRGLVEVVEKTSWKIALTTDGEK 169
Query: 177 FSTT---IQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQI 233
+ +++ LT E I SG WK+L + Y+ D + + G +HP ++ E R +
Sbjct: 170 IAKDGLDLREEVATLTREQILSGEWKSLPLRKYSIDKLPKKIYGGRVHPNQQILDEIRDL 229
Query: 234 FLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTD 277
+MGFTE + V++SFWNFD+L+QPQ HPAR+ DTF + +
Sbjct: 230 LFEMGFTEF-HGSIVQNSFWNFDSLYQPQDHPAREMQDTFHLAE 272
>sp|Q0W0X9|SYFA_UNCMA Phenylalanine--tRNA ligase alpha subunit OS=Uncultured methanogenic
archaeon RC-I GN=pheS PE=3 SV=1
Length = 495
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 112/240 (46%), Gaps = 33/240 (13%)
Query: 61 LTGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKA--MAKGWISLDKAT 118
LT EG + G E ++ + +P++GI +L FP A V + KGW +K
Sbjct: 60 LTDEGRKYAAEGLPERVIHDALPADGITLNDLKKQFPPATVNIAMGWLRQKGWAKFEKKD 119
Query: 119 GKVL---RKVDSVTDELQAHLKLIANNEYDKVPEANKV-DYKKRKLLQEVTIKSFLLK-- 172
G + +K D+ DE L I+N E K +A + D KR L++ K+ +K
Sbjct: 120 GDMFLLPQKADASADE--KMLAAISNGESQKGFDAKVIKDLLKRNLIELRETKTKFVKIT 177
Query: 173 --------KGPEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLP-----SGH 219
G E + I +LTPEMIA+GSW+ F+ ++ +SLP G
Sbjct: 178 DSGLAVKQAGIEITEEI----AQLTPEMIATGSWQGKTFRKFD-----VSLPVQTEYGGR 228
Query: 220 LHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPK 279
H L ++ ++MGF EM V++ F+ D LF PQ HPAR D F + +PK
Sbjct: 229 KHILRMGMDAVKRTLIEMGFKEM-EGPMVDAEFYVNDLLFMPQDHPARTHWDQFNLKEPK 287
>sp|P95961|SYFA_SULSO Phenylalanine--tRNA ligase alpha subunit OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pheS
PE=3 SV=2
Length = 468
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 25/283 (8%)
Query: 1 MASDLTEKILKYLDTNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWE 60
M S+ KIL +L ++++LA V+ ++ + G Y+ E S K +
Sbjct: 4 MLSENEAKILFFLKDLKKTNSVELAIKMGIPESSVLSLIELLREKG-YVKTEVKSEKHYV 62
Query: 61 LTGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNA-----KVGFSKAMAKGWISLD 115
LT EG + K++G E ++ N + GQ++ L N + S A KG I D
Sbjct: 63 LTEEGRKRKESGLPEDILINTLN----GQEKDLNEIKNILNKDFNIAISWAKRKGLI--D 116
Query: 116 KATGKVLRKVDS-VTDELQA--HLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLK 172
GKV+ KV + ++ E A +L+ +N + + + ++ K+RK+ V+++ L+K
Sbjct: 117 IKEGKVIPKVKTYMSSEYLALSNLERADSNTINLLKKRGLIEEKERKI---VSVE--LIK 171
Query: 173 KGPEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQ 232
+ E I + L E+I SG WK K YN +A H + + +
Sbjct: 172 EPKESEIGI----SNLNRELIISGEWKKYKLKKYNVEAFPPYYTISKKHYFREFLEKVKD 227
Query: 233 IFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFV 275
I + +GF E+ T ++E F+NFD LFQPQ HPAR+ HD+F V
Sbjct: 228 IMISLGFKEINTG-YIEMEFYNFDLLFQPQDHPAREIHDSFSV 269
>sp|Q971D7|SYFA_SULTO Phenylalanine--tRNA ligase alpha subunit OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=pheS
PE=3 SV=1
Length = 469
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 135/286 (47%), Gaps = 28/286 (9%)
Query: 1 MASDLTEKILKYLDTNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKIWE 60
M S+ KIL+YL D++K N + V + ++ G Y+ VE +E
Sbjct: 1 MLSENEIKILEYLSKKREASAEDISKQLNIPIESVFSISQLLKEKG-YIEVEEKKVIKYE 59
Query: 61 LTGEG-NQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKATG 119
LT EG ++K+ E LV + + KE K+G ++ GW A
Sbjct: 60 LTDEGKRRLKEGFPEEKLV------KLLDGKEKKIHELKDKLGRDFEISIGW-----AKR 108
Query: 120 KVLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRK-LLQEVTIKSFLLKKGPEFS 178
K L K+D T + L+ + E + EA K K +LQ++ + L+KK +
Sbjct: 109 KGLVKIDGDT-----VIPLVKDYEAKEEKEALINPEKANKDILQQLLNRKLLIKKEEKIL 163
Query: 179 TT--IQKP-ETE-----LTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEF 230
I++P E + LTPE++ASG WK + YN +A P G H +
Sbjct: 164 NIRLIREPLEIKPALIFLTPELLASGEWKKYALREYNVEAYPPFYPIGKKHFFKEFLERL 223
Query: 231 RQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVT 276
R + D+GF E+ +++VE F+NFD LFQ Q HPAR+ HD+F ++
Sbjct: 224 RDLMRDLGFKEV-YSDYVEIEFYNFDLLFQAQDHPAREIHDSFAIS 268
>sp|A4WHY5|SYFA_PYRAR Phenylalanine--tRNA ligase alpha subunit OS=Pyrobaculum arsenaticum
(strain DSM 13514 / JCM 11321) GN=pheS PE=3 SV=1
Length = 488
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 17/234 (7%)
Query: 49 LIVEPLSHKIWELTGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMA 108
L VE +++ELT EG + G E + +G G+ + + P A V + +A
Sbjct: 48 LQVEKKVVEVYELTEEGRRRAAEGLPEYNFLKSATCDG-GRCVVSLSHPEAGVALAN-LA 105
Query: 109 K-------GWISLDKATGKVLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLL 161
K G + LD+ T RK+ S +E Q +L + D + E + +R
Sbjct: 106 KFGVRPRGGVVELDEET---YRKILSAVEEKQRYLSALEGAPRDVLQEFARRRIVRRVER 162
Query: 162 QEVTIKSFLLKKGPEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLH 221
+ +K+ + P S + +T +T IA+G W+T KP++ P+ H
Sbjct: 163 TLIYVKAAV----PPESVRPAEVKTAITSADIATGRWRTYLLKPFDLGVEPPEYPAPVPH 218
Query: 222 PLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFV 275
+ R++ + +GF E+ +E FWNFDALFQ Q HPAR+ HDTF++
Sbjct: 219 FFNEFLDYVREVMIGLGFEEV-RGPVLEVEFWNFDALFQAQDHPAREVHDTFYI 271
>sp|Q8ZX61|SYFA_PYRAE Phenylalanine--tRNA ligase alpha subunit OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=pheS PE=3 SV=1
Length = 489
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 112/237 (47%), Gaps = 22/237 (9%)
Query: 49 LIVEPLSHKIWELTGEGNQVKDNGSHEV-LVFNNVPSEGIGQKELLATFPNAKVGFSKAM 107
L VE + +ELT EG Q G E L+ + V EG L + P A++ +
Sbjct: 48 LRVERKVIEFYELTEEGRQRAAEGLPEYKLLKSAVCREGRCTAHL-SQHPEAQIALANLA 106
Query: 108 AKGW------ISLDKATGKVLRKVDSVTDELQAHLKLIANNEYDKVPEANKVDYKKRKLL 161
G + LD+ T K K+ ++ +E Q L + PE K ++ KRKL+
Sbjct: 107 KLGVKPRGNVVELDEETYK---KIVAMLEEKQKAL----AAPHSAPPEVLK-EFIKRKLV 158
Query: 162 QEVTIKSFLLKKGPEFSTTIQKP---ETELTPEMIASGSWKTLNFKPYNFDAMGISLPSG 218
+++ +K + KP +T +T E IA+G W+ KP++ + P+
Sbjct: 159 RKIEKTQVYVKAA--VPLELVKPAEVKTVITSEDIATGRWRNYTLKPFDLNIEPPEYPAP 216
Query: 219 HLHPLMKVRAEFRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFV 275
H + R++ + +GF E+ +E FWNFDALFQ Q HPAR+ HDTF+V
Sbjct: 217 VPHFFNEFLDYVREVMIGLGFEEV-RGPVLEVEFWNFDALFQAQDHPAREVHDTFYV 272
>sp|Q9Y9I6|SYFA_AERPE Phenylalanine--tRNA ligase alpha subunit OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=pheS PE=3 SV=2
Length = 488
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 14/233 (6%)
Query: 61 LTGEGNQVKDNGSHE---VLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKA 117
LT G + G E VL E ++ A A + +A KG + + A
Sbjct: 65 LTERGRDALERGLPEEKLVLFLAGRGGEASVEEVRRALGEEAGIALGQAARKGLVVI--A 122
Query: 118 TGKVLRKVDSV-----TDELQAHLKLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLK 172
G V VD L+ L+ +A+ V + + R L++ +S +L+
Sbjct: 123 GGVVRLAVDQAEALKTITPLKKLLENVASGSKPTVGDELLREALSRGLIRREARRSIVLR 182
Query: 173 KGPEFSTTIQKPETE---LTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAE 229
+ + + E LT +M+ SG W+ L FKPYN A + H L +
Sbjct: 183 LKVNPAEALARARVEAAVLTRDMLKSGEWRRLRFKPYNVKAEPPRVLPARRHFLAEFIER 242
Query: 230 FRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFVTDPKTSE 282
R I ++GF E+ VE +NFD LFQ Q HPAR+ HD+ ++ P+ +
Sbjct: 243 LRDILRELGFREV-RGPLVELELFNFDVLFQAQDHPAREIHDSLWIKSPRRGD 294
>sp|A3MUA4|SYFA_PYRCJ Phenylalanine--tRNA ligase alpha subunit OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=pheS PE=3 SV=1
Length = 488
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Query: 116 KATGKVLRKVDSVTDELQAHL--KLIANNEYDKVPEANKVDYKKRKLLQEVTIKSFLLKK 173
K G V+ V + + A + K A + D P ++ +RKL+++V +K
Sbjct: 110 KPRGGVIELSRDVYERVLASIEEKQRALAQLDSAPPDLLQEFLRRKLVKKVEKTLIYVKA 169
Query: 174 G-PEFSTTIQKPETELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQ 232
P S + +T LT E IA+G W+ KP++ P+ H + R+
Sbjct: 170 AAPLDSVKPAEVKTALTSEDIATGRWREYYLKPFDLSIEPPQYPAPVPHFFNEFLNYVRE 229
Query: 233 IFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFV 275
+ + +GF E+ +E FWNFDALFQ Q HPAR+ HDTF+V
Sbjct: 230 VMVGLGFEEV-RGPILEVEFWNFDALFQAQDHPAREVHDTFYV 271
>sp|Q251I2|SYFA_DESHY Phenylalanine--tRNA ligase alpha subunit OS=Desulfitobacterium
hafniense (strain Y51) GN=pheS PE=3 SV=1
Length = 340
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 191 EMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVES 250
E+ + K L + + G+SLP GH HPL KV E +IFL MGF ++ +ES
Sbjct: 78 ELSQTAMLKQLEEEKLDISLPGVSLPQGHQHPLTKVIEEIEEIFLGMGF-QIAEGPEIES 136
Query: 251 SFWNFDALFQPQQHPARDAHDTFFVTD 277
++NF+AL P+ HPAR+ D+F++T+
Sbjct: 137 DYYNFEALNLPKDHPAREMQDSFYITE 163
>sp|Q4J8P9|SYFA_SULAC Phenylalanine--tRNA ligase alpha subunit OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=pheS PE=3 SV=1
Length = 465
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 123/286 (43%), Gaps = 30/286 (10%)
Query: 1 MASDLTEKILKYLDTNPPVDTLDLAKLFNEDHQKVVGGMKSIETLGEYLIVEPLSHKI-- 58
M S+ KIL YL + +++K + K +E G I E KI
Sbjct: 1 MLSENEIKILSYLKLKKKANAEEISKELGLPLSSIFSLAKLLEEKGYVKIGE---RKIIR 57
Query: 59 WELTGEGNQVKDNGSHEVLVFNNVPSEGIGQKELLATFPNAKVGFSKAMAKGWISLDKAT 118
+ELT EG + G E ++ + GQ L+ N K+G +A W A
Sbjct: 58 FELTEEGKKRLKEGFPEEILLKELN----GQPSLIEDLKN-KMGKDLEIAISW-----AR 107
Query: 119 GKVLRKVDSVTDELQAHLKLIANNEYDKVPEAN-KVDYKKRKLLQEVTIKSFLLKKG-PE 176
K L K+D + +N + EA K + K+LQE+ + + +K +
Sbjct: 108 KKNLVKIDQ-----NRVIPNTSNYTFSTEKEALLKPESADEKVLQELLSRKLITRKEESK 162
Query: 177 FSTTIQKPE-------TELTPEMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAE 229
T+ K E T+LT E++ S WK + YN +A+ P H +
Sbjct: 163 LEITLLKEEFEEQNYITQLTSELLRSKDWKKYKIREYNVEALPPYFPLAKKHFFRDFIEK 222
Query: 230 FRQIFLDMGFTEMPTNNFVESSFWNFDALFQPQQHPARDAHDTFFV 275
+ + ++GFTE+ ++E +NFD LFQ Q HPAR+ HD+F V
Sbjct: 223 LKDVMKELGFTEV-NAGYIEMELYNFDLLFQAQDHPAREIHDSFRV 267
>sp|B8G0L8|SYFA_DESHD Phenylalanine--tRNA ligase alpha subunit OS=Desulfitobacterium
hafniense (strain DCB-2 / DSM 10664) GN=pheS PE=3 SV=1
Length = 340
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 191 EMIASGSWKTLNFKPYNFDAMGISLPSGHLHPLMKVRAEFRQIFLDMGFTEMPTNNFVES 250
E+ + K L + + G+SLP GH HPL KV E +IFL MGF ++ +ES
Sbjct: 78 ELSQAAMLKQLEEEKLDISLPGVSLPRGHQHPLTKVIEEIEEIFLGMGF-QIAEGPEIES 136
Query: 251 SFWNFDALFQPQQHPARDAHDTFFVTD 277
++NF+AL P+ HPAR+ D+F++T+
Sbjct: 137 DYYNFEALNLPKDHPAREMQDSFYITE 163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,318,785
Number of Sequences: 539616
Number of extensions: 4933276
Number of successful extensions: 14184
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 13001
Number of HSP's gapped (non-prelim): 700
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)